Query 040849
Match_columns 809
No_of_seqs 977 out of 5330
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 20:16:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040849.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040849hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 4.9E-85 1.7E-89 780.3 45.6 596 29-637 8-750 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.1E-65 3.8E-70 613.3 38.6 515 75-601 126-742 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 1.2E-60 4.3E-65 564.8 46.7 549 75-626 25-625 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 2.1E-58 7.3E-63 545.6 47.3 523 75-605 49-627 (680)
5 3t6q_A CD180 antigen; protein- 100.0 1.2E-58 4E-63 540.5 40.1 494 100-605 34-565 (606)
6 4eco_A Uncharacterized protein 100.0 4.4E-60 1.5E-64 552.1 25.1 495 30-601 27-601 (636)
7 3vq2_A TLR4, TOLL-like recepto 100.0 2.4E-57 8.2E-62 529.4 39.3 513 75-606 32-564 (606)
8 3t6q_A CD180 antigen; protein- 100.0 6.9E-57 2.4E-61 525.5 42.6 496 75-580 33-564 (606)
9 4ecn_A Leucine-rich repeat pro 100.0 1.1E-57 3.9E-62 539.3 30.2 496 28-600 264-864 (876)
10 3j0a_A TOLL-like receptor 5; m 100.0 1.7E-56 5.8E-61 539.6 37.1 519 63-605 14-565 (844)
11 3vq2_A TLR4, TOLL-like recepto 100.0 1.2E-55 4.1E-60 515.1 37.8 524 80-626 16-561 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 1.4E-54 4.8E-59 522.8 38.2 521 80-626 9-563 (844)
13 2z81_A CD282 antigen, TOLL-lik 100.0 5.6E-53 1.9E-57 486.6 31.3 497 62-605 3-515 (549)
14 2z63_A TOLL-like receptor 4, v 100.0 5.7E-52 1.9E-56 480.6 34.3 490 99-606 28-537 (570)
15 2z63_A TOLL-like receptor 4, v 100.0 3.8E-50 1.3E-54 465.3 36.2 509 102-626 10-534 (570)
16 2z81_A CD282 antigen, TOLL-lik 100.0 9.4E-51 3.2E-55 468.0 26.9 480 101-626 7-513 (549)
17 4g8a_A TOLL-like receptor 4; l 100.0 9.7E-49 3.3E-53 459.7 37.6 485 100-602 53-582 (635)
18 2z7x_B TOLL-like receptor 1, v 100.0 4.3E-49 1.5E-53 450.7 29.9 463 102-605 3-486 (520)
19 4eco_A Uncharacterized protein 100.0 5.6E-50 1.9E-54 466.9 22.7 452 99-626 81-603 (636)
20 2z7x_B TOLL-like receptor 1, v 100.0 1.7E-49 5.7E-54 454.2 24.9 458 78-580 3-485 (520)
21 4g8a_A TOLL-like receptor 4; l 100.0 8.3E-47 2.8E-51 443.3 39.2 498 114-625 45-582 (635)
22 4ecn_A Leucine-rich repeat pro 100.0 6.4E-48 2.2E-52 456.1 27.9 436 99-602 323-842 (876)
23 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-46 4.2E-51 434.0 29.3 466 78-606 34-516 (562)
24 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-44 4.2E-49 384.3 19.6 293 29-326 2-302 (313)
25 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-43 4E-48 409.2 28.9 459 98-625 30-512 (562)
26 1jl5_A Outer protein YOPM; leu 100.0 1.5E-43 5.2E-48 394.5 23.8 408 93-605 5-416 (454)
27 3v47_A TOLL-like receptor 5B a 100.0 1.7E-42 5.9E-47 389.2 27.4 394 102-606 13-414 (455)
28 3v47_A TOLL-like receptor 5B a 100.0 1.5E-42 5.2E-47 389.7 25.9 367 99-532 30-412 (455)
29 1jl5_A Outer protein YOPM; leu 100.0 1.7E-41 5.8E-46 378.0 27.6 419 75-605 11-434 (454)
30 3bz5_A Internalin-J, INLJ; leu 100.0 4E-40 1.4E-44 367.3 28.3 360 92-535 35-394 (457)
31 3bz5_A Internalin-J, INLJ; leu 100.0 1.8E-39 6.1E-44 362.0 26.1 366 109-606 28-393 (457)
32 1o6v_A Internalin A; bacterial 100.0 6.4E-38 2.2E-42 352.4 32.9 121 97-227 44-164 (466)
33 1o6v_A Internalin A; bacterial 100.0 1.4E-37 4.9E-42 349.6 31.1 144 76-232 47-190 (466)
34 2id5_A Lingo-1, leucine rich r 100.0 8.8E-38 3E-42 352.9 25.2 346 247-628 15-361 (477)
35 3oja_B Anopheles plasmodium-re 100.0 5.9E-37 2E-41 355.1 28.3 174 51-232 7-184 (597)
36 3o6n_A APL1; leucine-rich repe 100.0 1E-36 3.5E-41 334.6 26.8 175 53-232 3-178 (390)
37 2id5_A Lingo-1, leucine rich r 100.0 7.5E-36 2.6E-40 337.1 27.8 309 91-480 26-334 (477)
38 1ogq_A PGIP-2, polygalacturona 100.0 2.1E-36 7.2E-41 320.9 19.5 254 371-627 51-308 (313)
39 4fcg_A Uncharacterized protein 100.0 3.9E-36 1.3E-40 320.7 14.8 271 28-304 22-313 (328)
40 4fmz_A Internalin; leucine ric 100.0 5.7E-33 2E-37 299.9 25.6 307 95-479 40-346 (347)
41 3o6n_A APL1; leucine-rich repe 100.0 6E-33 2.1E-37 304.6 26.1 331 244-626 46-377 (390)
42 4fmz_A Internalin; leucine ric 100.0 1.7E-32 5.9E-37 296.1 27.6 306 240-600 41-346 (347)
43 3oja_B Anopheles plasmodium-re 100.0 9.3E-33 3.2E-37 319.9 26.6 238 372-629 149-386 (597)
44 2ft3_A Biglycan; proteoglycan, 100.0 6E-32 2.1E-36 289.7 24.0 287 101-477 35-331 (332)
45 1xku_A Decorin; proteoglycan, 100.0 1.9E-31 6.5E-36 285.6 26.6 106 99-207 52-157 (330)
46 1z7x_W Ribonuclease inhibitor; 100.0 1.1E-34 3.9E-39 326.2 -2.6 385 171-601 3-441 (461)
47 2ft3_A Biglycan; proteoglycan, 100.0 2.9E-31 9.9E-36 284.4 23.8 287 244-598 34-331 (332)
48 1xku_A Decorin; proteoglycan, 100.0 8.6E-31 2.9E-35 280.5 26.6 288 244-598 32-330 (330)
49 1z7x_W Ribonuclease inhibitor; 100.0 2.1E-34 7.2E-39 324.0 -2.8 356 99-456 3-412 (461)
50 2z80_A TOLL-like receptor 2, v 100.0 3.5E-31 1.2E-35 286.4 16.3 289 56-434 23-317 (353)
51 3ogk_B Coronatine-insensitive 100.0 1.1E-32 3.9E-37 320.2 -5.0 185 61-251 40-251 (592)
52 4fcg_A Uncharacterized protein 100.0 1.6E-29 5.5E-34 269.5 19.8 225 370-600 81-314 (328)
53 3ogk_B Coronatine-insensitive 100.0 5.1E-32 1.7E-36 314.6 0.3 428 114-596 64-547 (592)
54 2z66_A Variable lymphocyte rec 100.0 4E-29 1.4E-33 264.5 20.8 233 370-604 28-265 (306)
55 1ozn_A Reticulon 4 receptor; N 100.0 3.1E-29 1.1E-33 262.5 17.9 229 373-605 14-243 (285)
56 3zyi_A Leucine-rich repeat-con 100.0 1.8E-28 6E-33 274.4 24.9 232 370-604 75-307 (452)
57 2z80_A TOLL-like receptor 2, v 100.0 2.7E-29 9.3E-34 271.5 15.6 280 291-604 30-318 (353)
58 3zyj_A Leucine-rich repeat-con 100.0 3.4E-28 1.2E-32 271.0 24.1 232 370-604 64-296 (440)
59 1wwl_A Monocyte differentiatio 100.0 3.3E-30 1.1E-34 273.3 6.3 246 344-601 42-310 (312)
60 2z66_A Variable lymphocyte rec 100.0 2.4E-28 8.3E-33 258.5 19.0 257 346-605 29-292 (306)
61 1wwl_A Monocyte differentiatio 100.0 1.8E-30 6.2E-35 275.3 2.1 246 98-359 42-310 (312)
62 1ozn_A Reticulon 4 receptor; N 100.0 4.7E-28 1.6E-32 253.4 20.0 252 349-606 15-267 (285)
63 3zyi_A Leucine-rich repeat-con 100.0 3.6E-27 1.2E-31 263.7 25.1 249 372-626 56-306 (452)
64 3zyj_A Leucine-rich repeat-con 100.0 3.7E-27 1.3E-31 262.6 24.3 249 372-626 45-295 (440)
65 3g06_A SSPH2 (leucine-rich rep 100.0 1E-27 3.5E-32 274.7 19.3 88 394-490 221-308 (622)
66 2o6q_A Variable lymphocyte rec 99.9 7.3E-27 2.5E-31 242.1 20.6 217 60-281 2-218 (270)
67 3o53_A Protein LRIM1, AGAP0063 99.9 2.5E-27 8.4E-32 251.8 16.4 238 347-600 12-250 (317)
68 3o53_A Protein LRIM1, AGAP0063 99.9 6.5E-28 2.2E-32 256.2 11.9 249 342-606 31-282 (317)
69 3oja_A Leucine-rich immune mol 99.9 9.3E-28 3.2E-32 269.9 13.3 219 371-604 35-255 (487)
70 3oja_A Leucine-rich immune mol 99.9 6.3E-27 2.1E-31 263.1 17.6 236 344-595 33-270 (487)
71 2z62_A TOLL-like receptor 4, v 99.9 2.8E-26 9.7E-31 238.7 19.7 210 394-605 28-242 (276)
72 3g06_A SSPH2 (leucine-rich rep 99.9 1E-25 3.5E-30 258.2 26.1 268 244-587 41-308 (622)
73 2p1m_B Transport inhibitor res 99.9 2.9E-29 9.8E-34 291.6 -8.0 443 102-601 46-545 (594)
74 2z62_A TOLL-like receptor 4, v 99.9 2E-25 6.7E-30 232.3 18.3 209 370-580 28-241 (276)
75 2o6q_A Variable lymphocyte rec 99.9 7.6E-25 2.6E-29 226.9 22.6 205 396-604 18-222 (270)
76 2p1m_B Transport inhibitor res 99.9 5.1E-28 1.7E-32 281.1 -2.8 378 194-601 104-520 (594)
77 1p9a_G Platelet glycoprotein I 99.9 1.5E-24 5.3E-29 226.6 20.4 205 390-602 6-210 (290)
78 3rfs_A Internalin B, repeat mo 99.9 2.3E-25 7.9E-30 231.0 12.3 221 372-606 21-241 (272)
79 3rfs_A Internalin B, repeat mo 99.9 1.6E-24 5.6E-29 224.6 15.2 205 371-587 42-246 (272)
80 3m19_A Variable lymphocyte rec 99.9 2.4E-24 8.2E-29 220.5 16.3 192 61-258 3-194 (251)
81 4glp_A Monocyte differentiatio 99.9 1.2E-24 4.1E-29 230.3 9.8 201 372-600 93-307 (310)
82 2xwt_C Thyrotropin receptor; s 99.9 1.2E-23 4.1E-28 213.7 16.4 196 395-597 32-236 (239)
83 1p9a_G Platelet glycoprotein I 99.9 3.7E-23 1.3E-27 216.0 20.1 205 413-625 5-210 (290)
84 2ca6_A RAN GTPase-activating p 99.9 4.3E-25 1.5E-29 241.7 4.6 231 372-603 34-319 (386)
85 3goz_A Leucine-rich repeat-con 99.9 2.3E-25 8E-30 241.2 1.1 252 350-603 3-300 (362)
86 4glp_A Monocyte differentiatio 99.9 1.5E-23 5E-28 222.0 14.8 232 314-576 63-307 (310)
87 2xwt_C Thyrotropin receptor; s 99.9 4E-23 1.4E-27 209.8 17.3 198 369-573 30-236 (239)
88 2ast_B S-phase kinase-associat 99.9 1.4E-24 4.6E-29 233.0 5.4 212 60-302 34-257 (336)
89 3m19_A Variable lymphocyte rec 99.9 1.1E-22 3.7E-27 208.2 18.8 180 395-602 15-194 (251)
90 2ast_B S-phase kinase-associat 99.9 5.3E-24 1.8E-28 228.4 6.4 250 347-605 49-311 (336)
91 1h6u_A Internalin H; cell adhe 99.9 1.2E-22 4.3E-27 214.3 15.7 194 391-601 38-231 (308)
92 3goz_A Leucine-rich repeat-con 99.9 2.5E-24 8.7E-29 233.1 2.5 269 80-367 3-306 (362)
93 2ca6_A RAN GTPase-activating p 99.9 4.3E-24 1.5E-28 233.7 2.3 238 341-580 28-320 (386)
94 3cvr_A Invasion plasmid antige 99.9 7.1E-23 2.4E-27 231.7 11.5 209 52-291 32-253 (571)
95 2o6s_A Variable lymphocyte rec 99.9 5.1E-22 1.7E-26 197.0 14.8 181 62-264 6-186 (208)
96 1h6u_A Internalin H; cell adhe 99.9 1E-21 3.6E-26 207.2 16.1 191 371-578 42-232 (308)
97 4ay9_X Follicle-stimulating ho 99.9 1.7E-21 5.9E-26 209.6 15.0 244 63-325 9-256 (350)
98 4ay9_X Follicle-stimulating ho 99.9 7E-21 2.4E-25 204.9 19.0 224 370-598 30-257 (350)
99 3cvr_A Invasion plasmid antige 99.9 4.5E-21 1.5E-25 217.0 17.0 189 371-588 60-255 (571)
100 2o6s_A Variable lymphocyte rec 99.8 6.9E-21 2.4E-25 188.8 14.5 181 102-293 10-190 (208)
101 3e6j_A Variable lymphocyte rec 99.8 1.1E-20 3.9E-25 190.0 15.4 166 54-235 10-175 (229)
102 2v70_A SLIT-2, SLIT homolog 2 99.8 1E-20 3.6E-25 188.9 11.4 156 446-605 15-171 (220)
103 2v9t_B SLIT homolog 2 protein 99.8 2.8E-20 9.5E-25 185.8 11.7 155 446-604 15-169 (220)
104 4b8c_D Glucose-repressible alc 99.8 1.8E-21 6.3E-26 228.6 2.9 230 30-278 129-369 (727)
105 2xot_A Amphoterin-induced prot 99.8 8.5E-20 2.9E-24 197.2 15.3 178 397-602 21-204 (361)
106 2v70_A SLIT-2, SLIT homolog 2 99.8 3.3E-19 1.1E-23 178.0 15.4 135 445-580 35-170 (220)
107 2xot_A Amphoterin-induced prot 99.8 2.2E-19 7.5E-24 194.0 14.6 180 372-576 20-202 (361)
108 3e6j_A Variable lymphocyte rec 99.8 6.4E-19 2.2E-23 177.2 16.6 155 445-604 22-176 (229)
109 2v9t_B SLIT homolog 2 protein 99.8 5.3E-19 1.8E-23 176.5 15.9 153 397-577 14-166 (220)
110 1h6t_A Internalin B; cell adhe 99.8 1.7E-19 5.7E-24 188.5 12.8 187 374-601 28-214 (291)
111 1m9s_A Internalin B; cell inva 99.8 1.7E-19 5.7E-24 206.6 13.8 172 391-577 40-211 (605)
112 1h6t_A Internalin B; cell adhe 99.8 1.3E-19 4.4E-24 189.4 11.0 169 370-577 46-214 (291)
113 1dce_A Protein (RAB geranylger 99.8 1.4E-21 4.9E-26 222.4 -4.3 224 63-310 285-551 (567)
114 1m9s_A Internalin B; cell inva 99.8 6.1E-19 2.1E-23 201.9 14.6 190 100-306 22-211 (605)
115 1dce_A Protein (RAB geranylger 99.8 1.3E-21 4.5E-26 222.7 -8.1 105 495-604 445-550 (567)
116 1w8a_A SLIT protein; signaling 99.8 4.2E-19 1.4E-23 173.2 8.7 133 469-605 11-144 (192)
117 4asz_A BDNF/NT-3 growth factor 99.8 5.1E-19 1.7E-23 184.0 9.6 102 703-809 12-145 (299)
118 4aoj_A High affinity nerve gro 99.8 1.3E-18 4.4E-23 183.6 10.8 101 704-809 41-175 (329)
119 4ezg_A Putative uncharacterize 99.8 3.5E-18 1.2E-22 167.5 12.6 155 415-601 41-195 (197)
120 4gt4_A Tyrosine-protein kinase 99.8 1.3E-18 4.4E-23 181.8 9.6 101 704-809 26-162 (308)
121 4b8c_D Glucose-repressible alc 99.7 2.5E-19 8.4E-24 210.5 3.6 194 400-605 207-409 (727)
122 4ezg_A Putative uncharacterize 99.7 1.1E-17 3.7E-22 164.1 13.7 153 120-281 41-194 (197)
123 1xeu_A Internalin C; cellular 99.7 2.1E-18 7.1E-23 177.2 8.3 171 392-602 17-187 (263)
124 3omv_A RAF proto-oncogene seri 99.7 2.4E-18 8.2E-23 178.9 7.8 97 699-809 31-149 (307)
125 1xeu_A Internalin C; cellular 99.7 4.5E-18 1.5E-22 174.7 9.5 171 97-283 17-187 (263)
126 3sb4_A Hypothetical leucine ri 99.7 1.1E-17 3.8E-22 178.2 10.3 102 370-473 226-328 (329)
127 1w8a_A SLIT protein; signaling 99.7 4.1E-17 1.4E-21 159.1 13.3 132 445-580 11-143 (192)
128 4b9d_A Serine/threonine-protei 99.7 1.1E-17 3.8E-22 176.4 9.2 98 703-809 23-142 (350)
129 4g3f_A NF-kappa-beta-inducing 99.7 1.1E-17 3.9E-22 175.5 8.6 96 703-809 57-167 (336)
130 4aw0_A HPDK1, 3-phosphoinositi 99.7 1.1E-17 3.9E-22 173.3 8.0 95 704-809 32-149 (311)
131 3hmm_A TGF-beta receptor type- 99.7 1.6E-17 5.3E-22 174.0 8.4 96 704-809 3-117 (303)
132 4fih_A Serine/threonine-protei 99.7 1.7E-17 5.9E-22 174.6 8.5 94 704-809 74-187 (346)
133 3sb4_A Hypothetical leucine ri 99.7 1.1E-16 3.6E-21 170.7 14.5 263 314-594 24-328 (329)
134 3ubd_A Ribosomal protein S6 ki 99.7 2.4E-17 8.2E-22 170.9 8.4 97 704-809 24-143 (304)
135 2wfh_A SLIT homolog 2 protein 99.7 3.4E-17 1.2E-21 159.6 8.9 131 469-604 13-143 (193)
136 3fpq_A Serine/threonine-protei 99.7 3E-17 1E-21 169.3 8.6 96 707-809 29-146 (290)
137 2ell_A Acidic leucine-rich nuc 99.7 9.1E-17 3.1E-21 153.1 10.8 133 98-232 23-160 (168)
138 4fie_A Serine/threonine-protei 99.7 3.9E-17 1.3E-21 176.4 8.7 95 703-809 150-264 (423)
139 4ase_A Vascular endothelial gr 99.7 2.2E-17 7.5E-22 175.6 6.5 111 695-809 55-202 (353)
140 2ell_A Acidic leucine-rich nuc 99.7 2.2E-16 7.4E-21 150.5 12.1 133 466-601 24-161 (168)
141 2o6r_A Variable lymphocyte rec 99.7 4E-16 1.4E-20 150.0 13.0 132 469-604 10-141 (177)
142 2je0_A Acidic leucine-rich nuc 99.7 1.7E-16 5.7E-21 147.9 9.3 128 466-596 17-149 (149)
143 2je0_A Acidic leucine-rich nuc 99.7 8E-17 2.7E-21 150.1 7.1 126 99-226 17-147 (149)
144 4g31_A Eukaryotic translation 99.6 2E-16 6.7E-21 164.8 9.1 103 704-809 5-135 (299)
145 2wfh_A SLIT homolog 2 protein 99.6 1.1E-15 3.6E-20 149.0 13.3 109 99-208 31-139 (193)
146 3hyh_A Carbon catabolite-derep 99.6 1.7E-16 6E-21 162.1 8.0 94 704-809 13-129 (275)
147 2o6r_A Variable lymphocyte rec 99.6 2E-15 6.7E-20 145.1 13.6 133 63-210 7-139 (177)
148 3v5w_A G-protein coupled recep 99.6 1.7E-15 5.7E-20 171.2 9.3 96 703-809 188-309 (689)
149 1a9n_A U2A', U2A'; complex (nu 99.6 4.9E-15 1.7E-19 142.1 10.4 133 462-601 15-154 (176)
150 4b99_A Mitogen-activated prote 99.6 2.9E-15 9.8E-20 162.2 9.5 99 704-809 54-175 (398)
151 1ds9_A Outer arm dynein; leuci 99.6 3.7E-17 1.3E-21 160.4 -6.2 132 461-600 43-185 (198)
152 1a9n_A U2A', U2A'; complex (nu 99.6 4.4E-15 1.5E-19 142.5 8.2 132 94-231 14-152 (176)
153 4fdw_A Leucine rich hypothetic 99.6 1.5E-13 5E-18 149.5 20.9 196 395-600 158-358 (401)
154 3uto_A Twitchin; kinase, muscl 99.5 5.5E-15 1.9E-19 168.2 9.1 97 703-809 156-272 (573)
155 3g39_A Variable lymphocyte rec 99.5 2.2E-14 7.5E-19 136.5 11.4 108 494-604 12-119 (170)
156 1ds9_A Outer arm dynein; leuci 99.5 6.9E-17 2.4E-21 158.4 -6.7 155 390-576 14-185 (198)
157 4f9c_A Cell division cycle 7-r 99.5 1.3E-14 4.3E-19 155.4 10.2 97 701-809 18-134 (361)
158 4fs7_A Uncharacterized protein 99.5 1.2E-12 4.2E-17 142.9 24.2 200 92-302 64-263 (394)
159 4aw2_A Serine/threonine-protei 99.5 1.4E-14 4.8E-19 159.4 8.7 105 695-809 65-192 (437)
160 2r9u_A Variable lymphocyte rec 99.5 5.2E-14 1.8E-18 134.4 11.5 107 494-603 15-121 (174)
161 4fdw_A Leucine rich hypothetic 99.5 4.8E-13 1.7E-17 145.4 20.7 242 346-600 136-383 (401)
162 3uim_A Brassinosteroid insensi 99.5 2.9E-14 9.7E-19 151.7 10.6 112 690-809 16-148 (326)
163 2qkw_B Protein kinase; three-h 99.5 2.5E-14 8.5E-19 151.8 8.5 108 694-809 29-156 (321)
164 3g39_A Variable lymphocyte rec 99.5 1.1E-13 3.9E-18 131.5 11.6 104 103-209 13-116 (170)
165 4fs7_A Uncharacterized protein 99.5 3.1E-12 1E-16 139.7 24.5 67 183-251 59-125 (394)
166 3v8s_A RHO-associated protein 99.5 4.2E-14 1.4E-18 154.3 8.0 102 696-809 61-185 (410)
167 3s95_A LIMK-1, LIM domain kina 99.5 1.2E-13 4E-18 145.8 10.4 97 703-809 9-125 (310)
168 2r9u_A Variable lymphocyte rec 99.5 2.7E-13 9.1E-18 129.4 11.6 103 103-208 16-118 (174)
169 2c30_A Serine/threonine-protei 99.5 1.7E-13 5.6E-18 145.3 11.2 106 692-809 23-158 (321)
170 2vd5_A DMPK protein; serine/th 99.4 7E-14 2.4E-18 152.7 8.0 106 694-809 51-179 (412)
171 3kmu_A ILK, integrin-linked ki 99.4 2E-13 6.9E-18 140.8 10.3 98 703-809 9-128 (271)
172 1tki_A Titin; serine kinase, m 99.4 1.9E-13 6.5E-18 144.7 10.2 97 703-809 4-119 (321)
173 2nru_A Interleukin-1 receptor- 99.4 2E-13 6.9E-18 143.7 10.2 110 690-809 11-150 (307)
174 3fxz_A Serine/threonine-protei 99.4 1.8E-13 6E-18 143.4 9.5 95 703-809 19-133 (297)
175 2yab_A Death-associated protei 99.4 2.4E-13 8.2E-18 146.1 10.6 96 703-809 11-132 (361)
176 3c0i_A Peripheral plasma membr 99.4 9E-14 3.1E-18 149.3 7.3 99 704-809 24-147 (351)
177 3cbl_A C-FES, proto-oncogene t 99.4 6.1E-14 2.1E-18 152.2 5.8 101 699-809 109-230 (377)
178 3tki_A Serine/threonine-protei 99.4 1.8E-13 6.1E-18 145.2 9.1 96 703-809 6-122 (323)
179 3zgw_A Maternal embryonic leuc 99.4 1.7E-13 5.9E-18 146.3 9.1 97 702-809 8-125 (347)
180 3fe3_A MAP/microtubule affinit 99.4 1.2E-13 4E-18 146.7 7.6 97 702-809 13-131 (328)
181 1fot_A TPK1 delta, CAMP-depend 99.4 2.1E-13 7.1E-18 144.0 9.5 96 703-809 5-123 (318)
182 2qol_A Ephrin receptor; recept 99.4 1.5E-13 5.1E-18 148.7 8.5 98 704-809 45-164 (373)
183 1o6l_A RAC-beta serine/threoni 99.4 2E-13 6.9E-18 145.3 9.2 96 703-809 4-122 (337)
184 2r5t_A Serine/threonine-protei 99.4 2.5E-13 8.4E-18 146.6 9.5 96 703-809 37-156 (373)
185 3soc_A Activin receptor type-2 99.4 2.8E-13 9.7E-18 143.6 9.8 98 702-809 22-138 (322)
186 2psq_A Fibroblast growth facto 99.4 2.5E-13 8.6E-18 146.8 9.5 102 703-809 80-220 (370)
187 3uqc_A Probable conserved tran 99.4 3.1E-13 1.1E-17 140.5 9.5 93 704-809 31-146 (286)
188 3kul_A Ephrin type-A receptor 99.4 3E-13 1E-17 143.6 9.5 98 704-809 49-168 (325)
189 3l9p_A Anaplastic lymphoma kin 99.4 1.5E-13 5.3E-18 148.4 7.3 102 703-809 70-198 (367)
190 4fr4_A YANK1, serine/threonine 99.4 3E-13 1E-17 146.2 9.5 96 703-809 14-132 (384)
191 1xjd_A Protein kinase C, theta 99.4 2.3E-13 8E-18 145.2 8.4 98 701-809 14-135 (345)
192 4eqm_A Protein kinase; transfe 99.4 3.1E-13 1E-17 141.3 9.1 95 704-809 11-128 (294)
193 1x8b_A WEE1HU, WEE1-like prote 99.4 1.4E-13 4.7E-18 143.5 6.2 100 703-809 10-132 (289)
194 1luf_A Muscle-specific tyrosin 99.4 2.7E-13 9.3E-18 145.2 8.7 105 700-809 43-191 (343)
195 3vhe_A Vascular endothelial gr 99.4 2.6E-13 8.9E-18 146.4 8.4 112 694-809 12-210 (359)
196 3q4u_A Activin receptor type-1 99.4 4E-13 1.4E-17 141.0 9.6 97 703-809 7-122 (301)
197 2w4o_A Calcium/calmodulin-depe 99.4 4.8E-13 1.6E-17 143.5 10.4 96 703-809 52-165 (349)
198 3uc3_A Serine/threonine-protei 99.4 2.7E-13 9.3E-18 146.0 8.5 96 703-809 19-133 (361)
199 2bdw_A Hypothetical protein K1 99.4 3.5E-13 1.2E-17 145.2 9.2 96 703-809 28-145 (362)
200 1kob_A Twitchin; kinase, intra 99.4 5.6E-13 1.9E-17 144.6 10.8 97 703-809 50-166 (387)
201 2qr7_A Ribosomal protein S6 ki 99.4 3.7E-13 1.3E-17 143.7 9.3 96 703-809 21-133 (342)
202 1opk_A P150, C-ABL, proto-onco 99.4 1E-13 3.5E-18 155.9 5.1 101 700-809 216-335 (495)
203 3qd2_B Eukaryotic translation 99.4 4.1E-13 1.4E-17 143.0 9.6 103 704-809 6-181 (332)
204 3txo_A PKC-L, NPKC-ETA, protei 99.4 3.3E-13 1.1E-17 144.6 8.8 97 702-809 21-141 (353)
205 4hcu_A Tyrosine-protein kinase 99.4 5.2E-13 1.8E-17 137.6 10.0 96 703-809 9-123 (269)
206 4dc2_A Protein kinase C IOTA t 99.4 3.1E-13 1.1E-17 146.6 8.5 96 703-809 51-170 (396)
207 3is5_A Calcium-dependent prote 99.4 2E-13 6.9E-18 142.0 6.7 99 704-809 22-141 (285)
208 3ugc_A Tyrosine-protein kinase 99.4 2.5E-13 8.5E-18 142.1 7.4 101 703-809 9-131 (295)
209 4euu_A Serine/threonine-protei 99.4 4.3E-13 1.5E-17 142.1 9.2 100 704-809 9-129 (319)
210 1rdq_E PKA C-alpha, CAMP-depen 99.4 4.3E-13 1.5E-17 143.6 9.3 95 704-809 41-158 (350)
211 2y0a_A Death-associated protei 99.4 5E-13 1.7E-17 141.9 9.7 95 704-809 11-131 (326)
212 3p86_A Serine/threonine-protei 99.4 1.2E-13 4.1E-18 145.4 4.7 101 699-809 32-154 (309)
213 3a8x_A Protein kinase C IOTA t 99.4 3.5E-13 1.2E-17 144.0 8.4 95 704-809 9-127 (345)
214 3c4z_A Rhodopsin kinase; Ser/T 99.4 6E-13 2E-17 149.8 10.2 100 703-809 184-306 (543)
215 2w5a_A Serine/threonine-protei 99.4 3.3E-13 1.1E-17 139.9 6.8 102 703-809 5-128 (279)
216 2acx_A G protein-coupled recep 99.4 7E-13 2.4E-17 149.6 9.9 98 703-809 183-303 (576)
217 2y94_A 5'-AMP-activated protei 99.4 7.7E-13 2.6E-17 147.1 10.1 96 703-809 15-133 (476)
218 3g2f_A Bone morphogenetic prot 99.4 6.9E-13 2.4E-17 141.6 9.3 98 703-809 12-128 (336)
