BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040847
(88 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Query: 1 ELPTMHLVVINAATDGFSDFNKNGQGGFGTVCKE-------VAVKRLSRKSRQGLE-EFK 52
+L L + A+D FS+ N G+GGFG V K VAVKRL + QG E +F+
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 53 DEIILIAKLQHRNVVRLVG---CGEEKLLIYELM 83
E+ +I+ HRN++RL G E+LL+Y M
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYM 117
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 1 ELPTMHLVVINAATDGFSDFNKNGQGGFGTVCKE-------VAVKRLSRKSRQGLE-EFK 52
+L L + A+D F + N G+GGFG V K VAVKRL + QG E +F+
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 53 DEIILIAKLQHRNVVRLVG---CGEEKLLIYELM 83
E+ +I+ HRN++RL G E+LL+Y M
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYM 109
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 21 NKNGQGGFGTVCK------EVAVKRLSRKSRQGLEE----FKDEIILIAKLQHRNVVRLV 70
NK G+GGFG V K VAVK+L+ EE F EI ++AK QH N+V L+
Sbjct: 31 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 71 GC---GEEKLLIYELMP 84
G G++ L+Y MP
Sbjct: 91 GFSSDGDDLCLVYVYMP 107
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 21 NKNGQGGFGTVCK------EVAVKRLSRKSRQGLEE----FKDEIILIAKLQHRNVVRLV 70
NK G+GGFG V K VAVK+L+ EE F EI ++AK QH N+V L+
Sbjct: 37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 71 GC---GEEKLLIYELMP 84
G G++ L+Y MP
Sbjct: 97 GFSSDGDDLCLVYVYMP 113
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 21 NKNGQGGFGTVCK------EVAVKRLSRKSRQGLEE----FKDEIILIAKLQHRNVVRLV 70
NK G+GGFG V K VAVK+L+ EE F EI ++AK QH N+V L+
Sbjct: 37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 71 GC---GEEKLLIYELMP 84
G G++ L+Y MP
Sbjct: 97 GFSSDGDDLCLVYVYMP 113
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 13/77 (16%)
Query: 21 NKNGQGGFGTVCK------EVAVKRLSRKSRQGLEE----FKDEIILIAKLQHRNVVRLV 70
NK G+GGFG V K VAVK+L+ EE F EI + AK QH N+V L+
Sbjct: 28 NKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELL 87
Query: 71 GC---GEEKLLIYELMP 84
G G++ L+Y P
Sbjct: 88 GFSSDGDDLCLVYVYXP 104
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 11/67 (16%)
Query: 17 FSDFNKNGQGGFGTV--------CKEVAVKRLSRKSRQGLEEFKD---EIILIAKLQHRN 65
FSD + G G FG V + VA+K++S +Q E+++D E+ + KL+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 66 VVRLVGC 72
++ GC
Sbjct: 116 TIQYRGC 122
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 11/67 (16%)
Query: 17 FSDFNKNGQGGFGTV--------CKEVAVKRLSRKSRQGLEEFKD---EIILIAKLQHRN 65
FSD + G G FG V + VA+K++S +Q E+++D E+ + KL+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 66 VVRLVGC 72
++ GC
Sbjct: 77 TIQYRGC 83
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 16/76 (21%)
Query: 24 GQGGFGTV----CKE---------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLV 70
G+G FG V C VAVK L S ++F+ E L+ LQH+++VR
Sbjct: 27 GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFF 86
Query: 71 G-CGEEK--LLIYELM 83
G C E + L+++E M
Sbjct: 87 GVCTEGRPLLMVFEYM 102
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 16/76 (21%)
Query: 24 GQGGFGTV----CKE---------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLV 70
G+G FG V C VAVK L S ++F+ E L+ LQH+++VR
Sbjct: 21 GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFF 80
Query: 71 G-CGEEK--LLIYELM 83
G C E + L+++E M
Sbjct: 81 GVCTEGRPLLMVFEYM 96
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 16/76 (21%)
Query: 24 GQGGFGTV----CKE---------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLV 70
G+G FG V C VAVK L S ++F+ E L+ LQH+++VR
Sbjct: 50 GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFF 109
Query: 71 G-CGEEK--LLIYELM 83
G C E + L+++E M
Sbjct: 110 GVCTEGRPLLMVFEYM 125
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 22 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 81
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 82 VCYSAGRRNLKLIMEFLP 99
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 50 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 109
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 110 VCYSAGRRNLKLIMEYLP 127
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 19 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 78
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 79 VCYSAGRRNLKLIMEYLP 96
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 22 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 81
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 82 VCYSAGRRNLKLIMEYLP 99
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 18 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 77
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 78 VCYSAGRRNLKLIMEYLP 95
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 19 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 78
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 79 VCYSAGRRNLKLIMEYLP 96
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 23 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 82
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 83 VCYSAGRRNLKLIMEYLP 100
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 25 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 84
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 85 VCYSAGRRNLKLIMEYLP 102
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 20 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 79
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 80 VCYSAGRRNLKLIMEYLP 97
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 24 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 83
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 84 VCYSAGRRNLKLIMEYLP 101
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 26 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 85
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 86 VCYSAGRRNLKLIMEYLP 103
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 22 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 81
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 82 VCYSAGRRNLKLIMEYLP 99
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 17 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 76
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 77 VCYSAGRRNLKLIMEYLP 94
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 19 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 78
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 79 VCYSAGRRNLKLIMEYLP 96
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 37 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 96
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 97 VCYSAGRRNLKLIMEYLP 114
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 4 TMHLVVINAATDGFSD-FNKNGQGGFGTVC--------KEVAVKRLSRKSRQGLEEFKDE 54
+ LVV + D F K G+G G VC K VAVK++ + +Q E +E
Sbjct: 17 ALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE 76
Query: 55 IILIAKLQHRNVVRLVG---CGEEKLLIYELM 83
++++ QH NVV + G+E ++ E +
Sbjct: 77 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 108
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 4 TMHLVVINAATDGFSD-FNKNGQGGFGTVC--------KEVAVKRLSRKSRQGLEEFKDE 54
+ LVV + D F K G+G G VC K VAVK++ + +Q E +E
Sbjct: 62 ALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE 121
Query: 55 IILIAKLQHRNVVRLVGC---GEEKLLIYELM 83
++++ QH NVV + G+E ++ E +
Sbjct: 122 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 24 GQGGFGTV--CKE----------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG+V C+ VAVK+L + + L +F+ EI ++ LQH N+V+ G
Sbjct: 37 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 96
Query: 72 ----CGEEKL-LIYELMP 84
G L LI E +P
Sbjct: 97 VCYSAGRRNLKLIMEYLP 114
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 4 TMHLVVINAATDGFSD-FNKNGQGGFGTVC--------KEVAVKRLSRKSRQGLEEFKDE 54
+ LVV + D F K G+G G VC K VAVK++ + +Q E +E
Sbjct: 139 ALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE 198
Query: 55 IILIAKLQHRNVVRLVGC---GEEKLLIYELM 83
++++ QH NVV + G+E ++ E +
Sbjct: 199 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 4 TMHLVVINAATDGFSD-FNKNGQGGFGTVC--------KEVAVKRLSRKSRQGLEEFKDE 54
+ LVV + D F K G+G G VC K VAVK++ + +Q E +E
Sbjct: 19 ALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE 78
Query: 55 IILIAKLQHRNVVRLVGC---GEEKLLIYELM 83
++++ QH NVV + G+E ++ E +
Sbjct: 79 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 110
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 4 TMHLVVINAATDGFSD-FNKNGQGGFGTVC--------KEVAVKRLSRKSRQGLEEFKDE 54
+ LVV + D F K G+G G VC K VAVK++ + +Q E +E
Sbjct: 8 ALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE 67
Query: 55 IILIAKLQHRNVVRLVG---CGEEKLLIYELM 83
++++ QH NVV + G+E ++ E +
Sbjct: 68 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 99
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 17 FSDFNKNGQGGFGTVC--------KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVR 68
+F K G+G G VC K VAVK++ + +Q E +E++++ QH NVV
Sbjct: 26 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 69 LVG---CGEEKLLIYELM 83
+ G+E ++ E +
Sbjct: 86 MYNSYLVGDELWVVMEFL 103
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 17 FSDFNKNGQGGFGTVC--------KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVR 68
++F K G+G G VC K+VAVK++ + +Q E +E++++ H NVV
Sbjct: 47 LANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 69 LVG---CGEEKLLIYELM 83
+ G+E ++ E +
Sbjct: 107 MYSSYLVGDELWVVMEFL 124
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 29 GTVCKEVAVKRLSRKSRQGL-EEFKDEIILIAKLQHRNVVRLVG 71
G + VA+K L K+ L EEF+ E +L A+LQH NVV L+G
Sbjct: 53 GEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLG 96
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 29 GTVCKEVAVKRLSRKSRQGL-EEFKDEIILIAKLQHRNVVRLVG 71
G + VA+K L K+ L EEF+ E +L A+LQH NVV L+G
Sbjct: 36 GEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLG 79
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 15/77 (19%)
Query: 24 GQGGFGTVCK------------EVAVKRLSRKS-RQGLEEFKDEIILIAKLQHRNVVRLV 70
G G FGTV K VA+K L+ + + EF DE +++A + H ++VRL+
Sbjct: 24 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 83
Query: 71 G-CGEEKL-LIYELMPQ 85
G C + L+ +LMP
Sbjct: 84 GVCLSPTIQLVTQLMPH 100
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 15/77 (19%)
Query: 24 GQGGFGTVCK------------EVAVKRLSRKS-RQGLEEFKDEIILIAKLQHRNVVRLV 70
G G FGTV K VA+K L+ + + EF DE +++A + H ++VRL+
Sbjct: 47 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 106
Query: 71 G-CGEEKL-LIYELMPQ 85
G C + L+ +LMP
Sbjct: 107 GVCLSPTIQLVTQLMPH 123
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 16/76 (21%)
Query: 24 GQGGFGTV--------CKE-----VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLV 70
G+G FG V C E VAVK L S ++F E L+ LQH ++V+
