Query 040845
Match_columns 824
No_of_seqs 757 out of 5489
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 12:22:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040845.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040845hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.2E-94 2.6E-99 887.5 59.3 777 2-811 145-957 (968)
2 PLN00113 leucine-rich repeat r 100.0 3.7E-51 8E-56 502.6 30.7 440 2-452 123-588 (968)
3 KOG1187 Serine/threonine prote 100.0 2.4E-49 5.1E-54 420.9 26.4 290 513-807 61-354 (361)
4 KOG0197 Tyrosine kinases [Sign 100.0 3.4E-48 7.3E-53 404.3 14.8 256 528-808 207-464 (468)
5 KOG0192 Tyrosine kinase specif 100.0 1.2E-46 2.6E-51 396.4 22.0 258 529-811 43-309 (362)
6 KOG0581 Mitogen-activated prot 100.0 3.2E-46 6.9E-51 371.4 17.0 252 528-801 80-335 (364)
7 KOG0575 Polo-like serine/threo 100.0 4.3E-45 9.4E-50 384.2 19.2 248 527-801 18-269 (592)
8 KOG0595 Serine/threonine-prote 100.0 4E-45 8.7E-50 366.1 17.9 201 526-733 9-218 (429)
9 KOG0615 Serine/threonine prote 100.0 2.7E-45 5.8E-50 366.4 14.9 253 526-801 171-437 (475)
10 KOG1026 Nerve growth factor re 100.0 1.3E-44 2.8E-49 395.7 17.1 259 527-808 486-765 (774)
11 KOG0593 Predicted protein kina 100.0 1.4E-44 2.9E-49 346.7 14.5 266 527-801 2-284 (396)
12 KOG0591 NIMA (never in mitosis 100.0 1.3E-45 2.8E-50 350.1 6.2 256 527-804 19-284 (375)
13 KOG0598 Ribosomal protein S6 k 100.0 1.5E-43 3.3E-48 352.3 16.5 242 526-793 24-269 (357)
14 KOG0600 Cdc2-related protein k 100.0 1.6E-43 3.5E-48 362.5 17.1 269 526-801 116-400 (560)
15 KOG0196 Tyrosine kinase, EPH ( 100.0 3.1E-44 6.7E-49 383.6 10.1 271 529-822 631-910 (996)
16 KOG0659 Cdk activating kinase 100.0 7.9E-43 1.7E-47 329.3 18.3 264 527-801 2-281 (318)
17 KOG0193 Serine/threonine prote 100.0 2.7E-43 5.9E-48 368.2 15.8 268 520-809 385-657 (678)
18 KOG0661 MAPK related serine/th 100.0 8.5E-44 1.8E-48 361.9 10.3 265 525-801 8-291 (538)
19 KOG0592 3-phosphoinositide-dep 100.0 5.4E-43 1.2E-47 361.6 15.4 254 523-801 69-338 (604)
20 KOG0198 MEKK and related serin 100.0 1.2E-42 2.7E-47 353.9 15.7 261 526-807 16-282 (313)
21 KOG4194 Membrane glycoprotein 100.0 2.2E-43 4.9E-48 365.1 8.1 396 23-428 54-455 (873)
22 KOG1095 Protein tyrosine kinas 100.0 1.8E-42 4E-47 393.0 15.8 263 527-812 692-968 (1025)
23 KOG4194 Membrane glycoprotein 100.0 1.2E-43 2.6E-48 367.1 3.3 365 24-398 81-449 (873)
24 KOG0578 p21-activated serine/t 100.0 1.3E-41 2.9E-46 355.0 16.0 250 527-801 273-523 (550)
25 KOG4721 Serine/threonine prote 100.0 3.4E-42 7.4E-47 354.8 11.3 241 532-806 129-369 (904)
26 KOG0582 Ste20-like serine/thre 100.0 1.5E-40 3.2E-45 335.7 20.8 262 526-801 25-293 (516)
27 KOG0588 Serine/threonine prote 100.0 3.4E-41 7.3E-46 355.4 14.5 250 526-803 11-265 (786)
28 KOG1094 Discoidin domain recep 100.0 1E-40 2.2E-45 345.5 17.5 264 526-805 537-804 (807)
29 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.4E-40 5.3E-45 357.8 20.9 260 526-807 6-336 (338)
30 KOG0663 Protein kinase PITSLRE 100.0 1.4E-40 3E-45 323.6 16.6 269 526-801 75-361 (419)
31 KOG0194 Protein tyrosine kinas 100.0 4.8E-41 1E-45 357.3 14.3 260 526-810 156-425 (474)
32 KOG0583 Serine/threonine prote 100.0 3.3E-40 7.2E-45 351.5 19.3 254 525-806 15-279 (370)
33 KOG0597 Serine-threonine prote 100.0 7.8E-41 1.7E-45 345.2 13.9 247 527-801 2-251 (808)
34 KOG0605 NDR and related serine 100.0 1.9E-40 4.2E-45 343.4 16.8 254 525-800 139-444 (550)
35 KOG0616 cAMP-dependent protein 100.0 3.4E-40 7.3E-45 316.2 15.8 238 526-793 43-284 (355)
36 KOG0580 Serine/threonine prote 100.0 1.2E-40 2.5E-45 310.2 11.2 249 526-802 21-274 (281)
37 PHA02988 hypothetical protein; 100.0 2.3E-39 5.1E-44 340.0 21.3 246 532-806 25-280 (283)
38 KOG0660 Mitogen-activated prot 100.0 2.7E-40 5.8E-45 327.6 13.2 273 521-801 16-310 (359)
39 KOG2052 Activin A type IB rece 100.0 1.1E-39 2.4E-44 329.1 17.2 285 517-807 201-505 (513)
40 KOG3653 Transforming growth fa 100.0 4.1E-39 8.9E-44 327.5 20.9 279 527-811 210-509 (534)
41 KOG4257 Focal adhesion tyrosin 100.0 8.4E-40 1.8E-44 340.6 15.2 257 526-807 388-651 (974)
42 KOG0611 Predicted serine/threo 100.0 7.1E-40 1.5E-44 324.9 13.6 249 526-803 52-305 (668)
43 KOG0594 Protein kinase PCTAIRE 100.0 5.3E-39 1.1E-43 320.3 18.8 273 526-805 10-308 (323)
44 KOG0201 Serine/threonine prote 100.0 3.1E-40 6.7E-45 333.5 9.6 249 527-801 13-263 (467)
45 cd05104 PTKc_Kit Catalytic dom 100.0 6.9E-39 1.5E-43 349.8 20.8 257 526-804 34-373 (375)
46 cd05096 PTKc_DDR1 Catalytic do 100.0 9.9E-39 2.1E-43 339.9 21.4 261 527-803 5-303 (304)
47 KOG2345 Serine/threonine prote 100.0 1.1E-39 2.5E-44 304.8 12.2 260 526-805 20-300 (302)
48 KOG0033 Ca2+/calmodulin-depend 100.0 6.4E-41 1.4E-45 311.7 2.8 254 526-803 10-269 (355)
49 KOG4278 Protein tyrosine kinas 100.0 9.8E-40 2.1E-44 339.3 11.9 256 526-806 266-524 (1157)
50 KOG0694 Serine/threonine prote 100.0 4.3E-39 9.4E-44 342.8 16.7 242 526-795 367-613 (694)
51 cd05106 PTKc_CSF-1R Catalytic 100.0 8.2E-39 1.8E-43 348.8 19.2 259 526-806 37-373 (374)
52 cd07848 STKc_CDKL5 Catalytic d 100.0 2.6E-38 5.7E-43 333.9 22.2 269 527-801 1-284 (287)
53 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.9E-38 6.2E-43 333.3 22.1 267 526-801 4-285 (288)
54 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.4E-38 2.9E-43 331.8 19.4 255 527-805 5-265 (266)
55 cd05612 STKc_PRKX_like Catalyt 100.0 5.4E-39 1.2E-43 339.2 16.3 246 527-802 1-255 (291)
56 PF07714 Pkinase_Tyr: Protein 100.0 5.6E-39 1.2E-43 332.9 15.2 249 531-802 3-259 (259)
57 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.7E-38 1E-42 334.3 22.7 270 526-801 4-288 (303)
58 KOG0658 Glycogen synthase kina 100.0 2.9E-39 6.2E-44 320.9 12.2 263 526-801 23-306 (364)
59 cd05108 PTKc_EGFR Catalytic do 100.0 2.2E-38 4.7E-43 339.0 20.0 261 527-811 7-274 (316)
60 cd05571 STKc_PKB Catalytic dom 100.0 1.2E-38 2.6E-43 341.6 17.6 242 533-801 1-251 (323)
61 PTZ00263 protein kinase A cata 100.0 9.5E-39 2.1E-43 343.1 16.7 246 526-801 17-271 (329)
62 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.3E-38 7.2E-43 344.9 20.8 259 526-806 36-398 (400)
63 KOG0585 Ca2+/calmodulin-depend 100.0 8.1E-39 1.7E-43 325.0 14.6 260 523-805 93-376 (576)
64 cd05631 STKc_GRK4 Catalytic do 100.0 3.1E-38 6.8E-43 332.4 19.8 250 529-801 2-261 (285)
65 cd06649 PKc_MEK2 Catalytic dom 100.0 1.1E-37 2.3E-42 335.5 23.6 265 526-802 4-302 (331)
66 cd05033 PTKc_EphR Catalytic do 100.0 8E-38 1.7E-42 326.3 21.9 257 526-805 3-265 (266)
67 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5.7E-38 1.2E-42 325.4 20.1 251 527-802 4-255 (256)
68 cd05048 PTKc_Ror Catalytic Dom 100.0 5.7E-38 1.2E-42 330.6 20.4 255 527-804 5-282 (283)
69 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.5E-38 9.7E-43 339.0 20.0 253 527-801 1-257 (333)
70 KOG0589 Serine/threonine prote 100.0 7.8E-39 1.7E-43 333.5 12.2 251 526-801 3-258 (426)
71 cd05093 PTKc_TrkB Catalytic do 100.0 1E-37 2.2E-42 329.3 20.8 259 527-808 5-282 (288)
72 cd05595 STKc_PKB_beta Catalyti 100.0 5E-38 1.1E-42 336.6 18.6 242 533-801 1-251 (323)
73 KOG0599 Phosphorylase kinase g 100.0 1E-38 2.2E-43 301.5 11.3 255 523-801 13-283 (411)
74 PTZ00426 cAMP-dependent protei 100.0 2.9E-38 6.3E-43 339.8 16.5 246 526-801 29-284 (340)
75 cd05111 PTK_HER3 Pseudokinase 100.0 1.4E-37 3E-42 326.6 20.8 261 527-811 7-274 (279)
76 cd05054 PTKc_VEGFR Catalytic d 100.0 1.2E-37 2.7E-42 335.0 20.7 260 526-807 6-335 (337)
77 cd05148 PTKc_Srm_Brk Catalytic 100.0 5.3E-38 1.1E-42 326.7 17.2 256 525-805 4-261 (261)
78 cd05593 STKc_PKB_gamma Catalyt 100.0 8.4E-38 1.8E-42 335.4 19.0 242 533-801 1-251 (328)
79 cd05049 PTKc_Trk Catalytic dom 100.0 8.9E-38 1.9E-42 328.7 18.8 255 526-803 4-279 (280)
80 cd05585 STKc_YPK1_like Catalyt 100.0 5.3E-38 1.1E-42 335.0 17.2 240 535-801 1-247 (312)
81 KOG1025 Epidermal growth facto 100.0 3.6E-38 7.7E-43 338.2 15.7 260 530-813 699-965 (1177)
82 cd05072 PTKc_Lyn Catalytic dom 100.0 1.4E-37 3E-42 323.5 19.5 255 526-805 5-261 (261)
83 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.6E-37 3.5E-42 336.1 20.7 267 528-801 1-290 (338)
84 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.3E-37 2.7E-42 322.5 18.8 252 527-803 4-256 (256)
85 KOG1989 ARK protein kinase fam 100.0 9.2E-38 2E-42 344.1 18.5 257 527-807 37-313 (738)
86 cd05094 PTKc_TrkC Catalytic do 100.0 2.7E-37 5.9E-42 326.6 21.4 260 527-809 5-286 (291)
87 KOG0610 Putative serine/threon 100.0 1.2E-37 2.6E-42 312.3 17.4 253 527-801 77-392 (459)
88 KOG0472 Leucine-rich repeat pr 100.0 4.3E-42 9.2E-47 341.1 -14.4 424 2-448 50-541 (565)
89 cd05084 PTKc_Fes Catalytic dom 100.0 2.1E-37 4.5E-42 320.4 19.6 248 533-803 1-251 (252)
90 cd06650 PKc_MEK1 Catalytic dom 100.0 6E-37 1.3E-41 329.6 23.7 264 526-801 4-299 (333)
91 PHA03212 serine/threonine kina 100.0 4.3E-37 9.4E-42 336.1 22.8 264 526-801 91-376 (391)
92 PTZ00267 NIMA-related protein 100.0 2.1E-37 4.5E-42 348.4 20.7 251 528-801 68-323 (478)
93 cd05052 PTKc_Abl Catalytic dom 100.0 2.5E-37 5.4E-42 321.9 19.8 254 527-805 6-262 (263)
94 cd05068 PTKc_Frk_like Catalyti 100.0 4E-37 8.6E-42 320.0 21.3 254 526-804 5-260 (261)
95 cd05059 PTKc_Tec_like Catalyti 100.0 2.9E-37 6.4E-42 320.0 20.1 251 527-802 4-255 (256)
96 cd06646 STKc_MAP4K5 Catalytic 100.0 4.5E-37 9.7E-42 320.9 21.4 254 527-802 9-266 (267)
97 cd05628 STKc_NDR1 Catalytic do 100.0 2.9E-37 6.3E-42 336.4 20.5 254 527-801 1-293 (363)
98 cd05599 STKc_NDR_like Catalyti 100.0 1.2E-37 2.6E-42 340.2 17.5 253 527-801 1-296 (364)
99 cd05062 PTKc_IGF-1R Catalytic 100.0 2.2E-37 4.8E-42 324.9 18.8 256 525-803 4-276 (277)
100 cd05584 STKc_p70S6K Catalytic 100.0 1.9E-37 4E-42 332.4 18.5 242 533-801 2-256 (323)
101 cd05090 PTKc_Ror1 Catalytic do 100.0 3.2E-37 6.9E-42 324.8 19.7 255 527-804 5-282 (283)
102 cd08228 STKc_Nek6 Catalytic do 100.0 8.1E-37 1.8E-41 318.9 22.6 258 527-806 2-266 (267)
103 cd05626 STKc_LATS2 Catalytic d 100.0 2.7E-37 5.8E-42 338.8 19.7 253 528-801 2-305 (381)
104 cd05601 STKc_CRIK Catalytic do 100.0 7.9E-38 1.7E-42 336.8 15.1 253 527-801 1-263 (330)
105 KOG1024 Receptor-like protein 100.0 6.9E-38 1.5E-42 310.0 13.2 267 524-813 281-563 (563)
106 cd07862 STKc_CDK6 Catalytic do 100.0 9.5E-37 2.1E-41 322.5 22.7 267 527-801 1-287 (290)
107 cd05107 PTKc_PDGFR_beta Cataly 100.0 5.8E-37 1.3E-41 334.8 21.5 259 526-806 36-400 (401)
108 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 5.9E-37 1.3E-41 323.0 20.8 270 527-805 4-283 (284)
109 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.1E-37 2.5E-42 338.9 15.8 253 527-801 1-285 (350)
110 cd05109 PTKc_HER2 Catalytic do 100.0 5.8E-37 1.3E-41 322.1 20.5 260 526-809 6-272 (279)
111 PLN00034 mitogen-activated pro 100.0 3.5E-37 7.5E-42 334.6 19.3 248 527-801 74-328 (353)
112 cd05594 STKc_PKB_alpha Catalyt 100.0 1.2E-37 2.7E-42 334.2 15.5 242 533-801 1-252 (325)
113 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 8.6E-37 1.9E-41 321.6 21.5 268 528-806 4-282 (283)
114 cd05589 STKc_PKN Catalytic dom 100.0 3.2E-37 7E-42 330.9 18.6 245 529-801 1-257 (324)
115 cd05092 PTKc_TrkA Catalytic do 100.0 4.8E-37 1E-41 322.7 19.3 255 527-804 5-280 (280)
116 cd05053 PTKc_FGFR Catalytic do 100.0 2.5E-37 5.5E-42 327.4 17.3 259 525-806 10-292 (293)
117 cd05043 PTK_Ryk Pseudokinase d 100.0 5.1E-37 1.1E-41 322.8 19.4 260 526-808 5-279 (280)
118 KOG0199 ACK and related non-re 100.0 5.6E-38 1.2E-42 331.1 12.0 251 530-804 113-371 (1039)
119 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.7E-37 1.4E-41 325.8 20.3 260 526-808 14-299 (304)
120 PTZ00283 serine/threonine prot 100.0 2.7E-37 5.8E-42 347.2 18.1 256 523-801 28-297 (496)
121 cd05629 STKc_NDR_like_fungal C 100.0 2.6E-37 5.7E-42 338.8 17.6 253 527-801 1-305 (377)
122 cd05614 STKc_MSK2_N N-terminal 100.0 4.1E-37 8.9E-42 331.5 18.8 252 528-801 1-267 (332)
123 cd05587 STKc_cPKC Catalytic do 100.0 4E-37 8.6E-42 330.2 18.6 247 528-801 1-257 (324)
124 cd05098 PTKc_FGFR1 Catalytic d 100.0 5.8E-37 1.3E-41 326.6 19.7 260 526-808 17-302 (307)
125 cd05590 STKc_nPKC_eta Catalyti 100.0 3E-37 6.5E-42 330.1 17.5 242 533-801 1-253 (320)
126 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.1E-37 8.9E-42 322.8 18.2 255 526-803 5-276 (277)
127 cd05592 STKc_nPKC_theta_delta 100.0 4.4E-37 9.6E-42 328.2 18.6 241 533-800 1-247 (316)
128 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.2E-36 2.6E-41 324.5 21.8 269 526-801 5-286 (309)
129 cd05061 PTKc_InsR Catalytic do 100.0 5E-37 1.1E-41 324.0 18.6 262 525-809 4-282 (288)
130 cd05103 PTKc_VEGFR2 Catalytic 100.0 1E-36 2.2E-41 329.4 21.3 260 526-807 6-341 (343)
131 cd05045 PTKc_RET Catalytic dom 100.0 7.6E-37 1.7E-41 323.1 19.8 257 528-807 1-288 (290)
132 cd05591 STKc_nPKC_epsilon Cata 100.0 3.1E-37 6.8E-42 330.5 16.9 242 533-801 1-254 (321)
133 cd05055 PTKc_PDGFR Catalytic d 100.0 1.2E-36 2.6E-41 322.9 21.3 258 526-805 34-301 (302)
134 cd05035 PTKc_Axl_like Catalyti 100.0 1.4E-36 3.1E-41 318.2 21.5 254 529-805 1-272 (273)
135 cd05099 PTKc_FGFR4 Catalytic d 100.0 1E-36 2.2E-41 325.7 20.6 267 526-815 11-303 (314)
136 cd05618 STKc_aPKC_iota Catalyt 100.0 4.5E-37 9.9E-42 329.9 17.8 248 533-801 1-262 (329)
137 cd05089 PTKc_Tie1 Catalytic do 100.0 1.1E-36 2.3E-41 322.9 20.4 260 527-812 2-282 (297)
138 KOG4279 Serine/threonine prote 100.0 1.2E-37 2.6E-42 327.8 12.8 244 534-800 582-831 (1226)
139 cd05596 STKc_ROCK Catalytic do 100.0 5.4E-37 1.2E-41 334.2 18.6 253 526-801 42-304 (370)
140 cd05588 STKc_aPKC Catalytic do 100.0 5.6E-37 1.2E-41 329.4 18.2 248 533-801 1-262 (329)
141 cd05620 STKc_nPKC_delta Cataly 100.0 5.2E-37 1.1E-41 327.7 17.8 241 533-800 1-247 (316)
142 KOG0032 Ca2+/calmodulin-depend 100.0 1.1E-36 2.4E-41 323.9 20.1 252 525-801 33-293 (382)
143 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.2E-36 2.5E-41 316.3 19.9 253 526-804 5-259 (260)
144 cd05619 STKc_nPKC_theta Cataly 100.0 7.3E-37 1.6E-41 326.3 18.8 241 533-800 1-247 (316)
145 cd05071 PTKc_Src Catalytic dom 100.0 1.9E-36 4.1E-41 314.9 21.4 254 526-805 5-260 (262)
146 cd05091 PTKc_Ror2 Catalytic do 100.0 6.1E-37 1.3E-41 322.8 17.8 255 527-804 5-282 (283)
147 cd05075 PTKc_Axl Catalytic dom 100.0 1.3E-36 2.8E-41 318.4 20.2 254 529-805 1-271 (272)
148 cd05065 PTKc_EphR_B Catalytic 100.0 9E-37 2E-41 318.9 18.9 256 527-805 4-268 (269)
149 cd05115 PTKc_Zap-70 Catalytic 100.0 1.3E-36 2.8E-41 315.1 19.8 247 535-805 3-255 (257)
150 cd05625 STKc_LATS1 Catalytic d 100.0 5.8E-37 1.3E-41 336.7 18.1 252 528-801 2-305 (382)
151 cd06625 STKc_MEKK3_like Cataly 100.0 2E-36 4.4E-41 315.2 21.2 252 527-801 2-260 (263)
152 cd05598 STKc_LATS Catalytic do 100.0 3.3E-37 7.2E-42 338.1 16.0 252 528-801 2-301 (376)
153 cd05570 STKc_PKC Catalytic dom 100.0 6.5E-37 1.4E-41 327.4 17.9 242 533-801 1-252 (318)
154 KOG0574 STE20-like serine/thre 100.0 5.9E-39 1.3E-43 306.7 1.7 249 529-802 35-284 (502)
155 cd05608 STKc_GRK1 Catalytic do 100.0 1.6E-36 3.4E-41 318.6 20.1 245 535-801 1-257 (280)
156 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.1E-36 4.6E-41 314.4 20.8 253 526-804 5-259 (260)
157 cd05621 STKc_ROCK2 Catalytic d 100.0 6.9E-37 1.5E-41 332.9 17.7 254 525-801 41-304 (370)
158 cd06643 STKc_SLK Catalytic dom 100.0 1.6E-36 3.4E-41 319.4 19.9 251 529-802 7-263 (282)
159 cd05116 PTKc_Syk Catalytic dom 100.0 2.1E-36 4.6E-41 313.7 20.6 247 534-805 2-255 (257)
160 cd05066 PTKc_EphR_A Catalytic 100.0 1.7E-36 3.6E-41 316.4 19.8 256 527-805 4-266 (267)
161 PRK13184 pknD serine/threonine 100.0 2.6E-36 5.7E-41 346.2 23.1 260 527-807 2-292 (932)
162 cd05097 PTKc_DDR_like Catalyti 100.0 1.2E-36 2.7E-41 322.2 19.0 261 527-803 5-294 (295)
163 PTZ00036 glycogen synthase kin 100.0 1.8E-36 3.9E-41 336.6 21.0 264 526-801 65-351 (440)
164 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 5.3E-36 1.2E-40 312.8 23.4 258 527-806 2-266 (267)
165 cd05616 STKc_cPKC_beta Catalyt 100.0 8.8E-37 1.9E-41 327.3 17.8 247 528-801 1-257 (323)
166 cd05057 PTKc_EGFR_like Catalyt 100.0 2.6E-36 5.7E-41 317.2 21.0 261 527-811 7-274 (279)
167 cd06612 STKc_MST1_2 Catalytic 100.0 2.5E-36 5.5E-41 313.1 20.6 250 527-801 3-253 (256)
168 cd05056 PTKc_FAK Catalytic dom 100.0 2.8E-36 6E-41 315.4 21.1 257 527-808 6-268 (270)
169 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.7E-36 5.9E-41 315.1 20.9 257 526-805 4-267 (268)
170 cd05085 PTKc_Fer Catalytic dom 100.0 2.2E-36 4.9E-41 312.3 20.0 247 533-803 1-249 (250)
171 cd05605 STKc_GRK4_like Catalyt 100.0 1.6E-36 3.5E-41 319.4 19.2 251 528-801 1-261 (285)
172 cd05041 PTKc_Fes_like Catalyti 100.0 2.6E-36 5.6E-41 312.0 20.5 248 533-803 1-250 (251)
173 cd06654 STKc_PAK1 Catalytic do 100.0 2.9E-36 6.2E-41 319.2 21.1 250 527-801 20-270 (296)
174 cd06644 STKc_STK10_LOK Catalyt 100.0 3.5E-36 7.6E-41 318.4 21.8 252 527-801 12-269 (292)
175 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.9E-36 4.2E-41 319.0 19.6 269 528-805 5-283 (284)
176 cd05607 STKc_GRK7 Catalytic do 100.0 3.8E-36 8.3E-41 315.1 21.8 247 535-803 1-252 (277)
177 cd05051 PTKc_DDR Catalytic dom 100.0 2.3E-36 4.9E-41 320.7 20.3 262 526-803 4-295 (296)
178 cd06613 STKc_MAP4K3_like Catal 100.0 5.1E-36 1.1E-40 312.0 22.6 254 527-801 3-260 (262)
179 cd08229 STKc_Nek7 Catalytic do 100.0 3E-36 6.6E-41 314.6 20.7 258 527-806 2-266 (267)
180 cd05032 PTKc_InsR_like Catalyt 100.0 1.6E-36 3.5E-41 318.5 18.6 255 526-803 5-276 (277)
181 cd06624 STKc_ASK Catalytic dom 100.0 4E-36 8.6E-41 313.8 21.2 256 523-801 4-265 (268)
182 cd05069 PTKc_Yes Catalytic dom 100.0 4.7E-36 1E-40 311.7 21.4 252 527-804 6-259 (260)
183 cd05034 PTKc_Src_like Catalyti 100.0 3.5E-36 7.5E-41 313.0 20.4 254 526-804 5-260 (261)
184 PHA03211 serine/threonine kina 100.0 3.4E-36 7.4E-41 332.4 21.4 266 526-801 168-455 (461)
185 cd05039 PTKc_Csk_like Catalyti 100.0 4.3E-36 9.2E-41 311.4 20.9 249 526-804 5-255 (256)
186 cd08529 STKc_FA2-like Catalyti 100.0 4.3E-36 9.3E-41 311.4 20.9 249 528-801 1-253 (256)
187 cd05088 PTKc_Tie2 Catalytic do 100.0 2.1E-36 4.4E-41 321.5 18.8 257 526-808 6-283 (303)
188 cd05582 STKc_RSK_N N-terminal 100.0 4.3E-37 9.3E-42 329.1 13.7 238 533-797 2-245 (318)
189 cd05082 PTKc_Csk Catalytic dom 100.0 3.4E-36 7.3E-41 312.1 19.8 248 527-805 6-256 (256)
190 cd06645 STKc_MAP4K3 Catalytic 100.0 3.5E-36 7.6E-41 314.1 20.0 253 527-801 9-265 (267)
191 cd05095 PTKc_DDR2 Catalytic do 100.0 2.8E-36 6.1E-41 319.6 19.6 262 527-804 5-296 (296)
192 cd00192 PTKc Catalytic domain 100.0 3.3E-36 7.1E-41 313.3 19.7 248 533-803 1-262 (262)
193 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.8E-36 8.2E-41 312.4 20.0 239 533-802 1-261 (262)
194 cd06611 STKc_SLK_like Catalyti 100.0 2.2E-36 4.7E-41 318.0 18.4 253 526-801 4-262 (280)
195 cd05110 PTKc_HER4 Catalytic do 100.0 2.6E-36 5.6E-41 320.9 19.0 261 527-811 7-274 (303)
196 cd07853 STKc_NLK Catalytic dom 100.0 3.9E-36 8.5E-41 328.9 21.0 266 528-801 1-288 (372)
197 PHA03207 serine/threonine kina 100.0 2.1E-36 4.5E-41 332.6 18.9 266 526-801 91-375 (392)
198 cd05050 PTKc_Musk Catalytic do 100.0 3.1E-36 6.8E-41 318.1 19.4 256 526-804 4-288 (288)
199 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.5E-36 1.2E-40 318.3 21.3 268 526-801 5-286 (301)
200 cd05575 STKc_SGK Catalytic dom 100.0 1.4E-36 3E-41 325.8 16.8 237 533-796 1-242 (323)
201 cd05622 STKc_ROCK1 Catalytic d 100.0 2.1E-36 4.6E-41 329.4 18.6 258 522-802 38-305 (371)
202 cd07876 STKc_JNK2 Catalytic do 100.0 5.7E-36 1.2E-40 326.1 21.9 267 524-802 18-316 (359)
203 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.4E-36 9.4E-41 316.5 20.4 271 527-805 4-283 (284)
204 cd05058 PTKc_Met_Ron Catalytic 100.0 4.3E-36 9.3E-41 312.5 19.9 252 533-807 1-261 (262)
205 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.5E-36 9.7E-41 323.6 20.6 260 527-809 12-297 (334)
206 cd05615 STKc_cPKC_alpha Cataly 100.0 2.5E-36 5.5E-41 323.4 18.4 241 528-795 1-246 (323)
207 KOG0444 Cytoskeletal regulator 100.0 4.5E-39 9.8E-44 334.9 -2.9 372 20-431 6-381 (1255)
208 cd05627 STKc_NDR2 Catalytic do 100.0 1.5E-36 3.1E-41 330.7 16.5 253 527-801 1-293 (360)
209 cd05040 PTKc_Ack_like Catalyti 100.0 3.9E-36 8.4E-41 311.9 18.9 248 533-803 1-256 (257)
210 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.6E-36 5.7E-41 323.9 18.1 248 533-801 1-260 (327)
211 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 7.5E-36 1.6E-40 311.9 21.0 252 533-803 1-268 (269)
212 cd05112 PTKc_Itk Catalytic dom 100.0 6.3E-36 1.4E-40 310.1 20.2 251 527-802 4-255 (256)
213 cd06637 STKc_TNIK Catalytic do 100.0 3.4E-36 7.4E-41 315.1 18.3 252 525-801 4-269 (272)
214 KOG0667 Dual-specificity tyros 100.0 2E-36 4.3E-41 323.0 16.5 194 528-731 187-390 (586)
215 cd06615 PKc_MEK Catalytic doma 100.0 1.4E-35 3E-40 315.9 23.1 265 527-803 1-289 (308)
216 cd06631 STKc_YSK4 Catalytic do 100.0 8E-36 1.7E-40 311.0 20.8 252 528-801 1-262 (265)
217 KOG0596 Dual specificity; seri 100.0 9.1E-37 2E-41 315.3 13.4 253 527-801 361-627 (677)
218 cd06655 STKc_PAK2 Catalytic do 100.0 6.8E-36 1.5E-40 316.2 20.5 250 527-801 19-269 (296)
219 cd05597 STKc_DMPK_like Catalyt 100.0 1E-35 2.2E-40 319.9 21.9 255 527-801 1-266 (331)
220 cd08219 STKc_Nek3 Catalytic do 100.0 5.1E-36 1.1E-40 310.6 18.9 249 528-801 1-252 (255)
221 PF00069 Pkinase: Protein kina 100.0 2.6E-36 5.6E-41 313.8 16.7 253 529-801 1-257 (260)
222 cd05060 PTKc_Syk_like Catalyti 100.0 8.7E-36 1.9E-40 309.2 20.6 249 533-806 1-256 (257)
223 KOG0472 Leucine-rich repeat pr 100.0 4.1E-40 8.8E-45 327.0 -11.4 422 3-446 74-562 (565)
224 cd05602 STKc_SGK1 Catalytic do 100.0 2E-36 4.2E-41 324.9 16.0 240 533-799 1-245 (325)
225 cd07874 STKc_JNK3 Catalytic do 100.0 6.1E-36 1.3E-40 325.5 19.9 267 524-801 14-311 (355)
226 cd06628 STKc_MAPKKK_Byr2_like 100.0 8.9E-36 1.9E-40 311.1 20.4 250 528-801 1-264 (267)
227 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.4E-36 1.2E-40 313.4 18.7 238 534-802 2-273 (274)
228 cd06656 STKc_PAK3 Catalytic do 100.0 1E-35 2.2E-40 315.2 20.7 251 526-801 18-269 (297)
229 cd06619 PKc_MKK5 Catalytic dom 100.0 1E-35 2.2E-40 312.4 20.6 249 527-801 1-253 (279)
230 KOG0577 Serine/threonine prote 100.0 2.6E-37 5.6E-42 320.1 8.2 245 529-802 28-279 (948)
231 cd05630 STKc_GRK6 Catalytic do 100.0 1.3E-35 2.7E-40 312.5 21.0 250 529-801 2-261 (285)
232 cd05604 STKc_SGK3 Catalytic do 100.0 2E-36 4.3E-41 324.9 15.1 239 533-798 1-244 (325)
233 KOG4717 Serine/threonine prote 100.0 2.7E-36 5.9E-41 307.8 15.1 248 527-801 18-270 (864)
234 cd07863 STKc_CDK4 Catalytic do 100.0 1.9E-35 4E-40 312.4 21.9 266 528-801 1-285 (288)
235 cd05047 PTKc_Tie Catalytic dom 100.0 9.6E-36 2.1E-40 311.1 19.5 248 533-806 1-269 (270)
236 cd07868 STKc_CDK8 Catalytic do 100.0 2.2E-35 4.9E-40 316.2 22.9 194 532-731 6-218 (317)
237 PHA03209 serine/threonine kina 100.0 7.2E-36 1.6E-40 324.3 19.2 263 526-801 65-351 (357)
238 cd05073 PTKc_Hck Catalytic dom 100.0 1.1E-35 2.4E-40 308.8 19.8 253 526-804 5-259 (260)
239 cd05603 STKc_SGK2 Catalytic do 100.0 3.4E-36 7.3E-41 322.7 16.1 237 533-796 1-242 (321)
240 cd05632 STKc_GRK5 Catalytic do 100.0 1.4E-35 3E-40 312.3 20.4 250 529-801 2-261 (285)
241 cd07839 STKc_CDK5 Catalytic do 100.0 1E-35 2.2E-40 313.7 19.1 268 528-801 1-281 (284)
242 cd06638 STKc_myosinIIIA Cataly 100.0 1E-35 2.2E-40 314.1 18.8 261 518-802 9-284 (286)
243 PTZ00284 protein kinase; Provi 100.0 1.8E-35 4E-40 332.7 22.0 268 522-801 124-438 (467)
244 cd05044 PTKc_c-ros Catalytic d 100.0 9.9E-36 2.2E-40 311.1 18.5 248 533-803 1-268 (269)
245 cd06640 STKc_MST4 Catalytic do 100.0 4.1E-35 9E-40 307.6 23.0 248 527-801 4-253 (277)
246 cd05623 STKc_MRCK_alpha Cataly 100.0 1.1E-35 2.3E-40 320.0 18.9 255 527-801 1-266 (332)
247 cd06609 STKc_MST3_like Catalyt 100.0 1.9E-35 4E-40 309.9 20.0 249 527-801 1-251 (274)
248 cd07875 STKc_JNK1 Catalytic do 100.0 1.8E-35 3.9E-40 322.8 20.7 267 524-801 21-318 (364)
249 cd07861 STKc_CDK1_euk Catalyti 100.0 3.3E-35 7.1E-40 310.0 21.9 267 528-801 1-282 (285)
250 cd08227 PK_STRAD_alpha Pseudok 100.0 2.3E-35 4.9E-40 317.1 20.7 267 531-801 2-307 (327)
251 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.8E-35 1E-39 308.9 22.8 267 527-801 1-283 (286)
252 cd06651 STKc_MEKK3 Catalytic d 100.0 3.6E-35 7.7E-40 306.2 21.5 251 527-801 2-261 (266)
253 cd05046 PTK_CCK4 Pseudokinase 100.0 2.1E-35 4.5E-40 309.7 19.7 254 527-803 5-274 (275)
254 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.1E-35 4.6E-40 319.7 20.3 267 522-801 10-298 (343)
255 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.8E-36 1E-40 311.2 14.5 239 533-802 1-257 (258)
256 cd07870 STKc_PFTAIRE2 Catalyti 100.0 6.1E-35 1.3E-39 308.8 22.9 271 525-801 3-288 (291)
257 cd05042 PTKc_Aatyk Catalytic d 100.0 5.2E-35 1.1E-39 305.6 21.9 250 534-802 2-267 (269)
258 KOG0579 Ste20-like serine/thre 100.0 6.5E-37 1.4E-41 318.9 7.3 250 529-801 34-289 (1187)
259 cd05624 STKc_MRCK_beta Catalyt 100.0 1.4E-35 3E-40 318.9 17.8 255 527-801 1-266 (331)
260 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 6.1E-35 1.3E-39 303.3 21.9 237 533-802 1-258 (259)
261 cd07832 STKc_CCRK Catalytic do 100.0 5.2E-35 1.1E-39 308.7 21.6 267 528-801 1-282 (286)
262 cd05083 PTKc_Chk Catalytic dom 100.0 2.3E-35 5E-40 305.4 18.5 246 527-804 6-253 (254)
263 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.7E-35 3.6E-40 310.7 17.6 247 528-801 5-253 (277)
264 cd06632 STKc_MEKK1_plant Catal 100.0 3.6E-35 7.8E-40 304.8 20.0 248 528-801 1-255 (258)
265 KOG0666 Cyclin C-dependent kin 100.0 3.8E-36 8.3E-41 289.3 11.4 273 526-802 23-338 (438)
266 smart00219 TyrKc Tyrosine kina 100.0 3.9E-35 8.5E-40 304.5 20.0 250 529-802 1-258 (258)
267 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.9E-35 6.3E-40 309.8 19.2 259 518-801 7-279 (282)
268 cd06610 STKc_OSR1_SPAK Catalyt 100.0 7.6E-35 1.6E-39 304.1 22.1 257 527-801 1-264 (267)
269 KOG0444 Cytoskeletal regulator 100.0 2.8E-38 6.1E-43 329.0 -3.8 376 2-418 12-392 (1255)
270 cd05086 PTKc_Aatyk2 Catalytic 100.0 9.6E-35 2.1E-39 303.2 22.6 251 534-803 2-267 (268)
271 cd06605 PKc_MAPKK Catalytic do 100.0 4.1E-35 8.8E-40 305.8 19.6 254 527-801 1-257 (265)
272 cd08221 STKc_Nek9 Catalytic do 100.0 7.6E-35 1.6E-39 302.0 21.5 250 528-802 1-254 (256)
273 cd06652 STKc_MEKK2 Catalytic d 100.0 6.7E-35 1.4E-39 304.0 21.2 251 527-801 2-261 (265)
274 cd06639 STKc_myosinIIIB Cataly 100.0 4.3E-35 9.3E-40 310.0 19.9 260 518-801 13-287 (291)
275 PTZ00266 NIMA-related protein 100.0 1.3E-35 2.8E-40 341.6 17.1 255 524-801 10-295 (1021)
276 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.3E-35 7E-40 310.1 18.9 252 527-801 1-262 (286)
277 cd07846 STKc_CDKL2_3 Catalytic 100.0 3E-35 6.5E-40 310.4 18.4 268 527-801 1-283 (286)
278 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.8E-35 1.5E-39 305.3 20.9 255 528-801 2-269 (272)
279 cd07844 STKc_PCTAIRE_like Cata 100.0 9.1E-35 2E-39 307.5 22.0 270 526-801 4-288 (291)
280 cd08218 STKc_Nek1 Catalytic do 100.0 4.8E-35 1E-39 303.5 19.3 249 528-801 1-253 (256)
281 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.8E-35 6E-40 310.2 17.7 257 527-804 5-269 (284)
282 cd08223 STKc_Nek4 Catalytic do 100.0 9.6E-35 2.1E-39 301.5 21.4 249 528-801 1-254 (257)
283 KOG0200 Fibroblast/platelet-de 100.0 4.2E-35 9.1E-40 335.1 20.5 260 526-807 295-581 (609)
284 cd08528 STKc_Nek10 Catalytic d 100.0 8.5E-35 1.8E-39 304.0 20.8 251 528-803 1-268 (269)
285 cd05074 PTKc_Tyro3 Catalytic d 100.0 5.3E-35 1.2E-39 306.3 19.2 254 529-805 1-272 (273)
286 cd07867 STKc_CDC2L6 Catalytic 100.0 1.8E-34 3.8E-39 309.4 23.3 194 532-731 6-218 (317)
287 cd06647 STKc_PAK_I Catalytic d 100.0 8E-35 1.7E-39 307.7 20.4 250 527-801 19-269 (293)
288 cd06608 STKc_myosinIII_like Ca 100.0 9.1E-35 2E-39 304.9 20.4 253 525-801 4-272 (275)
289 cd06626 STKc_MEKK4 Catalytic d 100.0 1.7E-34 3.7E-39 300.9 22.2 253 528-801 1-261 (264)
290 cd06658 STKc_PAK5 Catalytic do 100.0 2.8E-35 6.1E-40 310.9 16.4 248 529-801 24-272 (292)
291 cd07841 STKc_CDK7 Catalytic do 100.0 1.5E-34 3.2E-39 307.0 22.0 266 528-801 1-282 (298)
292 cd05580 STKc_PKA Catalytic dom 100.0 6.9E-35 1.5E-39 308.0 19.2 245 527-801 1-254 (290)
293 cd05609 STKc_MAST Catalytic do 100.0 1.1E-34 2.4E-39 308.7 20.6 256 527-804 1-273 (305)
294 cd06630 STKc_MEKK1 Catalytic d 100.0 1.1E-34 2.3E-39 303.1 19.9 254 528-801 1-264 (268)
295 cd07833 STKc_CDKL Catalytic do 100.0 1.4E-34 3E-39 305.8 20.8 269 527-801 1-285 (288)
296 cd08220 STKc_Nek8 Catalytic do 100.0 1.2E-34 2.6E-39 300.5 20.0 248 528-801 1-253 (256)
297 cd05586 STKc_Sck1_like Catalyt 100.0 1.3E-35 2.7E-40 319.5 13.1 241 535-801 1-253 (330)
298 KOG4645 MAPKKK (MAP kinase kin 100.0 1.1E-36 2.3E-41 343.0 4.7 257 522-801 1230-1494(1509)
299 cd06659 STKc_PAK6 Catalytic do 100.0 6.5E-35 1.4E-39 308.9 17.9 248 529-801 23-271 (297)
300 cd06607 STKc_TAO Catalytic dom 100.0 2.7E-34 5.9E-39 306.0 22.8 247 527-802 15-268 (307)
301 cd06614 STKc_PAK Catalytic dom 100.0 1.8E-34 3.9E-39 304.4 20.9 253 525-801 17-270 (286)
302 KOG0986 G protein-coupled rece 100.0 8.8E-36 1.9E-40 300.8 10.2 254 518-794 175-434 (591)
303 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 6.2E-34 1.3E-38 300.3 24.6 257 527-802 1-267 (287)
304 cd06917 STKc_NAK1_like Catalyt 100.0 1.9E-34 4.1E-39 302.8 20.5 248 528-801 2-255 (277)
305 cd06623 PKc_MAPKK_plant_like C 100.0 4.1E-34 8.9E-39 298.0 22.8 251 527-801 1-256 (264)
306 cd06648 STKc_PAK_II Catalytic 100.0 2.1E-34 4.6E-39 303.3 20.7 249 528-801 20-269 (285)
307 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.9E-34 6.3E-39 302.4 21.7 250 527-801 1-261 (283)
308 cd05122 PKc_STE Catalytic doma 100.0 3.2E-34 7E-39 296.5 21.5 250 528-801 1-251 (253)
309 cd07843 STKc_CDC2L1 Catalytic 100.0 2.4E-34 5.1E-39 304.6 20.6 268 527-801 5-290 (293)
310 cd07845 STKc_CDK10 Catalytic d 100.0 3.7E-34 8E-39 305.5 21.9 268 526-801 6-290 (309)
311 cd05574 STKc_phototropin_like 100.0 2.2E-34 4.7E-39 308.4 20.0 253 527-801 1-289 (316)
312 cd07860 STKc_CDK2_3 Catalytic 100.0 2.7E-34 5.9E-39 302.8 20.5 265 528-801 1-281 (284)
313 cd06641 STKc_MST3 Catalytic do 100.0 4E-34 8.8E-39 300.1 21.4 247 528-801 5-253 (277)
314 KOG0690 Serine/threonine prote 100.0 1E-35 2.3E-40 287.6 8.3 241 526-793 167-411 (516)
315 KOG1035 eIF-2alpha kinase GCN2 100.0 3.4E-35 7.3E-40 329.6 13.4 253 526-800 478-870 (1351)
316 cd06606 STKc_MAPKKK Catalytic 100.0 6.2E-34 1.3E-38 295.7 22.0 252 528-801 1-257 (260)
317 cd07831 STKc_MOK Catalytic dom 100.0 6.5E-34 1.4E-38 299.6 22.3 261 529-801 1-279 (282)
318 cd07842 STKc_CDK8_like Catalyt 100.0 5.2E-34 1.1E-38 305.7 21.9 270 528-801 1-313 (316)
319 KOG0604 MAP kinase-activated p 100.0 3.8E-35 8.2E-40 281.3 11.4 256 523-802 57-323 (400)
320 cd08217 STKc_Nek2 Catalytic do 100.0 5.1E-34 1.1E-38 297.4 21.0 252 528-801 1-262 (265)
321 cd07835 STKc_CDK1_like Catalyt 100.0 5.1E-34 1.1E-38 300.5 20.9 266 529-801 1-280 (283)
322 cd05578 STKc_Yank1 Catalytic d 100.0 1E-34 2.3E-39 301.3 15.4 248 528-800 1-254 (258)
323 KOG4250 TANK binding protein k 100.0 1.1E-34 2.3E-39 310.0 14.7 274 528-807 14-312 (732)
324 cd07865 STKc_CDK9 Catalytic do 100.0 8.6E-34 1.9E-38 303.1 21.8 270 526-801 11-307 (310)
325 KOG0662 Cyclin-dependent kinas 100.0 1.5E-34 3.2E-39 256.6 13.0 267 528-801 3-283 (292)
326 KOG0983 Mitogen-activated prot 100.0 4.2E-35 9.1E-40 277.3 10.1 252 527-801 92-349 (391)
327 KOG0584 Serine/threonine prote 100.0 5.3E-35 1.1E-39 308.6 11.9 244 532-801 45-296 (632)
328 PHA03390 pk1 serine/threonine- 100.0 1.3E-33 2.9E-38 294.0 22.4 250 520-801 7-262 (267)
329 cd07836 STKc_Pho85 Catalytic d 100.0 1.4E-33 3E-38 297.5 22.6 267 528-801 1-281 (284)
330 cd07837 STKc_CdkB_plant Cataly 100.0 9.5E-34 2E-38 300.4 21.3 266 527-801 1-291 (295)
331 cd07840 STKc_CDK9_like Catalyt 100.0 8.7E-34 1.9E-38 299.5 21.0 267 529-801 1-284 (287)
332 cd06635 STKc_TAO1 Catalytic do 100.0 1.2E-33 2.5E-38 302.5 21.9 247 529-804 27-280 (317)
333 KOG0607 MAP kinase-interacting 100.0 1.6E-34 3.5E-39 279.0 13.3 269 518-801 74-361 (463)
334 cd05633 STKc_GRK3 Catalytic do 100.0 8.9E-34 1.9E-38 297.4 20.1 242 534-801 1-255 (279)
335 cd08226 PK_STRAD_beta Pseudoki 100.0 1.3E-33 2.9E-38 303.6 21.8 267 533-802 4-309 (328)
336 cd07849 STKc_ERK1_2_like Catal 100.0 6.8E-34 1.5E-38 306.9 19.6 273 526-806 4-299 (336)
337 cd08225 STKc_Nek5 Catalytic do 100.0 4.5E-34 9.8E-39 296.4 17.3 249 528-801 1-254 (257)
338 PHA02882 putative serine/threo 100.0 1.1E-33 2.5E-38 298.9 20.5 258 527-802 12-293 (294)
339 cd07864 STKc_CDK12 Catalytic d 100.0 1.3E-33 2.8E-38 300.5 21.1 271 524-801 4-299 (302)
340 cd05118 STKc_CMGC Catalytic do 100.0 2E-33 4.4E-38 296.0 22.0 266 529-801 1-280 (283)
341 PHA03210 serine/threonine kina 100.0 5.6E-34 1.2E-38 321.4 19.0 272 525-801 146-454 (501)
342 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.5E-33 3.2E-38 293.7 20.7 251 527-801 2-261 (264)
343 cd08216 PK_STRAD Pseudokinase 100.0 1.5E-33 3.2E-38 301.7 21.3 267 531-802 6-296 (314)
344 cd07855 STKc_ERK5 Catalytic do 100.0 6E-34 1.3E-38 307.1 18.2 270 526-802 4-295 (334)
345 cd06627 STKc_Cdc7_like Catalyt 100.0 1.3E-33 2.8E-38 292.4 19.9 248 528-801 1-251 (254)
346 cd05577 STKc_GRK Catalytic dom 100.0 1.6E-33 3.5E-38 295.6 20.4 244 535-801 1-254 (277)
347 cd05572 STKc_cGK_PKG Catalytic 100.0 1.5E-33 3.2E-38 293.4 20.0 242 535-800 1-251 (262)
348 cd06618 PKc_MKK7 Catalytic dom 100.0 1.8E-33 3.8E-38 298.2 20.9 253 526-802 14-274 (296)
349 cd07850 STKc_JNK Catalytic dom 100.0 1.3E-33 2.7E-38 306.9 20.1 265 524-801 13-311 (353)
350 cd07852 STKc_MAPK15 Catalytic 100.0 1.3E-33 2.8E-38 305.1 19.8 269 525-801 5-295 (337)
351 cd06616 PKc_MKK4 Catalytic dom 100.0 8.7E-34 1.9E-38 299.5 18.2 253 528-801 5-267 (288)
352 PLN00009 cyclin-dependent kina 100.0 2.3E-33 4.9E-38 297.3 21.1 267 527-801 2-284 (294)
353 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1E-33 2.2E-38 305.5 18.5 276 525-808 3-300 (337)
354 cd08215 STKc_Nek Catalytic dom 100.0 3E-33 6.5E-38 290.3 21.3 249 528-801 1-255 (258)
355 cd06657 STKc_PAK4 Catalytic do 100.0 2.5E-33 5.4E-38 295.9 20.9 245 532-801 25-270 (292)
356 cd05579 STKc_MAST_like Catalyt 100.0 8.5E-34 1.8E-38 295.7 15.9 245 535-802 1-255 (265)
357 cd08530 STKc_CNK2-like Catalyt 100.0 1.9E-33 4.2E-38 291.5 18.0 247 528-801 1-253 (256)
358 KOG0586 Serine/threonine prote 100.0 8.6E-34 1.9E-38 299.3 15.4 251 526-804 55-309 (596)
359 cd06634 STKc_TAO2 Catalytic do 100.0 2.9E-33 6.3E-38 298.0 19.6 249 527-804 15-270 (308)
360 cd05611 STKc_Rim15_like Cataly 100.0 2.7E-33 5.9E-38 291.0 18.9 241 533-800 2-247 (260)
361 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.4E-33 9.6E-38 298.9 20.8 267 523-801 6-288 (328)
362 cd05606 STKc_beta_ARK Catalyti 100.0 5.1E-33 1.1E-37 291.7 20.7 242 534-801 1-255 (278)
363 cd07879 STKc_p38delta_MAPK13 C 100.0 4.7E-33 1E-37 300.8 20.8 269 526-807 14-305 (342)
364 KOG0669 Cyclin T-dependent kin 100.0 2E-35 4.4E-40 276.1 1.8 272 527-802 17-316 (376)
365 cd07838 STKc_CDK4_6_like Catal 100.0 1E-32 2.2E-37 291.3 22.5 265 529-801 1-284 (287)
366 cd07834 STKc_MAPK Catalytic do 100.0 3.2E-33 6.9E-38 301.3 19.0 273 528-807 1-297 (330)
367 cd06633 STKc_TAO3 Catalytic do 100.0 8.5E-33 1.8E-37 295.1 21.7 244 529-801 23-273 (313)
368 cd05581 STKc_PDK1 Catalytic do 100.0 1.3E-33 2.9E-38 296.9 15.1 250 527-801 1-277 (280)
369 PTZ00024 cyclin-dependent prot 100.0 9.7E-33 2.1E-37 298.0 22.2 270 526-801 7-313 (335)
370 cd07866 STKc_BUR1 Catalytic do 100.0 6.4E-33 1.4E-37 296.5 20.5 271 526-801 7-308 (311)
371 KOG0612 Rho-associated, coiled 100.0 1.8E-34 4E-39 321.0 8.7 258 521-801 69-338 (1317)
372 cd07880 STKc_p38gamma_MAPK12 C 100.0 7E-33 1.5E-37 299.5 20.8 268 522-801 10-298 (343)
373 cd07830 STKc_MAK_like Catalyti 100.0 9.9E-33 2.1E-37 290.8 20.8 263 529-801 1-280 (283)
374 cd05613 STKc_MSK1_N N-terminal 100.0 1.1E-32 2.3E-37 291.5 20.7 252 528-801 1-268 (290)
375 KOG0618 Serine/threonine phosp 100.0 3E-36 6.4E-41 329.2 -6.7 424 3-447 27-488 (1081)
376 cd05583 STKc_MSK_N N-terminal 100.0 5.5E-33 1.2E-37 293.3 18.4 255 528-804 1-266 (288)
377 cd07877 STKc_p38alpha_MAPK14 C 100.0 1E-32 2.3E-37 298.4 20.3 273 517-801 7-300 (345)
378 cd07829 STKc_CDK_like Catalyti 100.0 1.5E-32 3.2E-37 289.3 20.4 264 529-801 1-279 (282)
379 cd07854 STKc_MAPK4_6 Catalytic 100.0 7.5E-33 1.6E-37 299.2 18.3 267 526-801 4-300 (342)
380 cd07851 STKc_p38 Catalytic dom 100.0 4.7E-33 1E-37 301.0 15.8 266 523-801 11-298 (343)
381 cd08222 STKc_Nek11 Catalytic d 100.0 1E-32 2.2E-37 286.7 16.4 248 528-801 1-257 (260)
382 cd07857 STKc_MPK1 Catalytic do 100.0 3E-32 6.5E-37 293.6 20.3 268 528-801 1-292 (332)
383 cd05123 STKc_AGC Catalytic dom 100.0 2.6E-32 5.5E-37 282.0 17.0 236 535-797 1-240 (250)
384 KOG4236 Serine/threonine prote 100.0 2.5E-33 5.4E-38 286.9 8.7 245 532-802 569-820 (888)
385 cd05610 STKc_MASTL Catalytic d 100.0 5.8E-32 1.3E-36 314.4 21.0 146 526-675 3-152 (669)
386 KOG1151 Tousled-like protein k 100.0 2.2E-33 4.8E-38 281.7 7.7 258 526-800 462-740 (775)
387 KOG0671 LAMMER dual specificit 100.0 5.1E-33 1.1E-37 276.5 9.9 264 526-801 88-406 (415)
388 KOG0603 Ribosomal protein S6 k 100.0 1.8E-32 3.9E-37 291.1 14.3 243 526-804 321-566 (612)
389 KOG0696 Serine/threonine prote 100.0 8.2E-33 1.8E-37 275.4 9.5 242 526-794 348-594 (683)
390 cd05576 STKc_RPK118_like Catal 100.0 8.9E-32 1.9E-36 275.1 17.1 220 538-796 4-224 (237)
391 KOG1006 Mitogen-activated prot 100.0 2.2E-33 4.7E-38 264.9 2.0 251 531-801 68-327 (361)
392 PLN03225 Serine/threonine-prot 100.0 5.2E-31 1.1E-35 298.4 21.4 260 525-801 130-450 (566)
393 KOG0587 Traf2- and Nck-interac 100.0 2.4E-31 5.1E-36 289.8 17.0 256 522-801 14-282 (953)
394 KOG1027 Serine/threonine prote 100.0 4.5E-32 9.7E-37 294.0 7.6 245 529-801 511-767 (903)
395 PLN03224 probable serine/threo 100.0 1.7E-30 3.7E-35 285.9 19.2 257 526-801 144-500 (507)
396 smart00220 S_TKc Serine/Threon 100.0 3.4E-30 7.4E-35 264.6 19.4 238 539-800 1-240 (244)
397 KOG0695 Serine/threonine prote 100.0 7E-31 1.5E-35 255.0 12.6 247 526-793 249-502 (593)
398 KOG0668 Casein kinase II, alph 100.0 1.9E-31 4.2E-36 246.2 8.3 264 525-801 36-322 (338)
399 KOG0614 cGMP-dependent protein 100.0 9.8E-32 2.1E-36 274.6 5.2 251 527-803 420-679 (732)
400 KOG0664 Nemo-like MAPK-related 100.0 3.5E-32 7.6E-37 257.1 1.6 267 530-804 56-346 (449)
401 KOG0618 Serine/threonine phosp 100.0 1.6E-32 3.5E-37 300.1 -3.3 428 3-446 4-463 (1081)
402 KOG0608 Warts/lats-like serine 100.0 6.9E-30 1.5E-34 267.1 13.0 205 529-737 631-879 (1034)
403 KOG0984 Mitogen-activated prot 100.0 1.3E-29 2.7E-34 230.8 10.7 212 527-744 46-267 (282)
404 KOG0665 Jun-N-terminal kinase 100.0 1.5E-29 3.2E-34 246.0 8.9 263 524-801 14-310 (369)
405 KOG1290 Serine/threonine prote 100.0 2.3E-28 4.9E-33 249.8 15.9 130 527-660 78-221 (590)
406 KOG1152 Signal transduction se 100.0 4.3E-29 9.3E-34 259.4 10.5 198 526-731 560-771 (772)
407 KOG0670 U4/U6-associated splic 100.0 3E-29 6.5E-34 257.2 8.8 268 524-801 429-746 (752)
408 cd00180 PKc Catalytic domain o 100.0 1.8E-27 4E-32 238.5 21.3 211 535-802 1-215 (215)
409 KOG0576 Mitogen-activated prot 100.0 2.5E-29 5.4E-34 265.6 4.2 253 526-800 14-270 (829)
410 KOG1167 Serine/threonine prote 99.9 7.1E-28 1.5E-32 243.6 10.5 271 522-801 31-381 (418)
411 smart00221 STYKc Protein kinas 99.9 2.4E-26 5.3E-31 233.0 19.9 199 529-731 1-202 (225)
412 KOG1345 Serine/threonine kinas 99.9 2.5E-27 5.5E-32 224.6 10.5 269 526-818 23-302 (378)
413 KOG4237 Extracellular matrix p 99.9 6.2E-29 1.4E-33 247.5 -4.3 391 22-422 68-498 (498)
414 KOG0195 Integrin-linked kinase 99.9 5.9E-27 1.3E-31 221.8 6.6 249 530-806 193-447 (448)
415 smart00750 KIND kinase non-cat 99.9 5.2E-25 1.1E-29 213.9 15.1 170 608-808 1-172 (176)
416 PLN03210 Resistant to P. syrin 99.9 3.6E-24 7.8E-29 263.4 22.5 305 70-399 590-904 (1153)
417 PLN00181 protein SPA1-RELATED; 99.9 1.7E-25 3.6E-30 267.4 9.5 197 579-801 28-265 (793)
418 PLN03210 Resistant to P. syrin 99.9 1E-23 2.2E-28 259.4 23.3 339 60-423 549-904 (1153)
419 PRK15387 E3 ubiquitin-protein 99.9 3E-24 6.5E-29 244.3 14.9 224 94-360 242-465 (788)
420 PRK15387 E3 ubiquitin-protein 99.9 3.8E-24 8.2E-29 243.5 15.4 267 69-386 201-467 (788)
421 KOG1163 Casein kinase (serine/ 99.9 2.4E-23 5.2E-28 194.4 14.8 264 525-807 13-286 (341)
422 KOG1164 Casein kinase (serine/ 99.9 1.6E-22 3.5E-27 215.3 21.4 261 528-808 19-300 (322)
423 KOG4237 Extracellular matrix p 99.9 5.1E-26 1.1E-30 226.9 -5.6 309 74-429 51-363 (498)
424 PRK09188 serine/threonine prot 99.9 6E-23 1.3E-27 216.7 15.7 167 524-704 15-195 (365)
425 KOG1165 Casein kinase (serine/ 99.9 3.8E-22 8.2E-27 195.0 19.3 264 527-809 28-303 (449)
426 KOG0590 Checkpoint kinase and 99.9 1.3E-22 2.9E-27 228.6 8.0 261 531-814 322-592 (601)
427 PRK15370 E3 ubiquitin-protein 99.9 4.3E-22 9.4E-27 228.6 12.0 121 21-157 178-298 (754)
428 PRK15370 E3 ubiquitin-protein 99.9 8.7E-22 1.9E-26 226.1 11.8 246 95-377 179-428 (754)
429 COG0515 SPS1 Serine/threonine 99.9 4.7E-20 1E-24 199.6 22.6 258 529-801 2-275 (384)
430 PRK10359 lipopolysaccharide co 99.8 3.2E-21 7E-26 188.6 8.7 171 525-723 29-216 (232)
431 cd05147 RIO1_euk RIO kinase fa 99.8 1.7E-20 3.6E-25 182.5 12.0 139 532-677 2-167 (190)
432 KOG4158 BRPK/PTEN-induced prot 99.8 2.4E-20 5.1E-25 186.5 10.4 199 581-804 274-513 (598)
433 cd05145 RIO1_like RIO kinase f 99.8 1.7E-19 3.6E-24 176.5 14.5 139 532-678 2-168 (190)
434 PRK12274 serine/threonine prot 99.8 4.6E-19 1E-23 169.2 14.4 187 530-732 5-210 (218)
435 KOG1240 Protein kinase contain 99.8 2.1E-20 4.5E-25 208.9 5.9 249 528-803 24-293 (1431)
436 KOG1023 Natriuretic peptide re 99.8 1.6E-19 3.4E-24 193.7 12.4 216 577-807 1-226 (484)
437 PF14531 Kinase-like: Kinase-l 99.8 4E-19 8.6E-24 179.3 14.1 231 528-792 13-288 (288)
438 KOG0617 Ras suppressor protein 99.8 1.3E-21 2.8E-26 173.3 -3.4 176 268-447 32-211 (264)
439 KOG0617 Ras suppressor protein 99.8 7.2E-21 1.6E-25 168.6 -2.0 181 243-428 31-215 (264)
440 KOG0603 Ribosomal protein S6 k 99.8 3.7E-20 8E-25 197.7 2.3 224 535-795 2-232 (612)
441 cd00116 LRR_RI Leucine-rich re 99.8 2.6E-20 5.7E-25 199.7 -1.3 81 2-82 3-94 (319)
442 cd00116 LRR_RI Leucine-rich re 99.8 8.3E-21 1.8E-25 203.6 -5.8 285 98-424 2-319 (319)
443 KOG1166 Mitotic checkpoint ser 99.8 5.7E-18 1.2E-22 194.2 15.7 196 525-727 696-901 (974)
444 PRK10345 hypothetical protein; 99.8 7.7E-18 1.7E-22 164.9 14.3 137 529-674 4-156 (210)
445 smart00090 RIO RIO-like kinase 99.7 3.7E-17 7.9E-22 164.6 12.8 143 526-677 27-198 (237)
446 PRK14879 serine/threonine prot 99.7 8.6E-17 1.9E-21 161.1 13.3 134 533-676 2-143 (211)
447 KOG1033 eIF-2alpha kinase PEK/ 99.7 4.4E-18 9.5E-23 178.4 3.2 174 596-798 329-509 (516)
448 cd05144 RIO2_C RIO kinase fami 99.7 1E-16 2.2E-21 158.4 12.4 140 525-678 13-176 (198)
449 PRK09605 bifunctional UGMP fam 99.7 2.3E-16 5.1E-21 179.7 16.6 144 519-676 325-476 (535)
450 TIGR03724 arch_bud32 Kae1-asso 99.7 1.3E-16 2.8E-21 158.2 11.0 130 534-676 1-138 (199)
451 KOG0606 Microtubule-associated 99.6 1.7E-16 3.7E-21 178.1 6.3 212 526-796 82-307 (1205)
452 cd05119 RIO RIO kinase family, 99.6 5.4E-15 1.2E-19 144.9 12.0 136 532-678 2-165 (187)
453 KOG0590 Checkpoint kinase and 99.6 1.8E-16 3.9E-21 179.1 -1.1 257 526-800 19-285 (601)
454 cd05120 APH_ChoK_like Aminogly 99.6 1.9E-14 4.2E-19 135.8 12.5 135 531-676 2-138 (155)
455 KOG0532 Leucine-rich repeat (L 99.6 3.5E-16 7.5E-21 164.0 -1.2 195 219-422 73-270 (722)
456 PRK01723 3-deoxy-D-manno-octul 99.6 4.2E-14 9.2E-19 142.8 13.9 136 532-677 36-192 (239)
457 PLN03150 hypothetical protein; 99.5 3.2E-14 7E-19 163.7 9.5 118 341-460 419-538 (623)
458 KOG0532 Leucine-rich repeat (L 99.5 8.4E-16 1.8E-20 161.2 -3.5 195 226-428 55-250 (722)
459 COG4886 Leucine-rich repeat (L 99.4 1.8E-13 3.9E-18 151.0 8.8 261 98-401 97-358 (394)
460 COG4886 Leucine-rich repeat (L 99.4 2E-13 4.4E-18 150.6 9.1 262 121-425 96-358 (394)
461 TIGR01982 UbiB 2-polyprenylphe 99.4 4.1E-13 8.9E-18 147.6 11.0 141 532-678 122-308 (437)
462 KOG0601 Cyclin-dependent kinas 99.4 1.1E-12 2.4E-17 141.2 7.8 249 528-801 115-379 (524)
463 KOG3207 Beta-tubulin folding c 99.3 1.9E-13 4E-18 139.7 -0.0 165 18-186 118-286 (505)
464 KOG1266 Protein kinase [Signal 99.3 2.3E-12 5E-17 126.9 7.5 204 576-803 120-333 (458)
465 KOG1909 Ran GTPase-activating 99.3 1.1E-13 2.3E-18 137.8 -2.8 248 17-305 26-310 (382)
466 PF14580 LRR_9: Leucine-rich r 99.3 9.8E-13 2.1E-17 123.7 3.7 124 1-131 1-126 (175)
467 KOG1259 Nischarin, modulator o 99.3 2.7E-13 5.8E-18 131.5 -0.7 209 213-429 206-416 (490)
468 KOG1243 Protein kinase [Genera 99.3 6.1E-11 1.3E-15 128.8 17.1 167 548-726 34-200 (690)
469 cd05151 ChoK Choline Kinase (C 99.3 1E-11 2.2E-16 119.6 9.8 126 533-675 4-135 (170)
470 PLN03150 hypothetical protein; 99.3 4.7E-12 1E-16 145.9 8.5 114 317-430 419-533 (623)
471 PRK04750 ubiB putative ubiquin 99.3 1E-11 2.2E-16 137.8 9.3 147 526-679 119-316 (537)
472 KOG0531 Protein phosphatase 1, 99.3 8E-13 1.7E-17 145.8 -0.3 64 116-186 70-133 (414)
473 KOG0531 Protein phosphatase 1, 99.2 1.1E-12 2.4E-17 144.7 0.3 245 93-405 71-322 (414)
474 KOG3207 Beta-tubulin folding c 99.2 1.6E-12 3.6E-17 132.9 1.1 207 218-425 118-339 (505)
475 KOG1259 Nischarin, modulator o 99.2 1.3E-12 2.9E-17 126.7 -0.0 81 95-184 285-365 (490)
476 COG4248 Uncharacterized protei 99.2 4.5E-10 9.8E-15 114.8 17.8 268 531-813 15-308 (637)
477 PF14580 LRR_9: Leucine-rich r 99.2 3.3E-12 7.2E-17 120.1 2.2 142 28-179 4-148 (175)
478 COG3642 Mn2+-dependent serine/ 99.2 1.1E-10 2.4E-15 107.3 11.6 131 533-676 2-140 (204)
479 cd05146 RIO3_euk RIO kinase fa 99.2 2.4E-10 5.3E-15 109.8 14.1 136 532-677 2-174 (197)
480 KOG1909 Ran GTPase-activating 99.2 3.8E-13 8.2E-18 133.9 -6.1 89 313-401 210-311 (382)
481 KOG3087 Serine/threonine prote 99.2 3.3E-10 7.1E-15 103.5 11.8 142 531-676 11-165 (229)
482 cd05154 ACAD10_11_like Acyl-Co 99.1 6E-10 1.3E-14 112.5 12.6 141 533-675 4-205 (223)
483 KOG0601 Cyclin-dependent kinas 99.1 4.8E-11 1E-15 128.7 4.6 248 526-806 264-519 (524)
484 KOG4658 Apoptotic ATPase [Sign 99.0 7.1E-11 1.5E-15 138.8 3.2 131 18-153 520-653 (889)
485 KOG4658 Apoptotic ATPase [Sign 99.0 3.3E-10 7.2E-15 133.2 6.3 144 3-150 529-676 (889)
486 KOG0606 Microtubule-associated 99.0 1.5E-10 3.3E-15 131.0 2.0 251 524-796 801-1084(1205)
487 KOG1859 Leucine-rich repeat pr 98.9 2.2E-11 4.8E-16 131.6 -7.0 184 238-427 102-294 (1096)
488 PF01163 RIO1: RIO1 family; I 98.9 1.2E-08 2.7E-13 97.8 11.2 125 542-677 1-156 (188)
489 PF13855 LRR_8: Leucine rich r 98.9 1.9E-09 4.1E-14 83.3 4.3 61 94-154 1-61 (61)
490 PF13855 LRR_8: Leucine rich r 98.9 1.6E-09 3.5E-14 83.7 3.8 61 21-81 1-61 (61)
491 PRK15123 lipopolysaccharide co 98.9 2.7E-08 5.9E-13 101.5 13.9 140 533-676 28-194 (268)
492 KOG1859 Leucine-rich repeat pr 98.8 1.1E-10 2.4E-15 126.3 -5.5 200 242-451 81-295 (1096)
493 COG0478 RIO-like serine/threon 98.8 4E-08 8.6E-13 96.3 10.5 135 529-676 93-251 (304)
494 KOG3741 Poly(A) ribonuclease s 98.8 3.6E-07 7.8E-12 96.7 17.7 167 539-727 288-474 (655)
495 KOG4579 Leucine-rich repeat (L 98.7 6.5E-10 1.4E-14 95.9 -3.3 134 295-431 29-165 (177)
496 KOG2982 Uncharacterized conser 98.7 4.5E-09 9.7E-14 102.6 0.2 61 45-106 71-133 (418)
497 PRK09902 hypothetical protein; 98.7 3.9E-07 8.5E-12 87.7 13.2 154 519-676 10-179 (216)
498 KOG2982 Uncharacterized conser 98.6 6.4E-09 1.4E-13 101.6 0.3 87 220-306 70-159 (418)
499 COG0661 AarF Predicted unusual 98.6 2.1E-07 4.6E-12 102.9 11.2 141 533-679 131-317 (517)
500 KOG2120 SCF ubiquitin ligase, 98.6 9.7E-10 2.1E-14 107.2 -7.1 179 95-279 186-373 (419)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-94 Score=887.45 Aligned_cols=777 Identities=30% Similarity=0.454 Sum_probs=566.7
Q ss_pred CcccccccccCCcccccCCCCCcEEEccCCcccccccccccCCCCCCEEeCCCCcCCcccChhhhCcCCCceeeccCCcc
Q 040845 2 PSIINNFLTSTTPKEIDNISNLKVLYLYNNRLQGEIIHEIGHLHNLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTNNSL 81 (824)
Q Consensus 2 ~~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 81 (824)
|+|++|.+++.+|..++.+++|++|+|++|.+.+.+|..|+++++|++|+|++|.+.+.+|..+.++++|++|+|++|++
T Consensus 145 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 224 (968)
T PLN00113 145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNL 224 (968)
T ss_pred EECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCcc
Confidence 57788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccccCccccCCCCCccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCCcCcc
Q 040845 82 SGCLSSITDVGLPNLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSSTLDL 161 (824)
Q Consensus 82 ~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 161 (824)
++..+... ..+++|++|+|++|++++.+|..+.++++|++|+|++|++.+..|..+.++++|++|++++|.+.....
T Consensus 225 ~~~~p~~l-~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p-- 301 (968)
T PLN00113 225 SGEIPYEI-GGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIP-- 301 (968)
T ss_pred CCcCChhH-hcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCC--
Confidence 75433322 257788888888888877778788888888888888888877777777777888888888777764322
Q ss_pred cccccCCCCCCCcEEECcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEecCCcc--------
Q 040845 162 SFLSSLSNCKSLTHISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNKL-------- 233 (824)
Q Consensus 162 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l-------- 233 (824)
..+.++++|++|++++|.+.+..+..+.. .++|+.|++++|.+.+.+|..++.+++|+.|++++|++
T Consensus 302 ---~~~~~l~~L~~L~l~~n~~~~~~~~~~~~--l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~ 376 (968)
T PLN00113 302 ---ELVIQLQNLEILHLFSNNFTGKIPVALTS--LPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGL 376 (968)
T ss_pred ---hhHcCCCCCcEEECCCCccCCcCChhHhc--CCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhH
Confidence 23455566666666666655554443322 23455555555555555555555555555555555544
Q ss_pred ----------------CCccchhhcCCCCCCEEEcccccCcccCCccccccCCccEEEccCccccccCCccccCCCCCcE
Q 040845 234 ----------------NGSIPITLGKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKV 297 (824)
Q Consensus 234 ----------------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 297 (824)
.+..|..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+.+..+..+..+++|+.
T Consensus 377 ~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 456 (968)
T PLN00113 377 CSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQM 456 (968)
T ss_pred hCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcE
Confidence 4445555555555556666666655555555566666666666666666555555556666666
Q ss_pred EEcCCCCCCCCCCcccccccccccccccccccCcCCccccccccchhhhcccccccccCCCccCCCCCCCeEEccCcccc
Q 040845 298 LSLGSNELTSIPLNFWSLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLE 377 (824)
Q Consensus 298 L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 377 (824)
|++++|++..........++|+.|++++|++.+..|..+.++++|+.|+|++|++.+.+|..+..+++|+.|+|++|.++
T Consensus 457 L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 536 (968)
T PLN00113 457 LSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLS 536 (968)
T ss_pred EECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCccc
Confidence 66666666533333345577888899999998888999999999999999999999999999999999999999999999
Q ss_pred ccCCccccccccccEEEccCcccCCCCcccccCCcccceeeccCCcccCCCCCCCCccccccccccCCccccCCCC-CCC
Q 040845 378 GSIPDSFGDLISLKSLNLSYNNLSGTIPVSLEKLSYLKDLNLSFNKLKGEIPRGGSFGNFSAESFKGNELLCGSPN-LQV 456 (824)
Q Consensus 378 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~-~~~ 456 (824)
+.+|..|..+++|+.|+|++|++++.+|..+..+++|+.|++++|+++|.+|..+.+..+...++.||+.+|+.+. ...
T Consensus 537 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~ 616 (968)
T PLN00113 537 GQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGL 616 (968)
T ss_pred ccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998653 334
Q ss_pred CCCCCcccccccccceEeeehhhHHHHHHHHHHHHHHHHhcccC-CCCCCCC---CCCc-----cccccccHHHHHHhhc
Q 040845 457 PPCKASIHRTSRKNALILGIVLPFSTIFMTAIILFIIKYQKREK-GPPNDPN---MPPV-----ATWRRFSYLELFQATD 527 (824)
Q Consensus 457 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rkr~~-~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~ 527 (824)
++|..... ...+++++++++++. ++++++++.+++++++++ ..+.... .... .....+++ .....
T Consensus 617 ~~c~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 690 (968)
T PLN00113 617 PPCKRVRK--TPSWWFYITCTLGAF-LVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITI---NDILS 690 (968)
T ss_pred CCCccccc--cceeeeehhHHHHHH-HHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhH---HHHHh
Confidence 56754311 111222222222222 222222222222222211 1111000 0000 00011222 33345
Q ss_pred cCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccC
Q 040845 528 KFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMP 606 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 606 (824)
.|...+.||+|+||.||+|+. .++..||||.+..... ....|++.+++++|||||+++++|.+++..++||||++
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~ 766 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIE 766 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCC
Confidence 678889999999999999986 4689999998863321 22456889999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 040845 607 HGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQ 686 (824)
Q Consensus 607 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 686 (824)
+|+|.++++ .++|.++.+++.|+|+|++|||+.++.+|+|||+||+||+++.++..++. ||.+..... .
T Consensus 767 ~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~------~ 835 (968)
T PLN00113 767 GKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT------D 835 (968)
T ss_pred CCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc------C
Confidence 999999996 37899999999999999999997667899999999999999999888876 665543211 1
Q ss_pred ccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCc-chhhccccccCchhh
Q 040845 687 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIS-TMEVVDANLLSQEDI 765 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 765 (824)
....+++.|+|||++.+..++.++|||||||++|||+||+.||+...........|++...... .....|+......
T Consensus 836 ~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 913 (968)
T PLN00113 836 TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV-- 913 (968)
T ss_pred CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC--
Confidence 2235789999999999999999999999999999999999999766555666777776544332 2233444332211
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhcc
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSLLR 811 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 811 (824)
..+..+..++.+++.+||+.||++||||+|++++|+++.++...
T Consensus 914 --~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~~ 957 (968)
T PLN00113 914 --SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSSS 957 (968)
T ss_pred --CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccccc
Confidence 11224456789999999999999999999999999998765443
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.7e-51 Score=502.59 Aligned_cols=440 Identities=37% Similarity=0.583 Sum_probs=371.8
Q ss_pred CcccccccccCCcccccCCCCCcEEEccCCcccccccccccCCCCCCEEeCCCCcCCcccChhhhCcCCCceeeccCCcc
Q 040845 2 PSIINNFLTSTTPKEIDNISNLKVLYLYNNRLQGEIIHEIGHLHNLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTNNSL 81 (824)
Q Consensus 2 ~~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 81 (824)
|+|++|++++.+|. +.+++|++|+|++|.+.+.+|..|+++++|++|+|++|.+.+.+|..+.++++|++|+|++|++
T Consensus 123 L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 200 (968)
T PLN00113 123 LNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQL 200 (968)
T ss_pred EECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCC
Confidence 67899999998886 6789999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCccccCCCCCccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCCcCcc
Q 040845 82 SGCLSSITDVGLPNLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSSTLDL 161 (824)
Q Consensus 82 ~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 161 (824)
.+..+... ..+++|++|+|++|++++.+|..+..+++|++|+|++|.+++..|..|+++++|++|++++|.++...
T Consensus 201 ~~~~p~~l-~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~--- 276 (968)
T PLN00113 201 VGQIPREL-GQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPI--- 276 (968)
T ss_pred cCcCChHH-cCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccC---
Confidence 86544322 35899999999999999999999999999999999999999999999999999999999999987542
Q ss_pred cccccCCCCCCCcEEECcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEecCCccCCccchhh
Q 040845 162 SFLSSLSNCKSLTHISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNKLNGSIPITL 241 (824)
Q Consensus 162 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~ 241 (824)
+..+.++++|++|++++|.+.+..|..+.. ..+|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|..+
T Consensus 277 --p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~--l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l 352 (968)
T PLN00113 277 --PPSIFSLQKLISLDLSDNSLSGEIPELVIQ--LQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNL 352 (968)
T ss_pred --chhHhhccCcCEEECcCCeeccCCChhHcC--CCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHH
Confidence 245788999999999999999887776643 4689999999999999999999999999999999999999999999
Q ss_pred cCCCCCCEEEcccccCcccCCccccccCCccEEEccCccccccCCccccCCCCCcEEEcCCCCCC-CCCCc---------
Q 040845 242 GKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKVLSLGSNELT-SIPLN--------- 311 (824)
Q Consensus 242 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~--------- 311 (824)
..+++|+.|++++|++++..|..++.+.+|+.|++++|++.+..|..++.+++|+.|++++|.++ .+|..
T Consensus 353 ~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 432 (968)
T PLN00113 353 GKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYF 432 (968)
T ss_pred hCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCE
Confidence 99999999999999998877777776666666666666665555555555555555555555554 23333
Q ss_pred ---------------ccccccccccccccccccCcCCccccccccchhhhcccccccccCCCccCCCCCCCeEEccCccc
Q 040845 312 ---------------FWSLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRL 376 (824)
Q Consensus 312 ---------------~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 376 (824)
++.+++|+.|++++|.+.+.+|..+ ..++|+.|++++|++++..|..|..+++|+.|+|++|.+
T Consensus 433 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 511 (968)
T PLN00113 433 LDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKL 511 (968)
T ss_pred EECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcc
Confidence 4445555556666666555555444 346778888888888888888899999999999999999
Q ss_pred cccCCccccccccccEEEccCcccCCCCcccccCCcccceeeccCCcccCCCCCC-CCccccccccccCCccccCCC
Q 040845 377 EGSIPDSFGDLISLKSLNLSYNNLSGTIPVSLEKLSYLKDLNLSFNKLKGEIPRG-GSFGNFSAESFKGNELLCGSP 452 (824)
Q Consensus 377 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~~ 452 (824)
++.+|..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++.+|.. ..+..+..+.+.+|+..+..|
T Consensus 512 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 512 SGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred eeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 9999999999999999999999999999999999999999999999999988863 446677888889998776554
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-49 Score=420.88 Aligned_cols=290 Identities=42% Similarity=0.679 Sum_probs=246.6
Q ss_pred ccccccHHHHHHhhccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeee
Q 040845 513 TWRRFSYLELFQATDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSC 592 (824)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 592 (824)
....|++.++..+|++|...++||+|+||.||+|..++|+.||||++.........+|..|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 56789999999999999999999999999999999998999999988655433145599999999999999999999999
Q ss_pred ecCC-eeEEEEeccCCCCHHHHhhhCCC-CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEee
Q 040845 593 SNEE-FKALVLEYMPHGSLEKYLHSSNY-SLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 670 (824)
Q Consensus 593 ~~~~-~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 670 (824)
.+.+ +.++|||||++|+|.++++.... .++|.+|.+||.++|+||+|||+.+..+|+||||||+|||+|+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9988 59999999999999999998776 899999999999999999999988888999999999999999999999999
Q ss_pred cccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccc-cCcchhhhhhhhhCCC
Q 040845 671 FGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELF-NGEMTLKHWVNDCLPI 749 (824)
Q Consensus 671 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~ 749 (824)
||+|+.......... +...||.+|+|||+...+..+.|+|||||||+++|++||+.|.+... .++..+..|+......
T Consensus 221 FGLa~~~~~~~~~~~-~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 221 FGLAKLGPEGDTSVS-TTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred ccCcccCCcccccee-eecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 999965432111111 11179999999999999999999999999999999999999888644 4455688998766655
Q ss_pred -cchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 040845 750 -STMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRD 807 (824)
Q Consensus 750 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 807 (824)
...+++|+.+...... ...+...+..++.+|++.+|.+||+|.||++.|+.+..
T Consensus 300 ~~~~eiiD~~l~~~~~~----~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 300 GKLREIVDPRLKEGEYP----DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred cchhheeCCCccCCCCC----hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 4778889887631111 01345668999999999999999999999999966543
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-48 Score=404.27 Aligned_cols=256 Identities=32% Similarity=0.506 Sum_probs=222.6
Q ss_pred cCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 528 KFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
.+...+.||+|.||+||.|.|+...+||+|.++.. ....++|.+|+++|++|+|++||+++|+|..++..+||||||+.
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence 34556889999999999999997779999999754 44567889999999999999999999999999999999999999
Q ss_pred CCHHHHhhh-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 040845 608 GSLEKYLHS-SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQ 686 (824)
Q Consensus 608 g~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 686 (824)
|+|.++++. .+..+...+.+.++.|||+|++||+ ++++|||||.++|||++++..+||+|||+|+.. .++.....
T Consensus 286 GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~-~d~~Y~~~ 361 (468)
T KOG0197|consen 286 GSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLI-GDDEYTAS 361 (468)
T ss_pred CcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEccccccccc-CCCceeec
Confidence 999999987 4567889999999999999999999 999999999999999999999999999999943 34444455
Q ss_pred ccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 687 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
....-+..|+|||.+..+.++.|||||||||+|||++| |+.||...... +.+ ..-..+.
T Consensus 362 ~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-----ev~---------------~~le~Gy 421 (468)
T KOG0197|consen 362 EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-----EVL---------------ELLERGY 421 (468)
T ss_pred CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-----HHH---------------HHHhccC
Confidence 55667899999999999999999999999999999999 77776653221 111 1234567
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDS 808 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 808 (824)
+++.|+.||..++++|..||+.+|++|||++.+...++++..+
T Consensus 422 Rlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 422 RLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred cCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 8888999999999999999999999999999999998887653
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-46 Score=396.40 Aligned_cols=258 Identities=32% Similarity=0.509 Sum_probs=214.8
Q ss_pred CCCCceeeeccceEEEEEEECCCcE-EEEEEeeccccc--hhhhHHHHHHHHhcCCCCcceeEEeeeecCC-eeEEEEec
Q 040845 529 FSENNLIGRGGFGSVYKARIRDGME-VAVKVFNLQCGR--AFKSFDVECAMMKSIRHRNLVKVISSCSNEE-FKALVLEY 604 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~~~~~-vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 604 (824)
....+.+|+|+||+||+|.|+ |+. ||||.+...... ..++|.+|+.+|.+++|||||+++|+|.++. ..++||||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred hhhhhhcccCCceeEEEEEeC-CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 344556999999999999998 555 999999765322 2568999999999999999999999999887 78999999
Q ss_pred cCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-eEecCCCCCCeeeCCCC-cEEEeecccccccCCCC
Q 040845 605 MPHGSLEKYLHSS-NYSLDIFQRLNIMIDVASALEYLHFGYSAP-VIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLTGED 681 (824)
Q Consensus 605 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~Dlk~~Nill~~~~-~~kl~Dfg~a~~~~~~~ 681 (824)
+++|+|.++++.. ...+++..++.++.|||+|+.||| +.+ ||||||||+|||++.++ ++||+|||+++......
T Consensus 122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 9999999999883 568999999999999999999999 888 99999999999999997 99999999998754322
Q ss_pred CccccccccccccccCccCcC--CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 682 QSMTQTQTLATIGYMAPEYGR--EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||...... ......+.
T Consensus 199 --~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-~~~~~v~~--------------- 260 (362)
T KOG0192|consen 199 --TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-QVASAVVV--------------- 260 (362)
T ss_pred --ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHh---------------
Confidence 3334467999999999999 568999999999999999999999999875441 11111111
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhcc
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSLLR 811 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 811 (824)
...+...+..|+..+..+|.+||..||++||++.|++..|+.+......
T Consensus 261 ---~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 261 ---GGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred ---cCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 1112222334788899999999999999999999999999999775543
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-46 Score=371.39 Aligned_cols=252 Identities=24% Similarity=0.334 Sum_probs=209.9
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCC-eeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEE-FKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 604 (824)
+.+..+.||+|..|+||+++++ +++-+|+|++....+ ...+++.+|++++++.+||+||.++|+|..+. ...++|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 4455689999999999999876 588999999965533 44678899999999999999999999999988 59999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
|++|+|++++...+ .+++....+++.+|++||.|||+ +++||||||||+|||+...|++||||||.+..+.+.
T Consensus 160 MDgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---- 232 (364)
T KOG0581|consen 160 MDGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---- 232 (364)
T ss_pred cCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh----
Confidence 99999999998765 78999999999999999999994 499999999999999999999999999999877543
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchh
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
.....+||..|||||.+.+..|+.++||||||+.++|+.+|+.||....++... ..+.++..+...+
T Consensus 233 ~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~------------~~~Ll~~Iv~~pp- 299 (364)
T KOG0581|consen 233 IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLD------------IFELLCAIVDEPP- 299 (364)
T ss_pred hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCC------------HHHHHHHHhcCCC-
Confidence 334567999999999999999999999999999999999999998764111111 1112222111111
Q ss_pred hhhhhHH-HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 765 IHFVAKE-QCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 765 ~~~~~~~-~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.+ .|. .|++++..++..|+++||.+||+++|+++|
T Consensus 300 P~--lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 300 PR--LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CC--CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11 122 478899999999999999999999999886
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.3e-45 Score=384.20 Aligned_cols=248 Identities=25% Similarity=0.368 Sum_probs=212.8
Q ss_pred ccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeecc---ccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQ---CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
.+|...++||+|||+.+|.++. .+|..||+|++.+. .....+.+.+|+++.+.|+|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5699999999999999999987 77999999999763 3456778899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
|+|+.++|.+++++ ++.+++.+++.+++||+.|+.||| +.+|+|||||..|++++++.++||+|||+|+.+..++.
T Consensus 98 ELC~~~sL~el~Kr-rk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR-RKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred EecCCccHHHHHHh-cCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCccc
Confidence 99999999999984 458999999999999999999999 99999999999999999999999999999998864432
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
.....+||+.|.|||++....++..+||||+||++|-|++|++||+...-.+ .+..+...
T Consensus 174 --rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke-ty~~Ik~~----------------- 233 (592)
T KOG0575|consen 174 --RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE-TYNKIKLN----------------- 233 (592)
T ss_pred --ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH-HHHHHHhc-----------------
Confidence 2234579999999999999999999999999999999999999998731111 11111111
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
+...|...+.++.+||.++++.||.+|||+.+|+.+
T Consensus 234 ---~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 234 ---EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred ---CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 111223456678999999999999999999999876
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4e-45 Score=366.13 Aligned_cols=201 Identities=31% Similarity=0.516 Sum_probs=181.7
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecc--ccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQ--CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
..+|...+.||+|+||+||+|+++ ++..||||.+... ..+..+....|+++|+.++|||||++++++..++..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 467888899999999999999875 4899999998765 4456677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC------CcEEEeecccccc
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN------MVAHLSDFGIAKL 676 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~------~~~kl~Dfg~a~~ 676 (824)
|||+||+|.+|+++.+ .+++..+..++.|+|.|+++|| +++||||||||.|||++.. -.+||+|||+|+.
T Consensus 89 EyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred EeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 9999999999999887 7999999999999999999999 9999999999999999764 4689999999998
Q ss_pred cCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccc
Q 040845 677 LTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELF 733 (824)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~ 733 (824)
+... ......+|++-|||||+++..+|+.|+|+||+|+++||+++|++||+...
T Consensus 165 L~~~---~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 165 LQPG---SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred CCch---hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 8632 23345679999999999999999999999999999999999999998643
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-45 Score=366.38 Aligned_cols=253 Identities=24% Similarity=0.347 Sum_probs=208.1
Q ss_pred hccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccccc-------hhhhHHHHHHHHhcCCCCcceeEEeeeecCCe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQCGR-------AFKSFDVECAMMKSIRHRNLVKVISSCSNEEF 597 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 597 (824)
.+.|.+.+.||+|+||.|-+|.. ++|+.||||+++..... ....+.+|+++|++|+|||||+++++|..++.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 46688899999999999999964 56999999999754211 12335789999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC---CcEEEeecccc
Q 040845 598 KALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN---MVAHLSDFGIA 674 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~Dfg~a 674 (824)
.|+||||++||+|.+++-..+ .+.+....-+++|++.|+.||| ++||+||||||+|||+..+ ..+||+|||+|
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred eEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccchh
Confidence 999999999999999998766 5777788899999999999999 9999999999999999755 78999999999
Q ss_pred cccCCCCCccccccccccccccCccCcCCCC---CCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcc
Q 040845 675 KLLTGEDQSMTQTQTLATIGYMAPEYGREGQ---VSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIST 751 (824)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 751 (824)
+... ........+||+.|.|||++.++. +..++|+||+||++|-+++|.+||.+......-..++.+..+.
T Consensus 327 K~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~--- 400 (475)
T KOG0615|consen 327 KVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYA--- 400 (475)
T ss_pred hccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCccc---
Confidence 9764 223344567999999999998664 3447899999999999999999998855443233333222221
Q ss_pred hhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 752 MEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....+...+++..++|.+|+..||++|||+.|+++|
T Consensus 401 -------------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 401 -------------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred -------------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 2223345667889999999999999999999999876
No 10
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-44 Score=395.75 Aligned_cols=259 Identities=32% Similarity=0.530 Sum_probs=224.5
Q ss_pred ccCCCCceeeeccceEEEEEEEC------CCcEEEEEEeeccccc-hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR------DGMEVAVKVFNLQCGR-AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKA 599 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 599 (824)
.+....+.||+|+||+||+|+.. +...||||.++..... ...+|++|++++..++|||||+++|+|.+++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 34455678999999999999754 3467999999877665 7889999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhhCC---------CC----CCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcE
Q 040845 600 LVLEYMPHGSLEKYLHSSN---------YS----LDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVA 666 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~---------~~----~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 666 (824)
+|+|||..|||.+|+.... .. ++..+.+.||.|||.|++||- ++.+|||||.++|+|+.++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEE
Confidence 9999999999999997432 22 788999999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhh
Q 040845 667 HLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVND 745 (824)
Q Consensus 667 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 745 (824)
||+|||+++.....+++.......-+.+|||||.+..++||.+||||||||++||+++ |+.||++....+. +..
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV-Ie~---- 717 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV-IEC---- 717 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH-HHH----
Confidence 9999999999888887776666778999999999999999999999999999999999 8899887543321 111
Q ss_pred hCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 040845 746 CLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDS 808 (824)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 808 (824)
.... .-+..|++||.++++||..||+..|.+||+++||-..|++.-+.
T Consensus 718 --------------i~~g-~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 718 --------------IRAG-QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred --------------HHcC-CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 0111 12566789999999999999999999999999999999987553
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.4e-44 Score=346.72 Aligned_cols=266 Identities=24% Similarity=0.331 Sum_probs=207.7
Q ss_pred ccCCCCceeeeccceEEEEEEECC-CcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
++|+...++|+|+||+||+++.++ |+.||||.+.... ....+-..+|+.+|++++|+|+|.++.+|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 578889999999999999999775 9999999985332 2334567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|++. ++.+-+.+.....+...+.++++|++.|+.|+| +++++||||||+|||++.+|.+|+||||+|+.+..+.
T Consensus 82 ~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg-- 155 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG-- 155 (396)
T ss_pred ecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCCc--
Confidence 9987 666666777778999999999999999999999 9999999999999999999999999999999886433
Q ss_pred cccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhh---hCCCcchhhcc---
Q 040845 684 MTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVND---CLPISTMEVVD--- 756 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--- 756 (824)
...+.++.|.||+|||.+.+ ..|+..+||||+||++.||++|.+-|.+..+-+. +..+... ..|. -..++.
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQ-Ly~I~ktLG~L~pr-hq~iF~~N~ 233 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQ-LYLIRKTLGNLIPR-HQSIFSSNP 233 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHH-HHHHHHHHcccCHH-HHHHhccCC
Confidence 34566789999999998887 6799999999999999999999998765322111 1111111 1110 001110
Q ss_pred -------ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 757 -------ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 757 -------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
+.....+..+. .-+..+..+.++++.|++.||++|++-+|++.|
T Consensus 234 ~F~Gv~lP~~~~~epLe~-k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 234 FFHGVRLPEPEHPEPLER-KYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred ceeeeecCCCCCccchhh-hcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 00000111111 112445578999999999999999999998864
No 12
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-45 Score=350.10 Aligned_cols=256 Identities=25% Similarity=0.369 Sum_probs=204.7
Q ss_pred ccCCCCceeeeccceEEEEEE-ECCCcEEEEEEeecc--ccchhhhHHHHHHHHhcCCCCcceeEEe-eeecCC-eeEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQ--CGRAFKSFDVECAMMKSIRHRNLVKVIS-SCSNEE-FKALV 601 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~-~~~lv 601 (824)
.+|++.+.||+|+||+||++. ..+|..||.|.+.-. .....++...|+.+|++|+|||||++++ .+.++. ..++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 457888999999999999996 567999999987633 2445677888999999999999999999 454444 48999
Q ss_pred EeccCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEecCCCCCCeeeCCCCcEEEeecccccc
Q 040845 602 LEYMPHGSLEKYLHSS---NYSLDIFQRLNIMIDVASALEYLHFGYSAP--VIHCDLKPSNVLLDDNMVAHLSDFGIAKL 676 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 676 (824)
|||+++|+|...++.. +..+++..+|+++.|+++||.++|..+ .+ |+||||||.||+++.+|.+|++|||+++.
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 9999999999998753 367899999999999999999999432 44 88999999999999999999999999998
Q ss_pred cCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcc
Q 040845 677 LTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVD 756 (824)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (824)
+... .......+|||.||+||.+.+..|+.++||||+||++|||+.-++||++. .-..+..-+. .
T Consensus 178 l~s~--~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~~L~~KI~---q-------- 242 (375)
T KOG0591|consen 178 LSSK--TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLLSLCKKIE---Q-------- 242 (375)
T ss_pred hcch--hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHHHHHHHHH---c--------
Confidence 7532 33445678999999999999999999999999999999999999999873 1111111000 0
Q ss_pred ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 757 ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
........+.++..+..|+..|+.+||+.||+.-.++..+..
T Consensus 243 ------gd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 243 ------GDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred ------CCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 011111224678889999999999999999985444444433
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-43 Score=352.31 Aligned_cols=242 Identities=29% Similarity=0.368 Sum_probs=202.9
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
.++|++.++||+|+||+||.++.+ +++.+|+|++++.. ....+....|..+|.+++||+||.++..|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 568999999999999999999755 48999999997652 34567788899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
+||+.||.|..++++.+ .+++..+.-++.+|+.||.||| +++|||||+||+|||+|.+|+++|+|||+|+.....
T Consensus 104 ld~~~GGeLf~hL~~eg-~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~- 178 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG-RFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD- 178 (357)
T ss_pred EeccCCccHHHHHHhcC-CcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhcccC-
Confidence 99999999999998777 7889999999999999999999 999999999999999999999999999999854322
Q ss_pred CccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 682 QSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
.......+||+.|||||++.+..|+.++|.||+|+++|||++|.+||.... ...++....... .
T Consensus 179 -~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~-----~~~~~~~I~~~k--------~-- 242 (357)
T KOG0598|consen 179 -GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED-----VKKMYDKILKGK--------L-- 242 (357)
T ss_pred -CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc-----HHHHHHHHhcCc--------C--
Confidence 122233689999999999999999999999999999999999999998732 222222222111 0
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCC
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRI 793 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 793 (824)
...+.-.+.+..+++.++++.||++|.
T Consensus 243 -----~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 243 -----PLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -----CCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 001112356688999999999999996
No 14
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-43 Score=362.53 Aligned_cols=269 Identities=26% Similarity=0.339 Sum_probs=212.3
Q ss_pred hccCCCCceeeeccceEEEEEE-ECCCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecC--CeeEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNE--EFKAL 600 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 600 (824)
.+.|+..++||+|+||.||+|+ ..+|+.||+|.++.+. .+......+||.+|++|.||||+++.+...+. ...|+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3457777899999999999997 4579999999987664 44456677899999999999999999998776 68999
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
|+|||++ +|..++...+-.+++.++..++.|+++||+||| +++|+|||||.+|||+|.+|.+||+|||+|+++...
T Consensus 196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 9999987 999999988888999999999999999999999 999999999999999999999999999999987644
Q ss_pred CCccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcch-------
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTM------- 752 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------- 752 (824)
. ....+..+.|.||+|||.+.+. .|+.++|+||.|||+.||++|++.|.+..+-+ .+..+.+-+......
T Consensus 272 ~-~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve-Ql~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 272 G-SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE-QLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred C-CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH-HHHHHHHHhCCCChhccccccC
Confidence 3 3346778899999999988765 69999999999999999999999887643221 122222221111100
Q ss_pred ---hhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 ---EVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
..+.+...-....+. .-...+....+|+..+|..||++|.||.++++.
T Consensus 350 P~~~~~kp~~~y~r~l~E-~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRE-TFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred CcccccCCCCcccchHHH-HhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 000000000000111 123567788999999999999999999998763
No 15
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-44 Score=383.62 Aligned_cols=271 Identities=24% Similarity=0.457 Sum_probs=233.4
Q ss_pred CCCCceeeeccceEEEEEEECC----CcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 529 FSENNLIGRGGFGSVYKARIRD----GMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
..+.++||.|.||+||+|+.+- ...||||.++.... +...+|..|+.||.++.||||+++-|+.......+||+|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 3567899999999999998763 35799999986643 456789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC-C
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED-Q 682 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~ 682 (824)
||++|+|+.|++.....+++.+.+.++++||.|+.||- ++++|||||.++|||++.+..+|++|||+++.+.++. .
T Consensus 711 yMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~ 787 (996)
T KOG0196|consen 711 YMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 787 (996)
T ss_pred hhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccCCCc
Confidence 99999999999998888999999999999999999999 9999999999999999999999999999999875443 3
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
.++..+...+.+|.|||.+...+++.++||||||+++||.++ |.+||.++...+. +. ..
T Consensus 788 ~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV-----------------Ik---aI 847 (996)
T KOG0196|consen 788 AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-----------------IK---AI 847 (996)
T ss_pred cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH-----------------HH---HH
Confidence 344445567889999999999999999999999999999988 9999887543221 11 22
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH--hhccccCCceeeccC
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRD--SLLRNVGGRCIRQSN 822 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~--~~~~~~~~~~~~~~~ 822 (824)
+++++++.|.+||..+++||..||++|-.+||++.|++.+|.++.. ...+.+++-..|+++
T Consensus 848 e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~ 910 (996)
T KOG0196|consen 848 EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQ 910 (996)
T ss_pred HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCcc
Confidence 4567888899999999999999999999999999999999999864 445556665555543
No 16
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=7.9e-43 Score=329.30 Aligned_cols=264 Identities=23% Similarity=0.360 Sum_probs=209.3
Q ss_pred ccCCCCceeeeccceEEEEEE-ECCCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 527 DKFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
.+|...+++|+|.||.||+|+ .++|+.||||.++... +.......+|++.|+.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 468888999999999999997 4569999999997653 2234567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
||+. +|+..++.....++..++..++.++++|++||| .+.|+|||+||.|+|++++|.+||+|||+|+.+......
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 9965 999999988889999999999999999999999 999999999999999999999999999999988655443
Q ss_pred cccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhh---hhhhCCCcch-------
Q 040845 684 MTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHW---VNDCLPISTM------- 752 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~---~~~~~~~~~~------- 752 (824)
. +..+.|.||+|||.+.+. .|+..+||||.||++.||+-|.+-|.+ +.++.+. .+........