219 3gni_B Strad alpha; kinase fol 99.4 6.7E-13 2.3E-17 144.8 9.3 98 703-809 24-145 (389)
220 3cok_A Serine/threonine-protei 99.4 9.1E-13 3.1E-17 136.5 9.9 97 703-809 10-129 (278)
221 4fvq_A Tyrosine-protein kinase 99.4 3.9E-13 1.3E-17 140.2 7.2 99 703-809 7-130 (289)
222 1fvr_A Tyrosine-protein kinase 99.4 1E-12 3.4E-17 139.8 10.4 101 704-809 25-159 (327)
223 3gen_A Tyrosine-protein kinase 99.4 3.7E-13 1.3E-17 139.8 7.0 101 698-809 18-137 (283)
224 3p1a_A MYT1 kinase, membrane-a 99.4 2.5E-13 8.6E-18 143.3 5.7 95 704-809 57-174 (311)
225 3kfa_A Tyrosine-protein kinase 99.4 2.2E-13 7.6E-18 142.0 5.2 103 698-809 7-128 (288)
226 4ejn_A RAC-alpha serine/threon 99.4 6.5E-13 2.2E-17 147.6 8.9 96 703-809 147-265 (446)
227 2i0e_A Protein kinase C-beta I 99.4 5.6E-13 1.9E-17 142.7 8.0 97 702-809 18-138 (353)
228 3kn6_A Ribosomal protein S6 ki 99.4 6.3E-13 2.1E-17 141.1 8.2 90 709-809 16-123 (325)
229 3fdn_A Serine/threonine-protei 99.4 7.5E-13 2.6E-17 137.2 8.4 96 703-809 8-126 (279)
230 4eut_A Serine/threonine-protei 99.4 7.5E-13 2.6E-17 144.6 8.6 100 704-809 9-129 (396)
231 1k9a_A Carboxyl-terminal SRC k 99.4 4.5E-13 1.5E-17 148.9 6.8 101 699-809 188-306 (450)
232 3i6u_A CDS1, serine/threonine- 99.4 1.2E-12 4.1E-17 144.0 10.1 96 702-809 133-256 (419)
233 3soa_A Calcium/calmodulin-depe 99.4 6.8E-13 2.3E-17 146.5 8.1 96 703-809 10-127 (444)
234 3ork_A Serine/threonine protei 99.4 4.9E-13 1.7E-17 141.1 6.6 100 703-809 11-133 (311)
235 2ivs_A Proto-oncogene tyrosine 99.4 8.6E-13 3E-17 139.3 8.5 103 702-809 21-167 (314)
236 1rjb_A FL cytokine receptor; k 99.4 7.6E-13 2.6E-17 141.8 8.1 106 699-809 40-189 (344)
237 3c1x_A Hepatocyte growth facto 99.4 1.2E-12 4.2E-17 141.4 9.7 98 705-809 90-209 (373)
238 3e7e_A HBUB1, BUB1A, mitotic c 99.3 4.9E-13 1.7E-17 144.5 6.6 104 701-809 62-189 (365)
239 2buj_A Serine/threonine-protei 99.3 7E-13 2.4E-17 140.3 7.6 104 703-809 28-151 (317)
240 1nxk_A MAP kinase-activated pr 99.3 8.1E-13 2.8E-17 144.3 8.3 101 704-809 61-178 (400)
241 3f3z_A Calcium/calmodulin-depe 99.3 9E-13 3.1E-17 136.5 8.2 95 704-809 9-123 (277)
242 1mp8_A Focal adhesion kinase 1 99.3 5.2E-13 1.8E-17 138.6 6.4 99 702-809 13-133 (281)
243 3eb0_A Putative uncharacterize 99.3 7.3E-13 2.5E-17 144.1 7.8 106 701-809 4-158 (383)
244 2ozo_A Tyrosine-protein kinase 99.3 1.5E-12 5.2E-17 150.0 10.8 96 705-809 336-453 (613)
245 3dtc_A Mitogen-activated prote 99.3 8.3E-13 2.8E-17 136.2 7.8 93 703-809 6-122 (271)
246 2ifg_A High affinity nerve gro 99.3 7.1E-13 2.4E-17 142.2 7.5 109 63-185 8-117 (347)
247 3sxs_A Cytoplasmic tyrosine-pr 99.3 6.5E-13 2.2E-17 136.8 6.9 96 703-809 7-121 (268)
248 1qcf_A Haematopoetic cell kina 99.3 3.8E-13 1.3E-17 149.7 5.4 102 697-809 181-301 (454)
249 3h4j_B AMPK kdaid, SNF1-like p 99.3 9E-13 3.1E-17 140.1 8.0 95 703-809 8-125 (336)
250 3un9_A NLR family member X1; l 99.3 3.7E-14 1.3E-18 152.7 -2.9 64 514-577 182-253 (372)
251 2x4f_A Myosin light chain kina 99.3 8.6E-13 3E-17 142.7 7.8 94 706-809 91-204 (373)
252 2wqm_A Serine/threonine-protei 99.3 1.1E-12 3.7E-17 138.3 8.3 100 703-809 31-153 (310)
253 3fme_A Dual specificity mitoge 99.3 8.9E-13 3E-17 137.5 7.4 99 703-809 6-126 (290)
254 1u59_A Tyrosine-protein kinase 99.3 1.7E-12 5.7E-17 135.2 9.4 97 704-809 9-127 (287)
255 2rku_A Serine/threonine-protei 99.3 1.3E-12 4.3E-17 136.7 8.5 96 703-809 14-132 (294)
256 2yex_A Serine/threonine-protei 99.3 1.5E-12 5.3E-17 134.6 9.1 95 704-809 7-122 (276)
257 3lij_A Calcium/calmodulin depe 99.3 1.2E-12 4.1E-17 147.4 8.7 95 704-809 37-153 (494)
258 3tt0_A Basic fibroblast growth 99.3 1.4E-12 4.7E-17 141.8 8.8 103 702-809 67-208 (382)
259 2pvf_A Fibroblast growth facto 99.3 1.5E-12 5.1E-17 138.8 8.9 103 702-809 33-174 (334)
260 3a62_A Ribosomal protein S6 ki 99.3 9.6E-13 3.3E-17 139.8 7.3 98 703-809 16-138 (327)
261 3eqc_A Dual specificity mitoge 99.3 1.5E-12 5.2E-17 140.4 8.9 96 703-809 32-148 (360)
262 1t4h_A Serine/threonine-protei 99.3 2E-12 6.8E-17 134.9 9.5 98 705-809 27-146 (290)
263 2eva_A TAK1 kinase - TAB1 chim 99.3 1E-12 3.4E-17 138.3 7.3 94 704-809 8-119 (307)
264 2a2a_A Death-associated protei 99.3 1.4E-12 4.7E-17 138.3 8.4 95 704-809 12-132 (321)
265 3mdy_A Bone morphogenetic prot 99.3 1.5E-12 5E-17 139.1 8.6 98 702-809 35-151 (337)
266 3t9t_A Tyrosine-protein kinase 99.3 9.7E-13 3.3E-17 135.4 7.0 96 703-809 7-121 (267)
267 1t46_A HOMO sapiens V-KIT hard 99.3 9.2E-13 3.2E-17 139.0 6.9 104 701-809 20-162 (313)
268 2vwi_A Serine/threonine-protei 99.3 2.3E-12 8E-17 135.2 10.0 102 701-809 12-138 (303)
269 4agu_A Cyclin-dependent kinase 99.3 1.7E-12 5.7E-17 137.0 8.9 95 704-809 3-119 (311)
270 3o0g_A Cell division protein k 99.3 2E-12 6.9E-17 134.9 9.4 95 704-809 2-118 (292)
271 2yfx_A Tyrosine-protein kinase 99.3 9.9E-13 3.4E-17 139.8 7.1 102 703-809 29-157 (327)
272 3an0_A Dual specificity mitoge 99.3 1E-12 3.5E-17 140.5 7.2 101 701-809 48-170 (340)
273 3bhy_A Death-associated protei 99.3 1.4E-12 4.9E-17 135.4 8.1 95 704-809 5-125 (283)
274 2h6d_A 5'-AMP-activated protei 99.3 2.1E-12 7.2E-17 133.6 9.3 96 703-809 10-128 (276)
275 3hko_A Calcium/calmodulin-depe 99.3 6.1E-13 2.1E-17 142.6 5.4 104 699-809 21-185 (345)
276 1xbb_A Tyrosine-protein kinase 99.3 1.1E-12 3.8E-17 136.9 7.2 97 703-809 15-134 (291)
277 1mqb_A Ephrin type-A receptor 99.3 1.6E-12 5.5E-17 138.5 8.6 98 704-809 44-164 (333)
278 2owb_A Serine/threonine-protei 99.3 1.5E-12 5.2E-17 138.8 8.3 96 703-809 40-158 (335)
279 2clq_A Mitogen-activated prote 99.3 2.5E-12 8.6E-17 134.4 9.8 97 705-809 23-139 (295)
280 3brb_A Proto-oncogene tyrosine 99.3 1.7E-12 5.7E-17 137.1 8.5 112 698-809 28-164 (313)
281 3llt_A Serine/threonine kinase 99.3 1.5E-12 5.1E-17 140.5 8.3 108 692-809 23-154 (360)
282 3q5i_A Protein kinase; CDPK, m 99.3 1.9E-12 6.3E-17 146.3 9.3 96 703-809 35-163 (504)
283 3op5_A Serine/threonine-protei 99.3 9.7E-13 3.3E-17 142.1 6.7 103 702-809 33-169 (364)
284 3kk8_A Calcium/calmodulin depe 99.3 1.6E-12 5.6E-17 135.0 8.3 96 703-809 5-122 (284)
285 2ifg_A High affinity nerve gro 99.3 3.8E-12 1.3E-16 136.5 11.3 106 495-603 12-119 (347)
286 3kex_A Receptor tyrosine-prote 99.3 1.1E-12 3.8E-17 139.2 7.1 97 704-809 13-132 (325)
287 1fmk_A C-SRC, P60-SRC, tyrosin 99.3 5.4E-13 1.8E-17 148.3 4.7 102 697-809 177-297 (452)
288 2pmi_A Negative RE, cyclin-dep 99.3 1.7E-12 5.8E-17 137.2 8.2 99 703-809 4-125 (317)
289 2zv2_A Calcium/calmodulin-depe 99.3 2.6E-12 9E-17 134.5 9.5 97 703-809 12-154 (298)
290 2ac3_A MAP kinase-interacting 99.3 2.4E-12 8.2E-17 136.1 9.3 95 704-809 12-128 (316)
291 2vgo_A Serine/threonine-protei 99.3 1.7E-12 5.9E-17 134.9 8.1 95 704-809 14-131 (284)
292 3un9_A NLR family member X1; l 99.3 1.9E-13 6.4E-18 147.2 0.7 160 418-601 72-253 (372)
293 3mtl_A Cell division protein k 99.3 2.5E-12 8.5E-17 136.5 9.4 95 704-809 2-117 (324)
294 4f0f_A Serine/threonine-protei 99.3 2.8E-12 9.5E-17 133.5 9.6 95 703-809 18-139 (287)
295 3f66_A Hepatocyte growth facto 99.3 2.2E-12 7.7E-17 135.0 8.9 99 704-809 25-145 (298)
296 4e5w_A Tyrosine-protein kinase 99.3 2.4E-12 8.1E-17 135.1 9.1 100 704-809 21-143 (302)
297 3nyv_A Calmodulin-domain prote 99.3 2.3E-12 7.8E-17 144.9 9.4 95 704-809 26-143 (484)
298 2j7t_A Serine/threonine-protei 99.3 1.8E-12 6.1E-17 136.1 8.0 98 702-809 17-134 (302)
299 3gxj_A TGF-beta receptor type- 99.3 7.6E-13 2.6E-17 139.0 5.1 96 704-809 3-117 (303)
300 3dls_A PAS domain-containing s 99.3 3.1E-12 1.1E-16 136.3 9.8 96 703-809 23-147 (335)
301 2a19_B Interferon-induced, dou 99.3 1.3E-12 4.6E-17 135.6 6.8 102 704-809 11-139 (284)
302 2h34_A Serine/threonine-protei 99.3 2.2E-12 7.5E-17 135.9 8.4 96 703-809 33-151 (309)
303 1p4o_A Insulin-like growth fac 99.3 1.4E-12 4.9E-17 138.2 7.0 110 695-809 16-155 (322)
304 3a7i_A MST3 kinase, serine/thr 99.3 3.2E-12 1.1E-16 134.2 9.6 95 703-809 21-136 (303)
305 3mwu_A Calmodulin-domain prote 99.3 1.7E-12 6E-17 145.8 8.0 95 704-809 22-138 (486)
306 3niz_A Rhodanese family protei 99.3 2.6E-12 8.8E-17 135.4 8.7 95 703-809 20-136 (311)
307 3m2w_A MAP kinase-activated pr 99.3 2.5E-12 8.4E-17 134.8 8.5 101 704-809 17-134 (299)
308 2izr_A Casein kinase I isoform 99.3 2E-12 6.9E-17 137.6 7.9 95 704-809 9-122 (330)
309 2xir_A Vascular endothelial gr 99.3 1.7E-12 5.9E-17 137.1 7.4 111 695-809 18-165 (316)
310 1zy4_A Serine/threonine-protei 99.3 2.5E-12 8.5E-17 134.9 8.4 102 703-809 5-133 (303)
311 3fhr_A MAP kinase-activated pr 99.3 2.6E-12 8.7E-17 137.1 8.6 102 703-809 27-145 (336)
312 3gbz_A Kinase, CMGC CDK; ssgci 99.3 3E-12 1E-16 136.1 9.0 97 701-809 31-149 (329)
313 3lxl_A Tyrosine-protein kinase 99.3 2.4E-12 8.4E-17 136.7 8.2 100 704-809 23-144 (327)
314 1ob3_A PFPK5, cell division co 99.3 3.9E-12 1.3E-16 132.5 9.5 94 704-809 2-117 (288)
315 3lb7_A RAF proto-oncogene seri 99.3 3.6E-12 1.2E-16 134.0 9.3 94 702-809 34-149 (307)
316 1qpc_A LCK kinase; alpha beta 99.3 9.6E-13 3.3E-17 136.4 4.8 100 699-809 8-126 (279)
317 3g33_A Cell division protein k 99.3 3.7E-12 1.3E-16 134.1 9.2 102 703-809 8-137 (308)
318 3com_A Serine/threonine-protei 99.3 2.8E-12 9.7E-17 135.4 8.3 98 702-809 27-142 (314)
319 2ycf_A Serine/threonine-protei 99.3 3.1E-12 1E-16 135.7 8.5 95 703-809 9-131 (322)
320 2h8h_A Proto-oncogene tyrosine 99.3 7.8E-13 2.7E-17 150.1 4.0 102 697-809 260-380 (535)
321 2jam_A Calcium/calmodulin-depe 99.3 2.8E-12 9.6E-17 134.7 8.0 95 704-809 9-123 (304)
322 3lxp_A Non-receptor tyrosine-p 99.3 5E-12 1.7E-16 133.7 9.8 96 706-809 33-151 (318)
323 3cc6_A Protein tyrosine kinase 99.3 2.6E-12 8.8E-17 133.3 7.4 99 702-809 10-130 (281)
324 3rp9_A Mitogen-activated prote 99.3 3E-12 1E-16 142.9 8.3 100 703-809 52-173 (458)
325 1u5q_A Serine/threonine protei 99.3 2.4E-12 8.2E-17 137.8 7.3 95 704-809 54-171 (348)
326 2eue_A Carbon catabolite derep 99.3 3.9E-12 1.3E-16 131.5 8.6 94 704-809 13-129 (275)
327 3poz_A Epidermal growth factor 99.3 2.8E-12 9.4E-17 136.3 7.6 97 704-809 15-134 (327)
328 2w1i_A JAK2; chromosomal rearr 99.3 4.7E-12 1.6E-16 134.5 9.3 100 704-809 41-162 (326)
329 3lm5_A Serine/threonine-protei 99.3 4.8E-12 1.6E-16 134.4 9.3 106 695-809 19-148 (327)
330 3qup_A Tyrosine-protein kinase 99.3 2.1E-12 7.2E-17 137.0 6.5 110 700-809 19-154 (323)
331 4fl3_A Tyrosine-protein kinase 99.3 3.3E-12 1.1E-16 147.5 8.6 90 710-809 375-486 (635)
332 4aaa_A Cyclin-dependent kinase 99.3 3.5E-12 1.2E-16 135.8 8.1 96 703-809 24-141 (331)
333 2y4i_B KSR2, HKSR2, kinase sup 99.3 2.8E-12 9.5E-17 135.8 7.1 100 697-809 26-147 (319)
334 4gt6_A Cell surface protein; l 99.3 5E-10 1.7E-14 122.1 25.1 113 136-251 52-168 (394)
335 2x7f_A TRAF2 and NCK-interacti 99.3 1.6E-12 5.5E-17 138.1 4.9 112 694-809 14-146 (326)
336 3n9x_A Phosphotransferase; mal 99.3 4.9E-12 1.7E-16 139.8 8.9 100 703-809 25-146 (432)
337 2i1m_A Macrophage colony-stimu 99.3 1.1E-12 3.9E-17 139.7 3.6 107 698-809 40-181 (333)
338 1vzo_A Ribosomal protein S6 ki 99.3 3.8E-12 1.3E-16 136.8 7.8 98 703-809 53-176 (355)
339 4gt6_A Cell surface protein; l 99.3 7.3E-10 2.5E-14 120.8 26.0 115 112-229 52-170 (394)
340 2wei_A Calmodulin-domain prote 99.3 4.6E-12 1.6E-16 131.9 8.0 96 703-809 21-138 (287)
341 1phk_A Phosphorylase kinase; g 99.3 4.7E-12 1.6E-16 132.6 7.9 96 703-809 16-141 (298)
342 1b6c_B TGF-B superfamily recep 99.3 7E-12 2.4E-16 134.1 9.3 98 702-809 40-156 (342)
343 2r3i_A Cell division protein k 99.3 7.7E-12 2.6E-16 131.0 9.4 96 704-809 3-120 (299)
344 3og7_A AKAP9-BRAF fusion prote 99.3 5E-12 1.7E-16 131.7 7.8 95 701-809 21-137 (289)
345 3pls_A Macrophage-stimulating 99.3 6.3E-12 2.1E-16 131.6 8.5 98 705-809 22-141 (298)
346 3pfq_A PKC-B, PKC-beta, protei 99.3 5.8E-12 2E-16 146.6 9.0 97 702-809 339-459 (674)
347 3pg1_A Mitogen-activated prote 99.2 9.9E-12 3.4E-16 134.1 9.7 108 695-809 13-151 (362)
348 2wtk_C Serine/threonine-protei 99.2 1.1E-11 3.6E-16 130.3 9.7 99 703-809 4-126 (305)
349 2y7j_A Phosphorylase B kinase 99.2 6.5E-12 2.2E-16 135.5 8.1 98 701-809 91-217 (365)
350 2pml_X PFPK7, Ser/Thr protein 99.2 9.6E-12 3.3E-16 133.4 9.0 96 703-809 30-168 (348)
351 1ua2_A CAK, cell division prot 99.2 6.2E-12 2.1E-16 134.7 7.3 98 701-809 7-129 (346)
352 2b9h_A MAP kinase FUS3, mitoge 99.2 8.7E-12 3E-16 134.0 8.4 99 703-809 10-129 (353)
353 2v62_A Serine/threonine-protei 99.2 5.1E-12 1.7E-16 135.3 6.3 100 704-809 37-168 (345)
354 3lzb_A Epidermal growth factor 99.2 6.9E-12 2.4E-16 133.1 7.3 97 704-809 15-134 (327)
355 2j0j_A Focal adhesion kinase 1 99.2 6.6E-12 2.3E-16 145.6 7.7 100 701-809 387-508 (656)
356 1csn_A Casein kinase-1; phosph 99.2 1.3E-11 4.3E-16 129.3 9.2 96 703-809 9-123 (298)
357 1blx_A Cyclin-dependent kinase 99.2 1.1E-11 3.7E-16 131.6 8.8 104 702-809 9-137 (326)
358 1j1b_A Glycogen synthase kinas 99.2 6.4E-12 2.2E-16 138.2 7.0 103 704-809 54-173 (420)
359 1byg_A CSK, protein (C-termina 99.2 3.3E-12 1.1E-16 132.3 4.3 97 703-809 20-134 (278)
360 2i6l_A Mitogen-activated prote 99.2 1.5E-11 5.2E-16 130.0 9.2 98 704-809 11-137 (320)
361 3qyz_A Mitogen-activated prote 99.2 1.2E-11 4E-16 133.5 8.2 100 702-809 25-145 (364)
362 2pzi_A Probable serine/threoni 99.2 1.2E-11 4E-16 145.0 8.6 99 704-809 80-199 (681)
363 3oz6_A Mitogen-activated prote 99.2 1.2E-11 4.1E-16 134.8 8.0 97 702-809 7-126 (388)
364 3ttj_A Mitogen-activated prote 99.2 1.6E-11 5.4E-16 136.7 9.0 98 703-809 61-181 (464)
365 1cm8_A Phosphorylated MAP kina 99.2 1.1E-11 3.6E-16 133.9 7.3 99 703-809 24-145 (367)
366 3nsz_A CK II alpha, casein kin 99.2 2.1E-11 7.3E-16 129.6 9.3 94 704-809 36-147 (330)
367 1u46_A ACK-1, activated CDC42 99.2 1.1E-11 3.9E-16 129.1 6.3 98 703-809 17-138 (291)
368 3mi9_A Cell division protein k 99.2 2.6E-11 9E-16 130.1 9.0 101 703-809 16-141 (351)
369 2iwi_A Serine/threonine-protei 99.2 9.9E-12 3.4E-16 131.1 5.3 99 700-809 27-156 (312)
370 3aln_A Dual specificity mitoge 99.2 4.3E-11 1.5E-15 127.1 10.0 99 703-809 21-142 (327)
371 3ll6_A Cyclin G-associated kin 99.2 1.5E-11 5E-16 131.2 6.4 103 703-809 27-153 (337)
372 3e3p_A Protein kinase, putativ 99.2 2E-11 6.9E-16 131.5 7.3 109 698-809 17-146 (360)
373 2xrw_A Mitogen-activated prote 99.2 3.7E-11 1.3E-15 129.9 8.9 98 703-809 24-144 (371)
374 3kvw_A DYRK2, dual specificity 99.2 5.1E-11 1.8E-15 131.3 10.1 97 703-809 96-217 (429)
375 2vuw_A Serine/threonine-protei 99.2 3.5E-12 1.2E-16 136.1 0.5 98 703-809 19-178 (336)
376 3qa8_A MGC80376 protein; kinas 99.2 7.6E-12 2.6E-16 142.6 3.3 103 704-809 14-138 (676)
377 3rgf_A Cyclin-dependent kinase 99.2 2.8E-11 9.7E-16 132.6 7.7 100 706-809 22-145 (405)
378 2fst_X Mitogen-activated prote 99.2 2.1E-11 7.2E-16 131.4 6.5 99 703-809 28-149 (367)
379 4e7w_A Glycogen synthase kinas 99.2 2.4E-11 8.3E-16 132.4 7.0 102 704-809 40-158 (394)
380 3byv_A Rhoptry kinase; malaria 99.2 5.6E-12 1.9E-16 136.8 1.7 105 702-809 71-223 (377)
381 2dyl_A Dual specificity mitoge 99.1 3.4E-11 1.2E-15 127.3 7.6 96 703-809 24-141 (318)
382 3dbq_A Dual specificity protei 99.1 3.1E-11 1.1E-15 129.0 7.3 94 703-809 8-125 (343)
383 4hgt_A Casein kinase I isoform 99.1 4E-11 1.4E-15 125.2 8.0 98 702-809 7-122 (296)
384 2jii_A Serine/threonine-protei 99.1 1.2E-11 4E-16 132.9 4.0 99 704-809 42-176 (352)
385 4exu_A Mitogen-activated prote 99.1 4.3E-11 1.5E-15 129.4 7.8 98 703-809 41-161 (371)
386 3coi_A Mitogen-activated prote 99.1 4.5E-11 1.5E-15 128.4 7.7 98 703-809 23-143 (353)
387 2zmd_A Dual specificity protei 99.1 3.9E-11 1.4E-15 130.5 7.3 93 704-809 56-172 (390)
388 3uzp_A CKI-delta, CKID, casein 99.1 5E-11 1.7E-15 124.5 7.8 97 703-809 8-122 (296)
389 1wak_A Serine/threonine-protei 99.1 6.4E-11 2.2E-15 129.4 7.1 100 704-809 37-163 (397)
390 1z57_A Dual specificity protei 99.1 1.6E-10 5.6E-15 123.1 9.9 97 704-809 14-135 (339)
391 3a99_A Proto-oncogene serine/t 99.1 8.3E-11 2.8E-15 124.4 7.4 97 702-809 41-166 (320)
392 3sv0_A Casein kinase I-like; t 99.1 1.4E-10 4.9E-15 129.1 9.3 96 703-809 6-120 (483)
393 2vx3_A Dual specificity tyrosi 99.1 2E-10 6.8E-15 124.7 9.7 98 702-809 52-174 (382)
394 3cek_A Dual specificity protei 99.1 4.7E-11 1.6E-15 125.9 4.0 103 694-809 18-144 (313)
395 1q8y_A SR protein kinase; tran 99.0 1.1E-10 3.6E-15 126.5 5.4 100 704-809 19-148 (373)
396 3p23_A Serine/threonine-protei 99.0 1.1E-10 3.9E-15 128.5 5.7 95 703-809 23-135 (432)
397 2rio_A Serine/threonine-protei 99.0 1.5E-10 5E-15 127.9 6.2 95 706-809 17-132 (434)
398 3q60_A ROP5B; pseudokinase, tr 99.0 9.1E-11 3.1E-15 126.9 3.6 100 703-809 61-211 (371)
399 4h09_A Hypothetical leucine ri 99.0 7.2E-08 2.5E-12 104.3 25.9 146 411-586 210-355 (379)
400 2eu9_A Dual specificity protei 99.0 3.2E-10 1.1E-14 121.7 6.8 97 704-809 19-140 (355)
401 3rw6_A Nuclear RNA export fact 99.0 6.3E-12 2.1E-16 126.9 -7.0 148 61-212 76-237 (267)
402 2ra8_A Uncharacterized protein 99.0 4.4E-10 1.5E-14 119.7 6.2 84 513-598 250-341 (362)
403 2ra8_A Uncharacterized protein 98.9 2.1E-10 7.3E-15 122.1 2.7 86 217-303 250-341 (362)
404 4h09_A Hypothetical leucine ri 98.9 2.3E-07 7.8E-12 100.4 25.3 103 387-492 210-312 (379)
405 3en9_A Glycoprotease, O-sialog 98.9 1.5E-09 5.1E-14 122.7 6.2 82 707-809 339-448 (540)
406 1zar_A RIO2 kinase; serine kin 98.5 6.7E-08 2.3E-12 99.6 6.9 91 696-809 82-210 (282)
407 4azs_A Methyltransferase WBDD; 98.5 3.9E-08 1.3E-12 111.7 5.2 59 739-809 297-356 (569)
408 1io0_A Tropomodulin; LRR prote 98.5 5.4E-09 1.8E-13 100.4 -2.1 94 91-184 28-136 (185)
409 3rw6_A Nuclear RNA export fact 98.5 2.4E-08 8.1E-13 100.7 2.1 79 513-593 168-257 (267)
410 1io0_A Tropomodulin; LRR prote 98.4 5.7E-08 2E-12 93.2 2.2 120 460-600 30-164 (185)
411 3dzo_A Rhoptry kinase domain; 98.4 1.2E-07 4.2E-12 103.7 3.8 105 702-809 76-228 (413)
412 4gyi_A RIO2 kinase; protein ki 98.2 3.2E-07 1.1E-11 97.2 2.9 99 698-809 89-222 (397)
413 1zth_A RIO1 serine protein kin 98.1 1.1E-06 3.9E-11 89.1 2.6 87 705-809 48-187 (258)
414 3e4g_A ATP synthase subunit S, 97.8 5.4E-06 1.9E-10 77.2 2.7 82 148-229 62-149 (176)
415 3e4g_A ATP synthase subunit S, 97.7 1.5E-05 5.3E-10 74.2 3.5 83 515-597 61-149 (176)
416 1pgv_A TMD-1, tropomodulin TMD 97.0 6.4E-05 2.2E-09 71.4 -1.7 66 95-160 37-111 (197)
417 3rfe_A Platelet glycoprotein I 96.9 0.0013 4.5E-08 58.2 6.5 57 543-601 12-69 (130)
418 3tm0_A Aminoglycoside 3'-phosp 96.8 0.002 6.8E-08 65.1 8.0 91 701-809 11-122 (263)
419 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00067 2.3E-08 64.4 3.9 84 515-598 70-168 (197)
420 3rfe_A Platelet glycoprotein I 96.7 0.0026 8.9E-08 56.3 6.5 37 540-576 32-68 (130)
421 1nd4_A Aminoglycoside 3'-phosp 95.3 0.022 7.4E-07 57.1 6.5 86 704-809 20-124 (264)
422 3dxp_A Putative acyl-COA dehyd 95.0 0.046 1.6E-06 57.8 8.2 90 708-809 42-156 (359)
423 3d1u_A Putative fructosamine-3 92.7 0.13 4.4E-06 52.4 6.0 57 707-775 18-97 (288)
424 3r70_A Aminoglycoside phosphot 86.8 0.78 2.7E-05 47.3 6.2 83 705-809 38-142 (320)
425 4gkh_A Aminoglycoside 3'-phosp 84.4 1.6 5.3E-05 43.5 6.9 84 711-809 31-133 (272)
426 2ks1_B Epidermal growth factor 84.0 0.62 2.1E-05 31.5 2.3 27 650-676 13-39 (44)
427 3jr1_A Putative fructosamine-3 82.5 2.5 8.6E-05 43.2 7.5 60 707-775 39-118 (312)
428 3tdw_A Gentamicin resistance p 78.9 4.2 0.00014 41.4 7.8 84 709-809 24-128 (306)
429 2l2t_A Receptor tyrosine-prote 77.4 0.81 2.8E-05 30.9 1.1 26 650-675 12-37 (44)
430 3sg8_A APH(2'')-ID; antibiotic 77.0 1.8 6.3E-05 44.0 4.4 86 709-809 25-131 (304)
431 3ovc_A Hygromycin-B 4-O-kinase 74.7 3.5 0.00012 43.2 5.9 84 707-809 44-144 (362)
432 2olc_A MTR kinase, methylthior 64.8 8.2 0.00028 40.8 6.3 27 709-737 35-61 (397)
433 3ats_A Putative uncharacterize 60.5 15 0.0005 38.0 7.1 99 709-809 25-156 (357)
434 3f7w_A Putative fructosamine-3 54.3 24 0.0008 35.2 7.2 29 706-737 17-45 (288)
435 2k9y_A Ephrin type-A receptor 41.8 8.2 0.00028 25.6 0.9 10 651-660 16-25 (41)
436 2q83_A YTAA protein; 2635576, 40.9 33 0.0011 34.8 6.0 59 710-775 38-118 (346)
437 3cxl_A N-chimerin; SH2, RHO-GA 40.2 3.5 0.00012 44.8 -1.9 41 708-753 146-214 (463)
438 2lz0_A Uncharacterized protein 36.8 65 0.0022 26.1 5.9 42 409-451 11-52 (100)
439 2lz0_A Uncharacterized protein 36.6 59 0.002 26.4 5.5 38 116-154 13-50 (100)
440 2k1k_A Ephrin type-A receptor 25.6 47 0.0016 21.6 2.4 6 669-674 32-37 (38)