Sbjct: 22 GEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFY 81
Query: 71 GC---GEEKLLIYELM 83
G G+ ++++E M
Sbjct: 82 GVCVEGDPLIMVFEYM 97
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 24 GQGGFGTVCK-----EVAVKRL--SRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FGTV K +VAVK L + + Q L+ FK+E+ ++ K +H N++ +G
Sbjct: 17 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 24 GQGGFGTVCK-----EVAVKRL--SRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FGTV K +VAVK L + + Q L+ FK+E+ ++ K +H N++ +G
Sbjct: 17 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 24 GQGGFGTVCK-----EVAVKRL--SRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FGTV K +VAVK L + + Q L+ FK+E+ ++ K +H N++ +G
Sbjct: 17 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 34.7 bits (78), Expect = 0.013, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 1 ELPTMHLVVINAATDG------FSDFN---KNGQGGFGTVCK------EVAVKRLSRKS- 44
++PT + A DG + D N K G G FGTV + +VAVK L +
Sbjct: 14 DIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDF 73
Query: 45 -RQGLEEFKDEIILIAKLQHRNVVRLVG 71
+ + EF E+ ++ +L+H N+V +G
Sbjct: 74 HAERVNEFLREVAIMKRLRHPNIVLFMG 101
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 34.7 bits (78), Expect = 0.013, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 1 ELPTMHLVVINAATDG------FSDFN---KNGQGGFGTVCK------EVAVKRLSRKS- 44
++PT + A DG + D N K G G FGTV + +VAVK L +
Sbjct: 14 DIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDF 73
Query: 45 -RQGLEEFKDEIILIAKLQHRNVVRLVG 71
+ + EF E+ ++ +L+H N+V +G
Sbjct: 74 HAERVNEFLREVAIMKRLRHPNIVLFMG 101
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 34.7 bits (78), Expect = 0.015, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 24 GQGGFGTVCK-----EVAVKRL--SRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FGTV K +VAVK L + + Q L+ FK+E+ ++ K +H N++ +G
Sbjct: 22 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 34.7 bits (78), Expect = 0.015, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 24 GQGGFGTVCK-----EVAVKRL--SRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FGTV K +VAVK L + + Q L+ FK+E+ ++ K +H N++ +G
Sbjct: 19 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 34.7 bits (78), Expect = 0.015, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 24 GQGGFGTVCK-----EVAVKRL--SRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FGTV K +VAVK L + + Q L+ FK+E+ ++ K +H N++ +G
Sbjct: 22 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By
5z-7-oxozeaenol
Length = 315
Score = 34.7 bits (78), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 8/54 (14%)
Query: 24 GQGGFGTVC------KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG VC K+VA+K++ +S + + F E+ ++++ H N+V+L G
Sbjct: 18 GRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG 69
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 34.7 bits (78), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 8/54 (14%)
Query: 24 GQGGFGTVC------KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG VC K+VA+K++ +S + + F E+ ++++ H N+V+L G
Sbjct: 17 GRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG 68
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Query: 7 LVVINAATDGFSDFNKNGQGGFGTVCK-------EVAVKRLSRKSRQGLEEFKDEIILIA 59
LV + AT+ F G G FG V K +VA+KR + +S QG+EEF+ EI ++
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 60 KLQHRNVVRLVG-CGE--EKLLIYELM 83
+H ++V L+G C E E +LIY+ M
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYM 117
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 24 GQGGFGTVCK-----EVAVKRL--SRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FGTV K +VAVK L + + Q L+ FK+E+ ++ K +H N++ +G
Sbjct: 21 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 24 GQGGFGTVCK-----EVAVKRL--SRKSRQGLEEFKDEIILIAKLQHRNVVRLVGCGEEK 76
G G FGTV K +VAVK L + + Q L+ FK+E+ ++ K +H N++ +G
Sbjct: 33 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG----- 87
Query: 77 LLIYELMPQ 85
Y PQ
Sbjct: 88 ---YSTAPQ 93
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 17 FSDFNKNGQGGFGTVC--------KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVR 68
+ K G+G G VC ++VAVK + + +Q E +E++++ QH NVV
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 69 LVG---CGEEKLLIYELM 83
+ GEE ++ E +
Sbjct: 107 MYKSYLVGEELWVLMEFL 124
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Query: 7 LVVINAATDGFSDFNKNGQGGFGTVCK-------EVAVKRLSRKSRQGLEEFKDEIILIA 59
LV + AT+ F G G FG V K +VA+KR + +S QG+EEF+ EI ++
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 60 KLQHRNVVRLVG-CGE--EKLLIYELM 83
+H ++V L+G C E E +LIY+ M
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYM 117
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 34.3 bits (77), Expect = 0.016, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V + +VAVK L S Q +F E ++I+KL H+N+VR
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRC 99
Query: 70 VGCGEEKL---LIYELM 83
+G + L ++ ELM
Sbjct: 100 IGVSLQSLPRFILLELM 116
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.3 bits (77), Expect = 0.016, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V + +VAVK L S Q +F E ++I+KL H+N+VR
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRC 113
Query: 70 VGCGEEKL---LIYELM 83
+G + L ++ ELM
Sbjct: 114 IGVSLQSLPRFILLELM 130
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 34.3 bits (77), Expect = 0.017, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 24 GQGGFGTVCK-----EVAVKRL--SRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FGTV K +VAVK L + + Q L+ FK+E+ ++ K +H N++ +G
Sbjct: 37 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 34.3 bits (77), Expect = 0.017, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 24 GQGGFGTVCK-----EVAVKRL--SRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FGTV K +VAVK L + + Q L+ FK+E+ ++ K +H N++ +G
Sbjct: 44 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 34.3 bits (77), Expect = 0.017, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 24 GQGGFGTVCK-----EVAVKRL--SRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FGTV K +VAVK L + + Q L+ FK+E+ ++ K +H N++ +G
Sbjct: 45 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In
Complex With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In
Complex With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With
A Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With
A Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An
Bromopyridine Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An
Bromopyridine Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With
A Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With
A Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 34.3 bits (77), Expect = 0.017, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 24 GQGGFGTVCK-----EVAVKRL--SRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FGTV K +VAVK L + + Q L+ FK+E+ ++ K +H N++ +G
Sbjct: 45 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 24 GQGGFGTVCK-----EVAVKRL--SRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FGTV K +VAVK L + + Q L+ FK+E+ ++ K +H N++ +G
Sbjct: 33 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 21 NKNGQGGFGTVCKEV--------AVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVGC 72
N G+G +G V V A K++ + + ++ FK EI ++ L H N++RL
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 73 GEEKLLIYELM 83
E+ IY +M
Sbjct: 75 FEDNTDIYLVM 85
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 21 NKNGQGGFGTVCKEV--------AVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVGC 72
N G+G +G V V A K++ + + ++ FK EI ++ L H N++RL
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 91
Query: 73 GEEKLLIYELM 83
E+ IY +M
Sbjct: 92 FEDNTDIYLVM 102
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain
Bound To Appcp From D. Discoideum
Length = 287
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 15/63 (23%)
Query: 24 GQGGFGTVCKE--------VAVKRLSRKSRQG-------LEEFKDEIILIAKLQHRNVVR 68
G+GGFG V K VA+K L +G +EF+ E+ +++ L H N+V+
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 69 LVG 71
L G
Sbjct: 88 LYG 90
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 22 KNGQGGFGTVCKEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVGCGEEKLLIYE 81
K+ + G V KE+ + R+S K R EE + E+ ++A ++H N+V+ EE +Y
Sbjct: 44 KSTEDGRQYVIKEINISRMSSKER---EESRREVAVLANMKHPNIVQYRESFEENGSLYI 100
Query: 82 LM 83
+M
Sbjct: 101 VM 102
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase
Domain From D. Discoideum Bound To Appcp
Length = 287
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 15/63 (23%)
Query: 24 GQGGFGTVCKE--------VAVKRLSRKSRQG-------LEEFKDEIILIAKLQHRNVVR 68
G+GGFG V K VA+K L +G +EF+ E+ +++ L H N+V+
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 69 LVG 71
L G
Sbjct: 88 LYG 90
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 15/63 (23%)
Query: 24 GQGGFGTVCKE--------VAVKRLSRKSRQG-------LEEFKDEIILIAKLQHRNVVR 68
G+GGFG V K VA+K L +G +EF+ E+ +++ L H N+V+
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 69 LVG 71
L G
Sbjct: 88 LYG 90
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 33.5 bits (75), Expect = 0.034, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 10/57 (17%)
Query: 24 GQGGFGTVC--------KEVAVKRLSR--KSRQGLEEFKDEIILIAKLQHRNVVRLV 70
G G +G+VC ++VA+K+LSR +S + E++L+ +QH NV+ L+
Sbjct: 33 GSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 33.1 bits (74), Expect = 0.036, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 13/61 (21%)
Query: 24 GQGGFGTVCK-----------EVAVK--RLSRKSRQGLEEFKDEIILIAKLQHRNVVRLV 70
G+G FG+V + +VAVK +L S++ +EEF E + H NV+RL+
Sbjct: 43 GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLL 102
Query: 71 G 71
G
Sbjct: 103 G 103
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.1 bits (74), Expect = 0.040, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSR-KSRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V + +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRC 113
Query: 70 VGCGEEKL---LIYELM 83
+G + L ++ ELM
Sbjct: 114 IGVSLQSLPRFILLELM 130
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.1 bits (74), Expect = 0.044, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V + +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 113
Query: 70 VGCGEEKL---LIYELM 83
+G + L ++ ELM
Sbjct: 114 IGVSLQSLPRFILMELM 130
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 33.1 bits (74), Expect = 0.044, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V + +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 39 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 70 VGCGEEKL---LIYELM 83
+G + L ++ ELM
Sbjct: 99 IGVSLQSLPRFILMELM 115
