BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040846
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8TQV6|MSRA_METAC Peptide methionine sulfoxide reductase MsrA OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=msrA PE=3 SV=1
Length = 188
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 87/140 (62%), Gaps = 3/140 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E AF ++ GV+ TA GY GG +KPTY +VC TGH EAV+V +D + +SYK+L
Sbjct: 38 FWGIEEAFRQVKGVVATAVGYSGGHFEKPTYEQVCTLDTGHAEAVRVIFDPKVVSYKNLL 97
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESK--IRRQMKLNKRIVTKII 119
D+FW+ HDPT +N + +S I+Y NEE++ A SK + + IVT+I+
Sbjct: 98 DVFWKIHDPTTKNRQGPDVGKQYRSVIFYHNEEQKAAALASKEELEKAGVFKNPIVTEIV 157
Query: 120 QFDSEFCMAENQFQKYYLQK 139
SEF MAE+ Q+Y+ +K
Sbjct: 158 PV-SEFYMAEDYHQQYFEKK 176
>sp|Q8PUD6|MSRA_METMA Peptide methionine sulfoxide reductase MsrA OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=msrA PE=3 SV=1
Length = 211
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 87/140 (62%), Gaps = 3/140 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E AF ++ GV+ TA GY GG K+PTY +VC TGH EAV+V +D + +SYK+L
Sbjct: 61 FWGIEEAFRQIKGVVATAVGYSGGHFKRPTYEQVCTLDTGHAEAVRVIFDPEIVSYKTLL 120
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESK--IRRQMKLNKRIVTKII 119
D+FW+ HDPT ++ + +S I+Y ++E++ A SK + + +VT+I+
Sbjct: 121 DVFWKIHDPTTKDRQGPDVGKQYRSVIFYHSDEQKAAALASKEELEKSGAFKNPVVTEIV 180
Query: 120 QFDSEFCMAENQFQKYYLQK 139
SEF MAE+ Q+Y+ +K
Sbjct: 181 PV-SEFYMAEDYHQQYFEKK 199
>sp|A3CUG3|MSRA_METMJ Peptide methionine sulfoxide reductase MsrA OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=msrA
PE=3 SV=1
Length = 164
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 3/148 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E AF R+ GV+ TA G+ GGT++ PTY EVC G TGH E V+V YD T+SY++L
Sbjct: 17 FWGVEEAFRRVPGVVETAVGFMGGTVENPTYPEVCTGRTGHAEVVQVTYDPGTVSYRALL 76
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESK--IRRQMKLNKRIVTKII 119
D FW+ HDPT N + T +S I+ E+ +A+ SK + + K + IVT I
Sbjct: 77 DTFWDAHDPTTPNRQGPDIGTQYRSVIFVHTPEQEAEARASKEEMDQSGKFRRPIVTA-I 135
Query: 120 QFDSEFCMAENQFQKYYLQKCCRLCESL 147
+ F AE Q+Y+ ++ C ++
Sbjct: 136 EPAGTFWRAEEYHQQYFAKRGGGQCRTV 163
>sp|P54150|MSRA4_ARATH Peptide methionine sulfoxide reductase A4, chloroplastic
OS=Arabidopsis thaliana GN=MSR4 PE=1 SV=2
Length = 258
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E A+ R+ GV +T GY G + P+Y +VC G TGH E V+V YD + S++SL
Sbjct: 101 FWGVELAYQRVPGVTKTEVGYSHGIVHNPSYEDVCTGTTGHNEVVRVQYDPKECSFESLL 160
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQF 121
D+FW HDPT N + T +S IYY +E+ + A+E+ ++Q LNKRIVT+I+
Sbjct: 161 DVFWNRHDPTTLNRQGGDVGTQYRSGIYYYTDEQERIAREAVEKQQKILNKRIVTEILP- 219
Query: 122 DSEFCMAENQFQKYYLQKCCRL 143
++F AEN Q+ YL K R+
Sbjct: 220 ATKFYRAENYHQQ-YLAKGGRM 240
>sp|Q12TP4|MSRA_METBU Peptide methionine sulfoxide reductase MsrA OS=Methanococcoides