T Consensus 158 ~--~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG----~sDidQL~~If~~LGTP~~~~WP~~~~ 231 (318)
T KOG0659|consen 158 Q--THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPG----DSDIDQLSKIFRALGTPTPDQWPEMTS 231 (318)
T ss_pred c--ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCC----CchHHHHHHHHHHcCCCCcccCccccc
Confidence 3 334789999999988765 589999999999999999988875543 3333222 1111100000
Q ss_pred --hhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 --EVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 --~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
+...-........+. .-..++..+.+++.+|+..||.+|+|++|++++
T Consensus 232 lpdY~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 232 LPDYVKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cccHHHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111111111111111 112467778999999999999999999999886
No 17
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-43 Score=368.23 Aligned_cols=268 Identities=27% Similarity=0.421 Sum_probs=219.7
Q ss_pred HHHHHhhccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCe
Q 040845 520 LELFQATDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEF 597 (824)
Q Consensus 520 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 597 (824)
.+++...+++.+...||+|.||+||+|+|- ..||||++.... .+..+.|+.|+..+++-||.||+-+.|+|..+..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 455555677788899999999999999986 579999997664 3457889999999999999999999999999888
Q ss_pred eEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 040845 598 KALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 677 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 677 (824)
.||+.+|+|.+|+.+++-.+.+++..+.+.||.|||+|+.||| .++|||||+|..||++.+++.|||+|||++...
T Consensus 463 -AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred -eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 8999999999999999988888999999999999999999999 999999999999999999999999999999865
Q ss_pred CCCCCccccccccccccccCccCcCCC---CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhh
Q 040845 678 TGEDQSMTQTQTLATIGYMAPEYGREG---QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEV 754 (824)
Q Consensus 678 ~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (824)
.............|..-|||||+++.. .|++++||||||+|+|||+||..||...... . ...+
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d--q------------Iifm 604 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD--Q------------IIFM 604 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh--h------------eEEE
Confidence 433222333344577889999998754 5899999999999999999999998742111 1 1111
Q ss_pred ccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 040845 755 VDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSL 809 (824)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 809 (824)
+-...... .......+|+.++.+|+..||+.++++||.+.+++..|+.+..+.
T Consensus 605 VGrG~l~p--d~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~ 657 (678)
T KOG0193|consen 605 VGRGYLMP--DLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL 657 (678)
T ss_pred ecccccCc--cchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence 11110100 011123478899999999999999999999999999999887654
No 18
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-44 Score=361.88 Aligned_cols=265 Identities=23% Similarity=0.314 Sum_probs=209.0
Q ss_pred hhccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccccchhh-hHHHHHHHHhcCC-CCcceeEEeeeecCC-eeEE
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQCGRAFK-SFDVECAMMKSIR-HRNLVKVISSCSNEE-FKAL 600 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~-~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~l 600 (824)
..++|.+.+.||.|+||.||+|+- .+|..||||.++..-..+.+ .-.+|+..|+++. ||||+++.+++.+.+ ..++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 457889999999999999999974 46999999998755333222 2357999999998 999999999998877 9999
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
|||||+ .+|.++++..+..+++..+..|+.||++||+|+| ++|+.|||+||+|||+.....+||+|||+|+.+...
T Consensus 88 VfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk 163 (538)
T KOG0661|consen 88 VFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK 163 (538)
T ss_pred eHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccccC
Confidence 999995 4999999988889999999999999999999999 999999999999999999999999999999976533
Q ss_pred CCccccccccccccccCccCc-CCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhh--hhCCCcchhhccc
Q 040845 681 DQSMTQTQTLATIGYMAPEYG-REGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVN--DCLPISTMEVVDA 757 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 757 (824)
...+.++.|.||+|||++ +.+.|+.+.||||+|||++|+.+-++-|.+.-+ +.+..+ ........+....
T Consensus 164 ---pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE----~Dqi~KIc~VLGtP~~~~~~e 236 (538)
T KOG0661|consen 164 ---PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE----IDQIYKICEVLGTPDKDSWPE 236 (538)
T ss_pred ---CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH----HHHHHHHHHHhCCCccccchh
Confidence 345678899999999965 577899999999999999999999987765322 222111 1111110000000
Q ss_pred --cc----------cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 758 --NL----------LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 758 --~~----------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.+ ..........+ +++.++.++|.+|+++||.+||||+|++++
T Consensus 237 g~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 237 GYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 00 00011111122 488899999999999999999999999886
No 19
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-43 Score=361.62 Aligned_cols=254 Identities=26% Similarity=0.425 Sum_probs=212.6
Q ss_pred HHhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCe
Q 040845 523 FQATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEF 597 (824)
Q Consensus 523 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 597 (824)
.....+|.+++.||+|+|++|++|+.+ +++.||||++.+.. ....+.+..|-.+|..| .||.|++++..|+++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 344578999999999999999999754 59999999986542 22345567788899999 89999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 040845 598 KALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 677 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 677 (824)
.|+|+||+++|+|.++|++.+ .+++.-.+.++.+|+.|++||| +.|||||||||+|||+|++++++|+|||.|+.+
T Consensus 149 LYFvLe~A~nGdll~~i~K~G-sfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccC
Confidence 999999999999999999887 7899999999999999999999 999999999999999999999999999999988
Q ss_pred CCCCCc---------cc--cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhh
Q 040845 678 TGEDQS---------MT--QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDC 746 (824)
Q Consensus 678 ~~~~~~---------~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 746 (824)
.+.... .. ....+||..|.+||++.++..+.++|+|+|||++|+|+.|.+||.+.-+ -..+..+..
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-yliFqkI~~-- 301 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-YLIFQKIQA-- 301 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-HHHHHHHHH--
Confidence 643221 11 1457899999999999999999999999999999999999999976211 111111111
Q ss_pred CCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 747 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....++.+++.+.+|+++.+..||.+|+|++|+.+|
T Consensus 302 ------------------l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 302 ------------------LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred ------------------hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 1122344567789999999999999999999998876
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=353.92 Aligned_cols=261 Identities=30% Similarity=0.435 Sum_probs=209.9
Q ss_pred hccCCCCceeeeccceEEEEEEECC-CcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCC--eeEEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEE--FKALVL 602 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 602 (824)
..+|...+.||+|+||+||.+...+ |+..|||.+........+.+.+|+.+|++++|||||+++|...... .+++.|
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 3457788999999999999998654 8999999987664334677899999999999999999999854444 688999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-CCcEEEeecccccccCC-C
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTG-E 680 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~Dfg~a~~~~~-~ 680 (824)
||+++|+|.+++.+.+..+++..+..+.+||++||+||| +++||||||||+|||++. ++.+||+|||+++.... .
T Consensus 96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 999999999999987767999999999999999999999 999999999999999999 79999999999987653 1
Q ss_pred CCccccccccccccccCccCcCCCC-CCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
..........||+.|||||++..+. ...++||||+||++.||+||++||...... ..++-.....
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~----~~~~~~ig~~---------- 238 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE----AEALLLIGRE---------- 238 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch----HHHHHHHhcc----------
Confidence 1222334577999999999998643 345999999999999999999999874111 1111000000
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRD 807 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 807 (824)
. .....+...+.++.+++.+|++.||++||||.+++++-....+
T Consensus 239 --~--~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 239 --D--SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred --C--CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 0 0012233467789999999999999999999999998766543
No 21
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-43 Score=365.13 Aligned_cols=396 Identities=22% Similarity=0.226 Sum_probs=328.3
Q ss_pred CcEEEccCCcccccccccccCCC--CCCEEeCCCCcCCcccChhhhCcCCCceeeccCCccccccCccccCCCCCccEEE
Q 040845 23 LKVLYLYNNRLQGEIIHEIGHLH--NLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTNNSLSGCLSSITDVGLPNLEVLY 100 (824)
Q Consensus 23 L~~L~L~~n~l~~~~~~~~~~l~--~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~ 100 (824)
-+.|+++++.+....-..+.++- .-+.||+|+|+|+.+.+..|.++++|+.+++.+|.++.+|..... ..+|+.|+
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~~~--sghl~~L~ 131 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRFGHE--SGHLEKLD 131 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhhccccccc--ccceeEEe
Confidence 35678888888743223333332 344588999988888888888888999999988888888776543 55788899
Q ss_pred ccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCCcCcccccccCCCCCCCcEEECcC
Q 040845 101 LWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSSTLDLSFLSSLSNCKSLTHISLSN 180 (824)
Q Consensus 101 L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~~L~~L~Ls~ 180 (824)
|.+|.|+.+-.+.+..++.|+.|||+.|.|+.+.-.+|..-.++++|+|++|+|+.+..+ +|..+.+|..|.|++
T Consensus 132 L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~-----~F~~lnsL~tlkLsr 206 (873)
T KOG4194|consen 132 LRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETG-----HFDSLNSLLTLKLSR 206 (873)
T ss_pred eeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccc-----cccccchheeeeccc
Confidence 999988888788888888899999999988877777788778888999999988887654 477788888888999
Q ss_pred CCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEecCCccCCccchhhcCCCCCCEEEcccccCccc
Q 040845 181 NPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNKLNGSIPITLGKLQKLQDVDLEYNQLEGS 260 (824)
Q Consensus 181 n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 260 (824)
|+|+.+++..|.. .+.|+.|+|..|+|.-.-.-.|..|++|+.|.|..|+|.....++|..+.++++|+|+.|+++..
T Consensus 207 NrittLp~r~Fk~--L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~v 284 (873)
T KOG4194|consen 207 NRITTLPQRSFKR--LPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAV 284 (873)
T ss_pred CcccccCHHHhhh--cchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhh
Confidence 9888877766633 34688888888888766567788999999999999999888888999999999999999999988
Q ss_pred CCccccccCCccEEEccCccccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccccccccccccccccccCcCCcccccc
Q 040845 261 IPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKVLSLGSNELTSIPLN-FWSLKDILDLNLSSNCFSGPLPLEIRNL 339 (824)
Q Consensus 261 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~l 339 (824)
..+++..+++|+.|+++.|.|..+.++..+-.++|++|+|++|+|+.+++. |..+..|+.|+|++|.+.......|..+
T Consensus 285 n~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~l 364 (873)
T KOG4194|consen 285 NEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGL 364 (873)
T ss_pred hcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHh
Confidence 888889999999999999999988888888889999999999999999776 6678999999999999988778889999
Q ss_pred ccchhhhcccccccccCCC---ccCCCCCCCeEEccCccccccCCccccccccccEEEccCcccCCCCcccccCCcccce
Q 040845 340 KALIEIDFSMNNFSGIIPM---EIGSLKNLENLFLEYNRLEGSIPDSFGDLISLKSLNLSYNNLSGTIPVSLEKLSYLKD 416 (824)
Q Consensus 340 ~~L~~L~l~~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 416 (824)
++|+.|||++|.|+..+.+ .|.+|++|+.|+|.+|+|..+...+|.++++|+.|||.+|.|..+-|++|..+ .|+.
T Consensus 365 ssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~ 443 (873)
T KOG4194|consen 365 SSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKE 443 (873)
T ss_pred hhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhh
Confidence 9999999999999876554 47789999999999999997666889999999999999999988889999988 8888
Q ss_pred eeccCCcccCCC
Q 040845 417 LNLSFNKLKGEI 428 (824)
Q Consensus 417 L~l~~N~l~~~~ 428 (824)
|-+..-.+-|.+
T Consensus 444 Lv~nSssflCDC 455 (873)
T KOG4194|consen 444 LVMNSSSFLCDC 455 (873)
T ss_pred hhhcccceEEec
Confidence 888776655543
No 22
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=392.96 Aligned_cols=263 Identities=29% Similarity=0.489 Sum_probs=224.9
Q ss_pred ccCCCCceeeeccceEEEEEEECC--Cc----EEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD--GM----EVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKA 599 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~--~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 599 (824)
...+..+.||+|+||.||+|...+ |. .||||.++... .+...+|.+|+.+|+.++|||||+++|+|-+....+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 445567889999999999998654 43 48999887654 455788999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhhC------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccc
Q 040845 600 LVLEYMPHGSLEKYLHSS------NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 673 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 673 (824)
+++|||++|+|..|+++. ...++..+.+.++.|||+|+.||+ ++++|||||.++|+|+++...+||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccch
Confidence 999999999999999987 467899999999999999999999 99999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcch
Q 040845 674 AKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTM 752 (824)
Q Consensus 674 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 752 (824)
|+.+.+.+++.......-+..|||||.+.++.++.|+|||||||++||++| |..||......+ .+..|
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~-v~~~~---------- 917 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE-VLLDV---------- 917 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH-HHHHH----------
Confidence 997776666655555567789999999999999999999999999999999 777776532211 11111
Q ss_pred hhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhccc
Q 040845 753 EVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSLLRN 812 (824)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 812 (824)
..+.++.+|..|+..++++|..||+.+|++||++..+++.+.++.+....+
T Consensus 918 ---------~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~ 968 (1025)
T KOG1095|consen 918 ---------LEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGT 968 (1025)
T ss_pred ---------HhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccC
Confidence 112277788899999999999999999999999999999999998755443
No 23
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=367.10 Aligned_cols=365 Identities=25% Similarity=0.283 Sum_probs=276.8
Q ss_pred cEEEccCCcccccccccccCCCCCCEEeCCCCcCCcccChhhhCcCCCceeeccCCccccccCccccCCCCCccEEEccC
Q 040845 24 KVLYLYNNRLQGEIIHEIGHLHNLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTNNSLSGCLSSITDVGLPNLEVLYLWG 103 (824)
Q Consensus 24 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~ 103 (824)
+.|++++|++....+..|-++++|+.++|.+|.++ .+|.......+|+.|+|.+|.|+.+..... ..++.|+.||||.
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L-~~l~alrslDLSr 158 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEEL-SALPALRSLDLSR 158 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHH-HhHhhhhhhhhhh
Confidence 34666666666555555666666666666666666 556555555556666666666655444332 1356666666666
Q ss_pred CeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCCcCcccccccCCCCCCCcEEECcCCCC
Q 040845 104 NNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSSTLDLSFLSSLSNCKSLTHISLSNNPL 183 (824)
Q Consensus 104 n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l 183 (824)
|.|+.+.-..|..-.++++|+|++|+|+....+.|.++.+|..|.|++|+|+.+|. .+|+++++|+.|+|..|+|
T Consensus 159 N~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~-----r~Fk~L~~L~~LdLnrN~i 233 (873)
T KOG4194|consen 159 NLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQ-----RSFKRLPKLESLDLNRNRI 233 (873)
T ss_pred chhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCH-----HHhhhcchhhhhhccccce
Confidence 66664444455555566666666666666666666666666666666666666654 2356666666666666666
Q ss_pred CccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEecCCccCCccchhhcCCCCCCEEEcccccCcccCCc
Q 040845 184 DGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNKLNGSIPITLGKLQKLQDVDLEYNQLEGSIPD 263 (824)
Q Consensus 184 ~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 263 (824)
.-+...+|.+ ..+|+.|.|..|.|...-...|..|.++++|+|..|++...-.+++.+++.|+.|+||+|.|..+.++
T Consensus 234 rive~ltFqg--L~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d 311 (873)
T KOG4194|consen 234 RIVEGLTFQG--LPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHID 311 (873)
T ss_pred eeehhhhhcC--chhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecc
Confidence 6555555544 34666666666666666666778889999999999999888888999999999999999999999999
Q ss_pred cccccCCccEEEccCccccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccccccccccccccccccCcCC---cccccc
Q 040845 264 SICLSVELYELELGGNKLSGSIPACFSNMTFLKVLSLGSNELTSIPLN-FWSLKDILDLNLSSNCFSGPLP---LEIRNL 339 (824)
Q Consensus 264 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~l~~N~l~~~~~---~~~~~l 339 (824)
.....++|+.|+|+.|+|+...++.|..+..|++|+|++|.++.+.+. |.++++|+.|||++|.+++.+. ..|.++
T Consensus 312 ~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl 391 (873)
T KOG4194|consen 312 SWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGL 391 (873)
T ss_pred hhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccc
Confidence 999999999999999999988899999999999999999999999766 7789999999999999986554 458889
Q ss_pred ccchhhhcccccccccCCCccCCCCCCCeEEccCccccccCCccccccccccEEEccCc
Q 040845 340 KALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEGSIPDSFGDLISLKSLNLSYN 398 (824)
Q Consensus 340 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 398 (824)
++|+.|+|.+|+|..+...+|.+++.|++|||.+|.|..+.|++|..+ .|++|.+..-
T Consensus 392 ~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSs 449 (873)
T KOG4194|consen 392 PSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSS 449 (873)
T ss_pred hhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhccc
Confidence 999999999999998888899999999999999999998899999999 9999887653
No 24
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=355.03 Aligned_cols=250 Identities=27% Similarity=0.381 Sum_probs=214.4
Q ss_pred ccCCCCceeeeccceEEEEEE-ECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 527 DKFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
..|..-..||+|+.|.||.|+ ..+++.||||++........+-+..|+.+|+..+|+|||.+++.|...+..+.|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 457777899999999999996 4568999999998887777888999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
+||+|.+.+.... +++.++..|++++++||+||| .++|+|||||.+|||++.+|.+||+|||+|..+..... .
T Consensus 353 ~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~--K 425 (550)
T KOG0578|consen 353 EGGSLTDVVTKTR--MTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS--K 425 (550)
T ss_pred CCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccC--c
Confidence 9999999998764 899999999999999999999 99999999999999999999999999999987754332 4
Q ss_pred cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 686 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
....+||+.|||||+.....|+.++||||||++++||+-|.+||-. +..+...... ......
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln----E~PlrAlyLI--------------a~ng~P 487 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN----ENPLRALYLI--------------ATNGTP 487 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC----CChHHHHHHH--------------hhcCCC
Confidence 5567899999999999999999999999999999999999999864 1111111100 011112
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
++..++..+..+.+++.+||..||++|++|.|+++|
T Consensus 488 ~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 488 KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 333445667889999999999999999999999986
No 25
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-42 Score=354.80 Aligned_cols=241 Identities=24% Similarity=0.406 Sum_probs=209.3
Q ss_pred CceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCHH
Q 040845 532 NNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSLE 611 (824)
Q Consensus 532 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 611 (824)
.+-||.|+.|.||+|+.+ ++.||||+++ +.-+.+|+-|++|+||||+.+.|+|.....++||||||..|-|.
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~-------elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVR-------ELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHh-------hhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 456999999999999997 8999999764 22245889999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccc
Q 040845 612 KYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLA 691 (824)
Q Consensus 612 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 691 (824)
++++..+ .+.....+.|..+||.|+.||| .++|||||+|.-|||++.+..|||+|||-++...+. .+.-...|
T Consensus 201 ~VLka~~-~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkMSFaG 273 (904)
T KOG4721|consen 201 EVLKAGR-PITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STKMSFAG 273 (904)
T ss_pred HHHhccC-ccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhh---hhhhhhhh
Confidence 9998776 7888889999999999999999 999999999999999999999999999999876433 23345679
Q ss_pred cccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHH
Q 040845 692 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKE 771 (824)
Q Consensus 692 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 (824)
|+.|||||+++....++|+||||||||||||+||..||.+....- -..........++.|.
T Consensus 274 TVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA-------------------IIwGVGsNsL~LpvPs 334 (904)
T KOG4721|consen 274 TVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA-------------------IIWGVGSNSLHLPVPS 334 (904)
T ss_pred hHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe-------------------eEEeccCCcccccCcc
Confidence 999999999999999999999999999999999999987632110 0011234446677888
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 772 QCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 772 ~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
.|+..+.-|++.||+..|..||+|.+++.||+-+.
T Consensus 335 tcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 335 TCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred cCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcC
Confidence 99999999999999999999999999999998543
No 26
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=335.67 Aligned_cols=262 Identities=25% Similarity=0.337 Sum_probs=214.6
Q ss_pred hccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
.+.|+....||.|..++||+|+. ..++.||||++..+. ....+.+++|+..|+.++||||++++..|..+...++||+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 46799999999999999999974 568999999998774 3446889999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 604 YMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||.+|++.+.+...- ..+++..+..|.++++.||.||| .+|.||||||+.|||++.+|.|||+|||.+..+...+.
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 999999999997543 57899999999999999999999 99999999999999999999999999998776654432
Q ss_pred c-ccc-ccccccccccCccCcCC--CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcccc
Q 040845 683 S-MTQ-TQTLATIGYMAPEYGRE--GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDAN 758 (824)
Q Consensus 683 ~-~~~-~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (824)
. ... ...+||+.|||||+++. ..|+.|+||||||+...|+.+|..||....+.++-+...-. ..|.....
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn-~pp~~~t~----- 255 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQN-DPPTLLTS----- 255 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC-CCCCcccc-----
Confidence 2 122 45679999999999653 36899999999999999999999999886655443333211 11111110
Q ss_pred ccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 759 LLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....+...++..+.+++..|+..||++||||++++++
T Consensus 256 -----~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 256 -----GLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred -----cCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 11112223455689999999999999999999999875
No 27
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-41 Score=355.39 Aligned_cols=250 Identities=26% Similarity=0.369 Sum_probs=212.5
Q ss_pred hccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
..-|+.++-||.|+.|.|..|++ .+|+.+|||++.+.. ......+.+|+-+|+-+.|||++++++++++..++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 35678899999999999999974 579999999986542 22356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
.||+++|.|.+++-+.+ ++++.++.++++||+.|+.|+| ..+|+|||+||+|+|+|..+++||+|||+|..-.++.
T Consensus 91 lEyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred EEecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 99999999999998877 7889999999999999999999 9999999999999999999999999999998643222
Q ss_pred CccccccccccccccCccCcCCCCC-CccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 682 QSMTQTQTLATIGYMAPEYGREGQV-STNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
-....+|++.|.|||++++..| +.++||||.|||+|.++||+.||++ ..+.... .
T Consensus 167 ---lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir~LL----------------l 222 (786)
T KOG0588|consen 167 ---LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIRVLL----------------L 222 (786)
T ss_pred ---cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHHHHH----------------H
Confidence 2234579999999999999988 7899999999999999999999985 1222111 1
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 761 SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
.-+...+..|.+.+.++.+|+.+|+.+||++|.|++||++|-.
T Consensus 223 KV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~ 265 (786)
T KOG0588|consen 223 KVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPF 265 (786)
T ss_pred HHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCch
Confidence 1112233445677888999999999999999999999999854
No 28
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-40 Score=345.51 Aligned_cols=264 Identities=25% Similarity=0.434 Sum_probs=222.7
Q ss_pred hccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccc-hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGR-AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
.....+.++||+|.||+|..+....+..||||.++..... ...+|.+|+++|.+++||||++++|+|..++..++|+||
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 3456677899999999999999887899999999877543 458899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCC-CCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSSNYS-LDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|++|+|.+|+.++..+ .+....++|+.|||+|++||. +.++||||+.++|+|++.++++||+|||+++.+...+++
T Consensus 617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCce
Confidence 9999999999887533 356677889999999999999 999999999999999999999999999999988888888
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh--CCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT--RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
......+-+.+|||||.+..++++.++|||+||+.+||+++ ...||....... ..+-.....+.+
T Consensus 694 ~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--vven~~~~~~~~----------- 760 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--VVENAGEFFRDQ----------- 760 (807)
T ss_pred eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--HHHhhhhhcCCC-----------
Confidence 77777888999999999999999999999999999999866 677887643321 111111111111
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
....-+.+|.-|+..++++|.+||..|-++||+++++...|++.
T Consensus 761 ~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 761 GRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11122345668999999999999999999999999999998763
No 29
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.4e-40 Score=357.78 Aligned_cols=260 Identities=25% Similarity=0.422 Sum_probs=206.1
Q ss_pred hccCCCCceeeeccceEEEEEEE------CCCcEEEEEEeecccc-chhhhHHHHHHHHhcC-CCCcceeEEeeeecC-C
Q 040845 526 TDKFSENNLIGRGGFGSVYKARI------RDGMEVAVKVFNLQCG-RAFKSFDVECAMMKSI-RHRNLVKVISSCSNE-E 596 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~ 596 (824)
.++|++.+.||+|+||.||+|.+ .+++.||||+++.... ...+.+.+|+.+++.+ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 46799999999999999999974 2356899999864322 3345688899999999 899999999988764 4
Q ss_pred eeEEEEeccCCCCHHHHhhhCC----------------------------------------------------------
Q 040845 597 FKALVLEYMPHGSLEKYLHSSN---------------------------------------------------------- 618 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 618 (824)
..++||||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 5789999999999999987532
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccccccc
Q 040845 619 ---YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGY 695 (824)
Q Consensus 619 ---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y 695 (824)
..+++.++..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++...............++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 23778889999999999999999 999999999999999999999999999999866433332223334567889
Q ss_pred cCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHH
Q 040845 696 MAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCV 774 (824)
Q Consensus 696 ~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 774 (824)
+|||++.+..++.++|||||||++|||++ |..||......+. ...... +.. ....+..++
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-~~~~~~-----------~~~-------~~~~~~~~~ 303 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-FCQRLK-----------DGT-------RMRAPENAT 303 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-HHHHHh-----------cCC-------CCCCCCCCC
Confidence 99999998899999999999999999997 9999875322111 111000 000 001122456
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 040845 775 SFVFNLALECTVESPEQRINAKEIVAKLLKIRD 807 (824)
Q Consensus 775 ~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 807 (824)
..+.+++.+||..||++|||+.|+++.|+++.+
T Consensus 304 ~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 304 PEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 678999999999999999999999999998765
No 30
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-40 Score=323.56 Aligned_cols=269 Identities=23% Similarity=0.280 Sum_probs=206.5
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccc--hhhhHHHHHHHHhcCCCCcceeEEeeeec--CCeeEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGR--AFKSFDVECAMMKSIRHRNLVKVISSCSN--EEFKAL 600 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 600 (824)
.++|+..+.|++|+||.||+|+++ +++.||+|+++..... ..-...+||.++.+.+|||||.+-.+... -+..|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 356788899999999999999865 5889999999766422 22345789999999999999999988754 467999
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
|||||++ +|..+++.-..++...++..++.|+++|++||| ...|+|||+|++|+|+...|.+||+|||+|+.+...
T Consensus 155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 9999987 999999988889999999999999999999999 899999999999999999999999999999987533
Q ss_pred CCccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhC-CCc-------c
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCL-PIS-------T 751 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~-------~ 751 (824)
....+..+.|.||+|||.+.+. .|+.+.|+||+|||+.|++++++-|.+..+-+. +..+++... |.. .
T Consensus 231 --~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQ-l~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 231 --LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQ-LDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred --cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHH-HHHHHHHhCCCccccCCCccc
Confidence 3456677899999999988765 589999999999999999999988766322211 111111110 110 0
Q ss_pred hhhccccccCchh---hhhhhHH-HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 752 MEVVDANLLSQED---IHFVAKE-QCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 752 ~~~~~~~~~~~~~---~~~~~~~-~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...+...-..... .+...+. ..+..-++|+..++.+||.+|.||.|.+++
T Consensus 308 lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 308 LPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred cchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 0101000001111 1111111 134678899999999999999999999876
No 31
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-41 Score=357.29 Aligned_cols=260 Identities=28% Similarity=0.421 Sum_probs=214.8
Q ss_pred hccCCCCceeeeccceEEEEEEECC--C---cEEEEEEeecc---ccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD--G---MEVAVKVFNLQ---CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEF 597 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~--~---~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 597 (824)
.++....++||+|+||.||+|+++. + ..||||..+.. .......+.+|+++|+.++|||||+++|++..+..
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 3445566899999999999998653 2 23899998752 24567789999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 040845 598 KALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 677 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 677 (824)
.++|||+|.||+|.+++......++..++..++.++|+||+||| +++++||||.++|+|++.++.+||+|||+++.-
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 99999999999999999988877999999999999999999999 999999999999999999999999999998753
Q ss_pred CCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhh-hhhCCCcchhhc
Q 040845 678 TGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWV-NDCLPISTMEVV 755 (824)
Q Consensus 678 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 755 (824)
. ..........-+..|+|||.+..+.|+.++|||||||++||+++ |..||.+.... ....++ ...
T Consensus 313 ~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~kI~~~~--------- 379 (474)
T KOG0194|consen 313 S--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKAKIVKNG--------- 379 (474)
T ss_pred c--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHHHHHhcC---------
Confidence 2 12222223357889999999999999999999999999999999 78888764322 222222 211
Q ss_pred cccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhc
Q 040845 756 DANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSLL 810 (824)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 810 (824)
.+...+...+..+..++.+||..+|++||+|.++.+.++.+.....
T Consensus 380 ---------~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 380 ---------YRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ---------ccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 1222233457788999999999999999999999999999976544
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-40 Score=351.54 Aligned_cols=254 Identities=24% Similarity=0.347 Sum_probs=207.5
Q ss_pred hhccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeecc----cc-chhhhHHHHHHHHhcCC-CCcceeEEeeeecCCe
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQ----CG-RAFKSFDVECAMMKSIR-HRNLVKVISSCSNEEF 597 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 597 (824)
...+|.+.+.||+|+||+|+.|.. .+++.||+|++... .. ...+.+.+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 457899999999999999999964 46899999977553 11 23456778999999999 9999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC-CcEEEeecccccc
Q 040845 598 KALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFGIAKL 676 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~Dfg~a~~ 676 (824)
.++||||+.+|+|.+++.. ...+.+.++..+++|+++|++||| +++|+||||||+||+++.+ +++||+|||++..
T Consensus 95 ~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred EEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 9999999999999999998 447889999999999999999999 9999999999999999999 9999999999987
Q ss_pred cCCCCCccccccccccccccCccCcCCCC-C-CccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhh
Q 040845 677 LTGEDQSMTQTQTLATIGYMAPEYGREGQ-V-STNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEV 754 (824)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~-~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (824)
.. ..........||+.|+|||++.+.. | +.++||||+||++|-|++|+.||++...... ...+..
T Consensus 171 ~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l-~~ki~~---------- 237 (370)
T KOG0583|consen 171 SP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNL-YRKIRK---------- 237 (370)
T ss_pred cC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHH-HHHHhc----------
Confidence 63 1222334567999999999999877 7 5889999999999999999999987211111 111111
Q ss_pred ccccccCchhhhhhhHHHH-HHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 755 VDANLLSQEDIHFVAKEQC-VSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
.....|..+ +.++..++.+|+..||.+|+|+.|++ .-.-++
T Consensus 238 ----------~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~ 279 (370)
T KOG0583|consen 238 ----------GEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQ 279 (370)
T ss_pred ----------CCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh-hChhhc
Confidence 011112223 56789999999999999999999999 333333
No 33
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=7.8e-41 Score=345.24 Aligned_cols=247 Identities=28% Similarity=0.430 Sum_probs=209.8
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
++|.+.+.||+|.||.||+|+.+ +.+.||+|.+.+..+ +..+.+.+|+++++.++||||+.++++|+...+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57888899999999999999755 588999999875533 345678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|+.| +|..++...+ .++++.+..++.+++.||.||| +.+|.|||+||.||+++..|.+|+||||+|+.+.. ..
T Consensus 82 ~a~g-~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG-KLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST--NT 154 (808)
T ss_pred hhhh-hHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhccc--Cc
Confidence 9976 9999998766 7999999999999999999999 99999999999999999999999999999997643 34
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
...+...||+-|||||...++.|+..+|+||+||++||+++|++||... .+.+.++.+..+...
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~d~v~----------- 218 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILKDPVK----------- 218 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhcCCCC-----------
Confidence 4556678999999999999999999999999999999999999999762 122222222211110
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.|...+..+.++++..+..||.+|.|..+++.|
T Consensus 219 -----~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 219 -----PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred -----CcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 112456678999999999999999999998865
No 34
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.9e-40 Score=343.41 Aligned_cols=254 Identities=26% Similarity=0.355 Sum_probs=206.3
Q ss_pred hhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
..++|+.++.||+|+||.||.|+-+ +|..+|+|++++.. ....+.++.|-.+|....+|.||+++..|++.+..|+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 3578999999999999999999755 59999999997652 4456778889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
||||++||++..+|.+.+ .+++..+..++.+++.|+..+| +.|+|||||||+|+|+|..|++||+|||++.-+...
T Consensus 219 iMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 999999999999998877 7899999999999999999999 999999999999999999999999999998543210
Q ss_pred ----------------------CCcc----cc-------------------ccccccccccCccCcCCCCCCccchHHHH
Q 040845 681 ----------------------DQSM----TQ-------------------TQTLATIGYMAPEYGREGQVSTNGDVYSF 715 (824)
Q Consensus 681 ----------------------~~~~----~~-------------------~~~~~~~~y~aPE~~~~~~~~~~~Dvwsl 715 (824)
+... .. -..+|||.|+|||++.+..|+..+|.||+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 0000 00 13469999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCC-
Q 040845 716 GIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRIN- 794 (824)
Q Consensus 716 G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt- 794 (824)
|||+|||+.|.+||......+ ....+++.. .....+....++.++.+||.+|+. ||++|..
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~-T~rkI~nwr----------------~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~ 436 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQE-TYRKIVNWR----------------ETLKFPEEVDLSDEAKDLITRLLC-DPENRLGS 436 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh----------------hhccCCCcCcccHHHHHHHHHHhc-CHHHhcCc
Confidence 999999999999998743322 122111110 011111222345778999999999 9999995
Q ss_pred --HHHHHH
Q 040845 795 --AKEIVA 800 (824)
Q Consensus 795 --~~evl~ 800 (824)
++||.+
T Consensus 437 ~G~~EIK~ 444 (550)
T KOG0605|consen 437 KGAEEIKK 444 (550)
T ss_pred ccHHHHhc
Confidence 555554
No 35
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-40 Score=316.18 Aligned_cols=238 Identities=26% Similarity=0.335 Sum_probs=202.1
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
.++|+..+.||.|+||.|..++.+ +|..+|+|++++.. -+..+....|..+++.+.||+++++.+.+.+....|+|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 356888899999999999999866 48999999997653 23345667799999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||++||.|..++++.+ ++++..+..+|.||+.|++||| +.+|++||+||+|||+|.+|.+||+|||+|+.+.+.
T Consensus 123 meyv~GGElFS~Lrk~~-rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r- 197 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSG-RFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR- 197 (355)
T ss_pred EeccCCccHHHHHHhcC-CCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc-
Confidence 99999999999999877 7899999999999999999999 999999999999999999999999999999987533
Q ss_pred CccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 682 QSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
....+||+.|+|||++....|..++|.|||||++|||+.|.+||...-. ......++..
T Consensus 198 ----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-~~iY~KI~~~---------------- 256 (355)
T KOG0616|consen 198 ----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-IQIYEKILEG---------------- 256 (355)
T ss_pred ----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-HHHHHHHHhC----------------
Confidence 2235699999999999999999999999999999999999999987322 1111111111
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCC
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRI 793 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 793 (824)
+...|...+.++.+|+.+.+++|-.+|.
T Consensus 257 ----~v~fP~~fs~~~kdLl~~LL~vD~t~R~ 284 (355)
T KOG0616|consen 257 ----KVKFPSYFSSDAKDLLKKLLQVDLTKRF 284 (355)
T ss_pred ----cccCCcccCHHHHHHHHHHHhhhhHhhh
Confidence 1122345567789999999999999993
No 36
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-40 Score=310.16 Aligned_cols=249 Identities=25% Similarity=0.334 Sum_probs=212.0
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
.++|++++.||+|.||.||.|+.+ ++-.||+|++.+.. .+...++.+|+++.+.|+||||.+++++|.++...|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 467899999999999999999865 57889999986542 34456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 602 LEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
+||..+|.+...++..+ ..+++.....+..|+|.|+.|+| .++|+||||||+|+|++..+.+|++|||.+..-.
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 99999999999998544 46888999999999999999999 9999999999999999999999999999997532
Q ss_pred CCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
.......+||..|.|||...+..++..+|+|++|++.||++.|.+||+... .+..+..+...
T Consensus 176 --~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~--------------- 237 (281)
T KOG0580|consen 176 --SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKV--------------- 237 (281)
T ss_pred --CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHc---------------
Confidence 233445679999999999999999999999999999999999999998754 22222222211
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 761 SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
+...|...+..+.++|.+|+..+|.+|.+..|++++=
T Consensus 238 -----~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 238 -----DLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred -----cccCCcccChhHHHHHHHHhccCccccccHHHHhhhH
Confidence 1122344567789999999999999999999999874
No 37
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=339.96 Aligned_cols=246 Identities=22% Similarity=0.309 Sum_probs=200.7
Q ss_pred CceeeeccceEEEEEEECCCcEEEEEEeeccccch---hhhHHHHHHHHhcCCCCcceeEEeeeec----CCeeEEEEec
Q 040845 532 NNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRA---FKSFDVECAMMKSIRHRNLVKVISSCSN----EEFKALVLEY 604 (824)
Q Consensus 532 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~ 604 (824)
...||+|++|.||+|.+. |+.||||+++...... .+.+.+|+.++++++||||+++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIFN-NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEEC-CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 368999999999999984 8999999987543222 4678899999999999999999999866 3467899999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
+++|+|.+++.... .+++.....++.|++.|++||| + .+++||||||+||++++++.+||+|||++.......
T Consensus 104 ~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 104 CTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred CCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc--
Confidence 99999999998754 7889999999999999999999 6 488999999999999999999999999998654322
Q ss_pred cccccccccccccCccCcCC--CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 684 MTQTQTLATIGYMAPEYGRE--GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||......+. ........
T Consensus 178 ---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~-~~~i~~~~--------------- 238 (283)
T PHA02988 178 ---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI-YDLIINKN--------------- 238 (283)
T ss_pred ---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhcC---------------
Confidence 12357889999999876 6789999999999999999999999976321110 11110000
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
.+...+..++..+.+++.+||+.||++|||++|+++.|+.++
T Consensus 239 ---~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 239 ---NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred ---CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 001112246778999999999999999999999999999875
No 38
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-40 Score=327.64 Aligned_cols=273 Identities=26% Similarity=0.338 Sum_probs=209.8
Q ss_pred HHHHhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEee--ccccchhhhHHHHHHHHhcCCCCcceeEEeeeec---
Q 040845 521 ELFQATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFN--LQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSN--- 594 (824)
Q Consensus 521 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--- 594 (824)
+.+.....|...+.||+|+||.|+.|..+ +|+.||||.+. .......++..+|+++++.++|+||+.+.+++..
T Consensus 16 ~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~ 95 (359)
T KOG0660|consen 16 ELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR 95 (359)
T ss_pred eEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence 34555677777899999999999999764 68999999986 3334456778899999999999999999999854
Q ss_pred --CCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecc
Q 040845 595 --EEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 672 (824)
Q Consensus 595 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 672 (824)
-...|+|+|+| +.+|...++... .++...+..+++|+++|+.|+| +.+|+|||+||.|++++.+..+||+|||
T Consensus 96 ~~f~DvYiV~elM-etDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFG 170 (359)
T KOG0660|consen 96 DKFNDVYLVFELM-ETDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFG 170 (359)
T ss_pred cccceeEEehhHH-hhHHHHHHHcCc-cccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEecccc
Confidence 46789999999 559999998765 6899999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccCccCcC-CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcc
Q 040845 673 IAKLLTGEDQSMTQTQTLATIGYMAPEYGR-EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIST 751 (824)
Q Consensus 673 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 751 (824)
+|+...........+.++.|.||+|||++. ...|+.+.||||.|||++||++|++-|.+... ...-..+....+...
T Consensus 171 LAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~--v~Ql~lI~~~lGtP~ 248 (359)
T KOG0660|consen 171 LARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDY--VHQLQLILELLGTPS 248 (359)
T ss_pred ceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCch--HHHHHHHHHhcCCCC
Confidence 999876543344557888999999999765 45799999999999999999999997765211 110111111111110
Q ss_pred ---hhhcc-----cccc-----CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 752 ---MEVVD-----ANLL-----SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 752 ---~~~~~-----~~~~-----~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...+. +.+. ......... ++..+.+.+|+.+|+..||.+|+|++|+++|
T Consensus 249 ~e~l~~i~s~~ar~yi~slp~~p~~~f~~~f-p~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 249 EEDLQKIRSEKARPYIKSLPQIPKQPFSSIF-PNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHHhccHHHHHHHHhCCCCCCCCHHHHc-CCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 01111 0000 000001111 2567789999999999999999999999886
No 39
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=329.09 Aligned_cols=285 Identities=26% Similarity=0.386 Sum_probs=218.4
Q ss_pred ccHHHHHHhhccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcC--CCCcceeEEeeeec
Q 040845 517 FSYLELFQATDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSI--RHRNLVKVISSCSN 594 (824)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~ 594 (824)
.++.-......+..+.+.||+|.||+||+|+|+ |+.||||+|.. .+.+++.+|.++++.+ +|+||..++++-..
T Consensus 201 lplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~ 276 (513)
T KOG2052|consen 201 LPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNK 276 (513)
T ss_pred chhHhHHhhhheeEEEEEecCccccceeecccc-CCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhcccc
Confidence 344445566678888999999999999999998 99999999974 3345667777777754 99999999988543
Q ss_pred C----CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhh-----cCCCCCeEecCCCCCCeeeCCCCc
Q 040845 595 E----EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLH-----FGYSAPVIHCDLKPSNVLLDDNMV 665 (824)
Q Consensus 595 ~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH-----~~~~~~ivH~Dlk~~Nill~~~~~ 665 (824)
+ ...++|++|.+.|+|.||+.+. .++....++++..+|.||++|| ++.++.|.|||||+.|||+.+++.
T Consensus 277 ~~gs~TQLwLvTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~ 354 (513)
T KOG2052|consen 277 DNGSWTQLWLVTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 354 (513)
T ss_pred CCCceEEEEEeeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc
Confidence 3 3678999999999999999874 6999999999999999999999 456889999999999999999999
Q ss_pred EEEeecccccccCCCCCc--cccccccccccccCccCcCCCC----C--CccchHHHHHHHHHHHHhCCCCCcccccCcc
Q 040845 666 AHLSDFGIAKLLTGEDQS--MTQTQTLATIGYMAPEYGREGQ----V--STNGDVYSFGIMLMETFTRKKPTDELFNGEM 737 (824)
Q Consensus 666 ~kl~Dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~----~--~~~~DvwslG~~l~el~tg~~p~~~~~~~~~ 737 (824)
+.|+|+|+|..+...... ......+||.+|||||++.+.- + -..+||||||.|+||+..+..--+-..+...
T Consensus 355 C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~ 434 (513)
T KOG2052|consen 355 CCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQL 434 (513)
T ss_pred EEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcC
Confidence 999999999887644222 3345678999999999886431 2 2458999999999999764321111111111
Q ss_pred hhhhhhhhhCCCc-chhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 040845 738 TLKHWVNDCLPIS-TMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRD 807 (824)
Q Consensus 738 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 807 (824)
.+.+|+......+ ..+++............+....+...+.++|+.||..+|..|.||-.+.+.|.++.+
T Consensus 435 Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 435 PYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 2222332222222 234555544554444555556788889999999999999999999999999999865
No 40
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-39 Score=327.52 Aligned_cols=279 Identities=26% Similarity=0.335 Sum_probs=213.4
Q ss_pred ccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhc--CCCCcceeEEeeeecCC----eeEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKS--IRHRNLVKVISSCSNEE----FKAL 600 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~l 600 (824)
...+..++||+|.||.||+|++. ++.||||++.. +..+.+..|-+|++. ++|+||++++++-.... .+++
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 34556678999999999999987 69999999974 445677777777665 48999999999875544 7889
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcC------CCCCeEecCCCCCCeeeCCCCcEEEeecccc
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFG------YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 674 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~------~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 674 (824)
|+||.+.|+|.+|+..+ ..+|.+.-+++..+++||+|||++ .+++|+|||||++|||+.+|+++.|+|||+|
T Consensus 286 Vt~fh~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred EeeeccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 99999999999999876 589999999999999999999954 3678999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCccCcCCCCC------CccchHHHHHHHHHHHHhCCCCCcc--cccCcchhhhhhhhh
Q 040845 675 KLLTGEDQSMTQTQTLATIGYMAPEYGREGQV------STNGDVYSFGIMLMETFTRKKPTDE--LFNGEMTLKHWVNDC 746 (824)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~------~~~~DvwslG~~l~el~tg~~p~~~--~~~~~~~~~~~~~~~ 746 (824)
..+............+||.+|||||++.+... -.+.||||+|.|+|||+++...++. ..+-...+..-+...
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 99876655555556889999999999876532 1368999999999999998765532 111222222222222
Q ss_pred CCCcc-hhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhcc
Q 040845 747 LPIST-MEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSLLR 811 (824)
Q Consensus 747 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 811 (824)
..... .+.+-.+..+..-...+........+.+.+..||..||+.|.||.=|-+++.++......
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 21111 122222222222233444446677899999999999999999999999999988765543
No 41
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-40 Score=340.58 Aligned_cols=257 Identities=27% Similarity=0.450 Sum_probs=221.9
Q ss_pred hccCCCCceeeeccceEEEEEEECC---C--cEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD---G--MEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKA 599 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~---~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 599 (824)
.+.....++||+|.||.||+|.+-+ | -.||||.-+.++ ....+.|..|+.+|+.++||||++++|+|.+. ..+
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~W 466 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMW 466 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-cee
Confidence 3444556789999999999997543 3 358999887754 34578899999999999999999999999765 467
Q ss_pred EEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 600 LVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
+|||.++.|.|.+|++.....++......++.||..|++||| +.++|||||.++|||+.....+|++|||+++.+.+
T Consensus 467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 999999999999999998889999999999999999999999 99999999999999999999999999999998865
Q ss_pred CCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhcccc
Q 040845 680 EDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDAN 758 (824)
Q Consensus 680 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (824)
...+. .+...-+..|||||.+.-.+++.++|||-|||++||+++ |..||.+....+. .
T Consensus 544 ~~yYk-aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV--------------------I 602 (974)
T KOG4257|consen 544 DAYYK-ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV--------------------I 602 (974)
T ss_pred cchhh-ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce--------------------E
Confidence 55443 334557889999999999999999999999999999987 8899987543321 1
Q ss_pred ccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 040845 759 LLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRD 807 (824)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 807 (824)
..-+.+.+++.|++|++.++.||.+||.++|.+||++.|+...|.++++
T Consensus 603 ~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 603 GHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred EEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 2234556788889999999999999999999999999999999999876
No 42
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.1e-40 Score=324.91 Aligned_cols=249 Identities=23% Similarity=0.336 Sum_probs=209.7
Q ss_pred hccCCCCceeeeccceEEEEEE-ECCCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
..+|++.+.||+|.||.|-+|. ...|+.||||.+++.. .+..-.+++|++||+.|+||||+.++.+|++.+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 3568888999999999999997 4679999999987653 33445688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||..+|.|.+|+.+.+ .+++.++..+++||++|+.|+| +.+++|||+|.+|||+|.++++||+|||++-.+....
T Consensus 132 MEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k 207 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK 207 (668)
T ss_pred EEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhcccc
Confidence 99999999999999877 8999999999999999999999 9999999999999999999999999999998775333
Q ss_pred CccccccccccccccCccCcCCCCC-CccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 682 QSMTQTQTLATIGYMAPEYGREGQV-STNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
.....+|++-|.+||++.+..| ++.+|-||+||++|-++.|..||++.. ....++..-...
T Consensus 208 ---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D-----hk~lvrQIs~Ga---------- 269 (668)
T KOG0611|consen 208 ---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD-----HKRLVRQISRGA---------- 269 (668)
T ss_pred ---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch-----HHHHHHHhhccc----------
Confidence 3345679999999999999888 788999999999999999999998732 222222111110
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 761 SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
++. +.-+....-||++|+.++|++|.|+.+|..|-+
T Consensus 270 ----YrE---P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 270 ----YRE---PETPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred ----ccC---CCCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 110 111445677999999999999999999988764
No 43
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.3e-39 Score=320.31 Aligned_cols=273 Identities=25% Similarity=0.307 Sum_probs=207.2
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCc-ceeEEeeeecCC-----
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRN-LVKVISSCSNEE----- 596 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~----- 596 (824)
...|+..++||+|+||+||+|+.+ +|+.||+|+++.... .......+|+.+++.++|+| |+++++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 445666788999999999999754 689999999987644 24566789999999999999 999999998877
Q ss_pred -eeEEEEeccCCCCHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecc
Q 040845 597 -FKALVLEYMPHGSLEKYLHSSN---YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 672 (824)
Q Consensus 597 -~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 672 (824)
..++|+||++. +|.+++.... ...+...+..++.|+++|++||| +++|+||||||.||+++++|.+||+|||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccc
Confidence 88999999955 9999998766 46788889999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhC-CCc
Q 040845 673 IAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCL-PIS 750 (824)
Q Consensus 673 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~ 750 (824)
+|+.+.-+ ....++.++|.+|+|||++.+. .|+..+||||+||+++||+++++-|.+..+-+ .+..+.+..- |..
T Consensus 166 lAra~~ip--~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~-ql~~If~~lGtP~e 242 (323)
T KOG0594|consen 166 LARAFSIP--MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID-QLFRIFRLLGTPNE 242 (323)
T ss_pred hHHHhcCC--cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH-HHHHHHHHcCCCCc
Confidence 99965422 2335677899999999998877 68999999999999999999998776533211 1111111111 100
Q ss_pred --c-----hhhccccccCchhhhhhhH--HHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHH
Q 040845 751 --T-----MEVVDANLLSQEDIHFVAK--EQCVSFVFNLALECTVESPEQRINAKEIVAK--LLKI 805 (824)
Q Consensus 751 --~-----~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~ 805 (824)
. ....+.........+.... ........+++.+|++++|.+|.||+.+++| +..+
T Consensus 243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 0 0001100000000000000 1112468899999999999999999999987 5544
No 44
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=333.54 Aligned_cols=249 Identities=28% Similarity=0.404 Sum_probs=209.6
Q ss_pred ccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 527 DKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
..|...+.||+|.||.||+|.. ++++.||+|++..+.. ...+++++|+.++..++++||.++|+.+..+...+++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 4567778999999999999975 4689999999987753 4578899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+.||++.+.+.... .+++.++..+++++..|+.||| ..+.+|||||+.||++..+|.+|++|||.+..+.....
T Consensus 93 ~~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~-- 166 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGN-ILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK-- 166 (467)
T ss_pred hcCcchhhhhccCC-CCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhh--
Confidence 99999999998765 4478888889999999999999 99999999999999999999999999999987753322
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchh
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
.....+||+.|||||++....|+.|+||||+|++.+||.+|.+|+....+... ...+.. ...
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv--------------lflIpk----~~P 228 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV--------------LFLIPK----SAP 228 (467)
T ss_pred ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE--------------EEeccC----CCC
Confidence 22557899999999999988999999999999999999999999987544211 100000 000
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
..+. ..++..+.+++..|+..||+.||+|.+++++
T Consensus 229 P~L~--~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 229 PRLD--GDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred Cccc--cccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 1111 1567779999999999999999999999876
No 45
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=6.9e-39 Score=349.85 Aligned_cols=257 Identities=24% Similarity=0.389 Sum_probs=205.0
Q ss_pred hccCCCCceeeeccceEEEEEEE------CCCcEEEEEEeeccc-cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARI------RDGMEVAVKVFNLQC-GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEF 597 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 597 (824)
.++|++.+.||+|+||.||+|++ .++..||||+++... ....+.+.+|+.+++.+ +||||+++++++.+...
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45788999999999999999974 235689999986442 23446788899999999 89999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhhCC-----------------------------------------------------------
Q 040845 598 KALVLEYMPHGSLEKYLHSSN----------------------------------------------------------- 618 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------- 618 (824)
.++||||+++|+|.+++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 999999999999999986432
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 619 ---------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 619 ---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
..+++.++..++.||++|++||| +.+|+||||||+||+++.++.+||+|||++.........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 14678889999999999999999 999999999999999999999999999999876433322
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
.......++..|+|||.+.+..++.++|||||||++|||++ |..||...... .....++.....
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-~~~~~~~~~~~~-------------- 335 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-SKFYKMIKEGYR-------------- 335 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-HHHHHHHHhCcc--------------
Confidence 22223345678999999999999999999999999999998 88888653221 112222111100
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
...+...+.++.+++.+||+.||++|||+.|+++.|++
T Consensus 336 ----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 336 ----MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ----CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 00112235678999999999999999999999999986
No 46
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=9.9e-39 Score=339.87 Aligned_cols=261 Identities=24% Similarity=0.427 Sum_probs=203.2
Q ss_pred ccCCCCceeeeccceEEEEEEECC-----------------CcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD-----------------GMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKV 588 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l 588 (824)
++|.+.+.||+|+||.||+|.+++ +..||+|++..... .....+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578889999999999999997542 33699999875432 234578899999999999999999
Q ss_pred EeeeecCCeeEEEEeccCCCCHHHHhhhCC------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 040845 589 ISSCSNEEFKALVLEYMPHGSLEKYLHSSN------------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIH 650 (824)
Q Consensus 589 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 650 (824)
++++.+.+..++||||+++|+|.+++.... ..+++.++..++.|++.|++||| +.+|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 999999999999999999999999986432 24677889999999999999999 999999
Q ss_pred cCCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh--CCCC
Q 040845 651 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT--RKKP 728 (824)
Q Consensus 651 ~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t--g~~p 728 (824)
|||||+||+++.++.+||+|||++................++..|+|||++..+.++.++||||||+++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999986644333222233446788999999988889999999999999999987 4566
Q ss_pred CcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 729 TDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
|...... .....+......... ......+..++..+.+++.+||..||++|||+.|+.+.|+
T Consensus 242 ~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 242 YGELTDE--QVIENAGEFFRDQGR-----------QVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCcCCHH--HHHHHHHHHhhhccc-----------cccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 6653211 111111111000000 0001112346678999999999999999999999998875
No 47
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=304.84 Aligned_cols=260 Identities=22% Similarity=0.300 Sum_probs=211.5
Q ss_pred hccCCCCceeeeccceEEEEEE-ECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecC-----CeeE
Q 040845 526 TDKFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNE-----EFKA 599 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 599 (824)
.++|.+.+.+|+|||+-||.++ ..+++.||+|++.-...+..+...+|++..++++|||+++++++...+ +..|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 4689999999999999999997 567899999998777667788899999999999999999999987433 4589
Q ss_pred EEEeccCCCCHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEecCCCCCCeeeCCCCcEEEeecccc
Q 040845 600 LVLEYMPHGSLEKYLHSSN---YSLDIFQRLNIMIDVASALEYLHFGYSAP--VIHCDLKPSNVLLDDNMVAHLSDFGIA 674 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl~Dfg~a 674 (824)
++++|+..|+|.+.+.+.. ..+++.+++.|+.+|++||++|| +.. ++||||||.||++.+++.+++.|||.+
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH---~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALH---EKEPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHh---ccCCcccccCCCcceeEecCCCceEEEeccCc
Confidence 9999999999999987543 57899999999999999999999 555 999999999999999999999999998
Q ss_pred cccCCCCCc-------cccccccccccccCccCcC---CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhh
Q 040845 675 KLLTGEDQS-------MTQTQTLATIGYMAPEYGR---EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVN 744 (824)
Q Consensus 675 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~ 744 (824)
+...-.-.. ........|..|+|||.+. +...++++|||||||++|+|+.|..||+..++.+..+.--+
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv- 255 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAV- 255 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEee-
Confidence 765321111 1223445789999999875 44678999999999999999999999987655333222111
Q ss_pred hhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 745 DCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
.. .....+....+++.+.++++.|++.||.+||++.+++.+++++
T Consensus 256 ----------~n------~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 256 ----------QN------AQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred ----------ec------cccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 11 1112222223678899999999999999999999999998775
No 48
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-41 Score=311.72 Aligned_cols=254 Identities=23% Similarity=0.351 Sum_probs=207.0
Q ss_pred hccCCCCceeeeccceEEEEEE-ECCCcEEEEEEeecc--ccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQ--CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
.++|++.+.||+|+|+.||++. ..+|+.+|+|.+... .....+.+.+|+.|-+.|+||||+++.+...++...|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 4678888899999999999995 456999999987533 3456788999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC---CCCcEEEeecccccccCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~Dfg~a~~~~~ 679 (824)
|+|+|++|..-+-.. ..+++..+-..++||++++.|+| ..+|||||+||+|+++. ..-.+|++|||+|..+.
T Consensus 90 e~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~- 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN- 164 (355)
T ss_pred ecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEeC-
Confidence 999999987554332 35788888899999999999999 99999999999999995 34578999999999876
Q ss_pred CCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 680 EDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 680 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
......+.+||++|||||+++..+|+..+|||+.||++|-++.|++||++.... .-+.++....+
T Consensus 165 --~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-rlye~I~~g~y------------ 229 (355)
T KOG0033|consen 165 --DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYEQIKAGAY------------ 229 (355)
T ss_pred --CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-HHHHHHhcccc------------
Confidence 223445678999999999999999999999999999999999999999873211 11222222111
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
..........+++..+|+++|+..||.+|.|+.|+++|=+
T Consensus 230 ----d~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW 269 (355)
T KOG0033|consen 230 ----DYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPW 269 (355)
T ss_pred ----CCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence 1111223355677899999999999999999999987643
No 49
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-40 Score=339.29 Aligned_cols=256 Identities=28% Similarity=0.447 Sum_probs=219.9
Q ss_pred hccCCCCceeeeccceEEEEEEECC-CcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
..+..+.++||-|.||.||.|.|+. .-.||||.++.+ ....++|..|+.+|+.++|||+|+++|+|..+..+|||+||
T Consensus 266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEf 344 (1157)
T KOG4278|consen 266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEF 344 (1157)
T ss_pred chheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEec
Confidence 3455667899999999999999986 567999998744 56688999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|..|+|.+|+++.. ..++.--.+.++.||++|++||. .+.+||||+.++|.|+.++..+|++|||+++.+.... +
T Consensus 345 M~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT-Y 420 (1157)
T KOG4278|consen 345 MCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT-Y 420 (1157)
T ss_pred ccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc-e
Confidence 99999999998766 34566667889999999999999 9999999999999999999999999999999987543 3
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
....+...++.|.|||-+....++.|+|||+|||++||+.| |..||.+. ++.+.+ .+-+
T Consensus 421 TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----dlSqVY---------------~LLE 480 (1157)
T KOG4278|consen 421 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVY---------------GLLE 480 (1157)
T ss_pred ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----cHHHHH---------------HHHh
Confidence 34455567889999999999999999999999999999999 77777652 111111 1223
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
.++++..|+.|++.+++||+.||+.+|.+||+++|+-+.++.+.
T Consensus 481 kgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 481 KGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred ccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 45667788899999999999999999999999999999999875
No 50
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-39 Score=342.75 Aligned_cols=242 Identities=24% Similarity=0.314 Sum_probs=202.5
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 600 (824)
.++|...++||+|.||+|+.|..+ +++.+|||++++.. +.+.+..+.|..++... +||++++++++|+..++.|+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 467899999999999999999876 48899999998763 55677888899988877 59999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
||||+.||++..+.+ ...+++..+.-+++.|+.||.||| +++|||||||.+|||+|.+|++||+|||+++.-.
T Consensus 447 vmey~~Ggdm~~~~~--~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m-- 519 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIH--TDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM-- 519 (694)
T ss_pred EEEecCCCcEEEEEe--cccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccC--
Confidence 999999999544433 246899999999999999999999 9999999999999999999999999999998543
Q ss_pred CCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
......+...||+.|||||++.+..|+.++|.|||||++|||+.|..||.+..+. +++|..+.
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe-----------------e~FdsI~~ 582 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE-----------------EVFDSIVN 582 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH-----------------HHHHHHhc
Confidence 2223445678999999999999999999999999999999999999999862221 22222222
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCH
Q 040845 761 SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINA 795 (824)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~ 795 (824)
... ..|..++.+..+||+++++.+|++|..+
T Consensus 583 d~~----~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 583 DEV----RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCC----CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 211 1233567788999999999999999965
No 51
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=8.2e-39 Score=348.83 Aligned_cols=259 Identities=24% Similarity=0.405 Sum_probs=205.4
Q ss_pred hccCCCCceeeeccceEEEEEEEC------CCcEEEEEEeeccc-cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR------DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEF 597 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 597 (824)
.++|++.+.||+|+||.||+|++. ++..||||+++... ....+.+.+|+++++.+ +|+||+++++++.....
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 357889999999999999999742 24579999986543 23346688899999999 89999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhhCC-----------------------------------------------------------
Q 040845 598 KALVLEYMPHGSLEKYLHSSN----------------------------------------------------------- 618 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------- 618 (824)
.++||||+++|+|.+++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 999999999999999985421
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccccc
Q 040845 619 ----------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQ 688 (824)
Q Consensus 619 ----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 688 (824)
..+++.++++++.|++.|++||| +.+|+||||||+||++++++.+||+|||+++.............
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 24678889999999999999999 99999999999999999999999999999986543322222222
Q ss_pred ccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 689 TLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 689 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
..++..|+|||++.+..++.++|||||||++|||++ |+.||....... .......... ..
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~------------------~~ 334 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGY------------------QM 334 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHccc------------------Cc
Confidence 335678999999988899999999999999999997 999987643221 1111111000 00
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
..+...+.++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 335 SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 011123567899999999999999999999999998863
No 52
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.6e-38 Score=333.89 Aligned_cols=269 Identities=20% Similarity=0.239 Sum_probs=203.7
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
++|++.+.||+|+||.||+|+++ +++.||+|+++... ....+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46889999999999999999876 58899999987542 2334667889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|++++.+..+.. ....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 155 (287)
T cd07848 81 YVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN- 155 (287)
T ss_pred cCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc-
Confidence 998876665543 3447899999999999999999999 99999999999999999999999999999987643221
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhC--CCcch---------
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCL--PISTM--------- 752 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~--------- 752 (824)
.......++..|+|||++.+..++.++||||+||++|||++|+.||......+. ......... +....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ-LFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhCCCCHHHHHhhhccchh
Confidence 122334689999999999888899999999999999999999999975322111 111100000 00000
Q ss_pred -hhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 -EVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 -~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+...............++..+.+++.+||+.||++|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000001111112356789999999999999999999999864
No 53
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.9e-38 Score=333.27 Aligned_cols=267 Identities=22% Similarity=0.288 Sum_probs=203.3
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
.++|++.+.||+|+||+||+|+.+ +++.||+|+++... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 357899999999999999999865 58999999986543 2234567789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|+++ +|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-- 157 (288)
T cd07871 84 YLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-- 157 (288)
T ss_pred CCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC--
Confidence 9974 999998776656889999999999999999999 9999999999999999999999999999997543222
Q ss_pred cccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhC-CCc-----------
Q 040845 684 MTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCL-PIS----------- 750 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~----------- 750 (824)
.......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+ .......... +..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhccccchh
Confidence 12233467899999998865 468999999999999999999999997532211 1111111100 000
Q ss_pred chhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 751 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
......+...... ........+.++.+++.+|++.||.+|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~--~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 237 FRSYLFPQYRAQP--LINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhccccCccCCCc--hHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000000000 001112345678999999999999999999999864
No 54
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.4e-38 Score=331.82 Aligned_cols=255 Identities=22% Similarity=0.390 Sum_probs=206.3
Q ss_pred ccCCCCceeeeccceEEEEEEEC----CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR----DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
.+|++.+.||+|+||.||+|.++ .+..||+|.++.... .....+.+|+.+++.++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 56888999999999999999753 357899999876532 3345788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||+++|+|.+++......+++.+++.++.|++.|++||| +.+++||||||+||+++.++.++++|||.+.......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 9999999999999876557899999999999999999999 9999999999999999999999999999876532211
Q ss_pred CccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 682 QSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
. .......++..|+|||.+.+..++.++|||||||++||+++ |..||...... .....+...
T Consensus 162 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~-------------- 224 (266)
T cd05064 162 I-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAVEDG-------------- 224 (266)
T ss_pred h-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCC--------------
Confidence 1 11112335678999999998999999999999999999875 99998753211 111111000
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 761 SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
.....+..++..+.+++.+||+.+|++||++.|+.+.|.++
T Consensus 225 ----~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 225 ----FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ----CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 01112335677899999999999999999999999998764
No 55
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5.4e-39 Score=339.22 Aligned_cols=246 Identities=25% Similarity=0.331 Sum_probs=202.5
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46888999999999999999865 58999999986532 223456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++|+|.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~- 155 (291)
T cd05612 81 EYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT- 155 (291)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc-
Confidence 9999999999998765 6889999999999999999999 9999999999999999999999999999998653221
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
....|++.|+|||++.+..++.++||||+||++|||++|+.||...... ......... .
T Consensus 156 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-----~~~~~i~~~--------~---- 214 (291)
T cd05612 156 ----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-----GIYEKILAG--------K---- 214 (291)
T ss_pred ----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhC--------C----
Confidence 2245899999999999888999999999999999999999998753211 111100000 0
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRIN-----AKEIVAKL 802 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~L 802 (824)
...+..++..+.+++.+||+.||.+||+ ++|++++-
T Consensus 215 ----~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 215 ----LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred ----cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence 0011123556889999999999999995 88888773
No 56
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=5.6e-39 Score=332.92 Aligned_cols=249 Identities=35% Similarity=0.581 Sum_probs=196.9
Q ss_pred CCceeeeccceEEEEEEEC-----CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 531 ENNLIGRGGFGSVYKARIR-----DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 531 ~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
..+.||.|.||.||+|.+. .+..|+||.++.... ...+.+.+|++.+++++||||++++|++...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3578999999999999876 267899999965433 3467899999999999999999999999988889999999
Q ss_pred cCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSS-NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
+++|+|.+++... ...+++.++..++.|+++|++||| +.+++|+||+++||++++++.+||+|||++.........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999987 567999999999999999999999 899999999999999999999999999999876333333
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
...........|+|||.+....++.++||||||+++||+++ |+.||...... .....+.
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~--~~~~~~~------------------ 219 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE--EIIEKLK------------------ 219 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH--HHHHHHH------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccc------------------
Confidence 33334457789999999988889999999999999999999 67887653111 1111110
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
...+...+..++..+.+++.+||..||++|||++++++.|
T Consensus 220 ~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 220 QGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 0011122334677799999999999999999999999876
No 57
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.7e-38 Score=334.35 Aligned_cols=270 Identities=22% Similarity=0.305 Sum_probs=203.5
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
.++|++.+.||+|+||.||+|+.+ +++.||||+++.... .....+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 478999999999999999999875 589999999865432 223456789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|++ ++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 157 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-- 157 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC--
Confidence 995 6888888776667889999999999999999999 9999999999999999999999999999987543221
Q ss_pred cccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCc--------chhh
Q 040845 684 MTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIS--------TMEV 754 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 754 (824)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.+.......+........... ....
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH 237 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccc
Confidence 12234568899999998765 45789999999999999999999999764322222211111100000 0000
Q ss_pred cccccc---Cchh-hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 755 VDANLL---SQED-IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 755 ~~~~~~---~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.++... .... .........+..+.+++.+|++.||++|||+.|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 238 FKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 000000 0000 0001111234568899999999999999999999864
No 58
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-39 Score=320.93 Aligned_cols=263 Identities=25% Similarity=0.353 Sum_probs=199.7
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCC-----eeE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEE-----FKA 599 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 599 (824)
.-.|...+++|.|+||.||+|... +++.||||+.-.+ .+--.+|.++|+.++|||||++..+|.... ...
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d----~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQD----KRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCC----CCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 345777899999999999999865 4799999987433 222346999999999999999999885422 345
Q ss_pred EEEeccCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC-CcEEEeeccccc
Q 040845 600 LVLEYMPHGSLEKYLHSS---NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFGIAK 675 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~Dfg~a~ 675 (824)
+|||||+. +|.++++.. +..++...+.-+.+|+.+|++||| +.+|+||||||.|+|+|.+ |.+||||||.|+
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 89999966 999998753 356788888999999999999999 9999999999999999965 999999999999
Q ss_pred ccCCCCCccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCc--ch
Q 040845 676 LLTGEDQSMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIS--TM 752 (824)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~ 752 (824)
.+..+... ..+..|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.+. .+...+..+++...... ..
T Consensus 175 ~L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~-s~~dQL~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 175 VLVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD-SSVDQLVEIIKVLGTPTREDI 250 (364)
T ss_pred eeccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC-CHHHHHHHHHHHhCCCCHHHH
Confidence 88655443 446689999999988765 6899999999999999999999987662 22223333333222111 11
Q ss_pred hhcccc--------ccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 EVVDAN--------LLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 ~~~~~~--------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
..+.+. .......+ ......+++..+++.++++++|.+|.++.|++.+
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~-~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHK-VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred hhcCcccccccCccccccccee-ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 111111 11111001 1223567789999999999999999999999865
No 59
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.2e-38 Score=338.98 Aligned_cols=261 Identities=24% Similarity=0.399 Sum_probs=209.6
Q ss_pred ccCCCCceeeeccceEEEEEEECC-Cc----EEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD-GM----EVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~-~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
.+|+..+.||+|+||.||+|++.. +. .||+|+++... ....+.+..|+.+++.++||||+++++++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 468899999999999999998642 33 48999986443 23456788899999999999999999998765 4679
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
|+||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccccCC
Confidence 99999999999999877667889999999999999999999 999999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
..........++..|+|||.+....++.++|||||||++||+++ |+.||++.... ....+....
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~~~------------- 227 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKG------------- 227 (316)
T ss_pred CcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHhCC-------------
Confidence 33222233345678999999998899999999999999999998 99998653211 111111100
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhcc
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSLLR 811 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 811 (824)
.....+..++..+.+++.+||..+|++||++.+++..+.++.+...+
T Consensus 228 -----~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~~ 274 (316)
T cd05108 228 -----ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 274 (316)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCch
Confidence 01111223556789999999999999999999999999988765544
No 60
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.2e-38 Score=341.61 Aligned_cols=242 Identities=24% Similarity=0.297 Sum_probs=197.7
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHG 608 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 608 (824)
+.||+|+||.||+|+.+ +|+.||+|+++... ......+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 58999999987542 233456778999999999999999999999999999999999999
Q ss_pred CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccccc
Q 040845 609 SLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQ 688 (824)
Q Consensus 609 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 688 (824)
+|.+++...+ .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~~ 154 (323)
T cd05571 81 ELFFHLSRER-VFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKT 154 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--Ccccc
Confidence 9999997655 6899999999999999999999 9999999999999999999999999999987532221 12234
Q ss_pred ccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhh
Q 040845 689 TLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFV 768 (824)
Q Consensus 689 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (824)
..||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+. .. ...
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~~~---~~----------------~~~ 213 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELIL---ME----------------EIR 213 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--HHHHHHH---cC----------------CCC
Confidence 56899999999999989999999999999999999999999652111 1111100 00 000
Q ss_pred hHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 769 AKEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 769 ~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
.+...+..+.+++.+||..||++|| ++.|++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 1123456789999999999999999 89998865
No 61
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=9.5e-39 Score=343.12 Aligned_cols=246 Identities=22% Similarity=0.277 Sum_probs=202.2
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
.++|++.+.||+|+||.||+|+++ +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 357889999999999999999875 58999999987542 23345688899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred EcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 99999999999998655 6788899999999999999999 9999999999999999999999999999998653322
Q ss_pred CccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 682 QSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+ ......
T Consensus 173 -----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----~~~-~~i~~~------------ 230 (329)
T PTZ00263 173 -----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF----RIY-EKILAG------------ 230 (329)
T ss_pred -----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH----HHH-HHHhcC------------
Confidence 1245899999999999988999999999999999999999998652111 100 100000
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRIN-----AKEIVAK 801 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~ 801 (824)
....+..++..+.+++.+||+.||++||+ ++|+++|
T Consensus 231 ----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 231 ----RLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred ----CcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 00011123456889999999999999997 6888866
No 62
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.3e-38 Score=344.90 Aligned_cols=259 Identities=24% Similarity=0.417 Sum_probs=207.3
Q ss_pred hccCCCCceeeeccceEEEEEEECC------CcEEEEEEeecccc-chhhhHHHHHHHHhcCC-CCcceeEEeeeecCCe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD------GMEVAVKVFNLQCG-RAFKSFDVECAMMKSIR-HRNLVKVISSCSNEEF 597 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 597 (824)
.++|.+.++||+|+||.||+|++.. +..||||+++.... ...+.+..|+++++++. ||||+++++++.+...
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 4678899999999999999998531 34799999865432 33467889999999996 9999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhhCC-----------------------------------------------------------
Q 040845 598 KALVLEYMPHGSLEKYLHSSN----------------------------------------------------------- 618 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------- 618 (824)
.++||||+++|+|.++++...
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 999999999999999886421
Q ss_pred ------------------------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC
Q 040845 619 ------------------------------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD 662 (824)
Q Consensus 619 ------------------------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 662 (824)
..+++.++..++.|+++|++||| +.+|+||||||+||++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeC
Confidence 23677888999999999999999 999999999999999999
Q ss_pred CCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhh
Q 040845 663 NMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKH 741 (824)
Q Consensus 663 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~ 741 (824)
++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||........ ...
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-~~~ 351 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-FYN 351 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH-HHH
Confidence 99999999999987643333222333456788999999988889999999999999999997 8899875322111 111
Q ss_pred hhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 742 WVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
.+... .....+..++..+.+++.+||+.||++|||+.++.+.|+++.
T Consensus 352 ~~~~~------------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 352 KIKSG------------------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHhcC------------------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 11100 011112345677999999999999999999999999998764
No 63
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-39 Score=325.00 Aligned_cols=260 Identities=27% Similarity=0.362 Sum_probs=203.0
Q ss_pred HHhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--------------chhhhHHHHHHHHhcCCCCccee
Q 040845 523 FQATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--------------RAFKSFDVECAMMKSIRHRNLVK 587 (824)
Q Consensus 523 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~ 587 (824)
....++|++.+.||+|.||.|-+|+.. +++.||||++.+... ...+..++|+.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 445688999999999999999999854 589999999864311 12357889999999999999999
Q ss_pred EEeeeec--CCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCc
Q 040845 588 VISSCSN--EEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV 665 (824)
Q Consensus 588 l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 665 (824)
++.+..+ .+..|+|+|||..|.+...- .....++..++++++.+++.||+||| .++||||||||+|+|++++|+
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p-~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCP-PDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCC-CCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCCc
Confidence 9999876 46889999999988764332 22223889999999999999999999 999999999999999999999
Q ss_pred EEEeecccccccCCCC---CccccccccccccccCccCcCCCC----CCccchHHHHHHHHHHHHhCCCCCcccccCcch
Q 040845 666 AHLSDFGIAKLLTGED---QSMTQTQTLATIGYMAPEYGREGQ----VSTNGDVYSFGIMLMETFTRKKPTDELFNGEMT 738 (824)
Q Consensus 666 ~kl~Dfg~a~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~ 738 (824)
+||+|||.+..+.... ........+||+.|+|||...++. .+.+.||||+||++|.++.|+.||-+.+.-+.
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l- 327 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL- 327 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH-
Confidence 9999999998663221 112223467999999999887643 36788999999999999999999876322111
Q ss_pred hhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 739 LKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
..+++. .. ..++..++....+.+|+++|+.+||++|.+..+|..|..-.
T Consensus 328 ~~KIvn------------~p------L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 328 FDKIVN------------DP------LEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT 376 (576)
T ss_pred HHHHhc------------Cc------ccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence 111111 11 11111223466789999999999999999999999887654
No 64
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.1e-38 Score=332.44 Aligned_cols=250 Identities=21% Similarity=0.290 Sum_probs=201.0
Q ss_pred CCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 529 FSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
|+..+.||+|+||.||+|.. .+|+.||+|.+.... ......+.+|+.+++.++|++|+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67788999999999999986 468999999986542 12234577899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-- 156 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC--
Confidence 99999998876433 46889999999999999999999 9999999999999999999999999999998653222
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
......||..|+|||++.+..++.++||||+||++|||++|+.||........ ...+.... . .
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~-~------------~-- 219 (285)
T cd05631 157 -TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-REEVDRRV-K------------E-- 219 (285)
T ss_pred -eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-HHHHHHHh-h------------c--
Confidence 12344689999999999999999999999999999999999999976322110 01111000 0 0
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRIN-----AKEIVAK 801 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~ 801 (824)
.....+..++..+.+|+.+||+.||++||+ ++|++++
T Consensus 220 -~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 220 -DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred -ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 000011234567899999999999999997 8888875
No 65
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.1e-37 Score=335.46 Aligned_cols=265 Identities=21% Similarity=0.295 Sum_probs=206.2
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
.++|++.+.||+|+||.||+|+.. +|..||+|.+..... ...+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 368999999999999999999865 588999999876532 335678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSA-PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
|+++++|.+++.... .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 158 (331)
T cd06649 84 HMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 158 (331)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc-
Confidence 999999999997655 6889999999999999999999 64 69999999999999999999999999987653221
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCC-------------
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPI------------- 749 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------------- 749 (824)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||......+ +..........
T Consensus 159 ---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T cd06649 159 ---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE--LEAIFGRPVVDGEEGEPHSISPRP 233 (331)
T ss_pred ---cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccccCCccccCccc
Confidence 223468999999999998899999999999999999999999996532111 11111000000
Q ss_pred -cch-----------------hhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 750 -STM-----------------EVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 750 -~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
... +..+.. ..... .......++.++.+++.+||+.||++|||+.|++++-
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 234 RPPGRPVSGHGMDSRPAMAIFELLDYI-VNEPP-PKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred ccccccccccccccccchhHHHHHHHH-HhCCC-cCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 000 000000 00000 0000113567899999999999999999999999875
No 66
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=8e-38 Score=326.27 Aligned_cols=257 Identities=26% Similarity=0.463 Sum_probs=209.5
Q ss_pred hccCCCCceeeeccceEEEEEEECC----CcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD----GMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
.++|++.+.||+|+||+||+|.++. ...||||.++... ......+..|+.+++.++||||+++++++.+.+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 3578899999999999999998753 4579999886543 2334678889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
||||+++++|.+++......+++.++..++.|++.|++||| +.+|+||||||+||++++++.++++|||++......
T Consensus 83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999999876667899999999999999999999 999999999999999999999999999999877532
Q ss_pred CCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
..........++..|+|||.+.+..++.++||||||+++||+++ |..||...... .....+....
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~------------ 225 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVEDGY------------ 225 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCC------------
Confidence 22222223345678999999998899999999999999999998 99998653211 1111111100
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
....+..++..+.+++.+||+.+|++||++.|++++|+++
T Consensus 226 ------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 226 ------RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0011224566789999999999999999999999999875
No 67
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=5.7e-38 Score=325.36 Aligned_cols=251 Identities=25% Similarity=0.408 Sum_probs=203.9
Q ss_pred ccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccC
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMP 606 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 606 (824)
++|++.+.||+|+||.||+|+++++..+|+|.+... ....+.+..|++++++++||||+++++++.+....++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 468888999999999999999988889999987633 2334678889999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 040845 607 HGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQ 686 (824)
Q Consensus 607 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 686 (824)
+|+|.++++.....+++..+..++.|++.|++||| +.+++||||||+||++++++.+|++|||.+......... ..
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~-~~ 158 (256)
T cd05114 83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT-SS 158 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee-cc
Confidence 99999999765556899999999999999999999 999999999999999999999999999998865432221 12
Q ss_pred ccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 687 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
....++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+.....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--~~~~~i~~~~~----------------- 219 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--EVVEMISRGFR----------------- 219 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCCC-----------------
Confidence 23345678999999988889999999999999999999 88888653211 11111111000
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
...+...+..+.+++.+||+.+|++||+++|+++.|
T Consensus 220 -~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 220 -LYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 000112245689999999999999999999999876
No 68
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=5.7e-38 Score=330.65 Aligned_cols=255 Identities=29% Similarity=0.524 Sum_probs=207.8
Q ss_pred ccCCCCceeeeccceEEEEEEECC------CcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD------GMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKA 599 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 599 (824)
++|++.+.||+|+||.||+|.... ...||+|.+..... .....+.+|+.+++.++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 468889999999999999998643 25799998864432 33456889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC
Q 040845 600 LVLEYMPHGSLEKYLHSSN---------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM 664 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 664 (824)
++|||+++++|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCC
Confidence 9999999999999997542 35788899999999999999999 99999999999999999999
Q ss_pred cEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhh
Q 040845 665 VAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWV 743 (824)
Q Consensus 665 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 743 (824)
.++|+|||++................+++.|+|||.+.++.++.++|||||||++|||++ |..||......+ ....+
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~--~~~~i 239 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE--VIEMI 239 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH
Confidence 999999999986543333333334456889999999988899999999999999999998 999987632211 11111
Q ss_pred hhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 744 NDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
... . ....+..++.++.+++.+||+.||.+||+++|++++|++
T Consensus 240 ~~~------------~------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 240 RSR------------Q------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HcC------------C------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 110 0 011234567889999999999999999999999999975
No 69
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.5e-38 Score=339.04 Aligned_cols=253 Identities=23% Similarity=0.324 Sum_probs=204.8
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||.||+|++. +++.||||+++... ......+..|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999876 48999999997542 233456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++|+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---
Confidence 9999999999997655 6889999999999999999999 99999999999999999999999999999976532
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ........ . ..........
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~-~-----~~~~~~~~~~ 224 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE-TWENLKYW-K-----ETLQRPVYDD 224 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH-HHHHHHhc-c-----ccccCCCCCc
Confidence 2233568999999999998899999999999999999999999997532211 11110000 0 0000000000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....++.++.+++.+||..+|++||+++|++++
T Consensus 225 ------~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 225 ------PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ------cccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 002346678999999999999999999999987
No 70
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.8e-39 Score=333.55 Aligned_cols=251 Identities=25% Similarity=0.340 Sum_probs=213.1
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCe-eEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEF-KALV 601 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv 601 (824)
.++|...+.+|+|+||.++.++++ +++.||+|.+.... ....+....|+.++++++|||||.+.+.|.+++. .+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 467899999999999999999765 47899999987653 3345577889999999999999999999999888 9999
Q ss_pred EeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 602 LEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
|+|++||++.+.+.+.+ ..++++++..|+.|++.|+.||| +.+|+|||||+.||+++.++.|||+|||+|+.+...
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 99999999999998766 67899999999999999999999 999999999999999999999999999999987644
Q ss_pred CCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
. ......+||+.||+||.+.+..|..|+||||+||++|||++-+++|....-... ..+..+..
T Consensus 160 ~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L-i~ki~~~~-------------- 222 (426)
T KOG0589|consen 160 D--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL-ILKINRGL-------------- 222 (426)
T ss_pred h--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH-HHHHhhcc--------------
Confidence 3 234557899999999999999999999999999999999999999976321111 11111110
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 761 SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
-.+.+..++.++..++..|+..+|+.||++.+++.+
T Consensus 223 -----~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 -----YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -----CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 112334567889999999999999999999999987
No 71
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1e-37 Score=329.34 Aligned_cols=259 Identities=30% Similarity=0.491 Sum_probs=209.6
Q ss_pred ccCCCCceeeeccceEEEEEEEC------CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR------DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
.+|.+.+.||+|+||.||++... ++..||+|.+........+.+..|++++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 56888999999999999999742 245689998875554556778999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCC------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 040845 601 VLEYMPHGSLEKYLHSSN------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 668 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 668 (824)
||||+++++|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.+++
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEe
Confidence 999999999999997433 24899999999999999999999 999999999999999999999999
Q ss_pred eecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhC
Q 040845 669 SDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCL 747 (824)
Q Consensus 669 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 747 (824)
+|||++................++..|+|||.+.+..++.++|||||||++|||++ |..||......+ ..........
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-~~~~i~~~~~ 240 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-VIECITQGRV 240 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCc
Confidence 99999986543332222233446778999999998889999999999999999999 888886532211 1111111000
Q ss_pred CCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 040845 748 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDS 808 (824)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 808 (824)
. ..+..++.++.+++.+||+.||.+|||++|+.+.|+++..+
T Consensus 241 ------------~-------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 241 ------------L-------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred ------------C-------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 0 00113456789999999999999999999999999998754
No 72
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=5e-38 Score=336.57 Aligned_cols=242 Identities=23% Similarity=0.300 Sum_probs=197.3
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHG 608 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 608 (824)
+.||+|+||.||+|+.+ +|+.||+|+++... ......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999864 58999999987542 233456678999999999999999999999999999999999999
Q ss_pred CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccccc
Q 040845 609 SLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQ 688 (824)
Q Consensus 609 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 688 (824)
+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... .....
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~~~ 154 (323)
T cd05595 81 ELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKT 154 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC--Ccccc
Confidence 9999887655 6899999999999999999999 9999999999999999999999999999987532221 12233
Q ss_pred ccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhh
Q 040845 689 TLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFV 768 (824)
Q Consensus 689 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (824)
..||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......... ..
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-~~~~~~~~~--------------------~~ 213 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-LFELILMEE--------------------IR 213 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHhcCC--------------------CC
Confidence 568999999999998899999999999999999999999986532111 111110000 00
Q ss_pred hHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 769 AKEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 769 ~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
.+..++..+.+++.+||+.||++|| ++.+++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 1123456789999999999999998 89998875
No 73
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-38 Score=301.51 Aligned_cols=255 Identities=26% Similarity=0.379 Sum_probs=209.4
Q ss_pred HHhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--------chhhhHHHHHHHHhcC-CCCcceeEEeee
Q 040845 523 FQATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--------RAFKSFDVECAMMKSI-RHRNLVKVISSC 592 (824)
Q Consensus 523 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 592 (824)
...-.+|+..+.+|.|..++|.++.++ +|..+|+|++..... +..++-.+|+.+++++ .||+|+++.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 344567888899999999999999654 688999999865432 1234556799999999 699999999999
Q ss_pred ecCCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecc
Q 040845 593 SNEEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 672 (824)
Q Consensus 593 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 672 (824)
+.+...++|+|.|+.|.|.|++...- .+++.+..++++|+.+|++||| ...|||||+||+|||+|++.++||+|||
T Consensus 93 es~sF~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccc
Confidence 99999999999999999999998765 7899999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccCccCcC------CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhh
Q 040845 673 IAKLLTGEDQSMTQTQTLATIGYMAPEYGR------EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDC 746 (824)
Q Consensus 673 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 746 (824)
+|+.+.++. .....+||++|.|||.+. ...|+..+|+||.||++|-++.|.+||+... .+-+...+.
T Consensus 169 Fa~~l~~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk--QmlMLR~Im-- 241 (411)
T KOG0599|consen 169 FACQLEPGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK--QMLMLRMIM-- 241 (411)
T ss_pred eeeccCCch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH--HHHHHHHHH--
Confidence 999875443 345678999999999774 3458889999999999999999999997622 111111111
Q ss_pred CCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 747 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.+....+.+.+.+.+....+|+.+|+++||++|.|++|+++|
T Consensus 242 -------------eGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 242 -------------EGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred -------------hcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 111112223445677889999999999999999999999986
No 74
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.9e-38 Score=339.79 Aligned_cols=246 Identities=22% Similarity=0.268 Sum_probs=201.5
Q ss_pred hccCCCCceeeeccceEEEEEEECC--CcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD--GMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
.++|++.+.||+|+||.||+|.++. +..||+|++.... ....+.+.+|+.+++.++||||+++++++.+....++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3578899999999999999998643 3689999986532 2334567889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 109 v~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 999999999999998665 6889999999999999999999 999999999999999999999999999999865321
Q ss_pred CCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ......... ..
T Consensus 185 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-~~~~~i~~~------------~~- 245 (340)
T PTZ00426 185 -----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-LIYQKILEG------------II- 245 (340)
T ss_pred -----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-HHHHHHhcC------------CC-
Confidence 12346899999999998888999999999999999999999999753211 001111000 00
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 761 SQEDIHFVAKEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
..+...+..+.+++.+|++.||++|+ +++|++++
T Consensus 246 -------~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 -------YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -------CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 01122345678999999999999995 89998876
No 75
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.4e-37 Score=326.61 Aligned_cols=261 Identities=24% Similarity=0.392 Sum_probs=207.2
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCc----EEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGM----EVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
++|++.+.||+|+||+||+|.+. +++ .||+|.+..... .....+..|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 56888899999999999999864 344 477777653322 234567778889999999999999998864 45678
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
++||+++|+|.+++......+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||.++.....
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 99999999999999876667899999999999999999999 999999999999999999999999999999876443
Q ss_pred CCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
..........++..|+|||.+.++.++.++||||||+++||+++ |..||.+.... ...+++.....
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~~----------- 229 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLEKGER----------- 229 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCCc-----------
Confidence 33333334557788999999988899999999999999999998 99998653221 11222111000
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhcc
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSLLR 811 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 811 (824)
...+..|+..+.+++.+||..||++|||+.|+++.|..+.+..++
T Consensus 230 -------~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~~ 274 (279)
T cd05111 230 -------LAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPPR 274 (279)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCcc
Confidence 001122455678899999999999999999999999988765444
No 76
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.2e-37 Score=335.01 Aligned_cols=260 Identities=27% Similarity=0.446 Sum_probs=205.6
Q ss_pred hccCCCCceeeeccceEEEEEEEC------CCcEEEEEEeecccc-chhhhHHHHHHHHhcC-CCCcceeEEeeeec-CC
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR------DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSI-RHRNLVKVISSCSN-EE 596 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 596 (824)
.++|++.+.||+|+||.||+|... +++.||+|+++.... ...+.+..|+.+++++ +|+||++++++|.. +.
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 357899999999999999999642 247899999864322 2345677899999999 89999999998865 45
Q ss_pred eeEEEEeccCCCCHHHHhhhCC----------------------------------------------------------
Q 040845 597 FKALVLEYMPHGSLEKYLHSSN---------------------------------------------------------- 618 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 618 (824)
..+++|||+++++|.+++....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 7789999999999999986421
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccccccccccccc
Q 040845 619 --YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYM 696 (824)
Q Consensus 619 --~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~ 696 (824)
..+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++..+.............++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 25789999999999999999999 9999999999999999999999999999998764433333333345677899
Q ss_pred CccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHH
Q 040845 697 APEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVS 775 (824)
Q Consensus 697 aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (824)
|||++.+..++.++||||+||++|||++ |..||......+ .......... ....+..++.
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~------------------~~~~~~~~~~ 303 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLKEGT------------------RMRAPEYATP 303 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHhccC------------------CCCCCccCCH
Confidence 9999999999999999999999999998 999986532211 1111111000 0001123456
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 040845 776 FVFNLALECTVESPEQRINAKEIVAKLLKIRD 807 (824)
Q Consensus 776 ~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 807 (824)
++.+++.+||+.+|++||++.|++++|+++.+
T Consensus 304 ~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 304 EIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 78999999999999999999999999998765
No 77
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=5.3e-38 Score=326.71 Aligned_cols=256 Identities=28% Similarity=0.490 Sum_probs=211.6
Q ss_pred hhccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
...+|++.+.||+|+||.||+|.+.++..||+|++..........+..|+.+++.++|+||+++++++.+....++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 35678899999999999999999888999999998766554567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
+++++|.+++.... ..+++.++..++.|++.|++||| +.+++|+||+|+||++++++.+||+|||.+.........
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 99999999997643 46899999999999999999999 999999999999999999999999999999866432211
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
.....++..|+|||......++.++||||||+++|+|++ |+.||......+ ....+...
T Consensus 161 --~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~--~~~~~~~~---------------- 220 (261)
T cd05148 161 --SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE--VYDQITAG---------------- 220 (261)
T ss_pred --ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH--HHHHHHhC----------------
Confidence 123346778999999988889999999999999999998 888886532111 11111100
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
.+...+..++..+.+++.+||+.||++|||++++++.|+.+
T Consensus 221 --~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 221 --YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred --CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 01111234567789999999999999999999999999763
No 78
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=8.4e-38 Score=335.40 Aligned_cols=242 Identities=24% Similarity=0.309 Sum_probs=197.7
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHG 608 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 608 (824)
+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+.+++.++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 58999999987542 233456788999999999999999999999999999999999999
Q ss_pred CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccccc
Q 040845 609 SLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQ 688 (824)
Q Consensus 609 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 688 (824)
+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... .....
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~ 154 (328)
T cd05593 81 ELFFHLSRER-VFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--ATMKT 154 (328)
T ss_pred CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--ccccc
Confidence 9999987654 6899999999999999999999 9999999999999999999999999999987532211 12233
Q ss_pred ccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhh
Q 040845 689 TLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFV 768 (824)
Q Consensus 689 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (824)
..||+.|+|||.+.+..++.++||||+||++|||++|+.||...... ......... ...
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-----~~~~~~~~~----------------~~~ 213 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILME----------------DIK 213 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-----HHHHHhccC----------------Ccc
Confidence 56899999999999889999999999999999999999999652111 111110000 000
Q ss_pred hHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 769 AKEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 769 ~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
.+..++..+.+++.+||..||++|| ++.|++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 214 FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 1123456788999999999999997 89999876
No 79
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=8.9e-38 Score=328.65 Aligned_cols=255 Identities=32% Similarity=0.508 Sum_probs=206.6
Q ss_pred hccCCCCceeeeccceEEEEEEECC------CcEEEEEEeeccccc-hhhhHHHHHHHHhcCCCCcceeEEeeeecCCee
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD------GMEVAVKVFNLQCGR-AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFK 598 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 598 (824)
.++|.+.+.||+|+||.||+|++.+ ++.||||.++..... ..+.+.+|+++++.++|+||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 3568888999999999999998643 478999998755433 457889999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhhCC-------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCc
Q 040845 599 ALVLEYMPHGSLEKYLHSSN-------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV 665 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 665 (824)
++||||+++++|.+++...+ ..+++.++..++.|++.|++||| +.+++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCe
Confidence 99999999999999997542 34788899999999999999999 999999999999999999999
Q ss_pred EEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhh
Q 040845 666 AHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVN 744 (824)
Q Consensus 666 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 744 (824)
+||+|||.+................++..|+|||++.++.++.++||||+||++|||++ |..||...... .....+.
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--~~~~~~~ 238 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--EVIECIT 238 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHH
Confidence 99999999976543332222233446788999999999999999999999999999999 99998653221 1111111
Q ss_pred hhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 745 DCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
.. .. ...+..++..+.+++.+||..||++||++.|+++.|+
T Consensus 239 ~~------------~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 239 QG------------RL------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred cC------------Cc------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 00 00 0011234667899999999999999999999999886
No 80
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.3e-38 Score=335.04 Aligned_cols=240 Identities=25% Similarity=0.290 Sum_probs=195.1
Q ss_pred eeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCH
Q 040845 535 IGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSL 610 (824)
Q Consensus 535 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 610 (824)
||+|+||.||+|+.. +++.||+|+++... ......+..|+.++++++||||+++++++.+++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999865 48899999987532 23345677899999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccccccc
Q 040845 611 EKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTL 690 (824)
Q Consensus 611 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 690 (824)
.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++....... .......
T Consensus 81 ~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~ 154 (312)
T cd05585 81 FHHLQREG-RFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNTFC 154 (312)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Ccccccc
Confidence 99997654 6899999999999999999999 9999999999999999999999999999987543222 1223456
Q ss_pred ccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhH
Q 040845 691 ATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAK 770 (824)
Q Consensus 691 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 (824)
||+.|+|||.+.+..++.++||||+||++|||++|+.||..... ........... ...+
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----~~~~~~~~~~~----------------~~~~ 213 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----NEMYRKILQEP----------------LRFP 213 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----HHHHHHHHcCC----------------CCCC
Confidence 89999999999998999999999999999999999999975211 11111111100 0111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 040845 771 EQCVSFVFNLALECTVESPEQRIN---AKEIVAK 801 (824)
Q Consensus 771 ~~~~~~l~~l~~~cl~~dP~~Rpt---~~evl~~ 801 (824)
..++..+.+++.+||..||++||+ +.|++++
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 234567889999999999999985 6776654
No 81
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-38 Score=338.22 Aligned_cols=260 Identities=27% Similarity=0.437 Sum_probs=224.5
Q ss_pred CCCceeeeccceEEEEEEE-CCC----cEEEEEEeecc-ccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 530 SENNLIGRGGFGSVYKARI-RDG----MEVAVKVFNLQ-CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 530 ~~~~~lg~G~~g~V~~~~~-~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
...++||+|+||+||+|.| ..| -+||+|++... ..+...++.+|+..|.+++|||+++++|+|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 4467999999999999986 333 46899988654 3445678999999999999999999999998776 779999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|++.|+|.++++.++..+.....+.|..|||+|+.||| .+++|||||.++|||+.+-..+||.|||+|+.....+..
T Consensus 778 ~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred hcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 99999999999999888999999999999999999999 999999999999999999999999999999998877766
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
+......-++.|||-|.+....|+.++|||||||.+||++| |..|+++....+. . | .-+
T Consensus 855 y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI--~---------------d---lle 914 (1177)
T KOG1025|consen 855 YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI--P---------------D---LLE 914 (1177)
T ss_pred ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh--h---------------H---HHh
Confidence 66666667889999999999999999999999999999999 9999887433221 1 1 112
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhcccc
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSLLRNV 813 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~ 813 (824)
.+.++.+|+.|+.+++.+|.+||..|+..||+|+++..++.++.....|..
T Consensus 915 ~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqryl 965 (1177)
T KOG1025|consen 915 KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQRYL 965 (1177)
T ss_pred ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcceEe
Confidence 334578889999999999999999999999999999999999876655543
No 82
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.4e-37 Score=323.51 Aligned_cols=255 Identities=25% Similarity=0.422 Sum_probs=208.0
Q ss_pred hccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.++|++.+.||+|+||.||+|...++..||+|.+... ....+.+.+|+.+++.++|+||+++++++.+....++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 4678899999999999999999888889999987643 234567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 606 PHGSLEKYLHSS-NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 606 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
++++|.+++... ...+++.++..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.+........ .
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~ 159 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-T 159 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCce-e
Confidence 999999999754 356888999999999999999999 99999999999999999999999999999987543221 1
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
......++..|+|||+...+.++.++|||||||++|||+| |+.||...... .....+....+
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~--------------- 222 (261)
T cd05072 160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSALQRGYR--------------- 222 (261)
T ss_pred ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCCC---------------
Confidence 1223345678999999988889999999999999999998 89998653211 11111111000
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
......++.++.+++.+||..+|++||+++++.+.|+++
T Consensus 223 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 223 ---MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ---CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 001123456789999999999999999999999999763
No 83
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.6e-37 Score=336.11 Aligned_cols=267 Identities=22% Similarity=0.325 Sum_probs=198.4
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecC-----CeeE
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNE-----EFKA 599 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 599 (824)
+|++.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+++++.++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5788899999999999999865 58999999986432 22345678899999999999999999987543 3579
Q ss_pred EEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 600 LVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
+||||++ ++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 81 VVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred EEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 9999995 68999987655 6899999999999999999999 99999999999999999999999999999986532
Q ss_pred CCC-ccccccccccccccCccCcCC--CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcc
Q 040845 680 EDQ-SMTQTQTLATIGYMAPEYGRE--GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVD 756 (824)
Q Consensus 680 ~~~-~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (824)
... ........+|..|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+.........+...
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHH
Confidence 221 122234568999999998865 5789999999999999999999999865321 11111111111000000000
Q ss_pred c-----------cccCchhhhh-hhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 757 A-----------NLLSQEDIHF-VAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 757 ~-----------~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
. .......... .....++..+.+++.+||..||++|||++|++++
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 0000000000 0001345678899999999999999999999976
No 84
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.3e-37 Score=322.55 Aligned_cols=252 Identities=25% Similarity=0.414 Sum_probs=204.4
Q ss_pred ccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccC
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMP 606 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 606 (824)
++|.+.+.||+|+||.||.|+++++..||+|.+... ....+.+.+|+.++++++||||+++++++.+....++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 467888999999999999999887778999988643 2334678899999999999999999999998888999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 040845 607 HGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQ 686 (824)
Q Consensus 607 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 686 (824)
+|+|.+++......+++.+++.++.|++.|++||| +.+++|+||||+||+++.++.+||+|||.+........ ...
T Consensus 83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~~~ 158 (256)
T cd05113 83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-TSS 158 (256)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCce-eec
Confidence 99999999875557899999999999999999999 99999999999999999999999999999886543221 122
Q ss_pred ccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 687 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
....++..|+|||...+..++.++||||||+++|||++ |..||......+ ....+.....
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~~~~~~----------------- 219 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--TVEKVSQGLR----------------- 219 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHhcCCC-----------------
Confidence 22345678999999988889999999999999999999 888986532111 1111100000
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
...+...+..+.+++.+||+.+|++||++.++++.++
T Consensus 220 -~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 220 -LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0001123567899999999999999999999998763
No 85
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-38 Score=344.06 Aligned_cols=257 Identities=24% Similarity=0.340 Sum_probs=209.1
Q ss_pred ccCCCCceeeeccceEEEEEEECCC-cEEEEEEeeccccchhhhHHHHHHHHhcCC-CCcceeEEee-eec------CCe
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRDG-MEVAVKVFNLQCGRAFKSFDVECAMMKSIR-HRNLVKVISS-CSN------EEF 597 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~------~~~ 597 (824)
.++++.+.|.+|||+.||.|+...+ ..||+|++-.......+.+.+|+++|+.|+ |+|||.+++. ... ...
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 4567889999999999999987665 999999987777778889999999999996 9999999993 211 246
Q ss_pred eEEEEeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 040845 598 KALVLEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 676 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 676 (824)
+++.||||.+|.|-|++.... ..+++.++++|+.|+++|+++|| .++.+|||||||-+|||++.+|..||||||.|+.
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH-~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMH-YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHh-cCCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 779999999999999997432 46999999999999999999999 4467799999999999999999999999999876
Q ss_pred cCCCCCccc-------cccccccccccCccCc---CCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhh
Q 040845 677 LTGEDQSMT-------QTQTLATIGYMAPEYG---REGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDC 746 (824)
Q Consensus 677 ~~~~~~~~~-------~~~~~~~~~y~aPE~~---~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 746 (824)
......... .-....|+.|+|||.+ .+...++|+|||++||+||-|+....||++...- .+.
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--aIl------ 267 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--AIL------ 267 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--eEE------
Confidence 533321111 1123479999999965 5667899999999999999999999999873211 111
Q ss_pred CCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 040845 747 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRD 807 (824)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 807 (824)
+ ..+.++....++..+.+||+.||++||++||++-||+.++.++..
T Consensus 268 ---------n------g~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 268 ---------N------GNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred ---------e------ccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 1 111222224678889999999999999999999999999999875
No 86
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.7e-37 Score=326.57 Aligned_cols=260 Identities=31% Similarity=0.480 Sum_probs=209.8
Q ss_pred ccCCCCceeeeccceEEEEEEEC------CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR------DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
.+|.+.+.||+|+||.||+|++. ++..||+|.+........+.+.+|++++++++|+||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45778899999999999999743 345689998865544455678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCc
Q 040845 601 VLEYMPHGSLEKYLHSSN---------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV 665 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 665 (824)
||||+++++|.+++.... ..+++..++.++.|++.|++||| +++|+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCc
Confidence 999999999999997532 24789999999999999999999 999999999999999999999
Q ss_pred EEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhh
Q 040845 666 AHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVN 744 (824)
Q Consensus 666 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 744 (824)
++|+|||++................++..|+|||.+.+..++.++||||||+++|||+| |+.||......+ ......