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 33.1 bits (74), Expect = 0.045, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V + +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 99
Query: 70 VGCGEEKL---LIYELM 83
+G + L ++ ELM
Sbjct: 100 IGVSLQSLPRFILLELM 116
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 33.1 bits (74), Expect = 0.045, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V + +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 99
Query: 70 VGCGEEKL---LIYELM 83
+G + L ++ ELM
Sbjct: 100 IGVSLQSLPRFILLELM 116
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 33.1 bits (74), Expect = 0.045, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V + +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 66 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 125
Query: 70 VGCGEEKL---LIYELM 83
+G + L ++ ELM
Sbjct: 126 IGVSLQSLPRFILLELM 142
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 33.1 bits (74), Expect = 0.045, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V + +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 46 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 105
Query: 70 VGCGEEKL---LIYELM 83
+G + L ++ ELM
Sbjct: 106 IGVSLQSLPRFILLELM 122
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 33.1 bits (74), Expect = 0.045, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V + +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 56 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 115
Query: 70 VGCGEEKL---LIYELM 83
+G + L ++ ELM
Sbjct: 116 IGVSLQSLPRFILLELM 132
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 33.1 bits (74), Expect = 0.045, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V + +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 39 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 70 VGCGEEKL---LIYELM 83
+G + L ++ ELM
Sbjct: 99 IGVSLQSLPRFILLELM 115
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 33.1 bits (74), Expect = 0.045, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V + +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 57 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 116
Query: 70 VGCGEEKL---LIYELM 83
+G + L ++ ELM
Sbjct: 117 IGVSLQSLPRFILLELM 133
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 33.1 bits (74), Expect = 0.045, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V + +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 80 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 139
Query: 70 VGCGEEKL---LIYELM 83
+G + L ++ ELM
Sbjct: 140 IGVSLQSLPRFILLELM 156
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 33.1 bits (74), Expect = 0.045, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V + +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 31 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 90
Query: 70 VGCGEEKL---LIYELM 83
+G + L ++ ELM
Sbjct: 91 IGVSLQSLPRFILLELM 107
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 15/76 (19%)
Query: 24 GQGGFGTVCK------------EVAVKRLSRKS-RQGLEEFKDEIILIAKLQHRNVVRLV 70
G G FGTV K V +K + KS RQ + D ++ I L H ++VRL+
Sbjct: 40 GSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLL 99
Query: 71 GC--GEEKLLIYELMP 84
G G L+ + +P
Sbjct: 100 GLCPGSSLQLVTQYLP 115
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 15/76 (19%)
Query: 24 GQGGFGTVCK------------EVAVKRLSRKS-RQGLEEFKDEIILIAKLQHRNVVRLV 70
G G FGTV K V +K + KS RQ + D ++ I L H ++VRL+
Sbjct: 22 GSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLL 81
Query: 71 GC--GEEKLLIYELMP 84
G G L+ + +P
Sbjct: 82 GLCPGSSLQLVTQYLP 97
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 10/57 (17%)
Query: 24 GQGGFGTVC--------KEVAVKRLSR--KSRQGLEEFKDEIILIAKLQHRNVVRLV 70
G G +G+VC ++VA+K+LSR +S + E++L+ +QH NV+ L+
Sbjct: 51 GSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 32.7 bits (73), Expect = 0.056, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 24 GQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLV 70
G G FG V K A K + KS + LE++ EI ++A H N+V+L+
Sbjct: 46 GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 32.7 bits (73), Expect = 0.059, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 24 GQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLV 70
G G FG V K A K + KS + LE++ EI ++A H N+V+L+
Sbjct: 46 GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 32.7 bits (73), Expect = 0.059, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 24 GQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLV 70
G G FG V K A K + KS + LE++ EI ++A H N+V+L+
Sbjct: 46 GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 32.3 bits (72), Expect = 0.065, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
Query: 12 AATDGFSDFNKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFK-DEIILIAKLQ 62
+++ F K G G + TV K VA+K + S +G EI L+ +L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 63 HRNVVRL--VGCGEEKL-LIYELM 83
H N+VRL V E KL L++E M
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFM 85
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 32.0 bits (71), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 19/83 (22%)
Query: 20 FNKN-GQGGFGTVCK---------------EVAVKRLSRKSRQGLEEFKDEIILIAKLQH 63
FN++ GQG F + K EV +K L + R E F + +++KL H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 64 RNVVRLVG---CGEEKLLIYELM 83
+++V G CG+E +L+ E +
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFV 94
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 32.0 bits (71), Expect = 0.096, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVR 68
F + GQG FG V K A+K++ R + + L E++L+A L H+ VVR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVR 66
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type Complexed With Atp
Length = 303
Score = 32.0 bits (71), Expect = 0.096, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVR 68
F + GQG FG V K A+K++ R + + L E++L+A L H+ VVR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVR 66
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 32.0 bits (71), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 16/76 (21%)
Query: 24 GQGGFGTV----CKE---------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLV 70
G+G FG V C VAVK L + ++F+ E L+ LQH ++V+
Sbjct: 24 GEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFY 83
Query: 71 GC---GEEKLLIYELM 83
G G+ ++++E M
Sbjct: 84 GVCGDGDPLIMVFEYM 99
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 32.0 bits (71), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 19/83 (22%)
Query: 20 FNKN-GQGGFGTVCK---------------EVAVKRLSRKSRQGLEEFKDEIILIAKLQH 63
FN++ GQG F + K EV +K L + R E F + +++KL H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 64 RNVVRLVG---CGEEKLLIYELM 83
+++V G CG+E +L+ E +
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFV 94
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 24 GQGGFGTVCK--------EVAVKRLSRKSRQ-GLEEFKDEIILIAKLQHRNVVRLVGCGE 74
G+GGFG V + A+KR+ +R+ E+ E+ +AKL+H +VR
Sbjct: 14 GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWL 73
Query: 75 EKLLIYELMP 84
EK +L P
Sbjct: 74 EKNTTEKLQP 83
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 24 GQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FG V K A K + KS + LE++ EI ++A H +V+L+G
Sbjct: 20 GDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 75
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
Length = 303
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVR 68
F + GQG FG V K A+K++ R + + L E+ L+A L H+ VVR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVR 66
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 30.8 bits (68), Expect = 0.21, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 24 GQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FG V K A K + KS + LE++ EI ++A H +V+L+G
Sbjct: 28 GDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 83
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 30.8 bits (68), Expect = 0.22, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTVCKE-------------VAVKRLSRKSRQGLE-EFKDEIILIAKLQHRNVVRL 69
G+G FG V + VAVK L ++ ++ +F+ E L+A+ + N+V+L
Sbjct: 56 GEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKL 115
Query: 70 VG---CGEEKLLIYELM 83
+G G+ L++E M
Sbjct: 116 LGVCAVGKPMCLLFEYM 132
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 8 VVINAATDGFSDFNKN----GQGGFGTV--CK------EVAVKRLSR---KSRQGLEEFK 52
+ + +T FSD K G+G FG V CK E AVK +S+ K + E
Sbjct: 21 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 53 DEIILIAKLQHRNVVRLVGCGEEKLLIY 80
E+ L+ +L H N+++L E+K Y
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYFY 108
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 30.4 bits (67), Expect = 0.24, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 14/75 (18%)
Query: 24 GQGGFGTVCK-----------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG V + VAVK + + E+F E +++ L H ++V+L+G
Sbjct: 33 GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG 92
Query: 72 CGEEK--LLIYELMP 84
EE+ +I EL P
Sbjct: 93 IIEEEPTWIIMELYP 107
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 30.4 bits (67), Expect = 0.24, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 14/75 (18%)
Query: 24 GQGGFGTVCK-----------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG V + VAVK + + E+F E +++ L H ++V+L+G
Sbjct: 17 GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG 76
Query: 72 CGEEK--LLIYELMP 84
EE+ +I EL P
Sbjct: 77 IIEEEPTWIIMELYP 91
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 30.4 bits (67), Expect = 0.24, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 14/75 (18%)
Query: 24 GQGGFGTVCK-----------EVAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG V + VAVK + + E+F E +++ L H ++V+L+G
Sbjct: 21 GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG 80
Query: 72 CGEEK--LLIYELMP 84
EE+ +I EL P
Sbjct: 81 IIEEEPTWIIMELYP 95
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 20/98 (20%)
Query: 3 PTMHL-----VVINAATDGFSDFNKN----GQGGFGTV--CK------EVAVKRLSR--- 42
P HL + + +T FSD K G+G FG V CK E AVK +S+
Sbjct: 28 PGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV 87
Query: 43 KSRQGLEEFKDEIILIAKLQHRNVVRLVGCGEEKLLIY 80
K + E E+ L+ +L H N+++L E+K Y
Sbjct: 88 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 125
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 8 VVINAATDGFSDFNKN----GQGGFGTV--CK------EVAVKRLSR---KSRQGLEEFK 52
+ + +T FSD K G+G FG V CK E AVK +S+ K + E
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 53 DEIILIAKLQHRNVVRLVGCGEEKLLIY 80
E+ L+ +L H N+++L E+K Y
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYFY 102