burtonii (strain DSM 6242) GN=msrA PE=3 SV=1
Length = 153
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 85/137 (62%), Gaps = 3/137 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E+AF ++ GV+ T GY GGTLK PTY++V G TGH E++ + +D+ I+Y L
Sbjct: 11 FWGVEAAFSKVEGVISTKVGYTGGTLKDPTYKDVSTGSTGHAESIDIIFDESVITYGELL 70
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESK--IRRQMKLNKRIVTKII 119
++ W THDPT ++ + +SAI+Y ++ +R+ A S+ + R K + I T+I+
Sbjct: 71 EVLWNTHDPTTKDSQGPDHGSQYRSAIFYHDDAQREAALRSREQLERSGKYDSTIKTEIV 130
Query: 120 QFDSEFCMAENQFQKYY 136
+ SEF AE+ QKY+
Sbjct: 131 KA-SEFSPAEDYHQKYF 146
>sp|P54151|MSRA_BRANA Peptide methionine sulfoxide reductase OS=Brassica napus GN=PMSR
PE=2 SV=1
Length = 257
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F E A+ R+ GV +T GY G + PTY +VC TGH E V+V YD + +S++SL
Sbjct: 100 FWGAELAYQRVPGVTKTEVGYSHGFVDNPTYEDVCSETTGHNEIVRVQYDPKEVSFESLL 159
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQF 121
D+FW+ HDPT N + T +S IY+ +E+ K A+E+ ++Q LN++IVT+I+
Sbjct: 160 DVFWKRHDPTTLNRQGNDVGTRYRSGIYFYTDEQEKLAREAMEKQQKILNRKIVTEILP- 218
Query: 122 DSEFCMAENQFQKYYLQKCCRLCESLS 148
++F AEN Q+ YL K R+ S S
Sbjct: 219 ATKFYRAENYHQQ-YLAKGGRMGLSQS 244
>sp|Q9SEC2|MSRA_LACSA Peptide methionine sulfoxide reductase OS=Lactuca sativa PE=2 SV=1
Length = 259
Score = 113 bits (282), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E AF R+ GV +T GY G L PTY ++C G T H+E V+V YD + S+ SL
Sbjct: 102 FWGVELAFQRVPGVSKTEVGYTQGFLHNPTYNDICSGTTNHSEVVRVQYDPKACSFDSLL 161
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQF 121
D FWE HDPT N + T +S IY+ E+ K A E+K R Q KLN+ +VT+I+
Sbjct: 162 DCFWERHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAIEAKERHQKKLNRTVVTEILP- 220
Query: 122 DSEFCMAENQFQKYYLQKCCRL 143
+F AE ++ + YL K R
Sbjct: 221 AKKFYRAE-EYHQQYLAKGGRF 241
>sp|Q6LYY1|MSRA_METMP Peptide methionine sulfoxide reductase MsrA OS=Methanococcus
maripaludis (strain S2 / LL) GN=msrA PE=3 SV=1
Length = 157
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F E F ++NGV+ T G+ GGT+K PTY +VC G +GH E VK+ YD + ISY L
Sbjct: 14 FWGAEEVFRKINGVVSTEVGFMGGTIKNPTYGQVCRGKSGHIEVVKIDYDPEIISYDELL 73
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQF 121
D+FW H+PT N + + S I+Y ++E++ A++S + Q + +IVT II+
Sbjct: 74 DLFWNNHNPTTPNKQGWDVGEQYSSYIFYFDDEQKLIAEKSLEKMQENTDLKIVT-IIEK 132
Query: 122 DSEFCMAENQFQKYYLQK 139
F AE QKY+++K
Sbjct: 133 AGSFYPAEEYHQKYFMKK 150
>sp|O26635|MSRA_METTH Peptide methionine sulfoxide reductase MsrA OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=msrA PE=3 SV=1
Length = 169
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E AF +++GV+ T GY GG L+ PTY +VC G+TGH E V+V +D + Y L
Sbjct: 17 FWGVEDAFRKVDGVVSTRVGYMGGHLENPTYEDVCTGLTGHAEVVEVTFDPDVVGYSDLL 76
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQ--MKLNKRIVTKII 119
D+FW HDPT N + +S I+Y ++E+R+ A ES+ R + + RIVT I
Sbjct: 77 DVFWSIHDPTTLNRQGPDVGEQYRSVIFYHSDEQRRAAIESRRRLEESGRFRDRIVTA-I 135