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~~ 239 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--VIECIT 239 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHh
Confidence 99999999976543332222334456788999999998899999999999999999999 999986532211 111100
Q ss_pred hhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 040845 745 DCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSL 809 (824)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 809 (824)
... .. ..+..++..+.+++.+||..+|++|||+.++++.|+++....
T Consensus 240 ---~~~---------~~------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 240 ---QGR---------VL------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred ---CCC---------CC------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 000 00 011234567899999999999999999999999999996643
No 87
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-37 Score=312.33 Aligned_cols=253 Identities=26% Similarity=0.362 Sum_probs=206.5
Q ss_pred ccCCCCceeeeccceEEEEEEECC-CcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
+.|+..+.||.|.-|+||.++.++ +..+|+|++.+.. .....+.+.|.+||+.++||+++++|+.++.++..++||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 456677899999999999999775 5899999997653 334566778999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 603 EYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||+||+|....++.. ..+++..+..++.+|+-||+||| ..|||+||+||+|||+.++|++-|+||.++.......
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 9999999999988654 67899999999999999999999 9999999999999999999999999999875432100
Q ss_pred C--------------------------------c----------------------cccccccccccccCccCcCCCCCC
Q 040845 682 Q--------------------------------S----------------------MTQTQTLATIGYMAPEYGREGQVS 707 (824)
Q Consensus 682 ~--------------------------------~----------------------~~~~~~~~~~~y~aPE~~~~~~~~ 707 (824)
. . ......+||-.|.|||++.+...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 0 0 011234688899999999999999
Q ss_pred ccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHcccc
Q 040845 708 TNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVE 787 (824)
Q Consensus 708 ~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 787 (824)
.++|.|+|||++|||+.|..||.+.-.. ..+...+... ..++.....+..+.+||++.+.+
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~-~Tl~NIv~~~------------------l~Fp~~~~vs~~akDLIr~LLvK 374 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNK-ETLRNIVGQP------------------LKFPEEPEVSSAAKDLIRKLLVK 374 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCch-hhHHHHhcCC------------------CcCCCCCcchhHHHHHHHHHhcc
Confidence 9999999999999999999999874322 2233222211 11122224567899999999999
Q ss_pred CCCCCCC----HHHHHHH
Q 040845 788 SPEQRIN----AKEIVAK 801 (824)
Q Consensus 788 dP~~Rpt----~~evl~~ 801 (824)
||.+|.. |+||.+|
T Consensus 375 dP~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 375 DPSKRLGSKRGAAEIKRH 392 (459)
T ss_pred ChhhhhccccchHHhhcC
Confidence 9999998 8887765
No 88
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=4.3e-42 Score=341.10 Aligned_cols=424 Identities=28% Similarity=0.396 Sum_probs=320.0
Q ss_pred CcccccccccCCcccccCCCCCcEEEccCCcccccccccccCCCCCCEEeCCCCcCCcccChhhhCcCCCceeeccCCcc
Q 040845 2 PSIINNFLTSTTPKEIDNISNLKVLYLYNNRLQGEIIHEIGHLHNLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTNNSL 81 (824)
Q Consensus 2 ~~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 81 (824)
+.|++|.++...++ +.++..|.+|++.+|++. ..|.+++.+..++.|++|+|+++ .+|+.+..+.+|+.|+++.|.+
T Consensus 50 lils~N~l~~l~~d-l~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~ 126 (565)
T KOG0472|consen 50 LILSHNDLEVLRED-LKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNEL 126 (565)
T ss_pred hhhccCchhhccHh-hhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccccce
Confidence 45677888777665 788888889999999988 67778888999999999999998 8888888899999999999998
Q ss_pred ccccCccccCCCCCccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCCcCcc
Q 040845 82 SGCLSSITDVGLPNLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSSTLDL 161 (824)
Q Consensus 82 ~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 161 (824)
..+++.+.. +..|+.|+..+|+++ ..|+.++.+.+|..|++.+|+++...|+.+. ++.|++||+.+|-++.+|.+
T Consensus 127 ~el~~~i~~--~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~tlP~~- 201 (565)
T KOG0472|consen 127 KELPDSIGR--LLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLETLPPE- 201 (565)
T ss_pred eecCchHHH--Hhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhhcCChh-
Confidence 888888764 778888888999988 6778888888899999999998865555444 88999999999988888754
Q ss_pred cccccCCCCCCCcEEECcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEecCCccCCccchhh
Q 040845 162 SFLSSLSNCKSLTHISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNKLNGSIPITL 241 (824)
Q Consensus 162 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~ 241 (824)
++.+.+|..|+|.+|+|...+ .|.+ ...|++|++..|+|.....+...+++++.+|||.+|+++ ..|+.+
T Consensus 202 -----lg~l~~L~~LyL~~Nki~~lP--ef~g--cs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~ 271 (565)
T KOG0472|consen 202 -----LGGLESLELLYLRRNKIRFLP--EFPG--CSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEI 271 (565)
T ss_pred -----hcchhhhHHHHhhhcccccCC--CCCc--cHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHH
Confidence 678888999999999988765 4544 346888899888888444444558889999999999988 678888
Q ss_pred cCCCCCCEEEcccccCcccCCccccccCCccEEEccCccccccC------------------------------------
Q 040845 242 GKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNKLSGSI------------------------------------ 285 (824)
Q Consensus 242 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~------------------------------------ 285 (824)
+-+.+|+.||+|+|.|+ ..|..++++ +|+.|-+.+|.+..+-
T Consensus 272 clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t 349 (565)
T KOG0472|consen 272 CLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMT 349 (565)
T ss_pred HHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCC
Confidence 88888999999999998 677778888 8888888888653110
Q ss_pred --Ccc---ccCCCCCcEEEcCCCCCCCCCCccccccc---ccccccccccccCcCCccccccccch-hhhcccccccccC
Q 040845 286 --PAC---FSNMTFLKVLSLGSNELTSIPLNFWSLKD---ILDLNLSSNCFSGPLPLEIRNLKALI-EIDFSMNNFSGII 356 (824)
Q Consensus 286 --~~~---~~~l~~L~~L~L~~N~l~~lp~~~~~l~~---L~~L~l~~N~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~ 356 (824)
+.. ...+.+.+.|+++.-+++.+|...|.... ++..+++.|++. .+|..+..++.+. .+.+++|.++ .+
T Consensus 350 ~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv 427 (565)
T KOG0472|consen 350 LPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FV 427 (565)
T ss_pred CCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cc
Confidence 000 11123456677777777777776555444 666777777776 5666665555544 3344444443 56
Q ss_pred CCccCCCCCCCeEEccCccccccCCccccccccccEEEccCcccC-----------------------CCCcccccCCcc
Q 040845 357 PMEIGSLKNLENLFLEYNRLEGSIPDSFGDLISLKSLNLSYNNLS-----------------------GTIPVSLEKLSY 413 (824)
Q Consensus 357 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-----------------------~~~p~~~~~l~~ 413 (824)
|..++.+++|..|+|++|-+. .+|..++.+..|+.||+|+|++. ...|..+.+|.+
T Consensus 428 ~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~n 506 (565)
T KOG0472|consen 428 PLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNMRN 506 (565)
T ss_pred hHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccccchHHHhhHHHHHHHHhccccccccChHHhhhhhh
Confidence 666666666666666666665 46666666666666666666653 233344788889
Q ss_pred cceeeccCCcccCCCCCCCCccccccccccCCccc
Q 040845 414 LKDLNLSFNKLKGEIPRGGSFGNFSAESFKGNELL 448 (824)
Q Consensus 414 L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 448 (824)
|.+|||.+|.+...+|..+.+.++..+.+.|||+.
T Consensus 507 L~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 507 LTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 99999999999988888899999999999999875
No 89
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.1e-37 Score=320.38 Aligned_cols=248 Identities=28% Similarity=0.451 Sum_probs=198.7
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCH
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSL 610 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 610 (824)
+.||+|+||.||+|+.. +++.||+|.+.... .+....+.+|+++++.++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36899999999999864 68999999875432 23456788999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccccccc
Q 040845 611 EKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTL 690 (824)
Q Consensus 611 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 690 (824)
.+++......+++.+++.++.|+++|++||| +.+++||||||+||+++.++.+|++|||++................
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 9999776656899999999999999999999 9999999999999999999999999999987653221111111222
Q ss_pred ccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhh
Q 040845 691 ATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVA 769 (824)
Q Consensus 691 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (824)
.+..|+|||.+.++.++.++||||+|+++|||++ |..||....... ....+.... ....
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--~~~~~~~~~------------------~~~~ 217 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--TREAIEQGV------------------RLPC 217 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--HHHHHHcCC------------------CCCC
Confidence 3567999999998889999999999999999998 888876432111 111110000 0011
Q ss_pred HHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 770 KEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 770 ~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
+..++..+.+++.+||..+|++|||+.|+.+.|+
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 2234667899999999999999999999999875
No 90
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6e-37 Score=329.56 Aligned_cols=264 Identities=21% Similarity=0.314 Sum_probs=203.6
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
.++|++.+.||+|+||.||+|.++ ++..||+|.+..... ...+.+.+|+++++.++|+||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 468999999999999999999876 588999998875432 334678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
|+++|+|.+++.... .+++..+..++.|++.|++||| + .+|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH---~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~- 158 (333)
T cd06650 84 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 158 (333)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc-
Confidence 999999999997655 6888999999999999999999 6 479999999999999999999999999987653221
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcch----------
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTM---------- 752 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------- 752 (824)
.....++..|+|||.+.+..++.++|||||||++|||++|+.||......+ ..............
T Consensus 159 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 233 (333)
T cd06650 159 ---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKE--LELMFGCPVEGDPAESETSPRPRP 233 (333)
T ss_pred ---cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhH--HHHHhcCcccCCccccccCcccCC
Confidence 123458899999999998889999999999999999999999987532211 11110000000000
Q ss_pred -------------------hhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 -------------------EVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 -------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...+... ....... .....+.++.+++.+||+.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 234 PGRPLSSYGPDSRPPMAIFELLDYIV-NEPPPKL-PSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred ccchhhhhcccccccccHHHHHHHHh-cCCCccC-CCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 0000000 0000000 001235678999999999999999999999875
No 91
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.3e-37 Score=336.13 Aligned_cols=264 Identities=19% Similarity=0.194 Sum_probs=200.0
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
..+|++.+.||+|+||.||+|... +++.||+|... ...+.+|++++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 357999999999999999999864 58999999643 23467899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+. ++|.+++.... .+++.+++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|........ .
T Consensus 165 ~~-~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~-~ 238 (391)
T PHA03212 165 YK-TDLYCYLAAKR-NIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA-N 238 (391)
T ss_pred CC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc-c
Confidence 95 68988887654 6889999999999999999999 99999999999999999999999999999975432211 1
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccC------cchhhhhhhhhCCC------cch
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNG------EMTLKHWVNDCLPI------STM 752 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~------~~~~~~~~~~~~~~------~~~ 752 (824)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+...+...... ...
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 223456999999999999889999999999999999999999886542211 11111111111100 000
Q ss_pred hhccc-------cccCchh--hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 EVVDA-------NLLSQED--IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 ~~~~~-------~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...+. ....... .........+.++.+++.+||+.||++||||+|++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00000 0000000 0011112356679999999999999999999999874
No 92
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.1e-37 Score=348.36 Aligned_cols=251 Identities=21% Similarity=0.260 Sum_probs=203.2
Q ss_pred cCCCCceeeeccceEEEEEEEC-C-CcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-D-GMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.|.+.+.||+|+||.||+|... + ++.||+|.+..........+..|+.+++.++||||+++++++..++..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888999999999999999744 3 6788999775554444566788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 606 PHGSLEKYLHSS---NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 606 ~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
++|+|.+++... ...+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..+.....
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988642 246889999999999999999999 99999999999999999999999999999987644332
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...... ........ ..
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~-----~~~~~~~~------------~~ 287 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR-----EIMQQVLY------------GK 287 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHh------------CC
Confidence 22233456899999999999889999999999999999999999998652211 11110000 00
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
. ...+..++..+.+++.+||..||++||++.+++.+
T Consensus 288 ~---~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 288 Y---DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred C---CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 0 00112345678999999999999999999999754
No 93
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.5e-37 Score=321.85 Aligned_cols=254 Identities=27% Similarity=0.428 Sum_probs=205.6
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.+|++.+.||+|+||.||+|.++ +++.||+|.+... ......+.+|++++++++|+||+++++++..+...++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 45788899999999999999865 4889999998643 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 606 PHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 606 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
++++|.+++.... ..+++..+..++.|+++|++||| +.+++||||||+||++++++.+||+|||.+.........
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~- 160 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT- 160 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccceee-
Confidence 9999999997543 46899999999999999999999 999999999999999999999999999999876432211
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
......++..|+|||.+.+..++.++|||||||++|||++ |..||..... ..........
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~~~~~~~~~-------------- 221 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKG-------------- 221 (263)
T ss_pred ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHCC--------------
Confidence 1112234668999999988899999999999999999998 8888765211 1111110000
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
.....+..++..+.+++.+||..+|++|||+.|+++.|+.+
T Consensus 222 -~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 222 -YRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 00011224567799999999999999999999999999764
No 94
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4e-37 Score=320.03 Aligned_cols=254 Identities=29% Similarity=0.459 Sum_probs=206.7
Q ss_pred hccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.++|++.+.||+|++|.||+|.+.+++.||+|.++... ...+.+.+|+.++++++|+||+++++++......++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 45788999999999999999998778899999986542 33567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 606 PHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 606 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
++++|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.++|+|||++........ .
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-~ 159 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY-E 159 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-c
Confidence 9999999997543 56899999999999999999999 99999999999999999999999999999987642211 1
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
.......+..|+|||+..+..++.++||||||+++|||++ |+.||.+..... .... +....+
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~-~~~~~~--------------- 222 (261)
T cd05068 160 AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-VLQQ-VDQGYR--------------- 222 (261)
T ss_pred ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-HHHH-HHcCCC---------------
Confidence 1122223467999999988889999999999999999999 888886532111 1111 110000
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
...+..++..+.+++.+||+.+|++||++.++++.|++
T Consensus 223 ---~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 223 ---MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ---CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 01112345678999999999999999999999999975
No 95
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.9e-37 Score=319.95 Aligned_cols=251 Identities=28% Similarity=0.447 Sum_probs=203.5
Q ss_pred ccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccC
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMP 606 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 606 (824)
.+|++.+.||+|+||.||+|.++++..+|+|.+... ......+.+|+++++.++|+||+++++++......++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 357888999999999999999887788999988643 2234567889999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 040845 607 HGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQ 686 (824)
Q Consensus 607 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 686 (824)
+++|.+++......+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||.++....... ...
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~-~~~ 158 (256)
T cd05059 83 NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY-TSS 158 (256)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceecccccc-ccc
Confidence 99999999876557899999999999999999999 99999999999999999999999999999876532211 111
Q ss_pred ccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 687 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
....++..|+|||...+..++.++||||||+++||+++ |+.||......+ ....+... .
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~------------------~ 218 (256)
T cd05059 159 QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--VVESVSAG------------------Y 218 (256)
T ss_pred CCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--HHHHHHcC------------------C
Confidence 22234567999999998899999999999999999999 788886532211 11111000 0
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
....+..++.++.+++.+||+.+|++|||+.|+++.|
T Consensus 219 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 219 RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0011123567799999999999999999999999876
No 96
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.5e-37 Score=320.85 Aligned_cols=254 Identities=28% Similarity=0.385 Sum_probs=203.5
Q ss_pred ccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 527 DKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.+|++.+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++||||+++++++..++..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 5799999999999999999986 458899999987655455667888999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
++++|.+++.... .+++..+..++.|++.|++||| +.+|+|||++|+||+++.++.++|+|||++..+..... .
T Consensus 89 ~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~--~ 162 (267)
T cd06646 89 GGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA--K 162 (267)
T ss_pred CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeeccccc--c
Confidence 9999999987654 6889999999999999999999 99999999999999999999999999999986532211 1
Q ss_pred cccccccccccCccCcC---CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 686 QTQTLATIGYMAPEYGR---EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
.....++..|+|||.+. ...++.++||||+||++|||++|+.||......+. ...+...... .
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~-------------~ 228 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMSKSNFQ-------------P 228 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-heeeecCCCC-------------C
Confidence 22345788999999874 34578899999999999999999999864321111 0000000000 0
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
........++..+.+++.+||..+|++|||++++++++
T Consensus 229 --~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 229 --PKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred --CCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00001123456789999999999999999999998864
No 97
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.9e-37 Score=336.43 Aligned_cols=254 Identities=24% Similarity=0.301 Sum_probs=197.5
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||+||+|+.. +++.||||+++... ......+..|+.++..++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999765 58999999987542 223456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++|+|.+++...+ .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 81 EFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred cCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence 9999999999998755 7899999999999999999999 99999999999999999999999999999876532110
Q ss_pred c---------------------------------cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCC
Q 040845 683 S---------------------------------MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPT 729 (824)
Q Consensus 683 ~---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~ 729 (824)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 0 0012346999999999999889999999999999999999999999
Q ss_pred cccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccc--cCCCCCCCHHHHHHH
Q 040845 730 DELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTV--ESPEQRINAKEIVAK 801 (824)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~--~dP~~Rpt~~evl~~ 801 (824)
......+ ........ .. . ...+.....+..+.+++.+++. .++..||+++|++++
T Consensus 237 ~~~~~~~-~~~~i~~~--~~-~-------------~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 237 CSETPQE-TYKKVMNW--KE-T-------------LIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCHHH-HHHHHHcC--cC-c-------------ccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 7532111 11111100 00 0 0000001234556777777554 233456899999987
No 98
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.2e-37 Score=340.25 Aligned_cols=253 Identities=24% Similarity=0.347 Sum_probs=201.3
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ......+.+|+.+++.++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46889999999999999999865 58999999997542 233456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++..+.....
T Consensus 81 E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 81 EYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred CCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence 9999999999997655 6899999999999999999999 99999999999999999999999999999876432111
Q ss_pred cc------------------------------------ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCC
Q 040845 683 SM------------------------------------TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRK 726 (824)
Q Consensus 683 ~~------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~ 726 (824)
.. ......||+.|+|||++....++.++||||+||++|||++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 00 001235899999999999889999999999999999999999
Q ss_pred CCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 040845 727 KPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRIN---AKEIVAK 801 (824)
Q Consensus 727 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt---~~evl~~ 801 (824)
.||......+ ....... .. ..........++..+.+++.+|+. +|.+|++ +.|++++
T Consensus 237 ~Pf~~~~~~~-~~~~i~~----~~------------~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 237 PPFCSDNPQE-TYRKIIN----WK------------ETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCHHH-HHHHHHc----CC------------CccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 9997532111 0111000 00 000000011235568899999996 9999998 9998875
No 99
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.2e-37 Score=324.95 Aligned_cols=256 Identities=25% Similarity=0.448 Sum_probs=203.2
Q ss_pred hhccCCCCceeeeccceEEEEEEEC------CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCe
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIR------DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEF 597 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 597 (824)
..++|++.+.||+|+||.||+|.+. ++..||||++.... ......+.+|+.+++.++|+||+++++++.+...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999999753 24679999875432 2234567889999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhhCC---------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 040845 598 KALVLEYMPHGSLEKYLHSSN---------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 668 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 668 (824)
.++||||+++++|.+++.... ...++..+..++.|++.|++||| +.+++|+||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEE
Confidence 999999999999999987532 23577889999999999999999 899999999999999999999999
Q ss_pred eecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhC
Q 040845 669 SDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCL 747 (824)
Q Consensus 669 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 747 (824)
+|||++................++..|+|||++.++.++.++|||||||++|||++ |..||.+.... .....+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--~~~~~~~~-- 236 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--QVLRFVME-- 236 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc--
Confidence 99999876543332222223345788999999998889999999999999999999 67887653211 11111100
Q ss_pred CCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 748 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
.... ..+..++..+.+++.+||+.||++|||+.|+++.|+
T Consensus 237 ---------~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 237 ---------GGLL-------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred ---------CCcC-------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 0000 011234567899999999999999999999999886
No 100
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.9e-37 Score=332.38 Aligned_cols=242 Identities=24% Similarity=0.341 Sum_probs=195.6
Q ss_pred ceeeeccceEEEEEEE----CCCcEEEEEEeeccc----cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 533 NLIGRGGFGSVYKARI----RDGMEVAVKVFNLQC----GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+.||+|+||.||+|+. .+++.||||+++... ......+..|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999975 357899999987532 12334567899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+++++|.+++.... .+.+..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 155 (323)
T cd05584 82 LSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT-- 155 (323)
T ss_pred CCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC--
Confidence 99999999997655 6788888999999999999999 99999999999999999999999999999875432221
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchh
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
......|++.|+|||++.+..++.++||||+||++|||++|+.||...... ........ .
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~~~~~~~--------~------- 215 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KTIDKILK--------G------- 215 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HHHHHHHc--------C-------
Confidence 122346899999999998888999999999999999999999998753211 11111000 0
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
....+..++..+.+++.+||+.||++|| ++.+++++
T Consensus 216 -~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 216 -KLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred -CCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 0011123456688999999999999999 88888775
No 101
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.2e-37 Score=324.81 Aligned_cols=255 Identities=27% Similarity=0.460 Sum_probs=204.2
Q ss_pred ccCCCCceeeeccceEEEEEEE-----CCCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARI-----RDGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
++|++.+.||+|+||.||+|.+ .++..||+|.+.... ......+.+|++++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4678889999999999999974 246789999986433 2334678889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCC----------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC
Q 040845 601 VLEYMPHGSLEKYLHSSN----------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM 664 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 664 (824)
||||+++++|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCC
Confidence 999999999999985321 24788889999999999999999 99999999999999999999
Q ss_pred cEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhh
Q 040845 665 VAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWV 743 (824)
Q Consensus 665 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 743 (824)
.+|++|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||..... ......+
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~~~~~~ 239 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEMV 239 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH
Confidence 999999999987644332222333446778999999988889999999999999999999 8888865211 1111111
Q ss_pred hhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 744 NDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
.... ....+..++..+.+++.+||+.||++||++.++.++|++
T Consensus 240 ~~~~------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 240 RKRQ------------------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HcCC------------------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1100 001122456678999999999999999999999999864
No 102
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=8.1e-37 Score=318.95 Aligned_cols=258 Identities=24% Similarity=0.346 Sum_probs=207.2
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||.||+|+.. +++.||||.+.... ......+..|+++++.++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57899999999999999999864 68999999875432 233456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 603 EYMPHGSLEKYLHS---SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 603 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
||+++++|.+++.. ....+++..+..++.|++.|++||| +.+++|+||||+||+++.++.++++|||.+..+..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999988853 2245788999999999999999999 99999999999999999999999999999886543
Q ss_pred CCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 680 EDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 680 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
... ......++..|+|||.+.+..++.++|+||+|+++|||++|+.||...........+.+.... .
T Consensus 159 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~--------~--- 225 (267)
T cd08228 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD--------Y--- 225 (267)
T ss_pred hhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC--------C---
Confidence 221 122345788999999998888999999999999999999999998653221111111111000 0
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
.......++..+.+++.+||..+|++||++.++++.++.++
T Consensus 226 ------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 226 ------PPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ------CCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 00011234567899999999999999999999999998763
No 103
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.7e-37 Score=338.81 Aligned_cols=253 Identities=22% Similarity=0.276 Sum_probs=198.5
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
.|+..+.||+|+||+||+|+.. +++.||||++.... ....+.+..|+.+++.++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999764 58899999997542 2334568889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..+......
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 82 YIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 999999999997765 6888899999999999999999 999999999999999999999999999998643211000
Q ss_pred ---------------------------------------------cccccccccccccCccCcCCCCCCccchHHHHHHH
Q 040845 684 ---------------------------------------------MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 718 (824)
Q Consensus 684 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~ 718 (824)
.......||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 00123469999999999988889999999999999
Q ss_pred HHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHH--ccccCCCCCCCHH
Q 040845 719 LMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALE--CTVESPEQRINAK 796 (824)
Q Consensus 719 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--cl~~dP~~Rpt~~ 796 (824)
+|||++|+.||......+.. ...... .. .........++.++.+++.+ |+..+|..||++.
T Consensus 238 l~elltG~~Pf~~~~~~~~~-~~i~~~--~~--------------~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~ 300 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQ-LKVINW--EN--------------TLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGAD 300 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHH-HHHHcc--cc--------------ccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHH
Confidence 99999999999763221111 110000 00 00000111245667888888 5556666799999
Q ss_pred HHHHH
Q 040845 797 EIVAK 801 (824)
Q Consensus 797 evl~~ 801 (824)
|+++|
T Consensus 301 ~~l~h 305 (381)
T cd05626 301 DIKAH 305 (381)
T ss_pred HHhcC
Confidence 99986
No 104
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=7.9e-38 Score=336.82 Aligned_cols=253 Identities=23% Similarity=0.332 Sum_probs=203.3
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||+||+|+.. +|+.||+|+++... ....+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36889999999999999999865 58999999997542 234456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..+.....
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 999999999999887567899999999999999999999 99999999999999999999999999999987643322
Q ss_pred ccccccccccccccCccCcC------CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcc
Q 040845 683 SMTQTQTLATIGYMAPEYGR------EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVD 756 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~------~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (824)
. ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ..........
T Consensus 158 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~~i~~~~------ 225 (330)
T cd05601 158 V-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-----KTYNNIMNFQ------ 225 (330)
T ss_pred e-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-----HHHHHHHcCC------
Confidence 2 223346899999999886 456789999999999999999999998653211 1111100000
Q ss_pred ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 757 ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....+.....+..+.+++.+|++ +|++|||+++++++
T Consensus 226 ------~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 226 ------RFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ------CccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 000000111345668899999998 99999999999875
No 105
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-38 Score=309.99 Aligned_cols=267 Identities=24% Similarity=0.333 Sum_probs=227.3
Q ss_pred HhhccCCCCceeeeccceEEEEEEECC------CcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeec-C
Q 040845 524 QATDKFSENNLIGRGGFGSVYKARIRD------GMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSN-E 595 (824)
Q Consensus 524 ~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 595 (824)
....+++...++-+|.||.||+|.|.+ .+.|-||.++.... .....+..|..++..+.|||+.++.+++.+ .
T Consensus 281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDY 360 (563)
T ss_pred hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeecc
Confidence 334567778889999999999997653 34567777654433 345677889999999999999999999855 5
Q ss_pred CeeEEEEeccCCCCHHHHhhhCC-------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 040845 596 EFKALVLEYMPHGSLEKYLHSSN-------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 668 (824)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 668 (824)
+.++.++.++.-|+|..|+.-.+ ..++..+.+.++.|++.|++||| .++|||.||.++|.++|+..++||
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~LqVkl 437 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQVKL 437 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhheeEEe
Confidence 67889999999999999998322 45777888999999999999999 999999999999999999999999
Q ss_pred eecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhC
Q 040845 669 SDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCL 747 (824)
Q Consensus 669 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 747 (824)
+|-.+++.+.+.+++.-......+..||+||.+....|+.++|||||||++|||+| |+.|+.+..+.++ ..+
T Consensus 438 tDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm--~~y----- 510 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM--EHY----- 510 (563)
T ss_pred ccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH--HHH-----
Confidence 99999999999999888888889999999999999999999999999999999999 8889876433221 222
Q ss_pred CCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhcccc
Q 040845 748 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSLLRNV 813 (824)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~ 813 (824)
-..+.++.+|-+||++++.+|..||+.+|++||+++|++.-|.++..++.+++
T Consensus 511 -------------lkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt~YV 563 (563)
T KOG1024|consen 511 -------------LKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLTRYV 563 (563)
T ss_pred -------------HhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHhhcC
Confidence 22356777888999999999999999999999999999999999998887753
No 106
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=9.5e-37 Score=322.50 Aligned_cols=267 Identities=27% Similarity=0.366 Sum_probs=197.2
Q ss_pred ccCCCCceeeeccceEEEEEEEC--CCcEEEEEEeecccc--chhhhHHHHHHHHhcC---CCCcceeEEeeee-----c
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR--DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSI---RHRNLVKVISSCS-----N 594 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~-----~ 594 (824)
.+|++.+.||+|+||.||+|+.. +++.||+|+++.... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36889999999999999999863 368899999865432 2234556677777766 6999999999885 3
Q ss_pred CCeeEEEEeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccc
Q 040845 595 EEFKALVLEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 673 (824)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 673 (824)
....++||||++ ++|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456889999996 69999987543 45889999999999999999999 99999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhC-CCc--
Q 040845 674 AKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCL-PIS-- 750 (824)
Q Consensus 674 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~-- 750 (824)
+...... .......+++.|+|||.+.+..++.++||||+||++|||++|++||......+ .+........ +..
T Consensus 157 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~~ 232 (290)
T cd07862 157 ARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEED 232 (290)
T ss_pred eEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhh
Confidence 9865422 12234568999999999988889999999999999999999999997632211 1111111110 000
Q ss_pred c-hhh-ccccccC-chhh-hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 751 T-MEV-VDANLLS-QEDI-HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 751 ~-~~~-~~~~~~~-~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
. .+. ....... .... .......++..+.+++.+|++.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 233 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred chhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0 000 0000000 0000 000112356778899999999999999999999864
No 107
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5.8e-37 Score=334.84 Aligned_cols=259 Identities=25% Similarity=0.413 Sum_probs=205.6
Q ss_pred hccCCCCceeeeccceEEEEEEEC------CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCC-CCcceeEEeeeecCCe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR------DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIR-HRNLVKVISSCSNEEF 597 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 597 (824)
.++|.+.+.||+|+||.||+|++. .+..||||+++... ....+.+..|+.++.++. ||||+++++++.....
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 456888899999999999999864 24689999997543 223456888999999997 9999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhhCC-----------------------------------------------------------
Q 040845 598 KALVLEYMPHGSLEKYLHSSN----------------------------------------------------------- 618 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------- 618 (824)
.++||||+++|+|.+++++.+
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 999999999999999996532
Q ss_pred --------------------------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee
Q 040845 619 --------------------------------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 660 (824)
Q Consensus 619 --------------------------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 660 (824)
..+++..++.++.|++.|++||| +.+++||||||+||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceEEE
Confidence 13567788899999999999999 9999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchh
Q 040845 661 DDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTL 739 (824)
Q Consensus 661 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~ 739 (824)
++++.+|++|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||......+. .
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~-~ 351 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ-F 351 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH-H
Confidence 9999999999999986543222222223456788999999988889999999999999999998 8888865322111 0
Q ss_pred hhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 740 KHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
...+. .. .+...+..++.++.+++.+||..+|++||+++|+++.|+++.
T Consensus 352 ~~~~~------------~~------~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 352 YNAIK------------RG------YRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHH------------cC------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 10000 00 001112235677999999999999999999999999998763
No 108
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=5.9e-37 Score=323.03 Aligned_cols=270 Identities=27% Similarity=0.426 Sum_probs=206.0
Q ss_pred ccCCCCceeeeccceEEEEEEEC-----CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeec--CCeeE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-----DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSN--EEFKA 599 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 599 (824)
..|++.+.||+|+||.||+|..+ +++.||+|.+........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46888899999999999999753 478999999876555556778899999999999999999998743 45678
Q ss_pred EEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 600 LVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
+||||+++++|.+++...+..+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||++.....
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 999999999999999876657899999999999999999999 99999999999999999999999999999987643
Q ss_pred CCCccc-cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCc--chhhcc
Q 040845 680 EDQSMT-QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIS--TMEVVD 756 (824)
Q Consensus 680 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 756 (824)
...... .....++..|+|||...+..++.++|||||||++|||++|..|+...... ............ .....+
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhcccccccccchHHHHH
Confidence 322211 11222445699999998888999999999999999999988775432110 000000000000 000000
Q ss_pred ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 757 ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
. . ........+..++..+.+++.+||..+|++||||+|+++.|+++
T Consensus 238 ~--~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 238 L--L-KNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred H--H-hcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0 0 00011112335667899999999999999999999999999875
No 109
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.1e-37 Score=338.88 Aligned_cols=253 Identities=27% Similarity=0.378 Sum_probs=205.2
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||+||+|+.. +|+.||||+++... ......+..|+++++.++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46889999999999999999865 68999999987542 234567888999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC-
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED- 681 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~- 681 (824)
||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 999999999999876 37899999999999999999999 9999999999999999999999999999998664332
Q ss_pred --------------------------CccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccC
Q 040845 682 --------------------------QSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNG 735 (824)
Q Consensus 682 --------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~ 735 (824)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 001223456899999999999999999999999999999999999999763211
Q ss_pred cchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCC-HHHHHHH
Q 040845 736 EMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRIN-AKEIVAK 801 (824)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-~~evl~~ 801 (824)
+ ....... .. .. ...+....++..+.+++.+|+. ||++||+ ++|++++
T Consensus 237 ~-~~~~i~~----~~------~~------~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 237 E-TYNKIIN----WK------ES------LRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred H-HHHHHhc----cC------Cc------ccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 1 0011000 00 00 0000011146678899999997 9999999 9999986
No 110
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=5.8e-37 Score=322.11 Aligned_cols=260 Identities=24% Similarity=0.392 Sum_probs=206.9
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCc----EEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGM----EVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKA 599 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 599 (824)
.++|+..+.||+|+||+||+|++. +|+ .||+|++..... ...+.+..|+.+++.++|+||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 357888899999999999999854 344 489999865432 3356678899999999999999999998764 467
Q ss_pred EEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 600 LVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
+++||+++|+|.+++......+++.+++.++.|+++|++||| +.+|+||||||+||++++++.+||+|||+++....
T Consensus 85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 999999999999999876657899999999999999999999 99999999999999999999999999999987643
Q ss_pred CCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhcccc
Q 040845 680 EDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDAN 758 (824)
Q Consensus 680 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (824)
...........++..|+|||...+..++.++|||||||++||+++ |..||..... .....++.....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~---------- 229 (279)
T cd05109 162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLLEKGER---------- 229 (279)
T ss_pred ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCc----------
Confidence 332222222345678999999988889999999999999999998 8888865322 112222221100
Q ss_pred ccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 040845 759 LLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSL 809 (824)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 809 (824)
...+..++..+.+++.+||..||++||++.|+++.++++....
T Consensus 230 --------~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 230 --------LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred --------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 0011234567899999999999999999999999998775544
No 111
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.5e-37 Score=334.64 Aligned_cols=248 Identities=24% Similarity=0.359 Sum_probs=194.4
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
++|+..+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+++++.++|+||+++++++.+.+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 45667789999999999999865 589999999865432 3346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+++|+|.+.. ..++..+..++.||+.||+||| +.+|+||||||+||++++++.+||+|||++..+.....
T Consensus 154 ~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-- 223 (353)
T PLN00034 154 MDGGSLEGTH-----IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD-- 223 (353)
T ss_pred CCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc--
Confidence 9999986532 3567778899999999999999 99999999999999999999999999999986542211
Q ss_pred ccccccccccccCccCcCC-----CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 685 TQTQTLATIGYMAPEYGRE-----GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
......||..|+|||.+.. ...+.++|||||||++|||++|+.||......+ .........
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~~~~------------ 289 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD--WASLMCAIC------------ 289 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHh------------
Confidence 1233468999999998743 234578999999999999999999997322111 111000000
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.. .....+..++.++.+++.+||+.||++|||+.|++++
T Consensus 290 ~~---~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 290 MS---QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred cc---CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0001122456678999999999999999999999986
No 112
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.2e-37 Score=334.22 Aligned_cols=242 Identities=24% Similarity=0.288 Sum_probs=196.4
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHG 608 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 608 (824)
+.||+|+||.||+|+.. +|+.||+|++.... ......+..|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 58999999997542 233456678999999999999999999999999999999999999
Q ss_pred CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 609 SLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 609 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
+|.+++.... .+++.++..++.|++.||+||| + .+|+||||||+||+++.++.+||+|||++........ ...
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~ 154 (325)
T cd05594 81 ELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMK 154 (325)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc--ccc
Confidence 9999987655 6899999999999999999999 7 7999999999999999999999999999875432211 122
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~-----~~~~~i~~~~----------------~ 213 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILMEE----------------I 213 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH-----HHHHHHhcCC----------------C
Confidence 346899999999999889999999999999999999999999653211 1111000000 0
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
..+...+..+.+++.+||+.||++|+ ++.+++++
T Consensus 214 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 214 RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 01123456788999999999999997 89999876
No 113
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=8.6e-37 Score=321.55 Aligned_cols=268 Identities=26% Similarity=0.427 Sum_probs=205.1
Q ss_pred cC-CCCceeeeccceEEEEEEE-----CCCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeec--CCee
Q 040845 528 KF-SENNLIGRGGFGSVYKARI-----RDGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSN--EEFK 598 (824)
Q Consensus 528 ~~-~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 598 (824)
+| +..+.||+|+||+||.+.+ .+++.||+|+++.... ...+.+.+|++++++++||||+++++++.. ....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 44 7889999999999988653 3578899999875432 345678889999999999999999998765 3467
Q ss_pred EEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 599 ALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
++||||+++++|.+++... .+++.++..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++....
T Consensus 84 ~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 8999999999999999764 4899999999999999999999 9999999999999999999999999999998664
Q ss_pred CCCCcc-ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCC-Ccchhhcc
Q 040845 679 GEDQSM-TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLP-ISTMEVVD 756 (824)
Q Consensus 679 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 756 (824)
...... ......++..|+|||...+..++.++||||||+++|||+||+.||............+...... ....+..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE 238 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhh
Confidence 322211 1122335667999999988889999999999999999999999986532211111111000000 00011111
Q ss_pred ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 757 ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
.. .....+..++..+.+++.+||+.+|++|||++++++.|+++.
T Consensus 239 ~~------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 239 RG------MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred cC------CCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11 111123356778999999999999999999999999998864
No 114
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.2e-37 Score=330.86 Aligned_cols=245 Identities=24% Similarity=0.333 Sum_probs=195.0
Q ss_pred CCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHH---hcCCCCcceeEEeeeecCCeeEEE
Q 040845 529 FSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMM---KSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
|++.+.||+|+||.||+|.+. +++.||||+++... ....+.+..|+.++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 667889999999999999865 58999999997542 22344566666554 567899999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||+++++|..++... .+++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+|||++.......
T Consensus 81 ~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 81 MEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC
Confidence 9999999999888653 5899999999999999999999 9999999999999999999999999999987532221
Q ss_pred CccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 682 QSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
.......|++.|+|||.+.+..++.++|||||||++|||++|+.||......+ ........
T Consensus 156 --~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~-~~~~i~~~---------------- 216 (324)
T cd05589 156 --DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE-VFDSIVND---------------- 216 (324)
T ss_pred --CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhC----------------
Confidence 12234568999999999998899999999999999999999999987532111 01111000
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
....+..++..+.+++.+||+.||++|| ++.+++++
T Consensus 217 ----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 217 ----EVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred ----CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 0001123456788999999999999999 57777665
No 115
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=4.8e-37 Score=322.74 Aligned_cols=255 Identities=29% Similarity=0.470 Sum_probs=205.0
Q ss_pred ccCCCCceeeeccceEEEEEEEC------CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR------DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
.+|...+.||+|+||.||+|... ++..||+|.+........+.+.+|+++++.++|+||+++++++.+....++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 46777899999999999999642 356899998875555556789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcE
Q 040845 601 VLEYMPHGSLEKYLHSSN--------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVA 666 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 666 (824)
||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCE
Confidence 999999999999997643 24788999999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhh
Q 040845 667 HLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVND 745 (824)
Q Consensus 667 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 745 (824)
||+|||++................+++.|+|||.+.+..++.++|||||||++|||++ |..||......+ .......
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~ 239 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE--AIECITQ 239 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH--HHHHHHc
Confidence 9999999976543322222223345778999999988899999999999999999998 888886532211 1110000
Q ss_pred hCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 746 CLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
. .....+..++..+.+++.+||+.||++||+++|+.+.|++
T Consensus 240 ~------------------~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 240 G------------------RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred C------------------ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 0 0001112456678999999999999999999999998863
No 116
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.5e-37 Score=327.43 Aligned_cols=259 Identities=29% Similarity=0.470 Sum_probs=207.0
Q ss_pred hhccCCCCceeeeccceEEEEEEECC------CcEEEEEEeeccc-cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCC
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIRD------GMEVAVKVFNLQC-GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEE 596 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 596 (824)
..++|++.+.||+|+||.||+|.+.. ...||+|.+.... ......+.+|+++++++ +|+||+++++++..+.
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 34678889999999999999998642 3679999886542 23345688899999999 8999999999999999
Q ss_pred eeEEEEeccCCCCHHHHhhhC---------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC
Q 040845 597 FKALVLEYMPHGSLEKYLHSS---------------NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD 661 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~ 661 (824)
..+++|||+++|+|.+++... ...+++..+..++.|++.|++||| +.+|+||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEEc
Confidence 999999999999999998642 246889999999999999999999 99999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhh
Q 040845 662 DNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLK 740 (824)
Q Consensus 662 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~ 740 (824)
.++.+|++|||.++.+.............++..|+|||...+..++.++|||||||++||+++ |..||......+ ..
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~ 244 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--LF 244 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH--HH
Confidence 999999999999987654332222222335678999999988889999999999999999998 888876532111 11
Q ss_pred hhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 741 HWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
..... . .....+..++..+.+++.+||..||++|||+.|+++.|+++.
T Consensus 245 ~~~~~------------~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 245 KLLKE------------G------YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHc------------C------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11000 0 000112234667899999999999999999999999998864
No 117
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=5.1e-37 Score=322.81 Aligned_cols=260 Identities=23% Similarity=0.387 Sum_probs=209.8
Q ss_pred hccCCCCceeeeccceEEEEEEECC-----CcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeec-CCee
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD-----GMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSN-EEFK 598 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 598 (824)
.++|++.+.||+|+||.||+|.+.+ +..||+|.+.... ....+.+.+|+.++++++|+||+++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678899999999999999998765 6889999886442 2335668889999999999999999998765 5778
Q ss_pred EEEEeccCCCCHHHHhhhCC-------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeec
Q 040845 599 ALVLEYMPHGSLEKYLHSSN-------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDF 671 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 671 (824)
++++||+++++|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.+|++||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCC
Confidence 89999999999999987542 35889999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCc
Q 040845 672 GIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPIS 750 (824)
Q Consensus 672 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 750 (824)
|+++.+.............++..|+|||.+.+..++.++||||||+++||+++ |+.||..... .....++....
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~--- 236 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLKDGY--- 236 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHHcCC---
Confidence 99986644333222233346778999999988889999999999999999999 9999865321 12222222111
Q ss_pred chhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 040845 751 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDS 808 (824)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 808 (824)
....+..++..+.+++.+||..||++|||+.|+++.|+++...
T Consensus 237 ---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 237 ---------------RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred ---------------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 0011123456789999999999999999999999999988654
No 118
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-38 Score=331.11 Aligned_cols=251 Identities=24% Similarity=0.396 Sum_probs=211.1
Q ss_pred CCCceeeeccceEEEEEEECC--C--cEEEEEEeeccccc-hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 530 SENNLIGRGGFGSVYKARIRD--G--MEVAVKVFNLQCGR-AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 530 ~~~~~lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
...++||+|+||.|++|.|.. | -.||||.++..... ...+|.+|+.+|-+|+|+|++++||+.-+ ....+|||.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 445789999999999999864 3 36899999765433 67889999999999999999999999987 566799999
Q ss_pred cCCCCHHHHhhh-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHS-SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
++.|+|.+.++. ....+-....-.++.|||.|+.||. .+++||||+.++|+++.....+||+|||+++-+..++..
T Consensus 192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 999999999987 4456778888899999999999999 999999999999999999999999999999988766555
Q ss_pred ccc-ccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 684 MTQ-TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 684 ~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
+.. .....+..|+|||.+....++.++|||+|||.+|||+| |..||-+... ....+.+|
T Consensus 269 Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--------------~qIL~~iD----- 329 (1039)
T KOG0199|consen 269 YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--------------IQILKNID----- 329 (1039)
T ss_pred eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--------------HHHHHhcc-----
Confidence 443 34557889999999999999999999999999999999 6778765211 11122223
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
...++..+..|++.++++|++||+.+|++||||..+.+.+-.
T Consensus 330 -~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 330 -AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred -ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 334666778999999999999999999999999999855543
No 119
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.7e-37 Score=325.81 Aligned_cols=260 Identities=26% Similarity=0.431 Sum_probs=208.1
Q ss_pred hccCCCCceeeeccceEEEEEEEC--------CCcEEEEEEeeccc-cchhhhHHHHHHHHhcC-CCCcceeEEeeeecC
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR--------DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNE 595 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 595 (824)
.++|.+.+.||+|+||.||+|++. ++..||+|...... ....+.+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 467888999999999999999742 24579999886442 23456788999999999 899999999999999
Q ss_pred CeeEEEEeccCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee
Q 040845 596 EFKALVLEYMPHGSLEKYLHSSN---------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 660 (824)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 660 (824)
...++||||+++|+|.+++.... ..+++.++..++.|+++|++||| +.+++||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEEE
Confidence 99999999999999999997532 24778889999999999999999 9999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchh
Q 040845 661 DDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTL 739 (824)
Q Consensus 661 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~ 739 (824)
++++.+||+|||.++...............++..|+|||.+.+..++.++||||||+++||+++ |..||.... .
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~ 245 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----V 245 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----H
Confidence 9999999999999987643333222233346678999999988889999999999999999998 777775421 1
Q ss_pred hhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 040845 740 KHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDS 808 (824)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 808 (824)
..+....... .....+..++..+.+++.+||..+|++|||+.|+++.|+++...
T Consensus 246 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 246 EELFKLLKEG---------------HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHHHHcC---------------CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1111111000 00111234567899999999999999999999999999988653
No 120
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.7e-37 Score=347.19 Aligned_cols=256 Identities=23% Similarity=0.319 Sum_probs=204.9
Q ss_pred HHhhccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCC---
Q 040845 523 FQATDKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEE--- 596 (824)
Q Consensus 523 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 596 (824)
....++|.+.+.||+|+||+||+|+. .+|+.||||++.... ......+.+|+..+..++|+|++++++.+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34457999999999999999999975 468999999986542 233456788999999999999999988764332
Q ss_pred -----eeEEEEeccCCCCHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 040845 597 -----FKALVLEYMPHGSLEKYLHSSN---YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 668 (824)
Q Consensus 597 -----~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 668 (824)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEE
Confidence 3679999999999999986532 46889999999999999999999 999999999999999999999999
Q ss_pred eecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCC
Q 040845 669 SDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLP 748 (824)
Q Consensus 669 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 748 (824)
+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...++.....
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~~~~~~~~ 259 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEEVMHKTLA 259 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHhc
Confidence 99999987643322222334568999999999999899999999999999999999999986521 1111111110
Q ss_pred CcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 749 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.. ....+..++..+.+++.+||+.||++||++.+++++
T Consensus 260 ~~---------------~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 260 GR---------------YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CC---------------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 00 001123456779999999999999999999999875
No 121
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.6e-37 Score=338.81 Aligned_cols=253 Identities=23% Similarity=0.303 Sum_probs=198.6
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+++++.++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46888999999999999999764 68999999986532 233456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 81 EFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 9999999999997654 6888999999999999999999 99999999999999999999999999999964321100
Q ss_pred c---------------------------------------------cccccccccccccCccCcCCCCCCccchHHHHHH
Q 040845 683 S---------------------------------------------MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGI 717 (824)
Q Consensus 683 ~---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~ 717 (824)
. .......||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 0 0001246899999999998889999999999999
Q ss_pred HHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCC---CC
Q 040845 718 MLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQR---IN 794 (824)
Q Consensus 718 ~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---pt 794 (824)
++|||++|..||......+ ........ .. . ...+....++..+.+++.+|+. +|.+| ++
T Consensus 237 il~elltG~~Pf~~~~~~~-~~~~i~~~--~~-~-------------~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~ 298 (377)
T cd05629 237 IMFECLIGWPPFCSENSHE-TYRKIINW--RE-T-------------LYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGG 298 (377)
T ss_pred hhhhhhcCCCCCCCCCHHH-HHHHHHcc--CC-c-------------cCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence 9999999999996532111 11111100 00 0 0000011235568899999997 67665 59
Q ss_pred HHHHHHH
Q 040845 795 AKEIVAK 801 (824)
Q Consensus 795 ~~evl~~ 801 (824)
+.|++++
T Consensus 299 ~~~~l~h 305 (377)
T cd05629 299 AHEIKSH 305 (377)
T ss_pred HHHHhcC
Confidence 9999887
No 122
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.1e-37 Score=331.55 Aligned_cols=252 Identities=23% Similarity=0.286 Sum_probs=199.5
Q ss_pred cCCCCceeeeccceEEEEEEE----CCCcEEEEEEeeccc----cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCee
Q 040845 528 KFSENNLIGRGGFGSVYKARI----RDGMEVAVKVFNLQC----GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFK 598 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 598 (824)
+|++.+.||+|+||.||+|+. .+++.||+|++.... ....+.+..|+.+++.+ +|++|+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999975 257899999986432 22345677899999999 589999999999999999
Q ss_pred EEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 599 ALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
++||||+++|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..+.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 99999999999999997654 6889999999999999999999 9999999999999999999999999999998654
Q ss_pred CCCCccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 679 GEDQSMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 679 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
..... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||........ ...+....... +
T Consensus 157 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~~~~~~~------~- 227 (332)
T cd05614 157 SEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVSRRILKC------D- 227 (332)
T ss_pred ccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHHHHHhcC------C-
Confidence 32221 12234689999999998765 478999999999999999999999964322111 11111110000 0
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
...+...+..+.+++.+||+.||++|| +++|++++
T Consensus 228 ---------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 228 ---------PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 001123456688999999999999999 77888775
No 123
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4e-37 Score=330.16 Aligned_cols=247 Identities=21% Similarity=0.264 Sum_probs=197.4
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCC-cceeEEeeeecCCeeEEEE
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHR-NLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ 602 (824)
+|++.+.||+|+||.||+|+.+ +++.||||++.... ....+.+..|+.++..++|+ +|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999865 47899999987542 23456677899999999764 6888999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05587 81 EYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK 156 (324)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC
Confidence 9999999999997655 6889999999999999999999 99999999999999999999999999999875322111
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
......||+.|+|||++.+..++.++||||+||++|||+||+.||......+ ....+. ...
T Consensus 157 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~--~~~~i~---~~~------------ 217 (324)
T cd05587 157 --TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE--LFQSIM---EHN------------ 217 (324)
T ss_pred --ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH--HHHHHH---cCC------------
Confidence 2233468999999999999899999999999999999999999997532111 111110 000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCH-----HHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINA-----KEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~-----~evl~~ 801 (824)
...+...+..+.+++.+||..||.+|+++ +++.++
T Consensus 218 ----~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 218 ----VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred ----CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 00111235568899999999999999976 566654
No 124
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.8e-37 Score=326.62 Aligned_cols=260 Identities=27% Similarity=0.420 Sum_probs=206.6
Q ss_pred hccCCCCceeeeccceEEEEEEEC--------CCcEEEEEEeeccc-cchhhhHHHHHHHHhcC-CCCcceeEEeeeecC
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR--------DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNE 595 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 595 (824)
.++|.+.+.||+|+||.||+|++. ++..||+|.++... ......+..|+++++.+ +|+||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 357899999999999999999753 23579999987542 23445678899999999 799999999999999
Q ss_pred CeeEEEEeccCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee
Q 040845 596 EFKALVLEYMPHGSLEKYLHSSN---------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 660 (824)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 660 (824)
+..++||||+++|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEE
Confidence 99999999999999999997542 24788999999999999999999 9999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchh
Q 040845 661 DDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTL 739 (824)
Q Consensus 661 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~ 739 (824)
+.++.+||+|||.+................++..|+|||.+.+..++.++||||+||++|||++ |..||.....
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~----- 248 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----- 248 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-----
Confidence 9999999999999876543222111222234568999999988889999999999999999998 7888754211
Q ss_pred hhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 040845 740 KHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDS 808 (824)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 808 (824)
......... . .....+..++.++.+++.+||..+|++|||+.|+++.|+++...
T Consensus 249 ~~~~~~~~~---------~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 249 EELFKLLKE---------G------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHHHHHc---------C------CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 111111000 0 00111224566789999999999999999999999999998764
No 125
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3e-37 Score=330.09 Aligned_cols=242 Identities=24% Similarity=0.309 Sum_probs=194.2
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||.||+|+.+ +++.||||++.... ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 58899999987542 23445667788888876 699999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--~~~~ 154 (320)
T cd05590 81 GDLMFHIQKSR-RFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--KTTS 154 (320)
T ss_pred chHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--Cccc
Confidence 99999987665 6899999999999999999999 9999999999999999999999999999987542221 1223
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...||+.|+|||.+.+..++.++||||+||++|||++|+.||...... .......... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~~i~~~~----------------~ 213 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-----DLFEAILNDE----------------V 213 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-----HHHHHHhcCC----------------C
Confidence 346899999999999888999999999999999999999999753211 1111111000 0
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCH------HHHHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINA------KEIVAK 801 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~------~evl~~ 801 (824)
..+..++..+.+++.+|++.||++||++ ++++++
T Consensus 214 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 214 VYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 0011235568899999999999999998 555554
No 126
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.1e-37 Score=322.81 Aligned_cols=255 Identities=28% Similarity=0.446 Sum_probs=202.9
Q ss_pred hccCCCCceeeeccceEEEEEEECC------CcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCee
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD------GMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFK 598 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 598 (824)
.++|.+.+.||+|+||.||+|.+.+ +..||+|.+..... .....+..|+.+++.++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4678999999999999999998753 56799998764432 2345688899999999999999999999998899
Q ss_pred EEEEeccCCCCHHHHhhhCC------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC---cEEEe
Q 040845 599 ALVLEYMPHGSLEKYLHSSN------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM---VAHLS 669 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~ 669 (824)
++||||+++++|.+++...+ ..+++.++..++.||+.|++||| +.+++||||||+||+++.++ .+|++
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEec
Confidence 99999999999999997654 25889999999999999999999 99999999999999998654 69999
Q ss_pred ecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCC
Q 040845 670 DFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLP 748 (824)
Q Consensus 670 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 748 (824)
|||+++................+..|+|||++.+..++.++|||||||++|||++ |..||......+ ....+....
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~- 238 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--VMEFVTGGG- 238 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHcCC-
Confidence 9999987633222222222234568999999988899999999999999999997 888886532211 111111000
Q ss_pred CcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 749 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
....+..++..+.+++.+||+.+|++||++.+++++|.
T Consensus 239 -----------------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 239 -----------------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred -----------------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 00112234667899999999999999999999999985
No 127
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.4e-37 Score=328.19 Aligned_cols=241 Identities=22% Similarity=0.297 Sum_probs=191.2
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||.||+|+.. +++.||+|+++... ....+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 47899999987542 22334455666676654 899999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++.... .+++.++..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~ 154 (316)
T cd05592 81 GDLMFHIQSSG-RFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKAS 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Cccc
Confidence 99999997655 6889999999999999999999 9999999999999999999999999999997543222 2223
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...||+.|+|||.+.+..++.++||||+||++|||++|+.||...... ......... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-----~~~~~i~~~----------------~~ 213 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-----ELFDSILND----------------RP 213 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHcC----------------CC
Confidence 456899999999999888999999999999999999999999753211 111110000 00
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINAK-EIVA 800 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~-evl~ 800 (824)
..+..++..+.+++.+||..||++||++. ++.+
T Consensus 214 ~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 214 HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 01122455688999999999999999875 5544
No 128
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.2e-36 Score=324.49 Aligned_cols=269 Identities=20% Similarity=0.289 Sum_probs=202.3
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
.++|.+.+.||+|+||.||+|+.+ +++.||+|.++.... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 367889999999999999999865 578899999875432 233467789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|+++ +|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 85 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 159 (309)
T cd07872 85 YLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK- 159 (309)
T ss_pred CCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc-
Confidence 9975 898888776666889999999999999999999 99999999999999999999999999999875432221
Q ss_pred cccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCC-Cc-ch-------h
Q 040845 684 MTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLP-IS-TM-------E 753 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~-~~-------~ 753 (824)
......++..|+|||.+.+ ..++.++||||+||++|||+||+.||......+ ........... .. .. +
T Consensus 160 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07872 160 -TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHLIFRLLGTPTEETWPGISSNDE 237 (309)
T ss_pred -ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhhhcchhh
Confidence 1223457889999998765 457999999999999999999999997532211 11111110000 00 00 0
Q ss_pred hccccccCc-hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 754 VVDANLLSQ-EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 754 ~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
..+...... ..........++.++.+++.+|++.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 000000000 000001112356678999999999999999999999874
No 129
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=5e-37 Score=324.01 Aligned_cols=262 Identities=26% Similarity=0.420 Sum_probs=205.6
Q ss_pred hhccCCCCceeeeccceEEEEEEECC------CcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCe
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIRD------GMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEF 597 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 597 (824)
..++|++.+.||+|+||.||+|..++ +..||+|.+..... .....+.+|+.+++.++|+||+++++++.+...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 46789999999999999999997542 45899998764322 233457789999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhhCC---------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 040845 598 KALVLEYMPHGSLEKYLHSSN---------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 668 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 668 (824)
.++||||+++|+|.+++.... ...++..+..++.|++.|++||| +++|+||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEE
Confidence 999999999999999997532 23466788899999999999999 999999999999999999999999
Q ss_pred eecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhC
Q 040845 669 SDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCL 747 (824)
Q Consensus 669 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 747 (824)
+|||+++...............++..|+|||.+.++.++.++|||||||++|||++ |..||...... ++.....
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-----~~~~~~~ 235 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-----QVLKFVM 235 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHH
Confidence 99999986543332222222345678999999988889999999999999999999 77887652211 1111100
Q ss_pred CCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 040845 748 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSL 809 (824)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 809 (824)
+... ...+..++..+.+++.+||+.||++|||+.|+++.+++....+
T Consensus 236 --------~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~ 282 (288)
T cd05061 236 --------DGGY-------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPS 282 (288)
T ss_pred --------cCCC-------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCC
Confidence 0000 0011234567999999999999999999999999998865433
No 130
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1e-36 Score=329.36 Aligned_cols=260 Identities=25% Similarity=0.417 Sum_probs=202.9
Q ss_pred hccCCCCceeeeccceEEEEEEE------CCCcEEEEEEeecccc-chhhhHHHHHHHHhcC-CCCcceeEEeeeecC-C
Q 040845 526 TDKFSENNLIGRGGFGSVYKARI------RDGMEVAVKVFNLQCG-RAFKSFDVECAMMKSI-RHRNLVKVISSCSNE-E 596 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~ 596 (824)
.++|++.+.||+|+||.||+|.+ .+++.||||+++.... .....+.+|+.++.++ +|+||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35799999999999999999974 2468899999875432 2345678899999999 689999999988654 4
Q ss_pred eeEEEEeccCCCCHHHHhhhCC----------------------------------------------------------
Q 040845 597 FKALVLEYMPHGSLEKYLHSSN---------------------------------------------------------- 618 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 618 (824)
..++||||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 6789999999999999986421
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccccccc
Q 040845 619 --------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTL 690 (824)
Q Consensus 619 --------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 690 (824)
..+++.++..++.|+++|++||| +.+|+||||||+||++++++.+||+|||++................
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 13577888999999999999999 9999999999999999999999999999998654332222222334
Q ss_pred ccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhh
Q 040845 691 ATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVA 769 (824)
Q Consensus 691 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (824)
++..|+|||.+.+..++.++||||||+++|||++ |..||....... .....+.... ....
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~------------------~~~~ 303 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGT------------------RMRA 303 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HHHHHHhccC------------------CCCC
Confidence 5678999999988889999999999999999997 888886532211 1111000000 0001
Q ss_pred HHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 040845 770 KEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRD 807 (824)
Q Consensus 770 ~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 807 (824)
+..+++.+.+++.+||+.||++|||+.|++++|+.+.+
T Consensus 304 ~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 304 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11234568999999999999999999999999998865
No 131
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=7.6e-37 Score=323.08 Aligned_cols=257 Identities=25% Similarity=0.420 Sum_probs=205.5
Q ss_pred cCCCCceeeeccceEEEEEEEC------CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 528 KFSENNLIGRGGFGSVYKARIR------DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
+|++.+.||+|+||.||+|... ....||+|.+..... .....+..|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999753 235789998865432 334678889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCC
Q 040845 601 VLEYMPHGSLEKYLHSSN-----------------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSN 657 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~N 657 (824)
|+||+.+++|.+++.... ..+++.+++.++.|++.|++||| +.+++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhhe
Confidence 999999999999986421 24788999999999999999999 9999999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCc
Q 040845 658 VLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGE 736 (824)
Q Consensus 658 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~ 736 (824)
|++++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~- 236 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE- 236 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 9999999999999999986543332222233345778999999888889999999999999999999 98888653211
Q ss_pred chhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 040845 737 MTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRD 807 (824)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 807 (824)
....+..... ....+..++.++.+++.+||+.+|++||+++|+++.|+++..
T Consensus 237 -~~~~~~~~~~------------------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 237 -RLFNLLKTGY------------------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -HHHHHHhCCC------------------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 1111111100 011122345678999999999999999999999999998754
No 132
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3.1e-37 Score=330.50 Aligned_cols=242 Identities=22% Similarity=0.291 Sum_probs=195.3
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||.||+|+.+ +++.||||+++... ....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999875 47899999987542 23345567788888866 799999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........ ...
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~~~ 154 (321)
T cd05591 81 GDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV--TTT 154 (321)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc--ccc
Confidence 99999987655 6889999999999999999999 99999999999999999999999999999875432221 223
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ....... .. .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~-~~~~i~~----~~----------------~ 213 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD-LFESILH----DD----------------V 213 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH-HHHHHHc----CC----------------C
Confidence 3568999999999998899999999999999999999999997532111 1111100 00 0
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCC-------CHHHHHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRI-------NAKEIVAK 801 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rp-------t~~evl~~ 801 (824)
..+..++.++.+++.+||+.||++|| ++++++++
T Consensus 214 ~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 214 LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 01112355688999999999999999 88888866
No 133
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.2e-36 Score=322.93 Aligned_cols=258 Identities=24% Similarity=0.383 Sum_probs=206.0
Q ss_pred hccCCCCceeeeccceEEEEEEEC------CCcEEEEEEeeccc-cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR------DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEF 597 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 597 (824)
.++|.+.+.||+|+||.||+|.+. ++..||||+++... ....+.+.+|+++++++ +|+||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 357889999999999999999742 24579999886542 23346788999999999 79999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 040845 598 KALVLEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 676 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 676 (824)
.++||||+.+|+|.+++.... ..+++.++..++.|++.|++||| +.+|+|+||||+||+++.++.++++|||++..
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence 999999999999999997644 34899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhc
Q 040845 677 LTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVV 755 (824)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (824)
..............++..|+|||.+.+..++.++||||+||++|||++ |..||......+ ..........+
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~~~~~~~~------- 262 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYKLIKEGYR------- 262 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHHHHHcCCc-------
Confidence 643322222222345778999999998899999999999999999998 899986533221 11111110000
Q ss_pred cccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 756 DANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
...+...+..+.+++.+||..+|++|||+.|+++.|+++
T Consensus 263 -----------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 263 -----------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -----------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 001112345689999999999999999999999999874
No 134
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.4e-36 Score=318.21 Aligned_cols=254 Identities=26% Similarity=0.455 Sum_probs=201.8
Q ss_pred CCCCceeeeccceEEEEEEECC----CcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecCCe-----
Q 040845 529 FSENNLIGRGGFGSVYKARIRD----GMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEF----- 597 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 597 (824)
|.+.+.||+|+||.||+|.... +..||+|.++.... ...+.+..|++.++.++|+||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678899999999999998642 36799999875422 234578889999999999999999998865543
Q ss_pred -eEEEEeccCCCCHHHHhhhCC-----CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeec
Q 040845 598 -KALVLEYMPHGSLEKYLHSSN-----YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDF 671 (824)
Q Consensus 598 -~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 671 (824)
.++|+||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 789999999999999985432 46889999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCc
Q 040845 672 GIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPIS 750 (824)
Q Consensus 672 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 750 (824)
|+++................+..|+|||.+.+..++.++|||||||++|||++ |..||...... ....+.....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~--- 232 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYLRHGN--- 232 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC---
Confidence 99987654433222223345678999999988889999999999999999999 88888653211 1111111000
Q ss_pred chhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 751 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
....+..++..+.+++.+||+.||.+|||+.|++++|+++
T Consensus 233 ---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 233 ---------------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ---------------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0011234567799999999999999999999999999875
No 135
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1e-36 Score=325.70 Aligned_cols=267 Identities=26% Similarity=0.420 Sum_probs=211.0
Q ss_pred hccCCCCceeeeccceEEEEEEEC--------CCcEEEEEEeeccc-cchhhhHHHHHHHHhcC-CCCcceeEEeeeecC
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR--------DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNE 595 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 595 (824)
.++|.+.+.||+|+||.||+|+.. .+..||+|.++... ......+..|+.+++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 357888999999999999999752 24579999886442 23456688899999999 699999999999998
Q ss_pred CeeEEEEeccCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee
Q 040845 596 EFKALVLEYMPHGSLEKYLHSSN---------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 660 (824)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 660 (824)
...++||||+++|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEE
Confidence 99999999999999999996532 34788999999999999999999 9999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchh
Q 040845 661 DDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTL 739 (824)
Q Consensus 661 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~ 739 (824)
+.++.+||+|||.++...............++..|+|||.+.++.++.++||||||+++|||++ |..||...... ..
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--~~ 245 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE--EL 245 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH--HH
Confidence 9999999999999986643222221222234567999999988889999999999999999999 88887652211 11
Q ss_pred hhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhccccCC
Q 040845 740 KHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSLLRNVGG 815 (824)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~~~ 815 (824)
....... .....+..++.++.+++.+||+.+|++|||+.|+++.|+++......++..
T Consensus 246 ~~~~~~~------------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~ 303 (314)
T cd05099 246 FKLLREG------------------HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEEYLD 303 (314)
T ss_pred HHHHHcC------------------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcCCcee
Confidence 1111100 000112345667889999999999999999999999999998776666553
No 136
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.5e-37 Score=329.88 Aligned_cols=248 Identities=22% Similarity=0.294 Sum_probs=195.5
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||.||+|+.+ +++.||+|+++... ......+..|+.++.++ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999999999865 57899999987542 23345577888888777 799999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTS 154 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--Cccc
Confidence 99999887654 6899999999999999999999 9999999999999999999999999999987532211 1223
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCc---chhhhhhhhhCCCcchhhccccccCchh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGE---MTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+...... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~-------~~------- 220 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-------EK------- 220 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHh-------cC-------
Confidence 3568999999999999999999999999999999999999996422111 111111111000 00
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCCC------HHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRIN------AKEIVAK 801 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt------~~evl~~ 801 (824)
....+..++..+.+++.+||+.||++||+ +.|++++
T Consensus 221 -~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 221 -QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred -CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 00112234567889999999999999998 4677655
No 137
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.1e-36 Score=322.94 Aligned_cols=260 Identities=25% Similarity=0.437 Sum_probs=205.8
Q ss_pred ccCCCCceeeeccceEEEEEEECC-C--cEEEEEEeeccc-cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD-G--MEVAVKVFNLQC-GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~-~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 601 (824)
++|++.+.||+|+||.||+|..++ + ..+|+|.++... ....+.+..|++++.++ +||||+++++++.+....++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 578899999999999999998654 3 347888876432 23456788899999999 799999999999999999999
Q ss_pred EeccCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcE
Q 040845 602 LEYMPHGSLEKYLHSSN---------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVA 666 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 666 (824)
+||+++++|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeE
Confidence 99999999999997532 24788899999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhh
Q 040845 667 HLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVND 745 (824)
Q Consensus 667 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 745 (824)
||+|||++..... .........+..|+|||......++.++|||||||++|||++ |..||......+ ....
T Consensus 159 kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-----~~~~ 230 (297)
T cd05089 159 KIADFGLSRGEEV---YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-----LYEK 230 (297)
T ss_pred EECCcCCCccccc---eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHH
Confidence 9999999864321 111111223567999999988889999999999999999998 999986532111 1111
Q ss_pred hCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhccc
Q 040845 746 CLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSLLRN 812 (824)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 812 (824)
... . .....+..++..+.+++.+||..+|.+|||+.++++.|+++.+.....
T Consensus 231 ~~~---------~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~~ 282 (297)
T cd05089 231 LPQ---------G------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKAY 282 (297)
T ss_pred Hhc---------C------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccc
Confidence 000 0 000112235677899999999999999999999999999998766443
No 138
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=327.79 Aligned_cols=244 Identities=29% Similarity=0.444 Sum_probs=204.5
Q ss_pred eeeeccceEEEEEEECC-CcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCHHH
Q 040845 534 LIGRGGFGSVYKARIRD-GMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSLEK 612 (824)
Q Consensus 534 ~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 612 (824)
+||+|.||+||.|++.+ ...+|||-+.....+..+-+.+|+.+-+.++|.|||+++|.+.+.++.-+.||-++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 79999999999998664 66789999877767777888999999999999999999999999999999999999999999
Q ss_pred HhhhCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC-CCCcEEEeecccccccCCCCCccccccc
Q 040845 613 YLHSSNYSL--DIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSMTQTQT 689 (824)
Q Consensus 613 ~l~~~~~~~--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 689 (824)
.++..=.++ .+.++-.+.+||++||.||| +..|||||||.+|||+. -.|.+||+|||-++.+.+-. ......
T Consensus 662 LLrskWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin--P~TETF 736 (1226)
T KOG4279|consen 662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN--PCTETF 736 (1226)
T ss_pred HHHhccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCC--cccccc
Confidence 997654445 67788889999999999999 99999999999999995 68999999999999875332 223345
Q ss_pred cccccccCccCcCCC--CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 690 LATIGYMAPEYGREG--QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 690 ~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
.||..|||||++..+ .|+.++|||||||.+.||.||++||.+...+.-. ++.. +....+.
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA---------------MFkV---GmyKvHP 798 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA---------------MFKV---GMYKVHP 798 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh---------------hhhh---cceecCC
Confidence 699999999999765 4899999999999999999999999874332211 1111 1111234
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINAKEIVA 800 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 800 (824)
+.|+..+.++..++.+|+.+||.+||+|+++++
T Consensus 799 ~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 799 PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 456778889999999999999999999999875
No 139
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=5.4e-37 Score=334.25 Aligned_cols=253 Identities=22% Similarity=0.288 Sum_probs=201.3
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.++...++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 467999999999999999999865 58899999986432 22334577899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||+++|+|.+++... .++...+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 122 ~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~ 196 (370)
T cd05596 122 MEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG 196 (370)
T ss_pred EcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999998764 4778888899999999999999 9999999999999999999999999999998654322
Q ss_pred CccccccccccccccCccCcCCC----CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 682 QSMTQTQTLATIGYMAPEYGREG----QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
. .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..........
T Consensus 197 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-~~~~~i~~~~----------- 263 (370)
T cd05596 197 M-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKIMDHK----------- 263 (370)
T ss_pred c-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH-HHHHHHHcCC-----------
Confidence 1 122345689999999987643 4789999999999999999999998752211 1111111000
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQ--RINAKEIVAK 801 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~ 801 (824)
.....+....++..+.+++.+|++.+|.+ |+++.|++++
T Consensus 264 -----~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 264 -----NSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred -----CcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 00001111134667899999999999998 9999999877
No 140
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=5.6e-37 Score=329.40 Aligned_cols=248 Identities=21% Similarity=0.284 Sum_probs=196.5
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
++||+|+||.||+|+.+ +++.||+|+++... ....+.+..|..+++.+ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999865 58899999997542 23345677899999988 799999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--DTTS 154 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCC--Cccc
Confidence 99999987654 7899999999999999999999 9999999999999999999999999999987432111 1223
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCc---chhhhhhhhhCCCcchhhccccccCchh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGE---MTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
...||+.|+|||++.+..++.++||||+||++|||++|+.||+.....+ .....+...... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-------~~------- 220 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVIL-------EK------- 220 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHH-------cC-------
Confidence 3568999999999999899999999999999999999999996422111 111111111000 00
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCCC------HHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRIN------AKEIVAK 801 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt------~~evl~~ 801 (824)
....+..++..+.+++.+|++.||++||+ ++|++++
T Consensus 221 -~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 221 -QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred -CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 00112234567899999999999999997 6777755
No 141
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.2e-37 Score=327.67 Aligned_cols=241 Identities=22% Similarity=0.293 Sum_probs=191.9
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||.||+|+.+ +|+.||+|+++... ....+....|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999876 58899999987542 23345566777777754 899999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++.... .+++.++..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++....... ....
T Consensus 81 g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (316)
T cd05620 81 GDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--NRAS 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC--Ccee
Confidence 99999987654 6889999999999999999999 9999999999999999999999999999987432111 1223
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.... +
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--~~~~~~~~~~---------~---------- 213 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--ELFESIRVDT---------P---------- 213 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCC---------C----------
Confidence 456899999999999989999999999999999999999999653211 1111110000 0
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINAK-EIVA 800 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~-evl~ 800 (824)
..+..++.++.+++.+||..||++||++. ++.+
T Consensus 214 ~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 214 HYPRWITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 00112355688999999999999999985 5553
No 142
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=323.90 Aligned_cols=252 Identities=25% Similarity=0.330 Sum_probs=211.8
Q ss_pred hhccCCCCceeeeccceEEEEEEECC-CcEEEEEEeecccc---chhhhHHHHHHHHhcCC-CCcceeEEeeeecCCeeE
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQCG---RAFKSFDVECAMMKSIR-HRNLVKVISSCSNEEFKA 599 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 599 (824)
....|++.+.||+|.||.||+++.+. |+.+|+|++.+... ...+.+.+|+++|+++. |||||.++++|++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 34678889999999999999998765 99999999976543 24568999999999998 999999999999999999
Q ss_pred EEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC----CCcEEEeeccccc
Q 040845 600 LVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD----NMVAHLSDFGIAK 675 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~----~~~~kl~Dfg~a~ 675 (824)
+|||+++||.|.+.+... .+++..+..++.|++.+++||| +.+|+|||+||+|+|+.. ++.+|++|||+|.
T Consensus 113 lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 999999999999999776 3899999999999999999999 999999999999999963 3579999999999
Q ss_pred ccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhc
Q 040845 676 LLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVV 755 (824)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (824)
.... .......+||+.|+|||++....|+..+||||+||++|.|++|.+||.+....+... ......+
T Consensus 188 ~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-~i~~~~~-------- 255 (382)
T KOG0032|consen 188 FIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-AILRGDF-------- 255 (382)
T ss_pred EccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-HHHcCCC--------
Confidence 8754 334456789999999999999999999999999999999999999998743322211 1111111
Q ss_pred cccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 756 DANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
..........+..+.++++.|+..||.+|+|+.++++|
T Consensus 256 --------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 256 --------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred --------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11112233557789999999999999999999999997
No 143
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.2e-36 Score=316.34 Aligned_cols=253 Identities=28% Similarity=0.458 Sum_probs=204.0
Q ss_pred hccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.++|++.+.||+|+||.||+|..+++..||+|.+.... ...+++.+|+.++++++|++++++++++.+ ...+++|||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEec
Confidence 35788999999999999999998888899999987543 234678899999999999999999998854 5678999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 606 PHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 606 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
++++|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.++|+|||.+..+......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~- 158 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT- 158 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc-
Confidence 9999999997643 45899999999999999999999 999999999999999999999999999999865432221
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
......++..|+|||...+..++.++||||||+++|||++ |..||...... ..........
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~---------------- 220 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQVERGY---------------- 220 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCC----------------
Confidence 1122335678999999988889999999999999999999 88888653211 1111111000
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
....+..++..+.+++.+||..+|++|||++++.+.|++
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 221 --RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 001122345679999999999999999999999998875
No 144
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=7.3e-37 Score=326.33 Aligned_cols=241 Identities=23% Similarity=0.332 Sum_probs=191.9
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||+||+|+.. +++.||||+++... ....+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999875 47899999987542 23344566677787764 899999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++.... .+++.++..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (316)
T cd05619 81 GDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--AKTC 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--Ccee
Confidence 99999997654 6889999999999999999999 9999999999999999999999999999987532211 1223
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...||..|+|||++.+..++.++||||+||++|||++|+.||...... .....+... .+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~~i~~~---------~~---------- 213 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--ELFQSIRMD---------NP---------- 213 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhC---------CC----------
Confidence 356899999999999888999999999999999999999999753211 111111100 00
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINAK-EIVA 800 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~-evl~ 800 (824)
..+..++..+.+++.+||..||++||++. ++.+
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 214 CYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred CCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 00112345688999999999999999997 5544
No 145
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.9e-36 Score=314.86 Aligned_cols=254 Identities=27% Similarity=0.454 Sum_probs=203.9
Q ss_pred hccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.++|++.+.||+|+||.||+|++.++..||+|.++.. ....+.+.+|++++++++|+||+++++++.+ ...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccC-ccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 3568999999999999999999877778999998743 2334678899999999999999999998754 5578999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 606 PHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 606 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
++|+|.+++.... ..+++..+..++.|++.|++|+| +.+++||||||+||++++++.++|+|||.+..+......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~- 158 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT- 158 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeeccccccc-
Confidence 9999999997643 45789999999999999999999 999999999999999999999999999999766433221
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
......++..|+|||...+..++.++||||||+++||++| |..||......+. .... ...
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~-~~~~-------------~~~----- 219 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-LDQV-------------ERG----- 219 (262)
T ss_pred cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH-HHHH-------------hcC-----
Confidence 1223346778999999988889999999999999999999 7778765322111 0000 000
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
.....+..++..+.+++.+||+.+|++||+++++.+.|++.
T Consensus 220 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 220 -YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 00011123566789999999999999999999999999875
No 146
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.1e-37 Score=322.77 Aligned_cols=255 Identities=25% Similarity=0.421 Sum_probs=203.2
Q ss_pred ccCCCCceeeeccceEEEEEEECC------CcEEEEEEeeccccc-hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD------GMEVAVKVFNLQCGR-AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKA 599 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 599 (824)
.+|.+.+.||+|+||.||+|++.+ +..||+|+++..... ..+.+.+|+.+++.++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 346777899999999999998632 478999998754332 3466888999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhhC---------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC
Q 040845 600 LVLEYMPHGSLEKYLHSS---------------NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM 664 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 664 (824)
+++||+++++|.+++... ...+++..+..++.|++.|++|+| +++|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCC
Confidence 999999999999998532 124788889999999999999999 99999999999999999999
Q ss_pred cEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhh
Q 040845 665 VAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWV 743 (824)
Q Consensus 665 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 743 (824)
.+||+|||+++...............+++.|+|||.+.++.++.++||||+||++|||++ |..||.+... ..+.
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~ 236 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QDVI 236 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHH
Confidence 999999999886543332222233446788999999988889999999999999999998 7778765221 1111
Q ss_pred hhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 744 NDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
....... ....+..++..+.+++.+||+.+|++||+++++++.|+.
T Consensus 237 ~~i~~~~---------------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 237 EMIRNRQ---------------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHcCC---------------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111000 001123567779999999999999999999999999864
No 147
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.3e-36 Score=318.38 Aligned_cols=254 Identities=26% Similarity=0.436 Sum_probs=198.3
Q ss_pred CCCCceeeeccceEEEEEEECC-Cc--EEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecC------Ce
Q 040845 529 FSENNLIGRGGFGSVYKARIRD-GM--EVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNE------EF 597 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 597 (824)
|.+.+.||+|+||.||+|++.+ +. .||+|.++... ....+.+..|+++++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567899999999999998764 32 68999876542 33456788899999999999999999987432 25
Q ss_pred eEEEEeccCCCCHHHHhhhC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecc
Q 040845 598 KALVLEYMPHGSLEKYLHSS-----NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 672 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 672 (824)
.+++|||+++|+|.+++... ...+++..+..++.|++.|++||| +++|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCC
Confidence 68999999999999987432 235789999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcc
Q 040845 673 IAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPIST 751 (824)
Q Consensus 673 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 751 (824)
++................+++.|+|||...+..++.++||||||+++|||++ |+.||...... .....+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~---- 231 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLRQGN---- 231 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcCC----
Confidence 9987643332222223346778999999998889999999999999999999 78888652211 1111111000
Q ss_pred hhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 752 MEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
....+..++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 232 --------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 --------------RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred --------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0001123456789999999999999999999999999874
No 148
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=9e-37 Score=318.88 Aligned_cols=256 Identities=23% Similarity=0.445 Sum_probs=205.6
Q ss_pred ccCCCCceeeeccceEEEEEEECC-C---cEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD-G---MEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
..|++.+.||+|+||.||+|.++. + ..||||++.... ......+..|+.+++.++||||+++++++.++...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 457788999999999999998653 3 369999986542 33456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||+++++|.+++......+++.+++.++.|++.|++||| +.+++|+||||+||+++.++.+|++|||.+.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 9999999999999876667899999999999999999999 9999999999999999999999999999987654332
Q ss_pred Ccccccc---ccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 682 QSMTQTQ---TLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 682 ~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
....... ...+..|+|||.+.+..++.++||||+||++||+++ |..||...... ....++....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i~~~~---------- 228 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAIEQDY---------- 228 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHHHcCC----------
Confidence 2211111 112457999999998899999999999999999987 99998653211 1122211100
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
....+..++..+.+++.+||..+|++||++.++++.|+++
T Consensus 229 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 --------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111234567789999999999999999999999998764
No 149
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.3e-36 Score=315.09 Aligned_cols=247 Identities=25% Similarity=0.441 Sum_probs=197.7
Q ss_pred eeeccceEEEEEEEC---CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCH
Q 040845 535 IGRGGFGSVYKARIR---DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSL 610 (824)
Q Consensus 535 lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 610 (824)
||+|+||.||+|.+. ++..||+|++..... ...+.+.+|+.++++++|+||+++++++.. ...++||||+++++|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCH
Confidence 899999999999764 356799999865532 234668899999999999999999998864 567899999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc-ccccc
Q 040845 611 EKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM-TQTQT 689 (824)
Q Consensus 611 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~ 689 (824)
.+++......+++.++..++.|++.|++||| +.+++||||||+||+++.++.+|++|||++.......... .....
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9999866667899999999999999999999 9999999999999999999999999999998654332221 11222
Q ss_pred cccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhh
Q 040845 690 LATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFV 768 (824)
Q Consensus 690 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (824)
.++..|+|||.+....++.++|||||||++||+++ |..||......+ ....+.... ...
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~------------------~~~ 218 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE--VMSFIEQGK------------------RLD 218 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHHCCC------------------CCC
Confidence 34678999999888889999999999999999996 999987632211 111111100 011
Q ss_pred hHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 769 AKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 769 ~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
.+..++.++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 219 ~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 219 CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1234567899999999999999999999999999865
No 150
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5.8e-37 Score=336.69 Aligned_cols=252 Identities=22% Similarity=0.290 Sum_probs=196.8
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
.|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++|+||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788999999999999999864 58899999987542 2334568889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC-
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ- 682 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 682 (824)
|+++|+|.+++.+.+ .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+|..+.....
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 82 YIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 999999999997654 6788899999999999999999 99999999999999999999999999999754321000
Q ss_pred --------------------------------------------ccccccccccccccCccCcCCCCCCccchHHHHHHH
Q 040845 683 --------------------------------------------SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIM 718 (824)
Q Consensus 683 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~ 718 (824)
........||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 000112468999999999998899999999999999
Q ss_pred HHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCC---H
Q 040845 719 LMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRIN---A 795 (824)
Q Consensus 719 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt---~ 795 (824)
+|||++|+.||......+. ....... . .....+.....++++.+++.+|+ .+|++|++ +
T Consensus 238 l~elltG~~Pf~~~~~~~~-~~~i~~~--~--------------~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~ 299 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLET-QMKVINW--Q--------------TSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGA 299 (382)
T ss_pred HHHHHhCCCCCCCCCHHHH-HHHHHcc--C--------------CCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCH
Confidence 9999999999975322111 1111000 0 00000011123456778888876 59999997 8
Q ss_pred HHHHHH
Q 040845 796 KEIVAK 801 (824)
Q Consensus 796 ~evl~~ 801 (824)
.|+++|
T Consensus 300 ~ei~~h 305 (382)
T cd05625 300 DEIKAH 305 (382)
T ss_pred HHHhcC
Confidence 888765
No 151
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2e-36 Score=315.20 Aligned_cols=252 Identities=25% Similarity=0.358 Sum_probs=202.9
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-----chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-----RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
++|+..+.||+|++|.||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57889999999999999999864 589999999864321 123567889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
|+||+++++|.+++.... .+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||++......
T Consensus 82 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 999999999999997655 6788899999999999999999 999999999999999999999999999998765332
Q ss_pred CCccc-cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 681 DQSMT-QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 681 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
..... .....++..|+|||.+.+..++.++||||+|+++||+++|+.||....... ....... . .
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~---~-~--------- 223 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA-AIFKIAT---Q-P--------- 223 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH-HHHHHhc---c-C---------
Confidence 21111 123457789999999998889999999999999999999999986531111 0000000 0 0
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....+..++..+.+++.+||..+|.+|||+.|++++
T Consensus 224 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 224 -----TNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -----CCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 0011122345678999999999999999999999875
No 152
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.3e-37 Score=338.06 Aligned_cols=252 Identities=22% Similarity=0.280 Sum_probs=198.6
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
+|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+++++.++|+||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6889999999999999999865 58999999986432 2234567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC-
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ- 682 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 682 (824)
|+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+|..+.....
T Consensus 82 ~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 82 YIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 999999999997765 6788889999999999999999 99999999999999999999999999999853311000
Q ss_pred ----------------------------------------ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHH
Q 040845 683 ----------------------------------------SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMET 722 (824)
Q Consensus 683 ----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el 722 (824)
........||+.|+|||++.+..++.++||||+||++|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 0001134689999999999988999999999999999999
Q ss_pred HhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCC---CHHHHH
Q 040845 723 FTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRI---NAKEIV 799 (824)
Q Consensus 723 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp---t~~evl 799 (824)
++|+.||......+.. ... .... ..........++..+.+++.+|+ .+|++|+ ++.|++
T Consensus 238 l~G~~Pf~~~~~~~~~-~~i----~~~~------------~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell 299 (376)
T cd05598 238 LVGQPPFLADTPAETQ-LKV----INWE------------TTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIK 299 (376)
T ss_pred hhCCCCCCCCCHHHHH-HHH----hccC------------ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHh
Confidence 9999999763221110 000 0000 00000011123556778888876 4999999 899998
Q ss_pred HH
Q 040845 800 AK 801 (824)
Q Consensus 800 ~~ 801 (824)
++
T Consensus 300 ~h 301 (376)
T cd05598 300 AH 301 (376)
T ss_pred CC
Confidence 87
No 153
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=6.5e-37 Score=327.39 Aligned_cols=242 Identities=22% Similarity=0.280 Sum_probs=195.6
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||+||+|+.+ +++.||||+++... ......+..|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999875 47899999997542 23345667788898888 699999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||++++++.+||+|||++........ ...
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~ 154 (318)
T cd05570 81 GDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV--TTS 154 (318)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC--ccc
Confidence 99999987665 6899999999999999999999 99999999999999999999999999999875322211 122
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...|++.|+|||++.+..++.++||||+||++|||++|+.||...... .......... .
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-----~~~~~i~~~~----------------~ 213 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED-----ELFQSILEDE----------------V 213 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH-----HHHHHHHcCC----------------C
Confidence 345899999999999999999999999999999999999999753211 1111100000 0
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCH-----HHHHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINA-----KEIVAK 801 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~-----~evl~~ 801 (824)
..+..++..+.+++.+||..||.+||++ .+++++
T Consensus 214 ~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 214 RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 0112345678999999999999999999 887765
No 154
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-39 Score=306.70 Aligned_cols=249 Identities=26% Similarity=0.380 Sum_probs=214.0
Q ss_pred CCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 529 FSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
|++..+||+|+||.||+|.++ +|+.||||.+..+ ...+.+..|+.+|++.+.+++|+++|.+......++|||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 566789999999999999765 5999999988654 4567888999999999999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+..+.++..++.+++.++..+++..+.||+||| ..+-+|||||+.|||+..+|.+|++|||.|..+.+ ......
T Consensus 113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD--TMAKRN 187 (502)
T KOG0574|consen 113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD--TMAKRN 187 (502)
T ss_pred CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhh--hHHhhC
Confidence 9999999988889999999999999999999999 88999999999999999999999999999987643 223345
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
.++||+.|||||++..-.|..++||||+|+...||..|++||.+..+..- ..++ -..+...+
T Consensus 188 TVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA--------------IFMI----PT~PPPTF 249 (502)
T KOG0574|consen 188 TVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA--------------IFMI----PTKPPPTF 249 (502)
T ss_pred ccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce--------------eEec----cCCCCCCC
Confidence 57899999999999999999999999999999999999999987543210 0000 01122334
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
..|+..+.++-+++++|+...|++|-||.++++|-
T Consensus 250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence 45677889999999999999999999999998863
No 155
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.6e-36 Score=318.59 Aligned_cols=245 Identities=24% Similarity=0.317 Sum_probs=195.2
Q ss_pred eeeccceEEEEEEEC-CCcEEEEEEeecccc---chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCH
Q 040845 535 IGRGGFGSVYKARIR-DGMEVAVKVFNLQCG---RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSL 610 (824)
Q Consensus 535 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 610 (824)
||+|+||+||+|... +++.||+|.+..... ...+.+..|+.+++.++|+||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999865 588999999864321 2335667899999999999999999999999999999999999999
Q ss_pred HHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 611 EKYLHS---SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 611 ~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
.+++.. ....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++..+..... ...
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--ccc
Confidence 988753 2246899999999999999999999 99999999999999999999999999999976543222 122
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...|++.|+|||.+.+..++.++|||||||++|||++|+.||....... ........... . ..
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~--------~--------~~ 218 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRILN--------D--------SV 218 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhcc--------c--------CC
Confidence 3468999999999999999999999999999999999999987532111 01111110000 0 00
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
..+..++..+.+++.+||+.||++|| ++++++++
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 219 TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 11223566789999999999999999 77777765
No 156
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.1e-36 Score=314.39 Aligned_cols=253 Identities=25% Similarity=0.440 Sum_probs=205.1
Q ss_pred hccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.++|++.++||+|+||.||+|..++++.||+|.+.... ...+.+.+|+.++++++|+||+++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 46788999999999999999998889999999986443 34567889999999999999999999874 45689999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 606 PHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 606 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
++++|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.++++|||.+........ .
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~ 158 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY-T 158 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc-c
Confidence 9999999986533 56889999999999999999999 99999999999999999999999999999976542221 1
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
......++..|+|||++....++.++||||||+++||+++ |+.||......+ .........
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~---------------- 220 (260)
T cd05067 159 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE--VIQNLERGY---------------- 220 (260)
T ss_pred cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH--HHHHHHcCC----------------
Confidence 2223345678999999988889999999999999999999 999987532211 111110000
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
....+..++.++.+++.+||+.+|++|||++++++.|+.
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 221 --RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred --CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 001112345679999999999999999999999999875
No 157
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=6.9e-37 Score=332.87 Aligned_cols=254 Identities=22% Similarity=0.288 Sum_probs=199.9
Q ss_pred hhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
..++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3578999999999999999999875 48899999986432 2234557789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
||||+++|+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+|......
T Consensus 121 v~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 99999999999999754 4788899999999999999999 999999999999999999999999999999876422
Q ss_pred CCccccccccccccccCccCcCCC----CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREG----QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVD 756 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (824)
.. .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+.....
T Consensus 196 ~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~-~~~~~i~~~~~--------- 264 (370)
T cd05621 196 GM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV-GTYSKIMDHKN--------- 264 (370)
T ss_pred Cc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCc---------
Confidence 21 122345699999999988653 3788999999999999999999999753211 11111111000
Q ss_pred ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 040845 757 ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQ--RINAKEIVAK 801 (824)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~ 801 (824)
....+.....+..+.+++.+|+..+|.+ |+++.|++++
T Consensus 265 -------~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 265 -------SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -------ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0000111123556788999999866544 8999999987
No 158
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.6e-36 Score=319.40 Aligned_cols=251 Identities=24% Similarity=0.346 Sum_probs=201.6
Q ss_pred CCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 529 FSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
|++.+.||+|+||.||+|... ++..+|+|.+........+.+..|+++++.++|||++++++++..+...++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 567788999999999999875 4788999998655445567788899999999999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
++|.+++......+++..+..++.|++.||+||| +.+++||||||+||+++.++.+|++|||++....... ....
T Consensus 87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~~~ 161 (282)
T cd06643 87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QRRD 161 (282)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccccccccc--cccc
Confidence 9999988765567899999999999999999999 9999999999999999999999999999987643221 1223
Q ss_pred cccccccccCccCcC-----CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 688 QTLATIGYMAPEYGR-----EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
...++..|+|||++. ...++.++||||+||++|||++|+.||......+ ..........+
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~~-------------- 226 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSEPP-------------- 226 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhhcCCC--------------
Confidence 345889999999874 3457889999999999999999999987532111 11111110000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
....+..++..+.+++.+||+.||++||++.+++++-
T Consensus 227 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 227 ---TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred ---CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence 0011223456789999999999999999999987653
No 159
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.1e-36 Score=313.68 Aligned_cols=247 Identities=24% Similarity=0.398 Sum_probs=197.7
Q ss_pred eeeeccceEEEEEEEC---CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCC
Q 040845 534 LIGRGGFGSVYKARIR---DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHG 608 (824)
Q Consensus 534 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 608 (824)
.||+|+||.||+|.++ ++..||+|+++.... ...+.+..|+.+++.++|+||+++++++.. +..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 5899999999999753 478899999864432 235678889999999999999999998864 4678999999999
Q ss_pred CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc-ccc
Q 040845 609 SLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM-TQT 687 (824)
Q Consensus 609 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~ 687 (824)
+|.+++.... .+++..+..++.|++.|++||| +++|+||||||.||++++++.+||+|||++.......... ...
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 81 PLNKFLQKNK-HVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence 9999997654 6889999999999999999999 9999999999999999999999999999998764332211 112
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIH 766 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (824)
...++..|+|||.+....++.++|||||||++|||++ |..||...... .....+.... .
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~i~~~~------------------~ 216 (257)
T cd05116 157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQMIESGE------------------R 216 (257)
T ss_pred CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHCCC------------------C
Confidence 2234678999999988889999999999999999998 99998753221 1111111100 0
Q ss_pred hhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 767 FVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 767 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
...+..++..+.+++.+||+.||++||++++|++.|+++
T Consensus 217 ~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 217 MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 111224567789999999999999999999999999865
No 160
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.7e-36 Score=316.43 Aligned_cols=256 Identities=25% Similarity=0.459 Sum_probs=206.3
Q ss_pred ccCCCCceeeeccceEEEEEEEC----CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR----DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
.+|++.+.||+|+||.||+|++. .+..||+|.++... ....+.+..|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 57888999999999999999864 23479999886543 23356788899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||+++++|.+++......+++.++..++.|++.|++||| +.+++||||||+||+++.++.++++|||++..+....
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 9999999999999876667899999999999999999999 9999999999999999999999999999998764332
Q ss_pred Ccc-ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 682 QSM-TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 682 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
... ......++..|+|||.+.+..++.++|+||||+++||+++ |..||...... .....+....
T Consensus 161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~~------------ 226 (267)
T cd05066 161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIEEGY------------ 226 (267)
T ss_pred ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHhCCC------------
Confidence 211 1122234568999999998889999999999999999887 99998653221 1111111100
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
+...+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 227 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 227 ------RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ------cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0011123466789999999999999999999999999875
No 161
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.6e-36 Score=346.16 Aligned_cols=260 Identities=24% Similarity=0.333 Sum_probs=205.1
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc---chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG---RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999865 489999999865422 23457889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCC----------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecc
Q 040845 603 EYMPHGSLEKYLHSSN----------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 672 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 672 (824)
||+++|+|.+++.... ...++..++.++.|+++||+||| +.+|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999986421 23566788999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCC----------------ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCc
Q 040845 673 IAKLLTGEDQ----------------SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGE 736 (824)
Q Consensus 673 ~a~~~~~~~~----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~ 736 (824)
++........ ........||+.|+|||.+.+..++.++||||+||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986521110 001122468999999999999999999999999999999999999986522111
Q ss_pred chhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHHHH
Q 040845 737 MTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRI-NAKEIVAKLLKIRD 807 (824)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-t~~evl~~L~~~~~ 807 (824)
...... . .++. .......++..+.+++.+|+..||++|| +++++.+.|+...+
T Consensus 239 i~~~~~----i-------~~P~-------~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 ISYRDV----I-------LSPI-------EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhhhhh----c-------cChh-------hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 110000 0 0000 0001124566788999999999999996 67777888887755
No 162
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.2e-36 Score=322.24 Aligned_cols=261 Identities=25% Similarity=0.414 Sum_probs=201.5
Q ss_pred ccCCCCceeeeccceEEEEEEECC---------------CcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEe
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD---------------GMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVIS 590 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~ 590 (824)
++|++.+.||+|+||.||+|.... ...||+|.++... ....+.+.+|++++++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578999999999999999987532 2358999986542 233457889999999999999999999
Q ss_pred eeecCCeeEEEEeccCCCCHHHHhhhCC-----------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCee
Q 040845 591 SCSNEEFKALVLEYMPHGSLEKYLHSSN-----------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVL 659 (824)
Q Consensus 591 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nil 659 (824)
++......++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhEE
Confidence 9999999999999999999999986532 23678899999999999999999 999999999999999
Q ss_pred eCCCCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh--CCCCCcccccCcc
Q 040845 660 LDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT--RKKPTDELFNGEM 737 (824)
Q Consensus 660 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t--g~~p~~~~~~~~~ 737 (824)
+++++.+|++|||++................++..|+|||...++.++.++|||||||++|||++ |..||......+
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~- 240 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ- 240 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH-
Confidence 99999999999999986543332222233345778999999988889999999999999999998 556765432111
Q ss_pred hhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 738 TLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
........ .... ..... ...+..++..+.+++.+||..||++||++.+|++.|+
T Consensus 241 ~~~~~~~~-~~~~-----~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 VIENTGEF-FRNQ-----GRQIY------LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHh-hhhc-----ccccc------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 11111000 0000 00000 0011234567999999999999999999999999886
No 163
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.8e-36 Score=336.63 Aligned_cols=264 Identities=25% Similarity=0.340 Sum_probs=195.3
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecC--------C
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNE--------E 596 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------~ 596 (824)
..+|++.+.||+|+||.||+|... +++.||||++... .....+|+.+++.++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 467999999999999999999864 5899999987532 23345799999999999999999876321 2
Q ss_pred eeEEEEeccCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-cEEEeecc
Q 040845 597 FKALVLEYMPHGSLEKYLHS---SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFG 672 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~Dfg 672 (824)
..++||||+++ ++.+++.. ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 46799999964 78777653 3357889999999999999999999 99999999999999998654 79999999
Q ss_pred cccccCCCCCccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCc-
Q 040845 673 IAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIS- 750 (824)
Q Consensus 673 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~- 750 (824)
+|+.+..... .....+|+.|+|||++.+. .++.++||||+||++|||++|.+||.+.... ..+...+.......
T Consensus 217 la~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 217 SAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRIIQVLGTPTE 292 (440)
T ss_pred cchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCH
Confidence 9987643222 2234689999999987654 6899999999999999999999999763221 11111111111000
Q ss_pred -chhhcccc-------ccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 751 -TMEVVDAN-------LLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 751 -~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
......+. ...........+...+.++.+++.+||++||++|||+.|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 00000000 0011111222233456789999999999999999999999876
No 164
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=5.3e-36 Score=312.79 Aligned_cols=258 Identities=24% Similarity=0.342 Sum_probs=208.7
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+|++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999876 79999999886432 223567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 603 EYMPHGSLEKYLHSS---NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 603 e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
||+++++|.+++... ...+++.++..++.+++.|++||| +.+++||||+|+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998642 245789999999999999999999 99999999999999999999999999999876533
Q ss_pred CCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 680 EDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 680 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||.... .....+...... ..
T Consensus 159 ~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~---------~~ 224 (267)
T cd08224 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEK---------CD 224 (267)
T ss_pred CCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhhhc---------CC
Confidence 221 1223457889999999988889999999999999999999999986422 111111111000 00
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
.. ......++..+.+++.+||..+|++|||+.++++.+++++
T Consensus 225 ~~-----~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 225 YP-----PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CC-----CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 00 0011245667899999999999999999999999998874
No 165
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=8.8e-37 Score=327.31 Aligned_cols=247 Identities=21% Similarity=0.280 Sum_probs=196.8
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEE
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 602 (824)
+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+..|..++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999866 47899999987542 22334566688888777 5899999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||++++++.+||+|||++.......
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~- 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG- 155 (323)
T ss_pred cCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC-
Confidence 9999999999987655 6889999999999999999999 9999999999999999999999999999987542211
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||...... .....+.. ..
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--~~~~~i~~-----------~~---- 217 (323)
T cd05616 156 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQSIME-----------HN---- 217 (323)
T ss_pred -CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--HHHHHHHh-----------CC----
Confidence 1223456899999999999999999999999999999999999999753211 11111110 00
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCH-----HHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINA-----KEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~-----~evl~~ 801 (824)
...+...+.++.+++.+|++.||++|+++ .++.++
T Consensus 218 ----~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 218 ----VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred ----CCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 00112345668899999999999999984 566543
No 166
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.6e-36 Score=317.15 Aligned_cols=261 Identities=25% Similarity=0.403 Sum_probs=209.7
Q ss_pred ccCCCCceeeeccceEEEEEEECC-Cc----EEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD-GM----EVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~-~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
.+|++.+.||+|+||.||+|.+++ |+ .||+|....... .....+.+|+.++++++|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 568888999999999999998643 33 589998765533 334678889999999999999999999987 78889
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
||||+++|+|.+++......+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||.++.....
T Consensus 86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 99999999999999876667899999999999999999999 899999999999999999999999999999876533
Q ss_pred CCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
..........++..|+|||.+....++.++|+||||+++||+++ |+.||...... ...+.+....