441 3ox7_P MH027; urokinase-type p 25.3 18 0.0006 19.5 0.3 9 61-69 6-14 (23)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.9e-85 Score=780.30 Aligned_cols=596 Identities=33% Similarity=0.480 Sum_probs=486.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCCccccCCCCCCCCCCcccccccCCCCCcEEEEECCCCCCccc---cC-------------
Q 040849 29 KSNETDQLALLEFKAKVTHDPLEVLSSWNYSRHFCQWKGVTCSPRHQRVTALLLPSLLLQGS---LS------------- 92 (809)
Q Consensus 29 ~~~~~~~~~ll~~k~~~~~~~~~~l~~W~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~---~~------------- 92 (809)
.+.++|++||++||+++. ||. .+++|+.++|||+|.||+|+ +++|++|+|++..+.|. ++
T Consensus 8 ~~~~~~~~all~~k~~~~-~~~-~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~ 83 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLP-DKN-LLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLF 83 (768)
T ss_dssp CCHHHHHHHHHHHHTTCS-CTT-SSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEE
T ss_pred cCCHHHHHHHHHHHhhCC-Ccc-cccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccccC
Confidence 457889999999999997 887 89999988899999999998 58999999999999987 44
Q ss_pred ----------ccccCCCCccEEeCCCCCCCccCCc--cccccccCCccccCCCcCcccCCccc-cCCCcCcEEEcccCCC
Q 040849 93 ----------PHIGNLSFLRVLDLKNNSFRNEIPQ--EIGYLFRLQFLWLDNNTFGGQIPDNI-SHCVNLESLRLGFNEL 159 (809)
Q Consensus 93 ----------~~l~~l~~L~~LdLs~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l 159 (809)
+.++++++|++|||++|.++|.+|. .++++++|++|+|++|.+.+.+|..+ .++++|++|+|++|.+
T Consensus 84 ~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 163 (768)
T 3rgz_A 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSI 163 (768)
T ss_dssp CTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCC
T ss_pred CcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCcc
Confidence 4678889999999999999988888 89999999999999999988888776 7888888888888888
Q ss_pred CCCCccc---ccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcc
Q 040849 160 VGKVPRK---LGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIP 236 (809)
Q Consensus 160 ~~~~p~~---l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~ 236 (809)
++..|.. +.++++|++|++++|.+++..|. .++++|++|++++|++++.+|. ++++++|++|++++|.+++.+|
T Consensus 164 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~ 240 (768)
T 3rgz_A 164 SGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFS 240 (768)
T ss_dssp EEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHH
T ss_pred CCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCccc
Confidence 8776665 55555555555555555443332 4445555555555555544443 4555555555555555554444
Q ss_pred hhccCC----------------------CCCceeccCCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCC
Q 040849 237 FSIYNL----------------------SSLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHL 294 (809)
Q Consensus 237 ~~l~~l----------------------~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 294 (809)
..+.++ ++|++|++++|.++|.+|..++..+++|++|++++|++++.+|..+..+++|
T Consensus 241 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L 320 (768)
T 3rgz_A 241 RAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLL 320 (768)
T ss_dssp HHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTC
T ss_pred HHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCc
Confidence 444444 4555555555555556666665345788888888888888888888888888
Q ss_pred ceEecCCCcceeeCCC--CCCCCCCcEEEeccccCCCCCCCchhhhh-------------------cccc--cCCccEEe
Q 040849 295 MRLTIPINGFSGKVPS--FGNLHKLQWVSISMNHLGNGEKDDLEFVN-------------------SLVN--ASRLELLG 351 (809)
Q Consensus 295 ~~L~l~~n~l~~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~-------------------~l~~--~~~L~~L~ 351 (809)
+.|++++|.+++.+|. +..+++|++|++++|.+++..+..+.... .+.. +++|+.|+
T Consensus 321 ~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~ 400 (768)
T 3rgz_A 321 ESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400 (768)
T ss_dssp CEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEE
T ss_pred cEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEE
Confidence 8888888888877775 78888888888888888755554432221 1111 56788888
Q ss_pred ccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeee
Q 040849 352 ININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFL 431 (809)
Q Consensus 352 l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 431 (809)
++.|.+.+.+|..+..+.. |++|++++|++++.+|..+.++++|++|++++|.+++.+|..+..+++|++|++++|+++
T Consensus 401 L~~n~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 479 (768)
T 3rgz_A 401 LQNNGFTGKIPPTLSNCSE-LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 479 (768)
T ss_dssp CCSSEEEEECCGGGGGCTT-CCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCCccccccCHHHhcCCC-CCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCccc
Confidence 8888888888888877754 999999999999888989999999999999999999889999999999999999999999
Q ss_pred cccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCC-
Q 040849 432 GEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSN- 510 (809)
Q Consensus 432 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~- 510 (809)
+.+|..+.++++|++|++++|++++.+|.+++.+++|++|+|++|+++|.+|..+..+++| +.|++++|+++|.+|..
T Consensus 480 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L-~~L~Ls~N~l~g~ip~~~ 558 (768)
T 3rgz_A 480 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL-IWLDLNTNLFNGTIPAAM 558 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTC-CEEECCSSEEESBCCGGG
T ss_pred CcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCC-CEEECCCCccCCcCChHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 78999999988777654
Q ss_pred ---------------------------------------------------------------------ccCCCCCCEEE
Q 040849 511 ---------------------------------------------------------------------FGILKNLGVLD 521 (809)
Q Consensus 511 ---------------------------------------------------------------------~~~l~~L~~L~ 521 (809)
+..+++|++||
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~Ld 638 (768)
T 3rgz_A 559 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638 (768)
T ss_dssp GTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEE
T ss_pred hcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEE
Confidence 33457899999
Q ss_pred ccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccc
Q 040849 522 VSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEG 601 (809)
Q Consensus 522 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 601 (809)
|++|+++|.+|.+|++++.|+.|+|++|+++|.+|..|+++++|++||||+|+++|.+|..|.++++|++||+++|+++|
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 718 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEE
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCcccccCCCCCCCCccccCcccccc
Q 040849 602 EVPIKGVFSNSSAVSLDGNDNLCGGISELHLSTCSI 637 (809)
Q Consensus 602 ~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~~~~ 637 (809)
.||..++|.++...+|.||+++||.+ ++.|..
T Consensus 719 ~iP~~~~~~~~~~~~~~gN~~Lcg~~----l~~C~~ 750 (768)
T 3rgz_A 719 PIPEMGQFETFPPAKFLNNPGLCGYP----LPRCDP 750 (768)
T ss_dssp ECCSSSSGGGSCGGGGCSCTEEESTT----SCCCCS
T ss_pred cCCCchhhccCCHHHhcCCchhcCCC----CcCCCC
Confidence 99999999999999999999999965 347764
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.1e-65 Score=613.32 Aligned_cols=515 Identities=32% Similarity=0.503 Sum_probs=438.1
Q ss_pred CcEEEEECCCCCCccccCccc-cCCCCccEEeCCCCCCCccCCcc---c----------------------cccccCCcc
Q 040849 75 QRVTALLLPSLLLQGSLSPHI-GNLSFLRVLDLKNNSFRNEIPQE---I----------------------GYLFRLQFL 128 (809)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~l-~~l~~L~~LdLs~n~l~~~~p~~---~----------------------~~l~~L~~L 128 (809)
.+++.|+|+++.+.+.+|..+ +++++|++|||++|.+++..|.. + +.+++|++|
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L 205 (768)
T 3rgz_A 126 SGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFL 205 (768)
T ss_dssp TTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEE
T ss_pred CCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEE
Confidence 356677777777777666654 66666666666666666555544 3 456666667
Q ss_pred ccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCccc
Q 040849 129 WLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFV 208 (809)
Q Consensus 129 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 208 (809)
+|++|.+++.+|. ++++++|++|+|++|.+++.+|..++.+++|++|++++|++++.+|.. .+++|++|++++|+++
T Consensus 206 ~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~ 282 (768)
T 3rgz_A 206 DVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFT 282 (768)
T ss_dssp ECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEE
T ss_pred ECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccC
Confidence 7777777766666 777777777777777777777777777777777777777777766654 6777888888888888
Q ss_pred ccCcccccCC-CCccEEEeecCcCCCCcchhccCCCCCceeccCCcccccccChhhhcCCCCCcEEEccCccccccCCcc
Q 040849 209 GQIPKTLSQL-KRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPAS 287 (809)
Q Consensus 209 ~~~p~~l~~l-~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 287 (809)
+.+|..+..+ ++|++|++++|.+++.+|..+.++++|++|++++|.++|.+|......+++|++|++++|++++.+|..
T Consensus 283 ~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~ 362 (768)
T 3rgz_A 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPES 362 (768)
T ss_dssp ESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTT
T ss_pred CccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHH
Confidence 8888887765 889999999999988889899999999999999999988888874447899999999999998889988
Q ss_pred cccCC-CCceEecCCCcceeeCCC-CCC--CCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccch
Q 040849 288 ISNAS-HLMRLTIPINGFSGKVPS-FGN--LHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPE 363 (809)
Q Consensus 288 l~~l~-~L~~L~l~~n~l~~~~~~-~~~--l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~ 363 (809)
+..++ +|+.|++++|.+++.+|. +.. +++|+.|++++|.+++..+ ..+.++++|+.|+++.|.+.+.+|.
T Consensus 363 l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p------~~l~~l~~L~~L~Ls~N~l~~~~p~ 436 (768)
T 3rgz_A 363 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIP------PTLSNCSELVSLHLSFNYLSGTIPS 436 (768)
T ss_dssp HHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECC------GGGGGCTTCCEEECCSSEEESCCCG
T ss_pred HHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccC------HHHhcCCCCCEEECcCCcccCcccH
Confidence 88887 899999999999887776 554 7889999999998876544 4567889999999999999999999
Q ss_pred hhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCC
Q 040849 364 AVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTL 443 (809)
Q Consensus 364 ~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 443 (809)
.+..++. |+.|++++|++.+.+|..+..+++|++|++++|++++.+|..+.++++|++|++++|++++.+|.+++.+++
T Consensus 437 ~l~~l~~-L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 515 (768)
T 3rgz_A 437 SLGSLSK-LRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515 (768)
T ss_dssp GGGGCTT-CCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTT
T ss_pred HHhcCCC-CCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCC
Confidence 9988865 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhc-----------------------------------
Q 040849 444 LITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIG----------------------------------- 488 (809)
Q Consensus 444 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~----------------------------------- 488 (809)
|++|++++|++++.+|..+..+++|++||+++|+++|.+|..+..
T Consensus 516 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (768)
T 3rgz_A 516 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLE 595 (768)
T ss_dssp CCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEE
T ss_pred CCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999888876543
Q ss_pred -----------------------------------ccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCc
Q 040849 489 -----------------------------------LSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPN 533 (809)
Q Consensus 489 -----------------------------------l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 533 (809)
++.+ ++|||++|+++|.+|..++.++.|+.|||++|+++|.+|.
T Consensus 596 ~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L-~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~ 674 (768)
T 3rgz_A 596 FQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM-MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 674 (768)
T ss_dssp CTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCC-CEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCG
T ss_pred cccccchhhhccccccccccccceecccCchhhhccccc-cEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCCh
Confidence 3455 6899999999999999999999999999999999999999
Q ss_pred cccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCc-ccc
Q 040849 534 SLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNH-FEG 601 (809)
Q Consensus 534 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~-l~g 601 (809)
+|+++++|++|||++|+++|.+|..++++++|++||+|+|+++|.||.. ..+..+....+.+|+ +.|
T Consensus 675 ~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 675 EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCG 742 (768)
T ss_dssp GGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEES
T ss_pred HHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcC
Confidence 9999999999999999999999999999999999999999999999975 234445555667776 555
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.2e-60 Score=564.77 Aligned_cols=549 Identities=21% Similarity=0.186 Sum_probs=467.5
Q ss_pred CcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEc
Q 040849 75 QRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRL 154 (809)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 154 (809)
.+++.|+|+++.+++..+..|+++++|++|||++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 57999999999999988888999999999999999999999999999999999999999999766668999999999999
Q ss_pred ccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccCccccc--CCCCccEEEeecCcCC
Q 040849 155 GFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLS--QLKRMRFIGFGVNKLS 232 (809)
Q Consensus 155 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~--~l~~L~~L~L~~n~l~ 232 (809)
++|.+++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|++++..+..+. .+++|+.|++++|.++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999988888999999999999999999999999999999999999999999988877664 5689999999999999
Q ss_pred CCcchhccCCC---------------------------CCceeccCCcccccccChhhhcCC--CCCcEEEccCcccccc
Q 040849 233 GEIPFSIYNLS---------------------------SLNYFEFPVNQLQGSLPSDLGFTL--PNLERLNLGENQFTGP 283 (809)
Q Consensus 233 ~~~~~~l~~l~---------------------------~L~~L~l~~n~l~~~~p~~~~~~l--~~L~~L~Ls~N~l~~~ 283 (809)
+..|..+..++ +|+.|++++|.+++..|..+. .+ ++|+.|++++|++++.
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~-~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFL-GLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTG-GGGGSCCCEEECTTSCCCEE
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhh-ccCcCCCCEEECCCCCcCcc
Confidence 98888777654 456667777777766666554 34 3488888888888877
Q ss_pred CCcccccCCCCceEecCCCcceeeCCC-CCCCCCCcEEEeccccCCCCCCC-chhh--hhcccccCCccEEecccccccc
Q 040849 284 IPASISNASHLMRLTIPINGFSGKVPS-FGNLHKLQWVSISMNHLGNGEKD-DLEF--VNSLVNASRLELLGININNFGG 359 (809)
Q Consensus 284 ~p~~l~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~Ls~n~l~~~~~~-~~~~--~~~l~~~~~L~~L~l~~n~~~~ 359 (809)
.|..+..+++|+.|++++|.+++..|. +..+++|+.|+++.|...+.... .+.. ...+..+++|+.|+++.|.+.+
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 777888888888888888888877765 78888888888877655432110 0000 0145678899999999999998
Q ss_pred ccchhhhhccccCcEEEccCCcccc--cCCccccCC--CCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccC
Q 040849 360 MLPEAVGNLSTRLRILRVGNNQLFG--NIPSGLRNL--VNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIP 435 (809)
Q Consensus 360 ~~p~~~~~~~~~L~~L~Ls~n~l~~--~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 435 (809)
..|..+..++. |++|++++|.+.. ..+..+..+ ++|+.|++++|++++..|..|..+++|++|++++|++.+.+|
T Consensus 344 ~~~~~~~~l~~-L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 422 (680)
T 1ziw_A 344 IKSNMFTGLIN-LKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422 (680)
T ss_dssp CCTTTTTTCTT-CCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECC
T ss_pred CChhHhccccC-CcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccC
Confidence 88877777754 9999999997543 222334333 589999999999999999999999999999999999998766
Q ss_pred -cCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCc--cccCcchhcccCCceEEEccCCcCcccCCCCcc
Q 040849 436 -SSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLT--GTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFG 512 (809)
Q Consensus 436 -~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~ 512 (809)
..|.++++|++|++++|++.+..+..|..+++|+.|++++|.++ +.+|..+..+++| +.|++++|++++..+..|.
T Consensus 423 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L-~~L~Ls~N~l~~i~~~~~~ 501 (680)
T 1ziw_A 423 GQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL-TILDLSNNNIANINDDMLE 501 (680)
T ss_dssp SGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTC-CEEECCSSCCCCCCTTTTT
T ss_pred cccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCC-CEEECCCCCCCcCChhhhc
Confidence 67899999999999999999999999999999999999999987 5789999999999 7999999999988888899
Q ss_pred CCCCCCEEEccccccccccC--------ccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccc
Q 040849 513 ILKNLGVLDVSENKLSGEIP--------NSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFE 584 (809)
Q Consensus 513 ~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~ 584 (809)
.+++|++|+|++|++++..+ ..|.++++|++|+|++|+++...+..|.++++|+.|||++|++++..+..|.
T Consensus 502 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 581 (680)
T 1ziw_A 502 GLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFN 581 (680)
T ss_dssp TCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhC
Confidence 99999999999999986532 3478999999999999999966667899999999999999999988888899
Q ss_pred cCCCCCeEEccCCcccccCCCC-C-CCCCCCcccccCCCCCCCC
Q 040849 585 NFLFLQNLNLSFNHFEGEVPIK-G-VFSNSSAVSLDGNDNLCGG 626 (809)
Q Consensus 585 ~l~~L~~l~ls~N~l~g~~p~~-~-~~~~~~~~~~~~n~~lc~~ 626 (809)
++++|+.|++++|++++..|.. . .+.++..+++.+||+.|..
T Consensus 582 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 582 NQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp TCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred CCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 9999999999999999876642 1 4667888999999999964
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.1e-58 Score=545.62 Aligned_cols=523 Identities=22% Similarity=0.229 Sum_probs=466.1
Q ss_pred CcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEc
Q 040849 75 QRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRL 154 (809)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 154 (809)
.+++.|+|+++.+++..|..++++++|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 47889999999999999999999999999999999999777778999999999999999999888889999999999999
Q ss_pred ccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCC--CCCCCCEEEcccCcccccCcccccCC--------------
Q 040849 155 GFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFG--NLSSLEVLSASANQFVGQIPKTLSQL-------------- 218 (809)
Q Consensus 155 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~l~~l-------------- 218 (809)
++|.+++..|..++++++|++|++++|.+++..+..+. .+++|++|++++|++++..|..+..+
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~ 208 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLG 208 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCH
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccC
Confidence 99999999999999999999999999999987777654 56899999999999998888776654
Q ss_pred -------------CCccEEEeecCcCCCCcchhccCCCC--CceeccCCcccccccChhhhcCCCCCcEEEccCcccccc
Q 040849 219 -------------KRMRFIGFGVNKLSGEIPFSIYNLSS--LNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGP 283 (809)
Q Consensus 219 -------------~~L~~L~L~~n~l~~~~~~~l~~l~~--L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~ 283 (809)
++|+.|++++|.+++..|..+.+++. |+.|++++|++++..|..+. .+++|++|++++|.+++.