Query: 120 QFDSEFCMAENQFQKYYLQKCCRLCESLSLRST 152
+ F AE Q+Y + R C + L ST
Sbjct: 136 EPAGTFYEAEEYHQQYLEKNPRRRCYLMRLLST 168
>sp|Q9LY14|MSRA3_ARATH Peptide methionine sulfoxide reductase A3 OS=Arabidopsis thaliana
GN=MSRA3 PE=1 SV=1
Length = 202
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E AF R+ GV +T GY GT+ P+Y +VC G TGH+E V+V YD +Y+SL
Sbjct: 45 FWGVELAFQRVPGVTQTEAGYTQGTVDNPSYGDVCSGTTGHSEVVRVQYDLNDCTYESLL 104
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQF 121
D+FW HDPT N + T +S IY+ E+ K A+ES R Q ++ ++I+T+I+
Sbjct: 105 DLFWSRHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKLARESLERHQQQMERKIMTEILPA 164
Query: 122 DSEFCMAENQFQKYYLQKCCRLCESLS 148
+F AE Q+ YL K R + S
Sbjct: 165 -KKFYRAEEHHQQ-YLSKGGRFGQGQS 189
>sp|B4TT49|MSRA_SALSV Peptide methionine sulfoxide reductase MsrA OS=Salmonella
schwarzengrund (strain CVM19633) GN=msrA PE=3 SV=1
Length = 212
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD I Y+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
IFWE HDPT T +SAIY E+ A S+ R Q + N R +T
Sbjct: 113 QIFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQSAAAHASRERFQSAMAAAGNHRPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EITHATPFYYAEDEHQQY 190
>sp|Q9FKF7|MSRA1_ARATH Peptide methionine sulfoxide reductase A1 OS=Arabidopsis thaliana
GN=MSRA1 PE=2 SV=1
Length = 202
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E A+ R+ GV +T GY G P+Y++VC G T H E V+V YD + SY+SL
Sbjct: 45 FWSVELAYQRVPGVTQTEVGYSQGITHDPSYKDVCSGTTNHAEIVRVQYDPKECSYQSLL 104
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQF 121
D+FW HDPT N + T +S IY+ N E+ K A+ES R Q ++++++VT+I+
Sbjct: 105 DLFWSKHDPTTLNRQGNDVGTQYRSGIYFYNPEQEKLARESLERHQQQVDRKVVTEILPA 164
Query: 122 DSEFCMAENQFQKYYLQKCCRL 143
+F AE Q+ YL K R
Sbjct: 165 -KKFYRAEEHHQQ-YLSKGGRF 184
>sp|A6VFD6|MSRA_METM7 Peptide methionine sulfoxide reductase MsrA OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=msrA PE=3
SV=1
Length = 157
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F E F ++GV+ T GY GG +K PTY +VC G +GH E VKV YD + I+Y L
Sbjct: 14 FWSAEELFRHVDGVISTEVGYMGGNVKNPTYGQVCRGKSGHIEVVKVSYDSKIITYDDLL 73
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQF 121
++FW+ HDPT N + + S I+Y +E+R A++S + Q ++ +IVT I +
Sbjct: 74 ELFWKNHDPTTPNRQGWDVGEQYSSHIFYFTDEQRIVAEKSLEKMQCYMDLKIVTAIKK- 132
Query: 122 DSEFCMAENQFQKYYLQK 139
S+F AE QKY+++K
Sbjct: 133 ASDFFPAEEYHQKYFMKK 150
>sp|B5Y2Y3|MSRA_KLEP3 Peptide methionine sulfoxide reductase MsrA OS=Klebsiella
pneumoniae (strain 342) GN=msrA PE=3 SV=1
Length = 211
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV+V YD Q ISY+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGQTGHAEAVRVVYDPQVISYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNK----RIVTK 117
+FWE HDP T +SAIY E+ A+ S R Q +N R +T
Sbjct: 113 QVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQTAAAKASLARFQAAMNDAHDTRHITT 172
Query: 118 IIQFDSEFCMAENQFQKYYLQKCCRLC 144