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~------------ 228 (279)
T cd05057 163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIPDLLEKGE------------ 228 (279)
T ss_pred ccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhCCC------------
Confidence 33222222334678999999988889999999999999999999 99998763211 1111111100
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhcc
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSLLR 811 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 811 (824)
....+..++..+.+++.+||..+|.+||++.++++.|+++.+...|
T Consensus 229 ------~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~ 274 (279)
T cd05057 229 ------RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQR 274 (279)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCcc
Confidence 0111223455688999999999999999999999999998665544
No 167
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.5e-36 Score=313.09 Aligned_cols=250 Identities=27% Similarity=0.396 Sum_probs=207.1
Q ss_pred ccCCCCceeeeccceEEEEEEECC-CcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
++|+..+.||+|+||.||+|.+.+ ++.||+|.+..... .+.+.+|++++++++|+||+++++++.++...++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 578899999999999999998765 78999999875432 678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
++++|.+++......+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||++........ .
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--~ 155 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--K 155 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--c
Confidence 999999999876668899999999999999999999 99999999999999999999999999999987643221 2
Q ss_pred cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 686 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
.....++..|+|||++.+..++.++||||||+++|||++|+.||......+.... +.. ....
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~--~~~----------------~~~~ 217 (256)
T cd06612 156 RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM--IPN----------------KPPP 217 (256)
T ss_pred cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh--hcc----------------CCCC
Confidence 2234478899999999888899999999999999999999999875322211000 000 0000
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+..++..+.+++.+||+.||++|||+.|++++
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 218 TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 111223455678999999999999999999999864
No 168
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.8e-36 Score=315.39 Aligned_cols=257 Identities=26% Similarity=0.421 Sum_probs=206.8
Q ss_pred ccCCCCceeeeccceEEEEEEECC----CcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD----GMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
++|.+.+.||+|+||.||+|.+.+ ...||||...... ....+.+.+|+.+++.++||||+++++++.+ ...++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457888999999999999998643 2468999886554 3345678899999999999999999999875 456799
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||+++|+|.+++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||++.......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 9999999999999876657899999999999999999999 9999999999999999999999999999998664332
Q ss_pred CccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 682 QSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
. .......++..|+|||.+....++.++||||||+++||+++ |..||......+. ..+....
T Consensus 162 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~--~~~~~~~-------------- 224 (270)
T cd05056 162 Y-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV--IGRIENG-------------- 224 (270)
T ss_pred c-eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHcC--------------
Confidence 2 12223335568999999888889999999999999999986 9999865432211 1111000
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 040845 761 SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDS 808 (824)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 808 (824)
.....+..++..+.+++.+||..+|++|||+.++++.|+++.+.
T Consensus 225 ----~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 225 ----ERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ----CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00111234567899999999999999999999999999998653
No 169
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.7e-36 Score=315.14 Aligned_cols=257 Identities=25% Similarity=0.480 Sum_probs=205.9
Q ss_pred hccCCCCceeeeccceEEEEEEECC-C---cEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD-G---MEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
.++|+..+.||+|+||.||+|+.+. + ..||+|.++... ....+.+..|+++++.++|+|++++++++.+.+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 3567888999999999999998652 3 379999886542 2335678889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
||||+++++|.+++......+++.++..++.|++.|++||| +.+++||||||+||++++++.+|++|||++......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 99999999999999876567899999999999999999999 999999999999999999999999999999866432
Q ss_pred CCccc-cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhcccc
Q 040845 681 DQSMT-QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDAN 758 (824)
Q Consensus 681 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (824)
..... ......+..|+|||++....++.++|||||||++||+++ |+.||...... .....+...
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--~~~~~i~~~------------ 226 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--EVMKAINDG------------ 226 (268)
T ss_pred cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--HHHHHHhcC------------
Confidence 22111 112223567999999988889999999999999999998 99998653211 111111100
Q ss_pred ccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 759 LLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
.....+..++.++.+++.+||+.+|++||+++++++.|+++
T Consensus 227 ------~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 227 ------FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00111123566789999999999999999999999999875
No 170
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.2e-36 Score=312.27 Aligned_cols=247 Identities=29% Similarity=0.459 Sum_probs=199.5
Q ss_pred ceeeeccceEEEEEEECCCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCHH
Q 040845 533 NLIGRGGFGSVYKARIRDGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSLE 611 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 611 (824)
++||+|+||.||+|..++++.||+|.+..... .....+.+|+++++.++||||+++++++......++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988899999998865432 23456888999999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccc
Q 040845 612 KYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLA 691 (824)
Q Consensus 612 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 691 (824)
+++......+++..+..++.|++.|+.|+| +.+++||||+|+||+++.++.+|++|||++........ .......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~ 156 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-SSSGLKQI 156 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceecccccc-ccCCCCCC
Confidence 999776657899999999999999999999 99999999999999999999999999999875432211 11112234
Q ss_pred cccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhH
Q 040845 692 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAK 770 (824)
Q Consensus 692 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 (824)
+..|+|||+..++.++.++||||||+++||+++ |..||....... ....+.... +...+
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~--~~~~~~~~~------------------~~~~~ 216 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ--AREQVEKGY------------------RMSCP 216 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHHcCC------------------CCCCC
Confidence 677999999988889999999999999999998 888986532111 111110000 00111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 771 EQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 771 ~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
..++..+.+++.+||+.+|++||++.|+++.|.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 217 QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 234567899999999999999999999999875
No 171
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.6e-36 Score=319.45 Aligned_cols=251 Identities=23% Similarity=0.329 Sum_probs=201.0
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
.|++.+.||+|+||+||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3778899999999999999864 58999999986432 1223456789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 604 YMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
|+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 999999999886543 46899999999999999999999 9999999999999999999999999999997653222
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
......|+..|+|||++.+..++.++||||+||++|||++|+.||...... .....+...... .
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~~~~~~~~---------~---- 220 (285)
T cd05605 157 --TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREEVERRVKE---------D---- 220 (285)
T ss_pred --ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHHHHHHhhh---------c----
Confidence 112346899999999998888999999999999999999999999753211 111111110000 0
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
....+..++..+.+++.+||..||++|| ++.+++++
T Consensus 221 ---~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 221 ---QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ---ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 0001123466789999999999999999 88898776
No 172
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.6e-36 Score=312.04 Aligned_cols=248 Identities=31% Similarity=0.506 Sum_probs=201.3
Q ss_pred ceeeeccceEEEEEEECCCcEEEEEEeeccccc-hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCHH
Q 040845 533 NLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGR-AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSLE 611 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 611 (824)
++||+|+||.||+|...+++.||+|.+...... ..+.+..|++++++++|+||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 468999999999998777999999988755433 4567889999999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccc
Q 040845 612 KYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLA 691 (824)
Q Consensus 612 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 691 (824)
+++......+++..+..++.+++.|++||| +.+++||||+|+||+++.++.++|+|||.+.................
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 999776557889999999999999999999 99999999999999999999999999999976542221111122234
Q ss_pred cccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhH
Q 040845 692 TIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAK 770 (824)
Q Consensus 692 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 (824)
+..|+|||.+.++.++.++|+||+|+++|||+| |..||...... .....+.... ....+
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~~~~~------------------~~~~~ 217 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERIESGY------------------RMPAP 217 (251)
T ss_pred eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHHhcCC------------------CCCCC
Confidence 667999999988889999999999999999999 78887653221 1111111000 01112
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 771 EQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 771 ~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
..++..+.+++.+||..+|.+|||+.|+++.|+
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 234667999999999999999999999999886
No 173
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.9e-36 Score=319.24 Aligned_cols=250 Identities=28% Similarity=0.359 Sum_probs=204.2
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.+|++.+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|+|++++++.+......++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 57888899999999999999864 58999999987665555677889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
++++|.+++... .+++.++..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||.+........ .
T Consensus 100 ~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~--~ 172 (296)
T cd06654 100 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--K 172 (296)
T ss_pred CCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc--c
Confidence 999999998654 4788999999999999999999 99999999999999999999999999999876533221 1
Q ss_pred cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 686 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
.....+++.|+|||.+.+..++.++|||||||++|||++|+.||......+. ...+.....+
T Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-~~~~~~~~~~----------------- 234 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTP----------------- 234 (296)
T ss_pred cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-HHHHhcCCCC-----------------
Confidence 2234588899999999888899999999999999999999999865322111 1111000000
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+...+..+.+++.+||..+|++|||+.|++++
T Consensus 235 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 235 ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 000112345568899999999999999999999975
No 174
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.5e-36 Score=318.37 Aligned_cols=252 Identities=24% Similarity=0.326 Sum_probs=203.4
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
+.|++.+.||+|+||.||+|+.. ++..||+|++........+.+.+|+.+++.++|+||+++++++..+...++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56889999999999999999875 48999999987665556677889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
++++|..++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.+...... ...
T Consensus 92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~~~ 166 (292)
T cd06644 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--LQR 166 (292)
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecccc--ccc
Confidence 999999988766667899999999999999999999 999999999999999999999999999998754221 112
Q ss_pred cccccccccccCccCcC-----CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 686 QTQTLATIGYMAPEYGR-----EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
.....++..|+|||++. ...++.++|||||||++|||++|+.||...... .....+.....
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~------------- 232 (292)
T cd06644 167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKIAKSEP------------- 232 (292)
T ss_pred cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-HHHHHHhcCCC-------------
Confidence 23345788999999874 345688999999999999999999998653211 11111110000
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 761 SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....+..++..+.+++.+||..+|++||++.|++++
T Consensus 233 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 233 ----PTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred ----ccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0001122345568899999999999999999999874
No 175
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.9e-36 Score=318.98 Aligned_cols=269 Identities=23% Similarity=0.415 Sum_probs=205.0
Q ss_pred cCCCCceeeeccceEEEEEEE-----CCCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecC--CeeE
Q 040845 528 KFSENNLIGRGGFGSVYKARI-----RDGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNE--EFKA 599 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 599 (824)
-|++.+.||+|+||.||.|++ .++..||+|.++... ....+.+.+|+++++.++|||++++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467889999999999999974 247889999986543 33456788999999999999999999998775 5788
Q ss_pred EEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 600 LVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
+||||+++++|.+++......+++.++..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++..+..
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence 999999999999999766556899999999999999999999 99999999999999999999999999999987643
Q ss_pred CCCcc-ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCC-cchhhccc
Q 040845 680 EDQSM-TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPI-STMEVVDA 757 (824)
Q Consensus 680 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 757 (824)
..... ......++..|+|||.+.+..++.++||||||+++||++|++.|+........ ......... ........
T Consensus 162 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05079 162 DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFL---KMIGPTHGQMTVTRLVRV 238 (284)
T ss_pred CccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhh---hhcccccccccHHHHHHH
Confidence 32221 11234467789999999888899999999999999999998876543211000 000000000 00000000
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
. ........+..++..+.+++.+||+.+|++|||+.++++.++++
T Consensus 239 -~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 239 -L--EEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred -H--HcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0 00001112234677899999999999999999999999999875
No 176
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.8e-36 Score=315.14 Aligned_cols=247 Identities=23% Similarity=0.332 Sum_probs=194.7
Q ss_pred eeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCH
Q 040845 535 IGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSL 610 (824)
Q Consensus 535 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 610 (824)
||+|+||.||+++.+ +|+.||+|.+.... ......+..|++++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999865 58999999986432 12234456799999999999999999999999999999999999999
Q ss_pred HHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccccc
Q 040845 611 EKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQT 689 (824)
Q Consensus 611 ~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 689 (824)
.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++....... .....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~ 154 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQR 154 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeecc
Confidence 98886543 46889999999999999999999 9999999999999999999999999999988654322 12234
Q ss_pred cccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhh
Q 040845 690 LATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVA 769 (824)
Q Consensus 690 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (824)
.++..|+|||++.+..++.++||||+||++|||++|+.||...... .............. . . . .
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~--------~-~-----~-~ 218 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKRRTLEDE--------V-K-----F-E 218 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHHHhhccc--------c-c-----c-c
Confidence 5889999999998888999999999999999999999998653211 11111111111000 0 0 0 0
Q ss_pred HHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 770 KEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 770 ~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
...++.++.+++.+||+.||++||+++|+++...
T Consensus 219 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 219 HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred cccCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 1134567899999999999999999977764443
No 177
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.3e-36 Score=320.72 Aligned_cols=262 Identities=26% Similarity=0.409 Sum_probs=205.6
Q ss_pred hccCCCCceeeeccceEEEEEEECC-----------------CcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCccee
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD-----------------GMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVK 587 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 587 (824)
..+|++.+.||+|+||.||+|+..+ +..||+|.+..... ...+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578999999999999999997642 24689999875432 34567889999999999999999
Q ss_pred EEeeeecCCeeEEEEeccCCCCHHHHhhhCC----------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCC
Q 040845 588 VISSCSNEEFKALVLEYMPHGSLEKYLHSSN----------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSN 657 (824)
Q Consensus 588 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~N 657 (824)
+++++..+...++||||+++++|.+++.... ..+++..++.++.|++.|++||| +.+++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhc
Confidence 9999999999999999999999999987644 25889999999999999999999 9999999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh--CCCCCcccccC
Q 040845 658 VLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT--RKKPTDELFNG 735 (824)
Q Consensus 658 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t--g~~p~~~~~~~ 735 (824)
|+++.++.++++|||++................++..|+|||.+.++.++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 9999999999999999986544333333334456788999999988889999999999999999998 66777543211
Q ss_pred cchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 736 EMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
+ ............ . .......+..++.++.+++.+||+.||++|||+.|+++.|+
T Consensus 241 ~--~~~~~~~~~~~~-----~------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 Q--VIENAGHFFRDD-----G------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred H--HHHHHHhccccc-----c------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1 111111100000 0 00000112234567999999999999999999999999885
No 178
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5.1e-36 Score=312.00 Aligned_cols=254 Identities=26% Similarity=0.384 Sum_probs=207.2
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
++|++.+.||+|+||.||+|... +++.+|+|++........+.+.+|++++++++||||+++++++.+....+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57889999999999999999865 57899999997665556678899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
++++|.+++......+++.++..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||.+....... ..
T Consensus 83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~~ 157 (262)
T cd06613 83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--AK 157 (262)
T ss_pred CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhh--hc
Confidence 999999999876557899999999999999999999 9999999999999999999999999999987654321 12
Q ss_pred cccccccccccCccCcCCC---CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 686 QTQTLATIGYMAPEYGREG---QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
.....++..|+|||.+... .++.++||||||+++|||++|+.||......... ........ .
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~-~~~~~~~~--------~------ 222 (262)
T cd06613 158 RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL-FLISKSNF--------P------ 222 (262)
T ss_pred cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhccC--------C------
Confidence 2334578899999998776 7899999999999999999999998753221111 10000000 0
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
......+...+..+.+++.+||..+|++|||+++++.+
T Consensus 223 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 223 -PPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred -CccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00011123456678999999999999999999999864
No 179
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3e-36 Score=314.61 Aligned_cols=258 Identities=24% Similarity=0.341 Sum_probs=207.4
Q ss_pred ccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||.||+|.. .+++.||||.+.... ......+.+|+.+++.++|+||+++++++.+++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999985 468999999876432 223457888999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 603 EYMPHGSLEKYLHS---SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 603 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
||+++++|.+++.. ....+++..++.++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999999864 2346889999999999999999999 99999999999999999999999999999876543
Q ss_pred CCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 680 EDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 680 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
... ......++..|+|||.+.+..++.++|+||||+++|||++|..||...........+.+.. ...
T Consensus 159 ~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~--- 225 (267)
T cd08229 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ--------CDY--- 225 (267)
T ss_pred CCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhc--------CCC---
Confidence 221 1223458889999999988889999999999999999999999986422111111111000 000
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
....+..++..+.+++.+||..||++|||+.+|++.++++.
T Consensus 226 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 226 ------PPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred ------CCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 00011235667999999999999999999999999998864
No 180
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.6e-36 Score=318.51 Aligned_cols=255 Identities=27% Similarity=0.433 Sum_probs=204.8
Q ss_pred hccCCCCceeeeccceEEEEEEECC------CcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCee
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD------GMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFK 598 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 598 (824)
.++|.+.+.||+|+||.||+|.+++ +..||+|.+.... ......+.+|+.+++.++|+||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 4678899999999999999998642 4689999976442 23345678899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhhCC---------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEe
Q 040845 599 ALVLEYMPHGSLEKYLHSSN---------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLS 669 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 669 (824)
++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEEC
Confidence 99999999999999986532 24678899999999999999999 9999999999999999999999999
Q ss_pred ecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCC
Q 040845 670 DFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLP 748 (824)
Q Consensus 670 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 748 (824)
|||+++...............++..|+|||.+.++.++.++|||||||++||+++ |..||...... ....+....
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~-- 237 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--EVLKFVIDG-- 237 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--HHHHHHhcC--
Confidence 9999986644333222233456788999999988889999999999999999998 88888642211 111111100
Q ss_pred CcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 749 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
.....+..++..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 238 ----------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 238 ----------------GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred ----------------CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 000112234667899999999999999999999999885
No 181
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4e-36 Score=313.83 Aligned_cols=256 Identities=28% Similarity=0.411 Sum_probs=202.5
Q ss_pred HHhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 523 FQATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 523 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
+.+++.+.....||+|+||.||+|++. ++..||+|.+........+.+.+|+.+++.++|+||+++++++..++..++|
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence 345566666789999999999999855 5788999998766555667889999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-CCcEEEeecccccccC
Q 040845 602 LEYMPHGSLEKYLHSSNYSL--DIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLT 678 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~Dfg~a~~~~ 678 (824)
+||+++++|.+++......+ ++..+..++.|++.|++||| +.+|+||||||+||+++. ++.++|+|||.+....
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 99999999999998654344 78888999999999999999 999999999999999976 6799999999987653
Q ss_pred CCCCccccccccccccccCccCcCCCC--CCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcc
Q 040845 679 GEDQSMTQTQTLATIGYMAPEYGREGQ--VSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVD 756 (824)
Q Consensus 679 ~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (824)
.... ......++..|+|||++.... ++.++||||+|+++|+|++|+.||........ ..+.....
T Consensus 161 ~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~~~~~~~~--------- 227 (268)
T cd06624 161 GINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--AMFKVGMF--------- 227 (268)
T ss_pred cCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--hHhhhhhh---------
Confidence 2221 122335788999999886543 78899999999999999999999865321111 11100000
Q ss_pred ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 757 ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
. .....+..++..+.+++.+||..+|++|||+.|++++
T Consensus 228 ----~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 228 ----K---IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ----c---cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 0 0001122345678999999999999999999999875
No 182
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4.7e-36 Score=311.71 Aligned_cols=252 Identities=27% Similarity=0.443 Sum_probs=202.9
Q ss_pred ccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccC
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMP 606 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 606 (824)
++|++.+.||+|++|.||+|.+..+..||+|.+... ....+.+.+|+.++++++|+|++++++++.. +..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPG-TMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccC-CccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCC
Confidence 568888999999999999999887778999987643 2334678899999999999999999998754 56789999999
Q ss_pred CCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 607 HGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 607 ~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
+++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||||+||++++++.++|+|||.+......... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-~ 159 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT-A 159 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc-c
Confidence 999999997643 45789999999999999999999 999999999999999999999999999999765432211 1
Q ss_pred cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchh
Q 040845 686 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
.....++..|+|||...+..++.++||||||+++|||++ |..||......+ ...+......
T Consensus 160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~~---------------- 221 (260)
T cd05069 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQVERGYR---------------- 221 (260)
T ss_pred cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC----------------
Confidence 222346678999999988889999999999999999999 888886532211 1111111000
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
...+...+..+.+++.+||..||++||+++++++.|++
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 222 --MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 00112345678999999999999999999999999875
No 183
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=3.5e-36 Score=313.04 Aligned_cols=254 Identities=29% Similarity=0.488 Sum_probs=206.9
Q ss_pred hccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.++|.+.+.||+|+||.||+|..++++.||||.+... ....+++.+|+.++++++|+||+++++++......++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 4688999999999999999999887889999998743 234567889999999999999999999999988999999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 606 PHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 606 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
++++|.+++.... ..+++.++..++.|++.|++||| +.+++|+||||+||++++++.++++|||.+....... ..
T Consensus 84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-~~ 159 (261)
T cd05034 84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE-YT 159 (261)
T ss_pred CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchh-hh
Confidence 9999999997644 46899999999999999999999 9999999999999999999999999999988654321 11
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
.......+..|+|||.+.+..++.++||||+|+++||+++ |+.||..... ......+... .
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-~~~~~~~~~~-~---------------- 221 (261)
T cd05034 160 AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN-REVLEQVERG-Y---------------- 221 (261)
T ss_pred hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcC-C----------------
Confidence 1122234678999999998889999999999999999999 8988865321 1111111100 0
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
....+..++..+.+++.+||+.+|++||+++++.+.|+.
T Consensus 222 --~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 222 --RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 001112335678999999999999999999999998875
No 184
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.4e-36 Score=332.38 Aligned_cols=266 Identities=19% Similarity=0.207 Sum_probs=200.1
Q ss_pred hccCCCCceeeeccceEEEEEEECC-CcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
...|.+.+.||+|+||.||+|.+.. ++.||||... ...+.+|++++++++|+||+++++++...+..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 4578999999999999999998754 7899999632 23467899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+. ++|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 242 ~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 242 YR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred cC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 94 6999988766557999999999999999999999 9999999999999999999999999999998764333222
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccC------cchhhhhhhhhCC-C-cch----
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNG------EMTLKHWVNDCLP-I-STM---- 752 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~------~~~~~~~~~~~~~-~-~~~---- 752 (824)
......||..|+|||++.+..++.++|||||||++|||++|..|+...... ...+...+..... . ...
T Consensus 318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~ 397 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAG 397 (461)
T ss_pred cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcc
Confidence 233456899999999999989999999999999999999988765432111 0111111111100 0 000
Q ss_pred -hhcccc------ccCc--hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 -EVVDAN------LLSQ--EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 -~~~~~~------~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...... .... ..............+.+|+.+||+.||.+|||+.|++++
T Consensus 398 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred hHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000000 0000 000000001233468899999999999999999999986
No 185
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.3e-36 Score=311.36 Aligned_cols=249 Identities=31% Similarity=0.494 Sum_probs=205.3
Q ss_pred hccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.++|++.+.||+|+||.||+|... |+.||+|.+..... ..+.+..|+.++++++|+||+++++++.+....++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 357888999999999999999876 89999999875533 4567888999999999999999999999899999999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 606 PHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 606 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
++++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||||+||+++.++.++|+|||.+........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-- 157 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-- 157 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence 9999999997654 36899999999999999999999 99999999999999999999999999999986532111
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
....+..|+|||.+..+.++.++||||||+++||+++ |..||...... .....+....
T Consensus 158 ---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~---------------- 216 (256)
T cd05039 158 ---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPHVEKGY---------------- 216 (256)
T ss_pred ---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhcCC----------------
Confidence 2235678999999988889999999999999999997 99888653211 1111111000
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
....+..++..+.+++.+||..+|++|||+.|+++.|+.
T Consensus 217 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 217 --RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred --CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 000112346778999999999999999999999999975
No 186
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4.3e-36 Score=311.38 Aligned_cols=249 Identities=24% Similarity=0.348 Sum_probs=204.0
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecc--ccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQ--CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|++.+.||+|++|.||+|+.+ +++.||+|.+... .....+.+..|+++++.++|||++++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777899999999999999865 5899999998643 234456788899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSS-NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
+++++|.+++... ...+++..++.++.|++.|++||| +.+++|+||+|+||++++++.++++|||++........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~- 156 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN- 156 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc-
Confidence 9999999999875 357889999999999999999999 99999999999999999999999999999886643322
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
......+++.|+|||+..+..++.++|+||||+++|||++|+.||...... .....+.. . ..
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~---~---------~~--- 218 (256)
T cd08529 157 -FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--ALILKIIR---G---------VF--- 218 (256)
T ss_pred -hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHc---C---------CC---
Confidence 122345788999999999888999999999999999999999998753211 11111000 0 00
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...+..++..+.+++.+||+.+|++||++.+++++
T Consensus 219 ---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 219 ---PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ---CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 00111345678999999999999999999999875
No 187
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.1e-36 Score=321.50 Aligned_cols=257 Identities=27% Similarity=0.468 Sum_probs=201.9
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCc--EEEEEEeeccc-cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGM--EVAVKVFNLQC-GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 600 (824)
.++|++.+.||+|+||.||+|.++ ++. .+|+|.++... ......+.+|++++.++ +|+||+++++++..+...++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 357888999999999999999865 354 45777765332 23445788899999999 89999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCc
Q 040845 601 VLEYMPHGSLEKYLHSSN---------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV 665 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 665 (824)
||||+++++|.++++..+ ..+++.+++.++.|++.|++||| +.+++||||||+||++++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCc
Confidence 999999999999997543 25788999999999999999999 999999999999999999999
Q ss_pred EEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhh
Q 040845 666 AHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVN 744 (824)
Q Consensus 666 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 744 (824)
+||+|||++..... ........++..|+|||.+.+..++.++|||||||++|||+| |..||...... ....
T Consensus 163 ~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~ 234 (303)
T cd05088 163 AKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYE 234 (303)
T ss_pred EEeCccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-----HHHH
Confidence 99999999863211 111112234667999999988889999999999999999998 99998653211 1111
Q ss_pred hhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 040845 745 DCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDS 808 (824)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 808 (824)
.... . .....+..++..+.+++.+||+.+|++||++.++++.++++.+.
T Consensus 235 ~~~~-~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 235 KLPQ-G--------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred HHhc-C--------------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1000 0 00001122456789999999999999999999999999887643
No 188
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.3e-37 Score=329.12 Aligned_cols=238 Identities=25% Similarity=0.336 Sum_probs=192.3
Q ss_pred ceeeeccceEEEEEEE----CCCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccC
Q 040845 533 NLIGRGGFGSVYKARI----RDGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMP 606 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 606 (824)
+.||+|+||.||+++. .+|+.||+|++..... .....+..|++++++++||||+++++++.++...++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 3588999999975432 233456779999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 040845 607 HGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQ 686 (824)
Q Consensus 607 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 686 (824)
+|+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++........ ..
T Consensus 82 ~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--~~ 155 (318)
T cd05582 82 GGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KA 155 (318)
T ss_pred CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC--ce
Confidence 999999997654 6899999999999999999999 99999999999999999999999999999876532211 22
Q ss_pred ccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhh
Q 040845 687 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIH 766 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (824)
....|++.|+|||.+.+..++.++|||||||++|||++|+.||......+ ........ .
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~-~~~~i~~~------------~-------- 214 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE-TMTMILKA------------K-------- 214 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH-HHHHHHcC------------C--------
Confidence 23568999999999988889999999999999999999999987532111 01100000 0
Q ss_pred hhhHHHHHHHHHHHHHHccccCCCCCCCHHH
Q 040845 767 FVAKEQCVSFVFNLALECTVESPEQRINAKE 797 (824)
Q Consensus 767 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~e 797 (824)
...+..++..+.+++.+||+.||++||++.+
T Consensus 215 ~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 215 LGMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 0011234566889999999999999999544
No 189
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.4e-36 Score=312.08 Aligned_cols=248 Identities=31% Similarity=0.458 Sum_probs=200.6
Q ss_pred ccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeee-ecCCeeEEEEecc
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSC-SNEEFKALVLEYM 605 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e~~ 605 (824)
.+|++.+.||+|+||.||+|... |+.||+|.++.. ...+.+..|+.++++++|+|++++++++ .++...++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 57888999999999999999876 888999988643 3346788999999999999999999976 4556789999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 606 PHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 606 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+|++|||++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 9999999997654 34789999999999999999999 9999999999999999999999999999987543221
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
....++..|+|||+..+..++.++|||||||++|||++ |+.||... .............
T Consensus 157 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~~~~~------------- 216 (256)
T cd05082 157 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRVEKGY------------- 216 (256)
T ss_pred --CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHhcCC-------------
Confidence 12234668999999988889999999999999999998 88887642 1111111110000
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
....+..++..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 217 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 217 --KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred --CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 0001123567789999999999999999999999998753
No 190
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.5e-36 Score=314.11 Aligned_cols=253 Identities=26% Similarity=0.377 Sum_probs=202.2
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
++|++.+.||+|+||.||+|+.. +++.||+|+++.........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46778889999999999999764 58999999987665555567888999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
++++|.+++...+ .+++.++..++.|++.|++||| +.+++|+||||+||+++.++.++|+|||.+...... ...
T Consensus 89 ~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~--~~~ 162 (267)
T cd06645 89 GGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT--IAK 162 (267)
T ss_pred CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc--ccc
Confidence 9999999987655 6899999999999999999999 899999999999999999999999999998765322 112
Q ss_pred cccccccccccCccCcC---CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 686 QTQTLATIGYMAPEYGR---EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
.....|+..|+|||.+. ...++.++||||+||++|||++|+.||.......... ........ .+.
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~-~~~~~~~~-------~~~---- 230 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-LMTKSNFQ-------PPK---- 230 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH-hhhccCCC-------CCc----
Confidence 23446889999999874 4558899999999999999999999986532211110 00000000 000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
......++..+.+++.+||+.+|++||++++++++
T Consensus 231 ----~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 231 ----LKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred ----ccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 00011234568899999999999999999998864
No 191
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.8e-36 Score=319.65 Aligned_cols=262 Identities=24% Similarity=0.419 Sum_probs=202.5
Q ss_pred ccCCCCceeeeccceEEEEEEEC-----------------CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-----------------DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKV 588 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l 588 (824)
++|++.+.||+|+||.||+|.+. ++..||+|++.... ......+.+|+++++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56899999999999999998643 23468999987543 2345678899999999999999999
Q ss_pred EeeeecCCeeEEEEeccCCCCHHHHhhhCC----------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCe
Q 040845 589 ISSCSNEEFKALVLEYMPHGSLEKYLHSSN----------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNV 658 (824)
Q Consensus 589 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Ni 658 (824)
++++...+..++||||+++++|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChheE
Confidence 999999999999999999999999987543 23677889999999999999999 99999999999999
Q ss_pred eeCCCCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh--CCCCCcccccCc
Q 040845 659 LLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT--RKKPTDELFNGE 736 (824)
Q Consensus 659 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t--g~~p~~~~~~~~ 736 (824)
+++.++.++++|||++..+.............++..|+|||....+.++.++|||||||++|||++ |..||......+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 999999999999999986543322222222345678999998888889999999999999999998 667776432211
Q ss_pred chhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 737 MTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
++.... ........ ......+..++..+.+++.+||+.||++||++.|+++.|++
T Consensus 242 -----~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 242 -----VIENTG-----EFFRDQGR---QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred -----HHHHHH-----HHHhhccc---cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111000 00000000 00011122456789999999999999999999999999863
No 192
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.3e-36 Score=313.34 Aligned_cols=248 Identities=33% Similarity=0.562 Sum_probs=204.9
Q ss_pred ceeeeccceEEEEEEECC----CcEEEEEEeeccccch-hhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIRD----GMEVAVKVFNLQCGRA-FKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||.||+|.... +..||+|.+....... .+.+.+|+++++.++|+|++++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999998653 7889999987654333 67888999999999999999999999999999999999999
Q ss_pred CCHHHHhhhC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 608 GSLEKYLHSS--------NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 608 g~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
++|.+++... ...+++.++..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999876 357899999999999999999999 99999999999999999999999999999987654
Q ss_pred CCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhcccc
Q 040845 680 EDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDAN 758 (824)
Q Consensus 680 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (824)
...........++..|+|||.+....++.++||||+|+++|||++ |..||..... .........
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~------------- 222 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--EEVLEYLRK------------- 222 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHc-------------
Confidence 433233344557889999999988889999999999999999999 5888876411 111111110
Q ss_pred ccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 759 LLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
......+..++.++.+++.+||..+|++|||+.|++++|+
T Consensus 223 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 223 -----GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -----CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0011122345678999999999999999999999999873
No 193
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.8e-36 Score=312.42 Aligned_cols=239 Identities=22% Similarity=0.360 Sum_probs=189.7
Q ss_pred ceeeeccceEEEEEEECC-------------CcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeE
Q 040845 533 NLIGRGGFGSVYKARIRD-------------GMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKA 599 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 599 (824)
+.||+|+||.||+|++.+ ...||+|++..........+.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998542 2358999876654555567888999999999999999999999998999
Q ss_pred EEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCc-------EEEeecc
Q 040845 600 LVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV-------AHLSDFG 672 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~-------~kl~Dfg 672 (824)
+||||+++|+|..++......+++..++.++.|+++|++||| +.+|+||||||+||+++.++. ++++|||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 999999999999998876667899999999999999999999 999999999999999987664 8999999
Q ss_pred cccccCCCCCccccccccccccccCccCcC-CCCCCccchHHHHHHHHHHHH-hCCCCCcccccCcchhhhhhhhhCCCc
Q 040845 673 IAKLLTGEDQSMTQTQTLATIGYMAPEYGR-EGQVSTNGDVYSFGIMLMETF-TRKKPTDELFNGEMTLKHWVNDCLPIS 750 (824)
Q Consensus 673 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~el~-tg~~p~~~~~~~~~~~~~~~~~~~~~~ 750 (824)
.+...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..||......+ ........
T Consensus 158 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~~~~---- 225 (262)
T cd05077 158 IPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--KERFYEGQ---- 225 (262)
T ss_pred CCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--HHHHHhcC----
Confidence 98754321 2345778899999886 456899999999999999998 5777765421111 00000000
Q ss_pred chhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 751 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
.. ........+.+++.+||+.||++||++.++++++
T Consensus 226 --------~~--------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 226 --------CM--------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred --------cc--------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00 0001235688999999999999999999999876
No 194
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.2e-36 Score=318.04 Aligned_cols=253 Identities=25% Similarity=0.362 Sum_probs=205.8
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
.++|++.+.||+|+||.||+|.+. ++..||+|++........+.+..|++++++++|+||+++++++..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356888899999999999999875 5899999998766555567788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+++++|.+++...+..+++..+..++.|++.|++||| +.+|+|+||+|+||+++.++.++|+|||.+....... .
T Consensus 84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--~ 158 (280)
T cd06611 84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL--Q 158 (280)
T ss_pred cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcccc--c
Confidence 9999999999876667899999999999999999999 9999999999999999999999999999887543221 1
Q ss_pred ccccccccccccCccCcC-----CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 685 TQTQTLATIGYMAPEYGR-----EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
......++..|+|||.+. ...++.++||||+|+++|||++|+.||...... .....+.....
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~------------ 225 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-RVLLKILKSEP------------ 225 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-HHHHHHhcCCC------------
Confidence 223345888999999874 345678999999999999999999998763211 11111111000
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....+..++..+.+++.+||+.+|++||++.+++++
T Consensus 226 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 226 -----PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred -----CCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0011122345678999999999999999999999876
No 195
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.6e-36 Score=320.90 Aligned_cols=261 Identities=27% Similarity=0.459 Sum_probs=207.0
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCc----EEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGM----EVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
++|+..+.||+|+||.||+|.+. +|. .||+|.+..... .....+.+|+.+++.++||||+++++++..+ ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 56788899999999999999864 344 578888764432 2234678899999999999999999998754 4679
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
++||+++|+|.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 86 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred eehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccccCc
Confidence 99999999999999876667899999999999999999999 999999999999999999999999999999876533
Q ss_pred CCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
..........++..|+|||.+.+..++.++|||||||++||+++ |+.||..... .....++.....
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~----------- 229 (303)
T cd05110 163 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLEKGER----------- 229 (303)
T ss_pred ccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHCCCC-----------
Confidence 33222233446778999999988889999999999999999998 8899865321 112222211100
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhcc
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSLLR 811 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 811 (824)
...+..++..+.+++.+||..+|++||++.++++.++++.+...+
T Consensus 230 -------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~~ 274 (303)
T cd05110 230 -------LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQR 274 (303)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchhh
Confidence 001122455688999999999999999999999999998655443
No 196
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.9e-36 Score=328.87 Aligned_cols=266 Identities=25% Similarity=0.323 Sum_probs=199.1
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCC-----eeE
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEE-----FKA 599 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 599 (824)
+|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++|+||+++++++..+. ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788899999999999999864 68999999885432 223456788999999999999999999998766 789
Q ss_pred EEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 600 LVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
+||||+. ++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 lv~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEeeccc-cCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 9999996 58888876544 6899999999999999999999 99999999999999999999999999999986532
Q ss_pred CCCccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhh----
Q 040845 680 EDQSMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEV---- 754 (824)
Q Consensus 680 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---- 754 (824)
.. ........++..|+|||.+.+. .++.++||||+||++|||++|+.||......+ ...... ........+.
T Consensus 156 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~-~~~g~~~~~~~~~~ 232 (372)
T cd07853 156 DE-SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLIT-DLLGTPSLEAMRSA 232 (372)
T ss_pred Cc-cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHHHHH-HHcCCCCHHHHHHh
Confidence 22 1222344678999999988764 47899999999999999999999997532211 111111 0000000000
Q ss_pred -------ccccccCchhh--hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 755 -------VDANLLSQEDI--HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 755 -------~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
+.......... ........+.++.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000000000 000111235678999999999999999999999886
No 197
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.1e-36 Score=332.64 Aligned_cols=266 Identities=21% Similarity=0.197 Sum_probs=202.3
Q ss_pred hccCCCCceeeeccceEEEEEEEC---CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR---DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
..+|.+.+.||+|+||.||+|... .+..||+|.+... ....+|+++++.++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999753 3578999987532 33567999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
|++. ++|.+++... ..+++.+++.++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++........
T Consensus 166 e~~~-~~l~~~l~~~-~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 166 PKYK-CDLFTYVDRS-GPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred hhcC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 9995 6898888544 47899999999999999999999 99999999999999999999999999999987654433
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCc--chhhhhhhhhCCCc------ch--
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGE--MTLKHWVNDCLPIS------TM-- 752 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~------~~-- 752 (824)
........||+.|+|||++.+..++.++||||+||++|||++|+.||.+..... ..+...+....... ..
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~ 320 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTN 320 (392)
T ss_pred cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchh
Confidence 333344569999999999998899999999999999999999999987643221 11111111110000 00
Q ss_pred --hhccccccC-c---hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 --EVVDANLLS-Q---EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 --~~~~~~~~~-~---~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
......... . ...........+.++.+++.+||..||++|||+.|++.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 321 LCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000 0 000001112345678899999999999999999999887
No 198
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.1e-36 Score=318.14 Aligned_cols=256 Identities=27% Similarity=0.436 Sum_probs=204.4
Q ss_pred hccCCCCceeeeccceEEEEEEEC------CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCee
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR------DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFK 598 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 598 (824)
.++|++.+.||+|+||.||+|..+ ++..||+|++..... .....+.+|+.+++.++||||+++++++.++...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467889999999999999999864 467899999865432 3346688899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhhCC---------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCC
Q 040845 599 ALVLEYMPHGSLEKYLHSSN---------------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSN 657 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~---------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~N 657 (824)
++||||+++|+|.+++.... ..+++.+++.++.|++.|++||| +.+++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhh
Confidence 99999999999999996432 24678889999999999999999 9999999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCc
Q 040845 658 VLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGE 736 (824)
Q Consensus 658 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~ 736 (824)
|++++++.++++|||.+..+..............+..|+|||.+.+..++.++|||||||++|||++ |..||.+....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~- 239 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE- 239 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 9999999999999999876543322222223345678999999988899999999999999999998 77887543211
Q ss_pred chhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 737 MTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
.+....... ... ..+..++..+.+++.+||+.||++|||+.|+++.|++
T Consensus 240 ----~~~~~~~~~--------~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 ----EVIYYVRDG--------NVL-------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ----HHHHHHhcC--------CCC-------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111111000 000 0112346679999999999999999999999999863
No 199
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.5e-36 Score=318.29 Aligned_cols=268 Identities=23% Similarity=0.306 Sum_probs=202.8
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
.++|++.+.||+|+||.||+|+.+ +++.||+|.++... ......+.+|+.+++.++||||+++++++..+...++|||
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 357889999999999999999865 58899999986543 2334567789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|++ ++|.+++......+++..+..++.|+++|++||| +.+|+|+||||+||++++++.++|+|||++........
T Consensus 85 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~- 159 (301)
T cd07873 85 YLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK- 159 (301)
T ss_pred ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC-
Confidence 996 5999998876667889999999999999999999 99999999999999999999999999999875432221
Q ss_pred cccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcc----hhhcccc
Q 040845 684 MTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIST----MEVVDAN 758 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 758 (824)
......++..|+|||.+.+. .++.++||||+||++|||++|+.||......+ ....+........ .......
T Consensus 160 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
T cd07873 160 -TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE--QLHFIFRILGTPTEETWPGILSNE 236 (301)
T ss_pred -cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHcCCCChhhchhhhccc
Confidence 12234578899999987654 57889999999999999999999987532211 1111111111000 0000000
Q ss_pred ccC---chh----hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 759 LLS---QED----IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 759 ~~~---~~~----~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
... .+. ........++..+.+++.+|++.||.+|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000 000 0001112456678999999999999999999999874
No 200
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.4e-36 Score=325.84 Aligned_cols=237 Identities=29% Similarity=0.333 Sum_probs=188.5
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHH-HHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECA-MMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||+||+|+.. +|+.||+|++.... ......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999875 58999999987542 122233444444 56889999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (323)
T cd05575 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--KTTS 154 (323)
T ss_pred CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--Cccc
Confidence 99999997654 6889999999999999999999 9999999999999999999999999999987532221 1223
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~--------~~~-------- 213 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----AEMYDNILN--------KPL-------- 213 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----HHHHHHHHc--------CCC--------
Confidence 44689999999999998999999999999999999999999875311 111111110 000
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINAK 796 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ 796 (824)
..+...+..+.+++.+|++.||++||++.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 214 RLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 00112356688999999999999999985
No 201
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.1e-36 Score=329.44 Aligned_cols=258 Identities=23% Similarity=0.287 Sum_probs=201.6
Q ss_pred HHHhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCe
Q 040845 522 LFQATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEF 597 (824)
Q Consensus 522 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 597 (824)
+....++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.++..
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 3444588999999999999999999876 58899999986432 2234557789999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 040845 598 KALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 677 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 677 (824)
.++||||+++|+|.+++... .++...+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~ 192 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEc
Confidence 99999999999999998754 4788888999999999999999 999999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccCccCcCCC----CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchh
Q 040845 678 TGEDQSMTQTQTLATIGYMAPEYGREG----QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTME 753 (824)
Q Consensus 678 ~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (824)
..... .......||+.|+|||++... .++.++||||+||++|||++|+.||...... .....+... .
T Consensus 193 ~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-~~~~~i~~~---~---- 263 (371)
T cd05622 193 NKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKIMNH---K---- 263 (371)
T ss_pred CcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH-HHHHHHHcC---C----
Confidence 43221 122345699999999988643 3789999999999999999999999752111 011111100 0
Q ss_pred hccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCC--CCCHHHHHHHH
Q 040845 754 VVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQ--RINAKEIVAKL 802 (824)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~L 802 (824)
.....+....++..+.+++.+|+..++.+ |+++.|++++.
T Consensus 264 ---------~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 264 ---------NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred ---------CcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 00011111234667889999999844443 78999999875
No 202
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.7e-36 Score=326.09 Aligned_cols=267 Identities=22% Similarity=0.266 Sum_probs=198.3
Q ss_pred HhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCC----
Q 040845 524 QATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEE---- 596 (824)
Q Consensus 524 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 596 (824)
...++|++.+.||+|+||.||+|... +|..||||++.... ......+.+|+.+++.++||||+++++++....
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 34578999999999999999999864 58999999986432 233456778999999999999999999986443
Q ss_pred --eeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccc
Q 040845 597 --FKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 674 (824)
Q Consensus 597 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 674 (824)
..++||||+++ ++.+.+.. .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 57899999965 67666643 4788889999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhh
Q 040845 675 KLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEV 754 (824)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (824)
...... .......+|+.|+|||.+.+..++.++||||+||++|||++|+.||......+ ......... .....+.
T Consensus 171 ~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~-~~~~~~~~~-~~~~~~~ 245 (359)
T cd07876 171 RTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID-QWNKVIEQL-GTPSAEF 245 (359)
T ss_pred cccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhc-CCCcHHH
Confidence 754322 12233568999999999999899999999999999999999999997532110 010000000 0000000
Q ss_pred c-----------c--ccccCch----------hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 755 V-----------D--ANLLSQE----------DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 755 ~-----------~--~~~~~~~----------~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
. . +...... ..........+..+.+++.+||..||++|||+.|++++-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 0 0 0000000 000000112356689999999999999999999999874
No 203
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.4e-36 Score=316.55 Aligned_cols=271 Identities=25% Similarity=0.408 Sum_probs=209.4
Q ss_pred ccCCCCceeeeccceEEEEEEEC-----CCcEEEEEEeeccccc-hhhhHHHHHHHHhcCCCCcceeEEeeeec--CCee
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-----DGMEVAVKVFNLQCGR-AFKSFDVECAMMKSIRHRNLVKVISSCSN--EEFK 598 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 598 (824)
+.|+..+.||+|+||.||+|++. ++..||||++...... ..+.+..|+++++.++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45777899999999999999854 3688999998765443 46788999999999999999999999877 5678
Q ss_pred EEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 599 ALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
++||||+++++|.+++......+++..+..++.|++.|++||| +.+++|+||||+||+++.++.++++|||.+....
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 9999999999999999876667899999999999999999999 9999999999999999999999999999998765
Q ss_pred CCCCccc-cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 679 GEDQSMT-QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 679 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
....... .....++..|+|||...+..++.++||||||+++|||++|+.|+......... ++..............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIGIAQGQMIVTRLLE 237 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---ccccccccccHHHHHH
Confidence 3322211 12233566799999998888999999999999999999999998653222111 0000000000000000
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
... ...+...+..++.++.+++.+||+.+|++||||.|+++.|+++
T Consensus 238 ~~~--~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 238 LLK--EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHH--cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 000 0011112234567899999999999999999999999999875
No 204
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=4.3e-36 Score=312.53 Aligned_cols=252 Identities=27% Similarity=0.478 Sum_probs=195.3
Q ss_pred ceeeeccceEEEEEEECC----CcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeee-cCCeeEEEEeccC
Q 040845 533 NLIGRGGFGSVYKARIRD----GMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCS-NEEFKALVLEYMP 606 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 606 (824)
+.||+|+||.||+|.+.+ +..||+|.+.... ....+.+.+|+.+++.++||||+++++++. .+...++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999997532 4579999875332 234567888999999999999999999875 4556889999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc--c
Q 040845 607 HGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS--M 684 (824)
Q Consensus 607 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~ 684 (824)
+|+|.+++.......++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||+++........ .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 99999999876556788888999999999999999 999999999999999999999999999999765432211 1
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCC-CCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKK-PTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
......++..|+|||...+..++.++|||||||++|||++|+. ||.... .......+...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--~~~~~~~~~~~----------------- 218 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--SFDITVYLLQG----------------- 218 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHhcC-----------------
Confidence 1123346778999999988889999999999999999999654 444321 11111111000
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRD 807 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 807 (824)
.....+..++..+.+++.+||..+|++||++.|+++.|+++..
T Consensus 219 -~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 219 -RRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred -CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0001112345678999999999999999999999999998753
No 205
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.5e-36 Score=323.64 Aligned_cols=260 Identities=26% Similarity=0.419 Sum_probs=206.5
Q ss_pred ccCCCCceeeeccceEEEEEEECC--------CcEEEEEEeeccc-cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCC
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD--------GMEVAVKVFNLQC-GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEE 596 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 596 (824)
.+|.+.+.||+|+||.||+|++.. +..||+|.++... ....+.+.+|+++++++ +||||+++++++..+.
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 468899999999999999997421 2368999886432 23456788999999999 7999999999999999
Q ss_pred eeEEEEeccCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC
Q 040845 597 FKALVLEYMPHGSLEKYLHSSN---------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD 661 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~ 661 (824)
..+++|||+++|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEc
Confidence 9999999999999999987532 24788899999999999999999 99999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhh
Q 040845 662 DNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLK 740 (824)
Q Consensus 662 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~ 740 (824)
.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.... ..
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~ 243 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-----VE 243 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-----HH
Confidence 999999999999986643322222222334568999999998899999999999999999998 788876532 11
Q ss_pred hhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 040845 741 HWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSL 809 (824)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 809 (824)
.+....... .....+..++..+.+++.+||+.+|++||++.|+++.|+++....
T Consensus 244 ~~~~~~~~~---------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 244 ELFKLLKEG---------------HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHHHHHcC---------------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 111111000 000112234567899999999999999999999999999997544
No 206
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.5e-36 Score=323.43 Aligned_cols=241 Identities=21% Similarity=0.272 Sum_probs=193.2
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCC-CCcceeEEeeeecCCeeEEEE
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIR-HRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 602 (824)
+|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+..|..++..+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677899999999999999865 58999999987542 233456777888888885 577888999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++|+|.+++.... .+++.++..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~- 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG- 155 (323)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-
Confidence 9999999999987655 6899999999999999999999 9999999999999999999999999999987542221
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+ ... .
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~i---~~~--------~---- 217 (323)
T cd05615 156 -VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--ELFQSI---MEH--------N---- 217 (323)
T ss_pred -ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHH---HhC--------C----
Confidence 1223345899999999999888999999999999999999999999763211 111110 000 0
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINA 795 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~ 795 (824)
...+..++..+.+++.+||+.+|.+|+++
T Consensus 218 ----~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 218 ----VSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ----CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 00112345568899999999999999974
No 207
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=4.5e-39 Score=334.91 Aligned_cols=372 Identities=27% Similarity=0.391 Sum_probs=229.6
Q ss_pred CCCCcEEEccCCccc-ccccccccCCCCCCEEeCCCCcCCcccChhhhCcCCCceeeccCCccccccCccccCCCCCccE
Q 040845 20 ISNLKVLYLYNNRLQ-GEIIHEIGHLHNLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTNNSLSGCLSSITDVGLPNLEV 98 (824)
Q Consensus 20 l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~ 98 (824)
++-.+-.|+++|.++ +..|.+...+++++.|-|...++. .+|+.++.+.+|++|.+++|++..+-..... ||.|+.
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~vhGELs~--Lp~LRs 82 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLISVHGELSD--LPRLRS 82 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHhhhhhhcc--chhhHH
Confidence 334455555666555 345555555566666666555555 5555566666666666666655554444432 555555
Q ss_pred EEccCCeeee-ecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCCcCcccccccCCCCCCCcEEE
Q 040845 99 LYLWGNNFSG-TIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSSTLDLSFLSSLSNCKSLTHIS 177 (824)
Q Consensus 99 L~L~~n~i~~-~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~~L~~L~ 177 (824)
+.+..|++.. -+|..+..+..|+.|+|++|+++ ..|..+..-+++-+|+||+|+|.++|... +.+++.|-.||
T Consensus 83 v~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~l-----finLtDLLfLD 156 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSL-----FINLTDLLFLD 156 (1255)
T ss_pred HhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchH-----HHhhHhHhhhc
Confidence 5565555542 24555555666666666666665 44555555555666666666665555432 44555555555
Q ss_pred CcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEecCCccCCccchhhcCCCCCCEEEcccccC
Q 040845 178 LSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNKLNGSIPITLGKLQKLQDVDLEYNQL 257 (824)
Q Consensus 178 Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 257 (824)
||+|++... |..+..+..|++|.|++|.+...--..+..+++|+.|.+++.+-
T Consensus 157 LS~NrLe~L---------------------------PPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqR 209 (1255)
T KOG0444|consen 157 LSNNRLEML---------------------------PPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQR 209 (1255)
T ss_pred cccchhhhc---------------------------CHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccc
Confidence 555555432 33344455666666666665433233344555666666666553
Q ss_pred c-ccCCccccccCCccEEEccCccccccCCccccCCCCCcEEEcCCCCCCCCCCcccccccccccccccccccCcCCccc
Q 040845 258 E-GSIPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKVLSLGSNELTSIPLNFWSLKDILDLNLSSNCFSGPLPLEI 336 (824)
Q Consensus 258 ~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~ 336 (824)
+ .-+|.++..+.+|..++++.|.+. ..|+++.++++|+.|+||+|+|+++........+|++|+||+|+++ .+|.++
T Consensus 210 Tl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~av 287 (1255)
T KOG0444|consen 210 TLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAV 287 (1255)
T ss_pred hhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHH
Confidence 3 235566666666666666666666 6677777777777777777777777666666667777777777777 677777
Q ss_pred cccccchhhhccccccc-ccCCCccCCCCCCCeEEccCccccccCCccccccccccEEEccCcccCCCCcccccCCcccc
Q 040845 337 RNLKALIEIDFSMNNFS-GIIPMEIGSLKNLENLFLEYNRLEGSIPDSFGDLISLKSLNLSYNNLSGTIPVSLEKLSYLK 415 (824)
Q Consensus 337 ~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 415 (824)
.+++.|+.|.+.+|+++ .-+|..++.+.+|+.+..++|++. ..|+.+..|..|+.|.|+.|++- .+|+.+.-++.|+
T Consensus 288 cKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~ 365 (1255)
T KOG0444|consen 288 CKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLK 365 (1255)
T ss_pred hhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcc
Confidence 77777777777777764 235667777777777777777776 67777777777777777777776 7777777777777
Q ss_pred eeeccCCcccCCCCCC
Q 040845 416 DLNLSFNKLKGEIPRG 431 (824)
Q Consensus 416 ~L~l~~N~l~~~~p~~ 431 (824)
.||+..|+=--.+|..
T Consensus 366 vLDlreNpnLVMPPKP 381 (1255)
T KOG0444|consen 366 VLDLRENPNLVMPPKP 381 (1255)
T ss_pred eeeccCCcCccCCCCc
Confidence 7777777655555553
No 208
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.5e-36 Score=330.72 Aligned_cols=253 Identities=24% Similarity=0.331 Sum_probs=198.5
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|+..+.||+|+||.||+|+.+ +++.||+|+++... ......+..|+.++..++|++|+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999865 58999999987532 234566788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++..+.....
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 81 EFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred eCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence 9999999999997655 6889999999999999999999 99999999999999999999999999999875432110
Q ss_pred c---------------------------------cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCC
Q 040845 683 S---------------------------------MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPT 729 (824)
Q Consensus 683 ~---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~ 729 (824)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 0 0011346899999999999999999999999999999999999999
Q ss_pred cccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 040845 730 DELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRIN---AKEIVAK 801 (824)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt---~~evl~~ 801 (824)
......+ ...... ... .. ...+.....+..+.+++.+|+. ||++|++ +.|+++|
T Consensus 237 ~~~~~~~-~~~~i~----~~~------~~------~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 237 CSETPQE-TYRKVM----NWK------ET------LVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCHHH-HHHHHH----cCC------Cc------eecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 7532211 111100 000 00 0000011234567888888764 9999985 6777766
No 209
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.9e-36 Score=311.90 Aligned_cols=248 Identities=26% Similarity=0.395 Sum_probs=200.6
Q ss_pred ceeeeccceEEEEEEECC--C--cEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIRD--G--MEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|++|.||+|.+.+ + ..||||.+..... ...+.+..|+.++++++||||+++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998753 3 3699999876654 556788899999999999999999999988 889999999999
Q ss_pred CCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc-c
Q 040845 608 GSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM-T 685 (824)
Q Consensus 608 g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~ 685 (824)
++|.+++.... ..+++..++.++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||++..+....... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 99999997755 56899999999999999999999 9999999999999999999999999999998765433221 1
Q ss_pred cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchh
Q 040845 686 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
.....++..|+|||.+.+..++.++|||||||++|||++ |+.||......+ ....+....
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~----------------- 217 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKKIDKEG----------------- 217 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHhcC-----------------
Confidence 223456788999999988889999999999999999999 999986532111 111111000
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
.....+..++..+.+++.+||+.+|++||+++|+++.|.
T Consensus 218 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 218 ERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 000111234567899999999999999999999999875
No 210
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.6e-36 Score=323.89 Aligned_cols=248 Identities=22% Similarity=0.310 Sum_probs=195.4
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||.||+|+.. +++.||+|+++... ....+.+..|+.++.++ +||+|+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999865 57899999997542 23345677899999888 699999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQR-KLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--DTTS 154 (327)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC--Ccee
Confidence 99999887654 6899999999999999999999 9999999999999999999999999999987532211 1223
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccC-cchhhhhhhhhCCCcchhhccccccCchhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNG-EMTLKHWVNDCLPISTMEVVDANLLSQEDIH 766 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (824)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... ......+...... .. .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-------~~--------~ 219 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL-------EK--------P 219 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH-------hC--------C
Confidence 356899999999999999999999999999999999999999653221 1111111111000 00 0
Q ss_pred hhhHHHHHHHHHHHHHHccccCCCCCCCH------HHHHHH
Q 040845 767 FVAKEQCVSFVFNLALECTVESPEQRINA------KEIVAK 801 (824)
Q Consensus 767 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~------~evl~~ 801 (824)
...+...+..+.+++.+||+.||++|+++ .+++++
T Consensus 220 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 220 IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 00112345668899999999999999985 466554
No 211
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=7.5e-36 Score=311.87 Aligned_cols=252 Identities=26% Similarity=0.400 Sum_probs=191.4
Q ss_pred ceeeeccceEEEEEEECC---CcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCC
Q 040845 533 NLIGRGGFGSVYKARIRD---GMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHG 608 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 608 (824)
+.||+|+||.||+|.+.+ +..+|+|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998653 45799998865432 23356888999999999999999999999999999999999999
Q ss_pred CHHHHhhhCC----CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 609 SLEKYLHSSN----YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 609 ~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+|.+++.... ...++..+..++.|++.|++||| +.+++|+||||+||+++.++.+|++|||.+..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999997532 24567788899999999999999 9999999999999999999999999999997543332222
Q ss_pred ccccccccccccCccCcCCC-------CCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhcc
Q 040845 685 TQTQTLATIGYMAPEYGREG-------QVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVD 756 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~-------~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (824)
......++..|+|||++... .++.++||||||+++|||++ |+.||......+. ....+.. ......+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-~~~~~~~----~~~~~~~ 232 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV-LTYTVRE----QQLKLPK 232 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH-HHHHhhc----ccCCCCC
Confidence 22334567889999987532 35789999999999999996 9999865332211 1110000 0000011
Q ss_pred ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 757 ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
+.. ...++..+.+++..|| .+|++|||++|+++.|.
T Consensus 233 ~~~----------~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 233 PRL----------KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred Ccc----------CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 100 1123455788999999 68999999999998764
No 212
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=6.3e-36 Score=310.09 Aligned_cols=251 Identities=27% Similarity=0.444 Sum_probs=203.3
Q ss_pred ccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccC
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMP 606 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 606 (824)
.+|++.+.||+|+||.||+|.+.+++.+|+|.+... ......+.+|++++++++||+++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 467888999999999999998877889999988643 2234578899999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 040845 607 HGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQ 686 (824)
Q Consensus 607 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 686 (824)
+++|.+++......+++..+..++.|++.|++||| +.+++|+||||+||+++.++.++|+|||.+........ ...
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~~ 158 (256)
T cd05112 83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-TSS 158 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCcc-ccc
Confidence 99999999876556889999999999999999999 99999999999999999999999999999876532211 112
Q ss_pred ccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 687 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
....++.+|+|||...++.++.++||||+|+++|||++ |..||...... ..........
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~------------------ 218 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--EVVETINAGF------------------ 218 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHhCCC------------------
Confidence 22335678999999988889999999999999999998 88988652211 1111110000
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
+...+...+..+.+++.+||+.+|++|||+.|++++|
T Consensus 219 ~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 219 RLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 0000112346689999999999999999999999887
No 213
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.4e-36 Score=315.14 Aligned_cols=252 Identities=23% Similarity=0.315 Sum_probs=199.2
Q ss_pred hhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcC-CCCcceeEEeeeecC------C
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-RHRNLVKVISSCSNE------E 596 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------~ 596 (824)
+.+.|++.+.||+|+||.||+|... +++.||+|++.... .....+..|+.+++++ +|+||+++++++... .
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 4567888899999999999999865 58899999986543 3345778899999998 699999999998642 4
Q ss_pred eeEEEEeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccc
Q 040845 597 FKALVLEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 675 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 675 (824)
..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+|+|+|+||+||++++++.++|+|||++.
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence 6789999999999999988643 46889999999999999999999 8999999999999999999999999999998
Q ss_pred ccCCCCCccccccccccccccCccCcC-----CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCc
Q 040845 676 LLTGEDQSMTQTQTLATIGYMAPEYGR-----EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIS 750 (824)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 750 (824)
...... .......|+..|+|||++. ...++.++||||+||++|||++|+.||....... .+... ...
T Consensus 160 ~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~----~~~~~-~~~- 231 (272)
T cd06637 160 QLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----ALFLI-PRN- 231 (272)
T ss_pred eccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH----HHHHH-hcC-
Confidence 653221 1223356888999999875 3457889999999999999999999986532111 11000 000
Q ss_pred chhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 751 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.. .......++..+.+++.+||..+|++|||+.|++++
T Consensus 232 ----~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 232 ----PA---------PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred ----CC---------CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 00 000111345678999999999999999999999864
No 214
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2e-36 Score=322.96 Aligned_cols=194 Identities=26% Similarity=0.405 Sum_probs=170.4
Q ss_pred cCCCCceeeeccceEEEEEE-ECCCcEEEEEEeeccccchhhhHHHHHHHHhcCC-C-----CcceeEEeeeecCCeeEE
Q 040845 528 KFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIR-H-----RNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~l 600 (824)
+|++.++||+|+||.|.+|. .++++.||||+++.. .....+...|+.+|..++ | -|+|+++++|....+.|+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 78999999999999999996 456999999999865 344566778999999997 4 379999999999999999
Q ss_pred EEeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC--CCcEEEeeccccccc
Q 040845 601 VLEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD--NMVAHLSDFGIAKLL 677 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~--~~~~kl~Dfg~a~~~ 677 (824)
|+|.++ -+|.++++... ..++...++.|+.||+.||.+|| +.+|||+||||+|||+.+ ...+||+|||.|+..
T Consensus 266 VfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 999995 49999998766 57899999999999999999999 999999999999999964 448999999999875
Q ss_pred CCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcc
Q 040845 678 TGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDE 731 (824)
Q Consensus 678 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~ 731 (824)
...-. .++.+..|+|||++.+.+|+.+.||||||||++||++|.+-|.+
T Consensus 342 ~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 342 SQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred CCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 32221 45688899999999999999999999999999999999876654
No 215
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.4e-35 Score=315.90 Aligned_cols=265 Identities=22% Similarity=0.303 Sum_probs=204.5
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
++|++.+.||+|+||.||+|.+. ++..||+|.+..... .....+.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36889999999999999999865 588899998865432 2345688899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
+++++|.+++.... .+++..+..++.|+++|++||| + .+++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-- 154 (308)
T cd06615 81 MDGGSLDQVLKKAG-RIPENILGKISIAVLRGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-- 154 (308)
T ss_pred cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hhCCEEECCCChHHEEEecCCcEEEccCCCcccccccc--
Confidence 99999999998664 6889999999999999999999 6 589999999999999999999999999987543221
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcch-----------
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTM----------- 752 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----------- 752 (824)
.....++..|+|||.+.+..++.++|+||||+++|||++|+.||.... ......+..........
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 155 --ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD--AKELEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred --cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc--hhhHHHhhcCccccccccCCcccccCCC
Confidence 123468899999999888889999999999999999999999986432 11112111111000000
Q ss_pred ----------hhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 753 ----------EVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 753 ----------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
+..+.. ....... .....++.++.+++.+||..+|++|||+.|++++-.
T Consensus 231 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 289 (308)
T cd06615 231 PDSPRPMAIFELLDYI-VNEPPPK-LPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289 (308)
T ss_pred CCccchhhHHHHHHHH-hcCCCcc-CcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 000000 0000000 001125667999999999999999999999998843
No 216
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=8e-36 Score=311.03 Aligned_cols=252 Identities=23% Similarity=0.362 Sum_probs=202.3
Q ss_pred cCCCCceeeeccceEEEEEEECCCcEEEEEEeecccc------chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 528 KFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCG------RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
+|.+.+.||+|+||+||+|...+++.+|||.+..... .....+.+|+++++.++|+||+++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4788899999999999999888899999998864321 2235688899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||+++++|.+++.+.. .+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 81 MEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 99999999999997654 6788999999999999999999 8999999999999999999999999999987653211
Q ss_pred C----ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 682 Q----SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 682 ~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
. ........++..|+|||++.+..++.++||||+|+++||+++|+.||....... .......... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-~~~~~~~~~~---~------ 226 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-AMFYIGAHRG---L------ 226 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-HHHHhhhccC---C------
Confidence 1 111223458889999999998889999999999999999999999996532111 0000000000 0
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+..++..+.+++.+||..+|++||++.|++++
T Consensus 227 --------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 227 --------MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred --------CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000112346678999999999999999999998763
No 217
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.1e-37 Score=315.33 Aligned_cols=253 Identities=22% Similarity=0.326 Sum_probs=202.5
Q ss_pred ccCCCCceeeeccceEEEEEEECCCcEEEEEEeecc--ccchhhhHHHHHHHHhcCC-CCcceeEEeeeecCCeeEEEEe
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQ--CGRAFKSFDVECAMMKSIR-HRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 603 (824)
..|++.+.||.||.+.||++...+.+.||+|.+... +......|..|+..|.+|+ |.+||++++|-..++..|+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 568999999999999999999888888888876433 3455678999999999995 8999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|= ..+|..++...........+..+..|++.|+.+.| +.||||.|+||.|+++- .|.+||+|||+|..+......
T Consensus 441 ~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTs 515 (677)
T KOG0596|consen 441 CG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTS 515 (677)
T ss_pred cc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEeeeechhcccCccccc
Confidence 87 45999999877644443478899999999999999 99999999999999985 478999999999988877777
Q ss_pred cccccccccccccCccCcCCC-----------CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcch
Q 040845 684 MTQTQTLATIGYMAPEYGREG-----------QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTM 752 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 752 (824)
......+||+.|||||.+... ..+.++||||+|||+|+|+.|+.||...... |.+ ..
T Consensus 516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~------~aK------l~ 583 (677)
T KOG0596|consen 516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ------IAK------LH 583 (677)
T ss_pred eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH------HHH------HH
Confidence 777788999999999987532 2568899999999999999999999763211 111 01
Q ss_pred hhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 EVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.+.++...-... .. + -..++.++|+.|++.||.+|||..|++++
T Consensus 584 aI~~P~~~Iefp-~~--~--~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 584 AITDPNHEIEFP-DI--P--ENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred hhcCCCcccccc-CC--C--CchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 112221100000 00 0 12238999999999999999999999875
No 218
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.8e-36 Score=316.24 Aligned_cols=250 Identities=28% Similarity=0.356 Sum_probs=204.8
Q ss_pred ccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 527 DKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.+|++.+.||.|++|.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+|++++++++...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688899999999999999975 468999999987665555677889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
++++|.+++... .+++.++..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++........ .
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~--~ 171 (296)
T cd06655 99 AGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS--K 171 (296)
T ss_pred CCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc--c
Confidence 999999998754 5789999999999999999999 99999999999999999999999999999876543222 1
Q ss_pred cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 686 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
.....++..|+|||.+.+..++.++|||||||++|++++|+.||........ ...+... .. .
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~~~~~~~-~~----------------~ 233 (296)
T cd06655 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLIATN-GT----------------P 233 (296)
T ss_pred CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhc-CC----------------c
Confidence 2234578899999999888899999999999999999999999866322111 1100000 00 0
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+..++..+.+++.+||..||++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 234 ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 011122345678899999999999999999999864
No 219
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1e-35 Score=319.95 Aligned_cols=255 Identities=21% Similarity=0.260 Sum_probs=198.9
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++|+||+++++++.++...++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47889999999999999999865 58999999987431 223456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++|+|.+++......+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 999999999999876667899999999999999999999 99999999999999999999999999999876543222
Q ss_pred ccccccccccccccCccCcCC-----CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 683 SMTQTQTLATIGYMAPEYGRE-----GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
.......||+.|+|||++.. ..++.++||||+||++|||++|+.||...... ............
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~-----~~~~~i~~~~~~----- 226 (331)
T cd05597 158 -VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-----ETYGKIMNHKEH----- 226 (331)
T ss_pred -ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH-----HHHHHHHcCCCc-----
Confidence 12223458999999998863 45788999999999999999999998652211 111111000000
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQ--RINAKEIVAK 801 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~ 801 (824)
.... .....++..+.+++.+|+..++.+ |+++.+++++
T Consensus 227 --~~~~----~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 227 --FQFP----PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred --ccCC----CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0000 001124567888999987654443 8899999988
No 220
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.1e-36 Score=310.58 Aligned_cols=249 Identities=21% Similarity=0.283 Sum_probs=202.0
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
+|++.+.||+|+||.||+++.. ++..||+|.++... ....+.+..|+.+++.++|+||+++++++.++...++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4788899999999999999865 58999999986432 334567888999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 606 PHGSLEKYLHSS-NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 606 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
++++|.+++... ...+++..+..++.|++.|++||| +.+|+|+||||+||++++++.++++|||.+........
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-- 155 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA-- 155 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc--
Confidence 999999988653 345789999999999999999999 99999999999999999999999999999976543221
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchh
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
......++..|+|||.+.+..++.++|+||||+++|+|++|..||...... ...........
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~------------- 217 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK-----NLILKVCQGSY------------- 217 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH-----HHHHHHhcCCC-------------
Confidence 122345888999999998888999999999999999999999998752111 11100000000
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...+..++..+.+++.+||..||++|||+.|++..
T Consensus 218 --~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 218 --KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 00112345568899999999999999999999864
No 221
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.6e-36 Score=313.84 Aligned_cols=253 Identities=30% Similarity=0.455 Sum_probs=200.0
Q ss_pred CCCCceeeeccceEEEEEEECC-CcEEEEEEeeccccchh--hhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 529 FSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQCGRAF--KSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
|++.+.||+|+||+||+|+... ++.||+|++........ ....+|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 5678999999999999998764 67899999976643222 23345999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
++++|.+++.... .+++.++..++.|+++||+||| +.+++|+||||+||++++++.++|+|||.+... ......
T Consensus 81 ~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~--~~~~~~ 154 (260)
T PF00069_consen 81 PGGSLQDYLQKNK-PLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKL--SENNEN 154 (260)
T ss_dssp TTEBHHHHHHHHS-SBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEES--TSTTSE
T ss_pred ccccccccccccc-cccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc--cccccc
Confidence 9999999998433 6899999999999999999999 899999999999999999999999999999764 122223
Q ss_pred cccccccccccCccCcC-CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchh
Q 040845 686 QTQTLATIGYMAPEYGR-EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
.....++..|+|||++. +..++.++||||+|+++|+|++|..||..... ......... .......
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~--~~~~~~~~~------------~~~~~~~ 220 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS--DDQLEIIEK------------ILKRPLP 220 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--HHHHHHHHH------------HHHTHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc--hhhhhhhhh------------ccccccc
Confidence 34556899999999998 78899999999999999999999999886410 000000000 0000000
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
............+.+++.+||+.||++||++.|++++
T Consensus 221 ~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 221 SSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred ccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000111123679999999999999999999999864
No 222
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=8.7e-36 Score=309.19 Aligned_cols=249 Identities=29% Similarity=0.437 Sum_probs=199.1
Q ss_pred ceeeeccceEEEEEEECC----CcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIRD----GMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||.||+|.+.. +..||+|.+..... ...+.+..|+++++.+.|+||+++++++.. ...++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence 469999999999997542 26899999875533 245678889999999999999999998764 467899999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc-c
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT-Q 686 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-~ 686 (824)
|+|.+++.... .+++..+..++.|++.|++||| ..+++|+||||+||+++.++.+||+|||.+........... .
T Consensus 80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 99999998765 7899999999999999999999 99999999999999999999999999999986643332211 1
Q ss_pred ccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 687 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
....++..|+|||...+..++.++||||||+++||+++ |..||..... .....++....
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~------------------ 215 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGE------------------ 215 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCC------------------
Confidence 12224567999999988889999999999999999998 9999865321 12222221110
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
....+..++..+.+++.+||..+|++||++.++++.|+++.
T Consensus 216 ~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 216 RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 01112235667899999999999999999999999998763
No 223
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=4.1e-40 Score=327.04 Aligned_cols=422 Identities=25% Similarity=0.371 Sum_probs=291.3
Q ss_pred cccccccccCCcccccCCCCCcEEEccCCcccccccccccCCCCCCEEeCCCCcCCcccChhhhCcCCCceeeccCCccc
Q 040845 3 SIINNFLTSTTPKEIDNISNLKVLYLYNNRLQGEIIHEIGHLHNLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTNNSLS 82 (824)
Q Consensus 3 ~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 82 (824)
.+++|+++..+ ++++++..++.|+.++|++. .+|..++.+.+|..|+.++|.+. ++|+.++.+-.|..|+..+|+++
T Consensus 74 ~~~~n~l~~lp-~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~ 150 (565)
T KOG0472|consen 74 NVHDNKLSQLP-AAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS 150 (565)
T ss_pred EeccchhhhCC-HHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc
Confidence 34555554432 33555555555555555555 44555555555555555555554 44444555555555555555544
Q ss_pred cccCcccc---------------------CCCCCccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCC
Q 040845 83 GCLSSITD---------------------VGLPNLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNL 141 (824)
Q Consensus 83 ~~~~~~~~---------------------~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l 141 (824)
..|..+.+ ..++.|++||+..|-++ .+|..++.+.+|..|||..|+|. ..| .|.++
T Consensus 151 slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gc 227 (565)
T KOG0472|consen 151 SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGC 227 (565)
T ss_pred cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCcc
Confidence 44444332 01556666666666665 56666677777777777777776 444 66777
Q ss_pred CCCCEEEccCCcCCCCcCcccccccCCCCCCCcEEECcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCC
Q 040845 142 RNLEWLTLYDNNLTSSTLDLSFLSSLSNCKSLTHISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLT 221 (824)
Q Consensus 142 ~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~ 221 (824)
+.|++|+++.|+|..++.+ .++++.+|..|||.+|++...+.... +..+|..||+++|.|+ .+|.+++++
T Consensus 228 s~L~Elh~g~N~i~~lpae-----~~~~L~~l~vLDLRdNklke~Pde~c---lLrsL~rLDlSNN~is-~Lp~sLgnl- 297 (565)
T KOG0472|consen 228 SLLKELHVGENQIEMLPAE-----HLKHLNSLLVLDLRDNKLKEVPDEIC---LLRSLERLDLSNNDIS-SLPYSLGNL- 297 (565)
T ss_pred HHHHHHHhcccHHHhhHHH-----HhcccccceeeeccccccccCchHHH---HhhhhhhhcccCCccc-cCCcccccc-
Confidence 7777777777777666543 36678888888888888887765542 4567888888888887 567778888
Q ss_pred CCCEEEecCCccCCc--------------------------------------cchhh---cCCCCCCEEEcccccCccc
Q 040845 222 DLTTIVLGGNKLNGS--------------------------------------IPITL---GKLQKLQDVDLEYNQLEGS 260 (824)
Q Consensus 222 ~L~~L~L~~n~l~~~--------------------------------------~~~~~---~~l~~L~~L~L~~n~l~~~ 260 (824)
+|+.|-+.||.+.++ .+..| ..+.+.+.|+++.-+++ .
T Consensus 298 hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~ 376 (565)
T KOG0472|consen 298 HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-L 376 (565)
T ss_pred eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-c
Confidence 888888888877431 00111 12345677777777777 4
Q ss_pred CCccccccCC---ccEEEccCccccccCCccccCCCCC-cEEEcCCCCCCCCCCcccccccccccccccccccCcCCccc
Q 040845 261 IPDSICLSVE---LYELELGGNKLSGSIPACFSNMTFL-KVLSLGSNELTSIPLNFWSLKDILDLNLSSNCFSGPLPLEI 336 (824)
Q Consensus 261 ~~~~~~~~~~---L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~ 336 (824)
+|+....... ++..+++.|++. ..|..+..+..+ +.+.+++|.+.-+|..+..+++|..|+|++|.+. .+|..+
T Consensus 377 VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~ 454 (565)
T KOG0472|consen 377 VPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEM 454 (565)
T ss_pred CCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhh
Confidence 5554443333 888999999998 667767666654 4577888888888888899999999999999998 689999
Q ss_pred cccccchhhhcccccccccCCCccCCCCCCCeEEccCccccccCCccccccccccEEEccCcccCCCCcccccCCcccce
Q 040845 337 RNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEGSIPDSFGDLISLKSLNLSYNNLSGTIPVSLEKLSYLKD 416 (824)
Q Consensus 337 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 416 (824)
+.+..|+.|+++.|++. ..|..+..+..|+.+-.++|++....|..+..|.+|..|||.+|.|. .+|..+++|++|++
T Consensus 455 ~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~h 532 (565)
T KOG0472|consen 455 GSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRH 532 (565)
T ss_pred hhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeE
Confidence 99999999999999998 67888777788888888889998666666999999999999999998 99999999999999
Q ss_pred eeccCCcccCCCCCCCC-ccccccccccCCc
Q 040845 417 LNLSFNKLKGEIPRGGS-FGNFSAESFKGNE 446 (824)
Q Consensus 417 L~l~~N~l~~~~p~~~~-~~~~~~~~~~~n~ 446 (824)
|++.||+|. .++...- .+....+++.+++
T Consensus 533 LeL~gNpfr-~Pr~~iLmkgT~aiL~ylrdr 562 (565)
T KOG0472|consen 533 LELDGNPFR-QPRHQILMKGTAAILSYLRDR 562 (565)
T ss_pred EEecCCccC-CCHHHHhccChHHHHHHhccc
Confidence 999999998 3333222 2233344455543
No 224
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2e-36 Score=324.94 Aligned_cols=240 Identities=27% Similarity=0.315 Sum_probs=188.9
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHH-HHHHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVE-CAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E-~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||+||+|+.. +++.||+|++.... ......+..| ..+++.++|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999875 47889999987532 1222233334 4457888999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 ~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--~~~~ 154 (325)
T cd05602 81 GELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--GTTS 154 (325)
T ss_pred CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC--CCcc
Confidence 99999997654 6778888899999999999999 9999999999999999999999999999987543221 1223
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ....... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~~~~i~~--------~~~-------- 213 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-----MYDNILN--------KPL-------- 213 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH-----HHHHHHh--------CCc--------
Confidence 4568999999999999899999999999999999999999997532111 1111000 000
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINAKEIV 799 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl 799 (824)
..+...+..+.+++.+|++.||.+||++.+.+
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 214 QLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 01123456788999999999999999887543
No 225
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=6.1e-36 Score=325.51 Aligned_cols=267 Identities=22% Similarity=0.262 Sum_probs=198.0
Q ss_pred HhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecC-----
Q 040845 524 QATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNE----- 595 (824)
Q Consensus 524 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 595 (824)
...++|++.+.||+|+||.||+|... .++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 45678999999999999999999754 58899999986542 23345677899999999999999999988543
Q ss_pred -CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccc
Q 040845 596 -EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 674 (824)
Q Consensus 596 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 674 (824)
...++||||+++ ++.+.+.. .+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCccc
Confidence 357899999965 67776653 4788899999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhC-CC----
Q 040845 675 KLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCL-PI---- 749 (824)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~---- 749 (824)
+..... .......+|..|+|||++.+..++.++||||+||++|||++|+.||.+....+. ....+.... +.
T Consensus 167 ~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~ 242 (355)
T cd07874 167 RTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFM 242 (355)
T ss_pred ccCCCc---cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHH
Confidence 764322 122345689999999999988899999999999999999999999975321110 000000000 00
Q ss_pred -----cchhhcc----------ccccCch--hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 750 -----STMEVVD----------ANLLSQE--DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 750 -----~~~~~~~----------~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
......+ +...... ......+......+.+++.+|++.||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0000000 0000000 00000111234568999999999999999999999987
No 226
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=8.9e-36 Score=311.10 Aligned_cols=250 Identities=26% Similarity=0.400 Sum_probs=201.3
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccc---------hhhhHHHHHHHHhcCCCCcceeEEeeeecCCe
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGR---------AFKSFDVECAMMKSIRHRNLVKVISSCSNEEF 597 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 597 (824)
+|.+...||+|++|.||+|... +++.||+|.+...... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4778899999999999999864 5889999988644221 23567889999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 040845 598 KALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 677 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 677 (824)
.++||||+++++|.+++.... .+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||.+...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 999999999999999997754 6788899999999999999999 999999999999999999999999999999876
Q ss_pred CCCCCcc----ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchh
Q 040845 678 TGEDQSM----TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTME 753 (824)
Q Consensus 678 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (824)
....... ......++..|+|||.+.+..++.++||||+|+++|+|++|+.||....... ..... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~-~~-------- 226 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-AIFKI-GE-------- 226 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH-HHHHH-hc--------
Confidence 5322111 1122347889999999988889999999999999999999999987532111 00000 00
Q ss_pred hccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 754 VVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
. .....+..++..+.+++.+||+.||.+||++.|++++
T Consensus 227 ~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 227 N----------ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred c----------CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 0 0001112346678999999999999999999999864
No 227
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.4e-36 Score=313.35 Aligned_cols=238 Identities=24% Similarity=0.357 Sum_probs=188.6
Q ss_pred eeeeccceEEEEEEECC-------------------------CcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeE
Q 040845 534 LIGRGGFGSVYKARIRD-------------------------GMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKV 588 (824)
Q Consensus 534 ~lg~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 588 (824)
+||+|+||.||+|.+.. ...||+|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 13588998865544445678889999999999999999
Q ss_pred EeeeecCCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC----
Q 040845 589 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM---- 664 (824)
Q Consensus 589 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~---- 664 (824)
++++.+....++||||+++|+|..++......+++..+..++.|+++|++||| +.+|+||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccCcccC
Confidence 99999999999999999999999999776557899999999999999999999 99999999999999997643
Q ss_pred ---cEEEeecccccccCCCCCccccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHH-hCCCCCcccccCcchh
Q 040845 665 ---VAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETF-TRKKPTDELFNGEMTL 739 (824)
Q Consensus 665 ---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~-tg~~p~~~~~~~~~~~ 739 (824)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++||++ +|+.||......+ .
T Consensus 159 ~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~ 230 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--K 230 (274)
T ss_pred ccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--H
Confidence 4899999987643221 12346788999998865 56899999999999999995 6888886532211 1
Q ss_pred hhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 740 KHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
..+..... . .+......+.+++.+||+.+|++|||+.++++.|
T Consensus 231 ~~~~~~~~------------~--------~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 231 ERFYEKKH------------R--------LPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHHhcc------------C--------CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 11111000 0 0011234588999999999999999999999887
No 228
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-35 Score=315.20 Aligned_cols=251 Identities=27% Similarity=0.339 Sum_probs=204.9
Q ss_pred hccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 526 TDKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
..+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++..++..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 36789999999999999999986 46899999998765555567788899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+++++|.+++... .+++.++..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.+........
T Consensus 98 ~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~-- 170 (297)
T cd06656 98 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 170 (297)
T ss_pred cCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc--
Confidence 9999999998654 4788899999999999999999 99999999999999999999999999999876543221
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchh
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
......+++.|+|||...+..++.++|+|||||++|++++|+.||............+.. . .
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~----------------~--~ 232 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN----------------G--T 232 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC----------------C--C
Confidence 122345788999999998888999999999999999999999999653211110000000 0 0
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....+...+..+.+++.+||..+|++||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 233 PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000122345668899999999999999999999884
No 229
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1e-35 Score=312.44 Aligned_cols=249 Identities=24% Similarity=0.324 Sum_probs=198.6
Q ss_pred ccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 527 DKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
++|++.++||+|+||.||+|.. .+++.||+|++.... ....+.+..|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3678889999999999999975 468999999986542 23345688899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+++++|..+. .+++..+..++.|++.|++||| +.+|+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---- 148 (279)
T cd06619 81 MDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---- 148 (279)
T ss_pred CCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----
Confidence 9999997653 4678889999999999999999 999999999999999999999999999999765322
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchh--hhhhhhhCCCcchhhccccccCc
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTL--KHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
......++..|+|||.+.+..++.++||||||+++|||++|+.||.......... ..+....... ..+.
T Consensus 149 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~---- 219 (279)
T cd06619 149 IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE-----DPPV---- 219 (279)
T ss_pred cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc-----CCCC----
Confidence 1223468899999999998889999999999999999999999997643221110 0111000000 0000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
......+.++.+++.+||..+|++||+++|++++
T Consensus 220 -----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 220 -----LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred -----CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0011234568899999999999999999999886
No 230
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-37 Score=320.15 Aligned_cols=245 Identities=30% Similarity=0.431 Sum_probs=203.8
Q ss_pred CCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 529 FSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
|.-.+-||.|+||.||.|++ .+...||||.+.... .+.+.++..|+.+|++++|||++.+.|+|-.+.+.++||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 55567899999999999985 457899999986443 34577899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
| -|+-.|.+.-..+++.+-++..|..+.++||+||| +.+.||||||+.|||+++.|.||++|||.|....+.
T Consensus 108 C-lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA---- 179 (948)
T KOG0577|consen 108 C-LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA---- 179 (948)
T ss_pred H-hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCch----
Confidence 9 56888888888888999999999999999999999 999999999999999999999999999999876432
Q ss_pred ccccccccccccCccCcC---CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 685 TQTQTLATIGYMAPEYGR---EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
...+||+.|||||++. .|.|+-++||||+|+...|+...++|.-.+ .....+.+++....| .+
T Consensus 180 --nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM-NAMSALYHIAQNesP---------tL-- 245 (948)
T KOG0577|consen 180 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNESP---------TL-- 245 (948)
T ss_pred --hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc-hHHHHHHHHHhcCCC---------CC--
Confidence 3467999999999774 678999999999999999999999996542 111122222221111 11
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
+....+..+.+++..|++.-|.+|||.+++++|-
T Consensus 246 -------qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 246 -------QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred -------CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 1234577899999999999999999999998763
No 231
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.3e-35 Score=312.48 Aligned_cols=250 Identities=22% Similarity=0.334 Sum_probs=200.0
Q ss_pred CCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc---chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 529 FSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG---RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
|+..+.||+|+||.||+|.+. +++.||||.+..... .....+..|+.++++++|++++.+++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999865 589999998865421 2234567899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
+++++|.+++.... ..+++.++..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++........
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 157 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 157 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc-
Confidence 99999999986543 46889999999999999999999 99999999999999999999999999999876432221
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
.....|+..|+|||++.+..++.++||||+||++|||++|+.||....... ....+ .. ..+. .
T Consensus 158 --~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~~~-~~--------~~~~-~---- 220 (285)
T cd05630 158 --IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEV-ER--------LVKE-V---- 220 (285)
T ss_pred --ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHHHH-Hh--------hhhh-h----
Confidence 123468999999999998899999999999999999999999997632211 00000 00 0000 0
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRIN-----AKEIVAK 801 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~ 801 (824)
....+..++..+.+++.+||+.||++||| +.|++++
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 221 --QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred --hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 00011234567899999999999999999 8898875
No 232
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2e-36 Score=324.90 Aligned_cols=239 Identities=29% Similarity=0.343 Sum_probs=188.9
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHH-HHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECA-MMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||.||+|+.. +|+.||+|++.... ......+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999864 58999999987542 122334445544 57789999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++.... .+++.++..++.||+.|++||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~ 154 (325)
T cd05604 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS--DTTT 154 (325)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC--CCcc
Confidence 99999887654 7899999999999999999999 9999999999999999999999999999987532211 1223
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... ........ ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----~~~~~~~~--------~~~-------- 213 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-----EMYDNILH--------KPL-------- 213 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-----HHHHHHHc--------CCc--------
Confidence 456899999999999999999999999999999999999998653211 11111000 000
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINAKEI 798 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ev 798 (824)
..+...+..+.+++.+|+..+|++||++.+.
T Consensus 214 ~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~ 244 (325)
T cd05604 214 VLRPGASLTAWSILEELLEKDRQRRLGAKED 244 (325)
T ss_pred cCCCCCCHHHHHHHHHHhccCHHhcCCCCCC
Confidence 0011235567899999999999999988643
No 233
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=307.80 Aligned_cols=248 Identities=25% Similarity=0.359 Sum_probs=208.6
Q ss_pred ccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 527 DKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
.=|+..+.||+|.|+.|-.|++ =+|.+||||++.+.. .-....+.+|+..|+-++|||||++|.+.......|+|.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 4578888999999999999974 479999999997653 2345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee-CCCCcEEEeecccccccCCCCC
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL-DDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill-~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
.-++|+|.+|+..+...+.+.-+.+++.||+.|+.|+| +..+||||+||+||.+ .+-|-+|++|||++-.+.+...
T Consensus 98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k 174 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK 174 (864)
T ss_pred ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCCcch
Confidence 99999999999988889999999999999999999999 9999999999999876 5789999999999987765443
Q ss_pred ccccccccccccccCccCcCCCCCC-ccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVS-TNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
.+..+|+..|-|||++.+..|+ +++||||+|||+|-+++|++||...-+.+. +- .++|=
T Consensus 175 ---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-LT------------mImDC---- 234 (864)
T KOG4717|consen 175 ---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-LT------------MIMDC---- 234 (864)
T ss_pred ---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-hh------------hhhcc----
Confidence 3445799999999999999885 678999999999999999999986332221 11 11111
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....|...+.++.+||..|+..||.+|.+.+||+.+
T Consensus 235 ----KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 235 ----KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred ----cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 112334567788999999999999999999998764
No 234
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.9e-35 Score=312.36 Aligned_cols=266 Identities=27% Similarity=0.328 Sum_probs=195.9
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcC---CCCcceeEEeeeec-----CC
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSI---RHRNLVKVISSCSN-----EE 596 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~~ 596 (824)
+|++.+.||+|+||+||+|+.+ +++.||+|.++.... .....+.+|+++++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4888899999999999999865 589999999865422 2233456677777766 69999999998754 34
Q ss_pred eeEEEEeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccc
Q 040845 597 FKALVLEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 675 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 675 (824)
..++||||++ ++|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 5789999997 48988887643 45899999999999999999999 9999999999999999999999999999998
Q ss_pred ccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhC-CCc--ch
Q 040845 676 LLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCL-PIS--TM 752 (824)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~--~~ 752 (824)
...... ......++..|+|||++.+..++.++||||+||++|||++|++||...... ........... +.. ..
T Consensus 157 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 157 IYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred cccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHHhCCCChhhCc
Confidence 654221 123345789999999998888999999999999999999999998653221 11111111100 000 00
Q ss_pred hhcc--ccccCchhh--hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 EVVD--ANLLSQEDI--HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 ~~~~--~~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.... ......... .......++..+.+++.+|++.||++|||+.|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 000000000 001112456678999999999999999999999864
No 235
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=9.6e-36 Score=311.15 Aligned_cols=248 Identities=28% Similarity=0.473 Sum_probs=195.3
Q ss_pred ceeeeccceEEEEEEECC-Cc--EEEEEEeeccc-cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIRD-GM--EVAVKVFNLQC-GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||.||+|+.++ +. .+|+|.++... ....+.+..|++++.++ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999998754 43 46888876432 33456788899999999 799999999999999999999999999
Q ss_pred CCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecc
Q 040845 608 GSLEKYLHSSN---------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 672 (824)
Q Consensus 608 g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 672 (824)
|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCC
Confidence 99999987532 24788999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcc
Q 040845 673 IAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPIST 751 (824)
Q Consensus 673 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 751 (824)
++.... ..........+..|+|||+.....++.++|||||||++|||++ |..||...... ..........
T Consensus 158 l~~~~~---~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~~~~~~- 228 (270)
T cd05047 158 LSRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEKLPQGY- 228 (270)
T ss_pred Cccccc---hhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----HHHHHHhCCC-
Confidence 986321 1111112234667999999988889999999999999999997 99998653211 1111110000
Q ss_pred hhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 752 MEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
....+..++..+.+++.+||..+|.+|||+.|+++.|+++.
T Consensus 229 --------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 --------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred --------------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 00011234567899999999999999999999999998764
No 236
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.2e-35 Score=316.16 Aligned_cols=194 Identities=23% Similarity=0.347 Sum_probs=160.4
Q ss_pred CceeeeccceEEEEEEEC---CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeec--CCeeEEEEeccC
Q 040845 532 NNLIGRGGFGSVYKARIR---DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSN--EEFKALVLEYMP 606 (824)
Q Consensus 532 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 606 (824)
.++||+|+||+||+|+.+ +++.||+|.+... .....+.+|++++++++||||+++++++.. +...++||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999865 4678999988643 233457789999999999999999998854 467889999995
Q ss_pred CCCHHHHhhhCC--------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee----CCCCcEEEeecccc
Q 040845 607 HGSLEKYLHSSN--------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL----DDNMVAHLSDFGIA 674 (824)
Q Consensus 607 ~g~L~~~l~~~~--------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~Dfg~a 674 (824)
++|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||++ +.++.+||+|||+|
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 58888875321 25788999999999999999999 9999999999999999 46689999999999
Q ss_pred cccCCCCCc-cccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcc
Q 040845 675 KLLTGEDQS-MTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDE 731 (824)
Q Consensus 675 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~ 731 (824)
..+...... .......+|+.|+|||++.+. .++.++||||+||++|||++|++||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 876433221 222345689999999988764 589999999999999999999999965
No 237
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.2e-36 Score=324.26 Aligned_cols=263 Identities=19% Similarity=0.213 Sum_probs=196.6
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
..+|++.+.||+|+||.||+|+.. +++.||+|+... .....|+.++++++|+||+++++++......++||||
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 138 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH 138 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence 457999999999999999999875 478899997432 2235699999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+ .++|.+++......+++.++..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 139 ~-~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 211 (357)
T PHA03209 139 Y-SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP--- 211 (357)
T ss_pred c-CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccccCc---
Confidence 9 46899998776667999999999999999999999 9999999999999999999999999999987532211
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCc---------chhhhhhhhhC--CCcc--
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGE---------MTLKHWVNDCL--PIST-- 751 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~---------~~~~~~~~~~~--~~~~-- 751 (824)
......||..|+|||++.+..++.++|||||||++|||+++..|+....... ..+...+.... +...
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 291 (357)
T PHA03209 212 AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPR 291 (357)
T ss_pred ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCC
Confidence 1223458999999999999899999999999999999999665543221111 01111111100 0000
Q ss_pred -------hhhccccccC-c--hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 752 -------MEVVDANLLS-Q--EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 752 -------~~~~~~~~~~-~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+..... . ..........++..+.+++.+||+.||++||||.|+++|
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 292 DPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred CCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 0000000000 0 000011112345567789999999999999999999875
No 238
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.1e-35 Score=308.84 Aligned_cols=253 Identities=25% Similarity=0.440 Sum_probs=204.7
Q ss_pred hccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.++|++.+.||+|+||.||+|.+.++..||+|.+... ....+.+.+|++++++++|+||+++++++.+ ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 4678999999999999999999877888999987643 2345678889999999999999999999887 7789999999
Q ss_pred CCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 606 PHGSLEKYLHSS-NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 606 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
++++|.+++... ....++.++..++.|++.|++||| +.+++|+||+|+||+++.++.+|++|||.+........ .
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~ 158 (260)
T cd05073 83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-T 158 (260)
T ss_pred CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc-c
Confidence 999999999763 346788899999999999999999 89999999999999999999999999999976543221 1
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
......++..|+|||++..+.++.++|+|||||++|++++ |+.||...... ....+......
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~--------------- 221 (260)
T cd05073 159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYR--------------- 221 (260)
T ss_pred cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhCCCC---------------
Confidence 2223345678999999988889999999999999999999 88888653211 11111111100
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
...+...+.++.+++.+||+.+|++||++.++.+.|+.
T Consensus 222 ---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 222 ---MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 00112345678999999999999999999999999875
No 239
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.4e-36 Score=322.67 Aligned_cols=237 Identities=27% Similarity=0.320 Sum_probs=187.2
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHH-HHHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVEC-AMMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||.||+|+.. +++.||+|++.... ......+..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999875 58899999986532 12233344444 468889999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (321)
T cd05603 81 GELFFHLQRER-CFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--ETTS 154 (321)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--Cccc
Confidence 99998887654 6788899999999999999999 9999999999999999999999999999987532221 1223
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...||+.|+|||.+.+..++.++||||+||++|||++|+.||..... .......... . .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~--------~--------~ 213 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-----SQMYDNILHK--------P--------L 213 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-----HHHHHHHhcC--------C--------C
Confidence 45689999999999988899999999999999999999999965311 1111111100 0 0
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINAK 796 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ 796 (824)
..+...+..+.+++.+|++.||.+||++.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 214 QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 01122355688999999999999999764
No 240
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.4e-35 Score=312.34 Aligned_cols=250 Identities=22% Similarity=0.309 Sum_probs=198.8
Q ss_pred CCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 529 FSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
|+..+.||+|+||+||+|.+. +++.||+|.+.... ......+.+|+++++.++|++|+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 666789999999999999865 58899999986542 12234567899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
+++++|.+++.... ..+++..+..++.|++.|+.||| +.+|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-- 156 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence 99999998886543 46899999999999999999999 9999999999999999999999999999987643221
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
......|+..|+|||.+.+..++.++|+||+||++|||++|+.||....... ....+.......
T Consensus 157 -~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-~~~~~~~~~~~~-------------- 220 (285)
T cd05632 157 -SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-KREEVDRRVLET-------------- 220 (285)
T ss_pred -cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhhcc--------------
Confidence 1223468999999999988889999999999999999999999997532211 111111100000
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRIN-----AKEIVAK 801 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~ 801 (824)
....+..++..+.+++.+||+.||++||+ +.+++++
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 221 --EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred --ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 00011234566889999999999999999 6666664
No 241
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1e-35 Score=313.66 Aligned_cols=268 Identities=26% Similarity=0.306 Sum_probs=200.6
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|++.+.||+|+||.||+|+.. +|+.||+|+++... ......+.+|++++++++|+||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999875 58999999986542 22235677899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
++ ++|.+++......+++..+..++.||++|++||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-- 154 (284)
T cd07839 81 CD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR-- 154 (284)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC--
Confidence 96 5888888765557899999999999999999999 99999999999999999999999999999986532221
Q ss_pred ccccccccccccCccCcCCCC-CCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcc------hhhccc
Q 040845 685 TQTQTLATIGYMAPEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIST------MEVVDA 757 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 757 (824)
......++..|+|||.+.+.. ++.++||||+||++|||+||+.|+.........+............ ....+.
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 123345788999999887654 6899999999999999999999865422221111111110000000 000000
Q ss_pred ccc---CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 758 NLL---SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 758 ~~~---~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
... ............++.++.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 000 00000001112356778999999999999999999999875
No 242
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1e-35 Score=314.06 Aligned_cols=261 Identities=23% Similarity=0.303 Sum_probs=202.9
Q ss_pred cHHHHHHhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcC-CCCcceeEEeeee--
Q 040845 518 SYLELFQATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-RHRNLVKVISSCS-- 593 (824)
Q Consensus 518 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~-- 593 (824)
.++.+..+.++|++.+.||+|+||.||+|... +++.||+|++... ......+..|+.+++++ +|+||+++++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 34555667889999999999999999999865 4889999987643 23345678899999999 6999999999873
Q ss_pred ---cCCeeEEEEeccCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEE
Q 040845 594 ---NEEFKALVLEYMPHGSLEKYLHS---SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAH 667 (824)
Q Consensus 594 ---~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 667 (824)
.+...++||||+++++|.+++.. ....+++..+..++.|+++|+.||| +.+++||||||+||++++++.++
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEE
Confidence 34578999999999999998753 2246788899999999999999999 99999999999999999999999
Q ss_pred EeecccccccCCCCCccccccccccccccCccCcCC-----CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhh
Q 040845 668 LSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHW 742 (824)
Q Consensus 668 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~ 742 (824)
++|||++........ ......|+..|+|||++.. ..++.++||||+||++|||++|+.||........ ...+
T Consensus 165 l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~-~~~~ 241 (286)
T cd06638 165 LVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA-LFKI 241 (286)
T ss_pred EccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-Hhhc
Confidence 999999886543221 2233458899999998753 4578899999999999999999999865321110 0000
Q ss_pred hhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 743 VNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
... .......+..++..+.+++.+||+.||++|||+.|++++.
T Consensus 242 ~~~-----------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 242 PRN-----------------PPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred ccc-----------------CCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 000 0000011122345688999999999999999999999864
No 243
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.8e-35 Score=332.73 Aligned_cols=268 Identities=22% Similarity=0.290 Sum_probs=194.4
Q ss_pred HHHhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCC------cceeEEeeeec
Q 040845 522 LFQATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHR------NLVKVISSCSN 594 (824)
Q Consensus 522 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~ 594 (824)
+....++|++.+.||+|+||+||+|... +++.||||+++... .....+..|+++++.++|. +++.+++++..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3445688999999999999999999864 57899999986432 2334556688888777654 58889888876
Q ss_pred C-CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEecCCCCCCeeeCCCC--------
Q 040845 595 E-EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNM-------- 664 (824)
Q Consensus 595 ~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlk~~Nill~~~~-------- 664 (824)
+ .+.++|||++ +++|.+++...+ .+++..+..++.||+.||+||| + .+|+||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcccccccc
Confidence 4 5788999998 778999887654 6899999999999999999999 7 5999999999999998765
Q ss_pred --------cEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCc
Q 040845 665 --------VAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGE 736 (824)
Q Consensus 665 --------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~ 736 (824)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+.....+
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~ 352 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLE 352 (467)
T ss_pred cccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 49999999876422 12234568999999999999999999999999999999999999997532211
Q ss_pred chhh-----------hhhhhhCCCcchhhcccccc-----Cchh------hhhhhHHHHHHHHHHHHHHccccCCCCCCC
Q 040845 737 MTLK-----------HWVNDCLPISTMEVVDANLL-----SQED------IHFVAKEQCVSFVFNLALECTVESPEQRIN 794 (824)
Q Consensus 737 ~~~~-----------~~~~~~~~~~~~~~~~~~~~-----~~~~------~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt 794 (824)
.+. .|..........+.++.... .... ............+.+|+.+||+.||++|||
T Consensus 353 -~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t 431 (467)
T PTZ00284 353 -HLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLN 431 (467)
T ss_pred -HHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCC
Confidence 000 01100000000000000000 0000 000000112456889999999999999999
Q ss_pred HHHHHHH
Q 040845 795 AKEIVAK 801 (824)
Q Consensus 795 ~~evl~~ 801 (824)
++|+++|
T Consensus 432 a~e~L~H 438 (467)
T PTZ00284 432 ARQMTTH 438 (467)
T ss_pred HHHHhcC
Confidence 9999975
No 244
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=9.9e-36 Score=311.10 Aligned_cols=248 Identities=30% Similarity=0.491 Sum_probs=198.1
Q ss_pred ceeeeccceEEEEEEECC-------CcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 533 NLIGRGGFGSVYKARIRD-------GMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+.||+|+||.||+|++.+ +..||+|.+.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998653 2579999875432 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-----cEEEeeccc
Q 040845 605 MPHGSLEKYLHSSN------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-----VAHLSDFGI 673 (824)
Q Consensus 605 ~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-----~~kl~Dfg~ 673 (824)
+++++|.+++.... ..+++.++..++.|++.|++||| +.+++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997532 34788999999999999999999 89999999999999999877 899999999
Q ss_pred ccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcch
Q 040845 674 AKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTM 752 (824)
Q Consensus 674 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 752 (824)
+................++..|+|||++.++.++.++|||||||++|||++ |+.||..... .....++...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~------ 229 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQHVTAG------ 229 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHHHhcC------
Confidence 986643332222223345778999999999999999999999999999998 9999864221 1111111100
Q ss_pred hhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 753 EVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
.....+..++..+.+++.+||..+|++||++.++++.|+
T Consensus 230 ------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 230 ------------GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ------------CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 011112345677899999999999999999999999886
No 245
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.1e-35 Score=307.61 Aligned_cols=248 Identities=25% Similarity=0.378 Sum_probs=203.7
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
..|+..+.||+|+||.||+|.+. +++.||+|++.... ......+..|+.+++.++|+||+++++++.++...++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 35677789999999999999875 58899999987543 34456788899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+++++|.+++... .+++.++..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 84 ~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-- 156 (277)
T cd06640 84 LGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-- 156 (277)
T ss_pred CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc--
Confidence 9999999998753 5788899999999999999999 99999999999999999999999999999976543221
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchh
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
......++..|+|||++.+..++.++|+|||||++|||++|..||......... . .....