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 20/98 (20%)
Query: 3 PTMHL-----VVINAATDGFSDFNKN----GQGGFGTV--CK------EVAVKRLSR--- 42
P HL + + +T FSD K G+G FG V CK E AVK +S+
Sbjct: 29 PGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV 88
Query: 43 KSRQGLEEFKDEIILIAKLQHRNVVRLVGCGEEKLLIY 80
K + E E+ L+ +L H N+++L E+K Y
Sbjct: 89 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 126
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTV--CKEVAV----------KRLSRKSRQGL--EEFKDEIILIAKLQHRNVVRL 69
G G F V C+E + KR ++ SR+G+ E+ + E+ ++ ++QH NV+ L
Sbjct: 20 GSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 70 VGCGEEK---LLIYELM 83
E K +LI EL+
Sbjct: 80 HEVYENKTDVILILELV 96
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain
Of Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTV--CKEVAV----------KRLSRKSRQGL--EEFKDEIILIAKLQHRNVVRL 69
G G F V C+E + KR ++ SR+G+ E+ + E+ ++ ++QH NV+ L
Sbjct: 19 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 78
Query: 70 VGCGEEK---LLIYELM 83
E K +LI EL+
Sbjct: 79 HEVYENKTDVILILELV 95
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTV--CKEVAV----------KRLSRKSRQGL--EEFKDEIILIAKLQHRNVVRL 69
G G F V C+E + KR ++ SR+G+ E+ + E+ ++ ++QH NV+ L
Sbjct: 19 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 78
Query: 70 VGCGEEK---LLIYELM 83
E K +LI EL+
Sbjct: 79 HEVYENKTDVILILELV 95
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTV--CKEVAV----------KRLSRKSRQGL--EEFKDEIILIAKLQHRNVVRL 69
G G F V C+E + KR ++ SR+G+ E+ + E+ ++ ++QH NV+ L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 70 VGCGEEK---LLIYELM 83
E K +LI EL+
Sbjct: 80 HEVYENKTDVILILELV 96
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTV--CKEVAV----------KRLSRKSRQGL--EEFKDEIILIAKLQHRNVVRL 69
G G F V C+E + KR ++ SR+G+ E+ + E+ ++ ++QH NV+ L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 70 VGCGEEK---LLIYELM 83
E K +LI EL+
Sbjct: 80 HEVYENKTDVILILELV 96
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 30.0 bits (66), Expect = 0.30, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLS-RKSRQGLEEFK-DEIILIAKLQHRNV 66
+ K G+G +GTV K VA+KR+ +G+ EI L+ +L+H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 67 VRL--VGCGEEKL-LIYELMPQ 85
VRL V ++KL L++E Q
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQ 85
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTV--CKEVAV----------KRLSRKSRQGL--EEFKDEIILIAKLQHRNVVRL 69
G G F V C+E + KR ++ SR+G+ E+ + E+ ++ ++QH NV+ L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 70 VGCGEEK---LLIYELM 83
E K +LI EL+
Sbjct: 80 HEVYENKTDVILILELV 96
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 3 PTMHLVVI--NAATDGFSDFNKN---GQGGFGTV--CKE------VAVKRLSRKSRQGLE 49
P H +V A + F +K G G FG V C+E +A K + + + E
Sbjct: 72 PFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE 131
Query: 50 EFKDEIILIAKLQHRNVVRLVGCGEEK 76
E K+EI ++ +L H N+++L E K
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESK 158
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTV--CKEVAV----------KRLSRKSRQGL--EEFKDEIILIAKLQHRNVVRL 69
G G F V C+E + KR ++ SR+G+ E+ + E+ ++ ++QH NV+ L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 70 VGCGEEK---LLIYELM 83
E K +LI EL+
Sbjct: 80 HEVYENKTDVILILELV 96
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTV--CKEVAV----------KRLSRKSRQGL--EEFKDEIILIAKLQHRNVVRL 69
G G F V C+E + KR ++ SR+G+ E+ + E+ ++ ++QH NV+ L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 70 VGCGEEK---LLIYELM 83
E K +LI EL+
Sbjct: 80 HEVYENKTDVILILELV 96
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1)
In Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTV--CKEVAV----------KRLSRKSRQGL--EEFKDEIILIAKLQHRNVVRL 69
G G F V C+E + KR ++ SR+G+ E+ + E+ ++ ++QH NV+ L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 70 VGCGEEK---LLIYELM 83
E K +LI EL+
Sbjct: 80 HEVYENKTDVILILELV 96
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTV--CKEVAV----------KRLSRKSRQGL--EEFKDEIILIAKLQHRNVVRL 69
G G F V C+E + KR ++ SR+G+ E+ + E+ ++ ++QH NV+ L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 70 VGCGEEK---LLIYELM 83
E K +LI EL+
Sbjct: 80 HEVYENKTDVILILELV 96
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTV--CKEVAV----------KRLSRKSRQGL--EEFKDEIILIAKLQHRNVVRL 69
G G F V C+E + KR ++ SR+G+ E+ + E+ ++ ++QH NV+ L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 70 VGCGEEK---LLIYELM 83
E K +LI EL+
Sbjct: 80 HEVYENKTDVILILELV 96
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 30.0 bits (66), Expect = 0.35, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 17 FSDFNKNGQGGFGTVCKEVAVKRLS------RKSRQGLEEFKDEIILIAKLQHRNVVRLV 70
F + G GGFG V K A R+ R+ + E+ + E+ +AKL H N+V
Sbjct: 14 FKEIELIGSGGFGQVFK--AKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYN 71
Query: 71 GC 72
GC
Sbjct: 72 GC 73
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTV--CKEVAV----------KRLSRKSRQGL--EEFKDEIILIAKLQHRNVVRL 69
G G F V C+E + KR ++ SR+G+ E+ + E+ ++ ++QH NV+ L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 70 VGCGEEK---LLIYELM 83
E K +LI EL+
Sbjct: 80 HEVYENKTDVILILELV 96
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 30.0 bits (66), Expect = 0.36, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G FG V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 76 CTREPPFYIITEFM 89
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 30.0 bits (66), Expect = 0.36, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
Query: 26 GGFGTVCKE--------VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLV 70
G FG V K A K + KS + LE++ EI ++A H N+V+L+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 73
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 30.0 bits (66), Expect = 0.36, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 76
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K ++Y
Sbjct: 77 RLRYFFYSSGEKKDVVY 93
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTV--CKEVAV----------KRLSRKSRQGL--EEFKDEIILIAKLQHRNVVRL 69
G G F V C+E + KR ++ SR+G+ E+ + E+ ++ ++QH NV+ L
Sbjct: 20 GSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 70 VGCGEEK---LLIYELM 83
E K +LI EL+
Sbjct: 80 HEVYENKTDVILILELV 96
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 24 GQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVGCGEE 75
G+G +G V +A+K + + + + +EI L L+H+N+V+ +G E
Sbjct: 17 GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE 76
Query: 76 KLLIYELMPQ 85
I M Q
Sbjct: 77 NGFIKIFMEQ 86
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 29.6 bits (65), Expect = 0.44, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 12/60 (20%)
Query: 24 GQGGFGTVCK-----------EVAVKRLSRKSR-QGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G FG V + A+K LSR + Q +E F E +L+ L H NV+ L+G
Sbjct: 30 GKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIG 89
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 24 GQGGFGTVCKEVAVKRLSRKS------RQGLEEFKDEIILIAKLQHRNVVRLVGCGE 74
G GGFG V K A R+ K+ + E+ + E+ +AKL H N+V GC +
Sbjct: 20 GSGGFGQVFK--AKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWD 74
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 29.6 bits (65), Expect = 0.47, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 10/57 (17%)
Query: 24 GQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKD--EIILIAKLQHRNVVRLV 70
G G +G+VC ++AVK+LSR + + + E+ L+ ++H NV+ L+
Sbjct: 60 GSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 116
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 29.3 bits (64), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 24 GQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVGCGEE 75
G+G +G V +A+K + + + + +EI L L+H+N+V+ +G E
Sbjct: 31 GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE 90
Query: 76 KLLIYELMPQ 85
I M Q
Sbjct: 91 NGFIKIFMEQ 100
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 29.3 bits (64), Expect = 0.52, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 35 VAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG-CGEEK--LLIYELMP 84
VAVK L + + +EEF E ++ +++H N+V+L+G C E ++ E MP
Sbjct: 60 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMP 111
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 29.3 bits (64), Expect = 0.58, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 15/86 (17%)
Query: 10 INAATDGFSDFNKN----GQGGFGTV--CK------EVAVKRLSR---KSRQGLEEFKDE 54
+ +T FSD K G+G FG V CK E AVK +S+ K + E E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 55 IILIAKLQHRNVVRLVGCGEEKLLIY 80
+ L+ +L H N+ +L E+K Y
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFY 102
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With
N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 24 GQGGFGTV--CKEVAV----------KRLSRKSRQGL--EEFKDEIILIAKLQHRNVVRL 69
G G F V C+E + KR ++ SR+G+ E+ + E+ ++ ++QH NV+ L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 70 VGCGEEK---LLIYELM 83
E K +LI EL+
Sbjct: 80 HEVYENKTDVILIGELV 96
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 29.3 bits (64), Expect = 0.60, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Query: 24 GQGGFGTVCK--------EVAVKRLSRKSRQ-GLEEFKDEIILIAKLQHRNVVR 68
G+GGFG V + A+KR+ +R+ E+ E+ +AKL+H +VR
Sbjct: 15 GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVR 68
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 29.3 bits (64), Expect = 0.61, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Query: 24 GQGGFGTVCK------EVAVKRLSRKS----RQGLEEFKDEIILIAKLQHRNVVRLVG 71
G GGFG V + EVAVK Q +E + E L A L+H N++ L G
Sbjct: 16 GIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 29.3 bits (64), Expect = 0.64, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 83 CTREPPFYIIIEFM 96
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain
Bound With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain
Bound With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 29.3 bits (64), Expect = 0.64, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 78 CTREPPFYIIIEFM 91
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 29.3 bits (64), Expect = 0.64, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 76 CTREPPFYIIIEFM 89
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 28.9 bits (63), Expect = 0.67, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 24 GQGGFGTVC--------KEVAVKRLSRKSRQGLE-EFKDEIILIAKLQHRNVVRLVGCGE 74
G G F V K VA+K +++K+ +G E ++EI ++ K++H N+V L E
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYE 86
Query: 75 EKLLIYELM 83
+Y +M
Sbjct: 87 SGGHLYLIM 95
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase
Bound With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And