I F AE+ Q+Y + C
Sbjct: 173 EIATAKPFYYAEDDHQQYLYKNPHGYC 199
>sp|Q8ZK71|MSRA_SALTY Peptide methionine sulfoxide reductase MsrA OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=msrA PE=3 SV=1
Length = 212
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD ISY+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVISYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
FWE HDPT T +SAIY E+ A S+ R Q + + R +T
Sbjct: 113 QTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMTAAGDHRPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EIAHATPFYYAEDEHQQY 190
>sp|B4T3H1|MSRA_SALNS Peptide methionine sulfoxide reductase MsrA OS=Salmonella newport
(strain SL254) GN=msrA PE=3 SV=1
Length = 212
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD ISY+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVISYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
FWE HDPT T +SAIY E+ A S+ R Q + + R +T
Sbjct: 113 QTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMTAAGDHRPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EIAHATPFYYAEDEHQQY 190
>sp|A9MEZ2|MSRA_SALAR Peptide methionine sulfoxide reductase MsrA OS=Salmonella arizonae
(strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=msrA PE=3
SV=1
Length = 212
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV+V YD ISY+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRVVYDPAVISYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
+FWE HDP T +SAIY E+ A S+ R Q + ++R +T
Sbjct: 113 QVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQSTAAHASRERFQSAMADAGDERPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EIAHATPFYYAEDEHQQY 190
>sp|Q9CN40|MSRA_PASMU Peptide methionine sulfoxide reductase MsrA OS=Pasteurella
multocida (strain Pm70) GN=msrA PE=3 SV=1
Length = 174
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 90/161 (55%), Gaps = 6/161 (3%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E+ F ++ GV + +GY GT + PTY+EVC G TGH EAVKV +D ISY+ L
Sbjct: 12 FWCVEAVFNQIKGVEKATSGYINGTTENPTYKEVCTGETGHAEAVKVEFDATVISYEKLL 71
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQF 121
DIF+ H+PT N+ + T ++ IYY N+E+ + A + Q ++IVT+++
Sbjct: 72 DIFFSIHNPTQLNHQGEDVGTQYRTGIYYLNDEQEQLANKKIAELQPHFAEKIVTEVLPA 131
Query: 122 DSEFCMAENQFQKYYLQK-----CCRLCESLSLRSTVQFVE 157
+ F AE+ Q Y LQ C + L++ V+F E
Sbjct: 132 QT-FYPAEDYHQGYLLQNPQNSYCNLVATPKFLKAKVKFEE 171
>sp|A9N540|MSRA_SALPB Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=msrA PE=3 SV=1
Length = 212
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD ISY+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVISYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
IFWE HDPT T +SAIY E+ A S R Q + + R +T
Sbjct: 113 QIFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASCERFQSAMAAAGDHRPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EIAHATPFYYAEDEHQQY 190
>sp|Q7XUP7|MSR21_ORYSJ Peptide methionine sulfoxide reductase A2-1 OS=Oryza sativa subsp.