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~--~------------~~~~~------ 216 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL--F------------LIPKN------ 216 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh--h------------hhhcC------
Confidence 122345788999999998888999999999999999999999998753221110 0 00000
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....+..++..+.+++.+||..+|++||++.+++++
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 217 NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0011123456778999999999999999999999887
No 246
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.1e-35 Score=320.03 Aligned_cols=255 Identities=18% Similarity=0.244 Sum_probs=199.4
Q ss_pred ccCCCCceeeeccceEEEEEEECC-CcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||+||+++.+. ++.||+|++.... ......+.+|+.++..++|++|+++++++.++...++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 468899999999999999998764 7889999986431 223345788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++|+|.+++.+....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 999999999999876557899999999999999999999 99999999999999999999999999999876532221
Q ss_pred ccccccccccccccCccCcC-----CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 683 SMTQTQTLATIGYMAPEYGR-----EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||..... .............
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~-----~~~~~~i~~~~~~----- 226 (332)
T cd05623 158 -VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHKER----- 226 (332)
T ss_pred -ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH-----HHHHHHHhCCCcc-----
Confidence 2223356899999999875 34678999999999999999999999975211 1111111000000
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQ--RINAKEIVAK 801 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~ 801 (824)
.. .......++..+.+++.+|+..++.+ |+++.|++++
T Consensus 227 --~~----~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 227 --FQ----FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred --cc----CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 00 00011234667889999988665544 7899999988
No 247
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.9e-35 Score=309.85 Aligned_cols=249 Identities=27% Similarity=0.376 Sum_probs=203.4
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
++|++.+.||.|++|.||+|+.. +++.||+|++.... ......+.+|+++++.++|+||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36888899999999999999865 58999999987553 33456788899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+++++|.+++... .+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++++|||.++...... .
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~ 153 (274)
T cd06609 81 CGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--S 153 (274)
T ss_pred eCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc--c
Confidence 9999999999765 6889999999999999999999 9999999999999999999999999999998764332 1
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchh
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
......++..|+|||.+.+..++.++||||||+++|||+||+.||........ ...+....+ +..
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~--~~~~~~~~~--------~~~----- 218 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV--LFLIPKNNP--------PSL----- 218 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH--HHHhhhcCC--------CCC-----
Confidence 22334578899999999988899999999999999999999999865321110 000000000 000
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....++..+.+++.+||..+|++|||+++++++
T Consensus 219 ----~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 219 ----EGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred ----cccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 000145678899999999999999999999874
No 248
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.8e-35 Score=322.80 Aligned_cols=267 Identities=21% Similarity=0.229 Sum_probs=198.2
Q ss_pred HhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecC-----
Q 040845 524 QATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNE----- 595 (824)
Q Consensus 524 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 595 (824)
...++|++.+.||+|+||.||+|... .++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 34678999999999999999999864 58899999986532 23345677899999999999999999987543
Q ss_pred -CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccc
Q 040845 596 -EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 674 (824)
Q Consensus 596 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 674 (824)
...++||||+++ ++.+++.. .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 357999999965 77777753 4788899999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCC-Cc-ch
Q 040845 675 KLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLP-IS-TM 752 (824)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~-~~ 752 (824)
+..... .......+|..|+|||++.+..++.++||||+||++|||++|+.||......+ .....+..... .. ..
T Consensus 174 ~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 249 (364)
T cd07875 174 RTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFM 249 (364)
T ss_pred cccCCC---CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHH
Confidence 764321 12234568999999999999899999999999999999999999997532111 11111110000 00 00
Q ss_pred hhcccc----------c--------cCc--hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 EVVDAN----------L--------LSQ--EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 ~~~~~~----------~--------~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+. . ... ..............+.+++.+|++.||.+|||+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 0 000 000000011124568899999999999999999999986
No 249
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.3e-35 Score=310.00 Aligned_cols=267 Identities=25% Similarity=0.299 Sum_probs=199.4
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|++.+.||+|++|.||+|+.+ ++..||+|.++... ......+.+|+.+++.++||||+++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4788899999999999999865 58999999986542 22345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 605 MPHGSLEKYLHSSN--YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 605 ~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
++ ++|.+++.... ..+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 97 68988886533 46899999999999999999999 9999999999999999999999999999987543221
Q ss_pred ccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCc--------chh
Q 040845 683 SMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIS--------TME 753 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~ 753 (824)
.......++..|+|||.+.+. .++.++||||+||++|||+||+.||........ ............ ...
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ-LFRIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCChhhhhcchhhH
Confidence 122334578899999987654 478999999999999999999999875322111 000000000000 000
Q ss_pred hccccccCch-hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 754 VVDANLLSQE-DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 754 ~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.......... .........++.++.+++.+||..||++|||+.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 234 DYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000000 00000112356778999999999999999999999864
No 250
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.3e-35 Score=317.14 Aligned_cols=267 Identities=20% Similarity=0.290 Sum_probs=196.7
Q ss_pred CCceeeec--cceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 531 ENNLIGRG--GFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 531 ~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
+.++||+| +||+||+++.+ +|+.||+|+++... ....+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 68899999764 68999999987542 233456778999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 606 PHGSLEKYLHSS-NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 606 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+..........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999999999654 245899999999999999999999 9999999999999999999999999998765432211110
Q ss_pred -----ccccccccccccCccCcCC--CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcc------
Q 040845 685 -----TQTQTLATIGYMAPEYGRE--GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIST------ 751 (824)
Q Consensus 685 -----~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------ 751 (824)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||............ .....+...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 237 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK-LNGTVPCLLDTTTIP 237 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHH-hcCCccccccccchh
Confidence 1112346778999999875 35889999999999999999999999753322111111 110000000
Q ss_pred hhh---------ccc-----ccc------CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 752 MEV---------VDA-----NLL------SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 752 ~~~---------~~~-----~~~------~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.+. .+. ... ............+++.+.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 000 000 000 00000001122356789999999999999999999999875
No 251
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.8e-35 Score=308.92 Aligned_cols=267 Identities=25% Similarity=0.335 Sum_probs=202.0
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
++|+..+.||+|+||.||+|+.+ +|+.||+|++..... ...+.+.+|+.+++.++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888999999999999999876 589999999864422 233567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|++++.+..+..... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~- 155 (286)
T cd07847 81 YCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD- 155 (286)
T ss_pred ccCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCcc-
Confidence 999988888775543 6899999999999999999999 89999999999999999999999999999987643321
Q ss_pred cccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCC--cchhhcc----
Q 040845 684 MTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPI--STMEVVD---- 756 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---- 756 (824)
......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+....+. ...+....... ......+
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 156 -DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred -cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChHHhhhcccccc
Confidence 1223457889999998765 4578999999999999999999999975432211 11111100000 0000000
Q ss_pred ------ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 757 ------ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 757 ------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
+......... ......+..+.+++.+||..+|++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 234 FKGLSIPEPETREPLE-SKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccccCCCcccccCHH-HHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0000000000 0011346778999999999999999999999864
No 252
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.6e-35 Score=306.20 Aligned_cols=251 Identities=23% Similarity=0.338 Sum_probs=196.7
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-----cchhhhHHHHHHHHhcCCCCcceeEEeeeec--CCee
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-----GRAFKSFDVECAMMKSIRHRNLVKVISSCSN--EEFK 598 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 598 (824)
.+|+..+.||+|+||.||+|... +++.||+|++.... .+..+.+.+|+.++++++||||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46889999999999999999864 58999999886432 1234568889999999999999999998865 4677
Q ss_pred EEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 599 ALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
++++||+++++|.+++.... .+++..+..++.|++.|++||| +.+|+||||+|+||+++.++.++|+|||++....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 89999999999999997655 5788999999999999999999 9999999999999999999999999999987653
Q ss_pred CCCCc-cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 679 GEDQS-MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 679 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
..... .......++..|+|||.+.+..++.++||||+||++||+++|+.||...... ...... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~----~~~~~~-~~~~------- 225 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM----AAIFKI-ATQP------- 225 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH----HHHHHH-hcCC-------
Confidence 22111 1112345788999999998888999999999999999999999998753211 111000 0000
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....+..+...+.+++ +||..+|++||+++|++++
T Consensus 226 -------~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 226 -------TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred -------CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 00011123345567777 6888999999999999864
No 253
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.1e-35 Score=309.75 Aligned_cols=254 Identities=25% Similarity=0.434 Sum_probs=203.4
Q ss_pred ccCCCCceeeeccceEEEEEEEC------CCcEEEEEEeeccccc-hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR------DGMEVAVKVFNLQCGR-AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKA 599 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 599 (824)
++|+..+.||+|+||.||+|+.+ +...||+|.+...... ..+.+..|++++++++|+||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57888999999999999999864 2467999988654333 4567899999999999999999999999989999
Q ss_pred EEEeccCCCCHHHHhhhCC--------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeec
Q 040845 600 LVLEYMPHGSLEKYLHSSN--------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDF 671 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~--------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 671 (824)
+||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997544 15899999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCc
Q 040845 672 GIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPIS 750 (824)
Q Consensus 672 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 750 (824)
|++....... ........++..|+|||.+.+..++.++||||||+++|++++ |..||...... ........ ..
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~~~~~---~~ 235 (275)
T cd05046 162 SLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLNRLQA---GK 235 (275)
T ss_pred ccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHHHHHc---CC
Confidence 9987543222 122233456778999999988888999999999999999999 77787543221 11111110 00
Q ss_pred chhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 751 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
.....+..++..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 236 --------------~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 236 --------------LELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred --------------cCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 000011235667999999999999999999999999885
No 254
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.1e-35 Score=319.73 Aligned_cols=267 Identities=23% Similarity=0.286 Sum_probs=198.6
Q ss_pred HHHhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecC---
Q 040845 522 LFQATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNE--- 595 (824)
Q Consensus 522 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--- 595 (824)
.....++|++.+.||+|+||.||+|... +++.||||.+..... ...+.+.+|+.+++.++||||+++++++...
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 10 VWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred HhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 4456789999999999999999999754 588999999864321 2345577899999999999999999987533
Q ss_pred ---CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecc
Q 040845 596 ---EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 672 (824)
Q Consensus 596 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 672 (824)
...++++|++ +++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCc
Confidence 4568999998 77998887643 5889999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcc
Q 040845 673 IAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIST 751 (824)
Q Consensus 673 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 751 (824)
++...... .....+|..|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+...... ..
T Consensus 164 ~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~-~~ 236 (343)
T cd07878 164 LARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIMEVVGT-PS 236 (343)
T ss_pred cceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCC-CC
Confidence 99865322 223468999999999876 46899999999999999999999998652211 111111111000 00
Q ss_pred hhhccc-----------cccCchhhhh-hhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 752 MEVVDA-----------NLLSQEDIHF-VAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 752 ~~~~~~-----------~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.+.... .......... .......+.+.+++.+|+..||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 237 PEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 0000000000 0001234567899999999999999999999976
No 255
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.8e-36 Score=311.19 Aligned_cols=239 Identities=27% Similarity=0.376 Sum_probs=189.8
Q ss_pred ceeeeccceEEEEEEECC--------CcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 533 NLIGRGGFGSVYKARIRD--------GMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+.||+|+||.||+|..+. ...||+|.+........+.+.+|+.+++.++||||+++++++..+...++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 368999999999997642 234888887655445567788899999999999999999999998999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCc--------EEEeecccccc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV--------AHLSDFGIAKL 676 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~--------~kl~Dfg~a~~ 676 (824)
+++|+|.+++...+..+++..+..++.|++.|++||| +.+|+||||||+||+++.++. ++++|||.+..
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 9999999999876667899999999999999999999 999999999999999987765 69999998875
Q ss_pred cCCCCCccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCC-CCCcccccCcchhhhhhhhhCCCcchhh
Q 040845 677 LTGEDQSMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRK-KPTDELFNGEMTLKHWVNDCLPISTMEV 754 (824)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (824)
.... ....++..|+|||.+.+. .++.++||||||+++|||++|. .|+..... .. .......
T Consensus 158 ~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~-~~-~~~~~~~--------- 220 (258)
T cd05078 158 VLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS-QK-KLQFYED--------- 220 (258)
T ss_pred cCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH-HH-HHHHHHc---------
Confidence 4321 223477889999998764 5799999999999999999995 44433111 10 0000000
Q ss_pred ccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 755 VDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
. ...+.....++.+++.+||+.||++|||++++++.|
T Consensus 221 ---~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 221 ---R--------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred ---c--------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0 001112235688999999999999999999999886
No 256
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=6.1e-35 Score=308.77 Aligned_cols=271 Identities=22% Similarity=0.284 Sum_probs=200.4
Q ss_pred hhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++++|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+|+.+++.++|+||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578999999999999999999764 589999999865432 22346678999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+. +++.+++......+.+.++..++.|++.||+||| +.+|+|+||||+||+++.++.++|+|||+++.......
T Consensus 83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 158 (291)
T cd07870 83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ 158 (291)
T ss_pred eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC
Confidence 9995 6888777655556788889999999999999999 89999999999999999999999999999875432221
Q ss_pred ccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhh-CCCc----------
Q 040845 683 SMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDC-LPIS---------- 750 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~---------- 750 (824)
......++..|+|||.+.+. .++.++||||+||++|||++|+.||+........+...+... .+..
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 159 --TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred --CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 12234578899999988754 478899999999999999999999975432211111111000 0000
Q ss_pred -chhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 751 -TMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 751 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.......................+..+.+++.+|+..||++|||+.|++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 000000000000000000111224578899999999999999999998764
No 257
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=5.2e-35 Score=305.56 Aligned_cols=250 Identities=25% Similarity=0.366 Sum_probs=188.4
Q ss_pred eeeeccceEEEEEEECC---CcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCC
Q 040845 534 LIGRGGFGSVYKARIRD---GMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGS 609 (824)
Q Consensus 534 ~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 609 (824)
.||+|+||.||+|...+ ...+|+|.+..... .....+.+|+..++.++|+||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 35788887754332 234567889999999999999999999999999999999999999
Q ss_pred HHHHhhhCC----CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 610 LEKYLHSSN----YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 610 L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
|.+++.... ...++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+|||++...........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 999997654 23467788899999999999999 99999999999999999999999999999875433322222
Q ss_pred cccccccccccCccCcC-------CCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 686 QTQTLATIGYMAPEYGR-------EGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~-------~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
.....++..|+|||+.. ...++.++||||+||++|||++ |..||......+ .......... .....+
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~~----~~~~~~ 233 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVREQD----IKLPKP 233 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhccC----ccCCCC
Confidence 23344677899999864 2356889999999999999999 677776532211 1111111100 000011
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
. .+..++..+.+++..|| .||++|||++||++.|
T Consensus 234 ~----------~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 234 Q----------LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred c----------ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 0 11234566788999999 5999999999999886
No 258
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-37 Score=318.94 Aligned_cols=250 Identities=24% Similarity=0.341 Sum_probs=210.5
Q ss_pred CCCCceeeeccceEEEEEEECC-CcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 529 FSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
|++..-||.|+||.||+|..++ +--.|-|++.....+..+++.-|++||....||+||++++.|..+...+++.|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 4556789999999999998764 445678888877788899999999999999999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|..+..+-.-+..+++.++.-+++|++.||.||| +.+|||||+|+.|||++-+|.++++|||.+.... .......
T Consensus 114 GAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t~qkRD 188 (1187)
T KOG0579|consen 114 GAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK--STRQKRD 188 (1187)
T ss_pred chHhHHHHHhccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccch--hHHhhhc
Confidence 9999998887889999999999999999999999 9999999999999999999999999999886432 2223455
Q ss_pred cccccccccCccCcC-----CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 688 QTLATIGYMAPEYGR-----EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
..+||+.|||||+.+ ..+|++++||||||+.+.||..+.+|....-.. ..+..+ ...
T Consensus 189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM-RVllKi-----------------aKS 250 (1187)
T KOG0579|consen 189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKI-----------------AKS 250 (1187)
T ss_pred cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH-HHHHHH-----------------hhc
Confidence 678999999999753 668999999999999999999999986653221 111111 122
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.+..+.+|...+..+.+++.+|+..||..||+++++++|
T Consensus 251 ePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 251 EPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred CCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 223344556678889999999999999999999999876
No 259
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.4e-35 Score=318.86 Aligned_cols=255 Identities=20% Similarity=0.259 Sum_probs=199.2
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||+||+|+.+ +++.||+|++.... ......+.+|..++..++|++|+++++++.+++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47889999999999999999865 57899999986431 223455778999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 999999999999875557899999999999999999999 99999999999999999999999999999976543222
Q ss_pred ccccccccccccccCccCcCC-----CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 683 SMTQTQTLATIGYMAPEYGRE-----GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
.......||+.|+|||++.+ +.++.++||||+||++|||++|+.||......+ ........... .. ..
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-~~~~i~~~~~~---~~-~p- 230 (331)
T cd05624 158 -VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE-TYGKIMNHEER---FQ-FP- 230 (331)
T ss_pred -eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH-HHHHHHcCCCc---cc-CC-
Confidence 12223468999999998865 467899999999999999999999996522111 11111000000 00 00
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQ--RINAKEIVAK 801 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~ 801 (824)
.....++..+.+++.+|+..++.+ |+++++++++
T Consensus 231 ----------~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 231 ----------SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ----------CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 000124567889999999876654 5688888876
No 260
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=6.1e-35 Score=303.33 Aligned_cols=237 Identities=26% Similarity=0.441 Sum_probs=189.2
Q ss_pred ceeeeccceEEEEEEECCCc-----------EEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 533 NLIGRGGFGSVYKARIRDGM-----------EVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
+.||+|+||.||+|.+.+.. .|++|.+...... ...+.+|+.+++.++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46899999999999876432 5788877544332 6788899999999999999999999987 778999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-------cEEEeecccc
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-------VAHLSDFGIA 674 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-------~~kl~Dfg~a 674 (824)
|||+++|+|.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++ .+|++|||++
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 9999999999999876657899999999999999999999 99999999999999999887 7999999999
Q ss_pred cccCCCCCccccccccccccccCccCcCCC--CCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcc
Q 040845 675 KLLTGEDQSMTQTQTLATIGYMAPEYGREG--QVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPIST 751 (824)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 751 (824)
..... .....++..|+|||++... .++.++||||||+++||+++ |..||...... ....+....
T Consensus 156 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~~~~----- 222 (259)
T cd05037 156 ITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFYQDQ----- 222 (259)
T ss_pred ccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHHhcC-----
Confidence 86532 1223466789999998776 78999999999999999999 46666553211 111111100
Q ss_pred hhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 752 MEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
..... .....+.+++.+||..+|++|||+.|+++.|
T Consensus 223 ------~~~~~---------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 223 ------HRLPM---------PDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred ------CCCCC---------CCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 00000 0015688999999999999999999999876
No 261
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5.2e-35 Score=308.66 Aligned_cols=267 Identities=24% Similarity=0.309 Sum_probs=204.0
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|++.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 5788899999999999999865 58999999987553 23356788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+ +++|.+++......+++.++..++.|+++|++||| +.+++|+||||+||+++.++.++++|||.+........ .
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~ 155 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-R 155 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-C
Confidence 9 99999999876667999999999999999999999 99999999999999999999999999999987643322 1
Q ss_pred ccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcch-------hh--
Q 040845 685 TQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTM-------EV-- 754 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------~~-- 754 (824)
......++..|+|||.+.+. .++.++||||+|+++|||++|.+||...... ... .+.......... +.
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQL-AIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHH-HHHHHHcCCCChHHHhhccCcch
Confidence 22344688999999988654 4689999999999999999998777542211 111 111111100000 00
Q ss_pred ccccccC-chhhhh-hhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 755 VDANLLS-QEDIHF-VAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 755 ~~~~~~~-~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....... ...... ....+.+..+.+++.+|+..+|++|||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000 000000 0112345789999999999999999999999875
No 262
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.3e-35 Score=305.40 Aligned_cols=246 Identities=29% Similarity=0.492 Sum_probs=198.8
Q ss_pred ccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccC
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMP 606 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 606 (824)
.+|++.+.||+|+||.||+|.. +++.||+|.++.. ...+.+.+|+.++++++|||++++++++..+ ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 5688899999999999999975 4888999998643 2346788999999999999999999998765 4689999999
Q ss_pred CCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 607 HGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 607 ~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
+++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||.+......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----- 153 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----- 153 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceecccc-----
Confidence 999999997544 45789999999999999999999 999999999999999999999999999998754321
Q ss_pred cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchh
Q 040845 686 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
......+..|+|||.+.++.++.++|+||+|+++|||++ |+.||......+ ....+....
T Consensus 154 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~----------------- 214 (254)
T cd05083 154 VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE--VKECVEKGY----------------- 214 (254)
T ss_pred CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHHhCCC-----------------
Confidence 112234568999999988889999999999999999998 888886532111 111111000
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
....+..++..+.+++.+||+.+|++||+++++++.|++
T Consensus 215 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 215 -RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 001112346778999999999999999999999998864
No 263
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.7e-35 Score=310.72 Aligned_cols=247 Identities=25% Similarity=0.367 Sum_probs=200.6
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.|+..+.||+|+||.||+|.+. +++.||+|.+.... ....+.+..|++++++++||||+++++++......++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3556678999999999999864 57899999986443 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
++++|.+++... .+++..+..++.|+++|++||| +.+++|+||+|+||++++++.++++|||++..+.... ..
T Consensus 85 ~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--~~ 157 (277)
T cd06642 85 GGGSALDLLKPG--PLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IK 157 (277)
T ss_pred CCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcc--hh
Confidence 999999998653 5789999999999999999999 9999999999999999999999999999997654322 12
Q ss_pred cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 686 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
.....++..|+|||.+.+..++.++|||||||++|||++|+.||........ ..+..... .+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~--------~~-------- 219 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--LFLIPKNS--------PP-------- 219 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--HhhhhcCC--------CC--------
Confidence 2234578899999999988899999999999999999999999865322111 11100000 00
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
..+..++..+.+++.+||..+|++||++.|++++
T Consensus 220 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 220 --TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred --CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0112345678999999999999999999999985
No 264
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.6e-35 Score=304.84 Aligned_cols=248 Identities=27% Similarity=0.363 Sum_probs=201.6
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-----cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-----GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
+|+..+.||+|++|.||+|... +++.||+|.+.... .+..+.+..|+++++.++|+||+++++++.++...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777899999999999999876 68999999986543 22456788899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
+||+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||.+.......
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 99999999999997664 6889999999999999999999 9999999999999999999999999999987653322
Q ss_pred CccccccccccccccCccCcCCCC-CCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 682 QSMTQTQTLATIGYMAPEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
......++..|+|||.+.... ++.++|+||||+++|++++|+.||........ ...+... ..
T Consensus 157 ---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~-~~------------ 219 (258)
T cd06632 157 ---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA-VFKIGRS-KE------------ 219 (258)
T ss_pred ---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH-HHHHHhc-cc------------
Confidence 123345788999999887766 89999999999999999999999876331110 0000000 00
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 761 SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+..++..+.+++.+||..+|++||++.+++++
T Consensus 220 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 220 -----LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred -----CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 000112345678899999999999999999999864
No 265
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.8e-36 Score=289.33 Aligned_cols=273 Identities=21% Similarity=0.277 Sum_probs=202.4
Q ss_pred hccCCCCceeeeccceEEEEEEECC-----CcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeec-CCe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD-----GMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSN-EEF 597 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 597 (824)
...|+..+.||+|.||.||+|.-++ ...+|+|.++.+. +......-+|+.+++.++|||++.+..++-. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 4679999999999999999995332 2379999987553 2345667889999999999999999999876 889
Q ss_pred eEEEEeccCCCCHHHHhhhCC----CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC----CcEEEe
Q 040845 598 KALVLEYMPHGSLEKYLHSSN----YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN----MVAHLS 669 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~----~~~kl~ 669 (824)
.++++||.+. +|.+.++-++ ..++...+..+++||+.|+.||| +.=|+|||+||.||++..+ |.|||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEee
Confidence 9999999988 8988886543 56888999999999999999999 6779999999999999876 999999
Q ss_pred ecccccccCCCCCc-cccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCc-----c---hh
Q 040845 670 DFGIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGE-----M---TL 739 (824)
Q Consensus 670 Dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~-----~---~~ 739 (824)
|||+|+.+.+.-.. .....++.|.||+|||.+.+. .||.+.||||.|||+.||+|-.+-|......- . .+
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 99999998755333 355677899999999988776 58999999999999999999998775432110 0 01
Q ss_pred hhhhhhhCCCcchhhccccccCch-------------hhhhhh----HHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 740 KHWVNDCLPISTMEVVDANLLSQE-------------DIHFVA----KEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~----~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
..+.....-....+..+.+...+. ...+.. ...-++..++|+.+++++||.+|.|+.+++++-
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 111110000000011111101000 000000 001233478999999999999999999998864
No 266
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.9e-35 Score=304.54 Aligned_cols=250 Identities=32% Similarity=0.576 Sum_probs=201.7
Q ss_pred CCCCceeeeccceEEEEEEECC-----CcEEEEEEeeccccc-hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 529 FSENNLIGRGGFGSVYKARIRD-----GMEVAVKVFNLQCGR-AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
+++.+.||+|+||.||+|++.+ +..||+|++...... ..+.+..|+.+++.++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567899999999999998764 388999998655433 5678889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCC-CCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYS-LDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
||+++++|.+++...... +++.++..++.|++.|++||| +.+++|+||+|+||++++++.++++|||.+.......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 999999999999765533 899999999999999999999 9999999999999999999999999999998765432
Q ss_pred CccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 682 QSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
.... ....++..|+|||.+.+..++.++||||+|+++|||++ |..||..... ......+....
T Consensus 158 ~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~~------------- 221 (258)
T smart00219 158 YYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--EEVLEYLKKGY------------- 221 (258)
T ss_pred cccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCC-------------
Confidence 2221 12336789999999988889999999999999999998 7777765211 11111111000
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 761 SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
....+..++..+.+++.+||..||++|||+.|+++.|
T Consensus 222 -----~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 -----RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0011122566799999999999999999999998764
No 267
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.9e-35 Score=309.79 Aligned_cols=259 Identities=23% Similarity=0.329 Sum_probs=202.7
Q ss_pred cHHHHHHhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcC-CCCcceeEEeeeec-
Q 040845 518 SYLELFQATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-RHRNLVKVISSCSN- 594 (824)
Q Consensus 518 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~- 594 (824)
+..++....+.|++.+.||+|+||.||+|... +++.||+|++.... .....+..|+.+++++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 44555566788999999999999999999864 58899999986542 3345678899999998 69999999999843
Q ss_pred -----CCeeEEEEeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 040845 595 -----EEFKALVLEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 668 (824)
Q Consensus 595 -----~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 668 (824)
....+++|||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++|+|++|+||++++++.++|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEE
Confidence 467899999999999999987643 45788889999999999999999 999999999999999999999999
Q ss_pred eecccccccCCCCCccccccccccccccCccCcC-----CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhh
Q 040845 669 SDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-----EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWV 743 (824)
Q Consensus 669 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~ 743 (824)
+|||++........ ......++..|+|||.+. ...++.++||||+||++|||++|+.||.......... . +
T Consensus 163 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~-~-~ 238 (282)
T cd06636 163 VDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF-L-I 238 (282)
T ss_pred eeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh-h-H
Confidence 99999875532211 123345888999999875 3467889999999999999999999986532111100 0 0
Q ss_pred hhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 744 NDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
... .........++..+.+++.+||..||++|||+.|++++
T Consensus 239 ------------~~~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 239 ------------PRN-----PPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred ------------hhC-----CCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 000 00000112356679999999999999999999999764
No 268
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=7.6e-35 Score=304.07 Aligned_cols=257 Identities=26% Similarity=0.344 Sum_probs=206.4
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
++|++.+.||.|+||+||+|... ++..||+|++.... ......+.+|+++++.++|+|++++++.+..+...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46889999999999999999865 58899999986442 23557788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 605 MPHGSLEKYLHSSN--YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 605 ~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 99999999997642 36889999999999999999999 99999999999999999999999999999987654433
Q ss_pred cc--ccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 683 SM--TQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 683 ~~--~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
.. ......++..|+|||.+... .++.++|+|||||++|||++|+.||......+ ....+.....+ .
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~---------~- 226 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQNDPP---------S- 226 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcCCCC---------C-
Confidence 21 22334588899999988776 78999999999999999999999997642221 11111111000 0
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
... ......++..+.+++.+||..||++||++.|++++
T Consensus 227 ~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 227 LET----GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred cCC----ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000 00012456778999999999999999999999875
No 269
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2.8e-38 Score=329.00 Aligned_cols=376 Identities=26% Similarity=0.380 Sum_probs=321.7
Q ss_pred Ccccccccc-cCCcccccCCCCCcEEEccCCcccccccccccCCCCCCEEeCCCCcCCcccChhhhCcCCCceeeccCCc
Q 040845 2 PSIINNFLT-STTPKEIDNISNLKVLYLYNNRLQGEIIHEIGHLHNLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTNNS 80 (824)
Q Consensus 2 ~~l~~n~i~-~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 80 (824)
++++.|.++ ...|.....++.+++|-|...++. .+|..++.+.+|++|.+++|++. .+-+.+..++.|+.+.+..|+
T Consensus 12 vDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~ 89 (1255)
T KOG0444|consen 12 VDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNN 89 (1255)
T ss_pred ccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccc
Confidence 467889998 589999999999999999999999 89999999999999999999998 667889999999999999998
Q ss_pred cc--cccCccccCCCCCccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCCc
Q 040845 81 LS--GCLSSITDVGLPNLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSST 158 (824)
Q Consensus 81 l~--~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 158 (824)
++ |+|..++. +..|..||||+|+++ ..|..+..-+++-.|+|++|+|..+....|.+|+.|-.||||+|++..+|
T Consensus 90 LKnsGiP~diF~--l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LP 166 (1255)
T KOG0444|consen 90 LKNSGIPTDIFR--LKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLP 166 (1255)
T ss_pred cccCCCCchhcc--cccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcC
Confidence 86 67777764 999999999999999 77899999999999999999999777777889999999999999999987
Q ss_pred CcccccccCCCCCCCcEEECcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEecCCccC-Ccc
Q 040845 159 LDLSFLSSLSNCKSLTHISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNKLN-GSI 237 (824)
Q Consensus 159 ~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~-~~~ 237 (824)
+. ...+.+|++|+|++|++.-. .| ..+-.+++|++|.+++.+-+ ..+
T Consensus 167 PQ------~RRL~~LqtL~Ls~NPL~hf-----------QL---------------rQLPsmtsL~vLhms~TqRTl~N~ 214 (1255)
T KOG0444|consen 167 PQ------IRRLSMLQTLKLSNNPLNHF-----------QL---------------RQLPSMTSLSVLHMSNTQRTLDNI 214 (1255)
T ss_pred HH------HHHHhhhhhhhcCCChhhHH-----------HH---------------hcCccchhhhhhhcccccchhhcC
Confidence 54 67788999999999997522 01 12234677777788775433 346
Q ss_pred chhhcCCCCCCEEEcccccCcccCCccccccCCccEEEccCccccccCCccccCCCCCcEEEcCCCCCCCCCCccccccc
Q 040845 238 PITLGKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKVLSLGSNELTSIPLNFWSLKD 317 (824)
Q Consensus 238 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~ 317 (824)
|.++..+.+|..+|||.|.+. .+|+.+..+++|+.|+|++|+|+ ...-..+.+.+|++|+||.|+++.+|..++.++.
T Consensus 215 Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~k 292 (1255)
T KOG0444|consen 215 PTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTK 292 (1255)
T ss_pred CCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhccchHHHhhhHH
Confidence 778888888888888888888 78888888888999999999988 4555677788999999999999999999999999
Q ss_pred ccccccccccccC-cCCccccccccchhhhcccccccccCCCccCCCCCCCeEEccCccccccCCccccccccccEEEcc
Q 040845 318 ILDLNLSSNCFSG-PLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEGSIPDSFGDLISLKSLNLS 396 (824)
Q Consensus 318 L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 396 (824)
|+.|++.+|+++- -+|..++++.+|+.+..++|.+. ..|..++.|..|+.|.|++|++- .+|+++.-++.|+.|||.
T Consensus 293 L~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlr 370 (1255)
T KOG0444|consen 293 LTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLR 370 (1255)
T ss_pred HHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeecc
Confidence 9999999999863 48999999999999999999998 78999999999999999999998 799999999999999999
Q ss_pred CcccCCCCcccccCCcccceee
Q 040845 397 YNNLSGTIPVSLEKLSYLKDLN 418 (824)
Q Consensus 397 ~N~l~~~~p~~~~~l~~L~~L~ 418 (824)
+|+-.-..|+--..-++|+.-+
T Consensus 371 eNpnLVMPPKP~da~~~lefYN 392 (1255)
T KOG0444|consen 371 ENPNLVMPPKPNDARKKLEFYN 392 (1255)
T ss_pred CCcCccCCCCcchhhhcceeee
Confidence 9986623333322223444433
No 270
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=9.6e-35 Score=303.18 Aligned_cols=251 Identities=23% Similarity=0.391 Sum_probs=186.6
Q ss_pred eeeeccceEEEEEEECCC---cEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCC
Q 040845 534 LIGRGGFGSVYKARIRDG---MEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGS 609 (824)
Q Consensus 534 ~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 609 (824)
.||+|+||.||+|...++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++.+.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999975443 345667665432 2345678899999999999999999999999999999999999999
Q ss_pred HHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 040845 610 LEKYLHSSN---YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQ 686 (824)
Q Consensus 610 L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 686 (824)
|.+++.... ...++..+..++.|+++|++||| +.+++||||||+||+++.++.++|+|||++............
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 999997643 34566778899999999999999 999999999999999999999999999998643222221222
Q ss_pred ccccccccccCccCcCC-------CCCCccchHHHHHHHHHHHHhC-CCCCcccccCcchhhhhhhhhCCCcchhhcccc
Q 040845 687 TQTLATIGYMAPEYGRE-------GQVSTNGDVYSFGIMLMETFTR-KKPTDELFNGEMTLKHWVNDCLPISTMEVVDAN 758 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslG~~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (824)
....++..|+|||++.. ..++.++|||||||++|||+++ ..||...... ......... ......++.
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~----~~~~~~~~~ 233 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR-EVLNHVIKD----QQVKLFKPQ 233 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhh----cccccCCCc
Confidence 34457889999998743 2457899999999999999975 5576542211 111111111 001111111
Q ss_pred ccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 759 LLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
. +..+...+.+++..|| .+|++||+++|+++.|.
T Consensus 234 ~----------~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 234 L----------ELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred c----------CCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1 1123456788999999 67999999999998773
No 271
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.1e-35 Score=305.76 Aligned_cols=254 Identities=24% Similarity=0.315 Sum_probs=205.0
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
++|+..+.||+|+||.||+|..+ +++.||+|.+..... ...+.+.+|++++++++||||+++++++..+...++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35778889999999999999876 589999999876532 3456788899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
+++++|.+++......++...+..++.|++.|++||| + .+++|+||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 156 (265)
T cd06605 81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA- 156 (265)
T ss_pred cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence 9999999999876557889999999999999999999 8 9999999999999999999999999999876532211
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
....++..|+|||...+..++.++||||+|+++|++++|+.||.....................
T Consensus 157 ---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------- 220 (265)
T cd06605 157 ---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP------------- 220 (265)
T ss_pred ---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-------------
Confidence 1155788999999998889999999999999999999999998764322111111111111000
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.... ....++..+.+++.+||..||++|||+.|++++
T Consensus 221 ~~~~-~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 221 PPRL-PSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCCC-ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 0000 011156678999999999999999999999865
No 272
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=7.6e-35 Score=302.01 Aligned_cols=250 Identities=23% Similarity=0.320 Sum_probs=203.8
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|+..+.||+|+||.||.++.. +++.||+|.+.... ......+.+|++++++++|+||+++++++.+....+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4788899999999999999754 58899999886542 33456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSS-NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
+++++|.+++... ...+++.++..++.|++.|++||| +.+++|+||+|+||++++++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 9999999999765 356899999999999999999999 89999999999999999999999999999986643321
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
......++..|+|||...+..++.++||||+|+++|||++|+.||...... ......... .. .
T Consensus 157 -~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-----~~~~~~~~~--------~~-~-- 219 (256)
T cd08221 157 -MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-----NLVVKIVQG--------NY-T-- 219 (256)
T ss_pred -cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHcC--------CC-C--
Confidence 223345889999999998888899999999999999999999998652211 111110000 00 0
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
..+..++..+.+++.+||..+|++||++.|++++.
T Consensus 220 ----~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 220 ----PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ----CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 00123456788999999999999999999998763
No 273
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=6.7e-35 Score=304.02 Aligned_cols=251 Identities=23% Similarity=0.312 Sum_probs=197.7
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-----cchhhhHHHHHHHHhcCCCCcceeEEeeeecC--Cee
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-----GRAFKSFDVECAMMKSIRHRNLVKVISSCSNE--EFK 598 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 598 (824)
.+|++.+.||+|+||.||.|... +++.||||.+.... ....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 57889999999999999999865 48999999875432 12345778899999999999999999998663 567
Q ss_pred EEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 599 ALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
++||||+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||.+....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 89999999999999987654 5788889999999999999999 9999999999999999999999999999988654
Q ss_pred CCCCc-cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 679 GEDQS-MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 679 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
..... .......++..|+|||.+.+..++.++|||||||++|||++|+.||...... .........
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~--------- 224 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIATQ--------- 224 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HHHHHHhcC---------
Confidence 22111 1122345788999999998888999999999999999999999998653111 111000000
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
......+...+..+.+++.+|+. +|++||+++|++++
T Consensus 225 ------~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 225 ------PTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred ------CCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 00011123345668889999995 99999999999864
No 274
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.3e-35 Score=309.97 Aligned_cols=260 Identities=25% Similarity=0.313 Sum_probs=202.7
Q ss_pred cHHHHHHhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcC-CCCcceeEEeeeecC
Q 040845 518 SYLELFQATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-RHRNLVKVISSCSNE 595 (824)
Q Consensus 518 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 595 (824)
...++..+.++|++.+.||+|+||.||+|... +++.||+|++... ....+.+.+|+.+++++ +|||++++++++...
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI-SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc-ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 34455566889999999999999999999864 5889999998643 23345677899999999 899999999998653
Q ss_pred -----CeeEEEEeccCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEE
Q 040845 596 -----EFKALVLEYMPHGSLEKYLHS---SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAH 667 (824)
Q Consensus 596 -----~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 667 (824)
...++||||+++++|.++++. ....+++..++.++.|++.|++||| +.+++||||||+||++++++.+|
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEE
Confidence 358999999999999998863 2346889999999999999999999 99999999999999999999999
Q ss_pred EeecccccccCCCCCccccccccccccccCccCcCCC-----CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhh
Q 040845 668 LSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-----QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHW 742 (824)
Q Consensus 668 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~ 742 (824)
|+|||.+........ ......++..|+|||.+... .++.++|||||||++|||++|+.||......+ ....+
T Consensus 169 l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~-~~~~~ 245 (291)
T cd06639 169 LVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK-TLFKI 245 (291)
T ss_pred Eeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH-HHHHH
Confidence 999999886543221 12234578899999987543 36889999999999999999999986532211 11111
Q ss_pred hhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 743 VNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
..... .....++.....+.+++.+||+.+|++||++.|++++
T Consensus 246 ~~~~~-----------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 246 PRNPP-----------------PTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred hcCCC-----------------CCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 11000 0001112334568999999999999999999999875
No 275
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-35 Score=341.60 Aligned_cols=255 Identities=20% Similarity=0.306 Sum_probs=197.1
Q ss_pred HhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeec--CCee
Q 040845 524 QATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSN--EEFK 598 (824)
Q Consensus 524 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 598 (824)
...++|.+.+.||+|+||+||+|+.. ++..||+|.+.... ......+..|+.+++.++||||++++++|.+ ....
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34578999999999999999999865 47789999886542 2345678889999999999999999998854 4578
Q ss_pred EEEEeccCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHhhcCC----CCCeEecCCCCCCeeeCC---------
Q 040845 599 ALVLEYMPHGSLEKYLHSS---NYSLDIFQRLNIMIDVASALEYLHFGY----SAPVIHCDLKPSNVLLDD--------- 662 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~----~~~ivH~Dlk~~Nill~~--------- 662 (824)
++||||+++|+|.+++... ...+++..++.|+.||+.||+|||... ..+||||||||+|||++.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 9999999999999998753 246899999999999999999999311 145999999999999964
Q ss_pred --------CCcEEEeecccccccCCCCCccccccccccccccCccCcCC--CCCCccchHHHHHHHHHHHHhCCCCCccc
Q 040845 663 --------NMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE--GQVSTNGDVYSFGIMLMETFTRKKPTDEL 732 (824)
Q Consensus 663 --------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~tg~~p~~~~ 732 (824)
.+.+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 3358999999998653222 1233468999999998854 45889999999999999999999998642
Q ss_pred ccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 733 FNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.. ...++....... . . ....++..+.+||..||..+|++||++.|++.+
T Consensus 247 ~~----~~qli~~lk~~p-------~-l--------pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 247 NN----FSQLISELKRGP-------D-L--------PIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred Cc----HHHHHHHHhcCC-------C-C--------CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 11 111111110000 0 0 001235668999999999999999999999864
No 276
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.3e-35 Score=310.10 Aligned_cols=252 Identities=23% Similarity=0.365 Sum_probs=200.2
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
++|++.+.||+|+||.||+|.++ ++..||+|.+.... ......+.+|++++++++|+||+++++++..+...++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 46888999999999999999876 68999999886542 23346788899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 605 MPHGSLEKYLHSSN--YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 605 ~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
+++++|.+++.... ..+++..+..++.|++.|+.|||+ +.+|+|+||||+||+++.++.++|+|||.+..+....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 157 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL- 157 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-
Confidence 99999999987642 368999999999999999999992 2599999999999999999999999999987653221
Q ss_pred ccccccccccccccCccCcCCC------CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcc
Q 040845 683 SMTQTQTLATIGYMAPEYGREG------QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVD 756 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (824)
.....++..|+|||.+.+. .++.++|+||+||++|||++|+.||....... .... ... ..+
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~-~~~--------~~~ 224 (286)
T cd06622 158 ---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-IFAQ-LSA--------IVD 224 (286)
T ss_pred ---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-HHHH-HHH--------Hhh
Confidence 1223478899999987544 35889999999999999999999986521111 0000 000 000
Q ss_pred ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 757 ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.. ....+..++..+.+++.+||..+|++||++++++++
T Consensus 225 ~~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 225 GD-------PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred cC-------CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 00 001122356778999999999999999999999985
No 277
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3e-35 Score=310.44 Aligned_cols=268 Identities=26% Similarity=0.360 Sum_probs=202.0
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
++|++.+.||+|+||.||+|.++ +++.||+|++..... ...+.+.+|+++++.++||||+++++++..+...++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999876 489999998754322 234567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|++++++.++..... .+++.++..++.|++.|++||| +.+++|+|++|+||++++++.++++|||++........
T Consensus 81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 155 (286)
T cd07846 81 FVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE- 155 (286)
T ss_pred cCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc-
Confidence 999988888776543 5899999999999999999999 89999999999999999999999999999986543321
Q ss_pred cccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhh--hCCCcchhhcc----
Q 040845 684 MTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVND--CLPISTMEVVD---- 756 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---- 756 (824)
......++..|+|||+..+ ..++.++||||||+++|||++|++||......+ ........ ..........+
T Consensus 156 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07846 156 -VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID-QLYHIIKCLGNLIPRHQEIFQKNPL 233 (286)
T ss_pred -ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHHHhCCCchhhHHHhccchH
Confidence 2233457889999998865 457889999999999999999999886422111 00000000 00000000000
Q ss_pred --cccc---CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 757 --ANLL---SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 757 --~~~~---~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.... ............++..+.+++.+||..+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 0000 00000111122457789999999999999999999999864
No 278
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.8e-35 Score=305.31 Aligned_cols=255 Identities=25% Similarity=0.390 Sum_probs=199.8
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc----------chhhhHHHHHHHHhcCCCCcceeEEeeeecCC
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG----------RAFKSFDVECAMMKSIRHRNLVKVISSCSNEE 596 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 596 (824)
+|...+.||+|+||.||+|... +|+.||+|.++.... ...+.+..|+.+++.++|+|++++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4778899999999999999754 589999998764211 12346778999999999999999999999999
Q ss_pred eeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 040845 597 FKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 676 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 676 (824)
..++||||+++++|.+++.... .+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++++|||.+..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 9999999999999999998764 6889999999999999999999 89999999999999999999999999999976
Q ss_pred cCCCCCccccccccccccccCccCcCCCC--CCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhh
Q 040845 677 LTGEDQSMTQTQTLATIGYMAPEYGREGQ--VSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEV 754 (824)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (824)
..............++..|+|||.+.... ++.++|+||+|+++||+++|..||..... ...+...... .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~-~~~~~ 232 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA----IAAMFKLGNK-RSAPP 232 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch----HHHHHHhhcc-ccCCc
Confidence 53222222223345788999999887654 78999999999999999999999854211 1111110000 00000
Q ss_pred ccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 755 VDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
+.. .....++..+.+++.+||..+|++|||+.|++++
T Consensus 233 ~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 233 IPP----------DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CCc----------cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 000 0111346678999999999999999999999875
No 279
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=9.1e-35 Score=307.54 Aligned_cols=270 Identities=23% Similarity=0.332 Sum_probs=200.0
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
.++|++.+.||+|++|.||+|..+ +++.||||.+..... .....+.+|+++++.++|+||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 367899999999999999999865 589999999865432 223456789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|+++ +|.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 84 ~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~- 158 (291)
T cd07844 84 YLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK- 158 (291)
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc-
Confidence 9974 999998876667899999999999999999999 99999999999999999999999999999875422111
Q ss_pred cccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCC-c-c-hhhcc---
Q 040845 684 MTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPI-S-T-MEVVD--- 756 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~-~-~~~~~--- 756 (824)
......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.................... . . .....
T Consensus 159 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 159 -TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred -cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 1222346788999998865 4578999999999999999999999965432111111111100000 0 0 00000
Q ss_pred ---c--cccCchhh-hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 757 ---A--NLLSQEDI-HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 757 ---~--~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
. ........ ...........+.+++.+|++.+|++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0 00000000 000000112567899999999999999999998764
No 280
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.8e-35 Score=303.49 Aligned_cols=249 Identities=23% Similarity=0.336 Sum_probs=202.6
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|++.+.||+|+||.||.++.. +|+.||+|.+.... ....+++.+|+.++++++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 5788999999999999999754 58999999986542 23445788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
+++++|.+++.... ..+++.++..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||.+........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~- 156 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE- 156 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-
Confidence 99999999987643 35789999999999999999999 89999999999999999999999999999986543221
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
......++..|+|||+..+..++.++|+|||||++|++++|+.||..... ...+.......
T Consensus 157 -~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~~~------------- 217 (256)
T cd08218 157 -LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM-----KNLVLKIIRGS------------- 217 (256)
T ss_pred -hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH-----HHHHHHHhcCC-------------
Confidence 12234578899999999888899999999999999999999999864211 11111100000
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+..++..+.+++.+||+.+|++||++.|++++
T Consensus 218 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 218 --YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred --CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 000122346678999999999999999999999875
No 281
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.8e-35 Score=310.17 Aligned_cols=257 Identities=22% Similarity=0.301 Sum_probs=205.3
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
++|++.+.||+|+||+||+|.+. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 56788899999999999999865 58899999886543 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+++++|.+++...+ .+++..+..++.+++.|+.|||+ ..+++||||+|+||++++++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--- 158 (284)
T cd06620 85 MDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--- 158 (284)
T ss_pred CCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc---
Confidence 99999999987654 68899999999999999999992 2689999999999999999999999999986542211
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcc------hhhhhhhhhCCCcchhhcccc
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEM------TLKHWVNDCLPISTMEVVDAN 758 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 758 (824)
.....++..|+|||.+.++.++.++|||||||++||+++|+.||......+. ....+........
T Consensus 159 -~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 229 (284)
T cd06620 159 -ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-------- 229 (284)
T ss_pred -cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc--------
Confidence 1234688999999999888899999999999999999999999976432211 0111111111000
Q ss_pred ccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 759 LLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
... .....++..+.+++.+||+.||++|||+.|++++..-
T Consensus 230 -----~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~ 269 (284)
T cd06620 230 -----PPR-LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF 269 (284)
T ss_pred -----CCC-CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 000 0111256678999999999999999999999987543
No 282
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=9.6e-35 Score=301.46 Aligned_cols=249 Identities=24% Similarity=0.360 Sum_probs=200.0
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeec-CCeeEEEEe
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSN-EEFKALVLE 603 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 603 (824)
.|++.+.||+|++|.||+|..+ +++.||+|.+.... ....+.+.+|++++++++|+|++++++.+.. +...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788999999999999999865 47899999986542 2345668889999999999999999998764 446789999
Q ss_pred ccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 604 YMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
|+++++|.+++.... ..+++.++..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 999999999997643 45899999999999999999999 99999999999999999999999999999986632221
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
......+++.|+|||+..+..++.++||||+|+++||+++|+.||..... ..+........ ..
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~~---------~~- 220 (257)
T cd08223 158 --MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVYRIIEGK---------LP- 220 (257)
T ss_pred --ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHhcC---------CC-
Confidence 22234578899999999998999999999999999999999999864221 11111110000 00
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
..+...+..+.+++.+||+.+|++|||+.+++++
T Consensus 221 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 221 -----PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred -----CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0112345678999999999999999999999875
No 283
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-35 Score=335.06 Aligned_cols=260 Identities=28% Similarity=0.456 Sum_probs=215.3
Q ss_pred hccCCCCceeeeccceEEEEEEEC----C----CcEEEEEEeecccc-chhhhHHHHHHHHhcC-CCCcceeEEeeeecC
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR----D----GMEVAVKVFNLQCG-RAFKSFDVECAMMKSI-RHRNLVKVISSCSNE 595 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~----~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 595 (824)
.++..+.+.+|+|+||.|++|... . ...||||.++.... ...+.+..|+++|+.+ +|+||+.++|+|...
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 344566679999999999999743 1 45799999875533 4567899999999999 599999999999999
Q ss_pred CeeEEEEeccCCCCHHHHhhhCC---------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee
Q 040845 596 EFKALVLEYMPHGSLEKYLHSSN---------------YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 660 (824)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 660 (824)
...++|+||++.|+|.++++..+ ..++..+.+.++.|||.|++||+ +.++||||+.++|||+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVLI 451 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEEe
Confidence 99999999999999999998776 34888999999999999999999 9999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCcccc-ccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcch
Q 040845 661 DDNMVAHLSDFGIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMT 738 (824)
Q Consensus 661 ~~~~~~kl~Dfg~a~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~ 738 (824)
.++..+||+|||+|+.....+..... +...-+..|||||.+....|+.++|||||||++||++| |..||.+.... ..
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~-~~ 530 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT-EE 530 (609)
T ss_pred cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH-HH
Confidence 99999999999999976554444322 22125677999999999999999999999999999999 77787652211 11
Q ss_pred hhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 040845 739 LKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRD 807 (824)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 807 (824)
+..++ ..+.+...|..|+.+++++|+.||+.+|++||++.|+++.+.....
T Consensus 531 l~~~l------------------~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 531 LLEFL------------------KEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred HHHHH------------------hcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 11121 2344566778899999999999999999999999999999999543
No 284
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=8.5e-35 Score=304.02 Aligned_cols=251 Identities=23% Similarity=0.372 Sum_probs=199.3
Q ss_pred cCCCCceeeeccceEEEEEEECC--CcEEEEEEeeccc----------cchhhhHHHHHHHHhc-CCCCcceeEEeeeec
Q 040845 528 KFSENNLIGRGGFGSVYKARIRD--GMEVAVKVFNLQC----------GRAFKSFDVECAMMKS-IRHRNLVKVISSCSN 594 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 594 (824)
.|++.+.||+|+||.||+|.++. ++.+|+|.+.... .....++..|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999998764 6889999875331 1223456678887765 799999999999999
Q ss_pred CCeeEEEEeccCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEecCCCCCCeeeCCCCcEEEee
Q 040845 595 EEFKALVLEYMPHGSLEKYLHS---SNYSLDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSD 670 (824)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlk~~Nill~~~~~~kl~D 670 (824)
++..++||||+++++|.+++.. ....+++..++.++.|++.|++||| + .+++|+||+|+||+++.++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLH---KEKRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhc---cCCceeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999998753 3356889999999999999999999 5 6899999999999999999999999
Q ss_pred cccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCc
Q 040845 671 FGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIS 750 (824)
Q Consensus 671 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 750 (824)
||.+....... ......++..|+|||...++.++.++||||||+++|||++|+.||....... ........
T Consensus 158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~-~~~~~~~~----- 228 (269)
T cd08528 158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS-LATKIVEA----- 228 (269)
T ss_pred ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH-HHHHHhhc-----
Confidence 99998654332 2234568889999999998889999999999999999999999986521110 00110000
Q ss_pred chhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 751 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
.... .....++..+.+++.+||+.||++||++.|+.++++
T Consensus 229 -------~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 229 -------VYEP------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -------cCCc------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 0000 001123567899999999999999999999999875
No 285
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=5.3e-35 Score=306.29 Aligned_cols=254 Identities=28% Similarity=0.470 Sum_probs=198.8
Q ss_pred CCCCceeeeccceEEEEEEEC----CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCC------
Q 040845 529 FSENNLIGRGGFGSVYKARIR----DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEE------ 596 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 596 (824)
|.+.+.||+|+||.||+|.+. ++..||||++.... ....+.+.+|+++++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999753 36889999986542 234567888999999999999999999875432
Q ss_pred eeEEEEeccCCCCHHHHhhhCC-----CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeec
Q 040845 597 FKALVLEYMPHGSLEKYLHSSN-----YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDF 671 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 671 (824)
..++++||+.+|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 3478999999999998875322 35788999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCCCc
Q 040845 672 GIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLPIS 750 (824)
Q Consensus 672 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 750 (824)
|.++...............++..|++||......++.++|||||||++|||++ |+.||..... .....++.....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~-- 233 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLIKGNR-- 233 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHHcCCc--
Confidence 99986643332222223345678999999988889999999999999999999 7888765322 111111111000
Q ss_pred chhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 040845 751 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI 805 (824)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 805 (824)
...+..++..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 234 ----------------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 234 ----------------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000123456789999999999999999999999999875
No 286
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.8e-34 Score=309.40 Aligned_cols=194 Identities=24% Similarity=0.363 Sum_probs=159.5
Q ss_pred CceeeeccceEEEEEEECC---CcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeee--cCCeeEEEEeccC
Q 040845 532 NNLIGRGGFGSVYKARIRD---GMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCS--NEEFKALVLEYMP 606 (824)
Q Consensus 532 ~~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~lv~e~~~ 606 (824)
...||+|+||+||+|+.++ +..||+|.+... .....+.+|+++++.++||||+++++++. .+...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 3589999999999998653 578999988643 23346788999999999999999999884 3567889999996
Q ss_pred CCCHHHHhhhC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee----CCCCcEEEeecccc
Q 040845 607 HGSLEKYLHSS--------NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL----DDNMVAHLSDFGIA 674 (824)
Q Consensus 607 ~g~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~Dfg~a 674 (824)
+ +|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 4 787776432 135788899999999999999999 9999999999999999 56789999999999
Q ss_pred cccCCCCCc-cccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcc
Q 040845 675 KLLTGEDQS-MTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDE 731 (824)
Q Consensus 675 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~ 731 (824)
+........ .......+|+.|+|||.+.+. .++.++||||+||++|||+||++||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 876433221 122345689999999988764 579999999999999999999999865
No 287
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=8e-35 Score=307.68 Aligned_cols=250 Identities=28% Similarity=0.343 Sum_probs=204.2
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.+|.+.+.||+|+||.||+|... +++.||+|.+........+.+..|+.+++.++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 67888999999999999999754 58899999987554555677889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
++++|.+++.+. .+++.++..++.|++.|++||| +.+++|+|++|+||+++.++.++|+|||++........ .
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~--~ 171 (293)
T cd06647 99 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--K 171 (293)
T ss_pred CCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc--c
Confidence 999999998754 4788899999999999999999 99999999999999999999999999999876543322 2
Q ss_pred cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 686 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
.....+++.|+|||.+....++.++||||||+++||+++|+.||......+.....+ . ....
T Consensus 172 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~-~-----------------~~~~ 233 (293)
T cd06647 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-T-----------------NGTP 233 (293)
T ss_pred cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehh-c-----------------CCCC
Confidence 223458889999999988889999999999999999999999997532211100000 0 0000
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+...+..+.+++.+||..+|++||++.+++.+
T Consensus 234 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 234 ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011122345568899999999999999999999987
No 288
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=9.1e-35 Score=304.90 Aligned_cols=253 Identities=25% Similarity=0.334 Sum_probs=200.9
Q ss_pred hhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcC-CCCcceeEEeeeecCC------
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEE------ 596 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~------ 596 (824)
.+++|++.+.||+|++|.||+|..+ +++.||+|++.... ...+.+.+|+.+++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 4678999999999999999999875 57899999987543 3456788999999999 6999999999986544
Q ss_pred eeEEEEeccCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccc
Q 040845 597 FKALVLEYMPHGSLEKYLHSS---NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 673 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 673 (824)
..++||||+++++|.+++... ...+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++++|||.
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCcc
Confidence 589999999999999998653 257889999999999999999999 99999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccCcCC-----CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCC
Q 040845 674 AKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLP 748 (824)
Q Consensus 674 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 748 (824)
+....... .......++..|+|||.+.. ..++.++||||+|+++|+|++|+.||....... .........
T Consensus 160 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~-- 234 (275)
T cd06608 160 SAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-ALFKIPRNP-- 234 (275)
T ss_pred ceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-HHHHhhccC--
Confidence 87653221 12233458889999998753 346789999999999999999999986532111 111111100
Q ss_pred CcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 749 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
......+..++..+.+++.+||..||++|||+.|++++
T Consensus 235 ---------------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 235 ---------------PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred ---------------CCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00111122356678999999999999999999999864
No 289
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.7e-34 Score=300.87 Aligned_cols=253 Identities=30% Similarity=0.407 Sum_probs=203.3
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccc--hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGR--AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|+..+.||+|+||.||+|... +++.||+|.++..... ..+.+..|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5788899999999999999864 6899999998765432 567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||++++++.+||+|||.+..........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 81 CSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred CCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc
Confidence 99999999998754 5788899999999999999999 9999999999999999999999999999998765433221
Q ss_pred c--cccccccccccCccCcCCCC---CCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 685 T--QTQTLATIGYMAPEYGREGQ---VSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 685 ~--~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
. .....++..|+|||++.+.. ++.++||||||+++||+++|+.||...... ......... ..
T Consensus 157 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-~~~~~~~~~-~~----------- 223 (264)
T cd06626 157 GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-FQIMFHVGA-GH----------- 223 (264)
T ss_pred cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-HHHHHHHhc-CC-----------
Confidence 1 12345788999999988766 889999999999999999999999653211 111111110 00
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+....++..+.+++.+||+.+|++|||+.|++.+
T Consensus 224 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 224 ----KPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred ----CCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000111235668899999999999999999998753
No 290
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.8e-35 Score=310.85 Aligned_cols=248 Identities=26% Similarity=0.346 Sum_probs=199.4
Q ss_pred CCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 529 FSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
|.....||+|+||.||+|... ++..||||.+........+.+.+|+.+++.++|+||+++++.+...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 344467999999999999864 5889999998765555567788999999999999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
++|.+++... .+++.++..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++........ ...
T Consensus 104 ~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~ 176 (292)
T cd06658 104 GALTDIVTHT--RMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--KRK 176 (292)
T ss_pred CcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc--cCc
Confidence 9999998653 5788999999999999999999 99999999999999999999999999999876532221 122
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...++..|+|||...+..++.++||||||+++|||++|+.||....... .... +.... ....
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~-~~~~~--------~~~~-------- 238 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-AMRR-IRDNL--------PPRV-------- 238 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHhcC--------CCcc--------
Confidence 3458899999999988889999999999999999999999986521110 0110 00000 0000
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
......+..+.+++.+||..||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 239 KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0011235568899999999999999999999986
No 291
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.5e-34 Score=307.04 Aligned_cols=266 Identities=23% Similarity=0.306 Sum_probs=200.7
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccc-----hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGR-----AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
+|++.+.||+|+||.||+|... +++.||||.+...... ....+..|++++++++|+||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778899999999999999865 5899999998755322 234567899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||+ +++|.+++......+++.++..++.|+++||+||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 9999 88999999765546899999999999999999999 9999999999999999999999999999998764332
Q ss_pred CccccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcch--------
Q 040845 682 QSMTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTM-------- 752 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------- 752 (824)
. ......++..|+|||.+.+ ..++.++|||||||++|||++|.+||...... ................
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
T cd07841 157 R--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFEALGTPTEENWPGVTSL 233 (298)
T ss_pred c--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHHHcCCCchhhhhhcccc
Confidence 2 1223346788999998754 45789999999999999999998777542211 1111111110000000
Q ss_pred -hhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 -EVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 -~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
............ ........+..+.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 234 PDYVEFKPFPPTP-LKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccCCcc-hhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000000000 001112346778999999999999999999999984
No 292
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=6.9e-35 Score=308.04 Aligned_cols=245 Identities=26% Similarity=0.307 Sum_probs=201.3
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888999999999999999865 58999999986532 233466888999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC--
Confidence 9999999999997764 7899999999999999999999 999999999999999999999999999999865433
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
.....+++.|+|||.+.+...+.++||||+|+++|+|++|+.||...... .........
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~----------------- 213 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI-QIYEKILEG----------------- 213 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcC-----------------
Confidence 22345888999999998888899999999999999999999998653211 001110000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
....+...+..+.+++.+||..||.+|+ +++|++++
T Consensus 214 ---~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 214 ---KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred ---CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 0001112356688999999999999999 77887755
No 293
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.1e-34 Score=308.74 Aligned_cols=256 Identities=22% Similarity=0.272 Sum_probs=199.3
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|++.+.||+|+||.||+|..+ +++.||+|.+.... ....+.+.+|+++++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999865 47899999987543 223456778999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++++|.+++...+ .+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||.++.......
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 81 EYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 9999999999997655 6889999999999999999999 99999999999999999999999999998863211000
Q ss_pred -------------ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCC
Q 040845 683 -------------SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPI 749 (824)
Q Consensus 683 -------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 749 (824)
........++..|+|||.+....++.++|+||||+++||+++|..||.+.... ...........+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~-~~~~~~~~~~~~- 234 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-ELFGQVISDDIE- 234 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcccC-
Confidence 00111234688899999998888999999999999999999999998652211 111111110000
Q ss_pred cchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 750 STMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
.+ .....++..+.+++.+||+.||++||++.++.+.++.
T Consensus 235 ------~~----------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 235 ------WP----------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred ------CC----------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 00 0011345678999999999999999986555444443
No 294
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.1e-34 Score=303.10 Aligned_cols=254 Identities=25% Similarity=0.383 Sum_probs=201.8
Q ss_pred cCCCCceeeeccceEEEEEEE-CCCcEEEEEEeecccc------chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEE
Q 040845 528 KFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQCG------RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 600 (824)
+|+..+.||+|++|.||+|.. .+++.||+|++..... ...+.+..|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 478889999999999999985 4689999999864321 134678889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-cEEEeecccccccCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLTG 679 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~Dfg~a~~~~~ 679 (824)
||||+++++|.+++.+.. .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++ .++|+|||.+.....
T Consensus 81 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred EEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 999999999999997655 6889999999999999999999 99999999999999998776 699999999987643
Q ss_pred CCCc--cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 680 EDQS--MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 680 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
.... .......++..|+|||.+.+..++.++||||+|+++|++++|+.||....... ....+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~--------- 226 (268)
T cd06630 157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN-HLALIFKIASA--------- 226 (268)
T ss_pred ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc-hHHHHHHHhcc---------
Confidence 3211 11123457889999999988889999999999999999999999986422111 01111000000
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
......+...+..+.+++.+||..+|++||++.|++++
T Consensus 227 ------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 227 ------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred ------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 00011122356678899999999999999999999864
No 295
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.4e-34 Score=305.80 Aligned_cols=269 Identities=24% Similarity=0.333 Sum_probs=202.8
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
++|++.+.||+|+||.||+|.++ +++.||+|.++... ....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999876 48899999886432 2335678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|++++.+..+... ...+++.++..++.|++.|++||| +.+++|+|++|+||++++++.+||+|||.+........
T Consensus 81 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~- 155 (288)
T cd07833 81 YVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA- 155 (288)
T ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc-
Confidence 9988666655544 346899999999999999999999 99999999999999999999999999999987654332
Q ss_pred cccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchh--hhhhhhhCCCcchhhc--ccc
Q 040845 684 MTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTL--KHWVNDCLPISTMEVV--DAN 758 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~ 758 (824)
.......++..|+|||++.+. .++.++||||||+++|+|++|+.||......+... ..+... .+....... +..
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 234 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGP-LPPSHQELFSSNPR 234 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC-CCHHHhhhcccCcc
Confidence 122335678899999999888 78999999999999999999999987532211000 000000 000000000 000
Q ss_pred c--------cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 759 L--------LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 759 ~--------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
. ..........+..++.++.+++++||..+|++|||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 0 000000111122347789999999999999999999999864
No 296
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.2e-34 Score=300.51 Aligned_cols=248 Identities=25% Similarity=0.395 Sum_probs=200.7
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+..|++++++++|||++++++.+..+...++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 5788899999999999999864 58899999986542 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC-CcEEEeecccccccCCCCC
Q 040845 605 MPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 605 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~Dfg~a~~~~~~~~ 682 (824)
+++++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||+|+||+++++ +.+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence 99999999997643 45899999999999999999999 9999999999999999854 4689999999986643221
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||....... ....+....
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--~~~~~~~~~--------------- 217 (256)
T cd08220 158 ---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA--LVLKIMSGT--------------- 217 (256)
T ss_pred ---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH--HHHHHHhcC---------------
Confidence 122457889999999988889999999999999999999999986532111 111110000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+..++..+.+++.+||..+|++|||+.|++++
T Consensus 218 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 218 ---FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ---CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 000112345678999999999999999999999864
No 297
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.3e-35 Score=319.53 Aligned_cols=241 Identities=23% Similarity=0.257 Sum_probs=186.5
Q ss_pred eeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC---CCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 535 IGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI---RHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 535 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
||+|+||+||+|+.. +++.||||++.... .........|..++... +||||+++++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999865 58999999986432 12223344566666655 699999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++.... .+++..+..++.||++|++||| +.+|+||||||+||+++.++.++|+|||++........ ...
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~--~~~ 154 (330)
T cd05586 81 GELFWHLQKEG-RFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK--TTN 154 (330)
T ss_pred ChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC--Ccc
Confidence 99999987654 6899999999999999999999 99999999999999999999999999999875322211 123
Q ss_pred cccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhh
Q 040845 688 QTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIH 766 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (824)
...||..|+|||.+.+. .++.++||||+||++|||++|+.||...... .......... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~-----~~~~~i~~~~---------~~~---- 216 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ-----QMYRNIAFGK---------VRF---- 216 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH-----HHHHHHHcCC---------CCC----
Confidence 34689999999988754 4799999999999999999999998652211 1111100000 000
Q ss_pred hhhHHHHHHHHHHHHHHccccCCCCCC----CHHHHHHH
Q 040845 767 FVAKEQCVSFVFNLALECTVESPEQRI----NAKEIVAK 801 (824)
Q Consensus 767 ~~~~~~~~~~l~~l~~~cl~~dP~~Rp----t~~evl~~ 801 (824)
.....+..+.+++.+||+.||.+|| ++.|++++
T Consensus 217 --~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 217 --PKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred --CCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 0012355678999999999999998 56666654
No 298
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=343.02 Aligned_cols=257 Identities=28% Similarity=0.390 Sum_probs=209.1
Q ss_pred HHHhhccCCCCceeeeccceEEEEEE-ECCCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCee
Q 040845 522 LFQATDKFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFK 598 (824)
Q Consensus 522 ~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 598 (824)
+...+-+|+....||.|.||.||-|. ..+|.-.|+|-++... ......+.+|..++..++|||+|+++|+-...+..
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence 44556778889999999999999997 4569999999876553 34456788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 599 ALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
+|.||||++|+|.+.+...+ ..++.-...+..|++.|++||| +.|||||||||+||+++.+|.+|++|||.|..+.
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gr-i~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGR-IEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcc-hhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEec
Confidence 99999999999999998765 4566666778899999999999 9999999999999999999999999999999887
Q ss_pred CCCCcc--ccccccccccccCccCcCCC---CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchh
Q 040845 679 GEDQSM--TQTQTLATIGYMAPEYGREG---QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTME 753 (824)
Q Consensus 679 ~~~~~~--~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (824)
+..... .-....||+.|||||++.+. ....++||||+|||+.||+||++||...... -.+- ++
T Consensus 1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-~aIM--y~--------- 1453 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-WAIM--YH--------- 1453 (1509)
T ss_pred CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-hHHH--hH---------
Confidence 654332 22456799999999998754 3577899999999999999999999863221 1110 00
Q ss_pred hccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 754 VVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
+. .+.....|+..+.+-.+++..|+..||++|+++.|++++
T Consensus 1454 -V~------~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1454 -VA------AGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -Hh------ccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 00 111222344467788999999999999999999988775
No 299
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=6.5e-35 Score=308.88 Aligned_cols=248 Identities=25% Similarity=0.335 Sum_probs=199.5
Q ss_pred CCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 529 FSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
|+....||+|+||.||+|... +++.||+|++........+.+.+|+.+++.++|||++++++++..++..++|+||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 334457999999999999864 5899999998765445556788899999999999999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
++|.+++... .+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||++....... ....
T Consensus 103 ~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~ 175 (297)
T cd06659 103 GALTDIVSQT--RLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRK 175 (297)
T ss_pred CCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc--cccc
Confidence 9999987653 5789999999999999999999 9999999999999999999999999999987553221 1223
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...++..|+|||++.+..++.++|||||||++|||++|+.||...... ............. .
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~~----------------~ 237 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLRDSPPPK----------------L 237 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhccCCCC----------------c
Confidence 356889999999998888999999999999999999999998642111 1111111000000 0
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
......+..+.+++.+||+.+|++||++.|++++
T Consensus 238 ~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 238 KNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0011234568899999999999999999999986
No 300
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.7e-34 Score=306.05 Aligned_cols=247 Identities=27% Similarity=0.363 Sum_probs=198.1
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc---chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG---RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
..|+..+.||+|+||.||+|+.. +++.||+|.+..... ...+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888899999999999999865 589999999864322 23356788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||++ |++.+++......+++..+..++.|++.|+.||| +.+|+||||+|+||++++++.++|+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-- 168 (307)
T cd06607 95 EYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-- 168 (307)
T ss_pred HhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCC--
Confidence 9996 5888887765567899999999999999999999 999999999999999999999999999998754322
Q ss_pred ccccccccccccccCccCcC---CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 683 SMTQTQTLATIGYMAPEYGR---EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
....++..|+|||.+. .+.++.++||||||+++|||++|+.||....... .........+ +
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~--~~~~~~~~~~--------~-- 232 (307)
T cd06607 169 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYHIAQNDS--------P-- 232 (307)
T ss_pred ----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH--HHHHHhcCCC--------C--
Confidence 1235788999999874 4568899999999999999999999986532111 0000000000 0
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
...+..++..+.+++.+||..+|++||++.+++.+-
T Consensus 233 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 233 -------TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred -------CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 001123566789999999999999999999998853
No 301
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.8e-34 Score=304.36 Aligned_cols=253 Identities=29% Similarity=0.369 Sum_probs=206.5
Q ss_pred hhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
..+.|+..+.||+|++|.||+|.++ +++.||+|++..... ..+.+..|+++++.++|+|++++++++......++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4567888899999999999999876 589999999876543 45678889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|+++++|.+++......+++..+..++.|++.|++||| +.+++|+|++|+||+++.++.++|+|||.+........
T Consensus 96 ~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 171 (286)
T cd06614 96 YMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS- 171 (286)
T ss_pred ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh-
Confidence 99999999999876557899999999999999999999 99999999999999999999999999999876543221
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... .....+.....
T Consensus 172 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~-~~~~~~~~~~~---------------- 233 (286)
T cd06614 172 -KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL-RALFLITTKGI---------------- 233 (286)
T ss_pred -hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCC----------------
Confidence 112334778999999998888999999999999999999999998652111 11111100000
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....+..++..+.+++.+||+.+|.+||++.+++++
T Consensus 234 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 234 -PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred -CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0011122356678999999999999999999999864
No 302
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-36 Score=300.77 Aligned_cols=254 Identities=24% Similarity=0.336 Sum_probs=205.6
Q ss_pred cHHHHHHhh-ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeee
Q 040845 518 SYLELFQAT-DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSC 592 (824)
Q Consensus 518 ~~~~~~~~~-~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 592 (824)
.+.|....+ +.|..-++||+||||.||-++.+ +|+.||.|.+.+.. .........|-.|+++++.++||.+-.+|
T Consensus 175 K~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf 254 (591)
T KOG0986|consen 175 KWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF 254 (591)
T ss_pred HHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee
Confidence 334433333 55778899999999999999755 59999999875432 23345567899999999999999999999
Q ss_pred ecCCeeEEEEeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeec
Q 040845 593 SNEEFKALVLEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDF 671 (824)
Q Consensus 593 ~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 671 (824)
+..+..++|+..|.||+|.=+|...+ ..+++.+++.++.+|+.||++|| ..+||+||+||+|||+|+.|+++|+|.
T Consensus 255 eTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDL 331 (591)
T KOG0986|consen 255 ETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDL 331 (591)
T ss_pred cCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeecc
Confidence 99999999999999999988876654 57899999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcc
Q 040845 672 GIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIST 751 (824)
Q Consensus 672 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 751 (824)
|+|..+..... ..+.+||.+|||||++.++.|+...|.||+||++|||+.|+.||....+.. .
T Consensus 332 GLAvei~~g~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv----k---------- 394 (591)
T KOG0986|consen 332 GLAVEIPEGKP---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV----K---------- 394 (591)
T ss_pred ceEEecCCCCc---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh----h----------
Confidence 99998764432 344589999999999999999999999999999999999999997632211 0
Q ss_pred hhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCC
Q 040845 752 MEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRIN 794 (824)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt 794 (824)
.+.+|......+ ...++.+++++.++.+..++.||++|..
T Consensus 395 ~eEvdrr~~~~~---~ey~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 395 REEVDRRTLEDP---EEYSDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred HHHHHHHHhcch---hhcccccCHHHHHHHHHHHccCHHHhcc
Confidence 012222221111 1122457788999999999999999983
No 303
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.2e-34 Score=300.26 Aligned_cols=257 Identities=26% Similarity=0.316 Sum_probs=200.5
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeec--CCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSN--EEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 602 (824)
++|+..+.||.|++|.||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++.+ ....++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36788899999999999999875 589999999875432 345678899999999999999999999855 34789999
Q ss_pred eccCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 603 EYMPHGSLEKYLHS---SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 603 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
||+++++|.+++.. ....++...+..++.|+++|++||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999988753 2346788899999999999999999 99999999999999999999999999999875432
Q ss_pred CCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCccccc---CcchhhhhhhhhCCCcchhhcc
Q 040845 680 EDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFN---GEMTLKHWVNDCLPISTMEVVD 756 (824)
Q Consensus 680 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 756 (824)
... ....++..|+|||.+.+..++.++||||+|+++|||++|+.||+.... .......+....... ...+
T Consensus 158 ~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 230 (287)
T cd06621 158 SLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNP---ELKD 230 (287)
T ss_pred ccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCch---hhcc
Confidence 211 223467889999999888999999999999999999999999976422 111122222111000 0000
Q ss_pred ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 757 ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
.. ......+..+.+++.+||..+|++|||+.|++++=
T Consensus 231 -----~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~ 267 (287)
T cd06621 231 -----EP----GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHP 267 (287)
T ss_pred -----CC----CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCc
Confidence 00 00012356789999999999999999999998853
No 304
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.9e-34 Score=302.77 Aligned_cols=248 Identities=27% Similarity=0.418 Sum_probs=199.8
Q ss_pred cCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccc-cchhhhHHHHHHHHhcCC---CCcceeEEeeeecCCeeEEEE
Q 040845 528 KFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIR---HRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 602 (824)
.|+..+.||+|+||.||+|.+ .+++.||+|.++... ....+.+.+|+.+++.++ |||++++++++.+....++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477788999999999999986 468999999986542 334567888999999997 999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++++|.+++... .+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++++|||.+..+.....
T Consensus 82 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 82 EYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred ecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 999999999998654 6889999999999999999999 99999999999999999999999999999987654332
Q ss_pred ccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 683 SMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
......|+..|+|||.+.++ .++.++|+|||||++|+|++|+.||...... .+....... ..+..
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~~~~~-----~~~~~-- 222 (277)
T cd06917 157 --KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMMLIPKS-----KPPRL-- 222 (277)
T ss_pred --ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhccccC-----CCCCC--
Confidence 22334688899999988654 4689999999999999999999998753211 111000000 00000
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....++.++.+++.+||+.||++||++.|++++
T Consensus 223 -------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 223 -------EDNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred -------CcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 001145678999999999999999999999875
No 305
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.1e-34 Score=297.99 Aligned_cols=251 Identities=25% Similarity=0.346 Sum_probs=206.4
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
++|++.+.||+|++|.||+|+.+ +++.||||++..... .....+..|+.++.+++|+|++++++++..+...++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888999999999999999876 489999999876543 3457788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
+++++|.+++.... .+++..++.++.|+++|++||| + .+++|+||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 81 MDGGSLADLLKKVG-KIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 99999999998654 7899999999999999999999 8 99999999999999999999999999999866432222
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCccccc-CcchhhhhhhhhCCCcchhhccccccCc
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFN-GEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
.....++..|+|||.+.+..++.++|+||||+++|||++|+.||..... .......++.... .
T Consensus 157 --~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-----------~--- 220 (264)
T cd06623 157 --CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGP-----------P--- 220 (264)
T ss_pred --ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCC-----------C---
Confidence 1234578899999999988899999999999999999999999876432 1111111111000 0
Q ss_pred hhhhhhhHHH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 763 EDIHFVAKEQ-CVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...+.. ++..+.+++.+||..+|++||++.|++++
T Consensus 221 ----~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 ----PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ----CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 001112 56679999999999999999999999885
No 306
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.1e-34 Score=303.30 Aligned_cols=249 Identities=25% Similarity=0.304 Sum_probs=199.9
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccC
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMP 606 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 606 (824)
.|...+.||+|++|.||+|... +++.||+|++........+.+.+|+.+++.++|+||+++++++...+..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 3455579999999999999864 689999999865544445668889999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 040845 607 HGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQ 686 (824)
Q Consensus 607 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 686 (824)
+++|.+++.. ..+++.++..++.|++.|++||| +.+++||||+|+||+++.++.++++|||.+........ ..
T Consensus 100 ~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--~~ 172 (285)
T cd06648 100 GGALTDIVTH--TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--RR 172 (285)
T ss_pred CCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc--cc
Confidence 9999999877 35889999999999999999999 99999999999999999999999999998875432211 12
Q ss_pred ccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhh
Q 040845 687 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIH 766 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (824)
....++..|+|||...+..++.++|||||||++|||++|+.||..... . .......... +. .
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~----~-~~~~~~~~~~------~~-------~ 234 (285)
T cd06648 173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP----L-QAMKRIRDNL------PP-------K 234 (285)
T ss_pred ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH----H-HHHHHHHhcC------CC-------C
Confidence 234588999999999888899999999999999999999999865211 1 1111000000 00 0
Q ss_pred hhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 767 FVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 767 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...+..++..+.+++.+||+.+|++|||+.+++++
T Consensus 235 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 235 LKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred CcccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 00011245678999999999999999999999864
No 307
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.9e-34 Score=302.41 Aligned_cols=250 Identities=28% Similarity=0.363 Sum_probs=193.1
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHH-HhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAM-MKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
++|++.+.||+|+||.||+|+++ +|+.||+|+++.... .....+..|+.. ++..+||||+++++++..+...++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888999999999999999875 589999999875422 223344455554 667789999999999999999999999
Q ss_pred ccCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 604 YMPHGSLEKYLHS---SNYSLDIFQRLNIMIDVASALEYLHFGYSA-PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 604 ~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
|++ |+|.+++.. ....+++..++.++.|++.|++||| +. +++||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 688888754 2246899999999999999999999 76 999999999999999999999999999876532
Q ss_pred CCCccccccccccccccCccCcCC----CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhc
Q 040845 680 EDQSMTQTQTLATIGYMAPEYGRE----GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVV 755 (824)
Q Consensus 680 ~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (824)
. .......++..|+|||.+.+ ..++.++|+||+||++|||++|+.||..................
T Consensus 157 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------- 225 (283)
T cd06617 157 S---VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPS-------- 225 (283)
T ss_pred c---cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCC--------
Confidence 2 11223457889999998764 44688999999999999999999998653221111111111000
Q ss_pred cccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 756 DANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
+. .....++..+.+++.+||..+|++||++.+++++
T Consensus 226 -~~---------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 226 -PQ---------LPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred -CC---------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0011245678999999999999999999999874
No 308
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.2e-34 Score=296.51 Aligned_cols=250 Identities=30% Similarity=0.428 Sum_probs=205.3
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccC
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMP 606 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 606 (824)
+|+..+.||+|++|.||+|... ++..|++|++........+.+.+|+++++.++|++++++++++..+...++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4778899999999999999875 689999999876654456788999999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 040845 607 HGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQ 686 (824)
Q Consensus 607 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 686 (824)
+++|.+++......+++..+..++.|++.|++||| ..+++||||+|+||++++++.++|+|||.+........ .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~ 154 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---R 154 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---c
Confidence 99999999876557899999999999999999999 89999999999999999999999999999987643322 2
Q ss_pred ccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhh
Q 040845 687 TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIH 766 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (824)
....++..|+|||.+.+..++.++||||||+++|+|++|+.||........ ... ... ... ..
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~-~~~---~~~-------------~~ 216 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA-LFK-IAT---NGP-------------PG 216 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH-HHH-HHh---cCC-------------CC
Confidence 334578899999999888899999999999999999999999875321100 000 000 000 00
Q ss_pred hhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 767 FVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 767 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...+..++..+.+++.+||+.||++|||+.|++++
T Consensus 217 ~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 217 LRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cCcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00111135668999999999999999999999864
No 309
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.4e-34 Score=304.61 Aligned_cols=268 Identities=22% Similarity=0.271 Sum_probs=200.4
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecC--CeeEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNE--EFKALV 601 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 601 (824)
++|++.+.||+|+||.||+|+++ +++.||+|.++.... .....+.+|+.++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 57888999999999999999876 588999999875432 2233567899999999999999999998777 899999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||++ ++|.+++......+++.++..++.|++.||+||| +.+++|+||||+||+++.++.++|+|||.+.......
T Consensus 85 ~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred ehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 99996 5999998876657899999999999999999999 9999999999999999999999999999998764332
Q ss_pred CccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcc--------h
Q 040845 682 QSMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIST--------M 752 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--------~ 752 (824)
. ......++..|+|||.+.+. .++.++|+||+|+++|||++|+.||...... ............... .
T Consensus 161 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 161 K--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI-DQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred c--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchHHHHHhhcc
Confidence 1 22334578899999988654 4689999999999999999999998753221 111111110000000 0
Q ss_pred hhcc-ccc--cCchhhhhhhHHH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 EVVD-ANL--LSQEDIHFVAKEQ-CVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 ~~~~-~~~--~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.... ... ..........+.. .+..+.+++.+||+.+|++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000 000 0000000001111 36678999999999999999999999864
No 310
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.7e-34 Score=305.46 Aligned_cols=268 Identities=25% Similarity=0.295 Sum_probs=199.7
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecC--CeeEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNE--EFKAL 600 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 600 (824)
.++|++.+.||+|+||.||+|..+ +|+.||+|+++.... .....+.+|+.++++++|+||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467999999999999999999865 589999999865432 2233456799999999999999999998654 56899
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
||||++ ++|.+++......+++.++..++.|++.|++||| +.+++||||||+||++++++.+||+|||.+......
T Consensus 86 v~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 86 VMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 999996 4899998876567899999999999999999999 999999999999999999999999999999876433
Q ss_pred CCccccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhh----c
Q 040845 681 DQSMTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEV----V 755 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 755 (824)
.. ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||......+ ...... .......... .
T Consensus 162 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~ 237 (309)
T cd07845 162 AK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-QLDLII-QLLGTPNESIWPGFS 237 (309)
T ss_pred cC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-HhcCCCChhhchhhh
Confidence 21 2223346788999998865 457899999999999999999999987532111 111111 1111000000 0
Q ss_pred ccc---c--cCchhhhh--hhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 756 DAN---L--LSQEDIHF--VAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 756 ~~~---~--~~~~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
+.. . ........ ......+..+.+++.+|+..||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 0 00000000 0011236678899999999999999999999875
No 311
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.2e-34 Score=308.41 Aligned_cols=253 Identities=26% Similarity=0.374 Sum_probs=202.1
Q ss_pred ccCCCCceeeeccceEEEEEEECC-CcEEEEEEeecccc---chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQCG---RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
++|+..+.||+|+||.||+|...+ ++.||+|.+..... ...+.+..|+++++.++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 368888999999999999998754 89999999875432 24456888999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 603 EYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 9999999999987542 56899999999999999999999 9999999999999999999999999999987543221
Q ss_pred Ccc---------------------------ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCccccc
Q 040845 682 QSM---------------------------TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFN 734 (824)
Q Consensus 682 ~~~---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~ 734 (824)
... ......|+..|+|||++.+..++.++||||||+++|+|++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 110 11123578899999999888899999999999999999999999865322
Q ss_pred CcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCC----HHHHHHH
Q 040845 735 GEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRIN----AKEIVAK 801 (824)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt----~~evl~~ 801 (824)
.. ...... +... ........+..+.+++.+||..||++||| ++|++++
T Consensus 238 ~~-~~~~~~------------~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 238 DE-TFSNIL------------KKEV------TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred HH-HHHHHh------------cCCc------cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 11 111110 0000 00001114567999999999999999999 7777774
No 312
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.7e-34 Score=302.77 Aligned_cols=265 Identities=26% Similarity=0.332 Sum_probs=198.6
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|+..+.||.|++|.||+|+.. +|+.||||.+.... ......+..|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999865 58999999886543 22335688899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
+. ++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||+|+||++++++.+|++|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~- 155 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR- 155 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc-
Confidence 95 68998886543 46899999999999999999999 99999999999999999999999999999876532211
Q ss_pred cccccccccccccCccCcCCCC-CCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCC-cch-----hh--
Q 040845 684 MTQTQTLATIGYMAPEYGREGQ-VSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPI-STM-----EV-- 754 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~-----~~-- 754 (824)
......++..|+|||...+.. ++.++||||||+++|||+||+.||......+ ...+........ ... ..
T Consensus 156 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 156 -TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred -ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhhhhHHHH
Confidence 122334688999999876644 5889999999999999999999986532111 111111111000 000 00
Q ss_pred ---ccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 755 ---VDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 755 ---~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
..+... ..... ......+..+.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~-~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 234 YKPSFPKWA-RQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHhhccccc-ccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000000 00000 0012345678899999999999999999999864
No 313
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4e-34 Score=300.10 Aligned_cols=247 Identities=26% Similarity=0.376 Sum_probs=200.6
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
-|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++.++...++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 4667889999999999999864 58899999876432 233467888999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
++++|.+++... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++........ .
T Consensus 85 ~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~--~ 157 (277)
T cd06641 85 GGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--K 157 (277)
T ss_pred CCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccchh--h
Confidence 999999998754 5789999999999999999999 99999999999999999999999999999876543221 1
Q ss_pred cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 686 QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
.....++..|+|||.+.+..++.++|+|||||++|+|++|..||...... .....+.. ...
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~---~~~-------------- 218 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--KVLFLIPK---NNP-------------- 218 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--HHHHHHhc---CCC--------------
Confidence 22345788999999998888899999999999999999999998653211 11111000 000
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...+..++..+.+++.+||..+|++||++.+++++
T Consensus 219 -~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 219 -PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred -CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00112345678899999999999999999999996
No 314
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=287.59 Aligned_cols=241 Identities=22% Similarity=0.269 Sum_probs=199.6
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc---chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG---RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
.++|+..++||+|.||.|..++.+ +|+.||+|+++++.- .....-..|-.+++.-+||++..+-..|+..+..++|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 477889999999999999999865 589999999987642 3344456688999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||+.||.|.-++.+.+ .+++.....+..+|+.||.||| +++||.||+|.+|.++|.+|++||+|||+++.- -.
T Consensus 247 MeyanGGeLf~HLsrer-~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~--I~ 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER-VFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE--IK 320 (516)
T ss_pred EEEccCceEeeehhhhh-cccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhc--cc
Confidence 99999999998887765 6788888889999999999999 999999999999999999999999999999742 22
Q ss_pred CccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 682 QSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
........+||+.|.|||++....|+.++|.|.+||++|||++|+.||+...... +- +.+-
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k--LF------------eLIl----- 381 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK--LF------------ELIL----- 381 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH--HH------------HHHH-----
Confidence 2234455789999999999999999999999999999999999999998732211 00 0000
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCC
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRI 793 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 793 (824)
. .+...|...++++..|+...+..||.+|.
T Consensus 382 ~--ed~kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 382 M--EDLKFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred h--hhccCCccCCHHHHHHHHHHhhcChHhhc
Confidence 0 01112334566788999999999999998
No 315
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.4e-35 Score=329.59 Aligned_cols=253 Identities=26% Similarity=0.418 Sum_probs=191.6
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeee----------
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCS---------- 593 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~---------- 593 (824)
..+|+..++||+||||.||+++.+ ||+.||||++.... ......+.+|+..+++|+|||||+++..+.
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 356778899999999999999866 79999999987653 345667889999999999999999984210
Q ss_pred --------------------------------------------------------------------------------
Q 040845 594 -------------------------------------------------------------------------------- 593 (824)
Q Consensus 594 -------------------------------------------------------------------------------- 593 (824)
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence
Q ss_pred ----------------------cC-------CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 040845 594 ----------------------NE-------EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGY 644 (824)
Q Consensus 594 ----------------------~~-------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~ 644 (824)
+. ...||-||||+..++.+++++....-.....++++++|++||+|+|
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH--- 714 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH--- 714 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH---
Confidence 00 1357899999998888888776543357789999999999999999
Q ss_pred CCCeEecCCCCCCeeeCCCCcEEEeecccccccC----C------------CCCccccccccccccccCccCcCCC---C
Q 040845 645 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT----G------------EDQSMTQTQTLATIGYMAPEYGREG---Q 705 (824)
Q Consensus 645 ~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~----~------------~~~~~~~~~~~~~~~y~aPE~~~~~---~ 705 (824)
++|||||||||.||++|+++.|||+|||+|+... . .......+..+||.-|+|||++.+. .
T Consensus 715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~ 794 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK 794 (1351)
T ss_pred hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence 9999999999999999999999999999998732 0 1112245677899999999988755 4
Q ss_pred CCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHcc
Q 040845 706 VSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECT 785 (824)
Q Consensus 706 ~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 785 (824)
|+.|+|+||+|+|++||+. ||....+.-..+........|.. .+..++ ..+.-..+|++|+
T Consensus 795 Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~~---------------~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 795 YNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFDP---------------EHPEEASLIRWLL 855 (1351)
T ss_pred ccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-cccccc---------------cchHHHHHHHHHh
Confidence 9999999999999999984 45442222111111111111211 011111 1223457999999
Q ss_pred ccCCCCCCCHHHHHH
Q 040845 786 VESPEQRINAKEIVA 800 (824)
Q Consensus 786 ~~dP~~Rpt~~evl~ 800 (824)
+.||.+||||.|+++
T Consensus 856 ~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLN 870 (1351)
T ss_pred cCCCccCCCHHHHhh
Confidence 999999999999875
No 316
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=6.2e-34 Score=295.68 Aligned_cols=252 Identities=28% Similarity=0.388 Sum_probs=206.4
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecC--CeeEEEE
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNE--EFKALVL 602 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 602 (824)
+|...+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++|+||+++++.+.+. ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777899999999999999876 689999999876542 4467788999999999999999999999888 8999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+++++|.+++.... .+++.++..++.|++.|++||| +.+++|+|++|+||+++.++.++|+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 9999999999998766 7899999999999999999999 89999999999999999999999999999987654432
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
........++..|+|||...+..++.++||||||+++|++++|..||...... ....... ..
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~---------~~------ 218 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP---MAALYKI---------GS------ 218 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch---HHHHHhc---------cc------
Confidence 11223455888999999998888999999999999999999999998764311 0000000 00
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.......+...+..+.+++.+|+..+|++||++.|++++
T Consensus 219 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 219 SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 000011122336679999999999999999999999874
No 317
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=6.5e-34 Score=299.61 Aligned_cols=261 Identities=21% Similarity=0.259 Sum_probs=195.6
Q ss_pred CCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCC-CCcceeEEeeeecC--CeeEEEEe
Q 040845 529 FSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIR-HRNLVKVISSCSNE--EFKALVLE 603 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 603 (824)
|++.+.||+|+||.||+|+.. +++.||+|+++... .........|+.+++++. |+|++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567789999999999999864 58999999986542 222233456888898885 99999999999887 88999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|++ +++.+++......+++.++..++.|++.|++||| +.+++||||+|+||+++. +.+||+|||.+.........
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~ 155 (282)
T cd07831 81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY 155 (282)
T ss_pred cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCCCc
Confidence 996 5888888765557899999999999999999999 999999999999999999 99999999999865432221
Q ss_pred cccccccccccccCccCcC-CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcch----------
Q 040845 684 MTQTQTLATIGYMAPEYGR-EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTM---------- 752 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------- 752 (824)
....++..|+|||... ++.++.++||||+||++|||++|..||..... .....+..........
T Consensus 156 ---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 156 ---TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred ---CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 2245788999999764 45578999999999999999999999965321 1111111111111100
Q ss_pred --hhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 --EVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 --~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+...... . ......++..+.+++.+||..+|++||+++|++++
T Consensus 231 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 231 HMNYNFPSKKGTG-L-RKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccCccccccc-H-HHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00000000000 0 01112457889999999999999999999999875
No 318
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=5.2e-34 Score=305.65 Aligned_cols=270 Identities=23% Similarity=0.301 Sum_probs=199.6
Q ss_pred cCCCCceeeeccceEEEEEEEC---CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecC--CeeE
Q 040845 528 KFSENNLIGRGGFGSVYKARIR---DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNE--EFKA 599 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 599 (824)
+|++.+.||+|+||.||+|..+ +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778899999999999999865 37899999987632 33446678899999999999999999999887 8899
Q ss_pred EEEeccCCCCHHHHhhhCC----CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC----CCcEEEeec
Q 040845 600 LVLEYMPHGSLEKYLHSSN----YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD----NMVAHLSDF 671 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~----~~~~kl~Df 671 (824)
+||||+++ ++.+++.... ..+++..++.++.|++.|++||| +.+|+||||||+||+++. ++.+|++||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999965 7777765332 36788999999999999999999 999999999999999999 999999999
Q ss_pred ccccccCCCCC-ccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCc--------chhhh
Q 040845 672 GIAKLLTGEDQ-SMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGE--------MTLKH 741 (824)
Q Consensus 672 g~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~--------~~~~~ 741 (824)
|++........ ........++..|+|||.+.+. .++.++|||||||++|||++|+.||....... ..+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99987643322 1223345678899999987654 57899999999999999999999997643322 01111
Q ss_pred hhhhhCCC------------cchh---hccccccCchhhhhhhHH--HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 742 WVNDCLPI------------STME---VVDANLLSQEDIHFVAKE--QCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 742 ~~~~~~~~------------~~~~---~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
++...... .... .................. .....+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 11100000 0000 000000000000011111 345678999999999999999999999864
No 319
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-35 Score=281.32 Aligned_cols=256 Identities=21% Similarity=0.253 Sum_probs=201.3
Q ss_pred HHhhccCCCC-ceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcC-CCCcceeEEeeeec----C
Q 040845 523 FQATDKFSEN-NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-RHRNLVKVISSCSN----E 595 (824)
Q Consensus 523 ~~~~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~ 595 (824)
...+++|.+. ++||-|-.|.|..+..+ +|+.+|+|++.. ....++|++.--.. .|||||+++++|.+ .
T Consensus 57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 4567778765 57999999999999754 689999998742 24456777765544 69999999999754 4
Q ss_pred CeeEEEEeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC---CCCcEEEeec
Q 040845 596 EFKALVLEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD---DNMVAHLSDF 671 (824)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~Df 671 (824)
....+|||.|+||.|...++..+ ..+++.++..|++||+.|+.||| +..|.||||||+|+|.. .+..+|++||
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEeccc
Confidence 57789999999999999998766 57999999999999999999999 99999999999999996 4568999999
Q ss_pred ccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcc
Q 040845 672 GIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIST 751 (824)
Q Consensus 672 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 751 (824)
|+|+.-.. ........-|+.|.|||++...+|+...|+||+||++|-|++|.+||+..... .+..-.+..+....
T Consensus 209 GFAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~--aispgMk~rI~~gq 283 (400)
T KOG0604|consen 209 GFAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--AISPGMKRRIRTGQ 283 (400)
T ss_pred ccccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc--cCChhHHhHhhccC
Confidence 99985432 22334456899999999999999999999999999999999999999875431 11111111111111
Q ss_pred hhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 752 MEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
.+ .....+...++...++|+.+++.+|++|.|+.|++++=
T Consensus 284 y~-----------FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hp 323 (400)
T KOG0604|consen 284 YE-----------FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHP 323 (400)
T ss_pred cc-----------CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCc
Confidence 11 11123346788899999999999999999999998763
No 320
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.1e-34 Score=297.41 Aligned_cols=252 Identities=22% Similarity=0.327 Sum_probs=201.8
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeec--CCeeEEEE
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSN--EEFKALVL 602 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 602 (824)
+|++.+.||.|+||.||+|... +++.||+|.+.... ....+.+..|+++++.++|+||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4788899999999999999754 58899999986432 2334567889999999999999999998753 45678999
Q ss_pred eccCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHhhcCC--CCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 040845 603 EYMPHGSLEKYLHSS---NYSLDIFQRLNIMIDVASALEYLHFGY--SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 677 (824)
Q Consensus 603 e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 677 (824)
||+++++|.+++... ...+++..++.++.|++.|++|||..+ +.+++|+||+|+||++++++.+|++|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998754 357899999999999999999999443 678999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 678 TGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 678 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
..... ......++..|+|||.+.+..++.++|+||||+++|+|++|+.||..... ......+....
T Consensus 161 ~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~---------- 226 (265)
T cd08217 161 GHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--LQLASKIKEGK---------- 226 (265)
T ss_pred cCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--HHHHHHHhcCC----------
Confidence 43322 12234588999999999988899999999999999999999999876321 11111111100
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
. ...+...+..+.+++.+||..+|++||++.|++++
T Consensus 227 --~------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 227 --F------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred --C------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0 01122345678999999999999999999999875
No 321
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=5.1e-34 Score=300.54 Aligned_cols=266 Identities=27% Similarity=0.333 Sum_probs=198.9
Q ss_pred CCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 529 FSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
|++.+.||.|++|.||+|... +|+.||+|++.... ....+.+..|+++++.++|+|++++++++.++...++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 667889999999999999865 69999999987543 223356788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 606 PHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 606 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+ ++|.+++.... ..+++..+..++.|+++|++||| +.+++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-- 154 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR-- 154 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc--
Confidence 5 68999987654 46899999999999999999999 89999999999999999999999999999975532211
Q ss_pred ccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhC-CCcch-----hh--c
Q 040845 685 TQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCL-PISTM-----EV--V 755 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~-----~~--~ 755 (824)
......++..|+|||++.+. .++.++||||+|+++|||++|+.||....... ....+.+... +.... .. .
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhhhhhchhh
Confidence 12233568899999987654 46899999999999999999999986532111 1111111100 00000 00 0
Q ss_pred cccccCc-hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 756 DANLLSQ-EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 756 ~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....... ...........+..+.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 234 KPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000000 000001122345678999999999999999999999864
No 322
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1e-34 Score=301.29 Aligned_cols=248 Identities=27% Similarity=0.333 Sum_probs=202.5
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
+|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999876 58999999987542 2345678889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|+++++|.+++... ..+++.++..++.|+++|++||| +.+++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-- 154 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--
Confidence 99999999999766 47899999999999999999999 9999999999999999999999999999988654332
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
......++..|+|||.+.+..++.++|+||+|+++|+|++|..||...... ....+......
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~--------------- 216 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAKQET--------------- 216 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHHhcc---------------
Confidence 123345788999999998888999999999999999999999998763221 11111111000
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCH--HHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINA--KEIVA 800 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~--~evl~ 800 (824)
.....+...+..+.+++.+||..||.+||++ +|+++
T Consensus 217 -~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 217 -ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred -ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 0011122345778999999999999999999 66553
No 323
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=310.03 Aligned_cols=274 Identities=26% Similarity=0.368 Sum_probs=207.0
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecC------CeeE
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNE------EFKA 599 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~ 599 (824)
.|...+.||+||||.||+|+.+ +|+.||||.++... ....+...+|+++|++++|+|||+++++-++. ....