Overcomes Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And
Overcomes Mutation-B Resistance
Length = 288
Score = 28.9 bits (63), Expect = 0.68, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 78 CTREPPFYIIIEFM 91
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex
With The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex
With The Inhibitor Pha-739358
Length = 286
Score = 28.9 bits (63), Expect = 0.68, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 79 CTREPPFYIIIEFM 92
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 28.9 bits (63), Expect = 0.68, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 83 CTREPPFYIITEFM 96
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 28.9 bits (63), Expect = 0.68, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 80 CTREPPFYIITEFM 93
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 285 CTREPPFYIITEFM 298
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 324 CTREPPFYIITEFM 337
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 83 CTREPPFYIITEFM 96
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 78 CTREPPFYIITEFM 91
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric
Lkb1-Stradalpha-Mo25alpha Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric
Lkb1-Stradalpha-Mo25alpha Complex
Length = 305
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 14/74 (18%)
Query: 24 GQGGFGTVCKEVAVKRLSRKS------------RQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G +G V + + + L R++ G K EI L+ +L+H+NV++LV
Sbjct: 14 GEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVD 73
Query: 72 C--GEEKLLIYELM 83
EEK +Y +M
Sbjct: 74 VLYNEEKQKMYMVM 87
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib
(Sti571, Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib
(Sti571, Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib
(Sti571, Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib
(Sti571, Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 78 CTREPPFYIITEFM 91
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 82 CTREPPFYIITEFM 95
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 78 CTREPPFYIITEFM 91
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound
To Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound
To Activated Abl Kinase Domain
Length = 278
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 83 CTREPPFYIITEFM 96
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 80 CTREPPFYIITEFM 93
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 282 CTREPPFYIITEFM 295
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl
Tyrosine Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl
Tyrosine Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And
Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And
Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment
(Frag1) I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment
(Frag1) I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 83 CTREPPFYIITEFM 96
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 28.9 bits (63), Expect = 0.71, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 80 CTREPPFYIITEFM 93
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 28.9 bits (63), Expect = 0.74, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 91 CTREPPFYIITEFM 104
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 28.9 bits (63), Expect = 0.75, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 79 CTREPPFYIITEFM 92
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 28.9 bits (63), Expect = 0.75, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 78 CTREPPFYIITEFM 91
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 28.9 bits (63), Expect = 0.75, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 17 FSDFNKNGQGGFGTVCK--------EVAVKRLSRKSRQGL--EEFKDEIILIAKLQHRNV 66
+ D G G +G VC +VA+K+L R + L + E+ L+ ++H NV
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 67 VRLV 70
+ L+
Sbjct: 87 IGLL 90
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 28.9 bits (63), Expect = 0.81, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 13 ATDGFSDFNKNGQGGFGTVCKE--------VAVKRLS-RKSRQGLEEFK-DEIILIAKLQ 62
+ D + K G+G +G V K VA+KR+ +G+ E+ L+ +LQ
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 63 HRNVVRL 69
HRN++ L
Sbjct: 92 HRNIIEL 98
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 28.9 bits (63), Expect = 0.84, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG- 71
+K G G +G V + VAVK L + + +EEF E ++ +++H N+V+L+G
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 72 CGEEK--LLIYELM 83
C E +I E M
Sbjct: 76 CTREPPFYIITEFM 89
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 28.5 bits (62), Expect = 0.96, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 21 NKNGQGGFGTVCK--------EVAVKRL---SRKSRQGLEEFKDEIILIAKLQHRNVVRL 69
+K G GG TV +VA+K + R+ + L+ F+ E+ ++L H+N+V +
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 70 VGCGEEKLLIYELM 83
+ EE Y +M
Sbjct: 77 IDVDEEDDCYYLVM 90
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 76
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 77 RLRYFFYSSGEKKDEVY 93
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 81
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 82 RLRYFFYSSGEKKDEVY 98
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 104
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 105 RLRYFFYSSGEKKDEVY 121
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 114
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 115 RLRYFFYSSGEKKDEVY 131
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 112
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 113 RLRYFFYSSGEKKDEVY 129
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 95
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 96 RLRYFFYSSGEKKDEVY 112
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 110
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 111 RLRYFFYSSGEKKDEVY 127
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 110
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 111 RLRYFFYSSGEKKDEVY 127
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 155
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 156 RLRYFFYSSGEKKDEVY 172
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 84
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 85 RLRYFFYSSGEKKDEVY 101
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 88
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 89 RLRYFFYSSGEKKDEVY 105
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b
Inhibitor That Attenuates Hyperactivity In Clock Mutant
Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b
Inhibitor That Attenuates Hyperactivity In Clock Mutant
Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 76
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 77 RLRYFFYSSGEKKDEVY 93
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 88
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 89 RLRYFFYSSGEKKDEVY 105
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 80
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 81 RLRYFFYSSGEKKDEVY 97
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 77
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 78 RLRYFFYSSGEKKDEVY 94
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 76
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 77 RLRYFFYSSGEKKDEVY 93
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ + R FK+ E+ ++ KL H N+V
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 89
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 90 RLRYFFYSSGEKKDEVY 106
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLS-RKSRQGLEEFK-DEIILIAKLQHRNV 66
+ K G+G +GTV K VA+KR+ +G+ EI L+ +L+H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 67 VRL--VGCGEEKL-LIYELMPQQ 86
VRL V ++KL L++E Q
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQD 86
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 62 QHRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQ 88
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 62 QHRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQ 89
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 62 QHRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQ 88
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 62 QHRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 62 QHRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQ 88
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A
Complexed With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A
Complexed With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 62 QHRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQ 89
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active
Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 62 QHRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 62 QHRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 62 QHRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQ 89
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 62 QHRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQ 90
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 299
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 13 ATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQ 62
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 63 HRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 13 ATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQ 62
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 63 HRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 13 ATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQ 62
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 63 HRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex
With A Peptide Containing Both The Substrate And
Recruitment Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex
With A Peptide Containing Both The Substrate And
Recruitment Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 13 ATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQ 62
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 63 HRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin
B
Length = 289
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 13 ATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQ 62
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 63 HRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 17 FSDFNKNGQGGFGTVC--------KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVR 68
++ F K GQG GTV +EVA+++++ + + E +EI+++ + ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 69 LVGC---GEEKLLIYELM 83