T Consensus 209 ~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 209 PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFA-WLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTT-TCTTCCEEECCSCCBSEE
T ss_pred hhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCccccc-CcccccEeeCCCCccCcc
Confidence 56788889999999988999988865 99999999999977777665 899999999999999999
Q ss_pred CCcccccCCCCceEecCCCcceee-----CC-----CCCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEecc
Q 040849 284 IPASISNASHLMRLTIPINGFSGK-----VP-----SFGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGIN 353 (809)
Q Consensus 284 ~p~~l~~l~~L~~L~l~~n~l~~~-----~~-----~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~ 353 (809)
.|..+..+++|+.|++++|...+. +| .|..+++|+.|++++|.+++..+ ..+..+++|+.++++
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~------~~~~~l~~L~~L~Ls 361 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKS------NMFTGLINLKYLSLS 361 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCT------TTTTTCTTCCEEECT
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCCh------hHhccccCCcEEECC
Confidence 999999999999999998765542 22 47889999999999999988654 345678899999999
Q ss_pred cccccccc-c-hhhhhcc-ccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCC-ccccCCCCCCEEEeeCCe
Q 040849 354 INNFGGML-P-EAVGNLS-TRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIP-GSIGDLHKLQRLGLQGNK 429 (809)
Q Consensus 354 ~n~~~~~~-p-~~~~~~~-~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~ 429 (809)
.|.+.... + ..+..+. +.|+.|++++|++++..|..+..+++|++|++++|.+++.+| ..+.++++|++|++++|+
T Consensus 362 ~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~ 441 (680)
T 1ziw_A 362 NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNK 441 (680)
T ss_dssp TCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCS
T ss_pred CCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCC
Confidence 99864332 2 2222221 469999999999999999999999999999999999998776 689999999999999999
Q ss_pred eecccCcCCcCCCCccEEEcccccCc--ccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccC
Q 040849 430 FLGEIPSSIGNLTLLITLSFDKNMLE--GSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTL 507 (809)
Q Consensus 430 l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~ 507 (809)
+.+..+..|..+++|+.|++++|.+. +..|..+.++++|++|++++|++++..|..+.++++| ++|++++|++++..
T Consensus 442 l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~~L~Ls~N~l~~~~ 520 (680)
T 1ziw_A 442 YLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKL-EILDLQHNNLARLW 520 (680)
T ss_dssp EEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCGGGG
T ss_pred cceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccccc-CEEeCCCCCccccc
Confidence 99999999999999999999999997 5789999999999999999999998777889999999 79999999998753
Q ss_pred C--------CCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCccccc
Q 040849 508 P--------SNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRI 579 (809)
Q Consensus 508 p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~ 579 (809)
+ ..|..+++|++|+|++|+++...+..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|++++.+
T Consensus 521 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~ 600 (680)
T 1ziw_A 521 KHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVE 600 (680)
T ss_dssp STTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCC
T ss_pred hhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccC
Confidence 2 34789999999999999999655567999999999999999999888888999999999999999999999
Q ss_pred ccccc-cCCCCCeEEccCCcccccCCC
Q 040849 580 PKYFE-NFLFLQNLNLSFNHFEGEVPI 605 (809)
Q Consensus 580 p~~~~-~l~~L~~l~ls~N~l~g~~p~ 605 (809)
|..|. .+++|+.+++++|++.+..+.
T Consensus 601 ~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 601 KKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp HHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred hhHhcccccccCEEEccCCCcccCCcc
Confidence 99888 899999999999999998874
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.2e-58 Score=540.51 Aligned_cols=494 Identities=20% Similarity=0.198 Sum_probs=346.2
Q ss_pred CccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcc
Q 040849 100 FLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVH 179 (809)
Q Consensus 100 ~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 179 (809)
.+++|||++|.+++..|..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 34555555555554444455555555555555555554445555555555555555555554444455555555555555
Q ss_pred cccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCc--eeccCCccccc
Q 040849 180 YNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLN--YFEFPVNQLQG 257 (809)
Q Consensus 180 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~--~L~l~~n~l~~ 257 (809)
+|++++..|..|+++++|++|++++|++++..++.+..+++|+.|++++|.+++..|..+..+++|+ .|++++|.+++
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCE
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCc
Confidence 5555544444455555555555555555443323333355555555555555544444455555554 44555555544
Q ss_pred ccChhhhcCCCCCcEEEccCcc---------------------cc-----ccCCcccccCC--CCceEecCCCcceeeCC
Q 040849 258 SLPSDLGFTLPNLERLNLGENQ---------------------FT-----GPIPASISNAS--HLMRLTIPINGFSGKVP 309 (809)
Q Consensus 258 ~~p~~~~~~l~~L~~L~Ls~N~---------------------l~-----~~~p~~l~~l~--~L~~L~l~~n~l~~~~~ 309 (809)
..|..+ ...+|+.|++++|. +. ...+..+..+. +|+.|++++|.+++..+
T Consensus 194 ~~~~~~--~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 194 IEPGAF--DSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp ECTTTT--TTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred cChhHh--hhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 333332 22344445444443 11 11122222222 67888888888887776
Q ss_pred C-CCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCc
Q 040849 310 S-FGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPS 388 (809)
Q Consensus 310 ~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~ 388 (809)
. |..+++|+.|++++|.++... ..+..+++|+.|++++|.+.+..|..+..++. |++|++++|.+.+.+|.
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~~lp-------~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~~~~~~~~ 343 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLSELP-------SGLVGLSTLKKLVLSANKFENLCQISASNFPS-LTHLSIKGNTKRLELGT 343 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCSCCC-------SSCCSCTTCCEEECTTCCCSBGGGGCGGGCTT-CSEEECCSCSSCCBCCS
T ss_pred HHhccccCCCEEeccCCccCCCC-------hhhcccccCCEEECccCCcCcCchhhhhccCc-CCEEECCCCCcccccch
Confidence 6 888888999999888887432 34567788888899888888887877777754 99999999988866655
Q ss_pred -cccCCCCCCeeeCCCccceecC--CccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCcc-ccC
Q 040849 389 -GLRNLVNLERLLLEGNQFTGRI--PGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSS-LGK 464 (809)
Q Consensus 389 -~l~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~ 464 (809)
.+..+++|++|++++|.+++.. +..+..+++|++|++++|++.+..|..|..+++|++|++++|++++..|.. +..
T Consensus 344 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 423 (606)
T 3t6q_A 344 GCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQN 423 (606)
T ss_dssp STTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTT
T ss_pred hhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhC
Confidence 4888999999999999988766 778888999999999999998888888888999999999999988776544 888
Q ss_pred CCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCccc---CCCCccCCCCCCEEEccccccccccCccccCCCCC
Q 040849 465 CQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGT---LPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRL 541 (809)
Q Consensus 465 l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 541 (809)
+++|++|++++|++++..|..+.++++| ++|++++|++++. .+..+..+++|++|+|++|++++..|..|.++++|
T Consensus 424 l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 502 (606)
T 3t6q_A 424 LHLLKVLNLSHSLLDISSEQLFDGLPAL-QHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMM 502 (606)
T ss_dssp CTTCCEEECTTCCCBTTCTTTTTTCTTC-CEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cccCCEEECCCCccCCcCHHHHhCCCCC-CEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCC
Confidence 8999999999999988888888888888 7899999998863 33568888999999999999998888899999999
Q ss_pred CEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCC
Q 040849 542 EQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPI 605 (809)
Q Consensus 542 ~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 605 (809)
++|+|++|++++.+|..|.+++.| .||+++|++++.+|..|..+++|+++++++|++.+.++.
T Consensus 503 ~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 503 NHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp CEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred CEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 999999999999999999999999 999999999988888888899999999999999887663
No 6
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=4.4e-60 Score=552.10 Aligned_cols=495 Identities=20% Similarity=0.276 Sum_probs=368.6
Q ss_pred CCHHHHHHHHHHHHhcCCCCcc-------ccCCCCCCCCCCcc---cccccCCCCCcEEEEECCCCCCccccCccccCCC
Q 040849 30 SNETDQLALLEFKAKVTHDPLE-------VLSSWNYSRHFCQW---KGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLS 99 (809)
Q Consensus 30 ~~~~~~~~ll~~k~~~~~~~~~-------~l~~W~~~~~~c~w---~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~ 99 (809)
....|++||.+||+++..+.+. ...+|+.+.+||.| .||+|+.. +||++|+|++++++|.+|+++++|+
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCT
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCc
Confidence 3457999999999998644332 24489988999999 99999865 8999999999999999999999999
Q ss_pred CccEEeCCCCCC------Cc------cCCccccccccCCccccCCCcCcccCCccccC-CCcCcEEEcccCCCCCCCccc
Q 040849 100 FLRVLDLKNNSF------RN------EIPQEIGYLFRLQFLWLDNNTFGGQIPDNISH-CVNLESLRLGFNELVGKVPRK 166 (809)
Q Consensus 100 ~L~~LdLs~n~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~ 166 (809)
+|++|||++|.+ .+ .+|... +.+|+ +++++|.+.+.+|..+.. +..+..+++....+..
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 177 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK----- 177 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC-----
T ss_pred cceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc-----
Confidence 999999999976 33 455544 66777 999999999888877763 2334444444322221
Q ss_pred ccCCCCCCEEEcc--cccCcccCCccCCCCCCCCEEEcccCccccc-----------------Cccccc--CCCCccEEE
Q 040849 167 LGSLSKLRTLAVH--YNNLSGQIPSSFGNLSSLEVLSASANQFVGQ-----------------IPKTLS--QLKRMRFIG 225 (809)
Q Consensus 167 l~~l~~L~~L~Ls--~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~l~--~l~~L~~L~ 225 (809)
.....++.+.+. +|++++ +|..|+++++|++|+|++|++++. +|..++ ++++|++|+
T Consensus 178 -~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~ 255 (636)
T 4eco_A 178 -SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVE 255 (636)
T ss_dssp -CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred -ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEE
Confidence 111222322332 466776 677777777777777777777764 777777 788888888
Q ss_pred eecCcCCCCcchhccCCCCCceeccCCcc-ccc-ccChhhhcCC------CCCcEEEccCccccccCCc--ccccCCCCc
Q 040849 226 FGVNKLSGEIPFSIYNLSSLNYFEFPVNQ-LQG-SLPSDLGFTL------PNLERLNLGENQFTGPIPA--SISNASHLM 295 (809)
Q Consensus 226 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~-l~~-~~p~~~~~~l------~~L~~L~Ls~N~l~~~~p~--~l~~l~~L~ 295 (809)
+++|.+.+.+|..+.++++|++|++++|+ ++| .+|..++ .+ ++|++|++++|+++ .+|. .+..+++|+
T Consensus 256 L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~-~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~ 333 (636)
T 4eco_A 256 VYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQ-ALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLG 333 (636)
T ss_dssp EECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHH-HHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCC
T ss_pred ecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHH-hhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCC
Confidence 88888877888778888888888888887 777 7777765 33 78899999999888 7887 888888888
Q ss_pred eEecCCCcceeeCCCCCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEE
Q 040849 296 RLTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRIL 375 (809)
Q Consensus 296 ~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L 375 (809)
.|++++|.++|.+|.+..+++ |++|
T Consensus 334 ~L~L~~N~l~g~ip~~~~l~~-------------------------------------------------------L~~L 358 (636)
T 4eco_A 334 MLECLYNQLEGKLPAFGSEIK-------------------------------------------------------LASL 358 (636)
T ss_dssp EEECCSCCCEEECCCCEEEEE-------------------------------------------------------ESEE
T ss_pred EEeCcCCcCccchhhhCCCCC-------------------------------------------------------CCEE
Confidence 888888888876664433333 4555
Q ss_pred EccCCcccccCCccccCCCC-CCeeeCCCccceecCCccccCCC--CCCEEEeeCCeeecccCcCCc-------CCCCcc
Q 040849 376 RVGNNQLFGNIPSGLRNLVN-LERLLLEGNQFTGRIPGSIGDLH--KLQRLGLQGNKFLGEIPSSIG-------NLTLLI 445 (809)
Q Consensus 376 ~Ls~n~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~-------~l~~L~ 445 (809)
++++|+++ .+|..+..+++ |++|++++|.++ .+|..+..++ +|++|++++|++++..|..+. .+++|+
T Consensus 359 ~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~ 436 (636)
T 4eco_A 359 NLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVS 436 (636)
T ss_dssp ECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEE
T ss_pred ECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCC
Confidence 55555555 45556666666 777777777776 5666665544 677777777777777777776 667777
Q ss_pred EEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhccc--------CCceEEEccCCcCcccCCCCcc--CCC
Q 040849 446 TLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLS--------SLSIYLDLSQNQLNGTLPSNFG--ILK 515 (809)
Q Consensus 446 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--------~l~~~L~Ls~N~l~~~~p~~~~--~l~ 515 (809)
+|++++|++++..+..+..+++|++|+|++|+++ .+|....... +| +.|+|++|+++ .+|..+. .++
T Consensus 437 ~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L-~~L~Ls~N~l~-~lp~~~~~~~l~ 513 (636)
T 4eco_A 437 SINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLL-TSIDLRFNKLT-KLSDDFRATTLP 513 (636)
T ss_dssp EEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGC-CEEECCSSCCC-BCCGGGSTTTCT
T ss_pred EEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCc-cEEECcCCcCC-ccChhhhhccCC
Confidence 8888888777444444556778888888888887 5665444322 66 67888888888 5676665 888
Q ss_pred CCCEEEccccccccccCccccCCCCCCEEeC------cCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCC
Q 040849 516 NLGVLDVSENKLSGEIPNSLGSCVRLEQLGM------NGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFL 589 (809)
Q Consensus 516 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L 589 (809)
+|+.|+|++|++++ +|..+.++++|+.|+| ++|++.+.+|..+.++++|+.|||++|++ +.+|..+. ++|
T Consensus 514 ~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L 589 (636)
T 4eco_A 514 YLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNI 589 (636)
T ss_dssp TCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTC
T ss_pred CcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcC
Confidence 88888888888886 7888888888888888 56888899999999999999999999999 67887766 789
Q ss_pred CeEEccCCcccc
Q 040849 590 QNLNLSFNHFEG 601 (809)
Q Consensus 590 ~~l~ls~N~l~g 601 (809)
+.|++++|++..
T Consensus 590 ~~L~Ls~N~l~~ 601 (636)
T 4eco_A 590 SVLDIKDNPNIS 601 (636)
T ss_dssp CEEECCSCTTCE
T ss_pred CEEECcCCCCcc
Confidence 999999998874
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.4e-57 Score=529.41 Aligned_cols=513 Identities=21% Similarity=0.182 Sum_probs=407.9
Q ss_pred CcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEc
Q 040849 75 QRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRL 154 (809)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 154 (809)
.+++.|+|+++.+++..+..|+++++|++|||++|.+++..|.+|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 46777788887777777777777888888888888777777777777888888888888777777777777888888888
Q ss_pred ccCCCCCCCcccccCCCCCCEEEcccccCcc-cCCccCCCCCCCCEEEcccCcccccCcccccCCCCcc----EEEeecC
Q 040849 155 GFNELVGKVPRKLGSLSKLRTLAVHYNNLSG-QIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMR----FIGFGVN 229 (809)
Q Consensus 155 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~----~L~L~~n 229 (809)
++|.+++..+..++++++|++|++++|++++ .+|..|+++++|++|++++|++++..|..|+.+++|+ .|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 8887777666777777888888888887765 4577777788888888888877777776666665544 6777777
Q ss_pred cCCCCcchhccCCCCCceeccCCcccccc-cChhhhcCCCCCcEEEccCcccccc------CCcccccCC--CCceEec-
Q 040849 230 KLSGEIPFSIYNLSSLNYFEFPVNQLQGS-LPSDLGFTLPNLERLNLGENQFTGP------IPASISNAS--HLMRLTI- 299 (809)
Q Consensus 230 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~-~p~~~~~~l~~L~~L~Ls~N~l~~~------~p~~l~~l~--~L~~L~l- 299 (809)
.+++..+..+... +|+.|++++|.+.+. +|..+. .+++|+.+++..+.+.+. .+..+..+. .++.+++
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~-~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 269 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQ-NLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLT 269 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHH-TTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEEC
T ss_pred CcceeCcccccCc-eeeeeeccCCccchhHHHHHhc-cccccccccccccccccCCcccccChHHhhhhhhccHhheecc
Confidence 7776555555444 777788877777643 333333 677777777755443321 111222222 3455666
Q ss_pred CCCcceeeCCCCCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccC
Q 040849 300 PINGFSGKVPSFGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGN 379 (809)
Q Consensus 300 ~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~ 379 (809)
..|.+.+..|.+..+++|+.|++++|.+.... .+..+++|+.|++++|.+ +.+|.. .+ ++|+.|++++
T Consensus 270 ~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~--------~l~~~~~L~~L~l~~n~l-~~lp~~--~l-~~L~~L~l~~ 337 (606)
T 3vq2_A 270 YTNDFSDDIVKFHCLANVSAMSLAGVSIKYLE--------DVPKHFKWQSLSIIRCQL-KQFPTL--DL-PFLKSLTLTM 337 (606)
T ss_dssp CCTTCCGGGGSCGGGTTCSEEEEESCCCCCCC--------CCCTTCCCSEEEEESCCC-SSCCCC--CC-SSCCEEEEES
T ss_pred ccccccccccccccCCCCCEEEecCccchhhh--------hccccccCCEEEcccccC-cccccC--CC-CccceeeccC
Confidence 67788888888889999999999999986542 456778899999999999 778843 44 4599999999
Q ss_pred CcccccCCccccCCCCCCeeeCCCccceec--CCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCccc
Q 040849 380 NQLFGNIPSGLRNLVNLERLLLEGNQFTGR--IPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGS 457 (809)
Q Consensus 380 n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 457 (809)
|+..+.. .+..+++|++|++++|.+++. .|..+..+++|++|++++|.+.+ +|..+..+++|+.|++++|++.+.
T Consensus 338 n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~ 414 (606)
T 3vq2_A 338 NKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRV 414 (606)
T ss_dssp CSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEEST
T ss_pred CcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCc
Confidence 9766544 577899999999999999876 37888999999999999999885 568889999999999999999988
Q ss_pred CC-ccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcc-cCCCCccCCCCCCEEEccccccccccCccc
Q 040849 458 IP-SSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNG-TLPSNFGILKNLGVLDVSENKLSGEIPNSL 535 (809)
Q Consensus 458 ~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 535 (809)
.| ..+..+++|++|++++|++++..|..+.++++| +.|++++|++++ .+|..+..+++|++|+|++|++++..|..|
T Consensus 415 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 493 (606)
T 3vq2_A 415 TEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSL-NTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVF 493 (606)
T ss_dssp TTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC-CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cChhhhhccccCCEEECcCCCCCccchhhhcCCCCC-CEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhh
Confidence 77 688999999999999999998889999999999 799999999998 478889999999999999999999999999
Q ss_pred cCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCC-CCCeEEccCCcccccCCCC
Q 040849 536 GSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFL-FLQNLNLSFNHFEGEVPIK 606 (809)
Q Consensus 536 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~-~L~~l~ls~N~l~g~~p~~ 606 (809)
.++++|++|+|++|++++.+|..|.++++|+.||+++|+++ .+|..+..++ +|++|++++|++.+..+..
T Consensus 494 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 494 DTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp TTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred cccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 99999999999999999999999999999999999999999 5666688887 5999999999999877753
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.9e-57 Score=525.54 Aligned_cols=496 Identities=21% Similarity=0.150 Sum_probs=444.4
Q ss_pred CcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEc
Q 040849 75 QRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRL 154 (809)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 154 (809)
..++.|+++++.+++..|..|+++++|++|||++|.+++..|.+|+++++|++|+|++|.+++..|..|+++++|++|++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 46899999999999988999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCcc--EEEeecCcCC
Q 040849 155 GFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMR--FIGFGVNKLS 232 (809)
Q Consensus 155 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~--~L~L~~n~l~ 232 (809)
++|.+++..|..++++++|++|++++|++++..+..+..+++|++|++++|++++..|..|+.+++|+ .|++++|.++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 99999988788999999999999999999975545555699999999999999999899999999999 8999999999
Q ss_pred CCcchhccCCCCCceeccCCccccc-------------------------ccChhhhcCC--CCCcEEEccCccccccCC
Q 040849 233 GEIPFSIYNLSSLNYFEFPVNQLQG-------------------------SLPSDLGFTL--PNLERLNLGENQFTGPIP 285 (809)
Q Consensus 233 ~~~~~~l~~l~~L~~L~l~~n~l~~-------------------------~~p~~~~~~l--~~L~~L~Ls~N~l~~~~p 285 (809)
+..|..+.. .+|+.|++++|.... .++...+..+ .+|+.|++++|.+++..+
T Consensus 193 ~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 193 GIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp EECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred ccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 887776654 678888888775110 1111111112 278999999999999888
Q ss_pred cccccCCCCceEecCCCcceeeCCCCCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchh-
Q 040849 286 ASISNASHLMRLTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEA- 364 (809)
Q Consensus 286 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~- 364 (809)
..+..+++|+.|++++|.++...+.+..+++|++|++++|.+++..+ ..+..+++|+.|++++|.+.+.+|..
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~------~~~~~l~~L~~L~l~~n~~~~~~~~~~ 345 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQ------ISASNFPSLTHLSIKGNTKRLELGTGC 345 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGG------GCGGGCTTCSEEECCSCSSCCBCCSST
T ss_pred HHhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCch------hhhhccCcCCEEECCCCCcccccchhh
Confidence 88999999999999999999544459999999999999999986543 35667899999999999999888765
Q ss_pred hhhccccCcEEEccCCcccccC--CccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcC-CcCC
Q 040849 365 VGNLSTRLRILRVGNNQLFGNI--PSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSS-IGNL 441 (809)
Q Consensus 365 ~~~~~~~L~~L~Ls~n~l~~~~--p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l 441 (809)
+..+ ++|++|++++|++.+.. |..+..+++|++|++++|.+++..|..+..+++|++|++++|++.+..|.. +..+
T Consensus 346 ~~~l-~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 424 (606)
T 3t6q_A 346 LENL-ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNL 424 (606)
T ss_dssp TTTC-TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTC
T ss_pred hhcc-CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCc
Confidence 4554 56999999999999876 788999999999999999999999999999999999999999999887654 8999
Q ss_pred CCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccc---cCcchhcccCCceEEEccCCcCcccCCCCccCCCCCC
Q 040849 442 TLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGT---IPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLG 518 (809)
Q Consensus 442 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~ 518 (809)
++|++|++++|.+++..|..+..+++|++|++++|++++. .+..+..+++| +.|++++|++++..|..|..+++|+
T Consensus 425 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~ 503 (606)
T 3t6q_A 425 HLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRL-EILVLSFCDLSSIDQHAFTSLKMMN 503 (606)
T ss_dssp TTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTC-CEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCc-cEEECCCCccCccChhhhccccCCC
Confidence 9999999999999999999999999999999999999873 33678889999 8999999999999999999999999
Q ss_pred EEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccc
Q 040849 519 VLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIP 580 (809)
Q Consensus 519 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p 580 (809)
+|||++|++++..|..+.+++.| +|++++|++++.+|..|..+++|+.|++++|++++..+
T Consensus 504 ~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 504 HVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp EEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred EEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999999999999999999999 99999999999999999999999999999999998665
No 9
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.1e-57 Score=539.34 Aligned_cols=496 Identities=18% Similarity=0.227 Sum_probs=290.4
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCccccCCCCCCC-----CC--Ccc------------cccccCCCCCcEEEEECCCCCCc
Q 040849 28 HKSNETDQLALLEFKAKVTHDPLEVLSSWNYSR-----HF--CQW------------KGVTCSPRHQRVTALLLPSLLLQ 88 (809)
Q Consensus 28 ~~~~~~~~~~ll~~k~~~~~~~~~~l~~W~~~~-----~~--c~w------------~gv~c~~~~~~v~~l~l~~~~l~ 88 (809)
+.+..+|++||++||+++. +| +|+.+. +| |.| .||+|+. .+||++|+|++++++
T Consensus 264 ~~~~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAK 336 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCE
T ss_pred cccchHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCC
Confidence 3456789999999999995 54 686543 56 999 9999986 589999999999999
Q ss_pred cccCccccCCCCccEEeC-CCCCCCccCCccccc----------------------------------------------
Q 040849 89 GSLSPHIGNLSFLRVLDL-KNNSFRNEIPQEIGY---------------------------------------------- 121 (809)
Q Consensus 89 g~~~~~l~~l~~L~~LdL-s~n~l~~~~p~~~~~---------------------------------------------- 121 (809)
|.+|++|++|++|++||| ++|.++|..|-.-..
T Consensus 337 G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 337 GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 999999999999999999 899888774432111
Q ss_pred -----cccCCccccCC--CcCcccCCccccCCCcCcEEEcccCCCCCC-CcccccCCCCCCEEEcccccCcccCCccCC-
Q 040849 122 -----LFRLQFLWLDN--NTFGGQIPDNISHCVNLESLRLGFNELVGK-VPRKLGSLSKLRTLAVHYNNLSGQIPSSFG- 192 (809)
Q Consensus 122 -----l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~- 192 (809)
...++.+.+.. |.+++ +|..|+++++|++|+|++|.+++. +|..+.. ++.|.+++.+|..++
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~--------~s~n~~~g~iP~~l~f 487 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWED--------ANSDYAKQYENEELSW 487 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC--------TTSHHHHHHTTSCCCG
T ss_pred cccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccc--------cccccccccCChhhhh
Confidence 11222222222 44444 444455555555555555555441 0000000 000111113555555
Q ss_pred -CCCCCCEEEcccCcccccCcccccCCCCccEEEeecCc-CCC-CcchhccCCC-------CCceeccCCcccccccCh-
Q 040849 193 -NLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNK-LSG-EIPFSIYNLS-------SLNYFEFPVNQLQGSLPS- 261 (809)
Q Consensus 193 -~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~~~~l~~l~-------~L~~L~l~~n~l~~~~p~- 261 (809)
++++|++|+|++|.+.+.+|..|+++++|+.|++++|+ +++ .+|..+.+++ +|++|++++|+++ .+|.
T Consensus 488 ~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~ 566 (876)
T 4ecn_A 488 SNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPAS 566 (876)
T ss_dssp GGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCH
T ss_pred ccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCCh
Confidence 66666666666666666666666666666666666665 555 5555554444 6666666666666 6665
Q ss_pred -hhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCC-CCCCCC-CcEEEeccccCCCCCCCchhhh
Q 040849 262 -DLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPS-FGNLHK-LQWVSISMNHLGNGEKDDLEFV 338 (809)
Q Consensus 262 -~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~-~~~l~~-L~~L~Ls~n~l~~~~~~~~~~~ 338 (809)
.+. .+++|+.|+|++|+++ .+| .+..+++|+.|++++|.++ .+|. +..+++ |+.|++++|.++... .