japonica GN=MSRA2-1 PE=2 SV=2
Length = 187
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E + RL GV RT GY G +PTYR+VC G TGH E V+V YD + Y+ L
Sbjct: 35 FWSVELTYQRLPGVARTEVGYSQGHRHEPTYRDVCGGGTGHAEVVRVHYDPKACPYEVLL 94
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQF 121
D+FW H+PT N + T +S IYY E+ K A++S +Q + +RIVT+I+
Sbjct: 95 DVFWAKHNPTTLNRQGNDVGTQYRSGIYYYTAEQEKAARDSLAEKQKEWKERIVTEILPA 154
Query: 122 DSEFCMAENQFQKY 135
+ F AE Q+Y
Sbjct: 155 -TRFYPAEEYHQRY 167
>sp|Q336R9|MSRA4_ORYSJ Peptide methionine sulfoxide reductase A4, chloroplastic OS=Oryza
sativa subsp. japonica GN=MSRA4 PE=2 SV=2
Length = 263
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 77/142 (54%), Gaps = 2/142 (1%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E AF R+ GV RT GY G L PTY +VC G T H E V+V YD + L
Sbjct: 106 FWGVELAFQRVPGVTRTEVGYSQGNLHDPTYEDVCTGATYHNEVVRVHYDVSACKFDDLL 165
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQF 121
D+FW HDPT N + T +S IYY E+ K A+ES ++Q LN+ IVT+I+
Sbjct: 166 DVFWARHDPTTPNRQGNDVGTQYRSGIYYYTPEQEKAARESLEKQQKLLNRTIVTEILP- 224
Query: 122 DSEFCMAENQFQKYYLQKCCRL 143
F AE ++ + YL K R
Sbjct: 225 AKRFYRAE-EYHQQYLAKGGRF 245
>sp|B5F3D4|MSRA_SALA4 Peptide methionine sulfoxide reductase MsrA OS=Salmonella agona
(strain SL483) GN=msrA PE=3 SV=1
Length = 212
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD I Y+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
FWE HDPT T +SAIY E+ A S+ R Q + + R +T
Sbjct: 113 QTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQAAMAAAGDHRPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EIAHATPFYYAEDEHQQY 190
>sp|B7LMP0|MSRA_ESCF3 Peptide methionine sulfoxide reductase MsrA OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=msrA PE=3 SV=1
Length = 212
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD ISY+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGETGHAEAVRIVYDPSVISYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
+FWE HDP T +SAIY E+ A+ S+ R Q + + R VT
Sbjct: 113 QVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDSAARASRERFQAAMIAANDDRPVTT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE+ Q+Y
Sbjct: 173 EIANATPFYYAEDDHQQY 190
>sp|Q551H3|MSRA_DICDI Peptide methionine sulfoxide reductase OS=Dictyostelium discoideum
GN=msrA PE=3 SV=1
Length = 147
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F R+ GV +T GY GT++ PTYR+VC G TG EAV++ YD + ++Y L
Sbjct: 11 FWSVELLFQRVAGVTKTRVGYTNGTVENPTYRQVCSGKTGCAEAVELEYDPEKVTYNQLL 70
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQF 121
+FW HDPT N + T +S IYY NEE++ +A SK + Q+K I T+I+
Sbjct: 71 GLFWSKHDPTTLNRQGNDVGTQYRSGIYYHNEEQKNEAIASKEKEQLKYKDPISTEILPA 130
Query: 122 DSEFCMAENQFQKY 135
F AE + Q+Y
Sbjct: 131 GV-FYPAETEHQQY 143
>sp|A8G8X6|MSRA_SERP5 Peptide methionine sulfoxide reductase MsrA OS=Serratia
proteamaculans (strain 568) GN=msrA PE=3 SV=1
Length = 213
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F + GV TA GY GG PTYREVC G TGHTE V+V +D + ISYK L
Sbjct: 54 FWGVERLFWQQQGVYSTAAGYSGGYTPNPTYREVCSGQTGHTEVVRVVFDPKIISYKQLL 113
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
+FWE HDP + T +SAIY E++ +A+ S R Q + +KR +T
Sbjct: 114 QVFWENHDPAQGMRQGGDVGTQYRSAIYTLTPEQQTEAESSLQRFQQAMEQAGDKRAITT 173
Query: 118 IIQFDSEFCMAENQFQKY 135
+ F AE+ Q+Y
Sbjct: 174 EVAPALPFYYAEDDHQQY 191
>sp|Q8Z150|MSRA_SALTI Peptide methionine sulfoxide reductase MsrA OS=Salmonella typhi
GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD I Y+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
FWE HDPT T +SAIY E+ A S+ R Q + + R +T
Sbjct: 113 QTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMAAAGDHRPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EIAHATPFYYAEDEHQQY 190
>sp|B5BKM8|MSRA_SALPK Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
A (strain AKU_12601) GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD I Y+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
