Query 040846
Match_columns 166
No_of_seqs 124 out of 1141
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 20:11:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040846.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040846hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bqh_A PILB, peptide methionin 100.0 1.6E-69 5.4E-74 436.8 12.3 146 2-148 12-157 (193)
2 1fvg_A Peptide methionine sulf 100.0 1.4E-68 4.8E-73 432.9 11.0 143 2-145 53-199 (199)
3 1ff3_A Peptide methionine sulf 100.0 2.2E-68 7.6E-73 435.0 11.5 146 2-148 52-202 (211)
4 3pim_A Peptide methionine sulf 100.0 1.6E-68 5.4E-73 429.1 8.4 143 2-145 29-179 (187)
5 4gwb_A Peptide methionine sulf 100.0 3E-66 1E-70 410.1 12.4 142 2-148 12-156 (168)
6 2j89_A Methionine sulfoxide re 100.0 1.9E-66 6.6E-71 432.6 11.0 141 2-143 104-245 (261)
7 1nwa_A Peptide methionine sulf 100.0 6.2E-65 2.1E-69 412.2 11.4 148 2-155 35-185 (203)
8 3e0m_A Peptide methionine sulf 100.0 2.1E-64 7.2E-69 431.1 9.1 144 2-148 12-155 (313)
9 3dxs_X Copper-transporting ATP 94.4 0.064 2.2E-06 34.0 4.6 43 3-64 18-60 (74)
10 1p6t_A Potential copper-transp 92.7 0.13 4.3E-06 36.8 4.2 44 3-65 90-133 (151)
11 2l3m_A Copper-ION-binding prot 92.5 0.21 7.1E-06 30.5 4.6 43 3-64 21-63 (71)
12 1cpz_A Protein (COPZ); copper 91.9 0.29 9.8E-06 29.4 4.6 43 3-64 16-58 (68)
13 1osd_A MERP, hypothetical prot 91.7 0.3 1E-05 29.8 4.6 43 3-64 19-61 (72)
14 2g9o_A Copper-transporting ATP 91.4 0.23 7.9E-06 33.1 4.1 43 3-64 19-61 (90)
15 2ew9_A Copper-transporting ATP 90.9 0.21 7.2E-06 35.4 3.7 43 3-64 96-138 (149)
16 2qif_A Copper chaperone COPZ; 90.9 0.39 1.3E-05 28.4 4.5 41 4-63 19-59 (69)
17 3cjk_B Copper-transporting ATP 90.8 0.41 1.4E-05 29.7 4.6 43 3-64 18-60 (75)
18 2ofg_X Zinc-transporting ATPas 89.9 0.46 1.6E-05 33.0 4.8 43 3-64 24-66 (111)
19 1aw0_A Menkes copper-transport 89.9 0.42 1.5E-05 29.1 4.1 43 3-64 19-61 (72)
20 1opz_A Potential copper-transp 89.5 0.61 2.1E-05 28.5 4.6 42 4-64 23-64 (76)
21 1yjr_A Copper-transporting ATP 89.4 0.49 1.7E-05 29.0 4.1 43 3-64 20-62 (75)
22 4a4j_A Pacszia, cation-transpo 89.4 0.62 2.1E-05 28.7 4.6 42 3-64 18-59 (69)
23 1y3j_A Copper-transporting ATP 89.3 0.46 1.6E-05 29.7 4.0 43 3-64 19-61 (77)
24 2ldi_A Zinc-transporting ATPas 89.1 0.61 2.1E-05 27.9 4.3 42 3-63 19-60 (71)
25 2xmw_A PACS-N, cation-transpor 88.5 0.64 2.2E-05 28.1 4.2 42 3-64 19-60 (71)
26 1q8l_A Copper-transporting ATP 88.1 0.7 2.4E-05 29.8 4.4 43 3-64 25-67 (84)
27 1kvi_A Copper-transporting ATP 88.1 0.53 1.8E-05 29.5 3.7 43 3-64 24-66 (79)
28 1yg0_A COP associated protein; 86.6 1.3 4.4E-05 26.2 4.7 41 3-63 17-57 (66)
29 2kt2_A Mercuric reductase; nme 86.0 1.1 3.9E-05 27.0 4.2 42 3-64 16-57 (69)
30 2kwa_A Kinase A inhibitor; bac 85.6 0.28 9.6E-06 34.3 1.3 32 12-64 45-86 (101)
31 1jww_A Potential copper-transp 85.3 0.93 3.2E-05 28.1 3.7 42 4-64 20-61 (80)
32 2rop_A Copper-transporting ATP 83.9 1.4 4.8E-05 33.3 4.7 43 3-64 138-180 (202)
33 2phc_B Uncharacterized protein 81.3 1.6 5.3E-05 35.2 4.3 31 12-63 39-69 (225)
34 1fvq_A Copper-transporting ATP 80.3 2.2 7.6E-05 25.6 3.9 41 4-64 19-59 (72)
35 2kkh_A Putative heavy metal tr 78.3 2.9 9.9E-05 27.5 4.3 42 4-64 33-74 (95)
36 2rop_A Copper-transporting ATP 77.3 3.1 0.0001 31.4 4.6 43 3-64 36-78 (202)
37 3va7_A KLLA0E08119P; carboxyla 75.4 5.9 0.0002 39.2 7.1 63 12-98 877-942 (1236)
38 1mwy_A ZNTA; open-faced beta-s 72.5 5.4 0.00018 24.2 4.2 40 3-63 19-58 (73)
39 3j09_A COPA, copper-exporting 71.1 3.9 0.00013 37.7 4.5 45 3-66 18-62 (723)
40 3oep_A Putative uncharacterize 69.4 9 0.00031 34.3 6.3 63 12-101 33-95 (494)
41 2ew9_A Copper-transporting ATP 68.5 5.3 0.00018 27.8 3.8 42 4-64 21-62 (149)
42 3fry_A Probable copper-exporti 53.5 12 0.00043 23.1 3.2 38 3-64 21-58 (73)
43 3iwl_A Copper transport protei 50.5 15 0.00053 22.3 3.3 40 3-65 17-56 (68)
44 1cc8_A Protein (metallochapero 50.0 24 0.0008 21.5 4.1 23 3-25 20-43 (73)
45 3mml_B Allophanate hydrolase s 49.1 39 0.0013 27.1 6.2 68 11-101 53-122 (228)
46 1p6t_A Potential copper-transp 46.7 34 0.0012 23.6 5.0 41 4-63 23-63 (151)
47 2crl_A Copper chaperone for su 44.6 32 0.0011 22.9 4.4 41 3-65 34-74 (98)
48 1xd7_A YWNA; structural genomi 37.2 7.5 0.00026 28.3 0.1 39 5-64 40-80 (145)
49 2k2p_A Uncharacterized protein 33.9 26 0.00089 22.6 2.5 23 3-25 38-60 (85)
50 1ybx_A Conserved hypothetical 33.9 24 0.00081 26.5 2.5 24 40-63 83-112 (143)
51 2f40_A Hypothetical protein PF 31.6 13 0.00046 26.0 0.7 22 41-62 43-64 (96)
52 1ylf_A RRF2 family protein; st 31.2 16 0.00056 26.5 1.1 38 6-64 48-87 (149)
53 2kyz_A Heavy metal binding pro 31.1 22 0.00074 21.0 1.6 21 4-25 18-38 (67)
54 1j8b_A YBAB; hypothetical prot 29.7 13 0.00045 26.6 0.4 16 40-55 50-65 (112)
55 3pvh_A UPF0603 protein AT1G547 26.4 1.5E+02 0.005 21.6 5.8 50 91-141 25-75 (153)
56 2bps_A YUKD protein; ubiquitin 26.2 34 0.0011 23.1 1.9 39 52-90 24-62 (81)
57 2roe_A Heavy metal binding pro 25.6 23 0.0008 20.7 1.0 23 3-25 16-38 (66)
58 2xmm_A SSR2857 protein, ATX1; 24.4 17 0.00059 20.7 0.2 23 3-25 17-39 (64)
59 3e9v_A Protein BTG2; B-cell tr 22.5 1.9E+02 0.0066 20.7 5.6 66 56-127 34-105 (120)
60 2aj0_A Probable cadmium-transp 21.8 29 0.00098 20.6 0.8 23 3-25 19-41 (71)
61 3lwf_A LIN1550 protein, putati 21.7 42 0.0014 25.0 1.9 39 6-64 62-102 (159)
62 2p8i_A Putative dioxygenase; Y 20.7 61 0.0021 23.5 2.5 29 82-111 11-39 (117)
No 1
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=100.00 E-value=1.6e-69 Score=436.83 Aligned_cols=146 Identities=30% Similarity=0.497 Sum_probs=141.7
Q ss_pred CcchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHHhcCCCCCCCCCCCCCC
Q 040846 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFWETHDPTNRNYLNFGLS 81 (166)
Q Consensus 2 FW~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~~~~dPt~~~~Qg~d~G 81 (166)
|||+|+.|+++|||++|+|||+||.++||||++||+|.|||+|+|+|+|||++|||++||++||++||||+.||||+|+|
T Consensus 12 FWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~~~hDPT~~nrQG~D~G 91 (193)
T 3bqh_A 12 FWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDPTSLNKQGNDTG 91 (193)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHHHHSCCBGGGSSSCCTT
T ss_pred eeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHHHhcCCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeccCCHHHHHHHHHHHHHHHhhcCCceEEEEEecCCCccccchhHHHHHHhCCcccccccc
Q 040846 82 THLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQFDSEFCMAENQFQKYYLQKCCRLCESLS 148 (166)
Q Consensus 82 ~qYrs~I~~~~~eq~~~a~~~~~~~~~~~~~~i~teI~p~~~~F~~AE~yHQ~Y~~k~p~~~c~~~~ 148 (166)
+||||+|||+|++|+++|+++++++++.++++|+|+|+|+. +||+||+|||+||.|||.+||++..