T Consensus 567 ~~l~-~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp-~----- 636 (876)
T 4ecn_A 567 ASLQ-KMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIP-N----- 636 (876)
T ss_dssp HHHT-TCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCC-S-----
T ss_pred hhhh-cCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcCc-h-----
Confidence 444 5666666666666666 555 6666666666677666666 4443 666666 777777766665221 1
Q ss_pred hcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCcc---cc--CCCCCCeeeCCCccceecCCcc
Q 040849 339 NSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSG---LR--NLVNLERLLLEGNQFTGRIPGS 413 (809)
Q Consensus 339 ~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~---l~--~l~~L~~L~Ls~N~l~~~~p~~ 413 (809)
.+..++. ++|+.|++++|++.+.+|.. +. .+++|+.|+|++|.++ .+|..
T Consensus 637 -~~~~~~~-----------------------~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~ 691 (876)
T 4ecn_A 637 -IFNAKSV-----------------------YVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTE 691 (876)
T ss_dssp -CCCTTCS-----------------------SCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHH
T ss_pred -hhhcccc-----------------------CCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHH
Confidence 1111110 11444444444444433321 11 2235566666666665 33332
Q ss_pred -ccCCCCCCEEEeeCCeeecccCcCCcC--------CCCccEEEcccccCcccCCcccc--CCCCCcEEeCcCCcCcccc
Q 040849 414 -IGDLHKLQRLGLQGNKFLGEIPSSIGN--------LTLLITLSFDKNMLEGSIPSSLG--KCQNLILLGLSNNNLTGTI 482 (809)
Q Consensus 414 -~~~l~~L~~L~Ls~N~l~~~~p~~~~~--------l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~Ls~N~l~~~~ 482 (809)
+..+++|+.|+|++|+++ .+|..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +
T Consensus 692 ~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-l 768 (876)
T 4ecn_A 692 LFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-F 768 (876)
T ss_dssp HHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-C
T ss_pred HHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-c
Confidence 335566666666666665 33332221 225555555555555 4444444 55555555555555554 4
Q ss_pred CcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCC
Q 040849 483 PTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSL 562 (809)
Q Consensus 483 p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 562 (809)
|..+..+++| +.|+|++|+ ++++|++.+.+|..|.++++|+.|+|++|++ +.+|..+.
T Consensus 769 p~~l~~L~~L-~~L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~-- 826 (876)
T 4ecn_A 769 PTQPLNSSQL-KAFGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT-- 826 (876)
T ss_dssp CCGGGGCTTC-CEEECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--
T ss_pred chhhhcCCCC-CEEECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--
Confidence 5555555555 455555544 3455777777777777777777777777777 56666654
Q ss_pred CCCCEEeCCCCCcccccccccccCCCCCeEEccCCccc
Q 040849 563 RGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFE 600 (809)
Q Consensus 563 ~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 600 (809)
++|+.|||++|++....+..+.....+..+.+.+|++.
T Consensus 827 ~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 827 PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 47777777777777666666655555556666666543
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-56 Score=539.61 Aligned_cols=519 Identities=21% Similarity=0.233 Sum_probs=363.4
Q ss_pred CcccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccC-CccccccccCCccccCCCcCcccCCc
Q 040849 63 CQWKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEI-PQEIGYLFRLQFLWLDNNTFGGQIPD 141 (809)
Q Consensus 63 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~ 141 (809)
|.|..|.+ ...+++.|+|+++.+++..+..|.++++|++|||++|.+.+.+ |.+|+++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 56777776 3357888888888888877888888888888888888655555 77788888888888888888887788
Q ss_pred cccCCCcCcEEEcccCCCCCCCccc--ccCCCCCCEEEcccccCcccCC-ccCCCCCCCCEEEcccCcccccCcccccCC
Q 040849 142 NISHCVNLESLRLGFNELVGKVPRK--LGSLSKLRTLAVHYNNLSGQIP-SSFGNLSSLEVLSASANQFVGQIPKTLSQL 218 (809)
Q Consensus 142 ~~~~l~~L~~L~Ls~N~l~~~~p~~--l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 218 (809)
.|.++++|++|+|++|.+++..|.. |.++++|++|+|++|.+++..+ ..|+++++|++|++++|.+++..|..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 8888888888888888888765554 7888888888888888876654 467888888888888888888777777776
Q ss_pred --CCccEEEeecCcCCCCcchhccCCCC------CceeccCCcccccccChhhhcC--CCCCcEEEccCc---------c
Q 040849 219 --KRMRFIGFGVNKLSGEIPFSIYNLSS------LNYFEFPVNQLQGSLPSDLGFT--LPNLERLNLGEN---------Q 279 (809)
Q Consensus 219 --~~L~~L~L~~n~l~~~~~~~l~~l~~------L~~L~l~~n~l~~~~p~~~~~~--l~~L~~L~Ls~N---------~ 279 (809)
++|+.|+++.|.+.+..|..+..+.+ |+.|++++|.+++.+|..+... .++++.+.++.+ .
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 78888888888888877777666655 8888888888877777665532 245677776632 2
Q ss_pred ccccCCcccccC--CCCceEecCCCcceeeCCC-CCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccc
Q 040849 280 FTGPIPASISNA--SHLMRLTIPINGFSGKVPS-FGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININN 356 (809)
Q Consensus 280 l~~~~p~~l~~l--~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~ 356 (809)
+.+..+..+..+ ++|+.|++++|.+.+..+. |..+++|+.|++++|.+++..+. .+..+++|+.|+++.|.
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~------~~~~l~~L~~L~Ls~N~ 325 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADE------AFYGLDNLQVLNLSYNL 325 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTT------TTTTCSSCCEEEEESCC
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChH------HhcCCCCCCEEECCCCC
Confidence 333333444443 5677777777777776665 77777777777777777655432 34456677777777777
Q ss_pred cccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCc
Q 040849 357 FGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPS 436 (809)
Q Consensus 357 ~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 436 (809)
+.+..|..+..++. |+.|++++|++.+..+..|..+++|++|+|++|.+++. ..+++|+.|++++|+++ .+|.
T Consensus 326 l~~~~~~~~~~l~~-L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~ 398 (844)
T 3j0a_A 326 LGELYSSNFYGLPK-VAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPK 398 (844)
T ss_dssp CSCCCSCSCSSCTT-CCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCC
T ss_pred CCccCHHHhcCCCC-CCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-cccc
Confidence 76666666666543 77777777777766666677777777777777777632 22667777777777776 3333
Q ss_pred CCcCCCCccEEEcccccCcccCC-ccccCCCCCcEEeCcCCcCccccCc-chhcccCCceEEEccCCcCc-----ccCCC
Q 040849 437 SIGNLTLLITLSFDKNMLEGSIP-SSLGKCQNLILLGLSNNNLTGTIPT-EVIGLSSLSIYLDLSQNQLN-----GTLPS 509 (809)
Q Consensus 437 ~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~l~~~L~Ls~N~l~-----~~~p~ 509 (809)
. ..+++.|++++|++++... ..+.++++|+.|+|++|++++..+. .+..+++| +.|++++|.++ +..+.
T Consensus 399 ~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L-~~L~Ls~N~l~~~~~~~~~~~ 474 (844)
T 3j0a_A 399 I---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSL-EQLFLGENMLQLAWETELCWD 474 (844)
T ss_dssp C---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTC-CBCEEESCCCSSSCCSCCCSS
T ss_pred c---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCcc-ccccCCCCccccccccccchh
Confidence 2 3456777777777765322 2244667777777777777654332 23345556 56777777775 33445
Q ss_pred CccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCC
Q 040849 510 NFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFL 589 (809)
Q Consensus 510 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L 589 (809)
.|..+++|+.|||++|++++..|..|.++++|+.|+|++|++++..|..+. ++|+.|||++|++++.+|..|. +|
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L 549 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SL 549 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SC
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---Cc
Confidence 566777777777777777777777777777777777777777766666555 6777777777777777776553 56
Q ss_pred CeEEccCCcccccCCC
Q 040849 590 QNLNLSFNHFEGEVPI 605 (809)
Q Consensus 590 ~~l~ls~N~l~g~~p~ 605 (809)
+.+++++|++.+.++.
T Consensus 550 ~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 550 SVLDITHNKFICECEL 565 (844)
T ss_dssp CEEEEEEECCCCSSSC
T ss_pred CEEEecCCCccccccc
Confidence 7777777777766653
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.2e-55 Score=515.10 Aligned_cols=524 Identities=18% Similarity=0.163 Sum_probs=450.0
Q ss_pred EECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCC
Q 040849 80 LLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNEL 159 (809)
Q Consensus 80 l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 159 (809)
++.++.+++ .+|..+. ++|++|||++|.+++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+
T Consensus 16 ~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l 92 (606)
T 3vq2_A 16 YQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92 (606)
T ss_dssp EECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred eEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcc
Confidence 445555555 3555554 7899999999999999999999999999999999999999899999999999999999999
Q ss_pred CCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccc-cCcccccCCCCccEEEeecCcCCCCcchh
Q 040849 160 VGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVG-QIPKTLSQLKRMRFIGFGVNKLSGEIPFS 238 (809)
Q Consensus 160 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~~~ 238 (809)
++..|..|+++++|++|+|++|++++..+..|+++++|++|++++|++++ .+|..|+++++|++|++++|++++..+..
T Consensus 93 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~ 172 (606)
T 3vq2_A 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVND 172 (606)
T ss_dssp CCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTT
T ss_pred cccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhh
Confidence 99889999999999999999999998888899999999999999999986 57999999999999999999999988888
Q ss_pred ccCCCCCc----eeccCCcccccccChhhhcCCCCCcEEEccCcccc-ccCCcccccCCCCceEecCCCcceeeC--C--
Q 040849 239 IYNLSSLN----YFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFT-GPIPASISNASHLMRLTIPINGFSGKV--P-- 309 (809)
Q Consensus 239 l~~l~~L~----~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~l~~n~l~~~~--~-- 309 (809)
+..+++|+ +|+++.|.+++ +|...+ ...+|+.|++++|.++ +..|..+.+++.++.+++..+.+.+.. +
T Consensus 173 ~~~l~~L~~~l~~L~l~~n~l~~-~~~~~~-~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~ 250 (606)
T 3vq2_A 173 LQFLRENPQVNLSLDMSLNPIDF-IQDQAF-QGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIF 250 (606)
T ss_dssp THHHHHCTTCCCEEECTTCCCCE-ECTTTT-TTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred hhhhhccccccceeeccCCCcce-eCcccc-cCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCccccc
Confidence 88877765 79999999984 555554 3458999999999987 467888999999999888655543211 1
Q ss_pred --C-CCCCC--CCcEEEe-ccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCccc
Q 040849 310 --S-FGNLH--KLQWVSI-SMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLF 383 (809)
Q Consensus 310 --~-~~~l~--~L~~L~L-s~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~ 383 (809)
. +..+. .++.+++ ..|.+.+..+ .+..+++|+.+++++|.+.. +| .+..+. +|+.|++++|++
T Consensus 251 ~~~~~~~l~~l~l~~l~l~~~~~~~~~~~-------~~~~l~~L~~L~l~~~~~~~-l~-~l~~~~-~L~~L~l~~n~l- 319 (606)
T 3vq2_A 251 EPSIMEGLCDVTIDEFRLTYTNDFSDDIV-------KFHCLANVSAMSLAGVSIKY-LE-DVPKHF-KWQSLSIIRCQL- 319 (606)
T ss_dssp CGGGGTTGGGSEEEEEEECCCTTCCGGGG-------SCGGGTTCSEEEEESCCCCC-CC-CCCTTC-CCSEEEEESCCC-
T ss_pred ChHHhhhhhhccHhheecccccccccccc-------ccccCCCCCEEEecCccchh-hh-hccccc-cCCEEEcccccC-
Confidence 1 22232 3445555 4555554322 26778899999999999854 55 555554 599999999999
Q ss_pred ccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecc--cCcCCcCCCCccEEEcccccCcccCCcc
Q 040849 384 GNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGE--IPSSIGNLTLLITLSFDKNMLEGSIPSS 461 (809)
Q Consensus 384 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 461 (809)
+.+| .+ .+++|++|++++|...+.. .+..+++|++|++++|++++. .|..+..+++|++|++++|.+++ +|..
T Consensus 320 ~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~ 394 (606)
T 3vq2_A 320 KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSAN 394 (606)
T ss_dssp SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCC
T ss_pred cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhh
Confidence 6778 45 9999999999999766544 677999999999999999977 48889999999999999999985 5688
Q ss_pred ccCCCCCcEEeCcCCcCccccC-cchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEcccccccc-ccCccccCCC
Q 040849 462 LGKCQNLILLGLSNNNLTGTIP-TEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSG-EIPNSLGSCV 539 (809)
Q Consensus 462 l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~ 539 (809)
+..+++|+.|++++|++++..| ..+..+++| +.|++++|++++..|..+..+++|++|++++|++++ .+|..|+.++
T Consensus 395 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 473 (606)
T 3vq2_A 395 FMGLEELQHLDFQHSTLKRVTEFSAFLSLEKL-LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTT 473 (606)
T ss_dssp CTTCTTCCEEECTTSEEESTTTTTTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCT
T ss_pred ccCCCCCCeeECCCCccCCccChhhhhccccC-CEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCC
Confidence 9999999999999999998877 688899999 899999999999999999999999999999999998 4899999999
Q ss_pred CCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCCC-CCCC-CCCcccc
Q 040849 540 RLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIK-GVFS-NSSAVSL 617 (809)
Q Consensus 540 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~-~~~~~~~ 617 (809)
+|++|+|++|++++.+|..|.++++|+.|++++|++++.+|..|.++++|++|++++|+++ .+|.. ..+. ++..+++
T Consensus 474 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l 552 (606)
T 3vq2_A 474 NLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNL 552 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEEC
T ss_pred CCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEc
Confidence 9999999999999999999999999999999999999999999999999999999999999 45543 2333 4778899
Q ss_pred cCCCCCCCC
Q 040849 618 DGNDNLCGG 626 (809)
Q Consensus 618 ~~n~~lc~~ 626 (809)
.+|+..|..
T Consensus 553 ~~N~~~c~c 561 (606)
T 3vq2_A 553 TNNSVACIC 561 (606)
T ss_dssp CSCCCCCSS
T ss_pred cCCCcccCC
Confidence 999998854
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-54 Score=522.84 Aligned_cols=521 Identities=22% Similarity=0.236 Sum_probs=448.7
Q ss_pred EECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccC-CccccCCCcCcEEEcccCC
Q 040849 80 LLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQI-PDNISHCVNLESLRLGFNE 158 (809)
Q Consensus 80 l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~ 158 (809)
.+.++++++. +|. -.++|++|||++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.
T Consensus 9 ~dcs~~~L~~-vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~ 84 (844)
T 3j0a_A 9 AFYRFCNLTQ-VPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84 (844)
T ss_dssp EEESCCCSSC-CCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCC
T ss_pred EEccCCCCCC-CCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCc
Confidence 4556666765 444 4579999999999999999999999999999999999776666 7889999999999999999
Q ss_pred CCCCCcccccCCCCCCEEEcccccCcccCCcc--CCCCCCCCEEEcccCcccccCc-ccccCCCCccEEEeecCcCCCCc
Q 040849 159 LVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSS--FGNLSSLEVLSASANQFVGQIP-KTLSQLKRMRFIGFGVNKLSGEI 235 (809)
Q Consensus 159 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~ 235 (809)
+.+..|..|+++++|++|+|++|.+++..|.. |+++++|++|++++|.+++..+ ..|+++++|++|++++|.+++..
T Consensus 85 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~ 164 (844)
T 3j0a_A 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVC 164 (844)
T ss_dssp CCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCC
T ss_pred CcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeC
Confidence 99999999999999999999999999877665 9999999999999999998765 57999999999999999999999
Q ss_pred chhccCC--CCCceeccCCcccccccChhhhcCCC------CCcEEEccCccccccCCcccccC---CCCceEecCCCcc
Q 040849 236 PFSIYNL--SSLNYFEFPVNQLQGSLPSDLGFTLP------NLERLNLGENQFTGPIPASISNA---SHLMRLTIPINGF 304 (809)
Q Consensus 236 ~~~l~~l--~~L~~L~l~~n~l~~~~p~~~~~~l~------~L~~L~Ls~N~l~~~~p~~l~~l---~~L~~L~l~~n~l 304 (809)
+..+..+ ++|+.|+++.|.+.+..|..+. .++ .|+.|++++|.+++..+..+... .++..+.++.+..
T Consensus 165 ~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~-~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~ 243 (844)
T 3j0a_A 165 EHELEPLQGKTLSFFSLAANSLYSRVSVDWG-KCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243 (844)
T ss_dssp SGGGHHHHHCSSCCCEECCSBSCCCCCCCCC-SSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCC
T ss_pred HHHcccccCCccceEECCCCccccccccchh-hcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccc
Confidence 9999888 8999999999999988887654 344 39999999999998888877654 5677888764332
Q ss_pred ---------eeeCCC-CCCC--CCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccC
Q 040849 305 ---------SGKVPS-FGNL--HKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRL 372 (809)
Q Consensus 305 ---------~~~~~~-~~~l--~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L 372 (809)
.+..+. |..+ ++|+.|++++|.+.+..+ ..+..+++|+.|+++.|.+.+..|..+..+. +|
T Consensus 244 ~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~------~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~-~L 316 (844)
T 3j0a_A 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS------RVFETLKDLKVLNLAYNKINKIADEAFYGLD-NL 316 (844)
T ss_dssp BCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECS------CCSSSCCCCCEEEEESCCCCEECTTTTTTCS-SC
T ss_pred cccccccccCCCChhhhhccccCCccEEECCCCcccccCh------hhhhcCCCCCEEECCCCcCCCCChHHhcCCC-CC
Confidence 222122 4443 789999999999987544 3456788999999999999999998888876 49
Q ss_pred cEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccc
Q 040849 373 RILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKN 452 (809)
Q Consensus 373 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 452 (809)
++|++++|++.+..|..+..+++|++|++++|.+++..+..|..+++|++|+|++|.+++. ..+++|+.|++++|
T Consensus 317 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N 391 (844)
T 3j0a_A 317 QVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGN 391 (844)
T ss_dssp CEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESC
T ss_pred CEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCC
Confidence 9999999999999899999999999999999999988888999999999999999999843 33789999999999
Q ss_pred cCcccCCccccCCCCCcEEeCcCCcCcccc-CcchhcccCCceEEEccCCcCcccCCC-CccCCCCCCEEEccccccc--
Q 040849 453 MLEGSIPSSLGKCQNLILLGLSNNNLTGTI-PTEVIGLSSLSIYLDLSQNQLNGTLPS-NFGILKNLGVLDVSENKLS-- 528 (809)
Q Consensus 453 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~l~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-- 528 (809)
+++ .+|.. ..+++.|++++|++++.. +..+.++++| +.|+|++|++++..+. .+..+++|+.|+|++|.++
T Consensus 392 ~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~ 466 (844)
T 3j0a_A 392 KLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHL-QILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLA 466 (844)
T ss_dssp CCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTC-CEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSS
T ss_pred Ccc-ccccc---ccccceeecccCccccCchhhhhhcCCcc-ceeeCCCCcccccccccccccCCccccccCCCCccccc
Confidence 998 44543 468999999999998632 2234578888 7999999999976543 4667899999999999997
Q ss_pred ---cccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCC
Q 040849 529 ---GEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPI 605 (809)
Q Consensus 529 ---~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 605 (809)
+..|..|.++++|+.|+|++|++++.+|..|.++++|+.|||++|++++.+|..+. ++|+.|++++|+++|.+|.
T Consensus 467 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~ 544 (844)
T 3j0a_A 467 WETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPD 544 (844)
T ss_dssp CCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSC
T ss_pred cccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChh
Confidence 45567799999999999999999999999999999999999999999998888877 8999999999999999885
Q ss_pred CCCCCCCCcccccCCCCCCCC
Q 040849 606 KGVFSNSSAVSLDGNDNLCGG 626 (809)
Q Consensus 606 ~~~~~~~~~~~~~~n~~lc~~ 626 (809)
.+..+...++.+||..|..
T Consensus 545 --~~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 545 --VFVSLSVLDITHNKFICEC 563 (844)
T ss_dssp --CCSSCCEEEEEEECCCCSS
T ss_pred --HhCCcCEEEecCCCccccc
Confidence 3678888999999999953
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.6e-53 Score=486.55 Aligned_cols=497 Identities=21% Similarity=0.223 Sum_probs=353.9
Q ss_pred CCcccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCc
Q 040849 62 FCQWKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPD 141 (809)
Q Consensus 62 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 141 (809)
.|.|.|| |+.. ++.++ .+|+.+. ++|++|||++|.+++..|..|+++++|++|+|++|++++..|.
T Consensus 3 ~C~~~~~-c~~~----------~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDGR----------SRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EECT----------TSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EECC----------CCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 4999998 8643 33343 4566554 7899999999999998899999999999999999999998889
Q ss_pred cccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcc-cCCccCCCCCCCCEEEcccCcccccC-cccccCCC
Q 040849 142 NISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSG-QIPSSFGNLSSLEVLSASANQFVGQI-PKTLSQLK 219 (809)
Q Consensus 142 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~ 219 (809)
.|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++ ..|..++++++|++|++++|++.+.+ +..|.+++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 99999999999999999998888889999999999999999986 45778999999999999999854444 46899999
Q ss_pred CccEEEeecCcCCCCcchhccCCCCCceeccCCcccccccChhhhcCCCCCcEEEccCccccccC--C-cccccCCCCce
Q 040849 220 RMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPI--P-ASISNASHLMR 296 (809)
Q Consensus 220 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~--p-~~l~~l~~L~~ 296 (809)
+|++|++++|.+++..|..+..+++|++|+++.|.+. .+|..+...+++|++|++++|++++.. | .....+++|+.
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~ 227 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKK 227 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCE
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccc
Confidence 9999999999999999999999999999999999886 667666557899999999999998742 2 22345678889
Q ss_pred EecCCCcceeeCCC-----CCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhcccc
Q 040849 297 LTIPINGFSGKVPS-----FGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTR 371 (809)
Q Consensus 297 L~l~~n~l~~~~~~-----~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~ 371 (809)
|++++|.+++..+. +..+++|+.++++.|.+.+...........+..+.+++.+++..+.+.....
T Consensus 228 L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~--------- 298 (549)
T 2z81_A 228 LAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYL--------- 298 (549)
T ss_dssp EEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGG---------
T ss_pred eeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhh---------
Confidence 99988888764332 4567788888888887765432111111223344455555555544322100
Q ss_pred CcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccc-cCCCCCCEEEeeCCeeecccC---cCCcCCCCccEE
Q 040849 372 LRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSI-GDLHKLQRLGLQGNKFLGEIP---SSIGNLTLLITL 447 (809)
Q Consensus 372 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L 447 (809)
...++..+...++|++|++++|.++ .+|..+ ..+++|++|++++|++++.+| ..++.+++|++|
T Consensus 299 -----------~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L 366 (549)
T 2z81_A 299 -----------FYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTL 366 (549)
T ss_dssp -----------SCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEE
T ss_pred -----------cccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEE
Confidence 0001111223344555555555554 333333 345555555555555554432 224455555555
Q ss_pred EcccccCcccCC--ccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEcccc
Q 040849 448 SFDKNMLEGSIP--SSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSEN 525 (809)
Q Consensus 448 ~L~~N~l~~~~p--~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 525 (809)
++++|++++..+ ..+..+++|++||+++|+++ .+|..+..+++| ++|++++|++++ +|..+ .++|++|||++|
T Consensus 367 ~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L-~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N 441 (549)
T 2z81_A 367 VLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKM-RFLNLSSTGIRV-VKTCI--PQTLEVLDVSNN 441 (549)
T ss_dssp ECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTC-CEEECTTSCCSC-CCTTS--CTTCSEEECCSS
T ss_pred EccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccc-cEEECCCCCccc-ccchh--cCCceEEECCCC
Confidence 555555554322 33555566666666666665 455555555555 566666666653 23222 257888888888
Q ss_pred ccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCC
Q 040849 526 KLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPI 605 (809)
Q Consensus 526 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 605 (809)
++++.+ ..+++|++|+|++|+++ .+|. ...+++|++|||++|++++.+|..|..+++|++|++++|++.|.+|.
T Consensus 442 ~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 442 NLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred Chhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 887643 46788888888888888 5665 46788888888888888888888888888899999999988887773
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-52 Score=480.60 Aligned_cols=490 Identities=19% Similarity=0.193 Sum_probs=371.5
Q ss_pred CCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEc
Q 040849 99 SFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAV 178 (809)
Q Consensus 99 ~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 178 (809)
+++++|||++|.+++..+.+|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 35677777777777666667777777777777777777666666777777777777777776666666777777777777
Q ss_pred ccccCcccCCccCCCCCCCCEEEcccCcccc-cCcccccCCCCccEEEeecCcCCCCcchhccCCCCC----ceeccCCc
Q 040849 179 HYNNLSGQIPSSFGNLSSLEVLSASANQFVG-QIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSL----NYFEFPVN 253 (809)
Q Consensus 179 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L----~~L~l~~n 253 (809)
++|++++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|.+++..+..+..+++| +.++++.|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 7777765555557777777777777777765 356677777777777777777776666666666666 66777777
Q ss_pred ccccccChhhhcCCCCCcEEEccCccccc-cCCcccccCCCCceEecCCCccee-----eCC-C-CCCCCC--CcEEEec
Q 040849 254 QLQGSLPSDLGFTLPNLERLNLGENQFTG-PIPASISNASHLMRLTIPINGFSG-----KVP-S-FGNLHK--LQWVSIS 323 (809)
Q Consensus 254 ~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~~-----~~~-~-~~~l~~--L~~L~Ls 323 (809)
.+++..|..+. ..+|+.|++++|.... .++..+..++.++.+.+....+.. .++ . +..+++ ++.++++
T Consensus 188 ~l~~~~~~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 188 PMNFIQPGAFK--EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp CCCEECTTTTT--TCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CceecCHHHhc--cCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 77654444432 2367777777764332 234445555555555443222211 111 1 333333 3445555
Q ss_pred cc-cCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCC
Q 040849 324 MN-HLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLE 402 (809)
Q Consensus 324 ~n-~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls 402 (809)
.+ .+.+..+ ..+..+++|+.++++.|.+. .+|..+... +|+.|++++|.+. .+|. ..+++|++|+++
T Consensus 266 ~~~~~~~~~~------~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~--~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~ 333 (570)
T 2z63_A 266 YLDYYLDDII------DLFNCLTNVSSFSLVSVTIE-RVKDFSYNF--GWQHLELVNCKFG-QFPT--LKLKSLKRLTFT 333 (570)
T ss_dssp ETTEEESCST------TTTGGGTTCSEEEEESCEEC-SCCBCCSCC--CCSEEEEESCBCS-SCCB--CBCSSCCEEEEE
T ss_pred cchhhhhhch------hhhcCcCcccEEEecCccch-hhhhhhccC--CccEEeeccCccc-ccCc--ccccccCEEeCc
Confidence 54 3333222 34456778888888888877 467777666 5999999999998 5554 578899999999
Q ss_pred CccceecCCccccCCCCCCEEEeeCCeeeccc--CcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCcc
Q 040849 403 GNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEI--PSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTG 480 (809)
Q Consensus 403 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 480 (809)
+|.+.+..+. ..+++|++|++++|++++.. |..+.++++|++|++++|.+.+..+. +..+++|+.|++++|++++
T Consensus 334 ~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~ 410 (570)
T 2z63_A 334 SNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQ 410 (570)
T ss_dssp SCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEES
T ss_pred CCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCcccc
Confidence 9998876665 78899999999999998664 67788999999999999999876555 9999999999999999997
Q ss_pred ccC-cchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccc-cccCccccCCCCCCEEeCcCCccccccchh
Q 040849 481 TIP-TEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLS-GEIPNSLGSCVRLEQLGMNGNFFQGNIPSS 558 (809)
Q Consensus 481 ~~p-~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 558 (809)
..| ..+..+++| ++|++++|++++..|..+..+++|++|++++|+++ +.+|..+..+++|++|++++|++++..|..