FWE HDPT T +SAIY E+ A S+ R Q + + R +T
Sbjct: 113 QTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMAAAGDHRPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EIAHATPFYYAEDEHQQY 190
>sp|C0Q6H8|MSRA_SALPC Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
C (strain RKS4594) GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD I Y+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
FWE HDPT T +SAIY E+ A S+ R Q + + R +T
Sbjct: 113 QTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMAAAGDHRPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EIAHATPFYYAEDEHQQY 190
>sp|Q5PJ81|MSRA_SALPA Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
A (strain ATCC 9150 / SARB42) GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD I Y+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
FWE HDPT T +SAIY E+ A S+ R Q + + R +T
Sbjct: 113 QTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMAAAGDHRPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EIAHATPFYYAEDEHQQY 190
>sp|B4TFF2|MSRA_SALHS Peptide methionine sulfoxide reductase MsrA OS=Salmonella
heidelberg (strain SL476) GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD I Y+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
FWE HDPT T +SAIY E+ A S+ R Q + + R +T
Sbjct: 113 QTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMAAAGDHRPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EIAHATPFYYAEDEHQQY 190
>sp|B5R9G7|MSRA_SALG2 Peptide methionine sulfoxide reductase MsrA OS=Salmonella
gallinarum (strain 287/91 / NCTC 13346) GN=msrA PE=3
SV=1
Length = 212
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD I Y+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
FWE HDPT T +SAIY E+ A S+ R Q + + R +T
Sbjct: 113 QTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMAAAGDHRPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EIAHATPFYYAEDEHQQY 190
>sp|B5R0T7|MSRA_SALEP Peptide methionine sulfoxide reductase MsrA OS=Salmonella
enteritidis PT4 (strain P125109) GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD I Y+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
FWE HDPT T +SAIY E+ A S+ R Q + + R +T
Sbjct: 113 QTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMAAAGDHRPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EIAHATPFYYAEDEHQQY 190
>sp|B5FSB9|MSRA_SALDC Peptide methionine sulfoxide reductase MsrA OS=Salmonella dublin
(strain CT_02021853) GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD I Y+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
FWE HDPT T +SAIY E+ A S+ R Q + + R +T
Sbjct: 113 QTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMAAAGDHRPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EIAHATPFYYAEDEHQQY 190
>sp|Q0T9G6|MSRA_ECOL5 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD ISY+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL-----NKRIVT 116
+FWE HDP ST +SAIY E+ A+ S R Q + ++RI T
Sbjct: 113 QVFWENHDPAQGMRQGNDHSTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRRITT 172
Query: 117 KIIQFDSEFCMAENQFQKY 135
+I + F AE+ Q+Y
Sbjct: 173 EIANA-TPFYYAEDDHQQY 190
>sp|B2TZL3|MSRA_SHIB3 Peptide methionine sulfoxide reductase MsrA OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=msrA PE=3
SV=1
Length = 212
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +ES F +L GV TA GY GG PTYREVC G TGH EAV++ YD ISY+ L
Sbjct: 53 FWGVESLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
+FWE HDP T +SAIY E+ A+ S R Q + + R +T
Sbjct: 113 QVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE+ Q+Y
Sbjct: 173 EIANATPFYYAEDDHQQY 190
>sp|Q57GH3|MSRA_SALCH Peptide methionine sulfoxide reductase MsrA OS=Salmonella
choleraesuis (strain SC-B67) GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD I Y+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
FWE HDPT T +SAIY E+ A S+ R Q + + R +T
Sbjct: 113 QTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMAAAGDHRPITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I + F AE++ Q+Y