T Consensus 92 ~QYRS~If~~~~~Q~~~A~~~~~~~~~~~~~~IvTeI~p~~-~Fy~AE~yHQ~Yl~knp~~Yc~~~~ 157 (193)
T 3bqh_A 92 TQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLK-NFYDAEEYHQDYLIKNPNGYCHIDI 157 (193)
T ss_dssp CTTCEEEEESSHHHHHHHHHHHHHHHTTCSSCBCCEEEECC-CEEECCGGGTTHHHHCTTCCC---C
T ss_pred ccceeeeecCCHHHHHHHHHHHHHHHHHhCCCeEEEEecCC-CeeEcHHHHHHHHHhCCCCceeeec
Confidence 99999999999999999999999999999999999999999 9999999999999999999999854
No 2
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=100.00 E-value=1.4e-68 Score=432.85 Aligned_cols=143 Identities=36% Similarity=0.565 Sum_probs=138.8
Q ss_pred CcchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHHhcCCCCCCCCCCCCCC
Q 040846 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFWETHDPTNRNYLNFGLS 81 (166)
Q Consensus 2 FW~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~~~~dPt~~~~Qg~d~G 81 (166)
|||+|+.|++++||++|+|||+||.++||||++||+|+|||+|+|+|+|||++|||++||++||++||||+.||||+|+|
T Consensus 53 FWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~~hDPT~~nrQG~D~G 132 (199)
T 1fvg_A 53 FWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWENHDPTQGMRQGNDHG 132 (199)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHTSCTTCSSEETTEES
T ss_pred eeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHHhcCCcccCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeccCCHHHHHHHHHHHHHHHhhcC----CceEEEEEecCCCccccchhHHHHHHhCCccccc
Q 040846 82 THLKSAIYYCNEEERKQAQESKIRRQMKLN----KRIVTKIIQFDSEFCMAENQFQKYYLQKCCRLCE 145 (166)
Q Consensus 82 ~qYrs~I~~~~~eq~~~a~~~~~~~~~~~~----~~i~teI~p~~~~F~~AE~yHQ~Y~~k~p~~~c~ 145 (166)
+||||+|||+|++|+++|+++++++++++. ++|+|||+|++ +||+||+|||+||.|||.+||+
T Consensus 133 ~QYRS~If~~~~~Q~~~A~~~~~~~q~~~~~~g~~~IvTeI~p~~-~Fy~AE~yHQ~Yl~knP~~Yc~ 199 (199)
T 1fvg_A 133 SQYRSAIYPTSAEHVGAALKSKEDYQKVLSEHGFGLITTDIREGQ-TFYYAEDYHQQYLSKDPDGYCG 199 (199)
T ss_dssp GGGCEEECCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCCEECSSC-CCEECCGGGTTHHHHSTTCCC-
T ss_pred hhheeccccCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeeCC-CeeECHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999888643 58999999999 9999999999999999999995
No 3
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=100.00 E-value=2.2e-68 Score=435.01 Aligned_cols=146 Identities=39% Similarity=0.607 Sum_probs=141.8
Q ss_pred CcchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHHhcCCCCCCCCCCCCCC
Q 040846 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFWETHDPTNRNYLNFGLS 81 (166)
Q Consensus 2 FW~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~~~~dPt~~~~Qg~d~G 81 (166)
|||+|+.|++++||++|+|||+||.++||||++||+|+|||+|+|+|+|||++|||++||++||++||||+.||||+|+|
T Consensus 52 FWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~~hDPT~~nrQG~D~G 131 (211)
T 1ff3_A 52 FWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHG 131 (211)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHSSCTTSSSEETTEES
T ss_pred eEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHHhcCCcccCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeccCCHHHHHHHHHHHHHHHhh-----cCCceEEEEEecCCCccccchhHHHHHHhCCcccccccc
Q 040846 82 THLKSAIYYCNEEERKQAQESKIRRQMK-----LNKRIVTKIIQFDSEFCMAENQFQKYYLQKCCRLCESLS 148 (166)
Q Consensus 82 ~qYrs~I~~~~~eq~~~a~~~~~~~~~~-----~~~~i~teI~p~~~~F~~AE~yHQ~Y~~k~p~~~c~~~~ 148 (166)
+||||+|||+|++|+++|++++++++++ ++++|+|||+|++ +||+||+|||+||.|||.+||++..
T Consensus 132 tQYRSaIf~~~~eQ~~~A~~~~~~~q~~l~~~g~~~~IvTeI~p~~-~Fy~AE~YHQ~Yl~knP~~Yc~~~~ 202 (211)
T 1ff3_A 132 TQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANAT-PFYYAEDDHQQYLHKNPYGYCGIGG 202 (211)
T ss_dssp GGGCCEECCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEECCCC-CEEECCGGGTTHHHHSCCCCCCCCC
T ss_pred ccceeeeecCCHHHHHHHHHHHHHHHHHHhhcccCCceEEEEeeCC-CceeChHHHHHHHHHCCCCCcCcCC
Confidence 9999999999999999999999988875 4679999999999 9999999999999999999999754
No 4
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=100.00 E-value=1.6e-68 Score=429.06 Aligned_cols=143 Identities=26% Similarity=0.418 Sum_probs=131.5
Q ss_pred CcchhhhhccC--CCceEeeeeecCC--cCCC----CCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHHhcCCCCCC
Q 040846 2 FLDLESAFGRL--NGVMRTATGYCGG--TLKK----PTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFWETHDPTNR 73 (166)
Q Consensus 2 FW~~E~~f~~l--~GV~~t~~GYagG--~~~~----PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~~~~dPt~~ 73 (166)
|||+|++|+++ |||++|+|||+|| .++| |||++||+|+|||+|+|+|+|||++|||++||++||++||||+.
T Consensus 29 FWg~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~~isy~~LL~~Ff~~hDPT~~ 108 (187)
T 3pim_A 29 FWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPKVITLRELTDFFFRIHDPTTS 108 (187)
T ss_dssp HHHHHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTTTSCHHHHHHHHTTSSCCBTT
T ss_pred chhhHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCccCCHHHHHHHHHHhcCCCcC
Confidence 99999999999 9999999999999 8999 99999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCceeeeccCCHHHHHHHHHHHHHHHhhcCCceEEEEEecCCCccccchhHHHHHHhCCccccc
Q 040846 74 NYLNFGLSTHLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQFDSEFCMAENQFQKYYLQKCCRLCE 145 (166)
Q Consensus 74 ~~Qg~d~G~qYrs~I~~~~~eq~~~a~~~~~~~~~~~~~~i~teI~p~~~~F~~AE~yHQ~Y~~k~p~~~c~ 145 (166)
||||+|+|+||||+|||+|++|+++|++++++++++++++|+|||+|++ +||+||+|||+||.|||.+||.
T Consensus 109 nrQG~D~G~QYRS~Ify~~~~Q~~~A~~~~~~l~~~~~~~IvTeI~p~~-~Fy~AE~yHQ~Yl~knP~~Ycc 179 (187)
T 3pim_A 109 NSQGPDKGTQYRSGLFAHSDADLKELAKIKEEWQPKWGNKIATVIEPIK-NFYDAEEYHQLYLDKNPQGYAC 179 (187)
T ss_dssp CC-----CGGGCCEEEESSHHHHHHHHHHHHHHGGGGTTCBCCEEEEEE-EEEEHHHHHHHHCTTCTTCTTC
T ss_pred CCCCCCcCcccceeeEeCCHHHHHHHHHHHHHHHHHhCCCcEEEEeeCC-CeeecHHHHHHHHHHCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999 9999999999999999999976
No 5
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=100.00 E-value=3e-66 Score=410.13 Aligned_cols=142 Identities=29% Similarity=0.565 Sum_probs=137.0
Q ss_pred CcchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHHhcCCCCCCCCCCCCCC
Q 040846 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFWETHDPTNRNYLNFGLS 81 (166)
Q Consensus 2 FW~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~~~~dPt~~~~Qg~d~G 81 (166)
|||+|++|+++|||++|+|||+||.++||||++|| +|+|+|+|+|||++|||++||++||++||||+.||||+|+|
T Consensus 12 FWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~----~HaE~V~V~yDp~~isy~~LL~~F~~~hDPT~~nrQg~D~G 87 (168)
T 4gwb_A 12 FWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHG----THAEGIEIIFDPERISYRRILELFFQIHDPTTKDRQGNDIG 87 (168)
T ss_dssp HHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCT----TCEEEEEEEECTTTCCHHHHHHHHHHHSCTTSTTEETTEES
T ss_pred ccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccC----ceEEEEEEEECCCCCCHHHHHHHHHhhcCCcCcCCCCCCCC
Confidence 99999999999999999999999999999999997 49999999999999999999999999999999999999999
Q ss_pred CCceeeeccCCHHHHHHHHHHHHHHHhh--cCCceEEEEEecCCCccccchhHHHHHHhCCccc-ccccc
Q 040846 82 THLKSAIYYCNEEERKQAQESKIRRQMK--LNKRIVTKIIQFDSEFCMAENQFQKYYLQKCCRL-CESLS 148 (166)
Q Consensus 82 ~qYrs~I~~~~~eq~~~a~~~~~~~~~~--~~~~i~teI~p~~~~F~~AE~yHQ~Y~~k~p~~~-c~~~~ 148 (166)
+||||+||++|++|+++|+++++++++. +.++|+|+|+|++ +||+||+|||+||.|||.+| ||+..