T Consensus 411 ~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~ 489 (570)
T 2z63_A 411 MSEFSVFLSLRNL-IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489 (570)
T ss_dssp CTTSCTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT
T ss_pred ccchhhhhcCCCC-CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhh
Confidence 766 567888999 79999999999999999999999999999999998 689999999999999999999999999999
Q ss_pred hcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCCC
Q 040849 559 FSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIK 606 (809)
Q Consensus 559 ~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~ 606 (809)
|.++++|+.|++++|++++.+|..|.++++|++|++++|+++|.+|..
T Consensus 490 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 490 FNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred hhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 999999999999999999999999999999999999999999998864
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-50 Score=465.34 Aligned_cols=509 Identities=23% Similarity=0.235 Sum_probs=430.0
Q ss_pred cEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccc
Q 040849 102 RVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYN 181 (809)
Q Consensus 102 ~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 181 (809)
+..+.++.+++ .+|..+. +++++|+|++|.+++..+.+|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 10 ~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 86 (570)
T 2z63_A 10 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (570)
T ss_dssp TEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred cEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCC
Confidence 34555665665 4666553 57999999999999988889999999999999999999888889999999999999999
Q ss_pred cCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCC-CcchhccCCCCCceeccCCcccccccC
Q 040849 182 NLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSG-EIPFSIYNLSSLNYFEFPVNQLQGSLP 260 (809)
Q Consensus 182 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~l~~n~l~~~~p 260 (809)
++++..|..|+++++|++|++++|++++..+..++++++|++|++++|.+++ .+|..+.++++|++|++++|.+++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~ 166 (570)
T 2z63_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (570)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECG
T ss_pred cCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecH
Confidence 9998888999999999999999999998777679999999999999999987 479999999999999999999997666
Q ss_pred hhhhcCCCCC----cEEEccCccccccCCcccccCCCCceEecCCCcceee-CCC-CCCCCCCcEEEeccccCCCCCCC-
Q 040849 261 SDLGFTLPNL----ERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGK-VPS-FGNLHKLQWVSISMNHLGNGEKD- 333 (809)
Q Consensus 261 ~~~~~~l~~L----~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~-~~~-~~~l~~L~~L~Ls~n~l~~~~~~- 333 (809)
..+. .+++| +.+++++|.+++..|..+... +|+.|++++|..... .+. +..++.++.+.+....+......
T Consensus 167 ~~~~-~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~ 244 (570)
T 2z63_A 167 TDLR-VLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 244 (570)
T ss_dssp GGGH-HHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCE
T ss_pred HHcc-chhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhh
Confidence 6665 56677 899999999998888887766 799999998854321 122 56677777777765544332110
Q ss_pred --chhhhhcccccCCccEEecccc-ccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecC
Q 040849 334 --DLEFVNSLVNASRLELLGININ-NFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRI 410 (809)
Q Consensus 334 --~~~~~~~l~~~~~L~~L~l~~n-~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 410 (809)
....+..+..+ .++.++++.+ .+.+..|..+..+. +|+.|++++|.+. .+|..+..+ +|++|++++|.+. .+
T Consensus 245 ~~~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~~~~~l~-~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l 319 (570)
T 2z63_A 245 KFDKSALEGLCNL-TIEEFRLAYLDYYLDDIIDLFNCLT-NVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QF 319 (570)
T ss_dssp ECCTTTTGGGGGS-EEEEEEEEETTEEESCSTTTTGGGT-TCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SC
T ss_pred hcchhhhcccccc-chhhhhhhcchhhhhhchhhhcCcC-cccEEEecCccch-hhhhhhccC-CccEEeeccCccc-cc
Confidence 00111122222 3667777777 77888888887775 4999999999998 578888888 9999999999998 55
Q ss_pred CccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccC--CccccCCCCCcEEeCcCCcCccccCcchhc
Q 040849 411 PGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSI--PSSLGKCQNLILLGLSNNNLTGTIPTEVIG 488 (809)
Q Consensus 411 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 488 (809)
|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|.+++.. |..+..+++|++|++++|++++. |..+..
T Consensus 320 ~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~ 394 (570)
T 2z63_A 320 PT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLG 394 (570)
T ss_dssp CB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEET
T ss_pred Cc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-cccccc
Confidence 55 5789999999999999877765 78899999999999998764 77889999999999999999964 444889
Q ss_pred ccCCceEEEccCCcCcccCC-CCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccc-cccchhhcCCCCCC
Q 040849 489 LSSLSIYLDLSQNQLNGTLP-SNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQ-GNIPSSFSSLRGIE 566 (809)
Q Consensus 489 l~~l~~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~ 566 (809)
++++ +.|++++|++++..| ..+..+++|++|++++|++++..|..+.++++|++|++++|.++ +.+|..|..+++|+
T Consensus 395 l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~ 473 (570)
T 2z63_A 395 LEQL-EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT 473 (570)
T ss_dssp CTTC-CEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCC
T ss_pred cCCC-CEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCC
Confidence 9999 899999999998776 57899999999999999999999999999999999999999998 68999999999999
Q ss_pred EEeCCCCCcccccccccccCCCCCeEEccCCcccccCCCC-CCCCCCCcccccCCCCCCCC
Q 040849 567 NLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIK-GVFSNSSAVSLDGNDNLCGG 626 (809)
Q Consensus 567 ~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~lc~~ 626 (809)
.||+++|++++.+|..|..+++|++|++++|++++.+|.. ..+..+..+++.+|+..|..
T Consensus 474 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 474 FLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred EEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 9999999999999999999999999999999999877643 45667788899999987753
No 16
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=9.4e-51 Score=467.98 Aligned_cols=480 Identities=20% Similarity=0.212 Sum_probs=372.7
Q ss_pred ccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEccc
Q 040849 101 LRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHY 180 (809)
Q Consensus 101 L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 180 (809)
..+.|+++|.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 7 ~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 7 SGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp TSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 344688889988 5676654 7899999999999988888999999999999999999988888999999999999999
Q ss_pred ccCcccCCccCCCCCCCCEEEcccCcccc-cCcccccCCCCccEEEeecCcCCCCcc-hhccCCCCCceeccCCcccccc
Q 040849 181 NNLSGQIPSSFGNLSSLEVLSASANQFVG-QIPKTLSQLKRMRFIGFGVNKLSGEIP-FSIYNLSSLNYFEFPVNQLQGS 258 (809)
Q Consensus 181 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~l~~~ 258 (809)
|++++..|..|+++++|++|++++|++++ ..|..++++++|++|++++|.+.+.+| ..+.++++|++|++++|.+++.
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 163 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc
Confidence 99998888889999999999999999986 356788999999999999998554544 5778888888888888888877
Q ss_pred cChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeC----CCCCCCCCCcEEEeccccCCCCCCCc
Q 040849 259 LPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKV----PSFGNLHKLQWVSISMNHLGNGEKDD 334 (809)
Q Consensus 259 ~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~----~~~~~l~~L~~L~Ls~n~l~~~~~~~ 334 (809)
.|..+. .+++|+.|+++.|.+....+..+..+++|+.|++++|.+++.. +....+++
T Consensus 164 ~~~~l~-~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~------------------ 224 (549)
T 2z81_A 164 QSQSLK-SIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSP------------------ 224 (549)
T ss_dssp CTTTTT-TCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCC------------------
T ss_pred Chhhhh-ccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhc------------------
Confidence 777766 6777888888877765322222344666777777766665531 11233444
Q ss_pred hhhhhcccccCCccEEeccccccccccchhhhh---ccccCcEEEccCCcccccC------CccccCCCCCCeeeCCCcc
Q 040849 335 LEFVNSLVNASRLELLGININNFGGMLPEAVGN---LSTRLRILRVGNNQLFGNI------PSGLRNLVNLERLLLEGNQ 405 (809)
Q Consensus 335 ~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~---~~~~L~~L~Ls~n~l~~~~------p~~l~~l~~L~~L~Ls~N~ 405 (809)
|+.|+++.|.+.+..+..+.. ...+|+.+++++|.+.+.. ...+..+++|+.|++.++.
T Consensus 225 ------------L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~ 292 (549)
T 2z81_A 225 ------------MKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLH 292 (549)
T ss_dssp ------------CCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCB
T ss_pred ------------ccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccc
Confidence 444555555444443333321 1234777777777776531 2345678889999999887
Q ss_pred ceecC-----CccccCCCCCCEEEeeCCeeecccCcCC-cCCCCccEEEcccccCcccCC---ccccCCCCCcEEeCcCC
Q 040849 406 FTGRI-----PGSIGDLHKLQRLGLQGNKFLGEIPSSI-GNLTLLITLSFDKNMLEGSIP---SSLGKCQNLILLGLSNN 476 (809)
Q Consensus 406 l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~Ls~N 476 (809)
+.... +..+...++|+.|++++|++. .+|..+ ..+++|++|++++|++++.+| ..+..+++|++|++++|
T Consensus 293 i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N 371 (549)
T 2z81_A 293 IPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQN 371 (549)
T ss_dssp CSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTS
T ss_pred cchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCC
Confidence 65321 222334578999999999987 566665 579999999999999998764 34788999999999999
Q ss_pred cCccccC--cchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccc
Q 040849 477 NLTGTIP--TEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGN 554 (809)
Q Consensus 477 ~l~~~~p--~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 554 (809)
++++..+ ..+..+++| ++|++++|+++ .+|..+..+++|++|++++|+++ .+|..+ .++|++|+|++|++++.
T Consensus 372 ~l~~~~~~~~~~~~l~~L-~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~ 446 (549)
T 2z81_A 372 HLRSMQKTGEILLTLKNL-TSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSF 446 (549)
T ss_dssp CCCCHHHHHHHGGGCTTC-CEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCC
T ss_pred cccccccchhhhhcCCCC-CEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchh--cCCceEEECCCCChhhh
Confidence 9986432 457889999 79999999999 67888999999999999999998 455544 26899999999999975
Q ss_pred cchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCCC-CCCCCCCcccccCCCCCCCC
Q 040849 555 IPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIK-GVFSNSSAVSLDGNDNLCGG 626 (809)
Q Consensus 555 ~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~lc~~ 626 (809)
+ ..+++|++|||++|+++ .+|. ...+++|++|++++|++++.+|.. ..+..+...++.+|+..|..
T Consensus 447 ~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 447 S----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp C----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred c----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 4 57899999999999999 5676 568999999999999999987752 45677888999999988853
No 17
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=9.7e-49 Score=459.69 Aligned_cols=485 Identities=22% Similarity=0.216 Sum_probs=267.7
Q ss_pred CccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcc
Q 040849 100 FLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVH 179 (809)
Q Consensus 100 ~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 179 (809)
++++|||++|+|++..|.+|.++++|++|||++|+|++..|.+|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 56777777777776666677777777777777777776666677777777777777777776666667777777777777
Q ss_pred cccCcccCCccCCCCCCCCEEEcccCcccc-cCcccccCCCCccEEEeecCcCCCCcchhccCCCCCc----eeccCCcc
Q 040849 180 YNNLSGQIPSSFGNLSSLEVLSASANQFVG-QIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLN----YFEFPVNQ 254 (809)
Q Consensus 180 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~----~L~l~~n~ 254 (809)
+|++++..+..|+++++|++|++++|++++ ..|..++.+++|++|++++|++++..+..+..+.+++ .++++.|.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 777776666667777777777777777764 3456667777777777777777776666666554433 45666666
Q ss_pred cccccChhhhcCCCCCcEEEccCcccccc-CCcccccCCCCceEecCCCcc-----------------------------
Q 040849 255 LQGSLPSDLGFTLPNLERLNLGENQFTGP-IPASISNASHLMRLTIPINGF----------------------------- 304 (809)
Q Consensus 255 l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~l~~n~l----------------------------- 304 (809)
+.. ++.... ....++.+++.+|..... .+..+..+..++...+..+..
T Consensus 213 l~~-i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 213 MNF-IQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCE-ECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred ccc-cCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 663 333322 234455666666644322 222333444444333322111
Q ss_pred -----eeeCCCCCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccC
Q 040849 305 -----SGKVPSFGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGN 379 (809)
Q Consensus 305 -----~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~ 379 (809)
.+....+..+.+++.+++..+.+... ..+.....++.+++..|.+.+..+..+ ..|+.+++..
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--------~~~~~~~~L~~L~l~~~~~~~~~~~~l----~~L~~l~l~~ 358 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--------KDFSYNFGWQHLELVNCKFGQFPTLKL----KSLKRLTFTS 358 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEEC--------GGGGSCCCCSEEEEESCEESSCCCCBC----TTCCEEEEES
T ss_pred hcccccchhhhhhhhcccccccccccccccc--------cccccchhhhhhhcccccccCcCcccc----hhhhhccccc
Confidence 11111133333444444443333221 112223344555555544443322211 2245555555
Q ss_pred CcccccCCccccCCCCCCeeeCCCccce--ecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCccc
Q 040849 380 NQLFGNIPSGLRNLVNLERLLLEGNQFT--GRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGS 457 (809)
Q Consensus 380 n~l~~~~p~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 457 (809)
|.+... .....+++|+.|++++|.+. +..+..+..+.+|++|+++.|.+.+ .+..+..+++|+.++++.|.....
T Consensus 359 n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~ 435 (635)
T 4g8a_A 359 NKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQM 435 (635)
T ss_dssp CCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEEST
T ss_pred ccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccc
Confidence 544322 22334555555555555553 2233344455555555555555543 233445555555555555554433
Q ss_pred CC-ccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcC-cccCCCCccCCCCCCEEEccccccccccCccc
Q 040849 458 IP-SSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQL-NGTLPSNFGILKNLGVLDVSENKLSGEIPNSL 535 (809)
Q Consensus 458 ~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 535 (809)
.+ ..+..+++++.++++.|++.+..|..+..++.+ +.|++++|++ .+..|..|..+++|++|||++|++++..|..|
T Consensus 436 ~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L-~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f 514 (635)
T 4g8a_A 436 SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL-EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 514 (635)
T ss_dssp TSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC-CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred ccccccccccccccccccccccccccccccccchhh-hhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHH
Confidence 32 334555555555555555555555555555555 4555555543 23345555555555555555555555555555
Q ss_pred cCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccC-CCCCeEEccCCccccc
Q 040849 536 GSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENF-LFLQNLNLSFNHFEGE 602 (809)
Q Consensus 536 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l-~~L~~l~ls~N~l~g~ 602 (809)
.++++|++|+|++|+|++..|..|.++++|++|||++|+|++.+|..|..+ ++|++|++++|+|++.
T Consensus 515 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 515 NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp TTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred cCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 555555555555555555555555555555555555555555555555555 3555555555555543
No 18
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.3e-49 Score=450.73 Aligned_cols=463 Identities=20% Similarity=0.239 Sum_probs=352.7
Q ss_pred cEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccc
Q 040849 102 RVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYN 181 (809)
Q Consensus 102 ~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 181 (809)
++||+++|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57899999998 5777666 88999999999998877788889999999999999998888888889999999999999
Q ss_pred cCcccCCccCCCCCCCCEEEcccCcccc-cCcccccCCCCccEEEeecCcCCCCcchhccCCCCC--ceeccCCccc--c
Q 040849 182 NLSGQIPSSFGNLSSLEVLSASANQFVG-QIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSL--NYFEFPVNQL--Q 256 (809)
Q Consensus 182 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L--~~L~l~~n~l--~ 256 (809)
+++ .+|.. .+++|++|++++|++++ .+|..|+++++|++|++++|.+++ ..+..+++| +.|+++.|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 888 45655 78889999999998887 467888888888888888888875 344555555 6666666666 4
Q ss_pred cccChhhhcCCC-CCcEEEccCccccccCCc-ccccCCCCceEecCCCcceeeCCCCCCCCCCcEEEeccccCCCCCCCc
Q 040849 257 GSLPSDLGFTLP-NLERLNLGENQFTGPIPA-SISNASHLMRLTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNGEKDD 334 (809)
Q Consensus 257 ~~~p~~~~~~l~-~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 334 (809)
+..|..+. .+. +...+++++|.+.+.++. . +..+++|+.++++.|.........
T Consensus 154 ~~~~~~l~-~l~~~~l~l~l~~n~~~~~~~~~~-----------------------~~~l~~L~~L~l~~n~~~~~~~~~ 209 (520)
T 2z7x_B 154 KEDPEGLQ-DFNTESLHIVFPTNKEFHFILDVS-----------------------VKTVANLELSNIKCVLEDNKCSYF 209 (520)
T ss_dssp SCCTTTTT-TCCEEEEEEECCSSSCCCCCCCCC-----------------------CTTCSEEEECCEEECCSTTTTHHH
T ss_pred cccccccc-ccccceEEEEeccCcchhhhhhhh-----------------------hhcccceeecccccccccccccee
Confidence 44454433 111 122344444444433322 2 444555555555554311100000
Q ss_pred hhhhhcccccCCccEEeccccccccccchhhhhc--cccCcEEEccCCcccccCCccc-----cCCCCCCeeeCCCccce
Q 040849 335 LEFVNSLVNASRLELLGININNFGGMLPEAVGNL--STRLRILRVGNNQLFGNIPSGL-----RNLVNLERLLLEGNQFT 407 (809)
Q Consensus 335 ~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~--~~~L~~L~Ls~n~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~ 407 (809)
......+..+++|+.++++.|.+.+..+..+... .++|++|++++|++.|.+|..+ .++++|+.+++++|.+
T Consensus 210 ~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~- 288 (520)
T 2z7x_B 210 LSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF- 288 (520)
T ss_dssp HHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-
T ss_pred ecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-
Confidence 1112244555666666666666655433322211 2369999999999998899888 8999999999999998
Q ss_pred ecCC-ccccCC---CCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCcc--c
Q 040849 408 GRIP-GSIGDL---HKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTG--T 481 (809)
Q Consensus 408 ~~~p-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~ 481 (809)
.+| ..+..+ .+|+.|++++|.+.+.. .+..+++|++|++++|++++.+|..+.++++|++|++++|++++ .
T Consensus 289 -~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 365 (520)
T 2z7x_B 289 -GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSK 365 (520)
T ss_dssp -CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHH
T ss_pred -ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCcccc
Confidence 455 444444 67999999999986432 12678999999999999999899999999999999999999996 6
Q ss_pred cCcchhcccCCceEEEccCCcCcccCCC-CccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhc
Q 040849 482 IPTEVIGLSSLSIYLDLSQNQLNGTLPS-NFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFS 560 (809)
Q Consensus 482 ~p~~~~~l~~l~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 560 (809)
+|..+..+++| ++|++++|++++.+|. .+..+++|++|++++|++++.+|..+. ++|++|++++|+++ .+|..+.
T Consensus 366 ~~~~~~~l~~L-~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~ 441 (520)
T 2z7x_B 366 IAEMTTQMKSL-QQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV 441 (520)
T ss_dssp HHHHHTTCTTC-CEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG
T ss_pred chHHHhhCCCC-CEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh
Confidence 67888999999 7999999999985554 588899999999999999998888775 79999999999999 7888888
Q ss_pred CCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCC
Q 040849 561 SLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPI 605 (809)
Q Consensus 561 ~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 605 (809)
.+++|++||+++|+++...+..|..+++|++|++++|++++.++.
T Consensus 442 ~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 442 KLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp GCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 999999999999999964444599999999999999999987663
No 19
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.6e-50 Score=466.89 Aligned_cols=452 Identities=20% Similarity=0.262 Sum_probs=372.7
Q ss_pred CCccEEeCCCCCCCccCCccccccccCCccccCCCcC------cc------cCCccccCCCcCcEEEcccCCCCCCCccc
Q 040849 99 SFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTF------GG------QIPDNISHCVNLESLRLGFNELVGKVPRK 166 (809)
Q Consensus 99 ~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 166 (809)
.+++.|+|++|.++|.+|.+|+++++|++|+|++|.+ .+ .+|... +..|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4789999999999999999999999999999999977 22 344433 45666 788888887777766
Q ss_pred ccC-CCCCCEEEcccccCcccCCccCCCCCCCCEEEc--ccCcccccCcccccCCCCccEEEeecCcCCCC---------
Q 040849 167 LGS-LSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSA--SANQFVGQIPKTLSQLKRMRFIGFGVNKLSGE--------- 234 (809)
Q Consensus 167 l~~-l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L--s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~--------- 234 (809)
+.. +.++..+++....+.. .....++.+.+ ..|++++ +|..++++++|++|++++|.+++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred HHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 653 2233333333332221 12223333333 3688999 899999999999999999999996
Q ss_pred --------cchhcc--CCCCCceeccCCcccccccChhhhcCCCCCcEEEccCcc-ccc-cCCcccccC------CCCce
Q 040849 235 --------IPFSIY--NLSSLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQ-FTG-PIPASISNA------SHLMR 296 (809)
Q Consensus 235 --------~~~~l~--~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~-l~~-~~p~~l~~l------~~L~~ 296 (809)
+|..++ ++++|++|++++|.+.+.+|..+. .+++|++|++++|+ +++ .+|..+..+ ++|+.
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~ 309 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK-ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQI 309 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT-TCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHh-cCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCE
Confidence 899999 999999999999999999998887 89999999999998 998 889887765 45555
Q ss_pred EecCCCcceeeCCCCCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccch--hhhhccccCcE
Q 040849 297 LTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPE--AVGNLSTRLRI 374 (809)
Q Consensus 297 L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~--~~~~~~~~L~~ 374 (809)
|++++|+++ .+|. .+..+. +|++
T Consensus 310 L~L~~n~l~------------------------------------------------------~ip~~~~l~~l~-~L~~ 334 (636)
T 4eco_A 310 IYIGYNNLK------------------------------------------------------TFPVETSLQKMK-KLGM 334 (636)
T ss_dssp EECCSSCCS------------------------------------------------------SCCCHHHHTTCT-TCCE
T ss_pred EECCCCcCC------------------------------------------------------ccCchhhhccCC-CCCE
Confidence 555444443 3343 444443 3888
Q ss_pred EEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCC-CCEEEeeCCeeecccCcCCcCCC--CccEEEccc
Q 040849 375 LRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHK-LQRLGLQGNKFLGEIPSSIGNLT--LLITLSFDK 451 (809)
Q Consensus 375 L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~ 451 (809)
|++++|++.|.+| .+..+++|++|++++|+++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|++|++++
T Consensus 335 L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~ 411 (636)
T 4eco_A 335 LECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSY 411 (636)
T ss_dssp EECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCS
T ss_pred EeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcC
Confidence 8888999988888 8999999999999999999 88889999999 999999999999 7888887765 899999999
Q ss_pred ccCcccCCcccc-------CCCCCcEEeCcCCcCccccCcchh-cccCCceEEEccCCcCcccCCC-CccCCC-------
Q 040849 452 NMLEGSIPSSLG-------KCQNLILLGLSNNNLTGTIPTEVI-GLSSLSIYLDLSQNQLNGTLPS-NFGILK------- 515 (809)
Q Consensus 452 N~l~~~~p~~l~-------~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~l~~~L~Ls~N~l~~~~p~-~~~~l~------- 515 (809)
|.+++.+|..+. .+++|++|++++|+++ .+|..+. .++++ ++|+|++|+++ .+|. .+....
T Consensus 412 N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L-~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~ 488 (636)
T 4eco_A 412 NEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPL-SSINLMGNMLT-EIPKNSLKDENENFKNTY 488 (636)
T ss_dssp SCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCC-SEEECCSSCCS-BCCSSSSEETTEECTTGG
T ss_pred CcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCC-CEEECCCCCCC-CcCHHHhccccccccccC
Confidence 999999999998 8889999999999999 5666554 58888 79999999999 5554 443332
Q ss_pred CCCEEEccccccccccCcccc--CCCCCCEEeCcCCccccccchhhcCCCCCCEEeC------CCCCcccccccccccCC
Q 040849 516 NLGVLDVSENKLSGEIPNSLG--SCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDL------SRNNLSGRIPKYFENFL 587 (809)
Q Consensus 516 ~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL------s~N~l~~~~p~~~~~l~ 587 (809)
+|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+.++++|+.|+| ++|++.+.+|..+.+++
T Consensus 489 ~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~ 566 (636)
T 4eco_A 489 LLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCP 566 (636)
T ss_dssp GCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCS
T ss_pred CccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCC
Confidence 9999999999999 7888887 99999999999999998 8999999999999999 56889999999999999
Q ss_pred CCCeEEccCCcccccCCCCCCCCCCCcccccCCCCCCCC
Q 040849 588 FLQNLNLSFNHFEGEVPIKGVFSNSSAVSLDGNDNLCGG 626 (809)
Q Consensus 588 ~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc~~ 626 (809)
+|++|++++|++ +.+|.. .+..+...++.+|+..|-.