Sbjct: 173 EIAHATPFYYAEDEHQQY 190
>sp|B1JML1|MSRA_YERPY Peptide methionine sulfoxide reductase MsrA OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=msrA
PE=3 SV=1
Length = 212
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F E F + GV TA GY GG PTY EVC G TGH E V+V +D ISY+ L
Sbjct: 53 FWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNK----RIVTK 117
IFWE HDP + T +SAIY E+ +QA +S+ R Q + K R++T
Sbjct: 113 QIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITS 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I F AE+ Q+Y
Sbjct: 173 EITVALPFYYAEDDHQQY 190
>sp|Q66F89|MSRA_YERPS Peptide methionine sulfoxide reductase MsrA OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=msrA
PE=3 SV=1
Length = 212
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F E F + GV TA GY GG PTY EVC G TGH E V+V +D ISY+ L
Sbjct: 53 FWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNK----RIVTK 117
IFWE HDP + T +SAIY E+ +QA +S+ R Q + K R++T
Sbjct: 113 QIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITS 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I F AE+ Q+Y
Sbjct: 173 EITVALPFYYAEDDHQQY 190
>sp|A4TRL2|MSRA_YERPP Peptide methionine sulfoxide reductase MsrA OS=Yersinia pestis
(strain Pestoides F) GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F E F + GV TA GY GG PTY EVC G TGH E V+V +D ISY+ L
Sbjct: 53 FWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNK----RIVTK 117
IFWE HDP + T +SAIY E+ +QA +S+ R Q + K R++T
Sbjct: 113 QIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITS 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I F AE+ Q+Y
Sbjct: 173 EITVALPFYYAEDDHQQY 190
>sp|Q1CEI4|MSRA_YERPN Peptide methionine sulfoxide reductase MsrA OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F E F + GV TA GY GG PTY EVC G TGH E V+V +D ISY+ L
Sbjct: 53 FWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNK----RIVTK 117
IFWE HDP + T +SAIY E+ +QA +S+ R Q + K R++T
Sbjct: 113 QIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITS 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I F AE+ Q+Y
Sbjct: 173 EITVALPFYYAEDDHQQY 190
>sp|A9R574|MSRA_YERPG Peptide methionine sulfoxide reductase MsrA OS=Yersinia pestis bv.
Antiqua (strain Angola) GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F E F + GV TA GY GG PTY EVC G TGH E V+V +D ISY+ L
Sbjct: 53 FWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNK----RIVTK 117
IFWE HDP + T +SAIY E+ +QA +S+ R Q + K R++T
Sbjct: 113 QIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITS 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I F AE+ Q+Y
Sbjct: 173 EITVALPFYYAEDDHQQY 190
>sp|Q8ZB94|MSRA_YERPE Peptide methionine sulfoxide reductase MsrA OS=Yersinia pestis
GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F E F + GV TA GY GG PTY EVC G TGH E V+V +D ISY+ L
Sbjct: 53 FWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNK----RIVTK 117
IFWE HDP + T +SAIY E+ +QA +S+ R Q + K R++T
Sbjct: 113 QIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITS 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I F AE+ Q+Y
Sbjct: 173 EITVALPFYYAEDDHQQY 190
>sp|B2K2M6|MSRA_YERPB Peptide methionine sulfoxide reductase MsrA OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=msrA
PE=3 SV=1
Length = 212
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F E F + GV TA GY GG PTY EVC G TGH E V+V +D ISY+ L
Sbjct: 53 FWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNK----RIVTK 117
IFWE HDP + T +SAIY E+ +QA +S+ R Q + K R++T
Sbjct: 113 QIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITS 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I F AE+ Q+Y
Sbjct: 173 EITVALPFYYAEDDHQQY 190
>sp|Q1CBX8|MSRA_YERPA Peptide methionine sulfoxide reductase MsrA OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F E F + GV TA GY GG PTY EVC G TGH E V+V +D ISY+ L