T Consensus 88 ~QYRS~If~~~~~Q~~~a~~~~~~l~~~~~~~~~IvTei~p~~-~Fy~AE~yHQ~Yl~knP~~y~Ch~~~ 156 (168)
T 4gwb_A 88 TSYRSAIYYVDDEQKRIAQETIADVEASGLWPGKVVTEVEPVR-DFWEAEPEHQNYLERYPNGYTCHFPR 156 (168)
T ss_dssp GGGCEEEEESSHHHHHHHHHHHHHHHHHTCSSSCCCCEEEECC-CEEECCGGGTTHHHHSTTSCCCCCCC
T ss_pred cCceEEEecCCHHHHHHHHHHHHHHHHcccCCCCEEEEEEecC-CeeECHHHHHHHHHhCCCCCccCcCC
Confidence 9999999999999999999999999876 6789999999999 99999999999999999987 88754
No 6
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=100.00 E-value=1.9e-66 Score=432.56 Aligned_cols=141 Identities=40% Similarity=0.677 Sum_probs=139.7
Q ss_pred CcchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHHhcCCCCCCCCCCCCCC
Q 040846 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFWETHDPTNRNYLNFGLS 81 (166)
Q Consensus 2 FW~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~~~~dPt~~~~Qg~d~G 81 (166)
|||+|+.|+++|||++|+|||+||.++||||++||+|+|||+|||+|+|||++|||++||++||++||||+.||||+|+|
T Consensus 104 FWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw~~hDPT~~nrQG~D~G 183 (261)
T 2j89_A 104 FWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLWARHDPTTLNRQGNDVG 183 (261)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHHHHSCTTSTTEETTEES
T ss_pred eeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHHhcCCcccCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeccCCHHHHHHHHHHHHHHHhhcCCceEEEEEecCCCccccchhHHHHHHhCCc-cc
Q 040846 82 THLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQFDSEFCMAENQFQKYYLQKCC-RL 143 (166)
Q Consensus 82 ~qYrs~I~~~~~eq~~~a~~~~~~~~~~~~~~i~teI~p~~~~F~~AE~yHQ~Y~~k~p~-~~ 143 (166)
+||||+|||+|++|+++|++++++++++++++|+|||+|+. +||+||||||+||.|||. +|
T Consensus 184 tQYRSaIfy~~eeQ~~~Ae~s~~~~q~~~~~~IvTEI~p~~-~Fy~AEdYHQ~Yl~Kn~~~gy 245 (261)
T 2j89_A 184 TQYRSGIYYYTPEQEKAAKESLERQQKLLNRKIVTEILPAK-KFYRAEEYHQQYLAKGGRFGF 245 (261)
T ss_dssp GGGCEEEEESSHHHHHHHHHHHHHHHTTCSSCCCCEEEECC-CEEECCGGGTTTTTTTTTTSC
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHhcCCCcEEEEecCC-CeeECHHHHHHHHHHCCCCCC
Confidence 99999999999999999999999999999999999999999 999999999999999998 77
No 7
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=100.00 E-value=6.2e-65 Score=412.25 Aligned_cols=148 Identities=27% Similarity=0.494 Sum_probs=139.5
Q ss_pred CcchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHHhcCCCCCCCCCCCCCC
Q 040846 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFWETHDPTNRNYLNFGLS 81 (166)
Q Consensus 2 FW~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~~~~dPt~~~~Qg~d~G 81 (166)
|||+|+.|+++|||++|+|||+||.++||||++ +|+ |+|||+|+|||++|||++||++||++||||+.||||+|+|
T Consensus 35 FWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~--~G~--HaEaV~V~yDp~~iSy~~LL~~Ff~~hDPT~~nrQG~D~G 110 (203)
T 1nwa_A 35 FWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRN--HGT--HAEAVEIIFDPTVTDYRTLLEFFFQIHDPTTKDRQGNDRG 110 (203)
T ss_dssp HHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSC--CTT--CEEEEEEEECTTTCCHHHHHHHHHHHSCTTSTTEETTEES
T ss_pred eeeeHHHHhcCCCeEEEEeeecCCCCCCCChhh--cCC--ceEEEEEEECCCcCCHHHHHHHHHHhcCCcccCCCCCCCC
Confidence 999999999999999999999999999999999 665 9999999999999999999999999999999999999999
Q ss_pred CCceeeeccCCHHHHHHHHHHHHHHHhh--cCCceEEEEEecCCCccccchhHHHHHHhCCccc-ccccccCChhHH
Q 040846 82 THLKSAIYYCNEEERKQAQESKIRRQMK--LNKRIVTKIIQFDSEFCMAENQFQKYYLQKCCRL-CESLSLRSTVQF 155 (166)
Q Consensus 82 ~qYrs~I~~~~~eq~~~a~~~~~~~~~~--~~~~i~teI~p~~~~F~~AE~yHQ~Y~~k~p~~~-c~~~~~~~~~~~ 155 (166)
+||||+|||+|++|+++|++++++++++ +++||+|+|+|++ +||+||+|||+||.|||.+| |+++. +....|
T Consensus 111 tQYRSaIfy~~~eQ~~~A~~~~~~lq~~g~~~~~IvTeI~p~~-~Fy~AE~YHQ~Yl~knP~~Y~c~~~~-~~~~k~ 185 (203)
T 1nwa_A 111 TSYRSAIFYFDEQQKRIALDTIADVEASGLWPGKVVTEVSPAG-DFWEAEPEHQDYLQRYPNGYTCHFVR-PGWRLP 185 (203)
T ss_dssp GGGCEEEEESSHHHHHHHHHHHHHHHHHCCSSSCCCCEEEECC-CEEECCGGGTTHHHHSTTSCCCCCCC-TTSCCS
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHhcCcCCCeEEEEecCC-CEEEChHHHHHHHHhCCCCCcccccH-HHHHhh
Confidence 9999999999999999999999999987 7899999999999 99999999999999999999 76533 444444
No 8
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=100.00 E-value=2.1e-64 Score=431.06 Aligned_cols=144 Identities=24% Similarity=0.454 Sum_probs=141.5
Q ss_pred CcchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHHhcCCCCCCCCCCCCCC
Q 040846 2 FLDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFWETHDPTNRNYLNFGLS 81 (166)
Q Consensus 2 FW~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~~~~dPt~~~~Qg~d~G 81 (166)
|||+|++|+++|||++|+|||+||.++||||++|| +|||+|||+|+|||++|||++||++||++||||+.||||+|+|
T Consensus 12 FWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc--~TGHaEaV~V~yDp~~isy~~LL~~f~~~hDPT~~nrQG~D~G 89 (313)
T 3e0m_A 12 FWGLEEYFSRISGVLETSVGYANGQVETTNYQLLK--ETDHAETVQVIYDEKEVSLREILLYYFRVIDPLSINQQGNDRG 89 (313)
T ss_dssp HHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHH--HHTCEEEEEEEECTTTSCHHHHHHHHHHHSCTTCSSEETTEES
T ss_pred chhhHHHHhhCCCeEEeecccCCCCCCCCChhhhc--cCCCeEEEEEEECCCcCCHHHHHHHHHhhcCCCcCCCcCCCCc
Confidence 99999999999999999999999999999999999 7999999999999999999999999999999999999999999
Q ss_pred CCceeeeccCCHHHHHHHHHHHHHHHhhcCCceEEEEEecCCCccccchhHHHHHHhCCcccccccc
Q 040846 82 THLKSAIYYCNEEERKQAQESKIRRQMKLNKRIVTKIIQFDSEFCMAENQFQKYYLQKCCRLCESLS 148 (166)
Q Consensus 82 ~qYrs~I~~~~~eq~~~a~~~~~~~~~~~~~~i~teI~p~~~~F~~AE~yHQ~Y~~k~p~~~c~~~~ 148 (166)
+||||+|||+|++|+++|+++++++++++++||+|+|+|++ +||+||+|||+||.|||.+||++..
T Consensus 90 ~QYRS~Ify~~~~Q~~~a~~~~~~~~~~~~~~IvTeI~p~~-~Fy~AE~yHQ~Yl~knP~~Yc~~~~ 155 (313)
T 3e0m_A 90 RQYRTGIYYQDEADLPAIYTVVQEQERMLGRKIAVEVEQLR-HYILAEDYHQDYLRKNPSGYCHIDV 155 (313)
T ss_dssp GGGCCEEEESCGGGHHHHHHHHHHHHHHHSSCCCCEEEECC-CEEECCGGGTTHHHHSTTCCCCSCG
T ss_pred cccceeEecCCHHHHHHHHHHHHHHHHhcCCCeEEEEeecc-ceeEcHHHHHHHHHHCCCcceeeec
Confidence 99999999999999999999999999999999999999999 9999999999999999999998744
No 9
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=94.36 E-value=0.064 Score=34.00 Aligned_cols=43 Identities=16% Similarity=0.315 Sum_probs=36.0
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|+.+.+++||.++.+-++.+ .+.|.||+..++.++|++..