+ G+E ++ E +
Sbjct: 83 YLDSYLVGDELWVVMEYL 100
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 17 FSDFNKNGQGGFGTVC--------KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVR 68
++ F K GQG GTV +EVA+++++ + + E +EI+++ + ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 69 LVGC---GEEKLLIYELM 83
+ G+E ++ E +
Sbjct: 82 YLDSYLVGDELWVVMEYL 99
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 12/60 (20%)
Query: 24 GQGGFGTVCKE-----------VAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FG VC+ VA+K L + + EF E ++ + +H N++RL G
Sbjct: 23 GAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEG 82
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 17 FSDFNKNGQGGFGTVC--------KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVR 68
++ F K GQG GTV +EVA+++++ + + E +EI+++ + ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 69 LVGC---GEEKLLIYELM 83
+ G+E ++ E +
Sbjct: 83 YLDSYLVGDELWVVMEYL 100
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The
Ruthenium Phthalimide Complex
Length = 297
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 17 FSDFNKNGQGGFGTVC--------KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVR 68
++ F K GQG GTV +EVA+++++ + + E +EI+++ + ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 69 LVGC---GEEKLLIYELM 83
+ G+E ++ E +
Sbjct: 82 YLDSYLVGDELWVVMEYL 99
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 17 FSDFNKNGQGGFGTVC--------KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVR 68
++ F K GQG GTV +EVA+++++ + + E +EI+++ + ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 69 LVGC---GEEKLLIYELM 83
+ G+E ++ E +
Sbjct: 82 YLDSYLVGDELWVVMEYL 99
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 12/60 (20%)
Query: 24 GQGGFGTVCKE-----------VAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G G FG VC+ VA+K L + + EF E ++ + +H N++RL G
Sbjct: 25 GAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEG 84
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 15 DGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQHR 64
+ F K G+G +G V K VA+K RL ++ EI L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 65 NVVRLVGC--GEEKL-LIYELMPQ 85
N+V+L+ E KL L++E + Q
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 15 DGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQHR 64
+ F K G+G +G V K VA+K RL ++ EI L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 65 NVVRLVGC--GEEKL-LIYELMPQ 85
N+V+L+ E KL L++E + Q
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 15 DGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQHR 64
+ F K G+G +G V K VA+K RL ++ EI L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 65 NVVRLVGC--GEEKL-LIYELMPQ 85
N+V+L+ E KL L++E + Q
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr
160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 15 DGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQHR 64
+ F K G+G +G V K VA+K RL ++ EI L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 65 NVVRLVGC--GEEKL-LIYELMPQ 85
N+V+L+ E KL L++E + Q
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 15 DGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQHR 64
+ F K G+G +G V K VA+K RL ++ EI L+ +L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 65 NVVRLVGC--GEEKL-LIYELMPQ 85
N+V+L+ E KL L++E + Q
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ 90
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 15 DGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQHR 64
+ F K G+G +G V K VA+K RL ++ EI L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 65 NVVRLVGC--GEEKL-LIYELMPQ 85
N+V+L+ E KL L++E + Q
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin
A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin
A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 15 DGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQHR 64
+ F K G+G +G V K VA+K RL ++ EI L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 65 NVVRLVGC--GEEKL-LIYELMPQ 85
N+V+L+ E KL L++E + Q
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 15 DGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQHR 64
+ F K G+G +G V K VA+K RL ++ EI L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 65 NVVRLVGC--GEEKL-LIYELMPQ 85
N+V+L+ E KL L++E + Q
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ 93
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 15 DGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQHR 64
+ F K G+G +G V K VA+K RL ++ EI L+ +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 65 NVVRLVGC--GEEKL-LIYELMPQ 85
N+V+L+ E KL L++E + Q
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 15 DGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQHR 64
+ F K G+G +G V K VA+K RL ++ EI L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 65 NVVRLVGC--GEEKL-LIYELMPQ 85
N+V+L+ E KL L++E + Q
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 15 DGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQHR 64
+ F K G+G +G V K VA+K RL ++ EI L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 65 NVVRLVGC--GEEKL-LIYELMPQ 85
N+V+L+ E KL L++E + Q
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ 93
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN
OXINDOLE Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN
OXINDOLE Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu-
Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu-
Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Dph- 042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Din- 234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With
Din- 232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With
Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor
Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 15 DGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQHR 64
+ F K G+G +G V K VA+K RL ++ EI L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 65 NVVRLVGC--GEEKL-LIYELMPQ 85
N+V+L+ E KL L++E + Q
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 19/88 (21%)
Query: 9 VINAAT---DGFSDFNKNGQGGFGTV-------------CKEVAVKRLSRKSRQGLEEFK 52
++NA+T D + + G+G F V K + K+LS + Q LE
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER-- 77
Query: 53 DEIILIAKLQHRNVVRLVGCGEEKLLIY 80
E + KLQH N+VRL +E+ Y
Sbjct: 78 -EARICRKLQHPNIVRLHDSIQEESFHY 104
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 28.1 bits (61), Expect = 1.5, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 13/59 (22%)
Query: 24 GQGGFGTVCKEVAVKRLS-----------RKSRQGLEEFKDEIILIAKLQHRNVVRLVG 71
G+G +G V ++AV R++ +++ E K EI + A L H NVV+ G
Sbjct: 16 GEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 27.7 bits (60), Expect = 1.5, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 17 FSDFNKNGQGGFGTV-------C-KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVR 68
+ D G GG G V C K VA+K++ Q ++ EI +I +L H N+V+
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 69 L 69
+
Sbjct: 73 V 73
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 27 GFGTVCKEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRL 69
G K + K+LS + Q LE E + KLQH N+VRL
Sbjct: 31 GLEFAAKIINTKKLSARDFQKLER---EARICRKLQHPNIVRL 70
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 27 GFGTVCKEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRL 69
G K + K+LS + Q LE E + KLQH N+VRL
Sbjct: 30 GLEFAAKIINTKKLSARDFQKLER---EARICRKLQHPNIVRL 69
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 27 GFGTVCKEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRL 69
G K + K+LS + Q LE E + KLQH N+VRL
Sbjct: 31 GLEFAAKIINTKKLSARDFQKLER---EARICRKLQHPNIVRL 70
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 24 GQGGFGTVC--------KEVAVKRLSRKSRQGLEE-FKDEIILIAKLQHRNVVRLVGCGE 74
G G F V K AVK + +K+ +G E ++EI ++ K++H N+V L E
Sbjct: 31 GTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYE 90
Query: 75 EKLLIYELM 83
+Y +M
Sbjct: 91 SPNHLYLVM 99
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 18/79 (22%)
Query: 24 GQGGFGTV--CK----------EVAVKRLSRKSR-QGLEEFKDEIILIAKLQHRNVVRLV 70
G+G FG V C+ +VAVK L +S + + K EI ++ L H N+V+
Sbjct: 30 GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYK 89
Query: 71 G-CGEEK----LLIYELMP 84
G C E+ LI E +P
Sbjct: 90 GICTEDGGNGIKLIMEFLP 108
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 18/79 (22%)
Query: 24 GQGGFGTV--CK----------EVAVKRLSRKSR-QGLEEFKDEIILIAKLQHRNVVRLV 70
G+G FG V C+ +VAVK L +S + + K EI ++ L H N+V+
Sbjct: 18 GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYK 77
Query: 71 G-CGEEK----LLIYELMP 84
G C E+ LI E +P
Sbjct: 78 GICTEDGGNGIKLIMEFLP 96
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 27.3 bits (59), Expect = 1.9, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 14/66 (21%)
Query: 20 FNKNGQGGFGTVCK-----------EVAVKRLSR---KSRQGLEEFKDEIILIAKLQHRN 65
K G G FG V + VAVK L + +++F E+ + L HRN
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 66 VVRLVG 71
++RL G
Sbjct: 77 LIRLYG 82
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 27.3 bits (59), Expect = 1.9, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 14/66 (21%)
Query: 20 FNKNGQGGFGTVCK-----------EVAVKRLSR---KSRQGLEEFKDEIILIAKLQHRN 65
K G G FG V + VAVK L + +++F E+ + L HRN
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 66 VVRLVG 71
++RL G
Sbjct: 77 LIRLYG 82
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 27.3 bits (59), Expect = 1.9, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 14/66 (21%)
Query: 20 FNKNGQGGFGTVCK-----------EVAVKRLSR---KSRQGLEEFKDEIILIAKLQHRN 65
K G G FG V + VAVK L + +++F E+ + L HRN
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 66 VVRLVG 71
++RL G
Sbjct: 73 LIRLYG 78
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 27.3 bits (59), Expect = 1.9, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 24 GQGGFGTVC--------KEVAVKRLSRKSRQGLE-EFKDEIILIAKLQHRNVVRLVGCGE 74
G G F V K VA+K +++++ +G E ++EI ++ K++H N+V L E
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYE 86
Query: 75 EKLLIYELM 83
+Y +M
Sbjct: 87 SGGHLYLIM 95
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain
Of The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain
Of The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 27.3 bits (59), Expect = 1.9, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 14/66 (21%)
Query: 20 FNKNGQGGFGTVCK-----------EVAVKRLSR---KSRQGLEEFKDEIILIAKLQHRN 65
K G G FG V + VAVK L + +++F E+ + L HRN
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 66 VVRLVG 71
++RL G
Sbjct: 83 LIRLYG 88
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 27.3 bits (59), Expect = 1.9, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 14/66 (21%)