Sbjct: 53 FWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNK----RIVTK 117
IFWE HDP + T +SAIY E+ +QA +S+ R Q + K R++T
Sbjct: 113 QIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITS 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I F AE+ Q+Y
Sbjct: 173 EITVALPFYYAEDDHQQY 190
>sp|A7FMV2|MSRA_YERP3 Peptide methionine sulfoxide reductase MsrA OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F E F + GV TA GY GG PTY EVC G TGH E V+V +D ISY+ L
Sbjct: 53 FWGAERLFWQQPGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNK----RIVTK 117
IFWE HDP + T +SAIY E+ +QA +S+ R Q + K R++T
Sbjct: 113 QIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITS 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I F AE+ Q+Y
Sbjct: 173 EITVALPFYYAEDDHQQY 190
>sp|Q9ZEQ8|MSRA_DICD3 Peptide methionine sulfoxide reductase MsrA OS=Dickeya dadantii
(strain 3937) GN=msrA PE=3 SV=1
Length = 213
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F + GV TA+GYCGG PTYREVC G TGH EAV+V +D +SY L
Sbjct: 54 FWGVERLFWQQPGVYSTASGYCGGYTPNPTYREVCTGKTGHAEAVRVVFDPAVVSYPQLL 113
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL----NKRIVTK 117
+FWE H+P + T +SAIY E+ A+ES R Q + N +T
Sbjct: 114 QLFWENHNPAQGMRQGNDIGTQYRSAIYTLTTEQETAAKESYQRFQQAMRDAGNDHDITT 173
Query: 118 IIQFDSEFCMAENQFQKY 135
IQ F AE++ Q+Y
Sbjct: 174 EIQPAGPFYYAEDEHQQY 191
>sp|A7MM56|MSRA_CROS8 Peptide methionine sulfoxide reductase MsrA OS=Cronobacter
sakazakii (strain ATCC BAA-894) GN=msrA PE=3 SV=1
Length = 212
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F L GV TA GY GG PTYREVC G TGH EAV+V YD ISY+ L
Sbjct: 53 FWGVERLFWALPGVYSTAAGYTGGYTPNPTYREVCSGQTGHAEAVRVVYDPNVISYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQES--KIRRQMKL--NKRIVTK 117
+FWE HDP + T +SAIY E+ AQ S + R M+ + R +T
Sbjct: 113 QVFWENHDPAQGMRQGNDVGTQYRSAIYPLTPEQEAAAQASLERFRAAMEAAGDYRHITT 172
Query: 118 IIQFDSEFCMAENQFQKY 135
I F AE++ Q+Y
Sbjct: 173 EIAPAKPFYYAEDEHQQY 190
>sp|B7UQN3|MSRA_ECO27 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L+GV TA GY GG PTYREVC G TGH EAV++ YD ISY+ L
Sbjct: 53 FWGVERLFWQLHGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL-----NKRIVT 116
+FWE HDP T +SAIY E+ A+ S R Q + ++RI T
Sbjct: 113 QVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRRITT 172
Query: 117 KIIQFDSEFCMAENQFQKY 135
+I + F AE+ Q+Y
Sbjct: 173 EIANA-TPFYYAEDDHQQY 190
>sp|B6I2D2|MSRA_ECOSE Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain SE11) GN=msrA PE=3 SV=1
Length = 212
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F +E F +L GV TA GY GG PTYREVC G TGH EAV++ YD ISY+ L
Sbjct: 53 FWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLL 112
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKL-----NKRIVT 116
+FWE HDP T +SAIY E+ A+ S R Q + ++RI T
Sbjct: 113 QVFWENHDPAQGMRQGNDQGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRRITT 172
Query: 117 KIIQFDSEFCMAENQFQKY 135
+I + F AE+ Q+Y
Sbjct: 173 EIANA-TPFYYAEDDHQQY 190
>sp|A4FYX5|MSRA_METM5 Peptide methionine sulfoxide reductase MsrA OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=msrA PE=3
SV=1
Length = 157
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLC 61
F E F ++ GV+ T G+ GGT+K PTY +VC G +GH E V + Y+ + + Y L
Sbjct: 14 FWSAEELFRKIKGVISTEVGFMGGTVKNPTYGQVCRGKSGHIEVVNITYNPKIVKYTDLL 73
Query: 62 DIFWETHDPTNRNYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQF 121
++FW HDPT N + + S I+Y EE+R A++S + Q + RIVT I +
Sbjct: 74 NLFWNNHDPTTPNRQGWDVGEQYSSHIFYFTEEQRLLAEKSFEKIQKSSDLRIVTAIKK- 132
Query: 122 DSEFCMAENQFQKYYLQK 139
S+F AE QKY+++K
Sbjct: 133 ASDFFPAEEYHQKYFMKK 150
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,073,513
Number of Sequences: 539616
Number of extensions: 2095750
Number of successful extensions: 6099
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5674
Number of HSP's gapped (non-prelim): 330
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)