T Consensus 18 ~~ie~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 60 (74)
T 3dxs_X 18 NSVEAALMNVNGVFKASVALLQN-------------------RADVVFDPNLVKEEDIKEEI 60 (74)
T ss_dssp HHHHHHHHTSTTEEEEEEEGGGT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 45788999999999999977644 36799999999999998775
No 10
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=92.69 E-value=0.13 Score=36.85 Aligned_cols=44 Identities=18% Similarity=0.274 Sum_probs=36.7
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFW 65 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~ 65 (166)
|.+|..+.+++||.++.+-++.+ .+.|.|||..++.++|++..=
T Consensus 90 ~~ie~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i~ 133 (151)
T 1p6t_A 90 NRIEKRLNKIEGVANAPVNFALE-------------------TVTVEYNPKEASVSDLKEAVD 133 (151)
T ss_dssp HHHHHHHTTSSSEEECCEETTTT-------------------EEEEEECTTTCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCceEEEEEccCC-------------------EEEEEECCCCCCHHHHHHHHH
Confidence 56889999999999998877644 367899999999999988753
No 11
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=92.50 E-value=0.21 Score=30.54 Aligned_cols=43 Identities=26% Similarity=0.417 Sum_probs=34.4
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|++..
T Consensus 21 ~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 63 (71)
T 2l3m_A 21 NAIESSVKELNGVEQVKVQLAEG-------------------TVEVTIDSSVVTLKDIVAVI 63 (71)
T ss_dssp HHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 34788899999999998877644 36689999999998888753
No 12
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=91.87 E-value=0.29 Score=29.44 Aligned_cols=43 Identities=21% Similarity=0.420 Sum_probs=34.3
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|..+.+++||.+..+-+..+ .+.|.|||..++.++|.+..
T Consensus 16 ~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 58 (68)
T 1cpz_A 16 ARIEEAVGRISGVKKVKVQLKKE-------------------KAVVKFDEANVQATEICQAI 58 (68)
T ss_dssp HHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 34688899999999998877644 35689999999988888753
No 13
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=91.66 E-value=0.3 Score=29.82 Aligned_cols=43 Identities=16% Similarity=0.294 Sum_probs=34.4
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|++..
T Consensus 19 ~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 61 (72)
T 1osd_A 19 ITVKKAISKVEGVSKVDVTFETR-------------------QAVVTFDDAKTSVQKLTKAT 61 (72)
T ss_dssp HHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEEETTTCCHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 34688899999999998876644 36689999999988888764
No 14
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=91.41 E-value=0.23 Score=33.06 Aligned_cols=43 Identities=19% Similarity=0.244 Sum_probs=35.2
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
|.+|+.+.+++||.++.+-++.+ .+.|.|||..++.++|++..
T Consensus 19 ~~Ie~~L~~~~GV~~v~v~l~~~-------------------~~~V~~~~~~~~~~~i~~~i 61 (90)
T 2g9o_A 19 SNIESTLSALQYVSSIVVSLENR-------------------SAIVVYNASSVTPESLRKAI 61 (90)
T ss_dssp HHHHHHHTTCTTEEEEEEETTTT-------------------EEEEEECCSSCCTHHHHHHH
T ss_pred HHHHHHHHcCCCeeEEEEEccCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 45789999999999999877644 36789999999988888763
No 15
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=90.95 E-value=0.21 Score=35.37 Aligned_cols=43 Identities=21% Similarity=0.355 Sum_probs=35.8
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
|.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|++..
T Consensus 96 ~~ie~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 138 (149)
T 2ew9_A 96 HNIESKLTRTNGITYASVALATS-------------------KALVKFDPEIIGPRDIIKII 138 (149)
T ss_dssp HHHHHHHHHSSSCCEEEEETTTT-------------------EEEEECCTTTSCHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEEEcCCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 56789999999999999877654 36789999999999988764
No 16
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=90.87 E-value=0.39 Score=28.43 Aligned_cols=41 Identities=29% Similarity=0.507 Sum_probs=32.6
Q ss_pred chhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHH
Q 040846 4 DLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDI 63 (166)
Q Consensus 4 ~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~ 63 (166)
.+|..+..++||.+..+-+..+ .+.|.|||..++.++|.+.
T Consensus 19 ~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~ 59 (69)
T 2qif_A 19 AVETSVGELDGVSAVHVNLEAG-------------------KVDVSFDADKVSVKDIADA 59 (69)
T ss_dssp HHHHHHHTSTTEEEEEEETTTT-------------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHhcCCCeeEEEEEecCC-------------------EEEEEECCCCCCHHHHHHH
Confidence 4678899999999888776544 2568899999998888765
No 17
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=90.76 E-value=0.41 Score=29.65 Aligned_cols=43 Identities=21% Similarity=0.367 Sum_probs=34.5
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|.+..
T Consensus 18 ~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 60 (75)
T 3cjk_B 18 WTIEQQIGKVNGVHHIKVSLEEK-------------------NATIIYDPKLQTPKTLQEAI 60 (75)
T ss_dssp HHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 34688899999999998877654 36689999999988888764
No 18
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=89.94 E-value=0.46 Score=32.98 Aligned_cols=43 Identities=26% Similarity=0.450 Sum_probs=35.4
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|++..
T Consensus 24 ~~Ie~~L~~~~GV~~v~v~~~~~-------------------~~~V~~~~~~~~~~~i~~~i 66 (111)
T 2ofg_X 24 LKIEGSLERLKGVAEASVTVATG-------------------RLTVTYDPKQVSEITIQERI 66 (111)
T ss_dssp HHHHHHHTTSSSEEEEEEETTTT-------------------EEEEEECTTTCSHHHHHHHH
T ss_pred HHHHHHHHcCCCeeEEEEECCCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 45788999999999999877654 36789999999998888764
No 19
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=89.89 E-value=0.42 Score=29.07 Aligned_cols=43 Identities=19% Similarity=0.189 Sum_probs=34.1
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|++..
T Consensus 19 ~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 61 (72)
T 1aw0_A 19 QSIEGVISKKPGVKSIRVSLANS-------------------NGTVEYDPLLTSPETLRGAI 61 (72)
T ss_dssp HHHHHHHHTSTTCCCEEEETTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEEEccCC-------------------EEEEEECCCcCCHHHHHHHH
Confidence 34788899999999988876644 36689999999988887753
No 20
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=89.47 E-value=0.61 Score=28.46 Aligned_cols=42 Identities=19% Similarity=0.351 Sum_probs=33.5
Q ss_pred chhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 4 DLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 4 ~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
.+|..+.+++||.+..+-+..+ .+.|.|||..++.++|.+..
T Consensus 23 ~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 64 (76)
T 1opz_A 23 RIEKGLKRMPGVTDANVNLATE-------------------TVNVIYDPAETGTAAIQEKI 64 (76)
T ss_dssp HHHHHHHTSTTEEEEEEEGGGT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHhcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 4688899999999988876644 35688999999988887753
No 21
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=89.44 E-value=0.49 Score=29.02 Aligned_cols=43 Identities=14% Similarity=0.327 Sum_probs=33.6
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|.+..
T Consensus 20 ~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 62 (75)
T 1yjr_A 20 HKIESSLTKHRGILYCSVALATN-------------------KAHIKYDPEIIGPRDIIHTI 62 (75)
T ss_dssp HHHHHHHTTSTTEEEEEEETTTT-------------------EEEEEECTTTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 34688899999999988876644 36689999988888777653
No 22
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=89.38 E-value=0.62 Score=28.68 Aligned_cols=42 Identities=19% Similarity=0.256 Sum_probs=33.9
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|..+.+++||.++.+-+..+ .+.|.| +..++.++|++..
T Consensus 18 ~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~-~~~~~~~~i~~~i 59 (69)
T 4a4j_A 18 SSIERAIAKVPGVQSCQVNFALE-------------------QAVVSY-HGETTPQILTDAV 59 (69)
T ss_dssp HHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEE-CTTCCHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEEEecCC-------------------EEEEEE-CCCCCHHHHHHHH
Confidence 34788899999999999877644 367889 7889999998765
No 23
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=89.33 E-value=0.46 Score=29.74 Aligned_cols=43 Identities=16% Similarity=0.329 Sum_probs=33.5
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|.+..
T Consensus 19 ~~ie~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 61 (77)
T 1y3j_A 19 ANIERNLRREEGIYSILVALMAG-------------------KAEVRYNPAVIQPPMIAEFI 61 (77)
T ss_dssp HHHHHHHTTSSSEEECCCBTTTT-------------------BEEEEECTTTSCHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 35788999999999887765543 25688999999988888764
No 24
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=89.08 E-value=0.61 Score=27.87 Aligned_cols=42 Identities=26% Similarity=0.410 Sum_probs=32.8
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDI 63 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~ 63 (166)
+.+|..+.+++||.+..+-+..+ .+.|.||+..++.++|.+.
T Consensus 19 ~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~ 60 (71)
T 2ldi_A 19 SSIERALERLKGVAEASVTVATG-------------------RLTVTYDPKQVSEITIQER 60 (71)
T ss_dssp HHHHTGGGGCSSEEEEEEETTTT-------------------EEEEEECTTTCCTHHHHHH
T ss_pred HHHHHHHhcCCCeeEEEEEecCC-------------------EEEEEECCCCCCHHHHHHH
Confidence 34788899999999988876644 2567899988888887765
No 25
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=88.51 E-value=0.64 Score=28.06 Aligned_cols=42 Identities=19% Similarity=0.268 Sum_probs=30.1
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|..+.+++||.++.+-+..+ .+.|.||+. ++.++|.+..
T Consensus 19 ~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~-~~~~~i~~~i 60 (71)
T 2xmw_A 19 SSIERAIAKVPGVQSCQVNFALE-------------------QAVVSYHGE-TTPQILTDAV 60 (71)
T ss_dssp HHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEEC----CHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEEEccCC-------------------EEEEEECCC-CCHHHHHHHH
Confidence 34688899999999999877644 356889987 8888887653
No 26
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=88.15 E-value=0.7 Score=29.76 Aligned_cols=43 Identities=21% Similarity=0.359 Sum_probs=34.4
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|.+..
T Consensus 25 ~~ie~~l~~~~GV~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 67 (84)
T 1q8l_A 25 STIEGKIGKLQGVQRIKVSLDNQ-------------------EATIVYQPHLISVEEMKKQI 67 (84)
T ss_dssp HHHHHHHHTCTTEEEEEECSTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 45788999999999988866543 36789999999998888764
No 27
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=88.12 E-value=0.53 Score=29.49 Aligned_cols=43 Identities=21% Similarity=0.367 Sum_probs=34.2
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|.+..
T Consensus 24 ~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 66 (79)
T 1kvi_A 24 WTIEQQIGKVNGVHHIKVSLEEK-------------------NATIIYDPKLQTPKTLQEAI 66 (79)
T ss_dssp HHHHHHHHHSSSCCCEEEEGGGT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEEEccCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 45788899999999888876644 36689999999988887764
No 28
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=86.64 E-value=1.3 Score=26.16 Aligned_cols=41 Identities=17% Similarity=0.183 Sum_probs=31.2
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDI 63 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~ 63 (166)
+.+|..+.+++||.+..+-+..+ .+.|.|||.. +.++|.+.
T Consensus 17 ~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~-~~~~i~~~ 57 (66)
T 1yg0_A 17 DKIEKFVGEIEGVSFIDVSVEKK-------------------SVVVEFDAPA-TQDLIKEA 57 (66)
T ss_dssp HHHHHHHTTSSSEEEEEEETTTT-------------------EEEEEECTTC-CHHHHHHH
T ss_pred HHHHHHHhcCCCceEEEEEcCCC-------------------EEEEEECCCC-CHHHHHHH
Confidence 34788899999999988876644 2568899875 77777765
No 29
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=85.95 E-value=1.1 Score=26.95 Aligned_cols=42 Identities=17% Similarity=0.220 Sum_probs=32.4
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|..+.+++||.++.+-+..+ .+.|.||+. ++.++|++..
T Consensus 16 ~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~-~~~~~i~~~i 57 (69)
T 2kt2_A 16 AHVKEALEKVPGVQSALVSYPKG-------------------TAQLAIVPG-TSPDALTAAV 57 (69)
T ss_dssp HHHHHHHHHSTTEEEEEEETTTT-------------------EEEEEECTT-SCHHHHHHHH
T ss_pred HHHHHHHHcCCCeeEEEEEccCC-------------------EEEEEECCC-CCHHHHHHHH
Confidence 34688899999999998877654 255789987 6888877663
No 30
>2kwa_A Kinase A inhibitor; bacterial signal transduction, KIPI, histidine kinase inhibi bacillus subtilis, transferase inhibitor; NMR {Bacillus subtilis}
Probab=85.59 E-value=0.28 Score=34.34 Aligned_cols=32 Identities=19% Similarity=0.462 Sum_probs=26.5
Q ss_pred CCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCC----------CHHHHHHHH
Q 040846 12 LNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTI----------SYKSLCDIF 64 (166)
Q Consensus 12 l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~i----------s~~~Ll~~f 64 (166)
++||++++.||. .|.|.|||..+ +++.|+...
T Consensus 45 ~~Gv~EiVPa~~---------------------SllV~ydp~~i~~~~~~~~~~~~~~l~~~L 86 (101)
T 2kwa_A 45 FPGFIECIPAFT---------------------SLTVFYDMYEVYKHLPQGISSPFESVKRDV 86 (101)
T ss_dssp CTTEEEEEECSS---------------------EEEEEECHHHHHTTCCTTCCSHHHHHHHHH
T ss_pred CCCeEEeccCce---------------------EEEEEEcchHhcccccccccCCHHHHHHHH
Confidence 799999999887 58899999988 777776643
No 31
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=85.26 E-value=0.93 Score=28.13 Aligned_cols=42 Identities=19% Similarity=0.352 Sum_probs=32.3
Q ss_pred chhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 4 DLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 4 ~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
.+|..+.+++||.+..+-+..+ .+.|.|||..++.++|.+..
T Consensus 20 ~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 61 (80)
T 1jww_A 20 RIEKRLNKIEGVANAPVNFALE-------------------TVTVEYNPKEASVSDLKEAV 61 (80)
T ss_dssp HHHHHHHTSTTEEECCCCSSSS-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHhcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 4678899999998877655533 35688999999988887754
No 32
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=83.87 E-value=1.4 Score=33.35 Aligned_cols=43 Identities=23% Similarity=0.403 Sum_probs=35.4
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
|.+|..+.+++||.++.+-++.+ .+.|.|||..++.++|++..
T Consensus 138 ~~ie~~l~~~~GV~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 180 (202)
T 2rop_A 138 HSIEGMISQLEGVQQISVSLAEG-------------------TATVLYNPAVISPEELRAAI 180 (202)
T ss_dssp HHHHHHGGGSSSEEEEEEETTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHcCCCeEEEEEEccCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 45788999999999999877644 36689999999999888764
No 33
>2phc_B Uncharacterized protein PH0987; structural genomics, southeas collaboratory for structural genomics, secsg, PSI, protein initiative; 2.29A {Pyrococcus horikoshii} SCOP: b.62.1.4 d.74.5.1
Probab=81.33 E-value=1.6 Score=35.24 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=27.2
Q ss_pred CCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHH
Q 040846 12 LNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDI 63 (166)
Q Consensus 12 l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~ 63 (166)
++||++++.||. .+.|.|||.+++..+|+..
T Consensus 39 ~~gv~e~vP~~~---------------------sl~V~~dp~~~~~~~l~~~ 69 (225)
T 2phc_B 39 PEWLVELVPAYS---------------------SLLVIYDPLKASYEEVESY 69 (225)
T ss_dssp CTTEEEEEEETT---------------------EEEEEECTTTSCHHHHHHH
T ss_pred CCCeEEeeccce---------------------EEEEEEcCCcCCHHHHHHH
Confidence 799999999886 5889999999999888764
No 34
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=80.35 E-value=2.2 Score=25.63 Aligned_cols=41 Identities=20% Similarity=0.401 Sum_probs=31.1
Q ss_pred chhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 4 DLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 4 ~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
.+|..+.+++||.+..+-+..+ .+.|.|| ..++.++|.+..
T Consensus 19 ~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~-~~~~~~~i~~~i 59 (72)
T 1fvq_A 19 TINTQLRALKGVTKCDISLVTN-------------------ECQVTYD-NEVTADSIKEII 59 (72)
T ss_dssp HHHHHHHTSSSEEEECCBTTTT-------------------EEEEEEC-TTSCHHHHHHHH
T ss_pred HHHHHHhcCCCeEEEEEEecCC-------------------EEEEEEC-CCCCHHHHHHHH
Confidence 4678899999999888765543 3567899 778888887753
No 35
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=78.35 E-value=2.9 Score=27.46 Aligned_cols=42 Identities=21% Similarity=0.150 Sum_probs=32.8
Q ss_pred chhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 4 DLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 4 ~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
.+|..+..++||.++.+-+..+ .+.|.||+..++.++|+...
T Consensus 33 ~ie~~l~~~~GV~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 74 (95)
T 2kkh_A 33 IIENILKSLDGVKEYSVIVPSR-------------------TVIVVHDSLLISPFQIAKAL 74 (95)
T ss_dssp HHHHHHHHSSSEEEEEEETTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHhcCCCeeEEEEEccCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 3678889999999888876644 35678999988888887764
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=77.25 E-value=3.1 Score=31.39 Aligned_cols=43 Identities=26% Similarity=0.316 Sum_probs=34.3
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
|.+|..+.+++||.++.+-++.+ .+.|.||+..++.++|.+..
T Consensus 36 ~~ie~~l~~~~GV~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 78 (202)
T 2rop_A 36 LNIEENIGQLLGVQSIQVSLENK-------------------TAQVKYDPSCTSPVALQRAI 78 (202)
T ss_dssp HHHHHHTTSBTTEEEEEEETTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 45788999999999998877644 35688999999988877653
No 37
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=75.41 E-value=5.9 Score=39.15 Aligned_cols=63 Identities=14% Similarity=0.117 Sum_probs=40.4
Q ss_pred CCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHHhcCC---CCCCCCCCCCCCCCceeee
Q 040846 12 LNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFWETHD---PTNRNYLNFGLSTHLKSAI 88 (166)
Q Consensus 12 l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~~~~d---Pt~~~~Qg~d~G~qYrs~I 88 (166)
++||++++.||. .+.|.|||.++++.+|++..-+... +.... ...++..+-=|
T Consensus 877 ~~gv~e~vP~~~---------------------sl~v~~dp~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~r~v~iPv 932 (1236)
T 3va7_A 877 TVGIVEMSQGVR---------------------SVLIEFDGSKINQKALLKCLIAYESEIQFDKNW---NVKSKIFKLPM 932 (1236)
T ss_dssp CTTEEEEEECSS---------------------EEEEEECTTTSCHHHHHHHHHHHHTTCCCCTTC---EEEEEEEEEEE
T ss_pred CCCeEEeeccce---------------------EEEEEECCCCCCHHHHHHHHHHHHhhccccccc---CCCCcEEEEee
Confidence 799999998775 3789999999999999877644322 21110 11234455566
Q ss_pred ccCCHHHHHH
Q 040846 89 YYCNEEERKQ 98 (166)
Q Consensus 89 ~~~~~eq~~~ 98 (166)
.|.++.-++.
T Consensus 933 ~y~~~~~~~~ 942 (1236)
T 3va7_A 933 AFEDSKTLDC 942 (1236)
T ss_dssp EETCHHHHHH
T ss_pred EeCCcchhhH
Confidence 6666643333
No 38
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=72.53 E-value=5.4 Score=24.22 Aligned_cols=40 Identities=18% Similarity=0.145 Sum_probs=29.3
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDI 63 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~ 63 (166)
+.+|..+.+++||.++.+-+..+ .+.|.||+. ..++|.+.
T Consensus 19 ~~ie~~l~~~~gV~~~~v~~~~~-------------------~~~v~~~~~--~~~~i~~~ 58 (73)
T 1mwy_A 19 RKVENAVRQLAGVNQVQVLFATE-------------------KLVVDADND--IRAQVESA 58 (73)
T ss_dssp HHHHHHHHTSSSEEEEEEETTTT-------------------EEEEEESSC--CHHHHHHH
T ss_pred HHHHHHHhcCCCeeEEEEEecCC-------------------EEEEEECCC--CHHHHHHH
Confidence 34788999999999999877654 256789984 35666554
No 39
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=71.06 E-value=3.9 Score=37.73 Aligned_cols=45 Identities=18% Similarity=0.379 Sum_probs=38.1
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHHh
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFWE 66 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~~ 66 (166)
|.+|+.+.++|||.++.+-++.+ .+.|.|||..++.++|++..=+
T Consensus 18 ~~Ie~~L~~~~GV~~v~Vnl~~~-------------------~~~V~~d~~~~~~~~i~~ai~~ 62 (723)
T 3j09_A 18 KSIETAVGSLEGVEEVRVNLATE-------------------TAFIRFDEKRIDFETIKRVIED 62 (723)
T ss_dssp HHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEECTTTCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCceEEEEEcCCC-------------------EEEEEeCCCcCCHHHHHHHHHh
Confidence 56899999999999999987754 3679999999999999987654
No 40
>3oep_A Putative uncharacterized protein TTHA0988; KIPI, KIPA, cyclophilin, allophanate hydrolase, structural G unknown function, NPPSFA; 1.75A {Thermus thermophilus} PDB: 3opf_A 3ore_A
Probab=69.45 E-value=9 Score=34.32 Aligned_cols=63 Identities=16% Similarity=0.205 Sum_probs=42.3
Q ss_pred CCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHHhcCCCCCCCCCCCCCCCCceeeeccC
Q 040846 12 LNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFWETHDPTNRNYLNFGLSTHLKSAIYYC 91 (166)
Q Consensus 12 l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~~~~dPt~~~~Qg~d~G~qYrs~I~~~ 91 (166)
++||++++.+|. .|.|.|||..+++++|++..-..... . ...++..+-=|.|.
T Consensus 33 ~~gv~e~vP~~~---------------------sllV~ydp~~~~~~~l~~~l~~~~~~--~----~~~~r~v~IPV~Y~ 85 (494)
T 3oep_A 33 PPGLLDAVPAYG---------------------VLYLEYDPRRLSRGRLLRLLKGLPQE--R----AEEGRVVEIPVRYD 85 (494)
T ss_dssp CTTEEEEEEETT---------------------EEEEEECTTTSCHHHHHHHHHHCC-------------CEEEEEEECC
T ss_pred CCCcEEeecccc---------------------EEEEEecCCCCCHHHHHHHHHHhhhc--c----cCCCcEEEEEeecC
Confidence 689999998775 37899999999999999876544322 1 12345566677777
Q ss_pred CHHHHHHHHH
Q 040846 92 NEEERKQAQE 101 (166)
Q Consensus 92 ~~eq~~~a~~ 101 (166)
.++-..+|+.
T Consensus 86 g~DL~~vA~~ 95 (494)
T 3oep_A 86 GEDLPEVASR 95 (494)
T ss_dssp CTTHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 7755555553
No 41
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=68.48 E-value=5.3 Score=27.78 Aligned_cols=42 Identities=17% Similarity=0.370 Sum_probs=32.3
Q ss_pred chhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 4 DLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 4 ~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
.+|..+.+++||.+..+-+..+ .+.|.|||..++.++|.+..
T Consensus 21 ~ie~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 62 (149)
T 2ew9_A 21 NIERNLQKEAGVLSVLVALMAG-------------------KAEIKYDPEVIQPLEIAQFI 62 (149)
T ss_dssp HHHHHHHTTSSCCCEEEETTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHhcCCCcEEEEEEecCC-------------------EEEEEEcCCCCCHHHHHHHH
Confidence 4688899999998888766543 25688999989888877653
No 42
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=53.51 E-value=12 Score=23.05 Aligned_cols=38 Identities=8% Similarity=0.023 Sum_probs=28.3
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+.+|..+.+ +||.++.+-+. ...+.|.|| +.++|.+..
T Consensus 21 ~~ie~~l~~-~gv~~~~v~~~-------------------~~~~~v~~~----~~~~i~~~i 58 (73)
T 3fry_A 21 ARVKKALEE-AGAKVEKVDLN-------------------EAVVAGNKE----DVDKYIKAV 58 (73)
T ss_dssp HHHHHHHHH-TTCEEEEECSS-------------------EEEEEEEGG----GHHHHHHHH
T ss_pred HHHHHHhcc-CCcEEEEEEcc-------------------CCEEEEEEC----CHHHHHHHH
Confidence 346888999 99999988655 345678888 677777654
No 43
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=50.50 E-value=15 Score=22.32 Aligned_cols=40 Identities=15% Similarity=0.121 Sum_probs=29.4
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFW 65 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~ 65 (166)
+.+|..+.+++|| ++.+-+..+. +.|.+ .++.++|++..=
T Consensus 17 ~~i~~~l~~~~gV-~v~v~~~~~~-------------------~~v~~---~~~~~~i~~~i~ 56 (68)
T 3iwl_A 17 EAVSRVLNKLGGV-KYDIDLPNKK-------------------VCIES---EHSMDTLLATLK 56 (68)
T ss_dssp HHHHHHHHHHCSE-EEEEETTTTE-------------------EEEEE---SSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCe-EEEEEcCCCE-------------------EEEEe---cCCHHHHHHHHH
Confidence 3478889999999 9998887552 44666 367888887653
No 44
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=50.01 E-value=24 Score=21.51 Aligned_cols=23 Identities=9% Similarity=0.079 Sum_probs=19.1
Q ss_pred cchhhhhccCC-CceEeeeeecCC
Q 040846 3 LDLESAFGRLN-GVMRTATGYCGG 25 (166)
Q Consensus 3 W~~E~~f~~l~-GV~~t~~GYagG 25 (166)
+.+|+.+.+++ ||.++.+-+..+
T Consensus 20 ~~ie~~l~~~~~GV~~~~v~~~~~ 43 (73)
T 1cc8_A 20 GAVNKVLTKLEPDVSKIDISLEKQ 43 (73)
T ss_dssp HHHHHHHHTTTTSEEEEEEETTTT
T ss_pred HHHHHHHHhCCCCceEEEEECCCC
Confidence 35788999999 999999887755
No 45
>3mml_B Allophanate hydrolase subunit 1; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis}
Probab=49.08 E-value=39 Score=27.07 Aligned_cols=68 Identities=12% Similarity=-0.004 Sum_probs=42.0
Q ss_pred cCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHHhcCCCCCCC--CCCCCCCCCceeee
Q 040846 11 RLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFWETHDPTNRN--YLNFGLSTHLKSAI 88 (166)
Q Consensus 11 ~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~~~~dPt~~~--~Qg~d~G~qYrs~I 88 (166)
.++||++++.||. +|.|.|||..++. +++... +..+-.... ..-...++..+-=+
T Consensus 53 ~~~gv~e~vP~~~---------------------SllV~ydp~~~~~-~~~~~l-~~l~~~~~~~~~~~~~~~r~v~IPV 109 (228)
T 3mml_B 53 ELLGVVDIVPAAR---------------------TVLVKLAGPRYQA-PTRQRL-GKLRVRPEAITHQPPGDRVDVTIDV 109 (228)
T ss_dssp TCTTEEEEEECSS---------------------EEEEEESSGGGHH-HHHHHH-TTCCCSCSSCCCSCGGGCCSEEEEE
T ss_pred CCCCcEEeecccc---------------------EEEEEEcCccCCH-HHHHHH-HHHHhcccccccccCCCCcEEEEec
Confidence 4689999988775 3789999999987 455543 333221110 01122356667777
Q ss_pred ccCCHHHHHHHHH
Q 040846 89 YYCNEEERKQAQE 101 (166)
Q Consensus 89 ~~~~~eq~~~a~~ 101 (166)
.|.+++-..+|+.
T Consensus 110 ~Y~gpDL~~vA~~ 122 (228)
T 3mml_B 110 VYDGADLHEVASL 122 (228)
T ss_dssp ECCCTTHHHHHHH
T ss_pred cCCCCCHHHHHHH
Confidence 8887666666654
No 46
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=46.74 E-value=34 Score=23.63 Aligned_cols=41 Identities=20% Similarity=0.351 Sum_probs=30.6
Q ss_pred chhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHH
Q 040846 4 DLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDI 63 (166)
Q Consensus 4 ~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~ 63 (166)
.+|..+.+++||.+..+.+..+ .+.|.|||..++.++|.+.
T Consensus 23 ~ie~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~ 63 (151)
T 1p6t_A 23 RIEKGLKRMPGVTDANVNLATE-------------------TVNVIYDPAETGTAAIQEK 63 (151)
T ss_dssp HHHHHHTTSSSEEEEEEEGGGT-------------------EEEEEECTTTSCHHHHHHH
T ss_pred HHHHHHhcCCCeeEEEEEccCC-------------------EEEEEEcCCcCCHHHHHHH
Confidence 3678889999998888776643 2457789888888777654
No 47
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.57 E-value=32 Score=22.88 Aligned_cols=41 Identities=10% Similarity=0.073 Sum_probs=29.9
Q ss_pred cchhhhhccCCCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHHH
Q 040846 3 LDLESAFGRLNGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIFW 65 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f~ 65 (166)
+.+|..+.+++||.++.+-+..+. +.|.|+ ++.++|++..=
T Consensus 34 ~~Ie~aL~~l~GV~~v~vdl~~~~-------------------~~V~~~---~~~~~i~~~i~ 74 (98)
T 2crl_A 34 DAVRKSLQGVAGVQDVEVHLEDQM-------------------VLVHTT---LPSQEVQALLE 74 (98)
T ss_dssp HHHHHTTTTCTTCCEEEEETTTTE-------------------EEEEES---SCHHHHHHHHH
T ss_pred HHHHHHHHcCCCceEEEEECCCCE-------------------EEEEEe---CCHHHHHHHHH
Confidence 457889999999999998776542 445663 57777777653
No 48
>1xd7_A YWNA; structural genomics, protein structure initiative, winged HE binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=37.23 E-value=7.5 Score=28.28 Aligned_cols=39 Identities=15% Similarity=0.243 Sum_probs=29.5
Q ss_pred hhhhhccC--CCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 5 LESAFGRL--NGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 5 ~E~~f~~l--~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
+++++..| .|++.++-| .|| .++.=+|+.||+.++++..
T Consensus 40 l~kIl~~L~~aGlv~s~rG-~GG--------------------y~Lar~p~~Itl~dVi~av 80 (145)
T 1xd7_A 40 VRRMISLLKKADILTSRAG-VPG--------------------ASLKKDPADISLLEVYRAV 80 (145)
T ss_dssp HHHHHHHHHHTTSEECCSS-SSS--------------------CEESSCGGGCBHHHHHHHH
T ss_pred HHHHHHHHHHCCceEeecC-CCC--------------------ceecCCHHHCCHHHHHHHH
Confidence 45566665 688888888 776 2466688999999999875
No 49
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=33.92 E-value=26 Score=22.63 Aligned_cols=23 Identities=4% Similarity=-0.151 Sum_probs=18.6
Q ss_pred cchhhhhccCCCceEeeeeecCC
Q 040846 3 LDLESAFGRLNGVMRTATGYCGG 25 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG 25 (166)
+.+|..+.+++||.++.+-+..+
T Consensus 38 ~~Ie~aL~~~~GV~~v~v~l~~~ 60 (85)
T 2k2p_A 38 GVIKGAIEKTVPGAAVHADPASR 60 (85)
T ss_dssp HHHHHHHHHHSTTCEEEEETTTT
T ss_pred HHHHHHHhcCCCeeEEEEECCCC
Confidence 34788899999999999877654
No 50
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=33.91 E-value=24 Score=26.53 Aligned_cols=24 Identities=13% Similarity=0.234 Sum_probs=18.9
Q ss_pred CCcEEEEEEEEcCCCCC------HHHHHHH
Q 040846 40 TGHTEAVKVFYDKQTIS------YKSLCDI 63 (166)
Q Consensus 40 tgh~EaV~V~yDp~~is------~~~Ll~~ 63 (166)
+|.-|++.|..||+.+. +++|+-.
T Consensus 83 nG~~ev~~I~Idp~lldpeD~E~LeDLI~a 112 (143)
T 1ybx_A 83 TGRKDIKEITIKPEVVDPDDVEMLQDLILA 112 (143)
T ss_dssp ETTCCEEEEEECGGGCCTTCHHHHHHHHHH
T ss_pred ecCceEEEEEECHHHcCCcCHHHHHHHHHH
Confidence 67889999999999985 5555543
No 51
>2f40_A Hypothetical protein PF1455; protein structure prediction, residual dipolar couplings, PY furious, simulated annealing, structural genomics; NMR {Pyrococcus furiosus} SCOP: i.11.1.1
Probab=31.59 E-value=13 Score=25.99 Aligned_cols=22 Identities=14% Similarity=0.249 Sum_probs=18.4
Q ss_pred CcEEEEEEEEcCCCCCHHHHHH
Q 040846 41 GHTEAVKVFYDKQTISYKSLCD 62 (166)
Q Consensus 41 gh~EaV~V~yDp~~is~~~Ll~ 62 (166)
|.+-.-.|.||+++++-++||+
T Consensus 43 gYAk~g~ViFDe~kl~~e~lLe 64 (96)
T 2f40_A 43 PYAKVAEVVIDDSKVNIEELKE 64 (96)
T ss_dssp TTTTCCEEECCBCSCSHHHHHH
T ss_pred cccccceEEECcccCCHHHHHH
Confidence 3445556999999999999999
No 52
>1ylf_A RRF2 family protein; structural genomics, transcription regulator, P protein structure initiative; 2.50A {Bacillus cereus atcc 14579} SCOP: a.4.5.55
Probab=31.24 E-value=16 Score=26.54 Aligned_cols=38 Identities=18% Similarity=0.314 Sum_probs=25.3
Q ss_pred hhhhccC--CCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 6 ESAFGRL--NGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 6 E~~f~~l--~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
++++..| .|++.++-| .|| .++.=+|+.||+.++++.+
T Consensus 48 ~kil~~L~~~Glv~s~rG-~GG--------------------y~L~~~p~~Itl~dVi~a~ 87 (149)
T 1ylf_A 48 RKIMSYLKQAGFVYVNRG-PGG--------------------AGLLKDLHEITLLDVYHAV 87 (149)
T ss_dssp HHHHHHHHHTTSEEEC----CC--------------------EEESSCGGGCBHHHHHHHH
T ss_pred HHHHHHHHHCCcEEEccC-CCc--------------------eEeCCChhhCcHHHHHHHH
Confidence 4455555 688888888 666 3355678899999999865
No 53
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=31.14 E-value=22 Score=21.01 Aligned_cols=21 Identities=19% Similarity=0.196 Sum_probs=16.5
Q ss_pred chhhhhccCCCceEeeeeecCC
Q 040846 4 DLESAFGRLNGVMRTATGYCGG 25 (166)
Q Consensus 4 ~~E~~f~~l~GV~~t~~GYagG 25 (166)
.+|..+.++ ||.+..+-+..+
T Consensus 18 ~i~~~l~~~-gv~~~~v~~~~~ 38 (67)
T 2kyz_A 18 RISKALEEL-GVKNYEVSVEEK 38 (67)
T ss_dssp HHHHHHHHH-TCSEEEEETTTT
T ss_pred HHHHHHHHc-CCeEEEEECCCC
Confidence 467888999 999888876644
No 54
>1j8b_A YBAB; hypothetical protein, structural genomics, structure function project, S2F, unknown function; HET: MSE; 1.75A {Haemophilus influenzae RD} SCOP: d.222.1.1 PDB: 1pug_A
Probab=29.72 E-value=13 Score=26.56 Aligned_cols=16 Identities=13% Similarity=0.241 Sum_probs=14.8
Q ss_pred CCcEEEEEEEEcCCCC
Q 040846 40 TGHTEAVKVFYDKQTI 55 (166)
Q Consensus 40 tgh~EaV~V~yDp~~i 55 (166)
+|+-|++.|..||+.+
T Consensus 50 ~G~~ev~~i~Idp~~~ 65 (112)
T 1j8b_A 50 NGAHNCRRIDIDPSLM 65 (112)
T ss_dssp ETTCCEEEEEECGGGG
T ss_pred ecCceEEEEEECHHHH
Confidence 6788999999999998
No 55
>3pvh_A UPF0603 protein AT1G54780, chloroplastic; TAP domain, rossman fold, acid phosphatase, arabidopsis THAL thylakoid lumen, hydrolase; 1.60A {Arabidopsis thaliana} PDB: 3pw9_A 3ptj_A
Probab=26.39 E-value=1.5e+02 Score=21.59 Aligned_cols=50 Identities=4% Similarity=-0.161 Sum_probs=40.1
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCceEEEEEecCCC-ccccchhHHHHHHhCCc
Q 040846 91 CNEEERKQAQESKIRRQMKLNKRIVTKIIQFDSE-FCMAENQFQKYYLQKCC 141 (166)
Q Consensus 91 ~~~eq~~~a~~~~~~~~~~~~~~i~teI~p~~~~-F~~AE~yHQ~Y~~k~p~ 141 (166)
.++++++..++.+.+++++.+..|++.+.+-- . =..+|+|=++.+.+...