Query: 20 FNKNGQGGFGTVCK-----------EVAVKRLSR---KSRQGLEEFKDEIILIAKLQHRN 65
K G G FG V + VAVK L + +++F E+ + L HRN
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 66 VVRLVG 71
++RL G
Sbjct: 73 LIRLYG 78
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 27.3 bits (59), Expect = 1.9, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 14/66 (21%)
Query: 20 FNKNGQGGFGTVCK-----------EVAVKRLSR---KSRQGLEEFKDEIILIAKLQHRN 65
K G G FG V + VAVK L + +++F E+ + L HRN
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 66 VVRLVG 71
++RL G
Sbjct: 73 LIRLYG 78
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 24 GQGGFGTVC--------KEVAVKRLSRKSRQGLE-EFKDEIILIAKLQHRNVVRLVGCGE 74
G G F V K VA+K +++++ +G E ++EI ++ K++H N+V L E
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYE 86
Query: 75 EKLLIYELM 83
+Y +M
Sbjct: 87 SGGHLYLIM 95
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 16/59 (27%)
Query: 24 GQGGFGTVCK-------------EVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRL 69
G+G F TV K E+ ++L++ RQ FK+E + LQH N+VR
Sbjct: 35 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHPNIVRF 90
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 14/66 (21%)
Query: 20 FNKNGQGGFGTVCK-----------EVAVKRLSR---KSRQGLEEFKDEIILIAKLQHRN 65
K G G FG V + VAVK L + +++F E+ + L HRN
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 66 VVRLVG 71
++RL G
Sbjct: 83 LIRLYG 88
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 24 GQGGFGTVCKE--------VAVKRLSRKSRQGLE-EFKDEIILIAKLQHRNVVRLVGCGE 74
G+G FG V VAVK L+ +F E ++ + H N+VRL+G
Sbjct: 123 GRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT 182
Query: 75 EKLLIYELM 83
+K IY +M
Sbjct: 183 QKQPIYIVM 191
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 24 GQGGFGTVCKE--------VAVKRLSRKSRQGLE-EFKDEIILIAKLQHRNVVRLVGCGE 74
G+G FG V VAVK L+ +F E ++ + H N+VRL+G
Sbjct: 123 GRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT 182
Query: 75 EKLLIYELM 83
+K IY +M
Sbjct: 183 QKQPIYIVM 191
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 24 GQGGFGTVC--------KEVAVKRLSRKSRQGLE-EFKDEIILIAKLQHRNVVRLVGCGE 74
G G F V K VA+K +++++ +G E ++EI ++ K++H N+V L E
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYE 86
Query: 75 EKLLIYELM 83
+Y +M
Sbjct: 87 SGGHLYLIM 95
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 22 KNGQGGFGTV-------CKEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRL--VGC 72
K G G FG V +VAVK L + ++ F +E L+ LQH +VRL V
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 73 GEEKL-LIYELMPQ 85
EE + +I E M +
Sbjct: 78 KEEPIYIITEFMAK 91
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 62 QHRNVVRLVGC--GEEKL-LIYELM 83
H N+V+L+ E KL L++E +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 62 QHRNVVRLVGC--GEEKL-LIYELM 83
H N+V+L+ E KL L++E +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 62 QHRNVVRLVGC--GEEKL-LIYELM 83
H N+V+L+ E KL L++E +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 62 QHRNVVRLVGC--GEEKL-LIYELM 83
H N+V+L+ E KL L++E +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 43 KSRQGLEEFKDEIILIAKLQHRNVVRLV 70
+ R +E+ EI ++ KL H NVV+LV
Sbjct: 75 QPRGPIEQVYQEIAILKKLDHPNVVKLV 102
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
F82h-L83v- H84d Mutant With An
O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
F82h-L83v- H84d Mutant With An
O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 26.6 bits (57), Expect = 3.4, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 12 AATDGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKL 61
+ + F K G+G +G V K VA+K RL ++ EI L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 62 QHRNVVRLVGC--GEEKL-LIYELMPQ 85
H N+V+L+ E KL L++E + Q
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQ 89
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 24 GQGGFGTVC-------KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG-CGEE 75
G G FG V +VA+K + R+ E+F +E ++ KL H +V+L G C E+
Sbjct: 16 GSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 76 K--LLIYELM 83
L++E M
Sbjct: 75 APICLVFEFM 84
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 14 TDGFSDFNKNGQGGFGTV--CK------EVAVKRLSRKSRQGLEE---FKDEIILIAKLQ 62
+D + K G G +G V CK E A+K + + S DE+ ++ +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 63 HRNVVRLVGCGEEKLLIYELM 83
H N+++L E+K Y +M
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVM 100
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 24 GQGGFGTVC-------KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG-CGEE 75
G G FG V +VA+K + R+ E+F +E ++ KL H +V+L G C E+
Sbjct: 14 GSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 76 K--LLIYELM 83
L++E M
Sbjct: 73 APICLVFEFM 82
>pdb|2H1R|A Chain A, Crystal Structure Of A Dimethyladenosine Transferase
From Plasmodium Falciparum
pdb|2H1R|B Chain B, Crystal Structure Of A Dimethyladenosine Transferase
From Plasmodium Falciparum
Length = 299
Score = 26.6 bits (57), Expect = 3.8, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 53 DEIILIAKLQHRNVVRLVGCGEEKLLIYELMPQQK 87
D+II AK++ ++V +GCG L + +L+P K
Sbjct: 32 DKIIYAAKIKSSDIVLEIGCGTGNLTV-KLLPLAK 65
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 26.6 bits (57), Expect = 3.9, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 24 GQGGFGTV-------CKEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRL 69
G G FG V +VAVK L + ++ F +E L+ LQH +VRL
Sbjct: 22 GAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRL 73
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 24 GQGGFGTVC-------KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG-CGEE 75
G G FG V +VA+K + R+ E+F +E ++ KL H +V+L G C E+
Sbjct: 16 GSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 76 K--LLIYELM 83
L++E M
Sbjct: 75 APICLVFEFM 84
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ QG + FK+ E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIV 76
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 77 RLRYFFYSSGEKKDEVY 93
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ QG + FK+ E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIV 76
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 77 RLRYFFYSSGEKKDEVY 93
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 18/77 (23%)
Query: 17 FSDFNKNGQGGFGTVCKE--------VAVKRLSRKSRQGLEEFKD-EIILIAKLQHRNVV 67
++D G G FG V + VA+K++ QG + FK+ E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIV 76
Query: 68 RL----VGCGEEKLLIY 80
RL GE+K +Y
Sbjct: 77 RLRYFFYSSGEKKDEVY 93
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 18/79 (22%)
Query: 24 GQGGFGTV---CKE---------VAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRLV 70
G+G FG V C + VAVK L Q +K EI ++ L H ++++
Sbjct: 23 GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYK 82
Query: 71 GC----GEEKL-LIYELMP 84
GC GE+ L L+ E +P
Sbjct: 83 GCCEDQGEKSLQLVMEYVP 101
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 18/79 (22%)
Query: 24 GQGGFGTV---CKE---------VAVKRLSRK-SRQGLEEFKDEIILIAKLQHRNVVRLV 70
G+G FG V C + VAVK L Q +K EI ++ L H ++++
Sbjct: 23 GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYK 82
Query: 71 GC----GEEKL-LIYELMP 84
GC GE+ L L+ E +P
Sbjct: 83 GCCEDQGEKSLQLVMEYVP 101
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 24 GQGGFGTVC-------KEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVG-CGEE 75
G G FG V +VA+K + R+ E+F +E ++ KL H +V+L G C E+
Sbjct: 19 GSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 76 K--LLIYELM 83
L++E M
Sbjct: 78 APICLVFEFM 87
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 18/63 (28%)
Query: 24 GQGGFGTVCK-----------EVAVKRL----SRKSRQGLEEFKDEIILIAKLQHRNVVR 68
G G FG VC VA+K L + K R+ +F E ++ + H N++R
Sbjct: 52 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR---DFLGEASIMGQFDHPNIIR 108
Query: 69 LVG 71
L G
Sbjct: 109 LEG 111
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 18/63 (28%)
Query: 24 GQGGFGTVCK-----------EVAVKRL----SRKSRQGLEEFKDEIILIAKLQHRNVVR 68
G G FG VC VA+K L + K R+ +F E ++ + H N++R
Sbjct: 42 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR---DFLGEASIMGQFDHPNIIR 98
Query: 69 LVG 71
L G
Sbjct: 99 LEG 101
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 18/63 (28%)
Query: 24 GQGGFGTVCK-----------EVAVKRL----SRKSRQGLEEFKDEIILIAKLQHRNVVR 68
G G FG VC VA+K L + K R+ +F E ++ + H N++R
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR---DFLGEASIMGQFDHPNIIR 110
Query: 69 LVG 71
L G
Sbjct: 111 LEG 113
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 18/63 (28%)
Query: 24 GQGGFGTVCK-----------EVAVKRL----SRKSRQGLEEFKDEIILIAKLQHRNVVR 68
G G FG VC VA+K L + K R+ +F E ++ + H N++R
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR---DFLGEASIMGQFDHPNIIR 110
Query: 69 LVG 71
L G
Sbjct: 111 LEG 113
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 18/63 (28%)
Query: 24 GQGGFGTVCK-----------EVAVKRL----SRKSRQGLEEFKDEIILIAKLQHRNVVR 68
G G FG VC VA+K L + K R+ +F E ++ + H N++R
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR---DFLGEASIMGQFDHPNIIR 110
Query: 69 LVG 71
L G
Sbjct: 111 LEG 113
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 18/63 (28%)
Query: 24 GQGGFGTVCK-----------EVAVKRL----SRKSRQGLEEFKDEIILIAKLQHRNVVR 68
G G FG VC VA+K L + K R+ +F E ++ + H N++R
Sbjct: 25 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR---DFLGEASIMGQFDHPNIIR 81
Query: 69 LVG 71
L G
Sbjct: 82 LEG 84
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 18/63 (28%)
Query: 24 GQGGFGTVCK-----------EVAVKRL----SRKSRQGLEEFKDEIILIAKLQHRNVVR 68
G G FG VC VA+K L + K R+ +F E ++ + H N++R
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR---DFLGEASIMGQFDHPNIIR 110
Query: 69 LVG 71
L G
Sbjct: 111 LEG 113
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 18/63 (28%)
Query: 24 GQGGFGTVCK-----------EVAVKRL----SRKSRQGLEEFKDEIILIAKLQHRNVVR 68
G G FG VC VA+K L + K R+ +F E ++ + H N++R
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR---DFLGEASIMGQFDHPNIIR 110
Query: 69 LVG 71
L G
Sbjct: 111 LEG 113
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 18/63 (28%)
Query: 24 GQGGFGTVCK-----------EVAVKRL----SRKSRQGLEEFKDEIILIAKLQHRNVVR 68
G G FG VC VA+K L + K R+ +F E ++ + H N++R
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR---DFLGEASIMGQFDHPNIIR 110
Query: 69 LVG 71
L G
Sbjct: 111 LEG 113
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 18/63 (28%)
Query: 24 GQGGFGTVCK-----------EVAVKRL----SRKSRQGLEEFKDEIILIAKLQHRNVVR 68
G G FG VC VA+K L + K R+ +F E ++ + H N++R
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR---DFLGEASIMGQFDHPNIIR 110
Query: 69 LVG 71
L G
Sbjct: 111 LEG 113