T Consensus 567 ~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 567 SLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNISID 603 (636)
T ss_dssp SCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCEEE
T ss_pred CCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCcccc
Confidence 999999999999 788865 4477888889999877743
No 20
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.7e-49 Score=454.18 Aligned_cols=458 Identities=20% Similarity=0.224 Sum_probs=355.5
Q ss_pred EEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccC
Q 040849 78 TALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFN 157 (809)
Q Consensus 78 ~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 157 (809)
+.+|++++.++ .+|..+. ++|++|||++|.+++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 35899999999 5887776 89999999999999988899999999999999999999988999999999999999999
Q ss_pred CCCCCCcccccCCCCCCEEEcccccCcc-cCCccCCCCCCCCEEEcccCcccccCcccccCCCCc--cEEEeecCcC--C
Q 040849 158 ELVGKVPRKLGSLSKLRTLAVHYNNLSG-QIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRM--RFIGFGVNKL--S 232 (809)
Q Consensus 158 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L--~~L~L~~n~l--~ 232 (809)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++ ..+..+++| +.|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 998 56666 89999999999999997 578999999999999999999986 456777777 9999999999 8
Q ss_pred CCcchhccCCC-CCceeccCCcccccccChhhhcCCCCCcEEEccCcc-------ccccCCcccccCCCCceEecCCCcc
Q 040849 233 GEIPFSIYNLS-SLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQ-------FTGPIPASISNASHLMRLTIPINGF 304 (809)
Q Consensus 233 ~~~~~~l~~l~-~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~-------l~~~~p~~l~~l~~L~~L~l~~n~l 304 (809)
+..|..+..++ ....++++.|.+.+.++......+++|+.+++++|. +.+.+| .+..+++|+.|+++.|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 88888888776 344678899999888887766689999999999997 665555 667777777777777666
Q ss_pred eeeCCCCCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhh-----hhccccCcEEEccC
Q 040849 305 SGKVPSFGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAV-----GNLSTRLRILRVGN 379 (809)
Q Consensus 305 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~-----~~~~~~L~~L~Ls~ 379 (809)
++..+. ........++|+.|++++|.+.|.+|..+ ..+. .|+.+++++
T Consensus 233 ~~~~~~--------------------------~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~-~L~~l~l~~ 285 (520)
T 2z7x_B 233 TWNSFI--------------------------RILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLK-ALSIHQVVS 285 (520)
T ss_dssp EHHHHH--------------------------HHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCC-EEEEEEEEE
T ss_pred CHHHHH--------------------------HHHHHhhhCcccEEEeecccccCccccchhhcccccCc-eeEeccccc
Confidence 542211 00000112345555555555555555554 3333 366666666
Q ss_pred CcccccCC-ccccCC---CCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCc
Q 040849 380 NQLFGNIP-SGLRNL---VNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLE 455 (809)
Q Consensus 380 n~l~~~~p-~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 455 (809)
|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..+.++++|++|++++|+++
T Consensus 286 n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 361 (520)
T 2z7x_B 286 DVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK 361 (520)
T ss_dssp CCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCC
T ss_pred cce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccC
Confidence 666 334 334333 56777777777665322 1256777777888888777777777777778888888888877
Q ss_pred c--cCCccccCCCCCcEEeCcCCcCccccCcc-hhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccC
Q 040849 456 G--SIPSSLGKCQNLILLGLSNNNLTGTIPTE-VIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIP 532 (809)
Q Consensus 456 ~--~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 532 (809)
+ .+|..+..+++|++|++++|++++.+|.. +..++++ +.|++++|++++..|..+. ++|+.|||++|+++ .+|
T Consensus 362 ~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip 437 (520)
T 2z7x_B 362 ELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL-LSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIP 437 (520)
T ss_dssp BHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC-CEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCC
T ss_pred ccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC-CEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccc
Confidence 5 45566778888888888888887656654 6667777 6888888888877776654 78999999999998 788
Q ss_pred ccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccc
Q 040849 533 NSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIP 580 (809)
Q Consensus 533 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p 580 (809)
..+..+++|++|++++|++++..+..|..+++|+.|++++|++++..+
T Consensus 438 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 438 KQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 888899999999999999995444449999999999999999987665
No 21
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=8.3e-47 Score=443.26 Aligned_cols=498 Identities=22% Similarity=0.198 Sum_probs=397.2
Q ss_pred cCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCC
Q 040849 114 EIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGN 193 (809)
Q Consensus 114 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 193 (809)
.+|..+. +.+++|||++|+|++..|.+|.++++|++|||++|++++..|++|.++++|++|+|++|++++..+..|.+
T Consensus 45 ~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~ 122 (635)
T 4g8a_A 45 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 122 (635)
T ss_dssp SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTT
T ss_pred ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcC
Confidence 3555442 47999999999999888889999999999999999999888889999999999999999999888889999
Q ss_pred CCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCC-cchhccCCCCCceeccCCcccccccChhhhcCCC----
Q 040849 194 LSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGE-IPFSIYNLSSLNYFEFPVNQLQGSLPSDLGFTLP---- 268 (809)
Q Consensus 194 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~---- 268 (809)
+++|++|++++|++++..+..|+++++|++|++++|.+++. .|..+..+++|++|++++|++++..|..+. .+.
T Consensus 123 L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~-~L~~l~~ 201 (635)
T 4g8a_A 123 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR-VLHQMPL 201 (635)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH-HHHTCTT
T ss_pred CCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccccc-chhhhhh
Confidence 99999999999999988888899999999999999999864 688899999999999999999977676654 233
Q ss_pred CCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCC--CCCCCCCcEEEeccccCCCCCCC------chhh---
Q 040849 269 NLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPS--FGNLHKLQWVSISMNHLGNGEKD------DLEF--- 337 (809)
Q Consensus 269 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~------~~~~--- 337 (809)
....++++.|.++...+..+ ....+..+++..|......+. +..+..++...+..+........ .+..
T Consensus 202 ~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 280 (635)
T 4g8a_A 202 LNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCN 280 (635)
T ss_dssp CCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGG
T ss_pred hhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccc
Confidence 34579999999986555544 444577888888866543322 55666666666654433222110 0000
Q ss_pred ------------------hhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCee
Q 040849 338 ------------------VNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERL 399 (809)
Q Consensus 338 ------------------~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L 399 (809)
...+.....++.+++..+.+....+ +.. ...++.|++.+|.+.+..+. .+..|+.+
T Consensus 281 l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~--~~~-~~~L~~L~l~~~~~~~~~~~---~l~~L~~l 354 (635)
T 4g8a_A 281 LTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKD--FSY-NFGWQHLELVNCKFGQFPTL---KLKSLKRL 354 (635)
T ss_dssp SEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGG--GGS-CCCCSEEEEESCEESSCCCC---BCTTCCEE
T ss_pred hhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccc--ccc-chhhhhhhcccccccCcCcc---cchhhhhc
Confidence 0112233455566666555544322 111 23478888888887654433 45677888
Q ss_pred eCCCccceecCCccccCCCCCCEEEeeCCeee--cccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCc
Q 040849 400 LLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFL--GEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNN 477 (809)
Q Consensus 400 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 477 (809)
++..|.+... .....+++|+.|++++|.+. +..+..+..+.+|+.+++..|.+.. .+..+..+++|+.++++.|+
T Consensus 355 ~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~ 431 (635)
T 4g8a_A 355 TFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSN 431 (635)
T ss_dssp EEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSE
T ss_pred ccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcc
Confidence 8888877643 23457899999999999885 3456667788899999999999875 45678889999999999998
Q ss_pred CccccC-cchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEcccccc-ccccCccccCCCCCCEEeCcCCcccccc
Q 040849 478 LTGTIP-TEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKL-SGEIPNSLGSCVRLEQLGMNGNFFQGNI 555 (809)
Q Consensus 478 l~~~~p-~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 555 (809)
.....+ ..+..+..+ ..++++.|++.+..+..+..++.|+.|+|++|++ .+..|..|..+++|++|+|++|++++.+
T Consensus 432 ~~~~~~~~~~~~l~~l-~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~ 510 (635)
T 4g8a_A 432 LKQMSEFSVFLSLRNL-IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLS 510 (635)
T ss_dssp EESTTSSCTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEEC
T ss_pred cccccccccccccccc-ccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcC
Confidence 876554 456778888 7999999999999999999999999999999975 5568899999999999999999999999
Q ss_pred chhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCCCC-C-CCCCCcccccCCCCCCC
Q 040849 556 PSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIKG-V-FSNSSAVSLDGNDNLCG 625 (809)
Q Consensus 556 p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~-~-~~~~~~~~~~~n~~lc~ 625 (809)
|.+|.++++|++|+|++|+|++.+|..|.++++|++||+++|++++.+|..- . ..++..+++.+||+.|.
T Consensus 511 ~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 511 PTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp TTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred hHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 9999999999999999999999999999999999999999999999888541 2 25678889999999995
No 22
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.4e-48 Score=456.12 Aligned_cols=436 Identities=21% Similarity=0.249 Sum_probs=304.1
Q ss_pred CCccEEeCCCCCCCccCCccccccccCCcccc-CCCcCcccCCccccCC----CcCc--EEEc----------ccCCCCC
Q 040849 99 SFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWL-DNNTFGGQIPDNISHC----VNLE--SLRL----------GFNELVG 161 (809)
Q Consensus 99 ~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~~p~~~~~l----~~L~--~L~L----------s~N~l~~ 161 (809)
.+++.|+|++|.++|.+|.+|++|++|++|+| ++|.++|..|...... ...+ .+.. ....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 9999988755332111 0000 0000 0000000
Q ss_pred -----------CCcccccCCCCCCEEEccc--ccCcccCCccCCCCCCCCEEEcccCcccc-----------------cC
Q 040849 162 -----------KVPRKLGSLSKLRTLAVHY--NNLSGQIPSSFGNLSSLEVLSASANQFVG-----------------QI 211 (809)
Q Consensus 162 -----------~~p~~l~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~ 211 (809)
..+........++.+.++. |++++ +|..|+++++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 0111112223344444443 77777 77778888888888888888887 48
Q ss_pred ccccc--CCCCccEEEeecCcCCCCcchhccCCCCCceeccCCcc-ccc-ccChhhh------cCCCCCcEEEccCcccc
Q 040849 212 PKTLS--QLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQ-LQG-SLPSDLG------FTLPNLERLNLGENQFT 281 (809)
Q Consensus 212 p~~l~--~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~-l~~-~~p~~~~------~~l~~L~~L~Ls~N~l~ 281 (809)
|..++ ++++|++|+|++|.+.+.+|..+.++++|+.|++++|+ ++| .+|..++ ..+++|+.|++++|.++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 88877 99999999999999999999999999999999999998 888 8887665 13458888888888888
Q ss_pred ccCCc--ccccCCCCceEecCCCcceeeCCCCCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEecccccccc
Q 040849 282 GPIPA--SISNASHLMRLTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGG 359 (809)
Q Consensus 282 ~~~p~--~l~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~ 359 (809)
.+|. .+.++++|+.|++++|.++ .+|.++.+++|+.|+
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~-------------------------------------- 601 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLK-------------------------------------- 601 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEE--------------------------------------
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEE--------------------------------------
Confidence 7777 7888888888888887776 454555444444444
Q ss_pred ccchhhhhccccCcEEEccCCcccccCCccccCCCC-CCeeeCCCccceecCCccccCCCC--CCEEEeeCCeeecccCc
Q 040849 360 MLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVN-LERLLLEGNQFTGRIPGSIGDLHK--LQRLGLQGNKFLGEIPS 436 (809)
Q Consensus 360 ~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~p~ 436 (809)
+++|++. .+|..+..+++ |++|+|++|.++ .+|..+..++. |+.|++++|++.+.+|.
T Consensus 602 -----------------Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~ 662 (876)
T 4ecn_A 602 -----------------LDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRN 662 (876)
T ss_dssp -----------------CCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSS
T ss_pred -----------------CcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCcccc
Confidence 4444444 34444555555 666666666655 45555544433 66666666666555443
Q ss_pred CC---c--CCCCccEEEcccccCcccCCcc-ccCCCCCcEEeCcCCcCccccCcchhcc--------cCCceEEEccCCc
Q 040849 437 SI---G--NLTLLITLSFDKNMLEGSIPSS-LGKCQNLILLGLSNNNLTGTIPTEVIGL--------SSLSIYLDLSQNQ 502 (809)
Q Consensus 437 ~~---~--~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l--------~~l~~~L~Ls~N~ 502 (809)
.. . .+++|+.|++++|.++ .+|.. +..+++|+.|+|++|+++ .+|..+... ++| +.|+|++|+
T Consensus 663 l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L-~~L~Ls~N~ 739 (876)
T 4ecn_A 663 ISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLL-TTIDLRFNK 739 (876)
T ss_dssp CSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGC-CEEECCSSC
T ss_pred chhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCc-cEEECCCCC
Confidence 21 1 2346667777777766 33433 346667777777777776 555544332 256 677777777
Q ss_pred CcccCCCCcc--CCCCCCEEEccccccccccCccccCCCCCCEEeCcC------CccccccchhhcCCCCCCEEeCCCCC
Q 040849 503 LNGTLPSNFG--ILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNG------NFFQGNIPSSFSSLRGIENLDLSRNN 574 (809)
Q Consensus 503 l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~LdLs~N~ 574 (809)
++ .+|..+. .+++|+.|+|++|++++ +|..+.++++|+.|+|++ |++.+.+|..|.++++|+.|+|++|+
T Consensus 740 L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~ 817 (876)
T 4ecn_A 740 LT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSND 817 (876)
T ss_dssp CC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSC
T ss_pred Cc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCC
Confidence 77 5666665 77788888888888876 677777888888887765 88999999999999999999999999
Q ss_pred cccccccccccCCCCCeEEccCCccccc
Q 040849 575 LSGRIPKYFENFLFLQNLNLSFNHFEGE 602 (809)
Q Consensus 575 l~~~~p~~~~~l~~L~~l~ls~N~l~g~ 602 (809)
+ +.+|..+. ++|+.||+++|++...
T Consensus 818 L-~~Ip~~l~--~~L~~LdLs~N~l~~i 842 (876)
T 4ecn_A 818 I-RKVDEKLT--PQLYILDIADNPNISI 842 (876)
T ss_dssp C-CBCCSCCC--SSSCEEECCSCTTCEE
T ss_pred C-CccCHhhc--CCCCEEECCCCCCCcc
Confidence 9 78888776 6999999999998753
No 23
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-46 Score=434.04 Aligned_cols=466 Identities=19% Similarity=0.194 Sum_probs=341.9
Q ss_pred EEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccC
Q 040849 78 TALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFN 157 (809)
Q Consensus 78 ~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 157 (809)
+.++++++++++ +|..+. ++|++|||++|.+++..|..|+++++|++|+|++|.+++..|+.|.++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 678889998886 776664 78999999999999888889999999999999999999888889999999999999999
Q ss_pred CCCCCCcccccCCCCCCEEEcccccCcc-cCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcC--CCC
Q 040849 158 ELVGKVPRKLGSLSKLRTLAVHYNNLSG-QIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKL--SGE 234 (809)
Q Consensus 158 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l--~~~ 234 (809)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++.....+.++ +|+.|++++|.+ ++.
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L-~L~~L~L~~n~l~~~~~ 186 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHL-HLSCILLDLVSYHIKGG 186 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTS-CEEEEEEEESSCCCCSS
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhc-eeeEEEeeccccccccc
Confidence 988 45655 78999999999999986 346789999999999999998876433333333 348999999888 777
Q ss_pred cchhccCCC--CCceeccCCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCCCC
Q 040849 235 IPFSIYNLS--SLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPSFG 312 (809)
Q Consensus 235 ~~~~l~~l~--~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~~ 312 (809)
.|..+..+. .+ .++++.|.+.+.++......+++|+.+++++|+..-. .+.+.++.+.
T Consensus 187 ~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~-------------------~l~~~~~~l~ 246 (562)
T 3a79_B 187 ETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQ-------------------RLMTFLSELT 246 (562)
T ss_dssp SCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHH-------------------HHHHHHHHHH
T ss_pred CcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccc-------------------hHHHHHHHHh
Confidence 777766654 22 3455555555544444333444455555554431000 0111112233
Q ss_pred CCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccc--
Q 040849 313 NLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGL-- 390 (809)
Q Consensus 313 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l-- 390 (809)
.+++|+.++++.+.+.+ +.+.+. +.... ..+|++|++++|+++|.+|..+
T Consensus 247 ~l~~L~~L~L~~~~l~~-------------------------~~~~~~-~~~~~--~~~L~~L~l~~n~l~~~ip~~~~~ 298 (562)
T 3a79_B 247 RGPTLLNVTLQHIETTW-------------------------KCSVKL-FQFFW--PRPVEYLNIYNLTITERIDREEFT 298 (562)
T ss_dssp SCSSCEEEEEEEEEECH-------------------------HHHHHH-HHHHT--TSSEEEEEEEEEEECSCCCCCCCC
T ss_pred ccCcceEEEecCCcCcH-------------------------HHHHHH-HHhhh--cccccEEEEeccEeeccccchhhh
Confidence 34444444444443321 111111 11111 1258888888888887777776
Q ss_pred ---cCCCCCCeeeCCCccceecCC-ccccC---CCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCcccc
Q 040849 391 ---RNLVNLERLLLEGNQFTGRIP-GSIGD---LHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLG 463 (809)
Q Consensus 391 ---~~l~~L~~L~Ls~N~l~~~~p-~~~~~---l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 463 (809)
.+++.|+.++++.|.+ .+| ..+.. ..+|++|++++|.+.... ....+++|++|++++|++++..|..+.
T Consensus 299 ~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~ 374 (562)
T 3a79_B 299 YSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCS 374 (562)
T ss_dssp CCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCC
T ss_pred cccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhc
Confidence 6666666666666666 334 22221 257899999999875332 126788899999999999988888999
Q ss_pred CCCCCcEEeCcCCcCcc--ccCcchhcccCCceEEEccCCcCcccCC-CCccCCCCCCEEEccccccccccCccccCCCC
Q 040849 464 KCQNLILLGLSNNNLTG--TIPTEVIGLSSLSIYLDLSQNQLNGTLP-SNFGILKNLGVLDVSENKLSGEIPNSLGSCVR 540 (809)
Q Consensus 464 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~l~~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 540 (809)
++++|++|++++|++++ .+|..+.+++++ +.|++++|++++.+| ..+..+++|++|++++|++++.+|..+. ++
T Consensus 375 ~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L-~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~ 451 (562)
T 3a79_B 375 TLKRLQTLILQRNGLKNFFKVALMTKNMSSL-ETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PK 451 (562)
T ss_dssp SCSSCCEEECCSSCCCBTTHHHHTTTTCTTC-CEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TT
T ss_pred ccCCCCEEECCCCCcCCcccchhhhcCCCCC-CEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--Cc
Confidence 99999999999999986 345678888888 789999999998455 4588899999999999999988887765 78
Q ss_pred CCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCCC
Q 040849 541 LEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIK 606 (809)
Q Consensus 541 L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~ 606 (809)
|++|+|++|+++ .+|..+.++++|+.|||++|++++..+..|..+++|+.|++++|+++|.+|..
T Consensus 452 L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 452 VKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp CSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred CCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchH
Confidence 999999999999 67777779999999999999999544444999999999999999999877643
No 24
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.2e-44 Score=384.32 Aligned_cols=293 Identities=29% Similarity=0.534 Sum_probs=277.9
Q ss_pred CCCHHHHHHHHHHHHhcCCCCccccCCCCCCCCCCc--ccccccCCCC--CcEEEEECCCCCCcc--ccCccccCCCCcc
Q 040849 29 KSNETDQLALLEFKAKVTHDPLEVLSSWNYSRHFCQ--WKGVTCSPRH--QRVTALLLPSLLLQG--SLSPHIGNLSFLR 102 (809)
Q Consensus 29 ~~~~~~~~~ll~~k~~~~~~~~~~l~~W~~~~~~c~--w~gv~c~~~~--~~v~~l~l~~~~l~g--~~~~~l~~l~~L~ 102 (809)
.|.++|++||++||+++. ||. .+++|+.++|||. |.||.|+..+ ++|+.|+|+++.++| .+|+.++++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 589999999999999996 776 7899988889999 9999998655 899999999999999 9999999999999
Q ss_pred EEeCCC-CCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccc
Q 040849 103 VLDLKN-NSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYN 181 (809)
Q Consensus 103 ~LdLs~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 181 (809)
+|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|.+++.+|..+..+++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCccCCCCC-CCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCceeccCCcccccccC
Q 040849 182 NLSGQIPSSFGNLS-SLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQLQGSLP 260 (809)
Q Consensus 182 ~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p 260 (809)
++++.+|..+..++ +|++|++++|++++.+|..+..++ |+.|++++|.+++..|..+..+++|+.|++++|.+++.+|
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 238 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG 238 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecC
Confidence 99999999999998 999999999999999999999998 9999999999999999999999999999999999997777
Q ss_pred hhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCCCCCCCCCcEEEecccc
Q 040849 261 SDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPSFGNLHKLQWVSISMNH 326 (809)
Q Consensus 261 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~ 326 (809)
. +. .+++|++|++++|++++.+|..+..+++|+.|++++|.+++.+|....+++|+.+++++|.
T Consensus 239 ~-~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 239 K-VG-LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp G-CC-CCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSS
T ss_pred c-cc-ccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCC
Confidence 6 43 6899999999999999999999999999999999999999999998888999988888887
No 25
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-43 Score=409.18 Aligned_cols=459 Identities=20% Similarity=0.218 Sum_probs=336.7
Q ss_pred CCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEE
Q 040849 98 LSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLA 177 (809)
Q Consensus 98 l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 177 (809)
+...+++|+++|++++ +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 30 ~~~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 106 (562)
T 3a79_B 30 NELESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLD 106 (562)
T ss_dssp ---CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEE
Confidence 3345889999999985 676554 7888899999988877778888888888888888888888888888888888888
Q ss_pred cccccCcccCCccCCCCCCCCEEEcccCccccc-CcccccCCCCccEEEeecCcCCCCcchhccCCCCCceeccCCcccc
Q 040849 178 VHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQ-IPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQLQ 256 (809)
Q Consensus 178 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 256 (809)
|++|+++ .+|.. .+++|++|++++|++++. +|..|+++++|++|++++|.+++. .+..+++|
T Consensus 107 Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L----------- 169 (562)
T 3a79_B 107 VSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHL----------- 169 (562)
T ss_dssp CTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTS-----------
T ss_pred CCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhc-----------
Confidence 8888888 45655 788888888888888763 457788888888888888877642 22222222
Q ss_pred cccChhhhcCCCCCcEEEccCccc--cccCCcccccCC-CCceEecCCCcceeeCCC--CCCCCCCcEEEeccccCCCCC
Q 040849 257 GSLPSDLGFTLPNLERLNLGENQF--TGPIPASISNAS-HLMRLTIPINGFSGKVPS--FGNLHKLQWVSISMNHLGNGE 331 (809)
Q Consensus 257 ~~~p~~~~~~l~~L~~L~Ls~N~l--~~~~p~~l~~l~-~L~~L~l~~n~l~~~~~~--~~~l~~L~~L~Ls~n~l~~~~ 331 (809)
+|+.|++++|.+ ++..|..+..+. ....++++.|.+.+.++. +..+++|+.++++.|......
T Consensus 170 ------------~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 237 (562)
T 3a79_B 170 ------------HLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQR 237 (562)
T ss_dssp ------------CEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHH
T ss_pred ------------eeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccch
Confidence 225555555555 555555554433 111345566666554443 556667777777766421000
Q ss_pred CCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCccccc----CCccccCCCCCCeeeCCCccce
Q 040849 332 KDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGN----IPSGLRNLVNLERLLLEGNQFT 407 (809)
Q Consensus 332 ~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 407 (809)
.......+..++. |+.++++++.+.+. ++.. ...++|++|++++|.++
T Consensus 238 --l~~~~~~l~~l~~-------------------------L~~L~L~~~~l~~~~~~~~~~~-~~~~~L~~L~l~~n~l~ 289 (562)
T 3a79_B 238 --LMTFLSELTRGPT-------------------------LLNVTLQHIETTWKCSVKLFQF-FWPRPVEYLNIYNLTIT 289 (562)
T ss_dssp --HHHHHHHHHSCSS-------------------------CEEEEEEEEEECHHHHHHHHHH-HTTSSEEEEEEEEEEEC
T ss_pred --HHHHHHHHhccCc-------------------------ceEEEecCCcCcHHHHHHHHHh-hhcccccEEEEeccEee
Confidence 0001112222233 55555555554432 1222 23459999999999999
Q ss_pred ecCCccc-----cCCCCCCEEEeeCCeeecccC-cCCcC---CCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcC
Q 040849 408 GRIPGSI-----GDLHKLQRLGLQGNKFLGEIP-SSIGN---LTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNL 478 (809)
Q Consensus 408 ~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~---l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 478 (809)
|.+|..+ ..++.|+.++++.|.+ .+| ..+.. ..+|++|++++|.+.... ....+++|++|++++|++
T Consensus 290 ~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l 365 (562)
T 3a79_B 290 ERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVF 365 (562)
T ss_dssp SCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCC
T ss_pred ccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCcc
Confidence 9999877 6777777777777776 344 22222 257999999999986432 226889999999999999
Q ss_pred ccccCcchhcccCCceEEEccCCcCccc--CCCCccCCCCCCEEEccccccccccCc-cccCCCCCCEEeCcCCcccccc
Q 040849 479 TGTIPTEVIGLSSLSIYLDLSQNQLNGT--LPSNFGILKNLGVLDVSENKLSGEIPN-SLGSCVRLEQLGMNGNFFQGNI 555 (809)
Q Consensus 479 ~~~~p~~~~~l~~l~~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~ 555 (809)
++.+|..+.+++++ +.|++++|++++. +|..+..+++|++|++++|++++.+|. .+..+++|++|++++|++++.+
T Consensus 366 ~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 444 (562)
T 3a79_B 366 TDSVFQGCSTLKRL-QTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV 444 (562)
T ss_dssp CTTTTTTCCSCSSC-CEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGG
T ss_pred ccchhhhhcccCCC-CEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcch
Confidence 99899999999999 8999999999974 457799999999999999999985665 5889999999999999999888
Q ss_pred chhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCCC--CCCCCCCcccccCCCCCCC
Q 040849 556 PSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIK--GVFSNSSAVSLDGNDNLCG 625 (809)
Q Consensus 556 p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~--~~~~~~~~~~~~~n~~lc~ 625 (809)
|..+. ++|+.|||++|+++ .+|..+..+++|++|++++|++++ +|.. ..+..+...++.+|+..|.
T Consensus 445 ~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 445 FRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp GSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred hhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCC
Confidence 87665 79999999999999 677777799999999999999994 5543 4566777888999998875
No 26
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.5e-43 Score=394.53 Aligned_cols=408 Identities=23% Similarity=0.272 Sum_probs=195.9
Q ss_pred ccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCC
Q 040849 93 PHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSK 172 (809)
Q Consensus 93 ~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 172 (809)
|.-...++|++|++++|.+ |.+|.+++++++|++|++++|.+.|.+|..++++++|+.++++.|.. .+
T Consensus 5 p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~ 72 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQ 72 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HT
T ss_pred ccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cC
Confidence 3334567888888888888 68888888888888888888888888888888888764444433321 23
Q ss_pred CCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCceeccCC
Q 040849 173 LRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPV 252 (809)
Q Consensus 173 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~ 252 (809)
+++|++++|++++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++++.. .. .++|++|++++
T Consensus 73 l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~-~~---~~~L~~L~L~~ 140 (454)
T 1jl5_A 73 AHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALS-DL---PPLLEYLGVSN 140 (454)
T ss_dssp CSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCC-SC---CTTCCEEECCS
T ss_pred CCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCccc-CC---CCCCCEEECcC
Confidence 4444444444442 2221 1344444444444443 2221 133444444444443211 00 03344444444
Q ss_pred cccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCCCCCCCCCcEEEeccccCCCCCC
Q 040849 253 NQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNGEK 332 (809)
Q Consensus 253 n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 332 (809)
|++++ +| .+. .+++|++|++++|++++ +|..+ .+|+.|++++|.+++ +|.+..+++|+.|++++|.+++..