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 3556678999999999999954 69999999997654 34456778899999999999999999986543 3667
Q ss_pred EEEeccCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC--CCC--cEEEeeccc
Q 040845 600 LVLEYMPHGSLEKYLHSSN--YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD--DNM--VAHLSDFGI 673 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~--~~~--~~kl~Dfg~ 673 (824)
+|||||.+|+|+..+.+.. .++++.+.+.++.+++.|+.||| +.+||||||||.||++- ++| --||+|||+
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 9999999999999998655 78999999999999999999999 99999999999999983 334 359999999
Q ss_pred ccccCCCCCccccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhh-hhhhhh-CCCc
Q 040845 674 AKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLK-HWVNDC-LPIS 750 (824)
Q Consensus 674 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~-~~~~~~-~~~~ 750 (824)
|+.+.++. .....+||..|.+||.... +.|+..+|.|||||++||++||..||........... .|.... .+..
T Consensus 171 Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 171 ARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred cccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 99875444 4566789999999999984 8899999999999999999999999987544322111 111111 1111
Q ss_pred chhhccccccC--chhhhhhhHH----HHHHHHHHHHHHccccCCCCCC--CHHHHHHHHHHHHH
Q 040845 751 TMEVVDANLLS--QEDIHFVAKE----QCVSFVFNLALECTVESPEQRI--NAKEIVAKLLKIRD 807 (824)
Q Consensus 751 ~~~~~~~~~~~--~~~~~~~~~~----~~~~~l~~l~~~cl~~dP~~Rp--t~~evl~~L~~~~~ 807 (824)
..-..+....+ .....++++. .....+-.++..++..+|++|. .+.+....+.++.+
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 11111111110 0011111111 2334466788889999999999 88888888887765
No 324
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=8.6e-34 Score=303.15 Aligned_cols=270 Identities=22% Similarity=0.311 Sum_probs=197.3
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecCC------
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNEE------ 596 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 596 (824)
.++|++.+.||+|+||.||+|... +++.||||.+..... .....+.+|++++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 467999999999999999999865 589999998865422 22335567999999999999999999986654
Q ss_pred --eeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccc
Q 040845 597 --FKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 674 (824)
Q Consensus 597 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 674 (824)
..++||||++ +++.+++......+++.++..++.|++.|++||| +.+++|+||||+||+++.++.+||+|||.+
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 4599999996 5888888766557899999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCCc--cccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhh---CC
Q 040845 675 KLLTGEDQS--MTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDC---LP 748 (824)
Q Consensus 675 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~---~~ 748 (824)
......... .......++..|+|||.+.+. .++.++||||||+++|||++|+.||...... .....+... .+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~--~~~~~~~~~~~~~~ 244 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ--HQLTLISQLCGSIT 244 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCC
Confidence 866433221 112234578899999987654 4688999999999999999999998653211 111111110 00
Q ss_pred Ccc------hhhccccccCchh----hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 749 IST------MEVVDANLLSQED----IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 749 ~~~------~~~~~~~~~~~~~----~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
... .+..+........ .....+......+.+++.+||..||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000 0000000000000 0000011124567899999999999999999999865
No 325
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=256.65 Aligned_cols=267 Identities=25% Similarity=0.306 Sum_probs=201.0
Q ss_pred cCCCCceeeeccceEEEEEEE-CCCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|+..++||+|.||+||+|+. .+++.||+|.++.... .......+|+.+++.++|.|||+++++...++...+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 566678999999999999984 4588999999876643 3456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
|+ .+|..+.......++.+.+..++.|+++|+.++| ++.+.|||+||.|.++..+|++|++|||+|+-+.-+-.
T Consensus 83 cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgipvr-- 156 (292)
T KOG0662|consen 83 CD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR-- 156 (292)
T ss_pred hh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE--
Confidence 95 4999999887778999999999999999999999 99999999999999999999999999999987643222
Q ss_pred ccccccccccccCccCcCCCC-CCccchHHHHHHHHHHHHhCCCC-CcccccCcchhhhhhhhhC-CCc-----chhhcc
Q 040845 685 TQTQTLATIGYMAPEYGREGQ-VSTNGDVYSFGIMLMETFTRKKP-TDELFNGEMTLKHWVNDCL-PIS-----TMEVVD 756 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~tg~~p-~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~ 756 (824)
-.+..+.|.+|++|+++.+.. |+...|+||-||++.|+.....| |.+... +..+..+.+... +.. .....|
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv-ddqlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-DDQLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH-HHHHHHHHHHhCCCccccCCccccCCC
Confidence 234456899999999988765 78899999999999999885555 333211 112222211111 100 111111
Q ss_pred ccccCchh--hhhh-hHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 757 ANLLSQED--IHFV-AKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 757 ~~~~~~~~--~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
-....... .... .-+.....=++++++.+.-+|.+|.+|++++++
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 11111100 0000 001223345689999999999999999998765
No 326
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-35 Score=277.35 Aligned_cols=252 Identities=23% Similarity=0.292 Sum_probs=198.1
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEEe
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 603 (824)
++.+....||.|+.|.||+++.+ +|...|||.+..... +..+++...+.++..- .+|.||+.+|+|..+...++.||
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 33455678999999999999876 489999999876532 3345566666665544 48999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
.|. ..++.++.+...++++..+-++...++.||.||.+ +++|+|||+||+|||+|+.|++|+||||++.++.+...
T Consensus 172 lMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA- 247 (391)
T KOG0983|consen 172 LMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA- 247 (391)
T ss_pred HHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecccc-
Confidence 994 47788888777788888888999999999999986 88999999999999999999999999999988754433
Q ss_pred cccccccccccccCccCcCC---CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 684 MTQTQTLATIGYMAPEYGRE---GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
.+...|-+.|||||.+.. ..|+.++||||||+.++|+.||+.||..-...-..+....+.
T Consensus 248 --htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~--------------- 310 (391)
T KOG0983|consen 248 --HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE--------------- 310 (391)
T ss_pred --cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc---------------
Confidence 344568889999998753 468999999999999999999999997622211111221111
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 761 SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+.....+++.+.+++..|++.|+.+||...++++|
T Consensus 311 --ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 311 --EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred --CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 111222223367789999999999999999999998875
No 327
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.3e-35 Score=308.64 Aligned_cols=244 Identities=26% Similarity=0.426 Sum_probs=193.9
Q ss_pred CceeeeccceEEEEEEEC-CCcEEEEEEeecc----ccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCe--eEEEEec
Q 040845 532 NNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQ----CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEF--KALVLEY 604 (824)
Q Consensus 532 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e~ 604 (824)
..+||+|+|-+||+|.+. +|..||=-.++.. ..+..+++..|+.+|+.|+|+||++++.+|.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 457999999999999754 4777763222211 23445889999999999999999999999977654 7799999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC-CCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
+..|+|..|..+.+ ..+...+..|++||+.||.|||+. .++|+|||||-+||+++ ..|.|||+|.|+|+.....
T Consensus 125 ~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s--- 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS--- 199 (632)
T ss_pred ccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc---
Confidence 99999999999887 788999999999999999999954 78999999999999997 5699999999999976432
Q ss_pred cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 684 MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
.....+|||.|||||... ..|++.+||||||++++||+|+..||.+=...-.-+.+......|.....+-
T Consensus 200 -~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~-------- 269 (632)
T KOG0584|consen 200 -HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVK-------- 269 (632)
T ss_pred -ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccC--------
Confidence 233478999999999886 7899999999999999999999999875222111112222222222222222
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.+++.++|.+|+.. .++|||+.|++++
T Consensus 270 ----------dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 270 ----------DPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ----------CHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 24578999999999 8999999999864
No 328
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.3e-33 Score=294.01 Aligned_cols=250 Identities=21% Similarity=0.257 Sum_probs=196.4
Q ss_pred HHHHHhhccCCCCcee--eeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcC-CCCcceeEEeeeecC
Q 040845 520 LELFQATDKFSENNLI--GRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-RHRNLVKVISSCSNE 595 (824)
Q Consensus 520 ~~~~~~~~~~~~~~~l--g~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 595 (824)
.+.....++|++.+.+ |+|+||.||++..+ ++..+|+|.+........ |+.....+ +|+||+++++++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecC
Confidence 3444555777877776 99999999999854 588999999864322111 22222222 699999999999999
Q ss_pred CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-cEEEeecccc
Q 040845 596 EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFGIA 674 (824)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~Dfg~a 674 (824)
+..++||||+++++|.+++.... .+++.++..++.|+++|++||| +.+++||||||+||+++.++ .++++|||.+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 99999999999999999998765 7899999999999999999999 99999999999999999988 9999999998
Q ss_pred cccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhh
Q 040845 675 KLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEV 754 (824)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (824)
...... ....++..|+|||++.+..++.++||||+|+++|||++|+.||......+.....+.....
T Consensus 158 ~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------- 224 (267)
T PHA03390 158 KIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ------- 224 (267)
T ss_pred eecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc-------
Confidence 765322 1234788999999999888999999999999999999999999854433333333322110
Q ss_pred ccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCC-HHHHHHH
Q 040845 755 VDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRIN-AKEIVAK 801 (824)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-~~evl~~ 801 (824)
.....+..++..+.+++.+||+.+|++||+ ++|++++
T Consensus 225 ----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 225 ----------KKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred ----------ccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 000111235667899999999999999996 5888754
No 329
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.4e-33 Score=297.46 Aligned_cols=267 Identities=25% Similarity=0.331 Sum_probs=200.7
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
+|+..+.||+|++|.||+|+.. +|+.||||+++.... ...+.+.+|+++++.++|+||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788899999999999999875 589999999875532 23456778999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 606 PHGSLEKYLHSSN--YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 606 ~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
++ +|.+++.... ..+++..+..++.|++.|++||| +.+++||||+|+||++++++.++++|||++........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 75 8988886544 46899999999999999999999 89999999999999999999999999999976532211
Q ss_pred cccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhC-CCc-ch-hhcc---
Q 040845 684 MTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCL-PIS-TM-EVVD--- 756 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~--- 756 (824)
......++..|+|||.+.+. .++.++||||+||++||+++|+.||......+ .......... +.. .. ...+
T Consensus 156 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 156 -TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred -ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhHHHHhcCch
Confidence 12234568899999987654 56889999999999999999999987532211 1111111000 000 00 0000
Q ss_pred --ccccCch-hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 757 --ANLLSQE-DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 757 --~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....... .......+.++..+.+++.+|++.||++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000 00011112456778999999999999999999999864
No 330
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=9.5e-34 Score=300.44 Aligned_cols=266 Identities=24% Similarity=0.301 Sum_probs=196.7
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCC-CCcceeEEeeeecCCe-----
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIR-HRNLVKVISSCSNEEF----- 597 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 597 (824)
++|++.+.||+|+||.||+|.+. +++.||+|.++.... .....+.+|+.++++++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999865 589999998765432 23456788999999995 6999999999877665
Q ss_pred eEEEEeccCCCCHHHHhhhCC----CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-CCcEEEeecc
Q 040845 598 KALVLEYMPHGSLEKYLHSSN----YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFG 672 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~Dfg 672 (824)
.++||||+++ +|.+++.... ..+++..++.++.||+.||+||| +.+|+||||+|+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999975 8988886532 35799999999999999999999 999999999999999998 8999999999
Q ss_pred cccccCCCCCccccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcc
Q 040845 673 IAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIST 751 (824)
Q Consensus 673 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 751 (824)
.+..+..... ......+++.|+|||++.+ ..++.++||||||+++|||++|..||........ ........ ....
T Consensus 157 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~-~~~~ 232 (295)
T cd07837 157 LGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ-LLHIFKLL-GTPT 232 (295)
T ss_pred cceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHh-CCCC
Confidence 9876532211 1223356888999998765 4578999999999999999999999865322111 11111100 0000
Q ss_pred hhhc-------c---ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 752 MEVV-------D---ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 752 ~~~~-------~---~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.... + .......... ...+..+..+.+++.+||..||++||++.|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 233 EQVWPGVSKLRDWHEFPQWKPQDLS-RAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhhCcchhhccchhhcCcccchhHH-HhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 0 0000000000 0112456779999999999999999999999864
No 331
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=8.7e-34 Score=299.49 Aligned_cols=267 Identities=25% Similarity=0.326 Sum_probs=201.1
Q ss_pred CCCCceeeeccceEEEEEEECC-CcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecC--CeeEEEEe
Q 040845 529 FSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNE--EFKALVLE 603 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 603 (824)
|++.+.||+|+||.||+|+..+ ++.||+|++.... ......+.+|+++++.++|+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 5678899999999999998764 8999999997653 33345678899999999999999999999887 89999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|+++ +|.+++......+++.++..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~- 155 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS- 155 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc-
Confidence 9975 899998776557899999999999999999999 89999999999999999999999999999987644321
Q ss_pred cccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCc---chhhcc---
Q 040845 684 MTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIS---TMEVVD--- 756 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--- 756 (824)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... .............. .....+
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchhhccccccchh
Confidence 12233456788999997764 45789999999999999999999998753221 11111111000000 000000
Q ss_pred -----ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 757 -----ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 757 -----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
................++..+.+++.+||..+|++||++.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000000011111236789999999999999999999999864
No 332
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.2e-33 Score=302.46 Aligned_cols=247 Identities=28% Similarity=0.395 Sum_probs=198.3
Q ss_pred CCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 529 FSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
|+..+.||+|+||.||+|+.. ++..||+|.+.... .+....+..|+++++.++|+|++++++++.++...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 667789999999999999864 58899999986432 22345688899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+. |++.+.+......+++.++..++.|++.|+.||| +.+|+||||+|+||+++.++.++|+|||++......
T Consensus 107 ~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~---- 178 (317)
T cd06635 107 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA---- 178 (317)
T ss_pred CC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCCc----
Confidence 96 5888887665667899999999999999999999 999999999999999999999999999988754321
Q ss_pred ccccccccccccCccCcC---CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 685 TQTQTLATIGYMAPEYGR---EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
....++..|+|||++. .+.++.++|||||||++|||++|+.||..... ......+.....+
T Consensus 179 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-~~~~~~~~~~~~~------------- 242 (317)
T cd06635 179 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESP------------- 242 (317)
T ss_pred --ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHhccCC-------------
Confidence 2235788999999873 45689999999999999999999999865311 1111111111000
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
......++..+.+++.+||+.+|.+||++.+++++...
T Consensus 243 -----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 243 -----TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred -----CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 00112345668999999999999999999999987654
No 333
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=279.04 Aligned_cols=269 Identities=21% Similarity=0.315 Sum_probs=210.1
Q ss_pred cHHHHHHhhccCCCCceeeeccceEEEEEE-ECCCcEEEEEEeeccccchhhhHHHHHHHHhcC-CCCcceeEEeeeecC
Q 040845 518 SYLELFQATDKFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-RHRNLVKVISSCSNE 595 (824)
Q Consensus 518 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 595 (824)
.|++..+.++ ++||+|+|+.|--+. ..+|.+||||++.+.......++.+|++++..- .|+||++++++|+++
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 3677777665 689999999999885 778999999999888777888999999999988 499999999999999
Q ss_pred CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC---CcEEEeecc
Q 040845 596 EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN---MVAHLSDFG 672 (824)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~Dfg 672 (824)
+.+|+|||-|.||+|..+++... .+++.++.++.++|+.||.+|| .+||.|||+||+|||-... ..+||+||.
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~-~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfD 224 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRK-HFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFD 224 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhh-hccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccc
Confidence 99999999999999999998776 6899999999999999999999 9999999999999998644 358999999
Q ss_pred cccccCCCC-----CccccccccccccccCccCcC-----CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhh
Q 040845 673 IAKLLTGED-----QSMTQTQTLATIGYMAPEYGR-----EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHW 742 (824)
Q Consensus 673 ~a~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~ 742 (824)
++.-..-.. ........+|+..|||||+.. ...|+.++|.||+|||+|-|++|.+||.+.-..+ .-|
T Consensus 225 LgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~d---CGW 301 (463)
T KOG0607|consen 225 LGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGAD---CGW 301 (463)
T ss_pred cccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCc---CCc
Confidence 876443211 122233456888999999642 3358899999999999999999999998754321 223
Q ss_pred hhhhCCCc----chhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 743 VNDCLPIS----TMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 743 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.+...-.. ..+.+......-+ ...+...+.+..+++...+..|+.+|.++.+++.+
T Consensus 302 drGe~Cr~CQ~~LFesIQEGkYeFP---dkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 302 DRGEVCRVCQNKLFESIQEGKYEFP---DKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred cCCCccHHHHHHHHHHHhccCCcCC---hhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 22211111 1111111111111 11234678889999999999999999999999873
No 334
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=8.9e-34 Score=297.44 Aligned_cols=242 Identities=22% Similarity=0.295 Sum_probs=187.7
Q ss_pred eeeeccceEEEEEEEC-CCcEEEEEEeecccc---chhhhHHHHHHHHh---cCCCCcceeEEeeeecCCeeEEEEeccC
Q 040845 534 LIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG---RAFKSFDVECAMMK---SIRHRNLVKVISSCSNEEFKALVLEYMP 606 (824)
Q Consensus 534 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~---~l~h~niv~l~~~~~~~~~~~lv~e~~~ 606 (824)
+||+|+||.||+|... +++.||+|.+..... .....+.+|..+++ ..+|++|+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999864 589999998864321 11223344444333 3479999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 040845 607 HGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQ 686 (824)
Q Consensus 607 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 686 (824)
+++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||++++++.++++|||++....... .
T Consensus 81 ~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~----~ 152 (279)
T cd05633 81 GGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----P 152 (279)
T ss_pred CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----c
Confidence 999999987655 6899999999999999999999 9999999999999999999999999999987543221 1
Q ss_pred ccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 687 TQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
....++..|+|||.... ..++.++||||+||++|||++|..||......... ....... . .
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~---~~~~~~~------------~---~ 214 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---EIDRMTL------------T---V 214 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH---HHHHHhh------------c---C
Confidence 23458999999998864 45789999999999999999999999753322111 0100000 0 0
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
....+..++..+.+++.+||..||++|| +++|++++
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 0011233566789999999999999999 69999886
No 335
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.3e-33 Score=303.57 Aligned_cols=267 Identities=22% Similarity=0.331 Sum_probs=196.2
Q ss_pred ceeeec--cceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRG--GFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
..||+| +||+||+|++. +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 99999999864 69999999986542 22346788899999999999999999999999999999999999
Q ss_pred CCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc--
Q 040845 608 GSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM-- 684 (824)
Q Consensus 608 g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-- 684 (824)
+++.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 99999987643 35888999999999999999999 9999999999999999999999999998654432211110
Q ss_pred ---ccccccccccccCccCcCCC--CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhC--------CCcc
Q 040845 685 ---TQTQTLATIGYMAPEYGREG--QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCL--------PIST 751 (824)
Q Consensus 685 ---~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--------~~~~ 751 (824)
......++..|+|||++.+. .++.++||||+||++|||++|+.||.................. +...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 01112345679999998764 4789999999999999999999999764332211111000000 0000
Q ss_pred hhh-----------cccc-------ccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 752 MEV-----------VDAN-------LLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 752 ~~~-----------~~~~-------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
... .+.. .......+...+..++..+.+++.+||..||++|||+.|++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~ 309 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHA 309 (328)
T ss_pred hhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCH
Confidence 000 0000 00001112223345778899999999999999999999998653
No 336
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=6.8e-34 Score=306.92 Aligned_cols=273 Identities=22% Similarity=0.284 Sum_probs=200.5
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCCCCcceeEEeeeecC-----Cee
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIRHRNLVKVISSCSNE-----EFK 598 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 598 (824)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.++++++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999864 58999999986432 23456678899999999999999999987543 357
Q ss_pred EEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 599 ALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
++|+||++ +++.+++... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEehhcc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 99999996 4888887543 5889999999999999999999 9999999999999999999999999999998654
Q ss_pred CCCCc-cccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhh--
Q 040845 679 GEDQS-MTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEV-- 754 (824)
Q Consensus 679 ~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 754 (824)
..... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... ...............+.
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~ 235 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL--HQLNLILGVLGTPSQEDLN 235 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCCHHHHH
Confidence 32211 12233467899999998654 46899999999999999999999998652211 11111111111100000
Q ss_pred --ccccc-------cCchhhhh-hhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHHH
Q 040845 755 --VDANL-------LSQEDIHF-VAKEQCVSFVFNLALECTVESPEQRINAKEIVAK--LLKIR 806 (824)
Q Consensus 755 --~~~~~-------~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~ 806 (824)
.+... ........ ......+..+.+++.+||+.+|++|||+.|++++ ++...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 00000 00000000 0112346678999999999999999999999998 55443
No 337
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.5e-34 Score=296.41 Aligned_cols=249 Identities=23% Similarity=0.333 Sum_probs=200.4
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|++.+.||+|+||.||+|..+ +|..||+|.+.... ....+.+.+|+++++.++|+||+++++.+.+....++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999875 48899999986542 23345778899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-cEEEeecccccccCCCCC
Q 040845 605 MPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 605 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~Dfg~a~~~~~~~~ 682 (824)
+++++|.+++.+.. ..+++..+..++.|+++|++||| +.+++|+||+|+||++++++ .++++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 99999999987643 35789999999999999999999 99999999999999999876 469999999986643221
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
......|+..|+|||+..+..++.++|+||||+++||+++|+.||..... ..++.........
T Consensus 158 --~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~---------- 220 (257)
T cd08225 158 --LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-----HQLVLKICQGYFA---------- 220 (257)
T ss_pred --cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHhcccCC----------
Confidence 12234588899999999888899999999999999999999999865221 1111111110000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
......+..+.+++.+||..+|++|||+.|++++
T Consensus 221 -----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 221 -----PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred -----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0011234568999999999999999999999875
No 338
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.1e-33 Score=298.92 Aligned_cols=258 Identities=20% Similarity=0.272 Sum_probs=186.4
Q ss_pred ccCCCCceeeeccceEEEEEEECC----CcEEEEEEeeccccchh-----------hhHHHHHHHHhcCCCCcceeEEee
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRD----GMEVAVKVFNLQCGRAF-----------KSFDVECAMMKSIRHRNLVKVISS 591 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l~~~ 591 (824)
.+|.+.+.||+|+||.||+|.+.+ +..+|+|+......... .....+...+..+.|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 679999999999999999998654 34667776433221110 111223345566789999999997
Q ss_pred eecCC----eeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEE
Q 040845 592 CSNEE----FKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAH 667 (824)
Q Consensus 592 ~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 667 (824)
+.... ..++++|++. .++.+.+.... ..++..+..++.|++.|++||| +.+|+||||||+||+++.++.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~~ 166 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNRGY 166 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcEE
Confidence 65443 4468888874 46776665433 4578888999999999999999 99999999999999999999999
Q ss_pred EeecccccccCCCCCc-----cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhh
Q 040845 668 LSDFGIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHW 742 (824)
Q Consensus 668 l~Dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~ 742 (824)
|+|||+|+.+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ....
T Consensus 167 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~-~~~~ 245 (294)
T PHA02882 167 IIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN-LIHA 245 (294)
T ss_pred EEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH-HHHH
Confidence 9999999876432211 111234589999999999999999999999999999999999999976422111 1110
Q ss_pred hhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 743 VNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
... +....... .......++..+.+++..||+.+|++||+++++++.+
T Consensus 246 ~~~-------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 246 AKC-------DFIKRLHE-----GKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred hHH-------HHHHHhhh-----hhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 000 00000000 0001124567799999999999999999999999875
No 339
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.3e-33 Score=300.47 Aligned_cols=271 Identities=26% Similarity=0.308 Sum_probs=201.6
Q ss_pred HhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecCC----
Q 040845 524 QATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNEE---- 596 (824)
Q Consensus 524 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 596 (824)
...++|++.+.||+|+||.||+|..+ +|+.||+|.++.... .....+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999876 489999999875432 23356778999999999999999999987654
Q ss_pred ------eeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEee
Q 040845 597 ------FKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 670 (824)
Q Consensus 597 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 670 (824)
..++|+||+++ ++.+.+......+++..+..++.|++.|++||| +.+|+|+||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCc
Confidence 78999999975 787877765557899999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCccccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCC
Q 040845 671 FGIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPI 749 (824)
Q Consensus 671 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 749 (824)
||.+........ .......++..|+|||.+.+ ..++.++||||+||++|||++|++||..... ...+..........
T Consensus 160 fg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~~~~~~~~~~~~ 237 (302)
T cd07864 160 FGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQLELISRLCGSP 237 (302)
T ss_pred ccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCC
Confidence 999987643332 12223346778999998764 3578999999999999999999999875321 11111111110000
Q ss_pred ---cchhhc--------cccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 750 ---STMEVV--------DANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 750 ---~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...++. +....... ........++..+.+++.+||+.||++||++.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRR-RLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred Chhhccccccccccccccccccccc-chhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000000 00000000 0001111346779999999999999999999999864
No 340
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2e-33 Score=296.05 Aligned_cols=266 Identities=24% Similarity=0.278 Sum_probs=202.8
Q ss_pred CCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccc--hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 529 FSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGR--AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
|++.+.||+|++|.||+|... +++.+|+|.+...... ....+..|++++++++|+||+++++++......++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999865 5899999998654322 3567888999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
++ ++.+++......+++.++..++.|++.|++||| +.+|+|+||+|+||+++.++.++|+|||.+....... ..
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~~ 154 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--RP 154 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--cc
Confidence 65 898888776567899999999999999999999 9999999999999999999999999999998764432 12
Q ss_pred cccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCC---Ccchhhcc---cc
Q 040845 686 QTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLP---ISTMEVVD---AN 758 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~ 758 (824)
.....++..|+|||.+.+. .++.++|+||+|+++|+|+||+.||......+ ........... .......+ ..
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCchHhcccchhhhhhh
Confidence 2334578899999988776 78999999999999999999999986532111 01110000000 00000000 00
Q ss_pred ---ccC-chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 759 ---LLS-QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 759 ---~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
... .........+.++..+.+++.+||..||.+||++.+++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000 0000011233567889999999999999999999999864
No 341
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.6e-34 Score=321.44 Aligned_cols=272 Identities=18% Similarity=0.191 Sum_probs=191.6
Q ss_pred hhccCCCCceeeeccceEEEEEEECC--CcEEEEEEe--------------ec---cccchhhhHHHHHHHHhcCCCCcc
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIRD--GMEVAVKVF--------------NL---QCGRAFKSFDVECAMMKSIRHRNL 585 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~--------------~~---~~~~~~~~~~~E~~~l~~l~h~ni 585 (824)
..++|++.+.||+|+||+||+|.++. +..+++|.+ .. ........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 35789999999999999999987542 222222211 00 112234567889999999999999
Q ss_pred eeEEeeeecCCeeEEEEeccCCCCHHHHhhhCC----CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC
Q 040845 586 VKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN----YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD 661 (824)
Q Consensus 586 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~ 661 (824)
+++++++...+..|+|+|++. +++.+++.... ......++..++.|++.||+||| +.+|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEC
Confidence 999999999999999999994 57877775432 12345667889999999999999 99999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccC--cchh
Q 040845 662 DNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNG--EMTL 739 (824)
Q Consensus 662 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~--~~~~ 739 (824)
.++.+||+|||++..+..... .......||..|+|||++.+..++.++|||||||++|||++|+.++.....+ ...+
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~ 380 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL 380 (501)
T ss_pred CCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH
Confidence 999999999999987643222 1223356899999999999989999999999999999999988654321111 1111
Q ss_pred hhhhhhh------CCCcc---hhhccccccC---chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 740 KHWVNDC------LPIST---MEVVDANLLS---QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 740 ~~~~~~~------~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.+.+... .+... .+.++..... ............+..+.+++.+|++.||.+|||+.|++++
T Consensus 381 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 381 LKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 1111110 11100 0111100000 0001111112345567889999999999999999999875
No 342
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.5e-33 Score=293.67 Aligned_cols=251 Identities=22% Similarity=0.316 Sum_probs=198.9
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-----cchhhhHHHHHHHHhcCCCCcceeEEeeeecC--Cee
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-----GRAFKSFDVECAMMKSIRHRNLVKVISSCSNE--EFK 598 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 598 (824)
.+|++.+.||+|+||.||+|+.. ++..||+|.+.... ......+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 57889999999999999999864 58999999875321 23346788899999999999999999998654 467
Q ss_pred EEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 599 ALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
++|+||+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+||||+||+++.++.++|+|||.+....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 89999999999999987654 5788999999999999999999 9999999999999999999999999999998653
Q ss_pred CCCC-ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 679 GEDQ-SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 679 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
.... ........++..|+|||.+.+..++.++|+|||||++||+++|+.||........ ..+.. .
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~----~--------- 223 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA-IFKIA----T--------- 223 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH-HHHHH----c---------
Confidence 2111 1112234588899999999888899999999999999999999999875321110 11100 0
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.......+...+..+.+++.+||+ +|.+||++.+++.|
T Consensus 224 -----~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 224 -----QPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred -----CCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 000011223456678999999999 57999999998765
No 343
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.5e-33 Score=301.70 Aligned_cols=267 Identities=21% Similarity=0.267 Sum_probs=195.9
Q ss_pred CCceeeeccceEEEEEEECCCcEEEEEEeecc--ccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCC
Q 040845 531 ENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQ--CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHG 608 (824)
Q Consensus 531 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 608 (824)
+.+.+|.|+++.||++.. +++.||||++... .....+.+..|+++++.++|+||+++++++.+.+..+++|||+++|
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 334445555555555544 5899999998754 2345577899999999999999999999999999999999999999
Q ss_pred CHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc----
Q 040845 609 SLEKYLHSS-NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS---- 683 (824)
Q Consensus 609 ~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~---- 683 (824)
+|.+++... ...+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+|++|||.+.........
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 999999764 346888999999999999999999 999999999999999999999999999988765432221
Q ss_pred -cccccccccccccCccCcCCC--CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCC----cch----
Q 040845 684 -MTQTQTLATIGYMAPEYGREG--QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPI----STM---- 752 (824)
Q Consensus 684 -~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~---- 752 (824)
.......++..|+|||++... .++.++|||||||++|||++|+.||............ .....+. ...
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEK-VRGTVPCLLDKSTYPLYE 240 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhccCccccccCchhhhc
Confidence 111233467789999988653 5789999999999999999999999764322211111 1110000 000
Q ss_pred -hhcc-----ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 753 -EVVD-----ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 753 -~~~~-----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
.... ....................+.+++.+||..||++|||++|++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 241 DSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred CCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 0000 0000011111222334567899999999999999999999998864
No 344
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6e-34 Score=307.06 Aligned_cols=270 Identities=23% Similarity=0.298 Sum_probs=200.9
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeec----CCee
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSN----EEFK 598 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 598 (824)
.++|++.+.||+|+||.||+|..+ +|+.||+|++.... ......+..|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 478999999999999999999865 58999999986542 2334567789999999999999999998753 3567
Q ss_pred EEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 599 ALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
++||||++ ++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+|||++....
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEehhh-hhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 99999995 68999987654 5899999999999999999999 9999999999999999999999999999997654
Q ss_pred CCCCc--cccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhc
Q 040845 679 GEDQS--MTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVV 755 (824)
Q Consensus 679 ~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (824)
..... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||....... ....+.........+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~--~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH--QLKLILSVLGSPSEEVL 236 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH--HHHHHHHHhCCChhHhh
Confidence 32221 11223468889999998765 458999999999999999999999996532111 11111111110000000
Q ss_pred cc-----------cccCchhhh-hhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 756 DA-----------NLLSQEDIH-FVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 756 ~~-----------~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
+. ......... .......+..+.+++.+||+.+|++|||+.+++.+-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 00 000000000 001123467799999999999999999999998863
No 345
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.3e-33 Score=292.44 Aligned_cols=248 Identities=29% Similarity=0.411 Sum_probs=203.7
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|++.+.||+|++|.||+|+.. +++.||+|.+..... ...+.+.+|++++++++|+|++++++++.+....++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4788899999999999999865 578999999876543 3557789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+++++|.+++.... .+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 155 (254)
T cd06627 81 AENGSLRQIIKKFG-PFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD- 155 (254)
T ss_pred CCCCcHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc-
Confidence 99999999997764 7899999999999999999999 999999999999999999999999999999876543321
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchh
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
.....++..|+|||...+..++.++||||+|+++|+|++|+.||..... ..........
T Consensus 156 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~---------------- 214 (254)
T cd06627 156 -DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFRIVQD---------------- 214 (254)
T ss_pred -ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHHHhcc----------------
Confidence 2334578899999998887889999999999999999999999865321 1111110000
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....+..++..+.+++.+||..+|++|||+.|++.+
T Consensus 215 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 215 DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 0001112345678899999999999999999999853
No 346
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.6e-33 Score=295.59 Aligned_cols=244 Identities=23% Similarity=0.313 Sum_probs=193.0
Q ss_pred eeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCH
Q 040845 535 IGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSL 610 (824)
Q Consensus 535 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 610 (824)
||+|+||+||+|..+ +|+.||+|.+.... ......+..|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999754 58999999986432 22344567899999999999999999999999999999999999999
Q ss_pred HHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccccc
Q 040845 611 EKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQT 689 (824)
Q Consensus 611 ~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 689 (824)
.+++.... ..+++.++..++.|++.|+.||| +.+++||||+|+||++++++.++|+|||.+...... ......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~~~ 154 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---KKIKGR 154 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC---Cccccc
Confidence 99987644 36899999999999999999999 999999999999999999999999999998765321 112234
Q ss_pred cccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhh
Q 040845 690 LATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVA 769 (824)
Q Consensus 690 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (824)
.++..|+|||...+..++.++||||+|+++|+|++|+.||....... .......... . .....
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~-------------~---~~~~~ 217 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEELKRRTL-------------E---MAVEY 217 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHHHhccc-------------c---ccccC
Confidence 57889999999988889999999999999999999999986532211 0111100000 0 00011
Q ss_pred HHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 770 KEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 770 ~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
+..++..+.+++.+||+.||++|| ++.+++++
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 218 PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred CccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 123466789999999999999999 66666653
No 347
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.5e-33 Score=293.36 Aligned_cols=242 Identities=26% Similarity=0.341 Sum_probs=195.5
Q ss_pred eeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCH
Q 040845 535 IGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSL 610 (824)
Q Consensus 535 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 610 (824)
||.|++|.||+|+.. +++.||+|++.... ....+.+..|+.+++.++||||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999875 48999999986542 23446788999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccccccc
Q 040845 611 EKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTL 690 (824)
Q Consensus 611 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 690 (824)
.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||.+....... ......
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~ 153 (262)
T cd05572 81 WTILRDRG-LFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFC 153 (262)
T ss_pred HHHHhhcC-CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cccccc
Confidence 99997654 5889999999999999999999 9999999999999999999999999999998764332 122345
Q ss_pred ccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhH
Q 040845 691 ATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAK 770 (824)
Q Consensus 691 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 (824)
++..|+|||.+.+..++.++|+||+|+++|||++|..||....... ........ + .......+
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~--------~------~~~~~~~~ 216 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYNDIL--------K------GNGKLEFP 216 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHHHHh--------c------cCCCCCCC
Confidence 7889999999888889999999999999999999999997643211 11111100 0 00011112
Q ss_pred HHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 040845 771 EQCVSFVFNLALECTVESPEQRIN-----AKEIVA 800 (824)
Q Consensus 771 ~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~ 800 (824)
..++..+.+++.+||..+|++||+ ++|+++
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 223567899999999999999999 666665
No 348
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.8e-33 Score=298.25 Aligned_cols=253 Identities=25% Similarity=0.308 Sum_probs=196.7
Q ss_pred hccCCCCceeeeccceEEEEEEECC-CcEEEEEEeecccc-chhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQCG-RAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 602 (824)
.++|++.+.||+|+||.||+|.+++ ++.||||.++.... .....+..|+.++.+. .|+||+++++++.++...++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3678889999999999999999865 89999999875422 2334556677766666 4999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
||++ +++.++.......+++..+..++.|++.|++||| + .+|+||||+|+||++++++.+||+|||++..+....
T Consensus 94 e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 94 ELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred eccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 9995 5788887665557899999999999999999999 6 599999999999999999999999999987654322
Q ss_pred CccccccccccccccCccCcCCCC----CCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 682 QSMTQTQTLATIGYMAPEYGREGQ----VSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
. .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.........+..+.....+.
T Consensus 170 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-------- 238 (296)
T cd06618 170 A---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPS-------- 238 (296)
T ss_pred c---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCC--------
Confidence 1 12234778899999887553 78899999999999999999999865222111111111110000
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
......++.++.+++.+||..||++||++.+++++-
T Consensus 239 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 239 ---------LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred ---------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 000012456789999999999999999999998774
No 349
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.3e-33 Score=306.92 Aligned_cols=265 Identities=22% Similarity=0.239 Sum_probs=198.2
Q ss_pred HhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecC-----
Q 040845 524 QATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNE----- 595 (824)
Q Consensus 524 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 595 (824)
...++|+..+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|+.++++++|+||+++++++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 34678999999999999999999864 68999999986432 23345677899999999999999999988543
Q ss_pred -CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccc
Q 040845 596 -EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 674 (824)
Q Consensus 596 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 674 (824)
...++||||++ ++|.+.+... ++..++..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 35799999995 5888887643 788899999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCC--Ccch
Q 040845 675 KLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLP--ISTM 752 (824)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~ 752 (824)
....... ......++..|+|||.+.+..++.++||||+||++|+|++|+.||...... ............ ....
T Consensus 166 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 241 (353)
T cd07850 166 RTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIEQLGTPSDEFM 241 (353)
T ss_pred eeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCCHHHH
Confidence 8653221 122345788999999999889999999999999999999999998643110 001111000000 0000
Q ss_pred h-----------------------hccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 E-----------------------VVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 ~-----------------------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
+ ......... .....+...+..+.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPP--DSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHhhhhhhHHhhcCCCCCCcchhhhCcccccCc--ccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 000000000 0000011345678999999999999999999999976
No 350
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.3e-33 Score=305.06 Aligned_cols=269 Identities=26% Similarity=0.325 Sum_probs=200.0
Q ss_pred hhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecc--ccchhhhHHHHHHHHhcC-CCCcceeEEeeeecC--Cee
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQ--CGRAFKSFDVECAMMKSI-RHRNLVKVISSCSNE--EFK 598 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~ 598 (824)
..++|++.+.||+|+||.||+|... +++.||+|++... .......+.+|+.+++++ +|+||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567889999999999999999865 5889999987532 123345577899999999 999999999998643 468
Q ss_pred EEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 599 ALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
++||||++ ++|.+++... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||.+....
T Consensus 85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 99999996 5999988764 6788899999999999999999 9999999999999999999999999999998765
Q ss_pred CCCCc---cccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCc----
Q 040845 679 GEDQS---MTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIS---- 750 (824)
Q Consensus 679 ~~~~~---~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---- 750 (824)
..... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+. ............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIEVIGPPSAEDI 237 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHH
Confidence 43322 22234568899999998754 4578999999999999999999999865322111 111111000000
Q ss_pred -------chhhccccccCc-hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 751 -------TMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 751 -------~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....+...... ..... ....++.++.+++.+||+.||++|||+.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDE-LLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhh-hccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000000000000 00000 111256789999999999999999999999986
No 351
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=8.7e-34 Score=299.52 Aligned_cols=253 Identities=26% Similarity=0.310 Sum_probs=193.3
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc-cchhhhHHHHHHHHhcCC-CCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC-GRAFKSFDVECAMMKSIR-HRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|+..+.||+|+||.||++... +++.||+|.+.... ......+..|+.++.++. |+||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4556678999999999999865 58999999986543 234556788999999996 99999999999999999999999
Q ss_pred cCCCCHHHHh---hh-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 605 MPHGSLEKYL---HS-SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 605 ~~~g~L~~~l---~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
++. ++.++. .. ....+++..+..++.|++.|++|||+ +.+++||||||+||+++.++.++|+|||++......
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 854 655543 22 22468999999999999999999992 359999999999999999999999999999765432
Q ss_pred CCccccccccccccccCccCcCCC---CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREG---QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
.. .....++..|+|||.+.+. .++.++||||+||++|||++|+.||..... .... ........ .+
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~-~~~~~~~~-----~~ 229 (288)
T cd06616 162 IA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS---VFDQ-LTQVVKGD-----PP 229 (288)
T ss_pred Cc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch---HHHH-HhhhcCCC-----CC
Confidence 21 1223578899999998766 689999999999999999999999865321 0010 11000000 00
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.. ....+..++..+.+++.+||+.+|++|||+.|++++
T Consensus 230 ~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 230 IL------SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred cC------CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 000112356779999999999999999999999886
No 352
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.3e-33 Score=297.27 Aligned_cols=267 Identities=25% Similarity=0.311 Sum_probs=196.6
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
++|++.+.||+|++|+||+|..+ +|+.||+|.+..... ...+.+..|++++++++|+||+++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57889999999999999999875 589999998864422 234567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-CCcEEEeecccccccCCCC
Q 040845 604 YMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~Dfg~a~~~~~~~ 681 (824)
|++ +++.+++.... ...++..+..++.|++.|++||| +.+++|+||+|+||+++. ++.+||+|||++.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 996 58888775433 34678888999999999999999 999999999999999985 5679999999997543221
Q ss_pred CccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhc-----
Q 040845 682 QSMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVV----- 755 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 755 (824)
.......++..|+|||.+.+. .++.++||||+|+++|+|+||+.||......+.... ... ..........
T Consensus 158 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 158 --RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFK-IFR-ILGTPNEETWPGVTS 233 (294)
T ss_pred --cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHH-HhCCCChhhcccccc
Confidence 112234578899999987654 578999999999999999999999865322111111 000 0000000000
Q ss_pred --ccc--ccC-chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 756 --DAN--LLS-QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 756 --~~~--~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
+.. ... ............+..+.+++.+|++.+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 234 LPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred chhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 000 0000000112345678999999999999999999999874
No 353
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1e-33 Score=305.55 Aligned_cols=276 Identities=24% Similarity=0.282 Sum_probs=204.5
Q ss_pred hhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecc--ccchhhhHHHHHHHHhcCCCCcceeEEeeeecC-----C
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQ--CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNE-----E 596 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 596 (824)
..++|.+.+.||+|+||+||+|+.. +++.||||.+... .......+.+|+.+++.++|+||+++++++... .
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 3467999999999999999999854 5899999998643 223345677899999999999999999987543 3
Q ss_pred eeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 040845 597 FKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 676 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 676 (824)
..++|+||++ ++|.+++.... .+++..+..++.|++.|+.||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 5799999995 68999887654 6899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCCCccccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCC--cch-
Q 040845 677 LTGEDQSMTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPI--STM- 752 (824)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~- 752 (824)
..... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||..... .............. ...
T Consensus 158 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07858 158 TSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY-VHQLKLITELLGSPSEEDLG 234 (337)
T ss_pred cCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHHHHHhCCCChHHhh
Confidence 54322 12233457889999998764 4689999999999999999999999865311 11111111100000 000
Q ss_pred hhccccc--------cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHHHHh
Q 040845 753 EVVDANL--------LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK--LLKIRDS 808 (824)
Q Consensus 753 ~~~~~~~--------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~~~ 808 (824)
...+... .............++..+.+++.+||+.+|++|||++|++++ ++.+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 235 FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred hcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 0000000 000000011123467789999999999999999999999998 7665443
No 354
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3e-33 Score=290.31 Aligned_cols=249 Identities=27% Similarity=0.378 Sum_probs=204.4
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|++.+.||+|+||.||+|.+. ++..||+|++..... .....+.+|+++++.++|+|++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4788899999999999999865 589999999875532 4556788899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 605 MPHGSLEKYLHSSN---YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 605 ~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
+++++|.+++.... ..+++.++..++.+++.|++||| +.+++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999998752 57899999999999999999999 8999999999999999999999999999998654332
Q ss_pred CccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 682 QSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
.......+++.|+|||...+..++.++|+||+|+++|+|++|+.||...... .......... ..
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~~~--------~~- 221 (258)
T cd08215 158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL-----ELALKILKGQ--------YP- 221 (258)
T ss_pred --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH-----HHHHHHhcCC--------CC-
Confidence 1222345788999999998888999999999999999999999998653211 1111110000 00
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
..+..++..+.+++.+||..+|++|||+.|++++
T Consensus 222 ------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 222 ------PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0011345678999999999999999999999864
No 355
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.5e-33 Score=295.87 Aligned_cols=245 Identities=26% Similarity=0.332 Sum_probs=197.2
Q ss_pred CceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCH
Q 040845 532 NNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSL 610 (824)
Q Consensus 532 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 610 (824)
...||+|+||.||+|..+ +++.||||++..........+..|+.+++.++|+|++++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 357999999999999864 6899999998654444566788899999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccccccc
Q 040845 611 EKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTL 690 (824)
Q Consensus 611 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 690 (824)
.+++... .+++..+..++.|++.|++||| +.+++||||+|+||++++++.++++|||.+........ ......
T Consensus 105 ~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~~~~~ 177 (292)
T cd06657 105 TDIVTHT--RMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLV 177 (292)
T ss_pred HHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceecccccc--cccccc
Confidence 9987543 4788999999999999999999 89999999999999999999999999999876533221 123345
Q ss_pred ccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhH
Q 040845 691 ATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAK 770 (824)
Q Consensus 691 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 (824)
++..|+|||.+.+..++.++|+||+|+++|||++|..||..... ...........+.. . ...
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~~~--------~--------~~~ 239 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPPK--------L--------KNL 239 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhCCcc--------c--------CCc
Confidence 78899999999888889999999999999999999999865211 11111111111100 0 001
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 771 EQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 771 ~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
..++..+.+++.+||..+|.+||++.|++++
T Consensus 240 ~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 240 HKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred ccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 1234567899999999999999999999885
No 356
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=8.5e-34 Score=295.75 Aligned_cols=245 Identities=28% Similarity=0.362 Sum_probs=195.4
Q ss_pred eeeccceEEEEEEECC-CcEEEEEEeecccc---chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCH
Q 040845 535 IGRGGFGSVYKARIRD-GMEVAVKVFNLQCG---RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSL 610 (824)
Q Consensus 535 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 610 (824)
||+|+||.||+|...+ |+.||+|++..... ...+.+.+|++++++++|+||+++++.+......++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999998764 89999999865432 3456788899999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC------cc
Q 040845 611 EKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ------SM 684 (824)
Q Consensus 611 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~------~~ 684 (824)
.+++...+ .+++..+..++.|+++||+||| +.+++|+||+|+||++++++.++|+|||++........ ..
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence 99998765 7899999999999999999999 99999999999999999999999999999875432211 11
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchh
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
......++..|+|||......++.++||||||+++||+++|..||...... ..........
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~~~-------------- 217 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-----EIFQNILNGK-------------- 217 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhcCC--------------
Confidence 223345788999999998888999999999999999999999998653211 1111000000
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
.........+..+.+++.+||+.+|++|||+.++.+.|
T Consensus 218 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 218 IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 00000001256789999999999999999995555444
No 357
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.9e-33 Score=291.46 Aligned_cols=247 Identities=26% Similarity=0.345 Sum_probs=202.0
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+|++.+.||+|+||.||+++.. +++.+|+|.+.... ......+.+|+++++.++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778899999999999999754 58899999987542 23345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 605 MPHGSLEKYLHSS---NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 605 ~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
+++++|.+++... ...+++..++.++.|++.|++||| +.+++|+||+|.||++++++.+|++|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999998662 246889999999999999999999 999999999999999999999999999999876433
Q ss_pred CccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 682 QSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
......++..|+|||...+..++.++|+||+|+++||+++|+.||...... .....+.. ...
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~------------~~~- 218 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYKVQR------------GKY- 218 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhc------------CCC-
Confidence 122345788999999998888999999999999999999999998753211 11111100 000
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...+..++.++.+++.+|+..+|++||++.|++++
T Consensus 219 -----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 219 -----PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred -----CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00112456678999999999999999999999875
No 358
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.6e-34 Score=299.34 Aligned_cols=251 Identities=26% Similarity=0.337 Sum_probs=207.3
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccc--hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGR--AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
...|.+.+.||+|.|+.|..|++. ++..||||.+++..-. ....+.+|+++|+.++|||||+++.+...+...|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 467889999999999999999754 5999999998765432 3355889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+.+|.+.+++...+ ...+.++..++.|+.+|++||| ++.|||||||++||+++.+..+||+|||++..+....
T Consensus 135 eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~- 209 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL- 209 (596)
T ss_pred EeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeecccc-
Confidence 9999999999999887 3445888999999999999999 9999999999999999999999999999999885332
Q ss_pred ccccccccccccccCccCcCCCCC-CccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQV-STNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
......|++.|.|||++.+..| ++++|+||+|+++|-++.|..||++..-.+.. ++.+..
T Consensus 210 --~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr-----------------~rvl~g 270 (596)
T KOG0586|consen 210 --MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELR-----------------PRVLRG 270 (596)
T ss_pred --cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccccc-----------------chheee
Confidence 2334569999999999998876 78999999999999999999999873221110 011111
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
. .-.+.....++.+++++++..+|.+|++.+++.++-..
T Consensus 271 k----~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 271 K----YRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred e----ecccceeechhHHHHHHhhccCccccCCHHHhhhhccc
Confidence 1 11112234557889999999999999999999887554
No 359
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.9e-33 Score=298.04 Aligned_cols=249 Identities=27% Similarity=0.385 Sum_probs=197.9
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecc---ccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQ---CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
+.|+..+.||+|+||.||+|+.. ++..||+|.+... ......++.+|+++++.++|+|++++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34666788999999999999865 4788999988643 1233456778999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
||+. |++.+++......+++.++..++.|++.|++||| +.+++||||+|+||+++.++.++++|||++......
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-- 168 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 168 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCc--
Confidence 9996 6888887665557899999999999999999999 999999999999999999999999999998765322
Q ss_pred ccccccccccccccCccCcC---CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccc
Q 040845 683 SMTQTQTLATIGYMAPEYGR---EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANL 759 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (824)
....++..|+|||.+. .+.++.++|||||||++|||++|+.||...... .....+.....+
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~----------- 232 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNESP----------- 232 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-HHHHHHhhcCCC-----------
Confidence 2235788999999874 356788999999999999999999998652111 111111111000
Q ss_pred cCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 760 LSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
......++..+.+++.+||..+|++||++.+++++-.-
T Consensus 233 -------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~ 270 (308)
T cd06634 233 -------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270 (308)
T ss_pred -------CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence 00112345668899999999999999999999987553
No 360
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.7e-33 Score=291.01 Aligned_cols=241 Identities=24% Similarity=0.309 Sum_probs=186.6
Q ss_pred ceeeeccceEEEEEEEC-CCcEEEEEEeecccc---chhhhHHHHHHH-HhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 533 NLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG---RAFKSFDVECAM-MKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+.||+|+||.||+|... +|+.||||++..... .....+..|..+ ....+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56899999999999864 589999999864321 112234445444 4455899999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
++|.+++.... .+++..+..++.|++.||.||| +.+++||||+|+||++++++.++|+|||++..... ..
T Consensus 82 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~~ 151 (260)
T cd05611 82 GDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------NK 151 (260)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc------cc
Confidence 99999997654 6889999999999999999999 89999999999999999999999999999875432 12
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
...++..|+|||.+.+..++.++||||+|+++|||++|..||....... .......... . ...
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~-------------~---~~~ 214 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-VFDNILSRRI-------------N---WPE 214 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhccc-------------C---CCC
Confidence 3357889999999988888999999999999999999999986532111 0011000000 0 000
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINAKEIVA 800 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 800 (824)
.....++..+.+++.+||+.+|++||++.++.+
T Consensus 215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred cccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 011235677899999999999999997754433
No 361
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=4.4e-33 Score=298.85 Aligned_cols=267 Identities=25% Similarity=0.307 Sum_probs=199.1
Q ss_pred HHhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeec-CCee
Q 040845 523 FQATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSN-EEFK 598 (824)
Q Consensus 523 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 598 (824)
...+++|++.+.||+|+||.||+|... +++.||||.+.... ....+.+..|+++++.++||||+++++++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 456789999999999999999999755 68999999875432 2334677889999999999999999999865 5678
Q ss_pred EEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 599 ALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
++|+||+ +++|.+++... .+++..+..++.|+++|++||| +.+|+||||+|+||++++++.++|+|||.+....
T Consensus 86 ~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~ 159 (328)
T cd07856 86 YFVTELL-GTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQD 159 (328)
T ss_pred EEEeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccccC
Confidence 8999999 56898888643 4778888899999999999999 9999999999999999999999999999987542
Q ss_pred CCCCccccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchh-----------hhhhhhh
Q 040845 679 GEDQSMTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTL-----------KHWVNDC 746 (824)
Q Consensus 679 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~-----------~~~~~~~ 746 (824)
.. .....++..|+|||.+.+ ..++.++||||+|+++|||++|+.||...... ... .+|....
T Consensus 160 ~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd07856 160 PQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV-NQFSIITDLLGTPPDDVINTI 233 (328)
T ss_pred CC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhc
Confidence 21 122356788999998765 56899999999999999999999998653211 011 1111111
Q ss_pred CCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 747 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
......+...................++..+.+++.+||+.+|++|||+.+++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 234 CSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred cchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1000001100000000000000011346789999999999999999999999876
No 362
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=5.1e-33 Score=291.66 Aligned_cols=242 Identities=23% Similarity=0.306 Sum_probs=187.4
Q ss_pred eeeeccceEEEEEEEC-CCcEEEEEEeecccc---chhhhHHHHH---HHHhcCCCCcceeEEeeeecCCeeEEEEeccC
Q 040845 534 LIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG---RAFKSFDVEC---AMMKSIRHRNLVKVISSCSNEEFKALVLEYMP 606 (824)
Q Consensus 534 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~---~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 606 (824)
.||+|+||.||+|... +++.||+|.+..... .....+..|. ..++...||+|+++++++...+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999764 589999999865321 1112233333 34455679999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 040845 607 HGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQ 686 (824)
Q Consensus 607 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 686 (824)
+++|.+++.... .+++.++..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++..+.... .
T Consensus 81 g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~----~ 152 (278)
T cd05606 81 GGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----P 152 (278)
T ss_pred CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----C
Confidence 999999987654 6899999999999999999999 9999999999999999999999999999987653221 1
Q ss_pred ccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhh
Q 040845 687 TQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDI 765 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (824)
....|+..|+|||.+.++ .++.++||||+||++|||++|+.||............... .. .
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~----------------~ 214 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--LT----------------M 214 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh--hc----------------c
Confidence 223588999999998754 5899999999999999999999999764221110000000 00 0
Q ss_pred hhhhHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 766 HFVAKEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 766 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
....+..++..+.+++.+|+..+|++|| ++.|++++
T Consensus 215 ~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 215 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 0011123456789999999999999999 99999864
No 363
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.7e-33 Score=300.84 Aligned_cols=269 Identities=22% Similarity=0.298 Sum_probs=197.4
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecC------C
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNE------E 596 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 596 (824)
.++|...+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++|+||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999864 58999999986432 22345678899999999999999999998654 3
Q ss_pred eeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 040845 597 FKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 676 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 676 (824)
..++|+||+.. ++.++.. ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||++..
T Consensus 94 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~ 166 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARH 166 (342)
T ss_pred eEEEEeccccc-CHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence 46899999964 7776653 25788999999999999999999 99999999999999999999999999999875
Q ss_pred cCCCCCccccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhh-CC-Ccchh
Q 040845 677 LTGEDQSMTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDC-LP-ISTME 753 (824)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~-~~~~~ 753 (824)
.... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ......... .+ ....+
T Consensus 167 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 167 ADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 4221 123457889999998876 458899999999999999999999997532111 111111100 00 00000
Q ss_pred hccccc--------cCchhhh-hhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHHHH
Q 040845 754 VVDANL--------LSQEDIH-FVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK--LLKIRD 807 (824)
Q Consensus 754 ~~~~~~--------~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~~ 807 (824)
..+... ......+ .......+..+.+++.+||+.||++||+++|++.+ ++.+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 000000 0000000 00011345678899999999999999999999976 666543
No 364
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-35 Score=276.10 Aligned_cols=272 Identities=21% Similarity=0.330 Sum_probs=199.8
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecc--ccchhhhHHHHHHHHhcCCCCcceeEEeeeec--------C
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQ--CGRAFKSFDVECAMMKSIRHRNLVKVISSCSN--------E 595 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 595 (824)
..|+...+||+|.||+||+|+.+ +|+.||+|.+-.+ .........+|+.++..++|+|++.++..|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 45666789999999999999865 4788999875432 22334567889999999999999999988743 3
Q ss_pred CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccc
Q 040845 596 EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 675 (824)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 675 (824)
...|+||++|++ +|...+......++..++.+++.++..||.|+| ...|+|||+||+|+|++.+|.+||+|||+|+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 457999999987 899999887678999999999999999999999 9999999999999999999999999999997
Q ss_pred ccCCCC--CccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcc-hh-hhhhhh----h
Q 040845 676 LLTGED--QSMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEM-TL-KHWVND----C 746 (824)
Q Consensus 676 ~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~-~~-~~~~~~----~ 746 (824)
.+...+ .....+..+.|.+|++||.+.+. .|+.+.|||+-||++.||+||.+-+.+..+... .+ ...... .
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkev 252 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEV 252 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCccc
Confidence 664332 22345667789999999987654 689999999999999999999987765322111 00 011111 1
Q ss_pred CCCc----chhhccccccCchhhh----hhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 747 LPIS----TMEVVDANLLSQEDIH----FVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 747 ~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
+|.- ....+..........+ ...+..-.++..+|+.+++..||.+|+++.+++.+-
T Consensus 253 WP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 253 WPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred CCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence 1110 1111100000000000 001111234678999999999999999999887653
No 365
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1e-32 Score=291.29 Aligned_cols=265 Identities=25% Similarity=0.319 Sum_probs=197.1
Q ss_pred CCCCceeeeccceEEEEEEECC-CcEEEEEEeecccc--chhhhHHHHHHHHhcC---CCCcceeEEeeeecCCe-----
Q 040845 529 FSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQCG--RAFKSFDVECAMMKSI---RHRNLVKVISSCSNEEF----- 597 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 597 (824)
|++.+.||+|+||.||+|+++. ++.||+|+++.... .....+..|+.+++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 5678899999999999999764 89999999874422 2234566787777666 59999999999987766
Q ss_pred eEEEEeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 040845 598 KALVLEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 676 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 676 (824)
.+++|||+. ++|.+++.... ..+++..++.++.|++.|++||| +.+++|+||+|+||++++++.++|+|||.+..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 899999996 48999887644 36899999999999999999999 99999999999999999999999999999977
Q ss_pred cCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhc-
Q 040845 677 LTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVV- 755 (824)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 755 (824)
+..... .....++..|+|||.+.+..++.++|+|||||++|||++|++||..... ......+.............
T Consensus 157 ~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 157 YSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred ccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCCCChHhcCC
Confidence 643221 1233478889999999988899999999999999999999998875322 11222222211100000000
Q ss_pred c----ccccCchhhh--hhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 756 D----ANLLSQEDIH--FVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 756 ~----~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
. .......... .......+..+.+++.+||+.||++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0 0000000000 01112345678899999999999999999999864
No 366
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=3.2e-33 Score=301.31 Aligned_cols=273 Identities=25% Similarity=0.297 Sum_probs=206.5
Q ss_pred cCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCC-----eeE
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEE-----FKA 599 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 599 (824)
+|++.+.||+|++|.||+|+.. +++.||||++.... ....+.+.+|+.+++.++|+||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5788899999999999999875 48999999986543 334567888999999999999999999987765 789
Q ss_pred EEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 600 LVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
+||||++ ++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||.||+++.++.++|+|||.+.....
T Consensus 81 lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred EEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 9999997 58999987655 7899999999999999999999 99999999999999999999999999999987654
Q ss_pred CCCc-cccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCc-------
Q 040845 680 EDQS-MTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIS------- 750 (824)
Q Consensus 680 ~~~~-~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~------- 750 (824)
.... .......++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||......+. ... +.......
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-~~~-i~~~~~~~~~~~~~~ 233 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-LNL-IVEVLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-HHH-HHHhcCCCChhHhhh
Confidence 3211 122334578899999999887 789999999999999999999999976422110 011 11100000
Q ss_pred -----chhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHHHH
Q 040845 751 -----TMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK--LLKIRD 807 (824)
Q Consensus 751 -----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~~ 807 (824)
..+.+..................+..+.+++.+||+.+|++|||+.+++++ ++.+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 000000000000000000112356778999999999999999999999986 555543
No 367
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=8.5e-33 Score=295.05 Aligned_cols=244 Identities=27% Similarity=0.360 Sum_probs=194.1
Q ss_pred CCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc---chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 529 FSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG---RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
|...+.||+|+||+||+|+.. +++.||+|.+..... .....+..|+++++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 556678999999999999864 588999999864422 2345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+. |++.+++......+++.++..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||.+.....
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----- 173 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----- 173 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-----
Confidence 95 5888888766667899999999999999999999 99999999999999999999999999998864321
Q ss_pred ccccccccccccCccCcC---CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 685 TQTQTLATIGYMAPEYGR---EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
.....++..|+|||.+. .+.++.++|||||||++|||++|..||....... ..........+ .
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~~---------~--- 239 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNDSP---------T--- 239 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCC---------C---
Confidence 12345788999999874 4568889999999999999999999986532111 01110000000 0
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....++..+.+++.+||+.+|++||++.+++.+
T Consensus 240 ------~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 240 ------LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011234568899999999999999999999975
No 368
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.3e-33 Score=296.93 Aligned_cols=250 Identities=28% Similarity=0.440 Sum_probs=202.6
Q ss_pred ccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCC-CCcceeEEeeeecCCeeEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIR-HRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 601 (824)
++|.+.+.||+|+||.||+|+.. ++..||+|++.... ....+.+..|++++++++ |+||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888999999999999999865 68999999986531 233466788999999998 99999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
|||+++++|.+++...+ .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 99999999999998765 6899999999999999999999 9999999999999999999999999999988664332
Q ss_pred Cc------------------cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhh
Q 040845 682 QS------------------MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWV 743 (824)
Q Consensus 682 ~~------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~ 743 (824)
.. .......++..|+|||......++.++||||+|++++++++|+.||...... .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~ 235 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY-LTFQKIL 235 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHH
Confidence 11 1222345788999999988888999999999999999999999998753211 0011100
Q ss_pred hhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCH----HHHHHH
Q 040845 744 NDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINA----KEIVAK 801 (824)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~----~evl~~ 801 (824)
. . ....+...+..+.+++.+||+.+|++||++ +|++++
T Consensus 236 ~------------~--------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 236 K------------L--------EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred h------------c--------CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 0 0 000111235568899999999999999999 777654
No 369
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=9.7e-33 Score=298.02 Aligned_cols=270 Identities=21% Similarity=0.235 Sum_probs=197.7
Q ss_pred hccCC-CCceeeeccceEEEEEEEC-CCcEEEEEEeeccccch--------------hhhHHHHHHHHhcCCCCcceeEE
Q 040845 526 TDKFS-ENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRA--------------FKSFDVECAMMKSIRHRNLVKVI 589 (824)
Q Consensus 526 ~~~~~-~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~ 589 (824)
.++|. +.+.||+|+||+||+|..+ +++.||||.++...... ...+.+|+++++.++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 35665 4577999999999999865 58999999986542211 12467899999999999999999
Q ss_pred eeeecCCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEe
Q 040845 590 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLS 669 (824)
Q Consensus 590 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 669 (824)
+++..++..++||||++ |+|.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++++
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEEC
Confidence 99999999999999996 69999987544 6889999999999999999999 9999999999999999999999999
Q ss_pred ecccccccCCCCC------------ccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCc
Q 040845 670 DFGIAKLLTGEDQ------------SMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGE 736 (824)
Q Consensus 670 Dfg~a~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~ 736 (824)
|||.+........ ........++..|+|||.+.+. .++.++||||+||++|||++|+.||......+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999976541110 1111223467889999988764 46899999999999999999999987532211
Q ss_pred chhhhhhhhhCCCc---chhhc-----cccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 737 MTLKHWVNDCLPIS---TMEVV-----DANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 737 ~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.+........... ..... .+........-......++..+.+++.+||+.+|++|||++|++.+
T Consensus 242 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 242 -QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred -HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 1111111000000 00000 0000000000001112346678999999999999999999999874
No 370
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=6.4e-33 Score=296.53 Aligned_cols=271 Identities=23% Similarity=0.290 Sum_probs=197.2
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecC-------
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNE------- 595 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 595 (824)
.++|++.+.||+|+||.||+|.++ +++.||||++..... .....+.+|++++++++|+||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478999999999999999999865 589999999865432 2234677899999999999999999987543
Q ss_pred -CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccc
Q 040845 596 -EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 674 (824)
Q Consensus 596 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 674 (824)
...++|+||+++ ++.+.+......+++.++..++.|+++|++||| +.+++|+||||+||++++++.++|+|||++
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccc
Confidence 346899999964 788877765567999999999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCcc---------ccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhh
Q 040845 675 KLLTGEDQSM---------TQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVN 744 (824)
Q Consensus 675 ~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~ 744 (824)
.......... ..+...++..|+|||.+.+. .++.++|||||||++|||++|++||....... ....+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~-~~~~~~~ 241 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID-QLHLIFK 241 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 8654322211 11234568889999987654 57899999999999999999999986532211 1111111
Q ss_pred hhCC--Ccch-------hhcc-ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 745 DCLP--ISTM-------EVVD-ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 745 ~~~~--~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.... .... ...+ .........-..........+.+++.+|+..||++|||+.|++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 0000 0000 0000 000000000000111234668899999999999999999998864
No 371
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=321.04 Aligned_cols=258 Identities=25% Similarity=0.330 Sum_probs=207.8
Q ss_pred HHHHhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecc---ccchhhhHHHHHHHHhcCCCCcceeEEeeeecCC
Q 040845 521 ELFQATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQ---CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEE 596 (824)
Q Consensus 521 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 596 (824)
++.-..++|++.++||+|+||.|..++++ +++.||+|++.+- ......-|.+|-.+|..-..+=|++++.+|+++.
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 34444688999999999999999999875 4889999998652 2344567889999999989999999999999999
Q ss_pred eeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 040845 597 FKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 676 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 676 (824)
+.|+|||||+||+|-.++.... .+++.-+..++..|+.||.-+| +.|+|||||||+|||+|..|++||+|||.|..
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClk 224 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLK 224 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHh
Confidence 9999999999999999999888 7899999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCccCcC----C-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcc
Q 040845 677 LTGEDQSMTQTQTLATIGYMAPEYGR----E-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIST 751 (824)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~y~aPE~~~----~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 751 (824)
+.. +........+|||-|.+||++. + +.|+..+|.||+||++|||+.|..||+.. .+..-+..+....
T Consensus 225 m~~-dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad-----slveTY~KIm~hk- 297 (1317)
T KOG0612|consen 225 MDA-DGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD-----SLVETYGKIMNHK- 297 (1317)
T ss_pred cCC-CCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH-----HHHHHHHHHhchh-
Confidence 753 3344556678999999999875 3 57999999999999999999999999862 1221111111110
Q ss_pred hhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 040845 752 MEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRIN---AKEIVAK 801 (824)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt---~~evl~~ 801 (824)
....++.....+.++.+||.+.+. +|+.|.. ++++..|
T Consensus 298 -----------~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 298 -----------ESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred -----------hhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 001111112356678888887765 5777776 8888765
No 372
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=7e-33 Score=299.46 Aligned_cols=268 Identities=22% Similarity=0.294 Sum_probs=198.6
Q ss_pred HHHhhccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCC--
Q 040845 522 LFQATDKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEE-- 596 (824)
Q Consensus 522 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 596 (824)
++...++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+..|++++++++||||+++++++..+.
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 344578899999999999999999975 468999999985432 223456778999999999999999999986543
Q ss_pred ----eeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecc
Q 040845 597 ----FKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 672 (824)
Q Consensus 597 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 672 (824)
..++||||+ +++|.+++... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++++|||
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 458999999 77999888643 5889999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCC--
Q 040845 673 IAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPI-- 749 (824)
Q Consensus 673 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-- 749 (824)
++...... .....++..|+|||.+.+ ..++.++|+||+|+++|++++|+.||....... ............
T Consensus 164 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~ 237 (343)
T cd07880 164 LARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEIMKVTGTPSK 237 (343)
T ss_pred cccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCH
Confidence 98764321 123357889999998865 457899999999999999999999987532111 111111100000
Q ss_pred cchhhcccc--------ccCc-hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 750 STMEVVDAN--------LLSQ-EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 750 ~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...+.+... +... ...-......++..+.+++.+|+..||++|||+.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 0000 000001112456678999999999999999999999853
No 373
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=9.9e-33 Score=290.76 Aligned_cols=263 Identities=22% Similarity=0.289 Sum_probs=196.2
Q ss_pred CCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccc-hhhhHHHHHHHHhcCC-CCcceeEEeeeecCCeeEEEEecc
Q 040845 529 FSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGR-AFKSFDVECAMMKSIR-HRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
|++.+.||+|++|+||+|+.. +++.||||++...... ......+|+..+++++ |+|++++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999876 4789999998654322 2233456899999998 999999999999999999999999
Q ss_pred CCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 606 PHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 606 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+|+|.+++.... ..+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||.+........
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 154 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-- 154 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC--
Confidence 789999887654 56899999999999999999999 99999999999999999999999999999986543222
Q ss_pred ccccccccccccCccCcC-CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcc----------hh
Q 040845 685 TQTQTLATIGYMAPEYGR-EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIST----------ME 753 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----------~~ 753 (824)
.....++..|+|||.+. ...++.++|+||||+++|||++|+.||......+. . ........... ..
T Consensus 155 -~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 155 -YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQ-L-YKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred -cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHH-H-HHHHHhcCCCChhhhhhHhhhhc
Confidence 22345788999999875 44578999999999999999999999865322111 0 00000000000 00
Q ss_pred hccccccCc--hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 754 VVDANLLSQ--EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 754 ~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
..+...... ....... ...+..+.+++.+||+.+|++|||++|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLI-PNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccccccccccHHHHc-ccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000000 0000001 1225678999999999999999999999864
No 374
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.1e-32 Score=291.46 Aligned_cols=252 Identities=23% Similarity=0.312 Sum_probs=197.2
Q ss_pred cCCCCceeeeccceEEEEEEE----CCCcEEEEEEeeccc----cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCee
Q 040845 528 KFSENNLIGRGGFGSVYKARI----RDGMEVAVKVFNLQC----GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFK 598 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 598 (824)
+|++.+.||+|+||.||.|+. .+|..||+|+++... ....+.+..|+.+++.+ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999976 368999999987532 12345678899999999 599999999999999999
Q ss_pred EEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 599 ALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
++||||+++++|.+++.... .+++..+..++.|++.|++||| +.+++||||+|+||+++.++.+||+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 99999999999999997654 6888999999999999999999 9999999999999999999999999999997654
Q ss_pred CCCCccccccccccccccCccCcCCC--CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcc
Q 040845 679 GEDQSMTQTQTLATIGYMAPEYGREG--QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVD 756 (824)
Q Consensus 679 ~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (824)
.... .......++..|+|||.+... .++.++||||||+++|+|++|+.||..... ......+.......
T Consensus 157 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~~~~~~------- 227 (290)
T cd05613 157 EDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISRRILKS------- 227 (290)
T ss_pred cccc-cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHHHhhcc-------
Confidence 3221 112234578899999988653 467899999999999999999999864211 11111111111000
Q ss_pred ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 040845 757 ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRI-----NAKEIVAK 801 (824)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 801 (824)
. ...+..++..+.+++.+||..||++|| ++.+++++
T Consensus 228 -----~----~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 228 -----E----PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred -----C----CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 0 001123456788999999999999997 67777665
No 375
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=3e-36 Score=329.18 Aligned_cols=424 Identities=27% Similarity=0.348 Sum_probs=267.4
Q ss_pred cccccccccCCcccccCCCCCcEEEccCCcccccccccccCCCCCCEEeCCCCcCCcccChhhhCcCCCceeeccCCccc
Q 040845 3 SIINNFLTSTTPKEIDNISNLKVLYLYNNRLQGEIIHEIGHLHNLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTNNSLS 82 (824)
Q Consensus 3 ~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 82 (824)
++..|.+-..+-+...+--+|+.|+|++|++. ..|..+..+.+|+.|+++.|.|. ..|.+...+.+|++|+|.+|++.
T Consensus 27 n~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~ 104 (1081)
T KOG0618|consen 27 NLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ 104 (1081)
T ss_pred hccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh
Confidence 44455444433333334444677777777666 55666666667777777777766 55666666667777777777666
Q ss_pred cccCccccCCCCCccEEEccCCeeeeecCccccCCCC-------------------CceEeccCccccccCCccccCCCC
Q 040845 83 GCLSSITDVGLPNLEVLYLWGNNFSGTIPHFIFNASK-------------------LSKLALEMNSFSGFIPSTFGNLRN 143 (824)
Q Consensus 83 ~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~-------------------L~~L~L~~N~i~~~~~~~~~~l~~ 143 (824)
.+|..+.. +.+|+.|++++|++. ..|..+..++. ++.++|..|.+.+.++..+..+..
T Consensus 105 ~lP~~~~~--lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~ 181 (1081)
T KOG0618|consen 105 SLPASISE--LKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH 181 (1081)
T ss_pred cCchhHHh--hhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe
Confidence 66655543 666667777776665 44444433333 334444444444444444444444
Q ss_pred CCEEEccCCcCCCCcCcccccccCCCCCCCcEEECcCCCCCccCC----------------ccccccccccccEEEeecC
Q 040845 144 LEWLTLYDNNLTSSTLDLSFLSSLSNCKSLTHISLSNNPLDGILP----------------RTYVGNLSHSLKNFYMYNC 207 (824)
Q Consensus 144 L~~L~L~~n~i~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~----------------~~~~~~l~~~L~~L~l~~n 207 (824)
.|+|.+|.+..+ .+.++.+|+.|....|++..+.. ..+..-.|.+|+.++++.|
T Consensus 182 --~ldLr~N~~~~~--------dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n 251 (1081)
T KOG0618|consen 182 --QLDLRYNEMEVL--------DLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHN 251 (1081)
T ss_pred --eeecccchhhhh--------hhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchh
Confidence 477777766522 13444444444444444432211 1111223556666666666
Q ss_pred cceecCCccCCCCCCCCEEEecCCccCCccchhhcCCCCCCEEEcccccCcccCCccccccCCccEEEccCccccccCCc
Q 040845 208 NVSGGIPEEITNLTDLTTIVLGGNKLNGSIPITLGKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNKLSGSIPA 287 (824)
Q Consensus 208 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 287 (824)
++++ +|++++.+.+|+.+...+|.+. ..|..+...++|+.|.+.+|++. -+|......++|++|+|..|+|...++.
T Consensus 252 ~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~ 328 (1081)
T KOG0618|consen 252 NLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDN 328 (1081)
T ss_pred hhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchH
Confidence 6663 3366666666666666666664 55666666666666666666666 3455555566666666666666644333
Q ss_pred cccCCCC-CcEEEcCCCCCCCCCCc-ccccccccccccccccccCcCCccccccccchhhhcccccccccCCCccCCCCC
Q 040845 288 CFSNMTF-LKVLSLGSNELTSIPLN-FWSLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKN 365 (824)
Q Consensus 288 ~~~~l~~-L~~L~L~~N~l~~lp~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 365 (824)
.|..+.. |+.|+.+.|++...|.. -...+.|+.|++.+|.++...-..+.++++|+.|+|++|++...+...+.++..
T Consensus 329 ~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~ 408 (1081)
T KOG0618|consen 329 FLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEE 408 (1081)
T ss_pred HHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHH
Confidence 3333332 55555555666555532 123567788888888888777777888888888888888888666666788888
Q ss_pred CCeEEccCccccccCCccccccccccEEEccCcccCCCCcccccCCcccceeeccCCcccCC-CCCCCCccccccccccC
Q 040845 366 LENLFLEYNRLEGSIPDSFGDLISLKSLNLSYNNLSGTIPVSLEKLSYLKDLNLSFNKLKGE-IPRGGSFGNFSAESFKG 444 (824)
Q Consensus 366 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~~~~~~~~~~~ 444 (824)
|++|+||+|+|+ .+|..+..++.|++|...+|+|. ..| .+..++.|+.+|++.|+|+-. +|.....+++..+.+.|
T Consensus 409 LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSG 485 (1081)
T KOG0618|consen 409 LEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSG 485 (1081)
T ss_pred hHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccC
Confidence 888888888888 67888888888888888888887 788 788888888899888888853 34444446778888888
Q ss_pred Ccc
Q 040845 445 NEL 447 (824)
Q Consensus 445 n~~ 447 (824)
|++
T Consensus 486 N~~ 488 (1081)
T KOG0618|consen 486 NTR 488 (1081)
T ss_pred Ccc
Confidence 876
No 376
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=5.5e-33 Score=293.35 Aligned_cols=255 Identities=22% Similarity=0.275 Sum_probs=199.3
Q ss_pred cCCCCceeeeccceEEEEEEEC----CCcEEEEEEeeccc----cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCee
Q 040845 528 KFSENNLIGRGGFGSVYKARIR----DGMEVAVKVFNLQC----GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFK 598 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 598 (824)
+|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+..|+++++++ +|+||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4778899999999999999743 47889999986432 22345678899999999 599999999999999999
Q ss_pred EEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 599 ALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
++||||+++++|.+++.... .+++..+..++.|+++|++||| +.+++||||+|+||+++.++.++++|||++..+.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 99999999999999987654 6889999999999999999999 9999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccCccCcCCCC--CCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcc
Q 040845 679 GEDQSMTQTQTLATIGYMAPEYGREGQ--VSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVD 756 (824)
Q Consensus 679 ~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (824)
..... ......++..|+|||...+.. .+.++||||+|+++|||++|..||..... ......+.......
T Consensus 157 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~------- 227 (288)
T cd05583 157 AEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-QNSQSEISRRILKS------- 227 (288)
T ss_pred ccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-cchHHHHHHHHHcc-------
Confidence 33221 122345788999999887654 78899999999999999999999853211 10111111110000
Q ss_pred ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 757 ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
....+..++..+.+++.+||+.||++|||+.++.+.|+.
T Consensus 228 ---------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 228 ---------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ---------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 001122345678999999999999999998888776654
No 377
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1e-32 Score=298.35 Aligned_cols=273 Identities=22% Similarity=0.279 Sum_probs=201.3
Q ss_pred ccHHHHHHhhccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeee
Q 040845 517 FSYLELFQATDKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCS 593 (824)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 593 (824)
....++..++++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++++++|+||+++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 34456777889999999999999999999975 468999999986432 223456778999999999999999999875
Q ss_pred cC------CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEE
Q 040845 594 NE------EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAH 667 (824)
Q Consensus 594 ~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 667 (824)
.. ...+++++++ +++|.+++... .+++..+..++.|+++|++||| +.+|+||||||+||++++++.+|
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEE
Confidence 43 3467888887 77998888653 5889999999999999999999 99999999999999999999999
Q ss_pred EeecccccccCCCCCccccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhh
Q 040845 668 LSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDC 746 (824)
Q Consensus 668 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 746 (824)
|+|||++...... .....++..|+|||...+ ..++.++||||+||++|||++|+.||...... ..........
T Consensus 161 l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~ 234 (345)
T cd07877 161 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLV 234 (345)
T ss_pred Eeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHh
Confidence 9999998754221 123457889999998765 46788999999999999999999998642211 1111111110
Q ss_pred C--CCcchhhccccc--------cCchhhhh-hhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 747 L--PISTMEVVDANL--------LSQEDIHF-VAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 747 ~--~~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
. +......+.... ........ .....++..+.+++.+|++.||++||++.+++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0 000000000000 00000000 0001245678999999999999999999999877
No 378
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.5e-32 Score=289.33 Aligned_cols=264 Identities=28% Similarity=0.341 Sum_probs=200.0
Q ss_pred CCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 529 FSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
|+..+.||+|++|.||+|+.. +++.||+|++.... ....+.+..|+.+++.++|+|++++++++.+....++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999865 48999999987653 333466788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMT 685 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 685 (824)
+ ++|.+++......+++..+..++.|++.|++||| +.+|+||||+|+||++++++.++|+|||.+........ .
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~ 154 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR--T 154 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--c
Confidence 7 5999999876457899999999999999999999 89999999999999999999999999999986543222 2
Q ss_pred cccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCc----chhhc-----
Q 040845 686 QTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIS----TMEVV----- 755 (824)
Q Consensus 686 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~----- 755 (824)
.....++..|+|||.+.+. .++.++||||+|+++||+++|+.||......+ ...... ...... .....
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID-QLFKIF-QILGTPTEESWPGVTKLPDY 232 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHH-HHhCCCcHHHHHhhcccccc
Confidence 2234467789999988766 78999999999999999999999986532111 000000 000000 00000
Q ss_pred cccccC--chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 756 DANLLS--QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 756 ~~~~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
+..... ...... .-...+..+.+++.+||..||++||++.+++.+
T Consensus 233 ~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 233 KPTFPKFPPKDLEK-VLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccCccchHH-hcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 000000 000000 011235679999999999999999999999864
No 379
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=7.5e-33 Score=299.25 Aligned_cols=267 Identities=22% Similarity=0.300 Sum_probs=196.0
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecC---------
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNE--------- 595 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 595 (824)
..+|.+.+.||+|+||.||+|... +|+.||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 367899999999999999999864 5899999998766555567788999999999999999999776543
Q ss_pred -----CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC-CCCcEEEe
Q 040845 596 -----EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLS 669 (824)
Q Consensus 596 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~ 669 (824)
...++||||++ ++|.+++... .+++..+..++.|++.|++||| +.+|+||||||+||+++ +++.++++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEEC
Confidence 35789999996 5898888643 5789999999999999999999 99999999999999997 45678999
Q ss_pred ecccccccCCCCCc-cccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhC
Q 040845 670 DFGIAKLLTGEDQS-MTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCL 747 (824)
Q Consensus 670 Dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 747 (824)
|||.+......... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||......+. ....... .
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~~~~~-~ 235 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ-MQLILES-V 235 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHh-c
Confidence 99999765322111 11122357889999997654 4678899999999999999999999975322111 1111110 0
Q ss_pred CCcch----hh---ccc-----cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 748 PISTM----EV---VDA-----NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 748 ~~~~~----~~---~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
+.... .. ... ......... ......+.++.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 236 PVVREEDRNELLNVIPSFVRNDGGEPRRPLR-DLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CCCChHHhhhhhhhhhhhhhhcccccCCCHH-HHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00000 00 000 000000000 0011345678899999999999999999999865
No 380
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=4.7e-33 Score=300.99 Aligned_cols=266 Identities=24% Similarity=0.323 Sum_probs=198.7
Q ss_pred HHhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCe--
Q 040845 523 FQATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEF-- 597 (824)
Q Consensus 523 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-- 597 (824)
....++|++.+.||+|++|.||+|+.. +++.||||++.... ....+.+.+|+.+++.++|+|++++++++...+.
T Consensus 11 ~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07851 11 WEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLE 90 (343)
T ss_pred ecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccc
Confidence 345678999999999999999999875 58899999886432 2234567789999999999999999998766554
Q ss_pred ----eEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccc
Q 040845 598 ----KALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 673 (824)
Q Consensus 598 ----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 673 (824)
.++|+||+ +++|.+++... .+++.++..++.|++.|++||| +.+|+||||+|+||++++++.++|+|||+
T Consensus 91 ~~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 91 DFQDVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred ccccEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEccccc
Confidence 89999999 66999998753 5899999999999999999999 99999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcch
Q 040845 674 AKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTM 752 (824)
Q Consensus 674 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 752 (824)
+...... .....++..|+|||...+ ..++.++||||+|+++||+++|+.||......+ ....+... .+....
T Consensus 165 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~~~-~~~~~~ 237 (343)
T cd07851 165 ARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRIMNL-VGTPDE 237 (343)
T ss_pred ccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHh-cCCCCH
Confidence 9865322 223457888999998765 367899999999999999999999986532111 11111110 000000
Q ss_pred hhcccc-----------ccCchhhhh-hhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 EVVDAN-----------LLSQEDIHF-VAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 ~~~~~~-----------~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...... .......+. .....++..+.+++.+||..||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 238 ELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000000 000000000 0111346789999999999999999999999875
No 381
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1e-32 Score=286.71 Aligned_cols=248 Identities=21% Similarity=0.293 Sum_probs=194.4
Q ss_pred cCCCCceeeeccceEEEEEEECC-CcEEEEEEeeccc-----cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 528 KFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQC-----GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
+|.+.+.||+|+||.||+|++.. +..+++|+.+... ......+..|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 57888999999999999998653 4556666654321 12234566799999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhh---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 602 LEYMPHGSLEKYLHS---SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
|||+++++|.+++.. ....+++.+++.++.|++.|++||| +.+++|+|++|+||+++. +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998864 2356899999999999999999999 999999999999999975 569999999987764
Q ss_pred CCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcccc
Q 040845 679 GEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDAN 758 (824)
Q Consensus 679 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (824)
.... ......++..|+|||...+..++.++|+||||+++|+|++|..||..... ..........
T Consensus 157 ~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~--------- 220 (260)
T cd08222 157 GSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF-----LSVVLRIVEG--------- 220 (260)
T ss_pred CCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHHcC---------
Confidence 3322 12234578899999998888889999999999999999999999864211 1111100000
Q ss_pred ccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 759 LLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.....+..++.++.+++.+||..+|++||++.|++++
T Consensus 221 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 221 ------PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred ------CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 0000122456678999999999999999999999875
No 382
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3e-32 Score=293.58 Aligned_cols=268 Identities=22% Similarity=0.245 Sum_probs=193.6
Q ss_pred cCCCCceeeeccceEEEEEEEC-C--CcEEEEEEeeccc--cchhhhHHHHHHHHhcC-CCCcceeEEeeeec----CCe
Q 040845 528 KFSENNLIGRGGFGSVYKARIR-D--GMEVAVKVFNLQC--GRAFKSFDVECAMMKSI-RHRNLVKVISSCSN----EEF 597 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~ 597 (824)
+|++.+.||+|+||.||+|+.. + +..||+|.+.... ....+.+.+|+++++++ .||||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778899999999999999865 3 6789999886432 22345677899999999 59999999987532 346
Q ss_pred eEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 040845 598 KALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 677 (824)
Q Consensus 598 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 677 (824)
.++++||++ ++|.+++.... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+...
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 789999985 68999986544 6899999999999999999999 999999999999999999999999999999866
Q ss_pred CCCCCc--cccccccccccccCccCcCC-CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhC-C-Cc-c
Q 040845 678 TGEDQS--MTQTQTLATIGYMAPEYGRE-GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCL-P-IS-T 751 (824)
Q Consensus 678 ~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~-~~-~ 751 (824)
...... .......|+..|+|||...+ ..++.++|+||+||++|++++|+.||...... ......+.... + .. .
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQVLGTPDEETL 234 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 432221 11223468899999998765 46899999999999999999999998652210 01111111000 0 00 0
Q ss_pred hhhcccc-------ccCchhhhh-hhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 752 MEVVDAN-------LLSQEDIHF-VAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 752 ~~~~~~~-------~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....++. ....+.... .....++..+.+++.+|++.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000 000000000 0011235678999999999999999999999765
No 383
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.6e-32 Score=281.97 Aligned_cols=236 Identities=29% Similarity=0.333 Sum_probs=192.5
Q ss_pred eeeccceEEEEEEEC-CCcEEEEEEeecccc---chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCH
Q 040845 535 IGRGGFGSVYKARIR-DGMEVAVKVFNLQCG---RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSL 610 (824)
Q Consensus 535 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 610 (824)
||+|+||.||++... +++.||+|++..... .....+..|+++++.++|+||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999875 489999999865432 2345788899999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccccccc
Q 040845 611 EKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTL 690 (824)
Q Consensus 611 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 690 (824)
.+++.... .+++..+..++.|+++|+.|+| +.+++|+||+|+||+++.++.++++|||.+....... .......
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTFC 154 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccCCc
Confidence 99998765 6899999999999999999999 9999999999999999999999999999998654322 1223445
Q ss_pred ccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhH
Q 040845 691 ATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAK 770 (824)
Q Consensus 691 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 (824)
++..|+|||...+...+.++|+||||+++||+++|..||..... . ........ .....+
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~---~~~~~~~~----------------~~~~~~ 213 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--K---EIYEKILK----------------DPLRFP 213 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--H---HHHHHHhc----------------CCCCCC
Confidence 78899999999888889999999999999999999999865322 1 11111000 001111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHH
Q 040845 771 EQCVSFVFNLALECTVESPEQRINAKE 797 (824)
Q Consensus 771 ~~~~~~l~~l~~~cl~~dP~~Rpt~~e 797 (824)
...+..+.+++.+||..||++||++.+
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 223566889999999999999999943
No 384
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.98 E-value=2.5e-33 Score=286.93 Aligned_cols=245 Identities=23% Similarity=0.365 Sum_probs=197.5
Q ss_pred CceeeeccceEEEEEEE-CCCcEEEEEEeeccc--cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCC
Q 040845 532 NNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQC--GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHG 608 (824)
Q Consensus 532 ~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 608 (824)
.+.||.|.||+||-|++ ++|+.||||++.+.. .+..+.++.|+.||+.+.||.||.+-..|+..+..+.|||-+ +|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 47899999999999975 469999999986542 334577899999999999999999999999999999999999 55
Q ss_pred CHHHHhh-hCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC---CcEEEeecccccccCCCCCcc
Q 040845 609 SLEKYLH-SSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 609 ~L~~~l~-~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
++.+.+- .....+++.....+..||+.||.||| .++|+|+|+||+|||+.+. -++||||||+|+.+.. ..
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE---ks 721 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE---KS 721 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecch---hh
Confidence 6666654 33457888788888999999999999 9999999999999999643 3799999999998743 23
Q ss_pred ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchh
Q 040845 685 TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQED 764 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (824)
.....+||+.|.|||+++...|...-|+||+||++|--++|..||.+.. ++.+-++. ..++
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE----dIndQIQN---AaFM------------ 782 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE----DINDQIQN---AAFM------------ 782 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc----chhHHhhc---cccc------------
Confidence 4456789999999999999999999999999999999999999987522 22211110 0011
Q ss_pred hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 765 IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 765 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
+....+.+.+..+.++|...+++.-.+|.+....+.+-
T Consensus 783 yPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~ 820 (888)
T KOG4236|consen 783 YPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHP 820 (888)
T ss_pred cCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccch
Confidence 11112335567789999999999999999998877653
No 385
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.98 E-value=5.8e-32 Score=314.41 Aligned_cols=146 Identities=30% Similarity=0.438 Sum_probs=131.7
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 601 (824)
.++|.+.+.||+|+||.||+|.+. +++.||||+++... ......+..|+.+++.++|+||+++++++......++|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 367899999999999999999876 58999999986532 22346788899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccc
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 675 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 675 (824)
|||+++++|.+++...+ .+++..++.++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999997655 6788999999999999999999 8999999999999999999999999999886
No 386
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.2e-33 Score=281.70 Aligned_cols=258 Identities=27% Similarity=0.434 Sum_probs=202.6
Q ss_pred hccCCCCceeeeccceEEEEEE-ECCCcEEEEEEeeccc--c-----chhhhHHHHHHHHhcCCCCcceeEEeeee-cCC
Q 040845 526 TDKFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQC--G-----RAFKSFDVECAMMKSIRHRNLVKVISSCS-NEE 596 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~ 596 (824)
.++|-+..+||+|||+.||+|. ....+.||||+-.... . ...+...+|..|-+.|.||.||++++++. +.+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 4568888999999999999996 4558999999754331 1 12245667999999999999999999996 456
Q ss_pred eeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC---CCCcEEEeeccc
Q 040845 597 FKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD---DNMVAHLSDFGI 673 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~Dfg~ 673 (824)
.++-|.|||+|.+|+=|+..++ .+++.++..|+.||+.||.||.+. +.+|||-|+||.|||+. ..|.+||+|||+
T Consensus 542 sFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 7789999999999999998776 789999999999999999999843 78999999999999994 468999999999
Q ss_pred ccccCCCCCcc-----ccccccccccccCccCcCCC----CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhh
Q 040845 674 AKLLTGEDQSM-----TQTQTLATIGYMAPEYGREG----QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVN 744 (824)
Q Consensus 674 a~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~----~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~ 744 (824)
++.+.+..... -.+...||.||++||.+.-+ ..+.++||||+||++|+++.|+.||....... ++.+
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ-dILq--- 695 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ-DILQ--- 695 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH-HHHh---
Confidence 99987654432 22345799999999976533 57889999999999999999999997632111 1111
Q ss_pred hhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 040845 745 DCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVA 800 (824)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 800 (824)
...++......++.++.++.++.++|++|+++--++|....++..
T Consensus 696 -----------eNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 696 -----------ENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred -----------hhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 011122223344455567788999999999999999998887654
No 387
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.98 E-value=5.1e-33 Score=276.53 Aligned_cols=264 Identities=22% Similarity=0.280 Sum_probs=199.7
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCC-C-C----cceeEEeeeecCCee
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIR-H-R----NLVKVISSCSNEEFK 598 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~l~~~~~~~~~~ 598 (824)
..+|.+...+|+|+||.|..+-+. .+..||||+++.. ....++..-|+++++++. + | -+|.+.++|...++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 688999999999999999999644 4789999998754 455677788999999993 2 3 277888889999999
Q ss_pred EEEEeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC---------------
Q 040845 599 ALVLEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD--------------- 662 (824)
Q Consensus 599 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~--------------- 662 (824)
++|+|.+ |.++.+++.... .+++...+..|++|+++++++|| +.+++|-|+||+||++.+
T Consensus 167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999999 669999998755 67889999999999999999999 999999999999999932
Q ss_pred -----CCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcc
Q 040845 663 -----NMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEM 737 (824)
Q Consensus 663 -----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~ 737 (824)
+..++++|||.|+.-... .+..+.|..|+|||++.+-.++.++||||+|||++|+.||..-|..-...+
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~e~-----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E- 316 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDHEH-----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE- 316 (415)
T ss_pred eccCCCcceEEEecCCcceeccC-----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH-
Confidence 346899999999864322 244568999999999999999999999999999999999999887643211
Q ss_pred hhhhhhhhhCCCcchhhcccc---------ccC----------------chhh--hhhhHHHHHHHHHHHHHHccccCCC
Q 040845 738 TLKHWVNDCLPISTMEVVDAN---------LLS----------------QEDI--HFVAKEQCVSFVFNLALECTVESPE 790 (824)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~---------~~~----------------~~~~--~~~~~~~~~~~l~~l~~~cl~~dP~ 790 (824)
.+ .........-...++... -+. .... -..........+.+|+++|+..||.
T Consensus 317 HL-aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~ 395 (415)
T KOG0671|consen 317 HL-AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPA 395 (415)
T ss_pred HH-HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcc
Confidence 11 011111110011111110 000 0000 0011123455699999999999999
Q ss_pred CCCCHHHHHHH
Q 040845 791 QRINAKEIVAK 801 (824)
Q Consensus 791 ~Rpt~~evl~~ 801 (824)
+|+|+.|++.|
T Consensus 396 ~RiTl~EAL~H 406 (415)
T KOG0671|consen 396 RRITLREALSH 406 (415)
T ss_pred ccccHHHHhcC
Confidence 99999999875
No 388
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.8e-32 Score=291.05 Aligned_cols=243 Identities=24% Similarity=0.285 Sum_probs=196.2
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEEe
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 603 (824)
++.|+....+|.|+|+.|-++... +++..+||++... ..+..+|+.++... +||||+++.+.+.+..+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 567888888999999999999754 5889999998654 23345566666555 79999999999999999999999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee-CCCCcEEEeecccccccCCCCC
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL-DDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill-~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
.+.++-+.+.+..... .. .++..|+.+|+.|+.||| .+||||||+||+|||+ ++.++++|+|||.++...+.
T Consensus 397 ~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-- 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-- 469 (612)
T ss_pred hccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence 9999988877765542 22 678889999999999999 9999999999999999 59999999999999876433
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
....+-|..|.|||++....|++++|+||+|++||+|++|+.||.....+ ..+.. . +..
T Consensus 470 ---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~---~-i~~------------- 528 (612)
T KOG0603|consen 470 ---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHT---R-IQM------------- 528 (612)
T ss_pred ---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHH---h-hcC-------------
Confidence 22345688999999999999999999999999999999999999874443 11111 0 000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
.......+..+.+|+.+|++.||.+||+|.++..+=..
T Consensus 529 ----~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 529 ----PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ----CccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 00014567789999999999999999999999877544
No 389
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=8.2e-33 Score=275.42 Aligned_cols=242 Identities=22% Similarity=0.283 Sum_probs=194.4
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 600 (824)
..+|....+||+|+||.|..|..+ +.+.||||++++.. +...+--..|-.+|.-. +-|.+++++.+|+.-+..|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 457888999999999999999765 36779999987653 23334445566777665 57899999999999999999
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
||||+.||+|--.++..+ .+.+..++.+|.+||-||-+|| +++|++||+|.+||++|.+|++||+|||+++.--
T Consensus 428 VMEyvnGGDLMyhiQQ~G-kFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni-- 501 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVG-KFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI-- 501 (683)
T ss_pred EEEEecCchhhhHHHHhc-ccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccccc--
Confidence 999999999988888776 6778889999999999999999 9999999999999999999999999999997421
Q ss_pred CCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
-...+.....||+.|+|||++....|+.++|.|||||++|||+.|++||++..+.+ +-+- +.+...
T Consensus 502 ~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e--lF~a-----------I~ehnv- 567 (683)
T KOG0696|consen 502 FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE--LFQA-----------IMEHNV- 567 (683)
T ss_pred cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHH-----------HHHccC-
Confidence 12223345679999999999999999999999999999999999999998733221 1111 111111
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCC
Q 040845 761 SQEDIHFVAKEQCVSFVFNLALECTVESPEQRIN 794 (824)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt 794 (824)
..|...+.++.++.+..+...|.+|..
T Consensus 568 -------syPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 568 -------SYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred -------cCcccccHHHHHHHHHHhhcCCccccC
Confidence 112344667888999999999999973
No 390
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.98 E-value=8.9e-32 Score=275.06 Aligned_cols=220 Identities=20% Similarity=0.154 Sum_probs=176.7
Q ss_pred ccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCHHHHhhh
Q 040845 538 GGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSLEKYLHS 616 (824)
Q Consensus 538 G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 616 (824)
|.+|.||+|... +++.||+|++.... .+..|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999864 58999999986542 233455555566799999999999999999999999999999999876
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccccccccccccc
Q 040845 617 SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYM 696 (824)
Q Consensus 617 ~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~ 696 (824)
.. .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.++++|||.+...... .....++..|+
T Consensus 79 ~~-~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~ 149 (237)
T cd05576 79 FL-NIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYC 149 (237)
T ss_pred hc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCcccc
Confidence 54 6899999999999999999999 999999999999999999999999999987654322 12234567899
Q ss_pred CccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHH
Q 040845 697 APEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSF 776 (824)
Q Consensus 697 aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (824)
|||...+..++.++||||+|+++|||++|+.|+........ .. .....+..++..
T Consensus 150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~---------------~~----------~~~~~~~~~~~~ 204 (237)
T cd05576 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN---------------TH----------TTLNIPEWVSEE 204 (237)
T ss_pred CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc---------------cc----------cccCCcccCCHH
Confidence 99999888899999999999999999999988653211000 00 000011234567
Q ss_pred HHHHHHHccccCCCCCCCHH
Q 040845 777 VFNLALECTVESPEQRINAK 796 (824)
Q Consensus 777 l~~l~~~cl~~dP~~Rpt~~ 796 (824)
+.+++.+|++.||++||++.
T Consensus 205 ~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 205 ARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHHHHHccCCHHHhcCCC
Confidence 89999999999999999973
No 391
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-33 Score=264.87 Aligned_cols=251 Identities=27% Similarity=0.284 Sum_probs=190.2
Q ss_pred CCceeeeccceEEEEEEEC-CCcEEEEEEeecccc-chhhhHHHHHHH-HhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 531 ENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCG-RAFKSFDVECAM-MKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 531 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
-...||.|+||+|++-.++ .|+..|||+++.... .+..++..|.+. ++.-++||||+++|++..++..++.||.|+
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd- 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD- 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-
Confidence 3467999999999999765 599999999976643 445566677664 555579999999999999999999999995
Q ss_pred CCHHHHhhh----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 608 GSLEKYLHS----SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 608 g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
-+++.+-.. ....+++.-.-.|....+.||.||.+ ..+|+|||+||+|||++..|.+|+||||++..+. .+
T Consensus 147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv---~S 221 (361)
T KOG1006|consen 147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV---DS 221 (361)
T ss_pred hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHH---HH
Confidence 477655332 12457777788888999999999986 6799999999999999999999999999987653 22
Q ss_pred cccccccccccccCccCcCC--CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 684 MTQTQTLATIGYMAPEYGRE--GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 684 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
...+..+|-..|||||-+.. ..|+.++||||+|+.+||+.||..|+..+..--..+.+.+....| .+.
T Consensus 222 iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp----------~l~ 291 (361)
T KOG1006|consen 222 IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPP----------ILL 291 (361)
T ss_pred HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCC----------eec
Confidence 33455567888999998753 348999999999999999999999987643321122222222111 111
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
... ....++..+.+++.-|+.+|-..||...++.++
T Consensus 292 ~~~----~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 292 FDK----ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred Ccc----cccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 100 001345678999999999999999999998754
No 392
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=5.2e-31 Score=298.37 Aligned_cols=260 Identities=21% Similarity=0.250 Sum_probs=170.5
Q ss_pred hhccCCCCceeeeccceEEEEEEEC-C----CcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEee------ee
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIR-D----GMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISS------CS 593 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~ 593 (824)
..++|++.+.||+|+||.||+|++. + +..||||++..... .+....| .+....+.++..++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4678999999999999999999865 4 68999998753221 1111111 1112222222222221 24
Q ss_pred cCCeeEEEEeccCCCCHHHHhhhCCCCC-------------------CHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCC
Q 040845 594 NEEFKALVLEYMPHGSLEKYLHSSNYSL-------------------DIFQRLNIMIDVASALEYLHFGYSAPVIHCDLK 654 (824)
Q Consensus 594 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~-------------------~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk 654 (824)
.+...++||||+++++|.+++....... ....+..++.|++.||+||| +.+|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence 5667899999999999999987543211 12345679999999999999 9999999999
Q ss_pred CCCeeeCC-CCcEEEeecccccccCCCCCccccccccccccccCccCcCCC----------------------CCCccch
Q 040845 655 PSNVLLDD-NMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG----------------------QVSTNGD 711 (824)
Q Consensus 655 ~~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----------------------~~~~~~D 711 (824)
|+|||++. ++.+||+|||+|+.+..... .......+++.|+|||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~-~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGIN-YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccc-cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999985 68999999999986543222 222345688999999955322 2345679
Q ss_pred HHHHHHHHHHHHhCCCCCcccc--------cCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHH
Q 040845 712 VYSFGIMLMETFTRKKPTDELF--------NGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALE 783 (824)
Q Consensus 712 vwslG~~l~el~tg~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 783 (824)
|||+||++|||+++..|++... ..+.....|.....+ .....................+|+.+
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~d~~~~~~~dLi~~ 432 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEP---------RASPDLRRGFEVLDLDGGAGWELLKS 432 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhcc---------ccchhhhhhhhhccccchHHHHHHHH
Confidence 9999999999999877654311 001112222111111 00000000000000112345689999
Q ss_pred ccccCCCCCCCHHHHHHH
Q 040845 784 CTVESPEQRINAKEIVAK 801 (824)
Q Consensus 784 cl~~dP~~Rpt~~evl~~ 801 (824)
|++.||++|||+.|+++|
T Consensus 433 mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 433 MMRFKGRQRISAKAALAH 450 (566)
T ss_pred HccCCcccCCCHHHHhCC
Confidence 999999999999999986
No 393
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-31 Score=289.80 Aligned_cols=256 Identities=24% Similarity=0.346 Sum_probs=210.2
Q ss_pred HHHhhccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccccchhhhHHHHHHHHhcC-CCCcceeEEeeee-----c
Q 040845 522 LFQATDKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-RHRNLVKVISSCS-----N 594 (824)
Q Consensus 522 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~-----~ 594 (824)
+...++.|++...||.|.+|.||+++. ++|+.+|+|+..... ...++++.|.++++.. .|||++.++|++. .
T Consensus 14 lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~ 92 (953)
T KOG0587|consen 14 LPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGN 92 (953)
T ss_pred CCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCC
Confidence 334467789999999999999999975 468999999887653 3456778899999988 5999999999984 4
Q ss_pred CCeeEEEEeccCCCCHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccc
Q 040845 595 EEFKALVLEYMPHGSLEKYLHSS-NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 673 (824)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 673 (824)
++..++|||||.+|+..|+++.. +..+.|..+..|++.++.|+.+|| ...++|||||-.|||++.++.||++|||.
T Consensus 93 ~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGv 169 (953)
T KOG0587|consen 93 GDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGV 169 (953)
T ss_pred CCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeee
Confidence 67899999999999999998753 367889999999999999999999 99999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccCcC-----CCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCC
Q 040845 674 AKLLTGEDQSMTQTQTLATIGYMAPEYGR-----EGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLP 748 (824)
Q Consensus 674 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 748 (824)
+..++. ........+||+.|||||++. ...|+.++|+||+|++..||..|.+|+.++.+...-+.
T Consensus 170 SaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~-------- 239 (953)
T KOG0587|consen 170 SAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFL-------- 239 (953)
T ss_pred eeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhcc--------
Confidence 987642 222334567999999999875 34578899999999999999999999877543211000
Q ss_pred CcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 749 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
....+...+..+.....++-++|..|+..|-++||++.++++|
T Consensus 240 ----------IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 240 ----------IPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ----------CCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 1223344555566778899999999999999999999998764
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-32 Score=294.05 Aligned_cols=245 Identities=26% Similarity=0.410 Sum_probs=192.8
Q ss_pred CCCCceeeeccceE-EEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEEEEeccC
Q 040845 529 FSENNLIGRGGFGS-VYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKALVLEYMP 606 (824)
Q Consensus 529 ~~~~~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 606 (824)
|...+++|.|+.|+ ||+|... |+.||||++-. +...-+.+|+..++.- +|||||++++.-.++.+.|+..|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 33446789999985 7999987 89999998753 3345667899999887 69999999999999999999999994
Q ss_pred CCCHHHHhhhCCCC---CCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-----CCcEEEeecccccccC
Q 040845 607 HGSLEKYLHSSNYS---LDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-----NMVAHLSDFGIAKLLT 678 (824)
Q Consensus 607 ~g~L~~~l~~~~~~---~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-----~~~~kl~Dfg~a~~~~ 678 (824)
.+|.+++...... ......+.+..|++.|+++|| +.+|||||+||.|||++. ...++|+|||+++.+.
T Consensus 587 -~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 587 -CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred -hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 5999999874211 111445788999999999999 999999999999999975 2578999999999987
Q ss_pred CCCCcc-ccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhC-CCCCcccccCcchhhhhhhhhCCCcchhhcc
Q 040845 679 GEDQSM-TQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTR-KKPTDELFNGEMTLKHWVNDCLPISTMEVVD 756 (824)
Q Consensus 679 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (824)
...... ......||-+|+|||.+....-+.++||||+||++|+.++| .+||++....+..+..-.. +
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~-----------~ 731 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNY-----------T 731 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCcc-----------c
Confidence 655443 34567799999999999998888999999999999999996 8999875544332221100 0
Q ss_pred ccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 757 ANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
-. .+....+| ++.+||.+|++++|..||+|.+|+.|
T Consensus 732 L~-------~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 732 LV-------HLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred ee-------eeccCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 00 00011122 68899999999999999999999865
No 395
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.7e-30 Score=285.92 Aligned_cols=257 Identities=19% Similarity=0.252 Sum_probs=182.2
Q ss_pred hccCCCCceeeeccceEEEEEEE-----------------CCCcEEEEEEeeccccchh--------------hhHHHHH
Q 040845 526 TDKFSENNLIGRGGFGSVYKARI-----------------RDGMEVAVKVFNLQCGRAF--------------KSFDVEC 574 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~~--------------~~~~~E~ 574 (824)
.++|++.++||+|+||+||+|.. .+++.||||.+........ +....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 67899999999999999999964 2357899999865432222 2234477
Q ss_pred HHHhcCCCCcc-----eeEEeeeec--------CCeeEEEEeccCCCCHHHHhhhCC-----------------------
Q 040845 575 AMMKSIRHRNL-----VKVISSCSN--------EEFKALVLEYMPHGSLEKYLHSSN----------------------- 618 (824)
Q Consensus 575 ~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~----------------------- 618 (824)
.++.+++|.++ ++++++|.. ....++||||+++++|.++++...
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77788876654 667777643 356789999999999999987421
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccccccccCc
Q 040845 619 YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 698 (824)
Q Consensus 619 ~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aP 698 (824)
...++..+..++.|+++|++|+| +.+|+||||||+||+++.++.+||+|||++........ .......+++.|+||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSPP 379 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeCh
Confidence 12456788899999999999999 99999999999999999999999999999976532211 111223357899999
Q ss_pred cCcCCCC--------------------C--CccchHHHHHHHHHHHHhCCC-CCcccccC-------cchhhhhhhhhCC
Q 040845 699 EYGREGQ--------------------V--STNGDVYSFGIMLMETFTRKK-PTDELFNG-------EMTLKHWVNDCLP 748 (824)
Q Consensus 699 E~~~~~~--------------------~--~~~~DvwslG~~l~el~tg~~-p~~~~~~~-------~~~~~~~~~~~~~ 748 (824)
|.+.... + ..+.||||+||++|||++|.. |+...... +.....|....
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~-- 457 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYK-- 457 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhc--
Confidence 9875322 1 234799999999999999885 66432111 11111221100
Q ss_pred CcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCC---CCCCCHHHHHHH
Q 040845 749 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESP---EQRINAKEIVAK 801 (824)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP---~~Rpt~~evl~~ 801 (824)
...........++....+++.+|+..+| .+|+|++|+++|
T Consensus 458 -------------~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 458 -------------GQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred -------------ccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 0001111122346678899999999866 689999999876
No 396
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=3.4e-30 Score=264.57 Aligned_cols=238 Identities=31% Similarity=0.383 Sum_probs=193.4
Q ss_pred cceEEEEEEECC-CcEEEEEEeeccccch-hhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCHHHHhhh
Q 040845 539 GFGSVYKARIRD-GMEVAVKVFNLQCGRA-FKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSLEKYLHS 616 (824)
Q Consensus 539 ~~g~V~~~~~~~-~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 616 (824)
+||.||+|.+.. |+.||+|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 589999998764 8999999987654443 67899999999999999999999999999999999999999999999976
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccccccccccccc
Q 040845 617 SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYM 696 (824)
Q Consensus 617 ~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~ 696 (824)
.. .+++..+..++.+++.+++||| +.+++|+||+|+||++++++.++++|||.+....... ......++..|+
T Consensus 81 ~~-~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~ 153 (244)
T smart00220 81 RG-RLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYM 153 (244)
T ss_pred cc-CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCC
Confidence 55 3889999999999999999999 8999999999999999999999999999998764332 223445788999
Q ss_pred CccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHH
Q 040845 697 APEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSF 776 (824)
Q Consensus 697 aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (824)
|||......++.++||||+|+++|++++|..||......+ ...++...... ... .....++..
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~-~~~~~~~~~~~------------~~~----~~~~~~~~~ 216 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL-ELFKKIGKPKP------------PFP----PPEWKISPE 216 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHhccCC------------CCc----cccccCCHH
Confidence 9999988888999999999999999999999986531111 11111110000 000 000014567
Q ss_pred HHHHHHHccccCCCCCCCHHHHHH
Q 040845 777 VFNLALECTVESPEQRINAKEIVA 800 (824)
Q Consensus 777 l~~l~~~cl~~dP~~Rpt~~evl~ 800 (824)
+.+++.+||..+|++||++.++++
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhh
Confidence 899999999999999999999987
No 397
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7e-31 Score=255.00 Aligned_cols=247 Identities=23% Similarity=0.302 Sum_probs=199.7
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccc---cchhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQC---GRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 600 (824)
..+|+..++||+|+|+.|..++++ +.+.||+|+++++. ++...-.+.|-.+..+. +||++|-++.+|+.+...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 467899999999999999999865 57889999987653 34455567787887777 69999999999999999999
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
|.||++||+|-=++++.+ +++++.+..+..+|.-||.||| ++||+.||+|..||++|..|++|++|+|+++.--.
T Consensus 329 vieyv~ggdlmfhmqrqr-klpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l~- 403 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG- 403 (593)
T ss_pred EEEEecCcceeeehhhhh-cCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCCC-
Confidence 999999999977777665 7899999999999999999999 99999999999999999999999999999974322
Q ss_pred CCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCccc--ccCcchhhhhhhhhCCCcchhhcccc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDEL--FNGEMTLKHWVNDCLPISTMEVVDAN 758 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (824)
.....+...||+.|.|||++++..|+..+|.|++||+++||+.|+.||+-. ...++...+|.-..+-+ ..
T Consensus 404 -~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile-------kq 475 (593)
T KOG0695|consen 404 -PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE-------KQ 475 (593)
T ss_pred -CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh-------hc
Confidence 222344578999999999999999999999999999999999999999853 23344444443222111 00
Q ss_pred ccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCC
Q 040845 759 LLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRI 793 (824)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 793 (824)
.+ .|...+.....+++.-+++||.+|.
T Consensus 476 ------ir--iprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 476 ------IR--IPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ------cc--ccceeehhhHHHHHHhhcCCcHHhc
Confidence 01 1223344566788999999999986
No 398
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=1.9e-31 Score=246.15 Aligned_cols=264 Identities=19% Similarity=0.307 Sum_probs=199.5
Q ss_pred hhccCCCCceeeeccceEEEEEE-ECCCcEEEEEEeeccccchhhhHHHHHHHHhcCC-CCcceeEEeeeecC--CeeEE
Q 040845 525 ATDKFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIR-HRNLVKVISSCSNE--EFKAL 600 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~l 600 (824)
..++|++.+.+|+|.|++||.|. ..+.++++||++++. ..+.+.+|+.+++.++ ||||++++++..++ ..+.+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 45789999999999999999996 566899999999753 4567889999999997 99999999998764 57789
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-CCcEEEeecccccccCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~Dfg~a~~~~~ 679 (824)
|+||+++.+....-. .++..++..++.+++.||.|+| ++||+|||+||.|+++|. .-.++++|+|+|.++.+
T Consensus 113 iFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred HhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 999999877766543 5677788999999999999999 999999999999999984 56799999999998865
Q ss_pred CCCccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcc--
Q 040845 680 EDQSMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVD-- 756 (824)
Q Consensus 680 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 756 (824)
.... ...+.+..|--||.+..- .|+..-|+|||||++..|+..+.||-........+..+++...-......+.
T Consensus 186 ~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY 262 (338)
T KOG0668|consen 186 GKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKY 262 (338)
T ss_pred Ccee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHH
Confidence 5433 223456678899988654 5789999999999999999999998654443333333332222111111111
Q ss_pred -----ccccC---chh----hhhh---hHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 757 -----ANLLS---QED----IHFV---AKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 757 -----~~~~~---~~~----~~~~---~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
+.... ... .++. ...-..+++.+++.+.+.+|-.+|+||+|+.+|
T Consensus 263 ~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 263 QIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred ccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 11000 000 0000 011245778999999999999999999999875
No 399
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.8e-32 Score=274.63 Aligned_cols=251 Identities=22% Similarity=0.301 Sum_probs=204.1
Q ss_pred ccCCCCceeeeccceEEEEEEECCCc-EEEEEEeecc---ccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 527 DKFSENNLIGRGGFGSVYKARIRDGM-EVAVKVFNLQ---CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~~~~~-~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
.+++....||-||||.|-.++.+... .+|+|.+++. .+...+.+..|-.+|...+.|.||++|..|.+.+..|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 45566778999999999999876433 4888877543 3455677888999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 682 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 682 (824)
|-|-||.+...++..+ .++..+...++..+.+|++||| .++||+||+||+|.++|.+|-+||.|||+|+.+.....
T Consensus 500 EaClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred HhhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence 9999999999998776 7888899999999999999999 99999999999999999999999999999998754433
Q ss_pred ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCc
Q 040845 683 SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQ 762 (824)
Q Consensus 683 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (824)
+ ...+||+.|.|||++.....+.++|.||+|+++||+++|.+||.+..+.. .+..+.+ ..
T Consensus 576 T---wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk-tYn~ILk----------------Gi 635 (732)
T KOG0614|consen 576 T---WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK-TYNLILK----------------GI 635 (732)
T ss_pred e---eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHh----------------hh
Confidence 2 33679999999999999999999999999999999999999998732211 1111111 00
Q ss_pred hhhhhhhHHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHHHH
Q 040845 763 EDIHFVAKEQCVSFVFNLALECTVESPEQRIN-----AKEIVAKLL 803 (824)
Q Consensus 763 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~L~ 803 (824)
. ....|...+....++|++....+|.+|.. +.|+.+|-+
T Consensus 636 d--~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~W 679 (732)
T KOG0614|consen 636 D--KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRW 679 (732)
T ss_pred h--hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhh
Confidence 0 11122344566788999999999999985 677766643
No 400
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-32 Score=257.12 Aligned_cols=267 Identities=22% Similarity=0.314 Sum_probs=196.2
Q ss_pred CCCceeeeccceEEEEEEE-CCCcEEEEEEeecccc--chhhhHHHHHHHHhcCCCCcceeEEeeeecCC-----eeEEE
Q 040845 530 SENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIRHRNLVKVISSCSNEE-----FKALV 601 (824)
Q Consensus 530 ~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lv 601 (824)
+..+.||-|+||.||.+++ ++|+.||.|++...-. ...+.+.+|++++..++|.|+...+++.+-.. ..|.+
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 4457899999999999975 4699999998754322 34567889999999999999999998875543 45688
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 681 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 681 (824)
+|.| ..+|...+-... .++...+.-+.+||++|+.||| +.+|.||||||.|.++..+..+||||||+|+.... +
T Consensus 136 TELm-QSDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~-d 209 (449)
T KOG0664|consen 136 TELM-QSDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ-R 209 (449)
T ss_pred HHHH-HhhhhheeccCC-CCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccch-h
Confidence 8988 458888876544 7888889999999999999999 99999999999999999999999999999987543 3
Q ss_pred CccccccccccccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 682 QSMTQTQTLATIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 682 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
.....+..+.|..|+|||++++. .|+.++||||.||++.|++..+.-|.... .....+.+.+.......+.+.....
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~--PiqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG--PIEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC--hHHHHHHHHHHhCCCcHHHHHHHhh
Confidence 33445666789999999999876 58999999999999999998887665421 1111112222222111111111110
Q ss_pred Cchh---------------hhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 040845 761 SQED---------------IHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 761 ~~~~---------------~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
+... +....+..-..+...+...++..||.+|.+..+++.+...
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 0000 0111112233456778889999999999999999887654
No 401
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-32 Score=300.07 Aligned_cols=428 Identities=26% Similarity=0.314 Sum_probs=314.0
Q ss_pred cccccccccCCcccccCCCCCcEEEccCCcccccccccccCCCCCCEEeCCCCcCCcccChhhhCcCCCceeeccCCccc
Q 040845 3 SIINNFLTSTTPKEIDNISNLKVLYLYNNRLQGEIIHEIGHLHNLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTNNSLS 82 (824)
Q Consensus 3 ~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 82 (824)
++.+-+++-+ |..+-.-..++.|+++.|-+.......+.+.-.|+.||||+|+++ ..|..+..+.+|+.|+++.|-|.
T Consensus 4 d~s~~~l~~i-p~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~ 81 (1081)
T KOG0618|consen 4 DASDEQLELI-PEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR 81 (1081)
T ss_pred ccccccCccc-chhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh
Confidence 4445555444 444444445999999999888443334445555999999999998 88999999999999999999999
Q ss_pred cccCccccCCCCCccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCC-cCCCCcCc-
Q 040845 83 GCLSSITDVGLPNLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDN-NLTSSTLD- 160 (824)
Q Consensus 83 ~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n-~i~~~~~~- 160 (824)
.++.... .+.+|++|.|.+|.+. ..|..+..+.+|+.|++++|.+. .+|..+..++.++.+..++| +++.++..
T Consensus 82 ~vp~s~~--~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ 157 (1081)
T KOG0618|consen 82 SVPSSCS--NMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTS 157 (1081)
T ss_pred hCchhhh--hhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhcccc
Confidence 9997665 4899999999999998 88999999999999999999999 67878888888888888887 22222110
Q ss_pred ------------ccccccCCCCCCCcEEECcCCCCCccCCcccc----------------ccccccccEEEeecCcceec
Q 040845 161 ------------LSFLSSLSNCKSLTHISLSNNPLDGILPRTYV----------------GNLSHSLKNFYMYNCNVSGG 212 (824)
Q Consensus 161 ------------~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~----------------~~l~~~L~~L~l~~n~l~~~ 212 (824)
..++..+..++. .|+|.+|.+. +...... ...-++++.|+.+.|.++..
T Consensus 158 ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~ 234 (1081)
T KOG0618|consen 158 IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-VLDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTL 234 (1081)
T ss_pred chhhhhhhhhcccchhcchhhhhe--eeecccchhh-hhhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceee
Confidence 012223333444 4888888886 2111111 11113555555555555522
Q ss_pred CCccCCCCCCCCEEEecCCccCCccchhhcCCCCCCEEEcccccCcccCCccccccCCccEEEccCccccccCCccccCC
Q 040845 213 IPEEITNLTDLTTIVLGGNKLNGSIPITLGKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNKLSGSIPACFSNM 292 (824)
Q Consensus 213 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 292 (824)
.+. ..-.+|+.+++++|+++ ..|+++..+.+|+.|+..+|++. .+|..+....+|+.|.+..|.++ -+|...+.+
T Consensus 235 ~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~ 309 (1081)
T KOG0618|consen 235 DVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGL 309 (1081)
T ss_pred ccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCccccc
Confidence 211 11256777777777777 44577777777777777777775 66677777777777777777777 455566677
Q ss_pred CCCcEEEcCCCCCCCCCCcccc-c-ccccccccccccccCcCCccccccccchhhhcccccccccCCCccCCCCCCCeEE
Q 040845 293 TFLKVLSLGSNELTSIPLNFWS-L-KDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLF 370 (824)
Q Consensus 293 ~~L~~L~L~~N~l~~lp~~~~~-l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 370 (824)
+.|++|+|..|+|.++|..+.. + ..|..|+.+.|++....-..=..+..|+.|++.+|.+++..-..+.+.++|+.|+
T Consensus 310 ~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLh 389 (1081)
T KOG0618|consen 310 KSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLH 389 (1081)
T ss_pred ceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeee
Confidence 7888888888888888776543 2 2367777777777643322223467899999999999987667788999999999
Q ss_pred ccCccccccCCccccccccccEEEccCcccCCCCcccccCCcccceeeccCCcccCCCCCCCCccccccccccCCc
Q 040845 371 LEYNRLEGSIPDSFGDLISLKSLNLSYNNLSGTIPVSLEKLSYLKDLNLSFNKLKGEIPRGGSFGNFSAESFKGNE 446 (824)
Q Consensus 371 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 446 (824)
|++|+|.......+.+++.|+.|+||+|+|+ .+|..+..+..|++|...+|++.+-+ ....++++..+.+.-|.
T Consensus 390 LsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~ 463 (1081)
T KOG0618|consen 390 LSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNN 463 (1081)
T ss_pred ecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeech-hhhhcCcceEEecccch
Confidence 9999998544566789999999999999998 99999999999999999999998654 66777777777766664
No 402
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=6.9e-30 Score=267.14 Aligned_cols=205 Identities=22% Similarity=0.331 Sum_probs=174.6
Q ss_pred CCCCceeeeccceEEEEEE-ECCCcEEEEEEeeccc---cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 529 FSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
|...+.||-|+||+|..++ .++...||+|.+++.+ ......++.|..||.....+=||+++..|++++.+|+||||
T Consensus 631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdY 710 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY 710 (1034)
T ss_pred eEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEec
Confidence 6667889999999999996 5557789999887553 33456678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC--
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ-- 682 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 682 (824)
++||++-.++-+.+ -+.+.-+..++.+++.|+++.| +.|+|||||||+|||+|.+|++||+|||+++-+.-...
T Consensus 711 IPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdsk 786 (1034)
T KOG0608|consen 711 IPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 786 (1034)
T ss_pred cCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccceeccccc
Confidence 99999999987766 5777788889999999999999 99999999999999999999999999999975431100
Q ss_pred ------c--------------------------------cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh
Q 040845 683 ------S--------------------------------MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT 724 (824)
Q Consensus 683 ------~--------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t 724 (824)
+ ...-..+||+.|+|||++....|+..+|.||.|||||||+.
T Consensus 787 YYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~ 866 (1034)
T KOG0608|consen 787 YYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLV 866 (1034)
T ss_pred cccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhh
Confidence 0 00012369999999999999999999999999999999999
Q ss_pred CCCCCcccccCcc
Q 040845 725 RKKPTDELFNGEM 737 (824)
Q Consensus 725 g~~p~~~~~~~~~ 737 (824)
|++||.....++.
T Consensus 867 g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 867 GQPPFLADTPGET 879 (1034)
T ss_pred CCCCccCCCCCcc
Confidence 9999987655544
No 403
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-29 Score=230.84 Aligned_cols=212 Identities=28% Similarity=0.356 Sum_probs=168.0
Q ss_pred ccCCCCceeeeccceEEEEEEE-CCCcEEEEEEeeccc-cchhhhHHHHHHH-HhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 527 DKFSENNLIGRGGFGSVYKARI-RDGMEVAVKVFNLQC-GRAFKSFDVECAM-MKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
+.......||+|++|.|-+-++ .+|+..|+|.++... .+..+....|+.+ ++...+|.+|.++|....+...++.||
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 4445566799999999988864 469999999986543 2334455567665 445579999999999999999999999
Q ss_pred ccCCCCHHHHhh---hCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 040845 604 YMPHGSLEKYLH---SSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 604 ~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 680 (824)
.|+. +|+.+-. ..+...++.-.-+|+..+.+|+.|||+ +..++|||+||+|||++.+|++|+||||++..+.+.
T Consensus 126 ~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 126 LMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred Hhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 9954 7776643 234578888889999999999999996 679999999999999999999999999999876433
Q ss_pred CCccccccccccccccCccCcCC----CCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhh
Q 040845 681 DQSMTQTQTLATIGYMAPEYGRE----GQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVN 744 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~ 744 (824)
- ..+...|-..|||||.+.. ..|+.++||||+|+.+.||.+++.||+.++..-..+.+.+.
T Consensus 203 i---Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 203 I---AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred h---HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 2 2233346678999998753 36899999999999999999999999886655444444443
No 404
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-29 Score=245.99 Aligned_cols=263 Identities=23% Similarity=0.292 Sum_probs=198.5
Q ss_pred HhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecc--ccchhhhHHHHHHHHhcCCCCcceeEEeeeecC-----
Q 040845 524 QATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQ--CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNE----- 595 (824)
Q Consensus 524 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 595 (824)
....+|...+.+|.|.- .|..|.+. .+++||+|....+ .....++..+|...+..+.|+||++++.++.-.
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~ 92 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEE 92 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHH
Confidence 34567888889999998 66666432 4899999987443 234456778899999999999999999998543
Q ss_pred -CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccc
Q 040845 596 -EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 674 (824)
Q Consensus 596 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 674 (824)
...|+|||+| ..+|..++.. .++-.++..+..|++.|+.||| +.+|+|||+||+||++..++.+||.|||+|
T Consensus 93 ~~e~y~v~e~m-~~nl~~vi~~---elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 93 FQEVYLVMELM-DANLCQVILM---ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred HHhHHHHHHhh-hhHHHHHHHH---hcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhh
Confidence 4678999999 4599998873 5678889999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCc----
Q 040845 675 KLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIS---- 750 (824)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---- 750 (824)
+... .....+..+.|..|+|||++.+..+.+.+||||.||++.||++|+.-|. ++..+.+|.+..-...
T Consensus 166 r~e~---~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~----g~d~idQ~~ki~~~lgtpd~ 238 (369)
T KOG0665|consen 166 RTED---TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP----GKDHIDQWNKIIEQLGTPDP 238 (369)
T ss_pred cccC---cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec----CchHHHHHHHHHHHhcCCCH
Confidence 8532 2356678889999999999998889999999999999999999998654 4455555543221110
Q ss_pred -chhhcccc----ccCchh-h---------------hhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 751 -TMEVVDAN----LLSQED-I---------------HFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 751 -~~~~~~~~----~~~~~~-~---------------~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
..+-..+. ....+. + ......--...+.+++.+|+..||++|.+++++++|
T Consensus 239 ~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 239 SFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 00000000 000000 0 000001123458899999999999999999999876
No 405
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-28 Score=249.80 Aligned_cols=130 Identities=28% Similarity=0.410 Sum_probs=112.7
Q ss_pred ccCCCCceeeeccceEEEEEE-ECCCcEEEEEEeeccccchhhhHHHHHHHHhcCC-----C---CcceeEEeeee----
Q 040845 527 DKFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIR-----H---RNLVKVISSCS---- 593 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~---- 593 (824)
.+|-+.++||.|.|++||.|- ..+.+.||+|+.+.. ....+....||++|++++ | ..||++++.|.
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 678899999999999999995 456889999998754 445677788999999995 3 36999999984
Q ss_pred cCCeeEEEEeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee
Q 040845 594 NEEFKALVLEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 660 (824)
Q Consensus 594 ~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 660 (824)
...+.++|+|++ |.+|..+|.... ..++...+.+|++||+.||.|||. ..+|||-||||+|||+
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLL 221 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeee
Confidence 457999999999 669999998765 679999999999999999999997 6699999999999998
No 406
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=4.3e-29 Score=259.43 Aligned_cols=198 Identities=22% Similarity=0.362 Sum_probs=171.2
Q ss_pred hccCCCCceeeeccceEEEEEEECC-CcEEEEEEeeccc--------cchhhhHHHHHHHHhcCC---CCcceeEEeeee
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQC--------GRAFKSFDVECAMMKSIR---HRNLVKVISSCS 593 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~ 593 (824)
..+|...+.+|+|+||.|+.|.++. ...|+||.+.++. +...-.+-.|++||..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 4568889999999999999998764 6779999887552 112234556999999997 999999999999
Q ss_pred cCCeeEEEEecc-CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecc
Q 040845 594 NEEFKALVLEYM-PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 672 (824)
Q Consensus 594 ~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 672 (824)
+++.+|++||-. ++-+|.+++..+. .+++.++.-|++||+.|+++|| +.+|||||||-+||.++.+|-+||+|||
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEeecc
Confidence 999999999986 4558999998766 7899999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccCccCcCCCCC-CccchHHHHHHHHHHHHhCCCCCcc
Q 040845 673 IAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQV-STNGDVYSFGIMLMETFTRKKPTDE 731 (824)
Q Consensus 673 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~tg~~p~~~ 731 (824)
.|....... ....+||..|.|||++.+..| +..-|||++|+++|-++...-||+.
T Consensus 716 saa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 716 SAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred chhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 987654332 344679999999999999887 6678999999999999999999864
No 407
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=3e-29 Score=257.17 Aligned_cols=268 Identities=22% Similarity=0.289 Sum_probs=202.9
Q ss_pred HhhccCCCCceeeeccceEEEEEEECC-CcEEEEEEeeccccchhhhHHHHHHHHhcCC------CCcceeEEeeeecCC
Q 040845 524 QATDKFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQCGRAFKSFDVECAMMKSIR------HRNLVKVISSCSNEE 596 (824)
Q Consensus 524 ~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~~~ 596 (824)
....+|.+....|+|-|++|.+|.... |..||||++.... .-.+.=..|+++|++|. .-|.++++..|....
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn 507 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN 507 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc
Confidence 345789999999999999999998654 8899999998653 22344567999999995 347899999999999
Q ss_pred eeEEEEeccCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC-CcEEEeeccc
Q 040845 597 FKALVLEYMPHGSLEKYLHSSN--YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFGI 673 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~Dfg~ 673 (824)
++|+|||-+ .-+|.+++...+ ..+....+..++.|+.-||..|. ..+|+|.||||.|||+.+. ..+||||||.
T Consensus 508 HLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 508 HLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred eeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCcc
Confidence 999999998 459999998776 56788899999999999999999 9999999999999999864 5679999999
Q ss_pred ccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcch---------------
Q 040845 674 AKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMT--------------- 738 (824)
Q Consensus 674 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~--------------- 738 (824)
|.....+. .+.+..+..|.|||++.+-.|+...|+||+||.+||+.||+.-|.+.....+-
T Consensus 584 A~~~~ene----itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Kml 659 (752)
T KOG0670|consen 584 ASFASENE----ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKML 659 (752)
T ss_pred cccccccc----ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHh
Confidence 98764333 34455678899999999999999999999999999999999887664322210
Q ss_pred -hhhhhhhhCCCcc------------------hhhccc------cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCC
Q 040845 739 -LKHWVNDCLPIST------------------MEVVDA------NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRI 793 (824)
Q Consensus 739 -~~~~~~~~~~~~~------------------~~~~~~------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 793 (824)
-.++....+.... +..+.+ .+...+... .........+.+|+.+|+..||++|.
T Consensus 660 RKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~-deq~~~~~~~rdLLdkml~LdP~KRi 738 (752)
T KOG0670|consen 660 RKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLP-DEQPKIVQQLRDLLDKMLILDPEKRI 738 (752)
T ss_pred hhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCC-chhHHHHHHHHHHHHHHhccChhhcC
Confidence 0111111111110 000000 000000000 01124566799999999999999999
Q ss_pred CHHHHHHH
Q 040845 794 NAKEIVAK 801 (824)
Q Consensus 794 t~~evl~~ 801 (824)
|..|+++|
T Consensus 739 t~nqAL~H 746 (752)
T KOG0670|consen 739 TVNQALKH 746 (752)
T ss_pred CHHHHhcC
Confidence 99999875
No 408
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=1.8e-27 Score=238.52 Aligned_cols=211 Identities=36% Similarity=0.569 Sum_probs=184.3
Q ss_pred eeeccceEEEEEEECC-CcEEEEEEeeccccc-hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCHHH
Q 040845 535 IGRGGFGSVYKARIRD-GMEVAVKVFNLQCGR-AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSLEK 612 (824)
Q Consensus 535 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 612 (824)
||+|++|.||++...+ ++.+++|++...... ..+.+.+|++.++.++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999998764 899999998755332 35678999999999999999999999999999999999999899999
Q ss_pred HhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-CCcEEEeecccccccCCCCCccccccccc
Q 040845 613 YLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTGEDQSMTQTQTLA 691 (824)
Q Consensus 613 ~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 691 (824)
++......+++..+..++.++++++++|| +.+++|+||+|.||+++. ++.++|+|||.+........ ......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~ 155 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVG 155 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccC
Confidence 99876446889999999999999999999 899999999999999999 89999999999986643321 1233457
Q ss_pred cccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhH
Q 040845 692 TIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAK 770 (824)
Q Consensus 692 ~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 (824)
...|++||..... .++.++|+|++|++++++
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------ 187 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------ 187 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------
Confidence 7889999998877 789999999999999999
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 040845 771 EQCVSFVFNLALECTVESPEQRINAKEIVAKL 802 (824)
Q Consensus 771 ~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 802 (824)
..+.+++.+|+..+|++||++.++++++
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 2467899999999999999999998753
No 409
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=2.5e-29 Score=265.60 Aligned_cols=253 Identities=27% Similarity=0.427 Sum_probs=208.4
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
.++|+....+|.|.||.||+|+.. +++..|||+++.+.......+++|+-+++.-+|+|||.++|.+-..+..+++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 467889999999999999999854 5899999999999888889999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSM 684 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 684 (824)
+.+|+|++.-+-.+ .+++-++..+.++..+|++||| +.+=+|||||..||++++.|.+|++|||.+..+.. .-.
T Consensus 94 cgggslQdiy~~Tg-plselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqita--ti~ 167 (829)
T KOG0576|consen 94 CGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA--TIA 167 (829)
T ss_pred cCCCcccceeeecc-cchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhh--hhh
Confidence 99999998877655 7888899999999999999999 99999999999999999999999999999876532 223
Q ss_pred ccccccccccccCccCc---CCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccC
Q 040845 685 TQTQTLATIGYMAPEYG---REGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLS 761 (824)
Q Consensus 685 ~~~~~~~~~~y~aPE~~---~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (824)
.....+||+.|||||+. +.+.|...+|||+.|+...|+-.-++|-....+ .+...........
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp--------------mr~l~LmTkS~~q 233 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP--------------MRALFLMTKSGFQ 233 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch--------------HHHHHHhhccCCC
Confidence 44567899999999965 466799999999999999999888877433221 1111111111111
Q ss_pred chhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 040845 762 QEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVA 800 (824)
Q Consensus 762 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 800 (824)
. ..+..+....+.+.++++.|+..+|.+||+++.++.
T Consensus 234 p--p~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 234 P--PTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred C--CcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1 122223345677999999999999999999988765
No 410
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=7.1e-28 Score=243.60 Aligned_cols=271 Identities=23% Similarity=0.319 Sum_probs=200.8
Q ss_pred HHHhhccCCCCceeeeccceEEEEEEEC----CCcEEEEEEeeccccchhhhHHHHHHHHhcC-CCCcceeEEeeeecCC
Q 040845 522 LFQATDKFSENNLIGRGGFGSVYKARIR----DGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-RHRNLVKVISSCSNEE 596 (824)
Q Consensus 522 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 596 (824)
+....+.|...++||+|.|++||+|... .++.||+|.+... .....+..|+++|..+ .+.||+++.+++...+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 3445677999999999999999999743 3678999988654 4456789999999999 5899999999999999
Q ss_pred eeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC-CCCcEEEeeccccc
Q 040845 597 FKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAK 675 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~Dfg~a~ 675 (824)
...+|+||+++....++.. .++..++..+++.+..||+++| ..|||||||||.|++.+ ..+.-.|+|||+|.
T Consensus 109 ~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred eeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHH
Confidence 9999999999999888876 4567889999999999999999 99999999999999997 45778999999997
Q ss_pred ccCCCC------------------C------------------------ccccccccccccccCccCcCC-CCCCccchH
Q 040845 676 LLTGED------------------Q------------------------SMTQTQTLATIGYMAPEYGRE-GQVSTNGDV 712 (824)
Q Consensus 676 ~~~~~~------------------~------------------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv 712 (824)
...... . ........||+||+|||++.. +..+.++||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 321100 0 001123469999999998765 456899999
Q ss_pred HHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcch---------------------------hhcc-ccccCchh
Q 040845 713 YSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTM---------------------------EVVD-ANLLSQED 764 (824)
Q Consensus 713 wslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~-~~~~~~~~ 764 (824)
||.||++.-+++++.||.....+-..+.+.+....+.... +-++ ........
T Consensus 262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 9999999999999999865443333222222111110000 0000 00000000
Q ss_pred --hhhhhH-HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 765 --IHFVAK-EQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 765 --~~~~~~-~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
...... +..+..+++++.+|+..||.+|.||+|+++|
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 011111 2334479999999999999999999999875
No 411
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=2.4e-26 Score=233.00 Aligned_cols=199 Identities=31% Similarity=0.452 Sum_probs=173.5
Q ss_pred CCCCceeeeccceEEEEEEECC-CcEEEEEEeeccccc-hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccC
Q 040845 529 FSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQCGR-AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMP 606 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 606 (824)
|...+.||+|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5667899999999999998765 899999998765444 56788899999999999999999999999999999999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 040845 607 HGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQ 686 (824)
Q Consensus 607 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 686 (824)
+++|.+++......+++..+..++.+++.++++|| +.+++|+|++|.||+++.++.++|+|||.+......... ..
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-~~ 156 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-LL 156 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-cc
Confidence 99999999876533789999999999999999999 899999999999999999999999999999876543211 22
Q ss_pred ccccccccccCccCc-CCCCCCccchHHHHHHHHHHHHhCCCCCcc
Q 040845 687 TQTLATIGYMAPEYG-REGQVSTNGDVYSFGIMLMETFTRKKPTDE 731 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~~l~el~tg~~p~~~ 731 (824)
....++..|++||.. ....++.++|+|+||++++||++|+.||+.
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 334577889999988 666778899999999999999999999966
No 412
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.5e-27 Score=224.59 Aligned_cols=269 Identities=19% Similarity=0.266 Sum_probs=193.7
Q ss_pred hccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeeccccchhhhHHHHHHHHhcC-CCCcceeEEee-eecCCeeEEEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-RHRNLVKVISS-CSNEEFKALVL 602 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~-~~~~~~~~lv~ 602 (824)
.+.|.+.+.+|+|.||.+-.+.++ +.+.+|+|.+..+. ....+|.+|...--.| .|.||+.-+++ |+..+.+++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 467888999999999999999876 47889999886553 3457788888766566 48999988865 67778888999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC--CCCcEEEeecccccccCCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD--DNMVAHLSDFGIAKLLTGE 680 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~--~~~~~kl~Dfg~a~~~~~~ 680 (824)
||++.|+|.+-+...+ +.+.....++.|+++|+.|+| ++.+||||||.+|||+- +...+|+||||..+.....
T Consensus 102 E~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t 176 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT 176 (378)
T ss_pred ccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccCce
Confidence 9999999999987654 677788899999999999999 99999999999999983 4458999999998753211
Q ss_pred CCccccccccccccccCccCcC---CC--CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhc
Q 040845 681 DQSMTQTQTLATIGYMAPEYGR---EG--QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVV 755 (824)
Q Consensus 681 ~~~~~~~~~~~~~~y~aPE~~~---~~--~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (824)
. .....+..|.|||... .+ ...+.+|+|.||+++|.++||+.||......+..+..|..-...... .
T Consensus 177 ---V--~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~-~-- 248 (378)
T KOG1345|consen 177 ---V--KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP-A-- 248 (378)
T ss_pred ---e--hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc-c--
Confidence 1 1112455799999653 22 34678999999999999999999998654444444444332111100 0
Q ss_pred cccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH-HHhhccccCCcee
Q 040845 756 DANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKI-RDSLLRNVGGRCI 818 (824)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~-~~~~~~~~~~~~~ 818 (824)
-+... ...++.+.++.++-+..+|++|=...++.+..... .++......+.+.
T Consensus 249 ~P~~F----------~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~~i~t~k~~ee 302 (378)
T KOG1345|consen 249 LPKKF----------NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEKLIKTVKRPEE 302 (378)
T ss_pred Cchhh----------cccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHhhhccccChhh
Confidence 00000 12456688899999999999995444444443332 2444444444433
No 413
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=6.2e-29 Score=247.55 Aligned_cols=391 Identities=23% Similarity=0.235 Sum_probs=255.3
Q ss_pred CCcEEEccCCcccccccccccCCCCCCEEeCCCCcCCcccChhhhCcCCCceeeccC-CccccccCccccCCCCCccEEE
Q 040845 22 NLKVLYLYNNRLQGEIIHEIGHLHNLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTN-NSLSGCLSSITDVGLPNLEVLY 100 (824)
Q Consensus 22 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~~l~~L~~L~ 100 (824)
.-.+++|..|.|+.+.+.+|+.+++|+.||||+|.|+.+-|++|.++.+|.+|-+-+ |+|+.++...+ .+|.+|+.|.
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F-~gL~slqrLl 146 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAF-GGLSSLQRLL 146 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHh-hhHHHHHHHh
Confidence 345677777777766667777777777777777777777777777777766665554 67776666544 3677777777
Q ss_pred ccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCC-cCcc------cccccCCCCCCC
Q 040845 101 LWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSS-TLDL------SFLSSLSNCKSL 173 (824)
Q Consensus 101 L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~------~~~~~l~~l~~L 173 (824)
+.-|++.-+..+.|..+++|..|.+-+|.+..+--.+|..+..++.+.+..|.+... .... ..+..++.....
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 777777766666777777777777777777744444777777777777777762211 0000 001223444555
Q ss_pred cEEECcCCCCCccCCccccccccccccEEEeecCcceecCC-ccCCCCCCCCEEEecCCccCCccchhhcCCCCCCEEEc
Q 040845 174 THISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIP-EEITNLTDLTTIVLGGNKLNGSIPITLGKLQKLQDVDL 252 (824)
Q Consensus 174 ~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 252 (824)
.-..+.++++..+.+..|... ..++..=....+...+..| ..|..+++|+.|+|++|+|+.+.+.+|.++..+++|.|
T Consensus 227 ~p~rl~~~Ri~q~~a~kf~c~-~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L 305 (498)
T KOG4237|consen 227 SPYRLYYKRINQEDARKFLCS-LESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYL 305 (498)
T ss_pred chHHHHHHHhcccchhhhhhh-HHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhc
Confidence 556666777776666666442 1122111222333333333 35788899999999999998888889999999999999
Q ss_pred ccccCcccCCccccccCCccEEEccCccccccCCccccCCCCCcEEEcCCCCCC---C---------------CCCcccc
Q 040845 253 EYNQLEGSIPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKVLSLGSNELT---S---------------IPLNFWS 314 (824)
Q Consensus 253 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~---~---------------lp~~~~~ 314 (824)
..|+|.......|..+..|+.|+|++|+|+...|.+|..+.+|.+|+|-.|.+. . .|. =..
T Consensus 306 ~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~-Cq~ 384 (498)
T KOG4237|consen 306 TRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPR-CQS 384 (498)
T ss_pred CcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCC-CCC
Confidence 999988777778888888999999999998888888988888999988887543 0 010 011
Q ss_pred cccccccccccccccC---cCCccc---------cccccchh-hhcccccccccCCCccCCCCCCCeEEccCccccccCC
Q 040845 315 LKDILDLNLSSNCFSG---PLPLEI---------RNLKALIE-IDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEGSIP 381 (824)
Q Consensus 315 l~~L~~L~l~~N~l~~---~~~~~~---------~~l~~L~~-L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 381 (824)
...++.+.++++.+.. ..|++. ..++-+.+ ...|+..++ .+|..+. ..-.+|++.+|.++ .+|
T Consensus 385 p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~-~vp 460 (498)
T KOG4237|consen 385 PGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVP 460 (498)
T ss_pred CchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc-ccC
Confidence 2345556666554432 122221 22333433 334444444 4454333 34577888899888 566
Q ss_pred ccccccccccEEEccCcccCCCCcccccCCcccceeeccCC
Q 040845 382 DSFGDLISLKSLNLSYNNLSGTIPVSLEKLSYLKDLNLSFN 422 (824)
Q Consensus 382 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 422 (824)
.. .+.+| .+|+++|+++..--..|.++.+|.+|-+++|
T Consensus 461 ~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 461 DE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred HH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 65 56677 8899999988555667888888888888876
No 414
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.9e-27 Score=221.75 Aligned_cols=249 Identities=23% Similarity=0.372 Sum_probs=197.0
Q ss_pred CCCceeeeccceEEEEEEECCCcEEEEEEeecc--ccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCC
Q 040845 530 SENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQ--CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 530 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
....+|.+...|+.|+|+|+ |..+++|++... .....++|.+|.-.++-+.||||..++|+|..+....++..||+.
T Consensus 193 nl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~ 271 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF 271 (448)
T ss_pred hhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence 34457889999999999998 777888877544 234457899999999999999999999999999999999999999
Q ss_pred CCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcccc
Q 040845 608 GSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQ 686 (824)
Q Consensus 608 g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 686 (824)
|+|..++++.. .-.+..++++++.++|+|++|||+ .+.-|.---+.+..|++|++.+++|+-=. + ......
T Consensus 272 gslynvlhe~t~vvvd~sqav~faldiargmaflhs-lep~ipr~~lns~hvmidedltarismad-~------kfsfqe 343 (448)
T KOG0195|consen 272 GSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHS-LEPMIPRFYLNSKHVMIDEDLTARISMAD-T------KFSFQE 343 (448)
T ss_pred hHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhh-cchhhhhhhcccceEEecchhhhheeccc-c------eeeeec
Confidence 99999999765 456778999999999999999994 24445556789999999999988876211 1 111122
Q ss_pred ccccccccccCccCcCCCC---CCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCch
Q 040845 687 TQTLATIGYMAPEYGREGQ---VSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQE 763 (824)
Q Consensus 687 ~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (824)
.+..-.+.||+||.+.... .-.++|+|||++++||+.|...||.+..+.+..+. ...+
T Consensus 344 ~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk-------------------iale 404 (448)
T KOG0195|consen 344 VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK-------------------IALE 404 (448)
T ss_pred cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh-------------------hhhc
Confidence 2334568899999987654 34678999999999999999999988655433222 1223
Q ss_pred hhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 764 DIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 764 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
+.+...|+..+..+.++|.-|++.||.+||.+..++-.|+++.
T Consensus 405 glrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 405 GLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred cccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 3444556667788999999999999999999999999998874
No 415
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=5.2e-25 Score=213.90 Aligned_cols=170 Identities=22% Similarity=0.218 Sum_probs=131.3
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|+|.+++...+..+++.+++.++.|++.||+||| +.+ ||+||+++.++.+|+ ||.+.......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------ 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ------ 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc------
Confidence 6899999876667999999999999999999999 666 999999999999999 99988653321
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
..||+.|+|||++.+..++.++|||||||++|||+||+.||............+.....+... ...
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 129 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDP-------------RDR 129 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCc-------------ccc
Confidence 257899999999999999999999999999999999999986543322222222221111100 000
Q ss_pred hhHHHHHH--HHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 040845 768 VAKEQCVS--FVFNLALECTVESPEQRINAKEIVAKLLKIRDS 808 (824)
Q Consensus 768 ~~~~~~~~--~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 808 (824)
..+..... .+.+++.+||..+|++||++.|+++++......
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 01112223 689999999999999999999999999887543
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=3.6e-24 Score=263.41 Aligned_cols=305 Identities=21% Similarity=0.245 Sum_probs=145.9
Q ss_pred CCceeeccCCccccccCccccCCCCCccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEc
Q 040845 70 TLKAFAVTNNSLSGCLSSITDVGLPNLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTL 149 (824)
Q Consensus 70 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 149 (824)
+|+.|++.++.++.+|..+. +.+|++|++++|++. .++..+..+++|+.|+|++|.....+| .++.+++|+.|+|
T Consensus 590 ~Lr~L~~~~~~l~~lP~~f~---~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L 664 (1153)
T PLN03210 590 KLRLLRWDKYPLRCMPSNFR---PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKL 664 (1153)
T ss_pred ccEEEEecCCCCCCCCCcCC---ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEe
Confidence 34445554444444444321 344455555555444 334444444555555554443222333 2444455555555
Q ss_pred cCCc-CCCCcCcccccccCCCCCCCcEEECcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEe
Q 040845 150 YDNN-LTSSTLDLSFLSSLSNCKSLTHISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVL 228 (824)
Q Consensus 150 ~~n~-i~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 228 (824)
++|. +..++ ..+.++++|+.|++++|......|... -..+|+.|++++|...+.+|.. .++|+.|+|
T Consensus 665 ~~c~~L~~lp------~si~~L~~L~~L~L~~c~~L~~Lp~~i---~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L 732 (1153)
T PLN03210 665 SDCSSLVELP------SSIQYLNKLEDLDMSRCENLEILPTGI---NLKSLYRLNLSGCSRLKSFPDI---STNISWLDL 732 (1153)
T ss_pred cCCCCccccc------hhhhccCCCCEEeCCCCCCcCccCCcC---CCCCCCEEeCCCCCCccccccc---cCCcCeeec
Confidence 4432 22221 234444555555555433211111111 1234444444444333333322 245556666
Q ss_pred cCCccCCccchhhcCCCCCCEEEcccccCc-------ccCCccccccCCccEEEccCccccccCCccccCCCCCcEEEcC
Q 040845 229 GGNKLNGSIPITLGKLQKLQDVDLEYNQLE-------GSIPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKVLSLG 301 (824)
Q Consensus 229 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-------~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 301 (824)
++|.+. .+|..+ .+++|++|++.++... ...+..+...++|+.|++++|.....+|..++++++|+.|+++
T Consensus 733 ~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls 810 (1153)
T PLN03210 733 DETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIE 810 (1153)
T ss_pred CCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECC
Confidence 666655 334333 3555666655543221 1111122234566667777666555666666777777777776
Q ss_pred CC-CCCCCCCcccccccccccccccccccCcCCccccccccchhhhcccccccccCCCccCCCCCCCeEEccC-cccccc
Q 040845 302 SN-ELTSIPLNFWSLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEY-NRLEGS 379 (824)
Q Consensus 302 ~N-~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~ 379 (824)
+| .++.+|... .+++|+.|++++|......|.. ..+|+.|+|++|.++ .+|..+..+++|+.|+|++ |+++ .
T Consensus 811 ~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~ 884 (1153)
T PLN03210 811 NCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-R 884 (1153)
T ss_pred CCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-c
Confidence 65 456666544 4566666666665433233322 234555566666655 3455555566666666655 3444 3
Q ss_pred CCccccccccccEEEccCcc
Q 040845 380 IPDSFGDLISLKSLNLSYNN 399 (824)
Q Consensus 380 ~~~~~~~l~~L~~L~L~~N~ 399 (824)
+|..+..+++|+.|++++|.
T Consensus 885 l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 885 VSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cCcccccccCCCeeecCCCc
Confidence 45455555566666665553
No 417
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=1.7e-25 Score=267.43 Aligned_cols=197 Identities=18% Similarity=0.267 Sum_probs=140.8
Q ss_pred cCCC-CcceeEEeee-------ecCCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 040845 579 SIRH-RNLVKVISSC-------SNEEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIH 650 (824)
Q Consensus 579 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 650 (824)
.++| +||++++++| .....++.++||+ +++|.+++......+++.+++.++.||++||+||| +++|+|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~gIvH 103 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAH---SQGIVV 103 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHH---hCCeee
Confidence 4566 6888888877 2334667889988 56999999865567999999999999999999999 999999
Q ss_pred cCCCCCCeeeCCCC-------------------cEEEeecccccccCCCCC--------------ccccccccccccccC
Q 040845 651 CDLKPSNVLLDDNM-------------------VAHLSDFGIAKLLTGEDQ--------------SMTQTQTLATIGYMA 697 (824)
Q Consensus 651 ~Dlk~~Nill~~~~-------------------~~kl~Dfg~a~~~~~~~~--------------~~~~~~~~~~~~y~a 697 (824)
|||||+|||++..+ .+|++|||+++....... ........||++|||
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 99999999996544 455566665543211000 000112357889999
Q ss_pred ccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHH
Q 040845 698 PEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 777 (824)
Q Consensus 698 PE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 777 (824)
||++.+..++.++|||||||++|||++|..|+..... ....+.....+ +. ........
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~~~~~--------~~-----------~~~~~~~~ 241 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRHRVLP--------PQ-----------ILLNWPKE 241 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHHhhcC--------hh-----------hhhcCHHH
Confidence 9999999999999999999999999998887653111 11111110000 00 00112335
Q ss_pred HHHHHHccccCCCCCCCHHHHHHH
Q 040845 778 FNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 778 ~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.+++.+||+.+|.+||++.|++++
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhhc
Confidence 678899999999999999999875
No 418
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1e-23 Score=259.36 Aligned_cols=339 Identities=21% Similarity=0.212 Sum_probs=234.2
Q ss_pred ccChhhhCcCCCceeeccCCccc-------cccCccccCCCCCccEEEccCCeeeeecCccccCCCCCceEeccCccccc
Q 040845 60 TIPAAIFNVSTLKAFAVTNNSLS-------GCLSSITDVGLPNLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSG 132 (824)
Q Consensus 60 ~~~~~~~~l~~L~~L~L~~n~l~-------~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~ 132 (824)
..+.+|.++.+|+.|.+..+... .++.... .-.++|+.|++.+|.++ .+|..+ .+.+|+.|+|.+|++.
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~-~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~- 624 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFD-YLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE- 624 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchh-hcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-
Confidence 34566777888888877655321 1222221 11357999999999997 667766 5799999999999998
Q ss_pred cCCccccCCCCCCEEEccCCc-CCCCcCcccccccCCCCCCCcEEECcCCCCCccCCccccccccccccEEEeecCccee
Q 040845 133 FIPSTFGNLRNLEWLTLYDNN-LTSSTLDLSFLSSLSNCKSLTHISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSG 211 (824)
Q Consensus 133 ~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~ 211 (824)
.++..+..+++|+.|+|+++. +..++ .++.+++|++|+|++|......|..+. . ..+|+.|++++|...+
T Consensus 625 ~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-------~ls~l~~Le~L~L~~c~~L~~lp~si~-~-L~~L~~L~L~~c~~L~ 695 (1153)
T PLN03210 625 KLWDGVHSLTGLRNIDLRGSKNLKEIP-------DLSMATNLETLKLSDCSSLVELPSSIQ-Y-LNKLEDLDMSRCENLE 695 (1153)
T ss_pred ccccccccCCCCCEEECCCCCCcCcCC-------ccccCCcccEEEecCCCCccccchhhh-c-cCCCCEEeCCCCCCcC
Confidence 567888999999999999875 44443 377889999999999875444444432 2 3578888888876666
Q ss_pred cCCccCCCCCCCCEEEecCCccCCccchhhcCCCCCCEEEcccccCcccCCccccccCCccEEEccCcccc-------cc
Q 040845 212 GIPEEITNLTDLTTIVLGGNKLNGSIPITLGKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNKLS-------GS 284 (824)
Q Consensus 212 ~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~-------~~ 284 (824)
.+|..+ ++++|+.|++++|......|.. .++|++|++++|.+. .+|..+ .+++|+.|.+.++... ..
T Consensus 696 ~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l 769 (1153)
T PLN03210 696 ILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPL 769 (1153)
T ss_pred ccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhcccccccc
Confidence 666655 6788888888887655445532 357788888888876 455544 4677777777764422 11
Q ss_pred CCccccCCCCCcEEEcCCCC-CCCCCCcccccccccccccccccccCcCCccccccccchhhhcccccccccCCCccCCC
Q 040845 285 IPACFSNMTFLKVLSLGSNE-LTSIPLNFWSLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSL 363 (824)
Q Consensus 285 ~~~~~~~l~~L~~L~L~~N~-l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 363 (824)
.+..+...++|+.|+|++|. +..+|..+..+++|+.|++++|...+.+|..+ ++++|+.|+|++|.....+|.. .
T Consensus 770 ~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~ 845 (1153)
T PLN03210 770 TPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---S 845 (1153)
T ss_pred chhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---c
Confidence 12222334677888888774 55677777778888888887765444566555 6777888888877654444432 3
Q ss_pred CCCCeEEccCccccccCCccccccccccEEEccCc-ccCCCCcccccCCcccceeeccCCc
Q 040845 364 KNLENLFLEYNRLEGSIPDSFGDLISLKSLNLSYN-NLSGTIPVSLEKLSYLKDLNLSFNK 423 (824)
Q Consensus 364 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~N~ 423 (824)
.+|+.|+|++|.++ .+|.++..+++|+.|+|++| .++ .+|..+..+++|+.++++++.
T Consensus 846 ~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 846 TNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 56778888888887 56777777888888888774 444 677777777777777777763
No 419
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.91 E-value=3e-24 Score=244.30 Aligned_cols=224 Identities=25% Similarity=0.392 Sum_probs=135.6
Q ss_pred CCccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCCcCcccccccCCCCCCC
Q 040845 94 PNLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSSTLDLSFLSSLSNCKSL 173 (824)
Q Consensus 94 ~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~~L 173 (824)
++|++|+|++|+|+ .+|.. .++|+.|+|++|.++. +|.. .++|+.|++++|+++.++. ..++|
T Consensus 242 ~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~~-Lp~l---p~~L~~L~Ls~N~Lt~LP~---------~p~~L 304 (788)
T PRK15387 242 PELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLTH-LPAL---PSGLCKLWIFGNQLTSLPV---------LPPGL 304 (788)
T ss_pred CCCcEEEecCCccC-cccCc---ccccceeeccCCchhh-hhhc---hhhcCEEECcCCccccccc---------ccccc
Confidence 34444444444444 22221 2344455555554442 2221 1344455555555544431 12445
Q ss_pred cEEECcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEecCCccCCccchhhcCCCCCCEEEcc
Q 040845 174 THISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNKLNGSIPITLGKLQKLQDVDLE 253 (824)
Q Consensus 174 ~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 253 (824)
++|+|++|++.+++. ++.+|+.|++.+|++++ +|.. ..+|+.|+|++|+|+. +|.. .++|+.|+++
T Consensus 305 ~~LdLS~N~L~~Lp~------lp~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls 370 (788)
T PRK15387 305 QELSVSDNQLASLPA------LPSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAY 370 (788)
T ss_pred ceeECCCCccccCCC------CcccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhh
Confidence 555555555554321 23345555555555543 2321 1467777777777774 3432 2467777888
Q ss_pred cccCcccCCccccccCCccEEEccCccccccCCccccCCCCCcEEEcCCCCCCCCCCcccccccccccccccccccCcCC
Q 040845 254 YNQLEGSIPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKVLSLGSNELTSIPLNFWSLKDILDLNLSSNCFSGPLP 333 (824)
Q Consensus 254 ~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~ 333 (824)
+|+|+. +|.. ..+|+.|++++|++++ +|.. .++|+.|++++|+|+.+|.. ..+|+.|++++|+++ .+|
T Consensus 371 ~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~LssIP~l---~~~L~~L~Ls~NqLt-~LP 438 (788)
T PRK15387 371 NNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTSLPML---PSGLLSLSVYRNQLT-RLP 438 (788)
T ss_pred cccccc-Cccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCCCCcc---hhhhhhhhhccCccc-ccC
Confidence 888773 4543 3468888888888874 4432 35788999999999988854 356788999999998 678
Q ss_pred ccccccccchhhhcccccccccCCCcc
Q 040845 334 LEIRNLKALIEIDFSMNNFSGIIPMEI 360 (824)
Q Consensus 334 ~~~~~l~~L~~L~l~~N~l~~~~~~~~ 360 (824)
..+.++++|+.|+|++|++++..+..+
T Consensus 439 ~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 439 ESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred hHHhhccCCCeEECCCCCCCchHHHHH
Confidence 889999999999999999997766555
No 420
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.91 E-value=3.8e-24 Score=243.47 Aligned_cols=267 Identities=22% Similarity=0.326 Sum_probs=207.6
Q ss_pred CCCceeeccCCccccccCccccCCCCCccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEE
Q 040845 69 STLKAFAVTNNSLSGCLSSITDVGLPNLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLT 148 (824)
Q Consensus 69 ~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 148 (824)
..-..|+|++|.|+.+|..+. ++|+.|++++|+++ .+|.. +++|++|+|++|+|+. +|.. .++|+.|+
T Consensus 201 ~~~~~LdLs~~~LtsLP~~l~----~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~ 268 (788)
T PRK15387 201 NGNAVLNVGESGLTTLPDCLP----AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELS 268 (788)
T ss_pred CCCcEEEcCCCCCCcCCcchh----cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCc-ccCc---ccccceee
Confidence 345567777777776665443 47888888888887 45542 5889999999999995 4532 46899999
Q ss_pred ccCCcCCCCcCcccccccCCCCCCCcEEECcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEe
Q 040845 149 LYDNNLTSSTLDLSFLSSLSNCKSLTHISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVL 228 (824)
Q Consensus 149 L~~n~i~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 228 (824)
+++|.++.++. ..++|+.|++++|++..++. .+++|+.|++++|++++. |.. ..+|+.|++
T Consensus 269 Ls~N~L~~Lp~---------lp~~L~~L~Ls~N~Lt~LP~------~p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~L 329 (788)
T PRK15387 269 IFSNPLTHLPA---------LPSGLCKLWIFGNQLTSLPV------LPPGLQELSVSDNQLASL-PAL---PSELCKLWA 329 (788)
T ss_pred ccCCchhhhhh---------chhhcCEEECcCCccccccc------cccccceeECCCCccccC-CCC---ccccccccc
Confidence 99999987653 12678899999999987643 256899999999999863 432 246888999
Q ss_pred cCCccCCccchhhcCCCCCCEEEcccccCcccCCccccccCCccEEEccCccccccCCccccCCCCCcEEEcCCCCCCCC
Q 040845 229 GGNKLNGSIPITLGKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKVLSLGSNELTSI 308 (824)
Q Consensus 229 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 308 (824)
++|++++ +|.. ..+|++|+|++|+|+. +|.. ..+|+.|++++|+|.. +|.. ..+|+.|++++|+|+.+
T Consensus 330 s~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~L 397 (788)
T PRK15387 330 YNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTSL 397 (788)
T ss_pred ccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccCC
Confidence 9999984 4532 2589999999999994 5543 3578899999999985 4543 35799999999999999
Q ss_pred CCcccccccccccccccccccCcCCccccccccchhhhcccccccccCCCccCCCCCCCeEEccCccccccCCccccc
Q 040845 309 PLNFWSLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEGSIPDSFGD 386 (824)
Q Consensus 309 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 386 (824)
|.. .++|+.|++++|+++. +|.. ..+|+.|++++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..
T Consensus 398 P~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 398 PVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred CCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 864 3679999999999985 5643 357889999999998 67888999999999999999999877766533
No 421
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=2.4e-23 Score=194.40 Aligned_cols=264 Identities=19% Similarity=0.206 Sum_probs=202.2
Q ss_pred hhccCCCCceeeeccceEEEEEE-ECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCC-CcceeEEeeeecCCeeEEEE
Q 040845 525 ATDKFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRH-RNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 602 (824)
...+|.+.+.||.|+||.+|.|. ..+|..||||+-+... ....+..|..+++.+++ ..|..+..+..+...-.+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 45789999999999999999996 6679999999876443 23567789999999975 67888888889999999999
Q ss_pred eccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC---CCCcEEEeecccccccCC
Q 040845 603 EYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 603 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~Dfg~a~~~~~ 679 (824)
|.+ |.+|++...-....++..+++-.+-|++.-++|+| .++++||||||+|+|+. ....+.++|||+|+.+.+
T Consensus 91 dLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred ecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 999 77999999877778999999999999999999999 99999999999999996 345789999999998865
Q ss_pred CCCc-----cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhh
Q 040845 680 EDQS-----MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEV 754 (824)
Q Consensus 680 ~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (824)
.... .......||.+|.+-..+.+...+.+.|+-|+|.++.+.-.|..||.+...... ..++- .
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk-~QKyE----------k 235 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK-KQKYE----------K 235 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH-HHHHH----------H
Confidence 4322 223455799999999988888889999999999999999999999988543211 11110 0
Q ss_pred ccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 040845 755 VDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRD 807 (824)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 807 (824)
+.....+.....+ =..+|.++...+.-|=..--++-|...-+.+.++-+..
T Consensus 236 I~EkK~s~~ie~L--C~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 236 ISEKKMSTPIEVL--CKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred HHHhhcCCCHHHH--hCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence 0000011000000 01346667777777777777777777666666655443
No 422
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1.6e-22 Score=215.31 Aligned_cols=261 Identities=22% Similarity=0.271 Sum_probs=199.8
Q ss_pred cCCCCceeeeccceEEEEEEECCC--cEEEEEEeeccccchhhhHHHHHHHHhcCCC----CcceeEEeee-ecCCeeEE
Q 040845 528 KFSENNLIGRGGFGSVYKARIRDG--MEVAVKVFNLQCGRAFKSFDVECAMMKSIRH----RNLVKVISSC-SNEEFKAL 600 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l 600 (824)
+|.+.+.||+|+||.||.|...+. ..+|+|............+..|+.++..+.. +++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999986643 5799998765533333377889999999973 6899999998 57888999
Q ss_pred EEeccCCCCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC-----CcEEEeecccc
Q 040845 601 VLEYMPHGSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-----MVAHLSDFGIA 674 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-----~~~kl~Dfg~a 674 (824)
||+.+ |.+|.++..... ..++..++..++.|++.+|.++| +.|++||||||.|+++... -.+.+.|||+|
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999 779999886555 68999999999999999999999 9999999999999999754 46999999999
Q ss_pred c--ccCCCCCc----cc--cccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhh
Q 040845 675 K--LLTGEDQS----MT--QTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDC 746 (824)
Q Consensus 675 ~--~~~~~~~~----~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 746 (824)
+ .+...... .. .....||..|+++..+.+...+.+.|+||+++++.|+..|..||........ ........
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~ 253 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDP 253 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHh
Confidence 9 33222211 11 1235599999999999999999999999999999999999999966432211 11111000
Q ss_pred CCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 040845 747 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDS 808 (824)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 808 (824)
.. ..... .....+..+.+++..+-..+..++|....+.+.+++....
T Consensus 254 ~~----~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 254 RK----LLTDR-----------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred hh----hcccc-----------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 00 00000 1112345567777777778999999999999998877554
No 423
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=5.1e-26 Score=226.86 Aligned_cols=309 Identities=22% Similarity=0.240 Sum_probs=222.9
Q ss_pred eeccCCccccccCccccCCCCCccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccC-C
Q 040845 74 FAVTNNSLSGCLSSITDVGLPNLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYD-N 152 (824)
Q Consensus 74 L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-n 152 (824)
.+.++-.++.+|..+. +.-..++|..|+|+.+.++.|+.+++|++|+|++|+|+.+.|++|.++.+|..|-+.+ |
T Consensus 51 VdCr~~GL~eVP~~LP----~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 51 VDCRGKGLTEVPANLP----PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred EEccCCCcccCcccCC----CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 4455556666666543 4778889999999988888899999999999999999988899999998888877766 8
Q ss_pred cCCCCcCcccccccCCCCCCCcEEECcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEecCCc
Q 040845 153 NLTSSTLDLSFLSSLSNCKSLTHISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNK 232 (824)
Q Consensus 153 ~i~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 232 (824)
+|+.++.+ .|.++.+|+.|.+.-|++..+.. ..|..+++|..|.+.+|.
T Consensus 127 kI~~l~k~-----~F~gL~slqrLllNan~i~Cir~--------------------------~al~dL~~l~lLslyDn~ 175 (498)
T KOG4237|consen 127 KITDLPKG-----AFGGLSSLQRLLLNANHINCIRQ--------------------------DALRDLPSLSLLSLYDNK 175 (498)
T ss_pred chhhhhhh-----HhhhHHHHHHHhcChhhhcchhH--------------------------HHHHHhhhcchhcccchh
Confidence 88888754 47777888888777777764433 445667888888888888
Q ss_pred cCCccchhhcCCCCCCEEEcccccCcccCCccccccCCccEEEccCccccccCCccccCCCCCcEEEcCCCCCCCCCCcc
Q 040845 233 LNGSIPITLGKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKVLSLGSNELTSIPLNF 312 (824)
Q Consensus 233 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~ 312 (824)
+..+...+|..+..++.+.+..|.+- ..|+++.+.. ++..| +..++...-.....+.++++..++..-
T Consensus 176 ~q~i~~~tf~~l~~i~tlhlA~np~i-----cdCnL~wla~-~~a~~------~ietsgarc~~p~rl~~~Ri~q~~a~k 243 (498)
T KOG4237|consen 176 IQSICKGTFQGLAAIKTLHLAQNPFI-----CDCNLPWLAD-DLAMN------PIETSGARCVSPYRLYYKRINQEDARK 243 (498)
T ss_pred hhhhccccccchhccchHhhhcCccc-----cccccchhhh-HHhhc------hhhcccceecchHHHHHHHhcccchhh
Confidence 88555558888888888888888743 1233333322 12222 223455555555666666666665442
Q ss_pred cc--cccccccccccc-cccCcCCccccccccchhhhcccccccccCCCccCCCCCCCeEEccCccccccCCcccccccc
Q 040845 313 WS--LKDILDLNLSSN-CFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEGSIPDSFGDLIS 389 (824)
Q Consensus 313 ~~--l~~L~~L~l~~N-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 389 (824)
+. +..+..=-.+.+ ....-....|.++++|+.|+|++|+|+.+.+.+|.++..+++|+|..|+|.......|.++..
T Consensus 244 f~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~ 323 (498)
T KOG4237|consen 244 FLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSG 323 (498)
T ss_pred hhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhcccc
Confidence 21 222222122222 233223346888888889999999988888888888888999999999888766778888888
Q ss_pred ccEEEccCcccCCCCcccccCCcccceeeccCCcccCCCC
Q 040845 390 LKSLNLSYNNLSGTIPVSLEKLSYLKDLNLSFNKLKGEIP 429 (824)
Q Consensus 390 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 429 (824)
|+.|+|.+|+|+...|.+|..+.+|.+|+|-.|+|.|.+-
T Consensus 324 L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~ 363 (498)
T KOG4237|consen 324 LKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCR 363 (498)
T ss_pred ceeeeecCCeeEEEecccccccceeeeeehccCcccCccc
Confidence 9999999999988888888888888999988888887543
No 424
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=6e-23 Score=216.74 Aligned_cols=167 Identities=21% Similarity=0.195 Sum_probs=130.3
Q ss_pred HhhccCCCCceeeeccceEEEEEEEC--CCcEEEEEEeeccc-----cchhhhHHHHHHHHhcCCCCcceeEEeeeecCC
Q 040845 524 QATDKFSENNLIGRGGFGSVYKARIR--DGMEVAVKVFNLQC-----GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEE 596 (824)
Q Consensus 524 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 596 (824)
...++|.+.+.||+|+||+||+|.++ +++.||||+..... ....+.+.+|+++++.++|+|+++.+..+ .
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C
Confidence 34578999999999999999999865 47788999865331 12345689999999999999998533322 4
Q ss_pred eeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCC-CCCCeeeCCCCcEEEeeccccc
Q 040845 597 FKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDL-KPSNVLLDDNMVAHLSDFGIAK 675 (824)
Q Consensus 597 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl-k~~Nill~~~~~~kl~Dfg~a~ 675 (824)
..++||||+++++|... .. .. ...++.++++|++||| +.+|+|||| ||+||+++.++.+||+|||+|+
T Consensus 92 ~~~LVmE~~~G~~L~~~-~~----~~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~ 160 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-RP----HG---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLAS 160 (365)
T ss_pred CcEEEEEccCCCCHHHh-Cc----cc---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECccce
Confidence 57999999999999632 11 11 1467899999999999 999999999 9999999999999999999999
Q ss_pred ccCCCCCccc------cccccccccccCccCcCCC
Q 040845 676 LLTGEDQSMT------QTQTLATIGYMAPEYGREG 704 (824)
Q Consensus 676 ~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~ 704 (824)
.+........ -+...+++.|+|||++...
T Consensus 161 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 161 VFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 7754432211 1345678899999988644
No 425
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=3.8e-22 Score=195.05 Aligned_cols=264 Identities=17% Similarity=0.191 Sum_probs=205.9
Q ss_pred ccCCCCceeeeccceEEEEEE-ECCCcEEEEEEeeccccchhhhHHHHHHHHhcCC-CCcceeEEeeeecCCeeEEEEec
Q 040845 527 DKFSENNLIGRGGFGSVYKAR-IRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIR-HRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 527 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
-.|.++++||+|.||+++.|+ +-++++||||.-... ....++..|...++.|. .++|..++-+..+..+-.+|+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 368999999999999999997 556999999975433 34567788999999884 68999999998888888999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC-----CcEEEeecccccccCC
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-----MVAHLSDFGIAKLLTG 679 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-----~~~kl~Dfg~a~~~~~ 679 (824)
+ |-+|+|+..-++..++..++..+|.|++.-++|+| ++..|.|||||+|+|+... ..+.++|||+|+.+.+
T Consensus 106 L-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred h-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 9 77999999988889999999999999999999999 9999999999999999643 4689999999999876
Q ss_pred CCCc-----cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhh
Q 040845 680 EDQS-----MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEV 754 (824)
Q Consensus 680 ~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (824)
.... .......||.+||+-..+.+...+.+.|+-|+|-++++.+.|..||.+..... .-..|-+ +
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~t-nK~kYeK---------I 251 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADT-NKEKYEK---------I 251 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcc-hHHHHHH---------h
Confidence 5432 22344569999999999999999999999999999999999999998854332 1111111 1
Q ss_pred ccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 040845 755 VDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSL 809 (824)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 809 (824)
-+.+-. ..... --+++|.++..-+.-.=..+-++-|..+-+..-+.++.+..
T Consensus 252 Ge~Kr~-T~i~~--Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 252 GETKRS-TPIEV--LCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred cccccc-CCHHH--HHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhc
Confidence 111100 00000 11245666777777777778888888877766666655443
No 426
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=1.3e-22 Score=228.63 Aligned_cols=261 Identities=20% Similarity=0.247 Sum_probs=192.4
Q ss_pred CCceeeeccceEEEEEEEC-CCcEEEEEEeec----c-ccc-hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 531 ENNLIGRGGFGSVYKARIR-DGMEVAVKVFNL----Q-CGR-AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 531 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~----~-~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
...++|.|++|.|+.+... ....++.|.++. . ... ....+..|+.+-..+.|+|++..+..+.+....+-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4678999999988877543 344455554331 1 111 11225668888889999999888888777666666699
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
|+++ +|..++.... .+...++-.++.|+..|+.|+| +.||.|||+|++|++++.+|.+||+|||.+..+.-+...
T Consensus 402 ~~~~-Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~ 476 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG-KLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK 476 (601)
T ss_pred cccH-HHHHHHhccc-ccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccCcch
Confidence 9999 9999988763 5788889999999999999999 999999999999999999999999999999877544433
Q ss_pred --cccccccccccccCccCcCCCCCCc-cchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhcccccc
Q 040845 684 --MTQTQTLATIGYMAPEYGREGQVST-NGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLL 760 (824)
Q Consensus 684 --~~~~~~~~~~~y~aPE~~~~~~~~~-~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (824)
....+..|+-.|+|||++.+..|.. ..||||.|++++.|.+|+.||......+..... .......
T Consensus 477 ~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~------------~~~~~~~ 544 (601)
T KOG0590|consen 477 NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT------------NNYSDQR 544 (601)
T ss_pred hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh------------hcccccc
Confidence 4556778999999999999999865 579999999999999999999764333221100 0000000
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhccccC
Q 040845 761 SQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIRDSLLRNVG 814 (824)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~~ 814 (824)
.............+.....+|.+|+++||.+|.|+++|++ +.|.+++.
T Consensus 545 ~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~------d~W~~~i~ 592 (601)
T KOG0590|consen 545 NIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN------DEWIRSIE 592 (601)
T ss_pred ccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh------ChHhhhcc
Confidence 0011111122345667888999999999999999999865 45555543
No 427
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.87 E-value=4.3e-22 Score=228.58 Aligned_cols=121 Identities=24% Similarity=0.331 Sum_probs=66.1
Q ss_pred CCCcEEEccCCcccccccccccCCCCCCEEeCCCCcCCcccChhhhCcCCCceeeccCCccccccCccccCCCCCccEEE
Q 040845 21 SNLKVLYLYNNRLQGEIIHEIGHLHNLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTNNSLSGCLSSITDVGLPNLEVLY 100 (824)
Q Consensus 21 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~ 100 (824)
.+...|+|+++.++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|++++|+++.+|..+ .++|+.|+
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~LtsLP~~l----~~~L~~L~ 247 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLTSIPATL----PDTIQEME 247 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccccCChhh----hccccEEE
Confidence 34566777777766 4555443 35667777777776 4555443 46666666666666554432 23566666
Q ss_pred ccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCC
Q 040845 101 LWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSS 157 (824)
Q Consensus 101 L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~ 157 (824)
|++|+++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|++++|+++.+
T Consensus 248 Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~L 298 (754)
T PRK15370 248 LSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRTL 298 (754)
T ss_pred CcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccccC
Confidence 6666665 3444332 34555555555555 2343332 3455555555555443
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=8.7e-22 Score=226.08 Aligned_cols=246 Identities=26% Similarity=0.431 Sum_probs=124.0
Q ss_pred CccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCCcCcccccccCCCCCCCc
Q 040845 95 NLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSSTLDLSFLSSLSNCKSLT 174 (824)
Q Consensus 95 ~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~~L~ 174 (824)
+...|+++++.++ .+|..+ .++|+.|+|++|+|+. +|..+. ++|++|++++|++++++.. + .++|+
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~I--p~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~LtsLP~~------l--~~~L~ 244 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACI--PEQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLTSIPAT------L--PDTIQ 244 (754)
T ss_pred CceEEEeCCCCcC-cCCccc--ccCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccccCChh------h--hcccc
Confidence 4555556555555 334333 2355666666666653 333332 3566666666666554421 1 13456
Q ss_pred EEECcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEecCCccCCccchhhcCCCCCCEEEccc
Q 040845 175 HISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNKLNGSIPITLGKLQKLQDVDLEY 254 (824)
Q Consensus 175 ~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 254 (824)
.|+|++|.+..++.. ++.+|+.|++++|+++ .+|..+. ++|+.|+|++|+++. +|..+. ++|+.|++++
T Consensus 245 ~L~Ls~N~L~~LP~~-----l~s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~ 313 (754)
T PRK15370 245 EMELSINRITELPER-----LPSALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQS 313 (754)
T ss_pred EEECcCCccCcCChh-----HhCCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcC
Confidence 666666665543221 1234555555555554 2333332 356666666666653 333322 3566666666
Q ss_pred ccCcccCCccccccCCccEEEccCccccccCCccccCCCCCcEEEcCCCCCCCCCCcccccccccccccccccccCcCCc
Q 040845 255 NQLEGSIPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKVLSLGSNELTSIPLNFWSLKDILDLNLSSNCFSGPLPL 334 (824)
Q Consensus 255 n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~ 334 (824)
|+++. +|..+ .++|+.|++++|.++. +|..+. ++|+.|++++|+|+.+|..+. ++|+.|++++|.++. +|.
T Consensus 314 N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~LP~~lp--~~L~~LdLs~N~Lt~-LP~ 384 (754)
T PRK15370 314 NSLTA-LPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITVLPETLP--PTITTLDVSRNALTN-LPE 384 (754)
T ss_pred Ccccc-CCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCCcCChhhc--CCcCEEECCCCcCCC-CCH
Confidence 66652 33322 2456666666666653 333332 456666666666666665432 456666666666652 333
Q ss_pred cccccccchhhhcccccccccCCCcc----CCCCCCCeEEccCcccc
Q 040845 335 EIRNLKALIEIDFSMNNFSGIIPMEI----GSLKNLENLFLEYNRLE 377 (824)
Q Consensus 335 ~~~~l~~L~~L~l~~N~l~~~~~~~~----~~l~~L~~L~L~~N~l~ 377 (824)
.+. ..|+.|++++|++. .+|..+ ..++++..|++.+|.++
T Consensus 385 ~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 385 NLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred hHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 332 24566666666665 233322 22344555555555554
No 429
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.85 E-value=4.7e-20 Score=199.60 Aligned_cols=258 Identities=32% Similarity=0.419 Sum_probs=198.9
Q ss_pred CCCCceeeeccceEEEEEEECCCcEEEEEEeeccccc---hhhhHHHHHHHHhcCCCC-cceeEEeeeecCCeeEEEEec
Q 040845 529 FSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGR---AFKSFDVECAMMKSIRHR-NLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 604 (824)
|...+.||.|+||.||++... ..+|+|.+...... ....+.+|+.+++.+.|+ +++++.+.+......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667789999999999999876 88999998665432 367789999999999988 799999999777778999999
Q ss_pred cCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-cEEEeecccccccCCCC
Q 040845 605 MPHGSLEKYLHSSN--YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLTGED 681 (824)
Q Consensus 605 ~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~Dfg~a~~~~~~~ 681 (824)
+.++++.+++.... ...+......++.|++.+++|+| ..+++|||+||+||+++..+ .++++|||.+.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997776554 26888999999999999999999 99999999999999999988 79999999998654433
Q ss_pred Ccc----ccccccccccccCccCcCC---CCCCccchHHHHHHHHHHHHhCCCCCcccccC--cchhhhhhhhhCCCcch
Q 040845 682 QSM----TQTQTLATIGYMAPEYGRE---GQVSTNGDVYSFGIMLMETFTRKKPTDELFNG--EMTLKHWVNDCLPISTM 752 (824)
Q Consensus 682 ~~~----~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~ 752 (824)
... ......++..|+|||...+ ..++...|+||+|++++++++|..||...... .......+......
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--- 233 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP--- 233 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc---
Confidence 221 2355679999999999887 57889999999999999999999996553321 11111111111100
Q ss_pred hhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 753 EVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.......... +......+.+++..|+..+|..|.++.+....
T Consensus 234 -----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 -----SLASPLSPSN--PELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred -----ccccccCccc--cchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0000000000 02223567889999999999999999988776
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=3.2e-21 Score=188.59 Aligned_cols=171 Identities=13% Similarity=0.145 Sum_probs=133.5
Q ss_pred hhccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhh---h------HHHHHHHHhcCCCCcceeEEeeeecC
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFK---S------FDVECAMMKSIRHRNLVKVISSCSNE 595 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~---~------~~~E~~~l~~l~h~niv~l~~~~~~~ 595 (824)
...+|...+++|.|+||.||.+.. ++..+|||+++........ . +.+|+..+.+++|++|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 358899999999999999999766 5778999999755332222 2 67899999999999999999886533
Q ss_pred --------CeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEE
Q 040845 596 --------EFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAH 667 (824)
Q Consensus 596 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 667 (824)
...++||||++|.+|.++.. .+. ....+++.++..+| ..+++|||++|+||+++++| ++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-EE
Confidence 35789999999999988732 222 24669999999999 99999999999999999988 99
Q ss_pred EeecccccccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHH
Q 040845 668 LSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETF 723 (824)
Q Consensus 668 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~ 723 (824)
++|||........... ..+.....+..++|+||||+.+....
T Consensus 175 liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999988654211110 01334445678999999999887654
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=1.7e-20 Score=182.51 Aligned_cols=139 Identities=17% Similarity=0.173 Sum_probs=108.8
Q ss_pred CceeeeccceEEEEEEECCCcEEEEEEeeccccc--h-------h-----------------hhHHHHHHHHhcCCCCcc
Q 040845 532 NNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGR--A-------F-----------------KSFDVECAMMKSIRHRNL 585 (824)
Q Consensus 532 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~E~~~l~~l~h~ni 585 (824)
...||+|+||.||+|...+|+.||||+++..... . . .....|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4689999999999999878999999998754211 0 0 122349999999988776
Q ss_pred eeEEeeeecCCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCCCeEecCCCCCCeeeCCCC
Q 040845 586 VKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYL-HFGYSAPVIHCDLKPSNVLLDDNM 664 (824)
Q Consensus 586 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~Dlk~~Nill~~~~ 664 (824)
.....+... ..++||||++++++....... ..++..++..++.|++.+++|+ | +.+|+||||||+||+++ ++
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~-~~ 154 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEE-CC
Confidence 443333222 237999999987776553322 3688899999999999999999 7 88999999999999998 47
Q ss_pred cEEEeeccccccc
Q 040845 665 VAHLSDFGIAKLL 677 (824)
Q Consensus 665 ~~kl~Dfg~a~~~ 677 (824)
.++++|||+|...
T Consensus 155 ~v~LiDFG~a~~~ 167 (190)
T cd05147 155 KLYIIDVSQSVEH 167 (190)
T ss_pred cEEEEEccccccC
Confidence 8999999999754
No 432
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=2.4e-20 Score=186.53 Aligned_cols=199 Identities=19% Similarity=0.242 Sum_probs=144.8
Q ss_pred CCCcceeEEeeee---------------------------cCCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHH
Q 040845 581 RHRNLVKVISSCS---------------------------NEEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDV 633 (824)
Q Consensus 581 ~h~niv~l~~~~~---------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i 633 (824)
+|||||++.++|. +....|+||..++. +|++++.... .+...+.-++.|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~--~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH--RSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC--CchHHHHHHHHHH
Confidence 4999999998763 23477899999855 9999997654 5566677799999
Q ss_pred HHHHHHhhcCCCCCeEecCCCCCCeeeC--CCC--cEEEeecccccccCCCC----CccccccccccccccCccCcCCCC
Q 040845 634 ASALEYLHFGYSAPVIHCDLKPSNVLLD--DNM--VAHLSDFGIAKLLTGED----QSMTQTQTLATIGYMAPEYGREGQ 705 (824)
Q Consensus 634 ~~~l~~LH~~~~~~ivH~Dlk~~Nill~--~~~--~~kl~Dfg~a~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~ 705 (824)
++|+.||| ++||.|||+|++|||+. +|+ .+.++|||++---...+ .........|....||||+.....
T Consensus 351 LEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 351 LEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 99999999 99999999999999983 333 57899999875322111 111122334777899999875321
Q ss_pred ------CCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHH
Q 040845 706 ------VSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 779 (824)
Q Consensus 706 ------~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 779 (824)
...|+|.|+.|.+.||+++..-||+...+...+...|-. ..-...++.|++.+.+
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe-------------------~qLPalp~~vpp~~rq 488 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQE-------------------SQLPALPSRVPPVARQ 488 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhh-------------------hhCCCCcccCChHHHH
Confidence 246899999999999999999999873222222222111 1112234567888999
Q ss_pred HHHHccccCCCCCCCHHHHHHHHHH
Q 040845 780 LALECTVESPEQRINAKEIVAKLLK 804 (824)
Q Consensus 780 l~~~cl~~dP~~Rpt~~evl~~L~~ 804 (824)
++...++.||.+|+++.-+...+.-
T Consensus 489 lV~~lL~r~pskRvsp~iAANvl~L 513 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAANVLNL 513 (598)
T ss_pred HHHHHhcCCccccCCccHHHhHHHH
Confidence 9999999999999998776666543
No 433
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.82 E-value=1.7e-19 Score=176.52 Aligned_cols=139 Identities=23% Similarity=0.258 Sum_probs=111.1
Q ss_pred CceeeeccceEEEEEEECCCcEEEEEEeeccccch--------------------------hhhHHHHHHHHhcCCCCcc
Q 040845 532 NNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRA--------------------------FKSFDVECAMMKSIRHRNL 585 (824)
Q Consensus 532 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~ni 585 (824)
.+.||+|++|.||+|+..+|+.||||+++...... ......|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46899999999999987789999999987542110 1123578999999999987
Q ss_pred eeEEeeeecCCeeEEEEeccCCCCHHHH-hhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEecCCCCCCeeeCCC
Q 040845 586 VKVISSCSNEEFKALVLEYMPHGSLEKY-LHSSNYSLDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDN 663 (824)
Q Consensus 586 v~l~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlk~~Nill~~~ 663 (824)
.....+.... .++||||++++++... +.. ..++..++..++.|++.++.++| . .+|+||||||+||+++ +
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~-~ 153 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH-D 153 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE-C
Confidence 5544443332 4799999988755433 332 25678889999999999999999 7 9999999999999998 8
Q ss_pred CcEEEeecccccccC
Q 040845 664 MVAHLSDFGIAKLLT 678 (824)
Q Consensus 664 ~~~kl~Dfg~a~~~~ 678 (824)
+.++|+|||+|....
T Consensus 154 ~~~~liDFG~a~~~~ 168 (190)
T cd05145 154 GKPYIIDVSQAVELD 168 (190)
T ss_pred CCEEEEEcccceecC
Confidence 999999999998654
No 434
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=4.6e-19 Score=169.18 Aligned_cols=187 Identities=15% Similarity=0.105 Sum_probs=139.0
Q ss_pred CCCceeeeccceEEEEEEECCCcEEEEEEeeccccc----hhhhHHHHHHHHhcCC-CCcceeEEeeeecCCeeEEEEec
Q 040845 530 SENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGR----AFKSFDVECAMMKSIR-HRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 530 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
.+...|++|+||+||.+.. .+.+++.+.+.....- ....+.+|+++|+++. |+++++++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3567899999999998866 5888888877543221 1225789999999995 5889999886 346899999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCC-CCCCeeeCCCCcEEEeecccccccCCCCCc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDL-KPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 683 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl-k~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 683 (824)
++|.+|.+.... ....++.|++++++++| ..||+|||| ||.||+++.++.++|+|||+|.........
T Consensus 80 I~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 80 LAGAAMYQRPPR--------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred ecCccHHhhhhh--------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 999998754321 12357889999999999 999999999 799999999999999999999865433211
Q ss_pred ----cc-------cccccccccccCccCcCCC-CC-CccchHHHHHHHHHHHHhCCCCCccc
Q 040845 684 ----MT-------QTQTLATIGYMAPEYGREG-QV-STNGDVYSFGIMLMETFTRKKPTDEL 732 (824)
Q Consensus 684 ----~~-------~~~~~~~~~y~aPE~~~~~-~~-~~~~DvwslG~~l~el~tg~~p~~~~ 732 (824)
.. ......++.|++|+-..-- .. -.+.+.++-|+-+|.++|++.|..+.
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 00 0112256677777633211 22 25678999999999999999987653
No 435
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=2.1e-20 Score=208.92 Aligned_cols=249 Identities=22% Similarity=0.246 Sum_probs=180.3
Q ss_pred cCCCCceeeeccceEEEEEEECCCcEEEEEEeecccc-chhhhHH---HHHHHHhcCCCCcceeEEeeeecCCeeEEEEe
Q 040845 528 KFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCG-RAFKSFD---VECAMMKSIRHRNLVKVISSCSNEEFKALVLE 603 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~---~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 603 (824)
+|...+.+|.+.|=+|.+|+++.|. |+||++-+..+ -..+.+. +|++ ...++|||.+++..+-..++..|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 6778889999999999999988777 99999866542 2233333 3444 556689999999988888888899999
Q ss_pred ccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC-CCC-
Q 040845 604 YMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GED- 681 (824)
Q Consensus 604 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~-~~~- 681 (824)
|+.+ +|.|.+.... .+...+...|+.|++.|+..+| ..+|+|||||.+|||++.=.-+.|+||..-+... +.+
T Consensus 102 yvkh-nLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred HHhh-hhhhhhccch-HHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 9965 9999997665 5777788889999999999999 9999999999999999999999999997543221 111
Q ss_pred ---CccccccccccccccCccCcCCC-----------CCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhh
Q 040845 682 ---QSMTQTQTLATIGYMAPEYGREG-----------QVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDC 746 (824)
Q Consensus 682 ---~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 746 (824)
..........-..|.|||-+... ..+++-||||+||+++|+++ |++||.-. .+..|....
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aYr~~~ 251 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAYRSGN 251 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhHhccC
Confidence 11111222233469999965431 15678899999999999988 67777531 111111110
Q ss_pred CCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 747 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
.. ++ +.....-....+++++..|++.||++|.+|++.++.-+
T Consensus 252 -~~------~~--------e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 252 -AD------DP--------EQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred -cc------CH--------HHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 00 00 00000011224788999999999999999999998844
No 436
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.80 E-value=1.6e-19 Score=193.66 Aligned_cols=216 Identities=29% Similarity=0.433 Sum_probs=165.3
Q ss_pred HhcCCCCcceeEEeeeecCCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe-EecCCCC
Q 040845 577 MKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPV-IHCDLKP 655 (824)
Q Consensus 577 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i-vH~Dlk~ 655 (824)
|+.+.|.|+.+++|.+.++...+.|.+|+..|+|.|.+......+++.....+.++++.|++|+| ..+| +|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh---~s~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLH---NSPIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHh---cCcceeeeeecc
Confidence 46789999999999999999999999999999999999988889999999999999999999999 4444 9999999
Q ss_pred CCeeeCCCCcEEEeecccccccCCCCCccccccccccccccCccCcCCC-------CCCccchHHHHHHHHHHHHhCCCC
Q 040845 656 SNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-------QVSTNGDVYSFGIMLMETFTRKKP 728 (824)
Q Consensus 656 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-------~~~~~~DvwslG~~l~el~tg~~p 728 (824)
.|.++|....+|++|||+.................-..-|.|||.+... ..+.+.||||||++++|+++.+.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 9999999999999999998876431111111222244569999988764 146779999999999999999999
Q ss_pred CcccccCcch--hhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 729 TDELFNGEMT--LKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 729 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
|+........ +..++.... .....+.+.. ....++.+..++.+||..+|++||+++++-..++.+.
T Consensus 158 ~~~~~~~~~~~eii~~~~~~~----~~~~rP~i~~--------~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKKGG----SNPFRPSIEL--------LNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred cccccccCChHHHHHHHHhcC----CCCcCcchhh--------hhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 9875443332 222222200 0111111110 0133446889999999999999999999999888765
Q ss_pred H
Q 040845 807 D 807 (824)
Q Consensus 807 ~ 807 (824)
.
T Consensus 226 ~ 226 (484)
T KOG1023|consen 226 K 226 (484)
T ss_pred c
Confidence 3
No 437
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.80 E-value=4e-19 Score=179.27 Aligned_cols=231 Identities=21% Similarity=0.324 Sum_probs=147.0
Q ss_pred cCCCCceeeeccceEEEEEEECC-CcEEEEEEeeccc---cchhhhHHHHHHHHhcCCC----------CcceeEEeeee
Q 040845 528 KFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQC---GRAFKSFDVECAMMKSIRH----------RNLVKVISSCS 593 (824)
Q Consensus 528 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h----------~niv~l~~~~~ 593 (824)
.+...+.||.|+++.||.+++.. ++++|||++.... ....+++++|.-....+.+ -.++-.++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 34567899999999999998764 8999999986554 2345566666655544332 12222222211
Q ss_pred ---------c---CC-----eeEEEEeccCCCCHHHHhhh---CCC---CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 040845 594 ---------N---EE-----FKALVLEYMPHGSLEKYLHS---SNY---SLDIFQRLNIMIDVASALEYLHFGYSAPVIH 650 (824)
Q Consensus 594 ---------~---~~-----~~~lv~e~~~~g~L~~~l~~---~~~---~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 650 (824)
. .. ..+++|+-+ .++|.+++.. ... ......+..+..|+++.+++|| ..|++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEe
Confidence 1 11 235788888 5588887542 221 2334455667799999999999 999999
Q ss_pred cCCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccccccccCccCcCC--------CCCCccchHHHHHHHHHHH
Q 040845 651 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE--------GQVSTNGDVYSFGIMLMET 722 (824)
Q Consensus 651 ~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslG~~l~el 722 (824)
+||+|+|++++.+|.++|+||+...... .... . ...+..|.|||.... -.++.+.|.|++|+++|.|
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g---~~~~-~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l 243 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAG---TRYR-C-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL 243 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETT---EEEE-G-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecC---ceee-c-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence 9999999999999999999999876532 1111 1 345678999996533 2478899999999999999
Q ss_pred HhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCC
Q 040845 723 FTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQR 792 (824)
Q Consensus 723 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 792 (824)
++|+.||+........ .| ... .. . +.++.+..||..+++.+|++|
T Consensus 244 WC~~lPf~~~~~~~~~--~~----------------~f~----~C--~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 244 WCGRLPFGLSSPEADP--EW----------------DFS----RC--R-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHSS-STCCCGGGSTS--GG----------------GGT----TS--S----HHHHHHHHHHT-SSGGGS
T ss_pred HHccCCCCCCCccccc--cc----------------cch----hc--C-CcCHHHHHHHHHHccCCcccC
Confidence 9999999863222110 00 000 01 1 457779999999999999988
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.80 E-value=1.3e-21 Score=173.30 Aligned_cols=176 Identities=26% Similarity=0.407 Sum_probs=118.9
Q ss_pred cCCccEEEccCccccccCCccccCCCCCcEEEcCCCCCCCCCCcccccccccccccccccccCcCCccccccccchhhhc
Q 040845 268 SVELYELELGGNKLSGSIPACFSNMTFLKVLSLGSNELTSIPLNFWSLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDF 347 (824)
Q Consensus 268 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 347 (824)
+..++.|.|++|+++ .+|..++.+.+|+.|++++|+|+++|..+.+++.|+.|+++-|++. ..|..|+.++.|+.|||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldl 109 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDL 109 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhc
Confidence 344555555555555 4444566666666666667777667666666777777777777666 66777777777777777
Q ss_pred cccccc-ccCCCccCCCCCCCeEEccCccccccCCccccccccccEEEccCcccCCCCcccccCCcccceeeccCCcccC
Q 040845 348 SMNNFS-GIIPMEIGSLKNLENLFLEYNRLEGSIPDSFGDLISLKSLNLSYNNLSGTIPVSLEKLSYLKDLNLSFNKLKG 426 (824)
Q Consensus 348 ~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 426 (824)
++|++. ...|..|..+..|+-|+|+.|.+. .+|..++.+++|+.|.+..|.+- ++|..++.+..|++|.+.+|+++-
T Consensus 110 tynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~v 187 (264)
T KOG0617|consen 110 TYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTV 187 (264)
T ss_pred cccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceeee
Confidence 777764 246677777777777777777776 67777777777777777777776 777777777777777777777777
Q ss_pred CCCCCCCcccc---ccccccCCcc
Q 040845 427 EIPRGGSFGNF---SAESFKGNEL 447 (824)
Q Consensus 427 ~~p~~~~~~~~---~~~~~~~n~~ 447 (824)
.+|..+++.-. .......|||
T Consensus 188 lppel~~l~l~~~k~v~r~E~NPw 211 (264)
T KOG0617|consen 188 LPPELANLDLVGNKQVMRMEENPW 211 (264)
T ss_pred cChhhhhhhhhhhHHHHhhhhCCC
Confidence 77765543322 2234555655
No 439
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=7.2e-21 Score=168.62 Aligned_cols=181 Identities=28% Similarity=0.465 Sum_probs=145.7
Q ss_pred CCCCCCEEEcccccCcccCCccccccCCccEEEccCccccccCCccccCCCCCcEEEcCCCCCCCCCCcccccccccccc
Q 040845 243 KLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKVLSLGSNELTSIPLNFWSLKDILDLN 322 (824)
Q Consensus 243 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ 322 (824)
.+.+.+.|.||+|+++ .+|..+..+.+|+.|++++|+|. ..|..++.++.|+.|+++-|++..+|.+|++++.|+.||
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~~lprgfgs~p~levld 108 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLNILPRGFGSFPALEVLD 108 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhhcCccccCCCchhhhhh
Confidence 4555666667777776 55666777777777777777777 566678888888888888888888888888888888888
Q ss_pred cccccccC-cCCccccccccchhhhcccccccccCCCccCCCCCCCeEEccCccccccCCccccccccccEEEccCcccC
Q 040845 323 LSSNCFSG-PLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEGSIPDSFGDLISLKSLNLSYNNLS 401 (824)
Q Consensus 323 l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 401 (824)
|++|++.. .+|..|-.++.|+.|+|++|.+. .+|..++.+++|+.|.+..|.+- .+|..++.+..|+.|++.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 88888854 57888889999999999999998 78889999999999999999998 68999999999999999999998
Q ss_pred CCCcccccCCcc---cceeeccCCcccCCC
Q 040845 402 GTIPVSLEKLSY---LKDLNLSFNKLKGEI 428 (824)
Q Consensus 402 ~~~p~~~~~l~~---L~~L~l~~N~l~~~~ 428 (824)
.+|..++++.- =+...+..|+|-..|
T Consensus 187 -vlppel~~l~l~~~k~v~r~E~NPwv~pI 215 (264)
T KOG0617|consen 187 -VLPPELANLDLVGNKQVMRMEENPWVNPI 215 (264)
T ss_pred -ecChhhhhhhhhhhHHHHhhhhCCCCChH
Confidence 88888776533 245667777775444
No 440
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.78 E-value=3.7e-20 Score=197.67 Aligned_cols=224 Identities=25% Similarity=0.299 Sum_probs=180.3
Q ss_pred eeeccceEEEEEE----ECCCcEEEEEEeecccc--chhhhHHHHHHHHhcCC-CCcceeEEeeeecCCeeEEEEeccCC
Q 040845 535 IGRGGFGSVYKAR----IRDGMEVAVKVFNLQCG--RAFKSFDVECAMMKSIR-HRNLVKVISSCSNEEFKALVLEYMPH 607 (824)
Q Consensus 535 lg~G~~g~V~~~~----~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 607 (824)
+|+|+||.|+.++ .+.|.-+|+|+.++... ........|..++...+ ||.++++...++.+...+++.+|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6899999999764 23477899998765532 12224556888899886 99999999999999999999999999
Q ss_pred CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccc
Q 040845 608 GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQT 687 (824)
Q Consensus 608 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 687 (824)
|.+...+.... .++......+...++-+++++| +.+|+|||+|++||+++.+|++++.|||+++..-.....
T Consensus 82 g~lft~l~~~~-~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~---- 153 (612)
T KOG0603|consen 82 GDLFTRLSKEV-MFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA---- 153 (612)
T ss_pred chhhhccccCC-chHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc----
Confidence 99988887665 5677778888999999999999 999999999999999999999999999999865432221
Q ss_pred cccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhh
Q 040845 688 QTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHF 767 (824)
Q Consensus 688 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (824)
.||..|||||++. ....++|.||||++++||+||..||.. .....+.. ...