T Consensus 25 Ls~~~~~~l~~~l~~le~~t~~qi~Vvtv~~~-~~g~~i~~~A~~l~~~wgi 75 (153)
T 3pvh_A 25 LSRVTKSDLKKLLSDLEYRKKLRLNFITVRKL-TSKADAFEYADQVLEKWYP 75 (153)
T ss_dssp SCHHHHHHHHHHHHHHHHHHCCEEEEEEESCC-SSSCCHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHHhhCCEEEEEEEcCC-CCCCCHHHHHHHHHHHhCC
Confidence 47788888888999999888888888877755 5 36899999999998653
No 56
>2bps_A YUKD protein; ubiquitin-like protein, ubiquitin; 2.7A {Bacillus subtilis}
Probab=26.15 E-value=34 Score=23.13 Aligned_cols=39 Identities=13% Similarity=0.168 Sum_probs=25.5
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCCCCCCCCCCCceeeecc
Q 040846 52 KQTISYKSLCDIFWETHDPTNRNYLNFGLSTHLKSAIYY 90 (166)
Q Consensus 52 p~~is~~~Ll~~f~~~~dPt~~~~Qg~d~G~qYrs~I~~ 90 (166)
|..+|..+|++..|++.+....+.-|+.+.-.-...++.
T Consensus 24 P~~~tvK~Li~~l~ea~~l~~~~~~~~~irv~NK~~~L~ 62 (81)
T 2bps_A 24 SDYHPVKKVIDIAWQAQSVSMPPREGHWIRVVNKDKVFS 62 (81)
T ss_dssp ETTSBTTHHHHHHHHHSCCCSCCCTTCEEEEGGGTEEEE
T ss_pred CCchhHHHHHHHHHHHhCCCcCCCCCCEEEEecCCEEEc
Confidence 788999999999999987665443334333333344443
No 57
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=25.62 E-value=23 Score=20.73 Aligned_cols=23 Identities=17% Similarity=0.361 Sum_probs=18.4
Q ss_pred cchhhhhccCCCceEeeeeecCC
Q 040846 3 LDLESAFGRLNGVMRTATGYCGG 25 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG 25 (166)
+.+|..+.+++||.+..+-+..+
T Consensus 16 ~~i~~~l~~~~gv~~~~v~~~~~ 38 (66)
T 2roe_A 16 MAVTKALKKVPGVEKVEVSLEKG 38 (66)
T ss_dssp HHHHHHHHTSTTCCCEEECSSSC
T ss_pred HHHHHHHHcCCCeEEEEEEeCCC
Confidence 34688899999999988876655
No 58
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=24.36 E-value=17 Score=20.72 Aligned_cols=23 Identities=4% Similarity=-0.045 Sum_probs=18.0
Q ss_pred cchhhhhccCCCceEeeeeecCC
Q 040846 3 LDLESAFGRLNGVMRTATGYCGG 25 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG 25 (166)
+.+|..+.+++||.+..+-+..+
T Consensus 17 ~~i~~~l~~~~gv~~~~v~~~~~ 39 (64)
T 2xmm_A 17 EAVTKAVQNEDAQATVQVDLTSK 39 (64)
T ss_dssp HHHHHHHHHHCTTCEEEECTTTC
T ss_pred HHHHHHHhcCCCcEEEEEEecCC
Confidence 34678899999999888866644
No 59
>3e9v_A Protein BTG2; B-cell translocation gene 2, structural genomics, PSI- 2, protein structure initiative; 1.70A {Homo sapiens} SCOP: d.370.1.1 PDB: 3dju_B 3djn_B
Probab=22.49 E-value=1.9e+02 Score=20.72 Aligned_cols=66 Identities=6% Similarity=0.010 Sum_probs=45.0
Q ss_pred CHHHHHHHHHhcC-CCCCCCCCCCCCCCCceeeecc--CCHHHHHHHHHH---HHHHHhhcCCceEEEEEecCCCccc
Q 040846 56 SYKSLCDIFWETH-DPTNRNYLNFGLSTHLKSAIYY--CNEEERKQAQES---KIRRQMKLNKRIVTKIIQFDSEFCM 127 (166)
Q Consensus 56 s~~~Ll~~f~~~~-dPt~~~~Qg~d~G~qYrs~I~~--~~~eq~~~a~~~---~~~~~~~~~~~i~teI~p~~~~F~~ 127 (166)
+++++|..-|+.| .|.. +.+|.-||.+..- .|+-=.+.|.++ ..++.+.++..++.-|-|.. ..|.
T Consensus 34 ~L~~~L~~~y~~HW~P~~-----P~kGsayRcIrin~~~Dp~l~~Aa~~sgl~~~~l~~~LP~eltlWvDPge-Vs~R 105 (120)
T 3e9v_A 34 ALQEALTEHYKHHWFPEK-----PSKGSGYRCIRINHKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYE-VSYR 105 (120)
T ss_dssp HHHHHHHHHHTTSCCTTS-----TTTTHHHHCEECSSSCCHHHHHHHHHTTCCHHHHHHHSCTTEEEEEETTE-EEEE
T ss_pred HHHHHHHHHHhcCCCCCC-----CCCCCceeEEEECCCCCHHHHHHHHHhCCCHHHHHHhCCcccEEEECCCE-EEEE
Confidence 3677787888877 6654 4689999986654 244444444443 24566568899999999988 6664
No 60
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=21.78 E-value=29 Score=20.65 Aligned_cols=23 Identities=13% Similarity=0.313 Sum_probs=17.9
Q ss_pred cchhhhhccCCCceEeeeeecCC
Q 040846 3 LDLESAFGRLNGVMRTATGYCGG 25 (166)
Q Consensus 3 W~~E~~f~~l~GV~~t~~GYagG 25 (166)
+.+|..+.+++||.+..+-+..+
T Consensus 19 ~~ie~~l~~~~gv~~~~v~~~~~ 41 (71)
T 2aj0_A 19 AKFERNVKEIEGVTEAIVNFGAS 41 (71)
T ss_dssp HHHHHHHHHSTTEEEEEECCSSE
T ss_pred HHHHHHHHcCCCeEEEEEECCCC
Confidence 34678899999999988866543
No 61
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=21.71 E-value=42 Score=25.01 Aligned_cols=39 Identities=23% Similarity=0.404 Sum_probs=28.9
Q ss_pred hhhhccC--CCceEeeeeecCCcCCCCCchhhccCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 040846 6 ESAFGRL--NGVMRTATGYCGGTLKKPTYREVCEGITGHTEAVKVFYDKQTISYKSLCDIF 64 (166)
Q Consensus 6 E~~f~~l--~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~EaV~V~yDp~~is~~~Ll~~f 64 (166)
++++..| .|++.++-|=.|| .++.=+|+.||+.++++.+
T Consensus 62 ~kil~~L~~aGlv~s~rG~~GG--------------------y~Lar~p~eItL~dVi~av 102 (159)
T 3lwf_A 62 EQLIGPLRNAGIVKSIRGAHGG--------------------YVLNGDPEKITAGDIIRTL 102 (159)
T ss_dssp HHHHHHHHHTTSEEEECSTTCE--------------------EEECSCTTTCBHHHHHHHH
T ss_pred HHHHHHHHHCCeEEEecCCCCc--------------------eEecCCHHHCCHHHHHHHH
Confidence 4455554 5888888776555 4466789999999999886
No 62
>2p8i_A Putative dioxygenase; YP_555069.1, structural genomics, JOIN for structural genomics, JCSG, protein structure initiative oxidoreductase; HET: MSE CIT; 1.40A {Burkholderia xenovorans} SCOP: d.58.55.1 PDB: 2nyh_A*
Probab=20.74 E-value=61 Score=23.46 Aligned_cols=29 Identities=10% Similarity=0.262 Sum_probs=24.9
Q ss_pred CCceeeeccCCHHHHHHHHHHHHHHHhhcC
Q 040846 82 THLKSAIYYCNEEERKQAQESKIRRQMKLN 111 (166)
Q Consensus 82 ~qYrs~I~~~~~eq~~~a~~~~~~~~~~~~ 111 (166)
..|-.=||+ |+++++.|++..+++.++|+
T Consensus 11 ~~yHaHVYf-d~~~~~~A~~Lre~i~~~F~ 39 (117)
T 2p8i_A 11 ASWHAHVYF-DASSRDAAWTLREQIEAHWS 39 (117)
T ss_dssp CEEEEEEEE-CGGGHHHHHHHHHHHHHHTT
T ss_pred CceEEEEec-CHHHHHHHHHHHHHHHHhcc
Confidence 467777888 89999999999999998875
Done!