T Consensus 141 n~l~~-lp-~~~-~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~~~~~l~~L~~L~l~~N~l~~l~- 211 (454)
T 1jl5_A 141 NQLEK-LP-ELQ-NSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LPELQNLPFLTAIYADNNSLKKLP- 211 (454)
T ss_dssp SCCSS-CC-CCT-TCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCSSCC-
T ss_pred CCCCC-Cc-ccC-CCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-CccccCCCCCCEEECCCCcCCcCC-
Confidence 44442 33 222 44445555555554443 23221 245555555555544 234555555555555555544321
Q ss_pred CchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCc
Q 040849 333 DDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPG 412 (809)
Q Consensus 333 ~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 412 (809)
.. +.+|++|++++|++. .+| .+..+++|++|++++|++++ +|.
T Consensus 212 ------------------------------~~----~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~ 254 (454)
T 1jl5_A 212 ------------------------------DL----PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPD 254 (454)
T ss_dssp ------------------------------CC----CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCS
T ss_pred ------------------------------CC----cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-ccc
Confidence 10 123777777777776 455 37777777888888777774 343
Q ss_pred cccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCC
Q 040849 413 SIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSL 492 (809)
Q Consensus 413 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l 492 (809)
. .++|++|++++|++++ +|.. +++|++|++++|++++. |.. .++|++|++++|++++ ++.. .+++
T Consensus 255 ~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~~~---~~~L 319 (454)
T 1jl5_A 255 L---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LCDL---PPSL 319 (454)
T ss_dssp C---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-ECCC---CTTC
T ss_pred c---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-ccCC---cCcC
Confidence 2 3677788888887775 4433 36777788888877763 111 1577788888887774 2211 1345
Q ss_pred ceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCcccc--ccchhhcCCCCCCEEeC
Q 040849 493 SIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQG--NIPSSFSSLRGIENLDL 570 (809)
Q Consensus 493 ~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~LdL 570 (809)
+.|++++|++++ +|.. +++|++|++++|+++ .+|. .+++|++|++++|++++ .+|.++..+
T Consensus 320 -~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L-------- 382 (454)
T 1jl5_A 320 -EELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL-------- 382 (454)
T ss_dssp -CEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------
T ss_pred -CEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------
Confidence 677888888775 4443 467788888888887 4555 36778888888888887 666655432
Q ss_pred CCCCcccccccccccCCCCCeEEccCCcccc--cCCC
Q 040849 571 SRNNLSGRIPKYFENFLFLQNLNLSFNHFEG--EVPI 605 (809)
Q Consensus 571 s~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g--~~p~ 605 (809)
+.|++.|.+|.. +++|++|++++|+++| .+|.
T Consensus 383 ~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 383 RMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp ECCC---------------------------------
T ss_pred hhcccccccccc---cCcCCEEECCCCcCCccccchh
Confidence 346666666653 3667777777777776 5553
No 27
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.7e-42 Score=389.23 Aligned_cols=394 Identities=19% Similarity=0.191 Sum_probs=251.8
Q ss_pred cEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCC-cccccCCCCCCEEEccc
Q 040849 102 RVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKV-PRKLGSLSKLRTLAVHY 180 (809)
Q Consensus 102 ~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~Ls~ 180 (809)
+.++.++++++ .+|. +. ++|++|+|++|.+++..|..|.++++|++|+|++|.+.+.+ +..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 46777777776 4454 22 67888888888887777777888888888888888776444 45677777777777777
Q ss_pred ccCcccCCccCCCCCCCCEEEcccCcccccCccc--ccCCCCccEEEeecCcCCCCcchh-ccCCCCCceeccCCccccc
Q 040849 181 NNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKT--LSQLKRMRFIGFGVNKLSGEIPFS-IYNLSSLNYFEFPVNQLQG 257 (809)
Q Consensus 181 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--l~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~l~~n~l~~ 257 (809)
|++++..|..|+++++|++|++++|++++..|.. |..+++|++|++++|.+++..|.. +.
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~----------------- 151 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFL----------------- 151 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGG-----------------
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccC-----------------
Confidence 7777777777777777777777777776644443 666666666666666655444433 33
Q ss_pred ccChhhhcCCCCCcEEEccCccccccCCcccccC--CCCceEecCCCcceeeCCCCCCCCCCcEEEeccccCCCCCCCch
Q 040849 258 SLPSDLGFTLPNLERLNLGENQFTGPIPASISNA--SHLMRLTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNGEKDDL 335 (809)
Q Consensus 258 ~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l--~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 335 (809)
.+++|++|++++|++++..|..+..+ .+|+.|++++| .+.+.....+
T Consensus 152 --------~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n-----------------------~l~~~~~~~~ 200 (455)
T 3v47_A 152 --------NMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSI-----------------------TLQDMNEYWL 200 (455)
T ss_dssp --------GCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTC-----------------------BCTTCSTTCT
T ss_pred --------CCCcccEEeCCCCcccccChhhhhccccccccccccccC-----------------------cccccchhhc
Confidence 44555555555555554444444332 22333333333 2222111100
Q ss_pred hhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCcccc
Q 040849 336 EFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIG 415 (809)
Q Consensus 336 ~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 415 (809)
.. .....+... ++|+.|++++|++.+..|..+... .
T Consensus 201 ~~----------------------~~~~~~~~~-~~L~~L~Ls~n~l~~~~~~~~~~~---------------------~ 236 (455)
T 3v47_A 201 GW----------------------EKCGNPFKN-TSITTLDLSGNGFKESMAKRFFDA---------------------I 236 (455)
T ss_dssp TH----------------------HHHCCTTTT-CEEEEEECTTSCCCHHHHHHHHHH---------------------T
T ss_pred cc----------------------ccccccccc-ceeeeEecCCCcccccchhhhhcc---------------------c
Confidence 00 000000011 125556666666655555444332 0
Q ss_pred CCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccC--CCCCcEEeCcCCcCccccCcchhcccCCc
Q 040849 416 DLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGK--CQNLILLGLSNNNLTGTIPTEVIGLSSLS 493 (809)
Q Consensus 416 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~ 493 (809)
..++|+.|++++|.+.+.. +..+.+.+..+..+.. .++|+.|++++|++++..|..+..+++|
T Consensus 237 ~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L- 301 (455)
T 3v47_A 237 AGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDL- 301 (455)
T ss_dssp TTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTC-
T ss_pred cccceeeEeeccccccccc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCC-
Confidence 1134444444444332211 0111111111222222 2567777777777776667777777777
Q ss_pred eEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCC
Q 040849 494 IYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRN 573 (809)
Q Consensus 494 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N 573 (809)
+.|++++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|||++|
T Consensus 302 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 381 (455)
T 3v47_A 302 EQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTN 381 (455)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCC
Confidence 67777777777777778888888999999999998888888899999999999999999888999999999999999999
Q ss_pred CcccccccccccCCCCCeEEccCCcccccCCCC
Q 040849 574 NLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIK 606 (809)
Q Consensus 574 ~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~ 606 (809)
++++..+..|..+++|++|++++|+++|.+|..
T Consensus 382 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 382 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred ccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 999888888889999999999999999988853
No 28
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.5e-42 Score=389.67 Aligned_cols=367 Identities=21% Similarity=0.260 Sum_probs=248.2
Q ss_pred CCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccC-CccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEE
Q 040849 99 SFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQI-PDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLA 177 (809)
Q Consensus 99 ~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 177 (809)
++|++|||++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 68899999999999888889999999999999999987655 56789999999999999999888888999999999999
Q ss_pred cccccCcccCCcc--CCCCCCCCEEEcccCcccccCccc-ccCCCCccEEEeecCcCCCCcchhccCC--CCCceeccCC
Q 040849 178 VHYNNLSGQIPSS--FGNLSSLEVLSASANQFVGQIPKT-LSQLKRMRFIGFGVNKLSGEIPFSIYNL--SSLNYFEFPV 252 (809)
Q Consensus 178 Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~L~~n~l~~~~~~~l~~l--~~L~~L~l~~ 252 (809)
|++|++++..|.. |.++++|++|++++|++++..|.. +.++++|++|++++|.+++..+..+..+ .+|+.|+++.
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999998755554 889999999999999999887776 7889999999999999998888887766 6778888888
Q ss_pred cccccccChhhh-------cCCCCCcEEEccCccccccCCcccccC---CCCceEecCCCcceeeCCCCCCCCCCcEEEe
Q 040849 253 NQLQGSLPSDLG-------FTLPNLERLNLGENQFTGPIPASISNA---SHLMRLTIPINGFSGKVPSFGNLHKLQWVSI 322 (809)
Q Consensus 253 n~l~~~~p~~~~-------~~l~~L~~L~Ls~N~l~~~~p~~l~~l---~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L 322 (809)
|.+.+..+..+. ..+++|++|++++|++++..|..+... ++|+.|++++|...+.....
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~----------- 258 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGH----------- 258 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTC-----------
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccch-----------
Confidence 887743332211 134667777777777776666655443 45555555555433211100
Q ss_pred ccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCC
Q 040849 323 SMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLE 402 (809)
Q Consensus 323 s~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls 402 (809)
+. +.+..+..+..+ ..++|++|+++
T Consensus 259 --~~------------------------------~~~~~~~~~~~~-----------------------~~~~L~~L~l~ 283 (455)
T 3v47_A 259 --TN------------------------------FKDPDNFTFKGL-----------------------EASGVKTCDLS 283 (455)
T ss_dssp --CS------------------------------SCCCCTTTTGGG-----------------------TTSCCCEEECC
T ss_pred --hh------------------------------hccCcccccccc-----------------------cccCceEEEec
Confidence 00 000000000000 12345555555
Q ss_pred CccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCcccc
Q 040849 403 GNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTI 482 (809)
Q Consensus 403 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 482 (809)
+|.+++..|..+..+++|++|++++|++.+..|..|.++++|++|++++|.+++..|..+..+++|++|+|++|++++..
T Consensus 284 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 363 (455)
T 3v47_A 284 KSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALG 363 (455)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEEC
T ss_pred CccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccC
Confidence 55555555555555555555555555555555555555555555555555555555555555566666666666665555
Q ss_pred CcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccC
Q 040849 483 PTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIP 532 (809)
Q Consensus 483 p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 532 (809)
|..+.++++| ++|++++|++++..+..+..+++|++|+|++|.+++..|
T Consensus 364 ~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 364 DQSFLGLPNL-KELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTTTTTCTTC-CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred hhhccccccc-cEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 5556666666 566666666665555566777778888888888877666
No 29
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.7e-41 Score=378.03 Aligned_cols=419 Identities=23% Similarity=0.263 Sum_probs=202.3
Q ss_pred CcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEc
Q 040849 75 QRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRL 154 (809)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 154 (809)
.+++.++++++.+ |.+|++++++++|++|++++|.++|.+|.+++++++|+.+++++|.. .++++|++
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~l 78 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELEL 78 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEEC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEEe
Confidence 5788899999999 89999999999999999999999999999999999886655554432 34556666
Q ss_pred ccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCC
Q 040849 155 GFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGE 234 (809)
Q Consensus 155 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 234 (809)
++|.+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++++. |.. .++|++|++++|++++
T Consensus 79 ~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~- 145 (454)
T 1jl5_A 79 NNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK- 145 (454)
T ss_dssp TTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-
T ss_pred cCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-
Confidence 6666553 2221 2456666666666654 4432 25566666666655532 111 1456666666666654
Q ss_pred cchhccCCCCCceeccCCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCCCCCC
Q 040849 235 IPFSIYNLSSLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPSFGNL 314 (809)
Q Consensus 235 ~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~~~l 314 (809)
+| .+.++++|++|++++|++++ +|.. .++|++|++++|++++ +| .+..+++|+.|++++|.+++ +|.. .
T Consensus 146 lp-~~~~l~~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~--~ 214 (454)
T 1jl5_A 146 LP-ELQNSSFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL--P 214 (454)
T ss_dssp CC-CCTTCTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC--C
T ss_pred Cc-ccCCCCCCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC--c
Confidence 44 35666666666666666653 4432 2466677777776665 44 46666777777777776665 2221 1
Q ss_pred CCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCC
Q 040849 315 HKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLV 394 (809)
Q Consensus 315 ~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~ 394 (809)
++|+.|++++|.++... .+..+++ |++|++++|++++ +|.. ++
T Consensus 215 ~~L~~L~l~~n~l~~lp--------~~~~l~~-------------------------L~~L~l~~N~l~~-l~~~---~~ 257 (454)
T 1jl5_A 215 LSLESIVAGNNILEELP--------ELQNLPF-------------------------LTTIYADNNLLKT-LPDL---PP 257 (454)
T ss_dssp TTCCEEECCSSCCSSCC--------CCTTCTT-------------------------CCEEECCSSCCSS-CCSC---CT
T ss_pred CcccEEECcCCcCCccc--------ccCCCCC-------------------------CCEEECCCCcCCc-cccc---cc
Confidence 36666666666655221 1223333 4444444444432 2221 24
Q ss_pred CCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCC-CCCcEEeC
Q 040849 395 NLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKC-QNLILLGL 473 (809)
Q Consensus 395 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~L 473 (809)
+|++|++++|++++ +|.. .++|++|++++|++++. |.. .++|++|++++|++++. + .+ ++|++|++
T Consensus 258 ~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~L 324 (454)
T 1jl5_A 258 SLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSL-C----DLPPSLEELNV 324 (454)
T ss_dssp TCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEE-C----CCCTTCCEEEC
T ss_pred ccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcc-c----CCcCcCCEEEC
Confidence 45555555555553 3322 24556666666655542 111 14566666666666542 1 12 36777777
Q ss_pred cCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEcccccccc--ccCccccCCCCCCEEeCcCCcc
Q 040849 474 SNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSG--EIPNSLGSCVRLEQLGMNGNFF 551 (809)
Q Consensus 474 s~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l 551 (809)
++|++++ +|.. ++++ +.|++++|++++ +|. .+++|++|++++|++++ .+|.+++. |+.|.+
T Consensus 325 s~N~l~~-lp~~---~~~L-~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~ 387 (454)
T 1jl5_A 325 SNNKLIE-LPAL---PPRL-ERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSH 387 (454)
T ss_dssp CSSCCSC-CCCC---CTTC-CEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-
T ss_pred CCCcccc-cccc---CCcC-CEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhccc
Confidence 7777764 5543 3555 677777777774 454 36788888888888887 66766543 345777
Q ss_pred ccccchhhcCCCCCCEEeCCCCCccc--ccccccccCCCCCeEEccCCcccccCCC
Q 040849 552 QGNIPSSFSSLRGIENLDLSRNNLSG--RIPKYFENFLFLQNLNLSFNHFEGEVPI 605 (809)
Q Consensus 552 ~~~~p~~~~~l~~L~~LdLs~N~l~~--~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 605 (809)
.|.+|.. +++|+.||+++|++++ .+|.+ ++.|.+++|.+.+.+|.
T Consensus 388 ~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 388 LAEVPEL---PQNLKQLHVETNPLREFPDIPES------VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp --------------------------------------------------------
T ss_pred ccccccc---cCcCCEEECCCCcCCccccchhh------HhheeCcCcccCCcccc
Confidence 7777764 4688899999999987 66644 56677888888887764
No 30
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4e-40 Score=367.26 Aligned_cols=360 Identities=19% Similarity=0.195 Sum_probs=264.3
Q ss_pred CccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCC
Q 040849 92 SPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLS 171 (809)
Q Consensus 92 ~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 171 (809)
+..++++++|++|||++|.+++. | .++.+++|++|+|++|.+++. | ++.+++|++|++++|.+++. | ++.++
T Consensus 35 ~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~ 106 (457)
T 3bz5_A 35 TISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLT 106 (457)
T ss_dssp EEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCT
T ss_pred ccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCC
Confidence 44567788888888888888864 5 688888888888888888864 3 78888888888888888764 3 78888
Q ss_pred CCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCceeccC
Q 040849 172 KLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFP 251 (809)
Q Consensus 172 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 251 (809)
+|++|++++|++++ +| ++.+++|++|++++|++++. .++.+++|++|++++|...+.+ .+..+++|++|+++
T Consensus 107 ~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls 178 (457)
T 3bz5_A 107 KLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCS 178 (457)
T ss_dssp TCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECC
T ss_pred cCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECC
Confidence 88888888888886 33 78888888888888888874 2778888888888888655555 46778888888888
Q ss_pred CcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCCCCCCCCCcEEEeccccCCCCC
Q 040849 252 VNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNGE 331 (809)
Q Consensus 252 ~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 331 (809)
+|++++ +| +. .+++|+.|++++|++++. .+..+++|+.|++++|++++ +| +..+++|+.|++++|.+++..
T Consensus 179 ~n~l~~-l~--l~-~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip-~~~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 179 FNKITE-LD--VS-QNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID-VTPLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp SSCCCC-CC--CT-TCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC-CTTCTTCSEEECCSSCCSCCC
T ss_pred CCccce-ec--cc-cCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC-ccccCCCCEEEeeCCcCCCcC
Confidence 888875 55 33 678888888888888865 37778888888888888887 44 778888888888888887643
Q ss_pred CCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCC
Q 040849 332 KDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIP 411 (809)
Q Consensus 332 ~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 411 (809)
...+++|+.++++.| +|+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|
T Consensus 250 ---------~~~l~~L~~L~l~~n---------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 250 ---------VSTLSKLTTLHCIQT---------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLD 303 (457)
T ss_dssp ---------CTTCTTCCEEECTTC---------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEE
T ss_pred ---------HHHCCCCCEEeccCC---------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceec
Confidence 234566777776654 26777788887777666 4677888888888887776666
Q ss_pred ccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccC
Q 040849 412 GSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSS 491 (809)
Q Consensus 412 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 491 (809)
. ..++|+.|++++| ++|++|++++|++++. .+.++++|+.||+++|++++ + +.
T Consensus 304 ~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~-l-------~~ 356 (457)
T 3bz5_A 304 C---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQD-F-------SS 356 (457)
T ss_dssp C---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCB-C-------TT
T ss_pred c---CCCcceEechhhc-------------ccCCEEECCCCccccc---ccccCCcCcEEECCCCCCCC-c-------cc
Confidence 4 3455565555544 5677788888888764 27777778888888887774 1 23
Q ss_pred CceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccc
Q 040849 492 LSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSL 535 (809)
Q Consensus 492 l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 535 (809)
+ ..|++++|+++|. +.+..|+.+++++|+++|.+|..+
T Consensus 357 L-~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~ 394 (457)
T 3bz5_A 357 V-GKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDL 394 (457)
T ss_dssp G-GGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTC
T ss_pred c-ccccccCCcEEec-----ceeeecCccccccCcEEEEcChhH
Confidence 3 3456677777665 244556666777777777776654
No 31
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.8e-39 Score=362.04 Aligned_cols=366 Identities=18% Similarity=0.182 Sum_probs=257.9
Q ss_pred CCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcccCC
Q 040849 109 NSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIP 188 (809)
Q Consensus 109 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 188 (809)
....+..+..++++++|++|++++|.+++. | .+..+++|++|+|++|.+++. | ++.+++|++|++++|++++. +
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~ 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C
T ss_pred cCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e
Confidence 344556667788899999999999998864 5 688889999999999998874 3 88888999999999988864 3
Q ss_pred ccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCceeccCCcccccccChhhhcCCC
Q 040849 189 SSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQLQGSLPSDLGFTLP 268 (809)
Q Consensus 189 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~ 268 (809)
++++++|++|++++|++++. | ++.+++|++|++++|++++. .+..+++|++|+++.|+..+.++ +. .++
T Consensus 102 --~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~~--~~-~l~ 170 (457)
T 3bz5_A 102 --VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLD--VT-PQT 170 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCCC--CT-TCT
T ss_pred --cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCcccccc--cc-cCC
Confidence 88888889999988888864 3 77888888888888888764 25566666666666664444442 22 455
Q ss_pred CCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCCCCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCcc
Q 040849 269 NLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLE 348 (809)
Q Consensus 269 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~ 348 (809)
+|+.|++++|++++ +| +..+++|+.|+++.|.+++.. +..
T Consensus 171 ~L~~L~ls~n~l~~-l~-------------------------l~~l~~L~~L~l~~N~l~~~~---------l~~----- 210 (457)
T 3bz5_A 171 QLTTLDCSFNKITE-LD-------------------------VSQNKLLNRLNCDTNNITKLD---------LNQ----- 210 (457)
T ss_dssp TCCEEECCSSCCCC-CC-------------------------CTTCTTCCEEECCSSCCSCCC---------CTT-----
T ss_pred cCCEEECCCCccce-ec-------------------------cccCCCCCEEECcCCcCCeec---------ccc-----
Confidence 55555555555543 22 344444445555444444320 111
Q ss_pred EEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCC
Q 040849 349 LLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGN 428 (809)
Q Consensus 349 ~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 428 (809)
+ ++|+.|++++|++++ +| +..+++|++|++++|++++.. +..+++|+.|++++|
T Consensus 211 -------------------l-~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n 264 (457)
T 3bz5_A 211 -------------------N-IQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT 264 (457)
T ss_dssp -------------------C-TTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC
T ss_pred -------------------C-CCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC
Confidence 1 236666666666665 34 667777788888888777643 445677777777765
Q ss_pred eeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCC
Q 040849 429 KFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLP 508 (809)
Q Consensus 429 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p 508 (809)
+|+.|++++|.+.+.+| +..+++|+.|++++|+..+.+|... ..+ +.|++++
T Consensus 265 --------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~---~~L-~~L~l~~-------- 316 (457)
T 3bz5_A 265 --------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQA---AGI-TELDLSQ-------- 316 (457)
T ss_dssp --------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTT---CCC-SCCCCTT--------
T ss_pred --------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCC---Ccc-eEechhh--------
Confidence 34566777887777666 4677888888888888877776432 333 3344443
Q ss_pred CCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCC
Q 040849 509 SNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLF 588 (809)
Q Consensus 509 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~ 588 (809)
+++|++|++++|++++. + ++++++|+.|++++|++++ ++.|..|++++|+++|. ..+..
T Consensus 317 -----~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~ 375 (457)
T 3bz5_A 317 -----NPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTIT 375 (457)
T ss_dssp -----CTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEE
T ss_pred -----cccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeee
Confidence 46889999999999874 3 8889999999999999986 24567778999999887 35566
Q ss_pred CCeEEccCCcccccCCCC
Q 040849 589 LQNLNLSFNHFEGEVPIK 606 (809)
Q Consensus 589 L~~l~ls~N~l~g~~p~~ 606 (809)
|..+++++|+|+|.||..
T Consensus 376 l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 376 MPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp CCCBCCBTTBEEEECCTT
T ss_pred cCccccccCcEEEEcChh
Confidence 888899999999999864
No 32
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=6.4e-38 Score=352.42 Aligned_cols=121 Identities=24% Similarity=0.399 Sum_probs=73.4
Q ss_pred CCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEE
Q 040849 97 NLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTL 176 (809)
Q Consensus 97 ~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 176 (809)
.+++|+.|+++++.++. +| .+..+++|++|+|++|.+++..| +.++++|++|++++|.+.+..+ +..+++|++|
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 34566677777776653 33 36666666666776666664433 6666666666666666664433 6666666666
Q ss_pred EcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEee
Q 040849 177 AVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFG 227 (809)
Q Consensus 177 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 227 (809)
++++|++++..+ +.++++|++|++++|.+++. + .+..+++|+.|+++
T Consensus 118 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~ 164 (466)
T 1o6v_A 118 TLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG 164 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE
T ss_pred ECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC
Confidence 666666664322 66666666666666666542 2 35556666666554
No 33
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.4e-37 Score=349.61 Aligned_cols=144 Identities=27% Similarity=0.390 Sum_probs=87.5
Q ss_pred cEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcc
Q 040849 76 RVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLG 155 (809)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 155 (809)
+++.+++.++.+.. +| .+..+++|++|||++|.+++..| ++++++|++|++++|.+++..| +.++++|++|+++
T Consensus 47 ~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~ 120 (466)
T 1o6v_A 47 QVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLF 120 (466)
T ss_dssp TCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred cccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECC
Confidence 45666666666554 33 35666677777777776665433 6666777777777776665443 6666777777777
Q ss_pred cCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCC
Q 040849 156 FNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLS 232 (809)
Q Consensus 156 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~ 232 (809)
+|.+++..+ +..+++|++|++++|.+++ ++ .+..+++|++|+++ |.+.+.. .+.++++|+.|++++|.++
T Consensus 121 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 121 NNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVS 190 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred CCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCC
Confidence 776665432 6666777777777776664 22 36666677777664 3343322 2555666666666655554
No 34
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.8e-38 Score=352.92 Aligned_cols=346 Identities=19% Similarity=0.209 Sum_probs=281.3
Q ss_pred eeccCCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCC-CCCCCCCcEEEeccc
Q 040849 247 YFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPS-FGNLHKLQWVSISMN 325 (809)
Q Consensus 247 ~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~Ls~n 325 (809)
.++.+.++++ .+|..+ .++++.|+|++|++++..+..|.++++|++|++++|.+++..|. |.++++|++|++++|
T Consensus 15 ~v~c~~~~l~-~ip~~~---~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGI---PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCC---CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 3444445554 556543 25678888888888877777788888888888888888777665 777777777777777
Q ss_pred cCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCcc
Q 040849 326 HLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQ 405 (809)
Q Consensus 326 ~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 405 (809)
.++..... .+..+ ++|++|++++|++.+..|..|.++++|++|++++|.
T Consensus 91 ~l~~~~~~------------------------------~~~~l-~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~ 139 (477)
T 2id5_A 91 RLKLIPLG------------------------------VFTGL-SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDND 139 (477)
T ss_dssp CCCSCCTT------------------------------SSTTC-TTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTT
T ss_pred cCCccCcc------------------------------cccCC-CCCCEEECCCCccccCChhHccccccCCEEECCCCc
Confidence 77654321 12222 247888888888888888888889999999999999
Q ss_pred ceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcc
Q 040849 406 FTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTE 485 (809)
Q Consensus 406 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 485 (809)
+++..+..|.++++|+.|++++|++++..+..+.++++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+.+|..
T Consensus 140 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~ 219 (477)
T 2id5_A 140 LVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPN 219 (477)
T ss_dssp CCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTT
T ss_pred cceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcc