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 18/63 (28%)
Query: 24 GQGGFGTVCK-----------EVAVKRL----SRKSRQGLEEFKDEIILIAKLQHRNVVR 68
G G FG VC VA+K L + K R+ +F E ++ + H N++R
Sbjct: 25 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR---DFLGEASIMGQFDHPNIIR 81
Query: 69 LVG 71
L G
Sbjct: 82 LEG 84
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 18/63 (28%)
Query: 24 GQGGFGTVCK-----------EVAVKRL----SRKSRQGLEEFKDEIILIAKLQHRNVVR 68
G G FG VC VA+K L + K R+ +F E ++ + H N++R
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR---DFLGEASIMGQFDHPNIIR 110
Query: 69 LVG 71
L G
Sbjct: 111 LEG 113
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 18/63 (28%)
Query: 24 GQGGFGTVCK-----------EVAVKRL----SRKSRQGLEEFKDEIILIAKLQHRNVVR 68
G G FG VC VA+K L + K R+ +F E ++ + H N++R
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR---DFLGEASIMGQFDHPNIIR 110
Query: 69 LVG 71
L G
Sbjct: 111 LEG 113
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 14 TDGFSDFNKNGQGGFGTV--CK------EVAVKRLSRKSRQGLEE---FKDEIILIAKLQ 62
+D + K G G +G V CK E A+K + + S DE+ ++ +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 63 HRNVVRLVGCGEEKLLIYELM 83
H N+++L E+K Y +M
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVM 83
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 26.2 bits (56), Expect = 4.9, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 15 DGFSDFNKNGQGGFGTVCKE--------VAVK--RLSRKSRQGLEEFKDEIILIAKLQHR 64
+ F K G+G +G V K VA+K RL ++ EI L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 65 NVVRLVGC--GEEKL-LIYELMPQ 85
N+V+L+ E KL L++E + Q
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ 85
>pdb|1I6V|C Chain C, Thermus Aquaticus Core Rna Polymerase-Rifampicin Complex
Length = 1118
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 44 SRQGLEEFKDEIILIAKLQHRNVVRLVGCG 73
SR L +FKDE ++ L+H+ + +G G
Sbjct: 387 SRSQLSQFKDETNPLSSLRHKRRISALGPG 416
>pdb|1HQM|C Chain C, Crystal Structure Of Thermus Aquaticus Core Rna
Polymerase- Includes Complete Structure With Side-Chains
(Except For Disordered Regions)-Further Refined From
Original Deposition-Contains Additional Sequence
Information
Length = 1119
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 44 SRQGLEEFKDEIILIAKLQHRNVVRLVGCG 73
SR L +FKDE ++ L+H+ + +G G
Sbjct: 387 SRSQLSQFKDETNPLSSLRHKRRISALGPG 416
>pdb|1YNJ|C Chain C, Taq Rna Polymerase-Sorangicin Complex
pdb|1YNN|C Chain C, Taq Rna Polymerase-rifampicin Complex
pdb|2GHO|C Chain C, Recombinant Thermus Aquaticus Rna Polymerase For
Structural Studies
Length = 1119
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 44 SRQGLEEFKDEIILIAKLQHRNVVRLVGCG 73
SR L +FKDE ++ L+H+ + +G G
Sbjct: 387 SRSQLSQFKDETNPLSSLRHKRRISALGPG 416
>pdb|1L9U|C Chain C, Thermus Aquaticus Rna Polymerase Holoenzyme At 4 A
Resolution
pdb|1L9U|L Chain L, Thermus Aquaticus Rna Polymerase Holoenzyme At 4 A
Resolution
pdb|1L9Z|C Chain C, Thermus Aquaticus Rna Polymerase HoloenzymeFORK-Junction
Promoter Dna Complex At 6.5 A Resolution
Length = 1118
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 44 SRQGLEEFKDEIILIAKLQHRNVVRLVGCG 73
SR L +FKDE ++ L+H+ + +G G
Sbjct: 387 SRSQLSQFKDETNPLSSLRHKRRISALGPG 416
>pdb|1IW7|C Chain C, Crystal Structure Of The Rna Polymerase Holoenzyme From
Thermus Thermophilus At 2.6a Resolution
pdb|1IW7|M Chain M, Crystal Structure Of The Rna Polymerase Holoenzyme From
Thermus Thermophilus At 2.6a Resolution
pdb|1SMY|C Chain C, Structural Basis For Transcription Regulation By Alarmone
Ppgpp
pdb|1SMY|M Chain M, Structural Basis For Transcription Regulation By Alarmone
Ppgpp
pdb|1ZYR|C Chain C, Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Streptolydigin
pdb|1ZYR|M Chain M, Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Streptolydigin
pdb|2A68|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifabutin
pdb|2A68|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifabutin
pdb|2A69|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifapentin
pdb|2A69|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifapentin
pdb|2A6E|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme
pdb|2A6E|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme
pdb|2A6H|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Sterptolydigin
pdb|2A6H|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Sterptolydigin
pdb|2CW0|C Chain C, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme At 3.3 Angstroms Resolution
pdb|2CW0|M Chain M, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme At 3.3 Angstroms Resolution
pdb|2BE5|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Inhibitor Tagetitoxin
pdb|2BE5|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Inhibitor Tagetitoxin
pdb|2O5I|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Elongation Complex
pdb|2O5I|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Elongation Complex
pdb|2O5J|C Chain C, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog
pdb|2O5J|M Chain M, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog
pdb|2PPB|C Chain C, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog And
Antibiotic Streptolydigin
pdb|2PPB|M Chain M, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog And
Antibiotic Streptolydigin
pdb|3DXJ|C Chain C, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Myxopyronin
pdb|3DXJ|M Chain M, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Myxopyronin
pdb|3EQL|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Myxopyronin
pdb|3EQL|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Myxopyronin
pdb|3AOH|C Chain C, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|H Chain H, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|M Chain M, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOI|C Chain C, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|H Chain H, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|M Chain M, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|4G7H|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex
pdb|4G7H|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex
pdb|4G7O|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 2 Nt Of Rna
pdb|4G7O|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 2 Nt Of Rna
pdb|4G7Z|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 5-Bru At Template-Strand
Position +1
pdb|4G7Z|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 5-Bru At Template-Strand
Position +1
pdb|4GZY|C Chain C, Crystal Structures Of Bacterial Rna Polymerase Paused
Elongation Complexes
pdb|4GZZ|C Chain C, Crystal Structures Of Bacterial Rna Polymerase Paused
Elongation Complexes
Length = 1119
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 44 SRQGLEEFKDEIILIAKLQHRNVVRLVGCG 73
SR L +FKDE ++ L+H+ + +G G
Sbjct: 387 SRSQLSQFKDETNPLSSLRHKRRISALGPG 416
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 26.2 bits (56), Expect = 5.3, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 49 EEFKDEIILIAKLQHRNVVRLVGCGEEKLLIY 80
EE +EI L+ L H N+++L E+K Y
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFY 122
>pdb|1VC2|A Chain A, Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Thermus Thermophilus Hb8
Length = 331
Score = 25.8 bits (55), Expect = 6.2, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 25 QGGFGTVCKEVAVKRLSRKSRQGLEEFKDEIILIAKLQHRNVVRLVGCGEEK 76
Q G G V + V K+R LE ++I+ A ++ ++ ++G E+
Sbjct: 84 QAGVGVVVESTGVFTDGEKARAHLEAGAKKVIITAPAKNEDITVVLGVNHEQ 135
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 54 EIILIAKLQHRNVVRLVGCGEE-----KLLIYELMP 84
E ++ KL H+N+V+L EE K+LI E P
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated
Human Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated
Human Tbk1 Kinase- Uld Domain
Length = 396
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 54 EIILIAKLQHRNVVRLVGCGEE-----KLLIYELMP 84
E ++ KL H+N+V+L EE K+LI E P
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase
16 In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase
16 In Complex With Staurosporine
Length = 317
Score = 25.4 bits (54), Expect = 7.3, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 6 HLVVINAATDGFSDFNKNGQGGFGTV--------CKEVAVKRLSRKSRQGLEEFKDEIIL 57
H+V+I+ F K G+GGF V A+KR+ +Q EE + E +
Sbjct: 22 HMVIIDNKHYLF--IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADM 79
Query: 58 IAKLQHRNVVRLVG-CGEEK 76
H N++RLV C E+
Sbjct: 80 HRLFNHPNILRLVAYCLRER 99
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 25.4 bits (54), Expect = 7.3, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 24 GQGGFGTV---CKE---------VAVKRLSRKS-RQGLEEFKDEIILIAKLQHRNVVRLV 70
G+G FG V C + VAVK L + Q +K EI ++ L H ++++
Sbjct: 40 GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYK 99
Query: 71 GCGEE 75
GC E+
Sbjct: 100 GCCED 104
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 24 GQGGFGTV--------CKEVAVKRLSRK--SRQGLEEFKDEIILIAKLQHRNVVRLVGCG 73
G+G F V KEVAVK + + + L++ E+ ++ L H N+V+L
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI 82
Query: 74 EEKLLIYELM 83
E + +Y +M
Sbjct: 83 ETEKTLYLVM 92
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 24 GQGGFGTV--------CKEVAVKRLSRK--SRQGLEEFKDEIILIAKLQHRNVVRLVGCG 73
G+G F V KEVAVK + + + L++ E+ ++ L H N+V+L
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI 82
Query: 74 EEKLLIYELM 83
E + +Y +M
Sbjct: 83 ETEKTLYLVM 92
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 24 GQGGFGTV--------CKEVAVKRLSRK--SRQGLEEFKDEIILIAKLQHRNVVRLVGCG 73
G+G F V KEVAVK + + + L++ E+ ++ L H N+V+L
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI 82
Query: 74 EEKLLIYELM 83
E + +Y +M
Sbjct: 83 ETEKTLYLVM 92
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
Length = 319
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 24 GQGGFGTV--------CKEVAVKRLSRK--SRQGLEEFKDEIILIAKLQHRNVVRLVGCG 73
G+G F V KEVAVK + + + L++ E+ ++ L H N+V+L
Sbjct: 16 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI 75
Query: 74 EEKLLIYELM 83
E + +Y +M
Sbjct: 76 ETEKTLYLVM 85
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,609,027
Number of Sequences: 62578
Number of extensions: 91476
Number of successful extensions: 613
Number of sequences better than 100.0: 305
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 210
Number of HSP's that attempted gapping in prelim test: 510
Number of HSP's gapped (non-prelim): 306
length of query: 88
length of database: 14,973,337
effective HSP length: 56
effective length of query: 32
effective length of database: 11,468,969
effective search space: 367007008
effective search space used: 367007008
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)