T Consensus 154 --cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-----~~~~~Il~--------------------~~~ 204 (612)
T KOG0603|consen 154 --CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-----DTMKRILK--------------------AEL 204 (612)
T ss_pred --ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-----HHHHHHhh--------------------hcc
Confidence 6899999999988 567899999999999999999999876 11111111 122
Q ss_pred hhHHHHHHHHHHHHHHccccCCCCCCCH
Q 040845 768 VAKEQCVSFVFNLALECTVESPEQRINA 795 (824)
Q Consensus 768 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~ 795 (824)
..|......+.+++..++..+|..|.-.
T Consensus 205 ~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 205 EMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred CCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 2344556778889999999999999865
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.77 E-value=2.6e-20 Score=199.70 Aligned_cols=81 Identities=21% Similarity=0.232 Sum_probs=48.1
Q ss_pred Ccccccccc-cCCcccccCCCCCcEEEccCCccccc----ccccccCCCCCCEEeCCCCcCCc------ccChhhhCcCC
Q 040845 2 PSIINNFLT-STTPKEIDNISNLKVLYLYNNRLQGE----IIHEIGHLHNLGFLDLSQNKLLG------TIPAAIFNVST 70 (824)
Q Consensus 2 ~~l~~n~i~-~~~p~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~n~l~~------~~~~~~~~l~~ 70 (824)
|+|..+.++ ...+..|..+.+|++|+|++|.++.. ++..+...++|++|+++++.+.+ .++.++..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 456666666 45556666677777777777776432 34445566667777777776652 12334445555
Q ss_pred CceeeccCCccc
Q 040845 71 LKAFAVTNNSLS 82 (824)
Q Consensus 71 L~~L~L~~n~l~ 82 (824)
|+.|++++|.+.
T Consensus 83 L~~L~l~~~~~~ 94 (319)
T cd00116 83 LQELDLSDNALG 94 (319)
T ss_pred eeEEEccCCCCC
Confidence 666666555554
No 442
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.76 E-value=8.3e-21 Score=203.57 Aligned_cols=285 Identities=23% Similarity=0.250 Sum_probs=146.5
Q ss_pred EEEccCCeee-eecCccccCCCCCceEeccCcccccc----CCccccCCCCCCEEEccCCcCCCCcCcc-cccccCCCCC
Q 040845 98 VLYLWGNNFS-GTIPHFIFNASKLSKLALEMNSFSGF----IPSTFGNLRNLEWLTLYDNNLTSSTLDL-SFLSSLSNCK 171 (824)
Q Consensus 98 ~L~L~~n~i~-~~~~~~l~~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~~~~-~~~~~l~~l~ 171 (824)
.|+|.++.++ ......+..+.+|+.|+++++.++.. ++..+...++|++|+++++.+...+... .....+.+++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4566666665 33444555566677777777776432 3334455566666666666654211110 0122344555
Q ss_pred CCcEEECcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEecCCccCCc----cchhhcCC-CC
Q 040845 172 SLTHISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNKLNGS----IPITLGKL-QK 246 (824)
Q Consensus 172 ~L~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~----~~~~~~~l-~~ 246 (824)
+|++|++++|.+....+..+. ..... ++|++|++++|++.+. +...+..+ ++
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~----------------------~l~~~-~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~ 138 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLE----------------------SLLRS-SSLQELKLNNNGLGDRGLRLLAKGLKDLPPA 138 (319)
T ss_pred ceeEEEccCCCCChhHHHHHH----------------------HHhcc-CcccEEEeeCCccchHHHHHHHHHHHhCCCC
Confidence 666666666655432221110 01112 4467777777666521 22234444 66
Q ss_pred CCEEEcccccCccc----CCccccccCCccEEEccCcccccc----CCccccCCCCCcEEEcCCCCCCCCCCcccccccc
Q 040845 247 LQDVDLEYNQLEGS----IPDSICLSVELYELELGGNKLSGS----IPACFSNMTFLKVLSLGSNELTSIPLNFWSLKDI 318 (824)
Q Consensus 247 L~~L~L~~n~l~~~----~~~~~~~~~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L 318 (824)
|+.|++++|.+++. .+..+..+.+|++|++++|.+++. ++..+..+++|++|++++|.++....
T Consensus 139 L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~-------- 210 (319)
T cd00116 139 LEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGA-------- 210 (319)
T ss_pred ceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHH--------
Confidence 66666666666522 122333444555555555555421 11222333445555555554432110
Q ss_pred cccccccccccCcCCccccccccchhhhcccccccccCCCccC-----CCCCCCeEEccCccccc----cCCcccccccc
Q 040845 319 LDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIG-----SLKNLENLFLEYNRLEG----SIPDSFGDLIS 389 (824)
Q Consensus 319 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~----~~~~~~~~l~~ 389 (824)
..++..+..+++|+.|++++|.+++.....+. ..+.|+.|++++|.+++ .+...+..+++
T Consensus 211 -----------~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~ 279 (319)
T cd00116 211 -----------SALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKES 279 (319)
T ss_pred -----------HHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCC
Confidence 01222344555666666666666542222221 23678888888887762 23344555677
Q ss_pred ccEEEccCcccCCC----CcccccCC-cccceeeccCCcc
Q 040845 390 LKSLNLSYNNLSGT----IPVSLEKL-SYLKDLNLSFNKL 424 (824)
Q Consensus 390 L~~L~L~~N~l~~~----~p~~~~~l-~~L~~L~l~~N~l 424 (824)
|+.+++++|.++.. +...+... +.|++|++.+|+|
T Consensus 280 L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 280 LLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred ccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 88888888888743 44444444 5677777777754
No 443
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=5.7e-18 Score=194.22 Aligned_cols=196 Identities=23% Similarity=0.283 Sum_probs=160.3
Q ss_pred hhccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCC---CCcceeEEeeeecCCeeEEE
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIR---HRNLVKVISSCSNEEFKALV 601 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv 601 (824)
--+.|.+.+.||+|+||+||+|...+|+.||+|+-+..... +|.--.+++.+|+ -+-|..+..++.-.+.-++|
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv 772 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV 772 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence 34678899999999999999999888999999997655332 2233345566666 23445555555566777899
Q ss_pred EeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC-------CCCcEEEeecccc
Q 040845 602 LEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD-------DNMVAHLSDFGIA 674 (824)
Q Consensus 602 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-------~~~~~kl~Dfg~a 674 (824)
+||.+.|+|.+++... ...++.-+..+..|++..+++|| ..+||||||||+|+++. +...++|+|||.+
T Consensus 773 ~ey~~~Gtlld~~N~~-~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~s 848 (974)
T KOG1166|consen 773 SEYSPYGTLLDLINTN-KVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRS 848 (974)
T ss_pred eeccccccHHHhhccC-CCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEecccc
Confidence 9999999999999844 47899999999999999999999 99999999999999994 2446899999999
Q ss_pred cccCCCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCC
Q 040845 675 KLLTGEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKK 727 (824)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~ 727 (824)
..+.--..........+|-.+-.+|...+..+++++|.|.++.+++-|+.|+.
T Consensus 849 iDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 849 IDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 87654333344556678889999999999999999999999999999999975
No 444
>PRK10345 hypothetical protein; Provisional
Probab=99.76 E-value=7.7e-18 Score=164.95 Aligned_cols=137 Identities=14% Similarity=0.255 Sum_probs=107.0
Q ss_pred CCCCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcC-----CCCcceeEEeeeecCC---eeE-
Q 040845 529 FSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-----RHRNLVKVISSCSNEE---FKA- 599 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~~~- 599 (824)
+.-.++||+|+||.||. +.+....+||++........+.+.+|+.+++.+ .||||++++|++.++. ..+
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34467899999999996 433333479988765444567789999999999 5799999999998764 333
Q ss_pred EEEec--cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHH-HHhhcCCCCCeEecCCCCCCeeeCC----CCcEEEeecc
Q 040845 600 LVLEY--MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASAL-EYLHFGYSAPVIHCDLKPSNVLLDD----NMVAHLSDFG 672 (824)
Q Consensus 600 lv~e~--~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~Dlk~~Nill~~----~~~~kl~Dfg 672 (824)
+|+|| +.+|+|.+++.+.. +++. ..++.+++.++ +||| +.+|+||||||+||+++. ++.++|+||+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~--~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCR--YEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EEecCCCCcchhHHHHHHccc--ccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 78999 55789999997643 4444 35678888777 9999 999999999999999974 3489999944
Q ss_pred cc
Q 040845 673 IA 674 (824)
Q Consensus 673 ~a 674 (824)
-+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 33
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.72 E-value=3.7e-17 Score=164.63 Aligned_cols=143 Identities=18% Similarity=0.153 Sum_probs=111.7
Q ss_pred hccCCCCceeeeccceEEEEEE--ECCCcEEEEEEeeccccc------------------------hhhhHHHHHHHHhc
Q 040845 526 TDKFSENNLIGRGGFGSVYKAR--IRDGMEVAVKVFNLQCGR------------------------AFKSFDVECAMMKS 579 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~ 579 (824)
-.-|.+.+.||+|++|.||+|. ..+|+.||||+++..... ....+..|+..+++
T Consensus 27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 3457888999999999999998 567999999998754210 11235679999999
Q ss_pred CCCCc--ceeEEeeeecCCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-eEecCCCCC
Q 040845 580 IRHRN--LVKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAP-VIHCDLKPS 656 (824)
Q Consensus 580 l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~Dlk~~ 656 (824)
+.+.. +.+++++ ...++||||++++++........ ..+..++..++.|++.++++|| +.+ |+||||||+
T Consensus 107 L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~ 178 (237)
T smart00090 107 LYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV-EPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSEY 178 (237)
T ss_pred HHhcCCCCCeeeEe----cCceEEEEEecCCcccccccccC-CcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChh
Confidence 97533 3444443 23479999999988876543222 4566677899999999999999 999 999999999
Q ss_pred CeeeCCCCcEEEeeccccccc
Q 040845 657 NVLLDDNMVAHLSDFGIAKLL 677 (824)
Q Consensus 657 Nill~~~~~~kl~Dfg~a~~~ 677 (824)
||+++ ++.++++|||.|...
T Consensus 179 NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 179 NILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hEEEE-CCCEEEEEChhhhcc
Confidence 99999 889999999998754
No 446
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=8.6e-17 Score=161.07 Aligned_cols=134 Identities=25% Similarity=0.348 Sum_probs=113.9
Q ss_pred ceeeeccceEEEEEEECCCcEEEEEEeeccccc--------hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 533 NLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGR--------AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
+.||+|++|.||+|.+ +|..|++|+....... ....+.+|+.++..++|+++.....++......++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999988 5788999986543211 124577899999999999988877777777788999999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 676 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 676 (824)
++|++|.+++.... . ++..++.+++.+++++| +.+++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986533 2 78899999999999999 99999999999999999 78999999998863
No 447
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.70 E-value=4.4e-18 Score=178.44 Aligned_cols=174 Identities=27% Similarity=0.432 Sum_probs=131.0
Q ss_pred CeeEEEEeccCCCCHHHHhhhCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccc
Q 040845 596 EFKALVLEYMPHGSLEKYLHSSN--YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 673 (824)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 673 (824)
.+.|+.|++++..+|.+|+.+.+ ...++.....++.|++.|++| ++.+|+|+||.||++..+..+||.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhh
Confidence 36789999999999999996443 567888899999999999999 6789999999999999999999999999
Q ss_pred ccccCCCC----CccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHh-CCCCCcccccCcchhhhhhhhhCC
Q 040845 674 AKLLTGED----QSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFT-RKKPTDELFNGEMTLKHWVNDCLP 748 (824)
Q Consensus 674 a~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 748 (824)
........ .....+..+||.+||+||.+.+..|+.++||||+|++++|+++ =..+++. .....+.-...+|
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er----~~t~~d~r~g~ip 478 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER----IATLTDIRDGIIP 478 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH----HHhhhhhhcCCCC
Confidence 98765444 2344566789999999999999999999999999999999987 2222221 1111111111111
Q ss_pred CcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 040845 749 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEI 798 (824)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ev 798 (824)
.. .. .+ .+.-+.++.+++...|++||++.++
T Consensus 479 ~~----------------~~--~d-~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 479 PE----------------FL--QD-YPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hH----------------Hh--hc-CcHHHHHHHHhcCCCcccCchHHHH
Confidence 00 00 01 1223578999999999999955543
No 448
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=1e-16 Score=158.39 Aligned_cols=140 Identities=24% Similarity=0.191 Sum_probs=111.0
Q ss_pred hhccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccccc----------------------hhhhHHHHHHHHhcCCC
Q 040845 525 ATDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGR----------------------AFKSFDVECAMMKSIRH 582 (824)
Q Consensus 525 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~h 582 (824)
....|.+.+.||+|+||.||+|..++|+.||||+++..... .......|+.++..+.|
T Consensus 13 ~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 92 (198)
T cd05144 13 RGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE 92 (198)
T ss_pred cCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH
Confidence 33447888999999999999999888999999987643210 11235678999999987
Q ss_pred Cc--ceeEEeeeecCCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee
Q 040845 583 RN--LVKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 660 (824)
Q Consensus 583 ~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 660 (824)
++ +...++. ...++||||+++++|.+.... .....++.+++.++.++| +.+++||||+|+||++
T Consensus 93 ~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nill 158 (198)
T cd05144 93 EGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNILV 158 (198)
T ss_pred cCCCCCceeec----CCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccEEE
Confidence 74 4444442 345899999999998765431 235678899999999999 8999999999999999
Q ss_pred CCCCcEEEeecccccccC
Q 040845 661 DDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 661 ~~~~~~kl~Dfg~a~~~~ 678 (824)
++++.++|+|||.+....
T Consensus 159 ~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 159 DDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cCCCcEEEEECCccccCC
Confidence 999999999999997654
No 449
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=2.3e-16 Score=179.68 Aligned_cols=144 Identities=21% Similarity=0.299 Sum_probs=115.7
Q ss_pred HHHHHHhhccCCCCceeeeccceEEEEEEECCCcEEEEEEeecc--cc------chhhhHHHHHHHHhcCCCCcceeEEe
Q 040845 519 YLELFQATDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQ--CG------RAFKSFDVECAMMKSIRHRNLVKVIS 590 (824)
Q Consensus 519 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~------~~~~~~~~E~~~l~~l~h~niv~l~~ 590 (824)
+.........|...+.||+|+||+||+|.+. +..+++|+.... .. ...+.+.+|+++++.++|++++....
T Consensus 325 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~ 403 (535)
T PRK09605 325 WIKEEEVKRRKIPDHLIGKGAEADIKKGEYL-GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVI 403 (535)
T ss_pred eccccccccccCccceeccCCcEEEEEEeec-CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEE
Confidence 3333344455677899999999999999876 444555543211 11 12356788999999999999998888
Q ss_pred eeecCCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEee
Q 040845 591 SCSNEEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 670 (824)
Q Consensus 591 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 670 (824)
++.++...++||||+++++|.+++. ....++.+++++++||| +.+++|||+||+||++ +++.++++|
T Consensus 404 ~~~~~~~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liD 470 (535)
T PRK09605 404 YDVDPEEKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLID 470 (535)
T ss_pred EEEeCCCCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEe
Confidence 8777777889999999999999875 35678999999999999 9999999999999999 678999999
Q ss_pred cccccc
Q 040845 671 FGIAKL 676 (824)
Q Consensus 671 fg~a~~ 676 (824)
||+++.
T Consensus 471 FGla~~ 476 (535)
T PRK09605 471 FGLGKY 476 (535)
T ss_pred Cccccc
Confidence 999874
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=1.3e-16 Score=158.16 Aligned_cols=130 Identities=21% Similarity=0.336 Sum_probs=107.0
Q ss_pred eeeeccceEEEEEEECCCcEEEEEEeecccc--------chhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEecc
Q 040845 534 LIGRGGFGSVYKARIRDGMEVAVKVFNLQCG--------RAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYM 605 (824)
Q Consensus 534 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 605 (824)
.||+|+||.||+|.+. |..|++|+...... ...+.+.+|+++++.++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 4899999999999864 78999998643211 11255678999999999887665555555666778999999
Q ss_pred CCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 040845 606 PHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 676 (824)
Q Consensus 606 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 676 (824)
+|++|.+++..... .++.+++.+++++| +.+++|+|++|.||+++ ++.++++|||.+..
T Consensus 80 ~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND--------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH--------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998754321 78999999999999 99999999999999999 88999999998875
No 451
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.64 E-value=1.7e-16 Score=178.07 Aligned_cols=212 Identities=25% Similarity=0.316 Sum_probs=144.8
Q ss_pred hccCCCCceeeeccceEEEEEEECC-CcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
..+|+.++.|..|+||.||.++++. .+.+|+|+=+ +. .+.+- ++.....|++|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~-----lilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QN-----LILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccc-cc-----hhhhc--cccccCCccee------------------
Confidence 3678889999999999999998774 6778885422 11 11110 33333344433
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC--
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ-- 682 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 682 (824)
|+-...+...+ .++. +++.+++|+| ..+|+|||+||+|.+++.-|++|++|||+++.--..-.
T Consensus 136 ---gDc~tllk~~g-~lPv--------dmvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 ---GDCATLLKNIG-PLPV--------DMVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred ---chhhhhcccCC-CCcc--------hhhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 33334444333 2332 2278899999 99999999999999999999999999998764211000
Q ss_pred ----------c-cccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcc
Q 040845 683 ----------S-MTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIST 751 (824)
Q Consensus 683 ----------~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 751 (824)
. ......+||+.|.|||++....|+..+|.|++|+++||.+.|+.||.+... +.-+.+.+...+..
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp-eelfg~visd~i~w-- 277 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-EELFGQVISDDIEW-- 277 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH-HHHHhhhhhhhccc--
Confidence 0 111345799999999999999999999999999999999999999987422 22233332221110
Q ss_pred hhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHH
Q 040845 752 MEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAK 796 (824)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ 796 (824)
.+. .+..+.++.+++.+.++++|..|--..
T Consensus 278 ---------pE~------dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 278 ---------PEE------DEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred ---------ccc------CcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 000 112356788999999999999998443
No 452
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.60 E-value=5.4e-15 Score=144.90 Aligned_cols=136 Identities=24% Similarity=0.241 Sum_probs=98.1
Q ss_pred CceeeeccceEEEEEEECCCcEEEEEEeeccccch--hhh----------------------HHHHHHHHhcCCCCc--c
Q 040845 532 NNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRA--FKS----------------------FDVECAMMKSIRHRN--L 585 (824)
Q Consensus 532 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~n--i 585 (824)
.+.||+|+||+||+|...+|+.||||+++...... ... ...|...+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999998889999999987542111 011 134555666664432 4
Q ss_pred eeEEeeeecCCeeEEEEeccCCCCHHH-HhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEecCCCCCCeeeCCC
Q 040845 586 VKVISSCSNEEFKALVLEYMPHGSLEK-YLHSSNYSLDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDN 663 (824)
Q Consensus 586 v~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlk~~Nill~~~ 663 (824)
.+.+++ ...++||||++++++.. .+.... .. .+...++.+++.++.++| . .+|+|+|+||+||+++ +
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD-D 150 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE-C
Confidence 444443 23589999999854321 111111 11 567889999999999999 7 9999999999999999 8
Q ss_pred CcEEEeecccccccC
Q 040845 664 MVAHLSDFGIAKLLT 678 (824)
Q Consensus 664 ~~~kl~Dfg~a~~~~ 678 (824)
+.++++|||.+....
T Consensus 151 ~~~~liDfg~a~~~~ 165 (187)
T cd05119 151 GKVYIIDVPQAVEID 165 (187)
T ss_pred CcEEEEECccccccc
Confidence 999999999997654
No 453
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.57 E-value=1.8e-16 Score=179.15 Aligned_cols=257 Identities=24% Similarity=0.295 Sum_probs=197.5
Q ss_pred hccCCCCceeeeccceEEEEEEECC--CcEEEEEEeeccc--cchhhhHHHHHHHHhcCC-CCcceeEEeeeecCCeeEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD--GMEVAVKVFNLQC--GRAFKSFDVECAMMKSIR-HRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 600 (824)
...|...+.||+|+|+.|-.+.... ...+|+|.+.... ....+....|..+-+.+. |+|++.+++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 3567778889999999998886533 4456666654432 333455566888888886 9999999999999999999
Q ss_pred EEeccCCCCHHHHh-hhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-cEEEeecccccccC
Q 040845 601 VLEYMPHGSLEKYL-HSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLT 678 (824)
Q Consensus 601 v~e~~~~g~L~~~l-~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~Dfg~a~~~~ 678 (824)
+.+|.+++++.+.+ +......+......++.|+..++.|+|. ..++.|+|+||+|.+++..+ ..+++|||+|..+.
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 99999999999888 4443356666778899999999999996 67899999999999999999 99999999999887
Q ss_pred C-CCCccccccccc-cccccCccCcCCC-CCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhc
Q 040845 679 G-EDQSMTQTQTLA-TIGYMAPEYGREG-QVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVV 755 (824)
Q Consensus 679 ~-~~~~~~~~~~~~-~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (824)
. .+.........| ++.|+|||...+. ......|+||.|+++.-+++|..||+...........|.......
T Consensus 177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~------ 250 (601)
T KOG0590|consen 177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRF------ 250 (601)
T ss_pred ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccccccc------
Confidence 6 454445555667 9999999998875 457889999999999999999999987655544444443221000
Q ss_pred cccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 040845 756 DANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVA 800 (824)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 800 (824)
.............++..+++..+|..|.+.+++..
T Consensus 251 ----------~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 251 ----------TQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ----------ccCccccCChhhhhcccccccCCchhccccccccc
Confidence 00011122344677888999999999999888754
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.57 E-value=1.9e-14 Score=135.80 Aligned_cols=135 Identities=21% Similarity=0.262 Sum_probs=113.2
Q ss_pred CCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCC--CcceeEEeeeecCCeeEEEEeccCCC
Q 040845 531 ENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRH--RNLVKVISSCSNEEFKALVLEYMPHG 608 (824)
Q Consensus 531 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 608 (824)
+.+.||+|.++.||+++.. +..+++|....... ...+..|+.+++.++| ..+++++++....+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK-DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEec-CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 3578999999999999986 47899999865432 4678899999999976 58999999888888899999999887
Q ss_pred CHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 040845 609 SLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 676 (824)
Q Consensus 609 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 676 (824)
.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.+..
T Consensus 79 ~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 76544 4556778899999999999932225799999999999999999999999998864
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.55 E-value=3.5e-16 Score=164.04 Aligned_cols=195 Identities=28% Similarity=0.413 Sum_probs=168.3
Q ss_pred CCCCCCEEEecCCccCCccchhhcCCCCCCEEEcccccCcccCCccccccCCccEEEccCccccccCCccccCCCCCcEE
Q 040845 219 NLTDLTTIVLGGNKLNGSIPITLGKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKVL 298 (824)
Q Consensus 219 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 298 (824)
.++.-...||+.|++. .+|..+..+..|+.+.|.+|.+. .+|..++.+..|++|+|+.|+++ ..|..+..++ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 4556677899999998 78888999999999999999998 88999999999999999999999 6777777877 9999
Q ss_pred EcCCCCCCCCCCcccccccccccccccccccCcCCccccccccchhhhcccccccccCCCccCCCCCCCeEEccCccccc
Q 040845 299 SLGSNELTSIPLNFWSLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEG 378 (824)
Q Consensus 299 ~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 378 (824)
.+++|+++.+|..+..+..|..||.+.|.+. .+|..++++.+|+.|.+..|++. .+|.+++.|+ |..||+|.|+++
T Consensus 149 i~sNNkl~~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis- 224 (722)
T KOG0532|consen 149 IVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS- 224 (722)
T ss_pred EEecCccccCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCcee-
Confidence 9999999999999999999999999999998 68889999999999999999998 4677777665 889999999998
Q ss_pred cCCccccccccccEEEccCcccCCCCcccccCCcc---cceeeccCC
Q 040845 379 SIPDSFGDLISLKSLNLSYNNLSGTIPVSLEKLSY---LKDLNLSFN 422 (824)
Q Consensus 379 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~l~~N 422 (824)
.+|-.|..|..|++|.|.+|+|+ ..|..+.-.-. .++|+..-+
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 79999999999999999999998 77776644333 355555555
No 456
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.55 E-value=4.2e-14 Score=142.78 Aligned_cols=136 Identities=19% Similarity=0.258 Sum_probs=106.5
Q ss_pred Cceee-eccceEEEEEEECCCcEEEEEEeeccc-------------cchhhhHHHHHHHHhcCCCCcc--eeEEeeeecC
Q 040845 532 NNLIG-RGGFGSVYKARIRDGMEVAVKVFNLQC-------------GRAFKSFDVECAMMKSIRHRNL--VKVISSCSNE 595 (824)
Q Consensus 532 ~~~lg-~G~~g~V~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 595 (824)
...|| .||.|+||.+... +..+|||.+.... ......+.+|++++..++|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35788 8999999999876 7889999885321 1123457789999999998875 6677764332
Q ss_pred -C---eeEEEEeccCC-CCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEee
Q 040845 596 -E---FKALVLEYMPH-GSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 670 (824)
Q Consensus 596 -~---~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 670 (824)
. ..++||||+++ .+|.+++... .++.. .+.+++.++++|| +.||+||||||.|||++.++.++++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEE
Confidence 2 23599999997 6999888653 34433 3678999999999 99999999999999999999999999
Q ss_pred ccccccc
Q 040845 671 FGIAKLL 677 (824)
Q Consensus 671 fg~a~~~ 677 (824)
||.+...
T Consensus 186 fg~~~~~ 192 (239)
T PRK01723 186 FDRGELR 192 (239)
T ss_pred CCCcccC
Confidence 9988753
No 457
>PLN03150 hypothetical protein; Provisional
Probab=99.50 E-value=3.2e-14 Score=163.68 Aligned_cols=118 Identities=35% Similarity=0.606 Sum_probs=103.9
Q ss_pred cchhhhcccccccccCCCccCCCCCCCeEEccCccccccCCccccccccccEEEccCcccCCCCcccccCCcccceeecc
Q 040845 341 ALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEGSIPDSFGDLISLKSLNLSYNNLSGTIPVSLEKLSYLKDLNLS 420 (824)
Q Consensus 341 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 420 (824)
.++.|+|++|.+++.+|..++.+++|+.|+|++|.+++.+|..++.+++|+.|+|++|+++|.+|..+..+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCC--CccccccccccCCccccCCCCCCCCCCC
Q 040845 421 FNKLKGEIPRGG--SFGNFSAESFKGNELLCGSPNLQVPPCK 460 (824)
Q Consensus 421 ~N~l~~~~p~~~--~~~~~~~~~~~~n~~~c~~~~~~~~~c~ 460 (824)
+|+++|.+|..- .......+.+.+|+.+|+.|. ..+|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~--l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG--LRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC--CCCCc
Confidence 999999999742 123345677899999999874 34664
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.50 E-value=8.4e-16 Score=161.21 Aligned_cols=195 Identities=31% Similarity=0.449 Sum_probs=170.4
Q ss_pred EEecCCccCCccchhh-cCCCCCCEEEcccccCcccCCccccccCCccEEEccCccccccCCccccCCCCCcEEEcCCCC
Q 040845 226 IVLGGNKLNGSIPITL-GKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKVLSLGSNE 304 (824)
Q Consensus 226 L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 304 (824)
|.|++-++....-.++ ..+.--...||+.|++. .+|..++.+..|+.+.|+.|.+. .+|.++.++..|..|+|+.|+
T Consensus 55 l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~Nq 132 (722)
T KOG0532|consen 55 LLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQ 132 (722)
T ss_pred cccccchhhcCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccch
Confidence 4455555542211222 34566678999999999 89999999999999999999999 789999999999999999999
Q ss_pred CCCCCCcccccccccccccccccccCcCCccccccccchhhhcccccccccCCCccCCCCCCCeEEccCccccccCCccc
Q 040845 305 LTSIPLNFWSLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEGSIPDSF 384 (824)
Q Consensus 305 l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 384 (824)
+..+|..++.++ |+.|.+++|+++ .+|..++.+..|..||.+.|.+. .+|..++++.+|+.|++..|++. .+|+.+
T Consensus 133 lS~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El 208 (722)
T KOG0532|consen 133 LSHLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEEL 208 (722)
T ss_pred hhcCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHH
Confidence 999999988765 899999999999 78999999999999999999998 67889999999999999999999 578788
Q ss_pred cccccccEEEccCcccCCCCcccccCCcccceeeccCCcccCCC
Q 040845 385 GDLISLKSLNLSYNNLSGTIPVSLEKLSYLKDLNLSFNKLKGEI 428 (824)
Q Consensus 385 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 428 (824)
..| .|..||+|.|+++ .+|..|.+|..|++|-|.+|+|+..+
T Consensus 209 ~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 209 CSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred hCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCCh
Confidence 865 6899999999998 99999999999999999999999543
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.44 E-value=1.8e-13 Score=150.98 Aligned_cols=261 Identities=30% Similarity=0.379 Sum_probs=128.5
Q ss_pred EEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCC-CCCEEEccCCcCCCCcCcccccccCCCCCCCcEE
Q 040845 98 VLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLR-NLEWLTLYDNNLTSSTLDLSFLSSLSNCKSLTHI 176 (824)
Q Consensus 98 ~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~~~l~~l~~L~~L 176 (824)
.|+++.|.+. .....+..++.++.|++.+|.++ .++.....+. +|++|++++|.+..++ ..+..+++|+.|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~~l~------~~~~~l~~L~~L 168 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIESLP------SPLRNLPNLKNL 168 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchhhhh------hhhhcccccccc
Confidence 3455555543 11222333455555555555555 2333444442 5666666666655542 124555666666
Q ss_pred ECcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEecCCccCCccchhhcCCCCCCEEEccccc
Q 040845 177 SLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNKLNGSIPITLGKLQKLQDVDLEYNQ 256 (824)
Q Consensus 177 ~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 256 (824)
++++|++..+++. .+.+++|+.|++++|++. .+|........|++|.+++|.
T Consensus 169 ~l~~N~l~~l~~~---------------------------~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~ 220 (394)
T COG4886 169 DLSFNDLSDLPKL---------------------------LSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNS 220 (394)
T ss_pred ccCCchhhhhhhh---------------------------hhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCc
Confidence 6666665543221 112344444444444444 233332333345555555553
Q ss_pred CcccCCccccccCCccEEEccCccccccCCccccCCCCCcEEEcCCCCCCCCCCcccccccccccccccccccCcCCccc
Q 040845 257 LEGSIPDSICLSVELYELELGGNKLSGSIPACFSNMTFLKVLSLGSNELTSIPLNFWSLKDILDLNLSSNCFSGPLPLEI 336 (824)
Q Consensus 257 l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~ 336 (824)
+. ..+..+..+.++..+.+.+|++. ..+..++.+++++.|++++|.++.++. +..+.+++.|++++|.+....+...
T Consensus 221 ~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~-~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 221 II-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSISS-LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred ce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccccccccc-ccccCccCEEeccCccccccchhhh
Confidence 22 23344444455555555555554 224455566666666666666666665 5566666666666666665444443
Q ss_pred cccccchhhhcccccccccCCCccCCCCCCCeEEccCccccccCCccccccccccEEEccCcccC
Q 040845 337 RNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEGSIPDSFGDLISLKSLNLSYNNLS 401 (824)
Q Consensus 337 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 401 (824)
....... +... +.+. ..+..+.....+....+..+... ..+..+.....+..++...+...
T Consensus 298 ~~~~~~~-~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 358 (394)
T COG4886 298 LLLLLLE-LLLN-LLLT-LKALELKLNSILLNNNILSNGET-SSPEALSILESLNNLWTLDNALD 358 (394)
T ss_pred ccchhHH-hhhh-hhhh-ccccccccccccccccccccccc-ccchhhcccccccCceecccccc
Confidence 3222222 1111 2222 22233333444445555555555 45556666666666666666655
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.44 E-value=2e-13 Score=150.58 Aligned_cols=262 Identities=29% Similarity=0.351 Sum_probs=172.0
Q ss_pred ceEeccCccccccCCccccCCCCCCEEEccCCcCCCCcCcccccccCCCCC-CCcEEECcCCCCCccCCccccccccccc
Q 040845 121 SKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSSTLDLSFLSSLSNCK-SLTHISLSNNPLDGILPRTYVGNLSHSL 199 (824)
Q Consensus 121 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~-~L~~L~Ls~n~l~~~~~~~~~~~l~~~L 199 (824)
..|++..|.+. .....+..++.++.|++.+|.++.++.. ...++ +|+.|++++|.+..+
T Consensus 96 ~~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~~i~~~------~~~~~~nL~~L~l~~N~i~~l------------- 155 (394)
T COG4886 96 PSLDLNLNRLR-SNISELLELTNLTSLDLDNNNITDIPPL------IGLLKSNLKELDLSDNKIESL------------- 155 (394)
T ss_pred ceeeccccccc-cCchhhhcccceeEEecCCcccccCccc------cccchhhcccccccccchhhh-------------
Confidence 35777777774 2334556667888888888888877642 23342 777777777777633
Q ss_pred cEEEeecCcceecCCccCCCCCCCCEEEecCCccCCccchhhcCCCCCCEEEcccccCcccCCccccccCCccEEEccCc
Q 040845 200 KNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNKLNGSIPITLGKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGN 279 (824)
Q Consensus 200 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n 279 (824)
|..+..+++|+.|++++|++. .+|.....+++|+.|++++|+++ .+|........|++|.+++|
T Consensus 156 --------------~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N 219 (394)
T COG4886 156 --------------PSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNN 219 (394)
T ss_pred --------------hhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCC
Confidence 244567788888888888887 44545557788888888888887 55555555666888888888
Q ss_pred cccccCCccccCCCCCcEEEcCCCCCCCCCCcccccccccccccccccccCcCCccccccccchhhhcccccccccCCCc
Q 040845 280 KLSGSIPACFSNMTFLKVLSLGSNELTSIPLNFWSLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPME 359 (824)
Q Consensus 280 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 359 (824)
.+. ..+..+.+++++..+.+.+|++..++..+..+++++.|++++|.++.... ++.+.+++.|++++|.+...++..
T Consensus 220 ~~~-~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 220 SII-ELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred cce-ecchhhhhcccccccccCCceeeeccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 644 45666777888888888888888877777778888888888888874333 778888888888888888665554
Q ss_pred cCCCCCCCeEEccCccccccCCccccccccccEEEccCcccCCCCcccccCCcccceeeccCCccc
Q 040845 360 IGSLKNLENLFLEYNRLEGSIPDSFGDLISLKSLNLSYNNLSGTIPVSLEKLSYLKDLNLSFNKLK 425 (824)
Q Consensus 360 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 425 (824)
..... +..+... +.+. ..+........+....+..+... ..+..+.....+..++...+...
T Consensus 297 ~~~~~-~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 358 (394)
T COG4886 297 ALLLL-LLELLLN-LLLT-LKALELKLNSILLNNNILSNGET-SSPEALSILESLNNLWTLDNALD 358 (394)
T ss_pred hccch-hHHhhhh-hhhh-ccccccccccccccccccccccc-ccchhhcccccccCceecccccc
Confidence 43322 2222222 3333 22223333344455555556655 55556655555666665555444
No 461
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.43 E-value=4.1e-13 Score=147.58 Aligned_cols=141 Identities=23% Similarity=0.277 Sum_probs=101.4
Q ss_pred CceeeeccceEEEEEEECCCcEEEEEEeeccccchh----------------------------------------hhHH
Q 040845 532 NNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAF----------------------------------------KSFD 571 (824)
Q Consensus 532 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~ 571 (824)
.+.||.|++|.||+|+.++|+.||||+.++...... -++.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 368999999999999999999999999864321100 0244
Q ss_pred HHHHHHhcCC----CCcceeEEeeee-cCCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHH-HHHHhhcCCC
Q 040845 572 VECAMMKSIR----HRNLVKVISSCS-NEEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVAS-ALEYLHFGYS 645 (824)
Q Consensus 572 ~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~-~l~~LH~~~~ 645 (824)
.|+..+.+++ |.+-+.+-.++. .....++||||++|++|.++........+ +..++..++. .+..+| .
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~---~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVL---R 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHH---h
Confidence 4665555552 333333333332 23456899999999999888654322222 3456666666 467889 8
Q ss_pred CCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 646 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 646 ~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
.|++|+|++|.||++++++.++++|||++..+.
T Consensus 276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 999999999999999999999999999998764
No 462
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.35 E-value=1.1e-12 Score=141.19 Aligned_cols=249 Identities=23% Similarity=0.263 Sum_probs=183.4
Q ss_pred cCCCCceeee--ccceEEEEEEE---CCCcEEEEEEeecccc--chhhhHHHHHHHHhcC-CCCcceeEEeeeecCCeeE
Q 040845 528 KFSENNLIGR--GGFGSVYKARI---RDGMEVAVKVFNLQCG--RAFKSFDVECAMMKSI-RHRNLVKVISSCSNEEFKA 599 (824)
Q Consensus 528 ~~~~~~~lg~--G~~g~V~~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 599 (824)
.|.+...+|. |.+|.||.+.. .++..+|+|.-+.... ....+-.+|+.....+ .|++.++.+..+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556788999 99999999976 3588899997443322 2333344567666677 4999999999999999999
Q ss_pred EEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHH----HHHHhhcCCCCCeEecCCCCCCeeeCCC-CcEEEeecccc
Q 040845 600 LVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVAS----ALEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFGIA 674 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~Dfg~a 674 (824)
+-+|++ +.++.++.+.....++....+....+..+ |+.++| ...++|-|+||.||+...+ ..++++|||+.
T Consensus 195 iqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred eeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCccee
Confidence 999999 47999998877766788888888888888 999999 9999999999999999999 89999999999
Q ss_pred cccCCCCCcccc---ccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcc
Q 040845 675 KLLTGEDQSMTQ---TQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPIST 751 (824)
Q Consensus 675 ~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 751 (824)
..+.+....... ....+...|++||... +.++.++|+|++|.++.+..++..+.... ....|.+.....-.
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g-----~~~~W~~~r~~~ip 344 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVG-----KNSSWSQLRQGYIP 344 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCC-----CCCCccccccccCc
Confidence 887655422111 1224777899999875 46789999999999999999987754321 01112111100000
Q ss_pred hhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 040845 752 MEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAK 801 (824)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 801 (824)
.+..+ .-..++...+..|+..+|-.|++++.+.++
T Consensus 345 ~e~~~---------------~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 345 LEFCE---------------GGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred hhhhc---------------CcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 00010 113345558889999999999999887653
No 463
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=1.9e-13 Score=139.71 Aligned_cols=165 Identities=25% Similarity=0.252 Sum_probs=117.9
Q ss_pred cCCCCCcEEEccCCccccccc-ccccCCCCCCEEeCCCCcCCcc--cChhhhCcCCCceeeccCCccccccCccccCCCC
Q 040845 18 DNISNLKVLYLYNNRLQGEII-HEIGHLHNLGFLDLSQNKLLGT--IPAAIFNVSTLKAFAVTNNSLSGCLSSITDVGLP 94 (824)
Q Consensus 18 ~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~--~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~ 94 (824)
.++.+|++..|.++.+..... .....|++++.||||.|-+..- +..-...+++|+.|+|+.|++...........++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 567888999999998873222 3567889999999999988732 3345567889999999999887665555545678
Q ss_pred CccEEEccCCeeeee-cCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCCcCcccccccCCCCCCC
Q 040845 95 NLEVLYLWGNNFSGT-IPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSSTLDLSFLSSLSNCKSL 173 (824)
Q Consensus 95 ~L~~L~L~~n~i~~~-~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~~L 173 (824)
+|+.|.|+.|.++.. +-..+..+++|+.|+|..|..-.+.......+..|++|||++|++-+.+. ......++.|
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~----~~~~~~l~~L 273 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQ----GYKVGTLPGL 273 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccccccc----ccccccccch
Confidence 888888888888622 23345567888888888885332444455567788888888888766542 2346777888
Q ss_pred cEEECcCCCCCcc
Q 040845 174 THISLSNNPLDGI 186 (824)
Q Consensus 174 ~~L~Ls~n~l~~~ 186 (824)
+.|+++.+.|.++
T Consensus 274 ~~Lnls~tgi~si 286 (505)
T KOG3207|consen 274 NQLNLSSTGIASI 286 (505)
T ss_pred hhhhccccCcchh
Confidence 8888887777654
No 464
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.33 E-value=2.3e-12 Score=126.94 Aligned_cols=204 Identities=20% Similarity=0.307 Sum_probs=140.0
Q ss_pred HHhcCCCCcceeEEeeeecCC-----eeEEEEeccCCCCHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 040845 576 MMKSIRHRNLVKVISSCSNEE-----FKALVLEYMPHGSLEKYLHSSN---YSLDIFQRLNIMIDVASALEYLHFGYSAP 647 (824)
Q Consensus 576 ~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ 647 (824)
-+-.+-|.|+|+++.|+.+.+ ...++.|||+.|++..++++.. ..+....-.+|+.||..||.||| .++..
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLh-s~~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLH-SCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh-ccCCc
Confidence 344556999999999986543 4678999999999999997643 45667777889999999999999 56899
Q ss_pred eEecCCCCCCeeeCCCCcEEEeecccccccCCC--CCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhC
Q 040845 648 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE--DQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTR 725 (824)
Q Consensus 648 ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg 725 (824)
|+|+++.-+-|++..+|-+|+.--.-....... ..........+-++|.|||+-.....+.++|||+||....||..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 999999999999999998888532211111000 001111223467899999998888888999999999999999887
Q ss_pred CCCCcccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 040845 726 KKPTDELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLL 803 (824)
Q Consensus 726 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 803 (824)
..-..........-. .+......... ..=+.++.+|+...|..||+|.+.+.|.-
T Consensus 279 Eiq~tnseS~~~~ee-------------~ia~~i~~len----------~lqr~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEE-------------NIANVIIGLEN----------GLQRGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred eeccCCCcceeehhh-------------hhhhheeeccC----------ccccCcCcccccCCCCCCcchhhhhcCce
Confidence 753211111000000 00000010000 00134678899999999999999876643
No 465
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.31 E-value=1.1e-13 Score=137.84 Aligned_cols=248 Identities=21% Similarity=0.256 Sum_probs=125.9
Q ss_pred ccCCCCCcEEEccCCcccccc----cccccCCCCCCEEeCCCC---cCCcccChhhhCcCCCceeeccCCccccccCccc
Q 040845 17 IDNISNLKVLYLYNNRLQGEI----IHEIGHLHNLGFLDLSQN---KLLGTIPAAIFNVSTLKAFAVTNNSLSGCLSSIT 89 (824)
Q Consensus 17 ~~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~Ls~n---~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 89 (824)
+..+..++.|+||+|.+..+- ...+.+.++|+..++|+= ++...+|+++..+. ..
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~----------------~a-- 87 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLS----------------KA-- 87 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHH----------------HH--
Confidence 445566677777777766442 233455666666666653 22233443322110 00
Q ss_pred cCCCCCccEEEccCCeeeeecC----ccccCCCCCceEeccCccccccCCc-------------cccCCCCCCEEEccCC
Q 040845 90 DVGLPNLEVLYLWGNNFSGTIP----HFIFNASKLSKLALEMNSFSGFIPS-------------TFGNLRNLEWLTLYDN 152 (824)
Q Consensus 90 ~~~l~~L~~L~L~~n~i~~~~~----~~l~~l~~L~~L~L~~N~i~~~~~~-------------~~~~l~~L~~L~L~~n 152 (824)
..+.|+|++|+||.|.+....+ ..+.+++.|++|+|.+|.+.-..-. ....-+.|+++..++|
T Consensus 88 L~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rN 167 (382)
T KOG1909|consen 88 LLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRN 167 (382)
T ss_pred HhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecc
Confidence 0123455555555555542222 2345566677777777766522111 1223456777777777
Q ss_pred cCCCCcCcccccccCCCCCCCcEEECcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEecCCc
Q 040845 153 NLTSSTLDLSFLSSLSNCKSLTHISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNK 232 (824)
Q Consensus 153 ~i~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 232 (824)
++.+.+... +...|...+.|+.+.++.|.|...... .+...|..+++|+.|||++|-
T Consensus 168 rlen~ga~~-~A~~~~~~~~leevr~~qN~I~~eG~~----------------------al~eal~~~~~LevLdl~DNt 224 (382)
T KOG1909|consen 168 RLENGGATA-LAEAFQSHPTLEEVRLSQNGIRPEGVT----------------------ALAEALEHCPHLEVLDLRDNT 224 (382)
T ss_pred ccccccHHH-HHHHHHhccccceEEEecccccCchhH----------------------HHHHHHHhCCcceeeecccch
Confidence 766554332 334455556666666666665422110 223455667777777777776
Q ss_pred cCCc----cchhhcCCCCCCEEEcccccCcccCCcccc-----ccCCccEEEccCcccccc----CCccccCCCCCcEEE
Q 040845 233 LNGS----IPITLGKLQKLQDVDLEYNQLEGSIPDSIC-----LSVELYELELGGNKLSGS----IPACFSNMTFLKVLS 299 (824)
Q Consensus 233 l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~~~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~ 299 (824)
++.. +..+++.+++|++|++++|.+......+|. ..++|+.|.+.+|.|+.. +..++...+.|..|+
T Consensus 225 ft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLn 304 (382)
T KOG1909|consen 225 FTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLN 304 (382)
T ss_pred hhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhc
Confidence 6532 334455666677777777666644333322 234455555555544411 222333344455555
Q ss_pred cCCCCC
Q 040845 300 LGSNEL 305 (824)
Q Consensus 300 L~~N~l 305 (824)
|++|++
T Consensus 305 LngN~l 310 (382)
T KOG1909|consen 305 LNGNRL 310 (382)
T ss_pred CCcccc
Confidence 555544
No 466
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.31 E-value=9.8e-13 Score=123.66 Aligned_cols=124 Identities=29% Similarity=0.406 Sum_probs=26.9
Q ss_pred CCcccccccccCCcccccCCCCCcEEEccCCccccccccccc-CCCCCCEEeCCCCcCCcccChhhhCcCCCceeeccCC
Q 040845 1 MPSIINNFLTSTTPKEIDNISNLKVLYLYNNRLQGEIIHEIG-HLHNLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTNN 79 (824)
Q Consensus 1 ~~~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 79 (824)
|+.|..+.|..+.. +.+...+++|+|++|.|+. + ..++ .+.+|+.||||+|.|+.. +.+..+++|++|++++|
T Consensus 1 ~~~lt~~~i~~~~~--~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N 74 (175)
T PF14580_consen 1 MVRLTANMIEQIAQ--YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNN 74 (175)
T ss_dssp ---------------------------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS
T ss_pred Cccccccccccccc--ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCC
Confidence 55566666665543 4555567777777777773 2 2354 466777777777777733 23555666666666666
Q ss_pred ccccccCccccCCCCCccEEEccCCeeeeec-CccccCCCCCceEeccCcccc
Q 040845 80 SLSGCLSSITDVGLPNLEVLYLWGNNFSGTI-PHFIFNASKLSKLALEMNSFS 131 (824)
Q Consensus 80 ~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~-~~~l~~l~~L~~L~L~~N~i~ 131 (824)
+|+.+..... ..+|+|++|+|++|+|...- -..+..+++|+.|+|.+|.+.
T Consensus 75 ~I~~i~~~l~-~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 75 RISSISEGLD-KNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp ---S-CHHHH-HH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCCccccchH-HhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 6665432211 12555666666666554211 122334444444444444444
No 467
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.30 E-value=2.7e-13 Score=131.47 Aligned_cols=209 Identities=21% Similarity=0.175 Sum_probs=146.3
Q ss_pred CCccCCCCCCCCEEEecCCccCCccchhhcCCCCCCEEEcccccCcccCCccccccCCccEEEccCcc-ccccCCccccC
Q 040845 213 IPEEITNLTDLTTIVLGGNKLNGSIPITLGKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNK-LSGSIPACFSN 291 (824)
Q Consensus 213 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~ 291 (824)
+|-.+.-+.+|+.+.++++.-..+. +.-..-+.|+++...+.-++. . +.+.....+..+.-+.-. ..|..-.....
T Consensus 206 l~f~l~~f~~l~~~~~s~~~~~~i~-~~~~~kptl~t~~v~~s~~~~-~-~~l~pe~~~~D~~~~E~~t~~G~~~~~~dT 282 (490)
T KOG1259|consen 206 LSFNLNAFRNLKTLKFSALSTENIV-DIELLKPTLQTICVHNTTIQD-V-PSLLPETILADPSGSEPSTSNGSALVSADT 282 (490)
T ss_pred cccchHHhhhhheeeeeccchhhee-ceeecCchhheeeeecccccc-c-ccccchhhhcCccCCCCCccCCceEEecch
Confidence 3444555667777777776544222 222233667777776665542 1 112222222222221111 11222334455
Q ss_pred CCCCcEEEcCCCCCCCCCCcccccccccccccccccccCcCCccccccccchhhhcccccccccCCCccCCCCCCCeEEc
Q 040845 292 MTFLKVLSLGSNELTSIPLNFWSLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFL 371 (824)
Q Consensus 292 l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 371 (824)
+..|+++||++|.|+.+..+..-+|.++.|++|+|.+... ..+..+++|+.||||+|.++. ..+.-..+.+.++|.|
T Consensus 283 Wq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 283 WQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIKTLKL 359 (490)
T ss_pred HhhhhhccccccchhhhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHh-hhhhHhhhcCEeeeeh
Confidence 6789999999999999999988899999999999999843 348889999999999999984 4455567889999999
Q ss_pred cCccccccCCccccccccccEEEccCcccCCCC-cccccCCcccceeeccCCcccCCCC
Q 040845 372 EYNRLEGSIPDSFGDLISLKSLNLSYNNLSGTI-PVSLEKLSYLKDLNLSFNKLKGEIP 429 (824)
Q Consensus 372 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p 429 (824)
++|.|.. + ..++.+-+|..||+++|+|.... -..++++|-|+.+.|.+|++.+.+.
T Consensus 360 a~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 360 AQNKIET-L-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhhhHhh-h-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 9999984 3 35788889999999999997321 3568899999999999999997654
No 468
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.30 E-value=6.1e-11 Score=128.81 Aligned_cols=167 Identities=18% Similarity=0.233 Sum_probs=130.5
Q ss_pred ECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHH
Q 040845 548 IRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRL 627 (824)
Q Consensus 548 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 627 (824)
-.++.+|.|..++.......+...+-++-|+.+|||+|+++++.+..+++.|+|+|.+. .|..++.+.+ ...+-
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~----~~~v~ 107 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG----KEEVC 107 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH----HHHHH
Confidence 34688899988876655445667788999999999999999999999999999999983 6787877543 55566
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccccccccccccccCccCcCCCCCC
Q 040845 628 NIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGQVS 707 (824)
Q Consensus 628 ~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 707 (824)
.-++||+.||.+||+ +.+++|++|.-..|++++.|+.||++|.++....+... .......--.|..|+.+....
T Consensus 108 ~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 108 LGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--
Confidence 678999999999985 78999999999999999999999999998875533221 111112223466776543322
Q ss_pred ccchHHHHHHHHHHHHhCC
Q 040845 708 TNGDVYSFGIMLMETFTRK 726 (824)
Q Consensus 708 ~~~DvwslG~~l~el~tg~ 726 (824)
-..|.|.||++++|++.|.
T Consensus 182 ~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cchhhhhHHHHHHHHhCcc
Confidence 3569999999999999993
No 469
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.29 E-value=1e-11 Score=119.64 Aligned_cols=126 Identities=22% Similarity=0.243 Sum_probs=96.0
Q ss_pred ceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcce-eEEeeeecCCeeEEEEeccCCCCHH
Q 040845 533 NLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLV-KVISSCSNEEFKALVLEYMPHGSLE 611 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~g~L~ 611 (824)
+.++.|.++.||+++.. +..|++|+...... ....+..|+.+++.+.+.+++ +++.+.. ...++||||+++.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCccc
Confidence 56889999999999876 78899998754322 234568899999998655544 4554432 3457999999998775
Q ss_pred HHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-----eEecCCCCCCeeeCCCCcEEEeeccccc
Q 040845 612 KYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAP-----VIHCDLKPSNVLLDDNMVAHLSDFGIAK 675 (824)
Q Consensus 612 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 675 (824)
+. . ......+.+++++++.|| ..+ ++|+|++|.||+++ ++.++++|||.+.
T Consensus 80 ~~----~-----~~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 80 TE----D-----FSDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cc----c-----ccCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 43 0 112345789999999999 666 59999999999999 6789999999876
No 470
>PLN03150 hypothetical protein; Provisional
Probab=99.29 E-value=4.7e-12 Score=145.86 Aligned_cols=114 Identities=39% Similarity=0.533 Sum_probs=105.7
Q ss_pred cccccccccccccCcCCccccccccchhhhcccccccccCCCccCCCCCCCeEEccCccccccCCccccccccccEEEcc
Q 040845 317 DILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEGSIPDSFGDLISLKSLNLS 396 (824)
Q Consensus 317 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 396 (824)
.++.|+|++|.+.+.+|..+..+++|+.|+|++|.+++.+|..++.+++|+.|+|++|++++.+|..++.+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCcccccCC-cccceeeccCCcccCCCCC
Q 040845 397 YNNLSGTIPVSLEKL-SYLKDLNLSFNKLKGEIPR 430 (824)
Q Consensus 397 ~N~l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~p~ 430 (824)
+|+++|.+|..+..+ .++..+++.+|+..|..|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~ 533 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG 533 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC
Confidence 999999999998764 4678899999987776553
No 471
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.27 E-value=1e-11 Score=137.79 Aligned_cols=147 Identities=20% Similarity=0.200 Sum_probs=95.9
Q ss_pred hccCCCCceeeeccceEEEEEEECC-CcEEEEEEeeccccc----------------------------------hhh--
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIRD-GMEVAVKVFNLQCGR----------------------------------AFK-- 568 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~-- 568 (824)
-..|+. +.||.|++|.||+|+.++ |+.||||+.++...+ ..+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 789999999999999887 999999998754210 001
Q ss_pred ----hHHHHHHHHhcCC----CCcceeEEeeeec-CCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHH-HHH
Q 040845 569 ----SFDVECAMMKSIR----HRNLVKVISSCSN-EEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVAS-ALE 638 (824)
Q Consensus 569 ----~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~-~l~ 638 (824)
++.+|+..+.+++ +...+.+-.++.+ ....++||||++|+++.++-.-.....+... ++...+. -+.
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~---la~~~v~~~~~ 274 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKL---LAERGVEVFFT 274 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHH---HHHHHHHHHHH
Confidence 2334544444442 4444444444433 4566799999999999875321111222221 2222222 122
Q ss_pred HhhcCCCCCeEecCCCCCCeeeCCCC----cEEEeecccccccCC
Q 040845 639 YLHFGYSAPVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLLTG 679 (824)
Q Consensus 639 ~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~Dfg~a~~~~~ 679 (824)
.+. ..|++|+|+||.||+++.++ .++++|||++..+..
T Consensus 275 Qif---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 275 QVF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 334 67999999999999999888 999999999987754
No 472
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.25 E-value=8e-13 Score=145.84 Aligned_cols=64 Identities=30% Similarity=0.393 Sum_probs=34.4
Q ss_pred CCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCCcCcccccccCCCCCCCcEEECcCCCCCcc
Q 040845 116 NASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSSTLDLSFLSSLSNCKSLTHISLSNNPLDGI 186 (824)
Q Consensus 116 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~ 186 (824)
.+..++.+.+..|.|.. +-..+..+.+|+.|++.+|.|..+.. .+..+++|++|++++|.|+.+
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~------~l~~~~~L~~L~ls~N~I~~i 133 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIEN------LLSSLVNLQVLDLSFNKITKL 133 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhccc------chhhhhcchheeccccccccc
Confidence 34455555555555553 22335555666666666666655421 144556666666666666544
No 473
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.24 E-value=1.1e-12 Score=144.69 Aligned_cols=245 Identities=27% Similarity=0.301 Sum_probs=140.1
Q ss_pred CCCccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCCcCcccccccCCCCCC
Q 040845 93 LPNLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSSTLDLSFLSSLSNCKS 172 (824)
Q Consensus 93 l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~~ 172 (824)
+..++.++++.|.|.. +-..+..+++|+.|++.+|+|..+ ...+..+++|++|+|++|.|+.+. .+..++.
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~-------~l~~l~~ 141 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE-------GLSTLTL 141 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc-------chhhccc
Confidence 5566666677777763 334466677788888888887744 223677888888888888887763 4666777
Q ss_pred CcEEECcCCCCCccCCccccccccccccEEEeecCcceecCCccCCCCCCCCEEEecCCccCCccc-hhhcCCCCCCEEE
Q 040845 173 LTHISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVSGGIPEEITNLTDLTTIVLGGNKLNGSIP-ITLGKLQKLQDVD 251 (824)
Q Consensus 173 L~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~ 251 (824)
|+.|++++|.|..+ ..+..+..|+.+++++|.+..+.+ . ...+.+++.++
T Consensus 142 L~~L~l~~N~i~~~----------------------------~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~ 192 (414)
T KOG0531|consen 142 LKELNLSGNLISDI----------------------------SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELD 192 (414)
T ss_pred hhhheeccCcchhc----------------------------cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHh
Confidence 88888888877644 223335666777777777664333 1 35566666666
Q ss_pred cccccCcccCCccccccCCccEEEccCccccccCCccccCCC--CCcEEEcCCCCCCCCCCccccccccccccccccccc
Q 040845 252 LEYNQLEGSIPDSICLSVELYELELGGNKLSGSIPACFSNMT--FLKVLSLGSNELTSIPLNFWSLKDILDLNLSSNCFS 329 (824)
Q Consensus 252 L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~ 329 (824)
+..|.+. ....+..+..+..+++..|+++..-+ +..+. .|+.+++++|++..++
T Consensus 193 l~~n~i~--~i~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~~~-------------------- 248 (414)
T KOG0531|consen 193 LGGNSIR--EIEGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISRSP-------------------- 248 (414)
T ss_pred ccCCchh--cccchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCcccccc--------------------
Confidence 6666665 22233333444444555555542211 11111 1444444444444433
Q ss_pred CcCCccccccccchhhhcccccccccCCCccCCCCCCCeEEccCcccccc---CCcc-ccccccccEEEccCcccCCCCc
Q 040845 330 GPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEGS---IPDS-FGDLISLKSLNLSYNNLSGTIP 405 (824)
Q Consensus 330 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~-~~~l~~L~~L~L~~N~l~~~~p 405 (824)
..+..+..+..|++.+|++... ..+...+.+..+.++.|.+... .... ....+.++.+.+.+|.+....+
T Consensus 249 ----~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 249 ----EGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred ----ccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 3444555556666666665533 2344445566666666665421 1111 3445677777777777765444
No 474
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.24 E-value=1.6e-12 Score=132.87 Aligned_cols=207 Identities=26% Similarity=0.272 Sum_probs=128.5
Q ss_pred CCCCCCCEEEecCCccCCccc-hhhcCCCCCCEEEcccccCccc--CCccccccCCccEEEccCccccccCCcc-ccCCC
Q 040845 218 TNLTDLTTIVLGGNKLNGSIP-ITLGKLQKLQDVDLEYNQLEGS--IPDSICLSVELYELELGGNKLSGSIPAC-FSNMT 293 (824)
Q Consensus 218 ~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~--~~~~~~~~~~L~~L~l~~n~l~~~~~~~-~~~l~ 293 (824)
.++.+|+++.|.++....... .....+++++.||||+|-+... +......+++|+.|+|+.|++....... -..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 356777888888777763221 3556778888888888877632 2234456788888888888876322221 12456
Q ss_pred CCcEEEcCCCCCCC--CCCcccccccccccccccccccCcCCccccccccchhhhcccccccccCC-CccCCCCCCCeEE
Q 040845 294 FLKVLSLGSNELTS--IPLNFWSLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIP-MEIGSLKNLENLF 370 (824)
Q Consensus 294 ~L~~L~L~~N~l~~--lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~ 370 (824)
.|+.|.|+.|.|+. +..-...+|+|+.|+|..|............+..|++|||++|++..... ...+.++.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 78888888888872 22224456788888888885333444455566778888888888764321 3456777888888
Q ss_pred ccCccccccC-Ccc-----ccccccccEEEccCcccCCCCc--ccccCCcccceeeccCCccc
Q 040845 371 LEYNRLEGSI-PDS-----FGDLISLKSLNLSYNNLSGTIP--VSLEKLSYLKDLNLSFNKLK 425 (824)
Q Consensus 371 L~~N~l~~~~-~~~-----~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~ 425 (824)
++.|.++..- |+. -..+++|+.|+++.|++. ..+ ..+..+++|+.|....|.++
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~-~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR-DWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccc-cccccchhhccchhhhhhccccccc
Confidence 8888777432 222 244567777777777775 222 22334445555555555544
No 475
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.23 E-value=1.3e-12 Score=126.70 Aligned_cols=81 Identities=25% Similarity=0.305 Sum_probs=42.7
Q ss_pred CccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcCCCCcCcccccccCCCCCCCc
Q 040845 95 NLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNLTSSTLDLSFLSSLSNCKSLT 174 (824)
Q Consensus 95 ~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~~L~ 174 (824)
.|++||||+|.|+ .+.+...-.++++.|++++|.|..+ +.+..|++|+.||||+|.++.+.. + -.++-+.+
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~~G---w---h~KLGNIK 355 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAECVG---W---HLKLGNIK 355 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHhhhh---h---HhhhcCEe
Confidence 4556666666655 4455555555666666666666532 235556666666666665554321 0 12334555
Q ss_pred EEECcCCCCC
Q 040845 175 HISLSNNPLD 184 (824)
Q Consensus 175 ~L~Ls~n~l~ 184 (824)
+|.|+.|.|.
T Consensus 356 tL~La~N~iE 365 (490)
T KOG1259|consen 356 TLKLAQNKIE 365 (490)
T ss_pred eeehhhhhHh
Confidence 5555555554
No 476
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.22 E-value=4.5e-10 Score=114.84 Aligned_cols=268 Identities=15% Similarity=0.113 Sum_probs=169.4
Q ss_pred CCceeeeccceEEEEEEECCCcEEEEEEeeccccchhhhHHHHHHHHhcC-CCCcceeEEee------e-ecCCeeEEEE
Q 040845 531 ENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSI-RHRNLVKVISS------C-SNEEFKALVL 602 (824)
Q Consensus 531 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~------~-~~~~~~~lv~ 602 (824)
..+.||+|+.+.+|-.-.- +.. +-|++........ .+.++.|... .||-+-.-+.+ . .......+.|
T Consensus 15 ~gr~LgqGgea~ly~l~e~-~d~-VAKIYh~Pppa~~---aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV-RDQ-VAKIYHAPPPAAQ---AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecchh-hch-hheeecCCCchHH---HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 4578999999999965321 223 3466654322211 2233344444 56643321221 1 1223367888
Q ss_pred eccCCC-CHHHHhhh-----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 040845 603 EYMPHG-SLEKYLHS-----SNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 676 (824)
Q Consensus 603 e~~~~g-~L~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 676 (824)
+.+.+. ....+... +-....|...+++++.+|.+.+.|| ..|.+-+|+.++|+|+++++.+.+.|-..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccceee
Confidence 888664 23333221 1135789999999999999999999 99999999999999999999999998653332
Q ss_pred cCCCCCccccccccccccccCccCcC-----CCCCCccchHHHHHHHHHHHHhC-CCCCcccccCcc---hhh-hhhhhh
Q 040845 677 LTGEDQSMTQTQTLATIGYMAPEYGR-----EGQVSTNGDVYSFGIMLMETFTR-KKPTDELFNGEM---TLK-HWVNDC 746 (824)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~tg-~~p~~~~~~~~~---~~~-~~~~~~ 746 (824)
. .........+|...|.+||.-. +-.-+...|.|.+||++++++.| ++||.+...... ... ++....
T Consensus 167 ~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~ 243 (637)
T COG4248 167 N---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGR 243 (637)
T ss_pred c---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcce
Confidence 2 2223344567889999999644 33456788999999999999886 899987542211 111 111110
Q ss_pred CCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccC--CCCCCCHHHHHHHHHHHHHhhcccc
Q 040845 747 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVES--PEQRINAKEIVAKLLKIRDSLLRNV 813 (824)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d--P~~Rpt~~evl~~L~~~~~~~~~~~ 813 (824)
+- ..-+...-..+....+.....++.+..+..+|+... +.-|||++-++..|.++.+++..+.
T Consensus 244 f~----ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~ 308 (637)
T COG4248 244 FA----YASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCT 308 (637)
T ss_pred ee----echhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhh
Confidence 00 000000001111122233355677888999999874 5679999999999999999888754
No 477
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.22 E-value=3.3e-12 Score=120.10 Aligned_cols=142 Identities=23% Similarity=0.244 Sum_probs=43.7
Q ss_pred ccCCcccccccccccCCCCCCEEeCCCCcCCcccChhhh-CcCCCceeeccCCccccccCccccCCCCCccEEEccCCee
Q 040845 28 LYNNRLQGEIIHEIGHLHNLGFLDLSQNKLLGTIPAAIF-NVSTLKAFAVTNNSLSGCLSSITDVGLPNLEVLYLWGNNF 106 (824)
Q Consensus 28 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i 106 (824)
|..+.|+ .++ .+.+..++++|+|++|+|+.+ +.+. .+.+|+.|+|++|.|+.+..- ..+++|+.|++++|+|
T Consensus 4 lt~~~i~-~~~-~~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l~~l---~~L~~L~~L~L~~N~I 76 (175)
T PF14580_consen 4 LTANMIE-QIA-QYNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKLEGL---PGLPRLKTLDLSNNRI 76 (175)
T ss_dssp ------------------------------------S--TT-TT--EEE-TTS--S--TT-------TT--EEE--SS--
T ss_pred ccccccc-ccc-ccccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccccCc---cChhhhhhcccCCCCC
Confidence 4445555 333 344555788888888888743 2344 467788888888887765432 2467777777777777
Q ss_pred eeecCccc-cCCCCCceEeccCccccccC-CccccCCCCCCEEEccCCcCCCCcCcccccccCCCCCCCcEEECc
Q 040845 107 SGTIPHFI-FNASKLSKLALEMNSFSGFI-PSTFGNLRNLEWLTLYDNNLTSSTLDLSFLSSLSNCKSLTHISLS 179 (824)
Q Consensus 107 ~~~~~~~l-~~l~~L~~L~L~~N~i~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~l~~l~~L~~L~Ls 179 (824)
+. +.+.+ ..+++|++|+|++|+|.... -..++.+++|++|+|.+|.++..+.- ....+..+|+|+.||-.
T Consensus 77 ~~-i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~Y--R~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 77 SS-ISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNY--RLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp -S--CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTH--HHHHHHH-TT-SEETTE
T ss_pred Cc-cccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhH--HHHHHHHcChhheeCCE
Confidence 74 33333 35677777777777776432 24556677777777777777643210 11234566777776643
No 478
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.21 E-value=1.1e-10 Score=107.32 Aligned_cols=131 Identities=22% Similarity=0.321 Sum_probs=103.2
Q ss_pred ceeeeccceEEEEEEECCCcEEEEEEeecccc---c-----hhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEEec
Q 040845 533 NLIGRGGFGSVYKARIRDGMEVAVKVFNLQCG---R-----AFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVLEY 604 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 604 (824)
..+++|+-+.+|.+.+. |.++++|.-.+... + ..+.-..|+.++.+++--.|...+=+..+++...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 46889999999999886 55677775322211 1 123456799999999766776666667777888899999
Q ss_pred cCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 040845 605 MPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 676 (824)
Q Consensus 605 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 676 (824)
++|..|.+++... ...++..+-.-+.-|| ..+|+|+|+.++||.+..++ +.++|||++..
T Consensus 81 I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA--------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc--------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999898765 2456778888889999 99999999999999997765 99999999973
No 479
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.20 E-value=2.4e-10 Score=109.78 Aligned_cols=136 Identities=21% Similarity=0.211 Sum_probs=98.9
Q ss_pred CceeeeccceEEEEEEECC-------CcEEEEEEeeccc------------c----------chhhhHH----HHHHHHh
Q 040845 532 NNLIGRGGFGSVYKARIRD-------GMEVAVKVFNLQC------------G----------RAFKSFD----VECAMMK 578 (824)
Q Consensus 532 ~~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~------------~----------~~~~~~~----~E~~~l~ 578 (824)
...||.|--+.||.|...+ +..+|||+.+... + .....+. +|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999997542 4799999875321 0 0112233 7999999
Q ss_pred cCCC--CcceeEEeeeecCCeeEEEEeccCCCCHH-HHhhhCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCCCeEecCCC
Q 040845 579 SIRH--RNLVKVISSCSNEEFKALVLEYMPHGSLE-KYLHSSNYSLDIFQRLNIMIDVASALEYL-HFGYSAPVIHCDLK 654 (824)
Q Consensus 579 ~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~Dlk 654 (824)
++.. -++..++++ ...++||||++++.+. ..+... .++..+...+..+++.++..+ | ..++||||++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~--~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDLs 152 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA--KLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADLS 152 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc--ccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 9853 456666654 3457999999764332 122221 344556677889999999999 8 8999999999
Q ss_pred CCCeeeCCCCcEEEeeccccccc
Q 040845 655 PSNVLLDDNMVAHLSDFGIAKLL 677 (824)
Q Consensus 655 ~~Nill~~~~~~kl~Dfg~a~~~ 677 (824)
+.||+++ ++.+.++|||.|...
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HHHEEEE-CCcEEEEECCCceeC
Confidence 9999997 468999999988754
No 480
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.19 E-value=3.8e-13 Score=133.94 Aligned_cols=89 Identities=21% Similarity=0.207 Sum_probs=51.8
Q ss_pred cccccccccccccccccCc----CCccccccccchhhhcccccccccCCCcc-----CCCCCCCeEEccCccccc----c
Q 040845 313 WSLKDILDLNLSSNCFSGP----LPLEIRNLKALIEIDFSMNNFSGIIPMEI-----GSLKNLENLFLEYNRLEG----S 379 (824)
Q Consensus 313 ~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~----~ 379 (824)
..+++|+.|||.+|-++.. +...++.+++|+.|++++|.+...-..+| ...|+|+.|.|.+|.|+. .
T Consensus 210 ~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~ 289 (382)
T KOG1909|consen 210 EHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALA 289 (382)
T ss_pred HhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHH
Confidence 3344444444444444321 23345555666666666666654322222 235778888888888773 2
Q ss_pred CCccccccccccEEEccCcccC
Q 040845 380 IPDSFGDLISLKSLNLSYNNLS 401 (824)
Q Consensus 380 ~~~~~~~l~~L~~L~L~~N~l~ 401 (824)
+...+...+.|.+|+|++|++.
T Consensus 290 la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 290 LAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHHhcchhhHHhcCCccccc
Confidence 2334555778888888888883
No 481
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.16 E-value=3.3e-10 Score=103.47 Aligned_cols=142 Identities=18% Similarity=0.206 Sum_probs=108.2
Q ss_pred CCceeeeccceEEEEEEECCCcEEEEEEeeccc--------cchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeEEEE
Q 040845 531 ENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQC--------GRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKALVL 602 (824)
Q Consensus 531 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 602 (824)
...++-||+-+.|+++.++ |+...||.-.... .-...+..+|+..+.+++--.|....-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4578999999999999997 8888887532211 112345677999999987666666666676777778999
Q ss_pred eccCC-CCHHHHhhhCCCCCCHHHH-HHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC---cEEEeecccccc
Q 040845 603 EYMPH-GSLEKYLHSSNYSLDIFQR-LNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM---VAHLSDFGIAKL 676 (824)
Q Consensus 603 e~~~~-g~L~~~l~~~~~~~~~~~~-~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~Dfg~a~~ 676 (824)
||+++ .++.+++..........+. ..++..|-+.+.-|| ..+|+|+|+..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99976 4788888765433333333 688999999999999 99999999999999996544 458999999863
No 482
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.11 E-value=6e-10 Score=112.48 Aligned_cols=141 Identities=18% Similarity=0.195 Sum_probs=110.7
Q ss_pred ceeeeccceEEEEEEECCCcEEEEEEeecccc-chhhhHHHHHHHHhcCCCC--cceeEEeeeecC---CeeEEEEeccC
Q 040845 533 NLIGRGGFGSVYKARIRDGMEVAVKVFNLQCG-RAFKSFDVECAMMKSIRHR--NLVKVISSCSNE---EFKALVLEYMP 606 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~---~~~~lv~e~~~ 606 (824)
+.||.|.++.||+++..+|+.+++|....... .....+..|+++++.+++. .+.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999887678999998754322 1356788999999999764 457777777654 26689999999
Q ss_pred CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcC-------------------------------------------
Q 040845 607 HGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFG------------------------------------------- 643 (824)
Q Consensus 607 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~------------------------------------------- 643 (824)
|.++.+.+.. ..++..+...++.++++++++||..
T Consensus 84 G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 84 GRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred CEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 9888776532 2467777888889999999999831
Q ss_pred ----------CCCCeEecCCCCCCeeeCC--CCcEEEeeccccc
Q 040845 644 ----------YSAPVIHCDLKPSNVLLDD--NMVAHLSDFGIAK 675 (824)
Q Consensus 644 ----------~~~~ivH~Dlk~~Nill~~--~~~~kl~Dfg~a~ 675 (824)
....++|+|+++.||+++. ++.+.++||+.+.
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 1256799999999999998 6678999999876
No 483
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.10 E-value=4.8e-11 Score=128.67 Aligned_cols=248 Identities=21% Similarity=0.139 Sum_probs=176.4
Q ss_pred hccCCCCceeeeccceEEEEEEEC--CCcEEEEEEeeccccchhhh--HHHHHHHHhcC-CCCcceeEEeeeecCCeeEE
Q 040845 526 TDKFSENNLIGRGGFGSVYKARIR--DGMEVAVKVFNLQCGRAFKS--FDVECAMMKSI-RHRNLVKVISSCSNEEFKAL 600 (824)
Q Consensus 526 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 600 (824)
..+|..+..||.|.|+.|+....+ ++..|++|...........+ -..|+.+...+ .|.++++....+......|+
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 456888899999999999998643 57889999765443222222 23466666666 58999999888888888889
Q ss_pred EEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC-CcEEEeecccccccCC
Q 040845 601 VLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFGIAKLLTG 679 (824)
Q Consensus 601 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~Dfg~a~~~~~ 679 (824)
--||++++++....... ..++...++++..|++.++.++| ++.++|+|++|+||++..+ +..++.|||.++.+.-
T Consensus 344 p~e~~~~~s~~l~~~~~-~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~ 419 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRSVTS-QMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF 419 (524)
T ss_pred chhhhcCcchhhhhHHH-HhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhccccccccccce
Confidence 99999999887666322 35777889999999999999999 9999999999999999876 8889999999874321
Q ss_pred CCCcccccccccccccc--CccCcCCCCCCccchHHHHHHHHHHHHhCCCCCcccccCcchhhhhhhhhCCCcchhhccc
Q 040845 680 EDQSMTQTQTLATIGYM--APEYGREGQVSTNGDVYSFGIMLMETFTRKKPTDELFNGEMTLKHWVNDCLPISTMEVVDA 757 (824)
Q Consensus 680 ~~~~~~~~~~~~~~~y~--aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (824)
. .....+.-+++ +|+......+..++|++|||.-+.|.+++..--.. ..+|... ..
T Consensus 420 ~-----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~-------~~~~~~i----------~~ 477 (524)
T KOG0601|consen 420 S-----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES-------GVQSLTI----------RS 477 (524)
T ss_pred e-----cccccccccccccchhhccccccccccccccccccccccccCcccCcc-------cccceee----------ec
Confidence 1 11112333444 45555566788999999999999999998753211 0111100 00
Q ss_pred cccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 040845 758 NLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAKEIVAKLLKIR 806 (824)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 806 (824)
............+..+.+.+...++..||.+.+...+.+-.+
T Consensus 478 -------~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 478 -------GDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred -------ccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 000111122245667888899999999999998877665443
No 484
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.05 E-value=7.1e-11 Score=138.75 Aligned_cols=131 Identities=27% Similarity=0.280 Sum_probs=93.5
Q ss_pred cCCCCCcEEEccCCcccccccccccCCCCCCEEeCCCCc--CCcccChhhhCcCCCceeeccCC-ccccccCccccCCCC
Q 040845 18 DNISNLKVLYLYNNRLQGEIIHEIGHLHNLGFLDLSQNK--LLGTIPAAIFNVSTLKAFAVTNN-SLSGCLSSITDVGLP 94 (824)
Q Consensus 18 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~--l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~~l~ 94 (824)
.+....++..+-+|.+. .++.... .++|++|-+..|. +....++.|..++.|+.|||++| .+..+|..+.. |-
T Consensus 520 ~~~~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~--Li 595 (889)
T KOG4658|consen 520 KSWNSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGE--LV 595 (889)
T ss_pred cchhheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhh--hh
Confidence 44456677777777776 4454443 3468888888875 44344444666888888888866 45666666653 77
Q ss_pred CccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCc
Q 040845 95 NLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNN 153 (824)
Q Consensus 95 ~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~ 153 (824)
+|++|+|+++.++ .+|..+.++.+|.+|++..+.-...+|..+..|++|++|.+..-.
T Consensus 596 ~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 596 HLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred hhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 8888888888887 778888888888888888886655667777778888888886654
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.00 E-value=3.3e-10 Score=133.21 Aligned_cols=144 Identities=24% Similarity=0.275 Sum_probs=86.1
Q ss_pred cccccccccCCcccccCCCCCcEEEccCCc--ccccccccccCCCCCCEEeCCCCcCCcccChhhhCcCCCceeeccCCc
Q 040845 3 SIINNFLTSTTPKEIDNISNLKVLYLYNNR--LQGEIIHEIGHLHNLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTNNS 80 (824)
Q Consensus 3 ~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~--l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 80 (824)
++.+|.+..+.-+ .+.++|+.|-+.+|. +.......|..++.|++||||+|.-.+.+|..++++-+|+.|+|++..
T Consensus 529 s~~~~~~~~~~~~--~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~ 606 (889)
T KOG4658|consen 529 SLMNNKIEHIAGS--SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTG 606 (889)
T ss_pred EEeccchhhccCC--CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCC
Confidence 3445555444333 222357777777775 443333446667777777777766555777777777777777777777
Q ss_pred cccccCccccCCCCCccEEEccCCeeeeecCccccCCCCCceEeccCcc--ccccCCccccCCCCCCEEEcc
Q 040845 81 LSGCLSSITDVGLPNLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNS--FSGFIPSTFGNLRNLEWLTLY 150 (824)
Q Consensus 81 l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~--i~~~~~~~~~~l~~L~~L~L~ 150 (824)
++.+|..+.. |..|.+|++..+.-...+|.....+++|++|.+-.-. .+...-..+.+|.+|+.|...
T Consensus 607 I~~LP~~l~~--Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 607 ISHLPSGLGN--LKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSIT 676 (889)
T ss_pred ccccchHHHH--HHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheee
Confidence 7777666553 6677777777766554556666667777777765543 222222334445555555543
No 486
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.97 E-value=1.5e-10 Score=130.97 Aligned_cols=251 Identities=24% Similarity=0.282 Sum_probs=173.2
Q ss_pred HhhccCCCCceeeeccceEEEEEEEC-CCcEEEEEEeecc---ccchhhhHHHHHHHHhcCCCCcceeEEeeeecCCeeE
Q 040845 524 QATDKFSENNLIGRGGFGSVYKARIR-DGMEVAVKVFNLQ---CGRAFKSFDVECAMMKSIRHRNLVKVISSCSNEEFKA 599 (824)
Q Consensus 524 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 599 (824)
...+.+.+.+-+-+|.++.++.++-. .|.-.++|+.... .....+....+-.+.-..++|.+++....+......+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 34566777788889999999988633 2444444443221 1223344444444444455677776666655667788
Q ss_pred EEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 600 LVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 600 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
+|++|+.+++|...++..+ ..+..........+.++.+||| ...+.|+|++|.|.+...++..+++|||.......
T Consensus 881 L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCcccccccccc
Confidence 9999999999999998776 4455556667788889999999 78899999999999999999999999984322110
Q ss_pred ------C---------------CC--------ccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCCCCc
Q 040845 680 ------E---------------DQ--------SMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKKPTD 730 (824)
Q Consensus 680 ------~---------------~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p~~ 730 (824)
. .. ........+|+.|.+||...+......+|.|++|++++|.++|.+||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0 00 011223468999999999999999999999999999999999999998
Q ss_pred ccccCcchhhhhhhhhCCCcchhhccccccCchhhhhhhHHHHHHHHHHHHHHccccCCCCCCCHH
Q 040845 731 ELFNGEMTLKHWVNDCLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLALECTVESPEQRINAK 796 (824)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ 796 (824)
....... .........+. ...+...+....+++...+..+|.+|..|.
T Consensus 1037 a~tpq~~-f~ni~~~~~~~-----------------p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1037 AETPQQI-FENILNRDIPW-----------------PEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred Ccchhhh-hhccccCCCCC-----------------CCCccccChhhhhhhhhhhccCchhccCcc
Confidence 7433221 11111111110 011123345577888899999999998776
No 487
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.92 E-value=2.2e-11 Score=131.62 Aligned_cols=184 Identities=28% Similarity=0.251 Sum_probs=122.0
Q ss_pred chhhcCCCCCCEEEcccccCcccCCccccccCCccEEEccCcc--ccccCCccccC------CCCCcEEEcCCCCCCCCC
Q 040845 238 PITLGKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNK--LSGSIPACFSN------MTFLKVLSLGSNELTSIP 309 (824)
Q Consensus 238 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~--l~~~~~~~~~~------l~~L~~L~L~~N~l~~lp 309 (824)
|..+..+.+|+.|.|.++.|.. ..+...--..|+.|...+.- +..++..+.+. +-.|.+.+.++|.|+.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~-~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~~mD 180 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST-AKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLVLMD 180 (1096)
T ss_pred CceeccccceeeEEecCcchhh-hhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHHhHH
Confidence 4455566677777777776652 11111111234444433211 11111111111 235788889999999888
Q ss_pred CcccccccccccccccccccCcCCccccccccchhhhcccccccccCCCccCCCCCCCeEEccCccccccCCcccccccc
Q 040845 310 LNFWSLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEGSIPDSFGDLIS 389 (824)
Q Consensus 310 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 389 (824)
..+.-++.|+.|||++|+++... .+..++.|++|||+.|.+..+.--.-.++. |+.|++++|.++. +- .+.++.+
T Consensus 181 ~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~t-L~-gie~Lks 255 (1096)
T KOG1859|consen 181 ESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTT-LR-GIENLKS 255 (1096)
T ss_pred HHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHh-hh-hHHhhhh
Confidence 88888899999999999998533 788889999999999999854333334454 9999999999884 32 4778889
Q ss_pred ccEEEccCcccCCCC-cccccCCcccceeeccCCcccCC
Q 040845 390 LKSLNLSYNNLSGTI-PVSLEKLSYLKDLNLSFNKLKGE 427 (824)
Q Consensus 390 L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~ 427 (824)
|+.||+++|-|.+-- -..+..+..|+.|+|.||++.|.
T Consensus 256 L~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 256 LYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred hhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 999999999887421 12245677889999999998764
No 488
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.89 E-value=1.2e-08 Score=97.80 Aligned_cols=125 Identities=26% Similarity=0.306 Sum_probs=82.6
Q ss_pred EEEEEEECCCcEEEEEEeecccc-------------c-------------hhhhHHHHHHHHhcCCCC--cceeEEeeee
Q 040845 542 SVYKARIRDGMEVAVKVFNLQCG-------------R-------------AFKSFDVECAMMKSIRHR--NLVKVISSCS 593 (824)
Q Consensus 542 ~V~~~~~~~~~~vavK~~~~~~~-------------~-------------~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 593 (824)
.||.|...+|..+|||..+.... . ......+|++.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999988899999998754210 0 113466799999999765 466666542
Q ss_pred cCCeeEEEEeccC--CCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHH-hhcCCCCCeEecCCCCCCeeeCCCCcEEEee
Q 040845 594 NEEFKALVLEYMP--HGSLEKYLHSSNYSLDIFQRLNIMIDVASALEY-LHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 670 (824)
Q Consensus 594 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 670 (824)
..++||||++ |..+..+.... ++......++.+++..+.. +| ..|++|||+++.||+++++ .+.++|
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE--
T ss_pred ---CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEEEe
Confidence 2369999998 54554433221 1123455677888885555 58 8999999999999999887 999999
Q ss_pred ccccccc
Q 040845 671 FGIAKLL 677 (824)
Q Consensus 671 fg~a~~~ 677 (824)
||.|...
T Consensus 150 f~qav~~ 156 (188)
T PF01163_consen 150 FGQAVDS 156 (188)
T ss_dssp GTTEEET
T ss_pred cCcceec
Confidence 9998754
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.87 E-value=1.9e-09 Score=83.34 Aligned_cols=61 Identities=39% Similarity=0.568 Sum_probs=41.7
Q ss_pred CCccEEEccCCeeeeecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCcC
Q 040845 94 PNLEVLYLWGNNFSGTIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNNL 154 (824)
Q Consensus 94 ~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i 154 (824)
|+|++|++++|+|+...+..|..+++|++|++++|.++.+.+++|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4566777777777655556666677777777777777766666777777777777776654
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.87 E-value=1.6e-09 Score=83.74 Aligned_cols=61 Identities=38% Similarity=0.464 Sum_probs=46.9
Q ss_pred CCCcEEEccCCcccccccccccCCCCCCEEeCCCCcCCcccChhhhCcCCCceeeccCCcc
Q 040845 21 SNLKVLYLYNNRLQGEIIHEIGHLHNLGFLDLSQNKLLGTIPAAIFNVSTLKAFAVTNNSL 81 (824)
Q Consensus 21 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 81 (824)
++|++|+|++|+|+...+..|.++++|++|++++|+++...|.+|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4678888888888866667778888888888888888776677777777777777777764
No 491
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.87 E-value=2.7e-08 Score=101.49 Aligned_cols=140 Identities=15% Similarity=0.113 Sum_probs=101.8
Q ss_pred ceeeeccceEEEEEEECCCcEEEEEEeeccccc-hh----------hhHHHHHHHHhcCCCCcc--eeEEeeeec-----
Q 040845 533 NLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGR-AF----------KSFDVECAMMKSIRHRNL--VKVISSCSN----- 594 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~----------~~~~~E~~~l~~l~h~ni--v~l~~~~~~----- 594 (824)
+.+-+.....|+++.+. |+.|.||........ .. ..+.+|+..+.++...+| +.++++...
T Consensus 28 e~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 44555555567787775 889999976433211 11 147789999988854443 344555532
Q ss_pred CCeeEEEEeccCCC-CHHHHhhhC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-------CCc
Q 040845 595 EEFKALVLEYMPHG-SLEKYLHSS-NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-------NMV 665 (824)
Q Consensus 595 ~~~~~lv~e~~~~g-~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-------~~~ 665 (824)
....++|||++++. +|.+++... ....+...+..++.+++..++-|| ..||+|+|+++.|||++. ++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCce
Confidence 23567999999875 799988532 224556677889999999999999 999999999999999975 568
Q ss_pred EEEeecccccc
Q 040845 666 AHLSDFGIAKL 676 (824)
Q Consensus 666 ~kl~Dfg~a~~ 676 (824)
+.++||+.+..
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998853
No 492
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.83 E-value=1.1e-10 Score=126.30 Aligned_cols=200 Identities=28% Similarity=0.312 Sum_probs=145.3
Q ss_pred cCCCCCCEEEcccccCcccC-CccccccCCccEEEccCccccccCCccccCC-CCCcEEEcCCCCCCCCC-------Ccc
Q 040845 242 GKLQKLQDVDLEYNQLEGSI-PDSICLSVELYELELGGNKLSGSIPACFSNM-TFLKVLSLGSNELTSIP-------LNF 312 (824)
Q Consensus 242 ~~l~~L~~L~L~~n~l~~~~-~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~L~~N~l~~lp-------~~~ 312 (824)
.-+++++.|.+-+-.=.+.. |-.+..+.+|+.|.+.++.|... ..+..+ ..|++|. .+|.++.+. ..+
T Consensus 81 d~lqkt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LI-C~~Sl~Al~~v~ascggd~ 157 (1096)
T KOG1859|consen 81 DFLQKTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLI-CHNSLDALRHVFASCGGDI 157 (1096)
T ss_pred HHHhhheeeeecccCCCCCCCCceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhh-hhccHHHHHHHHHHhcccc
Confidence 34556666666554443333 66777889999999999998741 112222 2455553 445444331 112
Q ss_pred c---ccccccccccccccccCcCCccccccccchhhhcccccccccCCCccCCCCCCCeEEccCccccccCC-ccccccc
Q 040845 313 W---SLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFLEYNRLEGSIP-DSFGDLI 388 (824)
Q Consensus 313 ~---~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~ 388 (824)
. ....|...+.++|.+. ....++.-++.|+.|+|++|+++.. +.+..|+.|++|||++|.++ .+| -...++.
T Consensus 158 ~ns~~Wn~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~ 233 (1096)
T KOG1859|consen 158 SNSPVWNKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK 233 (1096)
T ss_pred ccchhhhhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh
Confidence 2 2457888999999998 6778888999999999999999976 47899999999999999999 454 3444554
Q ss_pred cccEEEccCcccCCCCcccccCCcccceeeccCCcccCC--CCCCCCccccccccccCCccccCC
Q 040845 389 SLKSLNLSYNNLSGTIPVSLEKLSYLKDLNLSFNKLKGE--IPRGGSFGNFSAESFKGNELLCGS 451 (824)
Q Consensus 389 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~~~~~~~~~~~n~~~c~~ 451 (824)
|+.|.++||.++ .+ ..+.++.+|+.||+++|-|++- ......+..+..+.+.|||.-|..
T Consensus 234 -L~~L~lrnN~l~-tL-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 234 -LQLLNLRNNALT-TL-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred -heeeeecccHHH-hh-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 999999999998 33 3577899999999999999863 333345677788899999977753
No 493
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.77 E-value=4e-08 Score=96.32 Aligned_cols=135 Identities=22% Similarity=0.200 Sum_probs=99.0
Q ss_pred CCCCceeeeccceEEEEEEECCCcEEEEEEeeccc----------------------cchhhhHHHHHHHHhcCCCC--c
Q 040845 529 FSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQC----------------------GRAFKSFDVECAMMKSIRHR--N 584 (824)
Q Consensus 529 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~E~~~l~~l~h~--n 584 (824)
..++..||-|--+.||.|..+.|.++|||.=+... .......++|.++|.+|.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 45678999999999999999899999999532110 01124567899999999654 5
Q ss_pred ceeEEeeeecCCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC
Q 040845 585 LVKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM 664 (824)
Q Consensus 585 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 664 (824)
+.+.+++ +...+||||++|-.|...- ++......++..|++-+.-.- ..||||+|+++-||+++++|
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~dg 239 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEecCC
Confidence 6666654 3346999999986665442 123344455555665555555 67899999999999999999
Q ss_pred cEEEeecccccc
Q 040845 665 VAHLSDFGIAKL 676 (824)
Q Consensus 665 ~~kl~Dfg~a~~ 676 (824)
.+.++||-.+..
T Consensus 240 ~~~vIDwPQ~v~ 251 (304)
T COG0478 240 DIVVIDWPQAVP 251 (304)
T ss_pred CEEEEeCccccc
Confidence 999999987764
No 494
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.76 E-value=3.6e-07 Score=96.67 Aligned_cols=167 Identities=19% Similarity=0.198 Sum_probs=126.6
Q ss_pred cceEEEEEE-ECCCcEEEEEEeeccccchhhhHHHHHHHHhcCCCCcceeEEeeee----cCCeeEEEEeccCC-CCHHH
Q 040845 539 GFGSVYKAR-IRDGMEVAVKVFNLQCGRAFKSFDVECAMMKSIRHRNLVKVISSCS----NEEFKALVLEYMPH-GSLEK 612 (824)
Q Consensus 539 ~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~lv~e~~~~-g~L~~ 612 (824)
-..+.|++. ..||..|++|+++............-+++++++.|.|+|++..++. .+...++||+|.++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 446789996 4579999999995443333333345678999999999999999886 35577899999976 46666
Q ss_pred HhhhC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 040845 613 YLHSS--------------NYSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 678 (824)
Q Consensus 613 ~l~~~--------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 678 (824)
.-... +...++...|.++.|++.||.++| +.|..-+-+.+.+|+++.+.+++|+.-|....+.
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 53211 134677899999999999999999 8999999999999999999899998877776554
Q ss_pred CCCCccccccccccccccCccCcCCCCCCccchHHHHHHHHHHHHhCCC
Q 040845 679 GEDQSMTQTQTLATIGYMAPEYGREGQVSTNGDVYSFGIMLMETFTRKK 727 (824)
Q Consensus 679 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~ 727 (824)
.++. |.+. --.+-|.=.+|.+++.+.||..
T Consensus 445 ~d~~----------------~~le---~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 445 EDPT----------------EPLE---SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCCC----------------cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence 3220 1111 1236799999999999999975
No 495
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.71 E-value=6.5e-10 Score=95.93 Aligned_cols=134 Identities=24% Similarity=0.254 Sum_probs=84.6
Q ss_pred CcEEEcCCCCCCCCCCc---ccccccccccccccccccCcCCccccccccchhhhcccccccccCCCccCCCCCCCeEEc
Q 040845 295 LKVLSLGSNELTSIPLN---FWSLKDILDLNLSSNCFSGPLPLEIRNLKALIEIDFSMNNFSGIIPMEIGSLKNLENLFL 371 (824)
Q Consensus 295 L~~L~L~~N~l~~lp~~---~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 371 (824)
+..++|+.++|..++.. +.....|+..+|++|.+....+..-..++.++.|+|++|.|+ .+|.++..++.|+.|++
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl 107 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNL 107 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhccc
Confidence 33444455544444333 223344444555555555333333344557777888888887 45666888888888888
Q ss_pred cCccccccCCccccccccccEEEccCcccCCCCcccccCCcccceeeccCCcccCCCCCC
Q 040845 372 EYNRLEGSIPDSFGDLISLKSLNLSYNNLSGTIPVSLEKLSYLKDLNLSFNKLKGEIPRG 431 (824)
Q Consensus 372 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 431 (824)
+.|.+. ..|..+..+.+|-.||..+|.+. .+|..+-.-.......+.+++|.+..+..
T Consensus 108 ~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~k 165 (177)
T KOG4579|consen 108 RFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKK 165 (177)
T ss_pred ccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCccc
Confidence 888887 67777777888888888888876 66655443344455556777887777764
No 496
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.66 E-value=4.5e-09 Score=102.62 Aligned_cols=61 Identities=31% Similarity=0.405 Sum_probs=26.5
Q ss_pred CCCCEEeCCCCcCCc--ccChhhhCcCCCceeeccCCccccccCccccCCCCCccEEEccCCee
Q 040845 45 HNLGFLDLSQNKLLG--TIPAAIFNVSTLKAFAVTNNSLSGCLSSITDVGLPNLEVLYLWGNNF 106 (824)
Q Consensus 45 ~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i 106 (824)
+.++.|||.+|+|+. ++..-+.+++.|++|+|+.|++...+.... ..+.+|+.|-|.|..+
T Consensus 71 ~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp-~p~~nl~~lVLNgT~L 133 (418)
T KOG2982|consen 71 TDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLP-LPLKNLRVLVLNGTGL 133 (418)
T ss_pred hhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCc-ccccceEEEEEcCCCC
Confidence 445555555555542 222333444555555555554444333322 1233444444444433
No 497
>PRK09902 hypothetical protein; Provisional
Probab=98.65 E-value=3.9e-07 Score=87.67 Aligned_cols=154 Identities=17% Similarity=0.133 Sum_probs=109.7
Q ss_pred HHHHHHhhccCCCCceeeeccceEEEEEEECCCcEEEEEEeeccc------cchhhhHHHHHHHHhcCCCCc--ceeEEe
Q 040845 519 YLELFQATDKFSENNLIGRGGFGSVYKARIRDGMEVAVKVFNLQC------GRAFKSFDVECAMMKSIRHRN--LVKVIS 590 (824)
Q Consensus 519 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~n--iv~l~~ 590 (824)
|+.+.....++-..-=-|+||.+.|++.... |..+-+|+-.... ......|.+|+..+..+...+ +.+++.
T Consensus 10 f~~~w~~~~~wve~pN~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf 88 (216)
T PRK09902 10 FNHWWATEGDWVEEPNYRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVF 88 (216)
T ss_pred HHHHHhCCCceecCCCcCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccce
Confidence 3344444444433334577999999998876 5578888754221 223568999999999985333 444442
Q ss_pred eeec----CCeeEEEEeccCC-CCHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC
Q 040845 591 SCSN----EEFKALVLEYMPH-GSLEKYLHSSN-YSLDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM 664 (824)
Q Consensus 591 ~~~~----~~~~~lv~e~~~~-g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 664 (824)
+... ....+||+|-+++ .+|.+++.... ...+......+..+++..++-|| +.|+.|+|+.+.||+++.++
T Consensus 89 ~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g 165 (216)
T PRK09902 89 GEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEG 165 (216)
T ss_pred eeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCC
Confidence 2111 2345799998853 48999886543 34577778899999999999999 99999999999999998666
Q ss_pred c--EEEeecccccc
Q 040845 665 V--AHLSDFGIAKL 676 (824)
Q Consensus 665 ~--~kl~Dfg~a~~ 676 (824)
. ++++||.-++.
T Consensus 166 ~~~v~lIDlEk~r~ 179 (216)
T PRK09902 166 KAEAGFLDLEKSRR 179 (216)
T ss_pred CeeEEEEEhhccch
Confidence 6 99999987653
No 498
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.63 E-value=6.4e-09 Score=101.56 Aligned_cols=87 Identities=25% Similarity=0.318 Sum_probs=47.7
Q ss_pred CCCCCEEEecCCccCC--ccchhhcCCCCCCEEEcccccCcccCCccccccCCccEEEccCccccc-cCCccccCCCCCc
Q 040845 220 LTDLTTIVLGGNKLNG--SIPITLGKLQKLQDVDLEYNQLEGSIPDSICLSVELYELELGGNKLSG-SIPACFSNMTFLK 296 (824)
Q Consensus 220 l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~ 296 (824)
++.++++||.+|.|+. .+...+.++|.|++|+|++|++...+...-....+|+.|.|.+..+.- .....+..+|.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 4556666666666652 122234466677777777776663222111345567777777666652 1223445566667
Q ss_pred EEEcCCCCCC
Q 040845 297 VLSLGSNELT 306 (824)
Q Consensus 297 ~L~L~~N~l~ 306 (824)
.|.++.|.++
T Consensus 150 elHmS~N~~r 159 (418)
T KOG2982|consen 150 ELHMSDNSLR 159 (418)
T ss_pred hhhhccchhh
Confidence 7777666544
No 499
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.60 E-value=2.1e-07 Score=102.87 Aligned_cols=141 Identities=22% Similarity=0.235 Sum_probs=95.4
Q ss_pred ceeeeccceEEEEEEECCCcEEEEEEeeccccch------------------------------h----------hhHHH
Q 040845 533 NLIGRGGFGSVYKARIRDGMEVAVKVFNLQCGRA------------------------------F----------KSFDV 572 (824)
Q Consensus 533 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------------------------------~----------~~~~~ 572 (824)
..|+.++-|.||+|++++|+.||||+.++.-.+. . -++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 6899999999999999999999999976431100 0 12345
Q ss_pred HHHHHhcCC----CCcceeEEeee-ecCCeeEEEEeccCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHH-HHhhcCCCC
Q 040845 573 ECAMMKSIR----HRNLVKVISSC-SNEEFKALVLEYMPHGSLEKYLHSSNYSLDIFQRLNIMIDVASAL-EYLHFGYSA 646 (824)
Q Consensus 573 E~~~l~~l~----h~niv~l~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l-~~LH~~~~~ 646 (824)
|+.-+.+++ ..--+.+-.++ +-.....++|||++|-.+.+...-.....+... ++..++++. ..+- ..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~---ia~~~~~~f~~q~~---~d 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKE---LAELLVRAFLRQLL---RD 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHH---HHHHHHHHHHHHHH---hc
Confidence 665555553 22223333333 334566899999999988888433223455333 333333321 1222 46
Q ss_pred CeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 040845 647 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 679 (824)
Q Consensus 647 ~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 679 (824)
|++|+|.+|.||+++.+|.+.+.|||+...+.+
T Consensus 285 gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 285 GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 899999999999999999999999999987654
No 500
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.57 E-value=9.7e-10 Score=107.18 Aligned_cols=179 Identities=22% Similarity=0.202 Sum_probs=126.1
Q ss_pred CccEEEccCCeeee-ecCccccCCCCCceEeccCccccccCCccccCCCCCCEEEccCCc-CCCCcCcccccccCCCCCC
Q 040845 95 NLEVLYLWGNNFSG-TIPHFIFNASKLSKLALEMNSFSGFIPSTFGNLRNLEWLTLYDNN-LTSSTLDLSFLSSLSNCKS 172 (824)
Q Consensus 95 ~L~~L~L~~n~i~~-~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~~~l~~l~~ 172 (824)
.|++||||...|+. .+-..+..+++|+.|.|.++++++-+...+++-.+|+.|+|+.+. +++.... --+.+++.
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~----ll~~scs~ 261 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQ----LLLSSCSR 261 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHH----HHHHhhhh
Confidence 59999999999873 244567778999999999999998888889999999999999764 4443322 13678999
Q ss_pred CcEEECcCCCCCccCCccccccccccccEEEeecCcce---ecCCccCCCCCCCCEEEecCCc-cCCccchhhcCCCCCC
Q 040845 173 LTHISLSNNPLDGILPRTYVGNLSHSLKNFYMYNCNVS---GGIPEEITNLTDLTTIVLGGNK-LNGSIPITLGKLQKLQ 248 (824)
Q Consensus 173 L~~L~Ls~n~l~~~~~~~~~~~l~~~L~~L~l~~n~l~---~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~ 248 (824)
|.+|+|++|.+....-...+.....+|+.|+|+|+.=. ..+..-...+++|..|||++|. ++......|..++.|+
T Consensus 262 L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~ 341 (419)
T KOG2120|consen 262 LDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQ 341 (419)
T ss_pred HhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchhe
Confidence 99999999998766555566677788888888887421 1112223467888888888763 4444445667778888
Q ss_pred EEEcccccCcccCCccc---cccCCccEEEccCc
Q 040845 249 DVDLEYNQLEGSIPDSI---CLSVELYELELGGN 279 (824)
Q Consensus 249 ~L~L~~n~l~~~~~~~~---~~~~~L~~L~l~~n 279 (824)
+|.|+.|.. ++|..+ ...++|.+|++.++
T Consensus 342 ~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 342 HLSLSRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred eeehhhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 888887764 344432 33445555555543
Done!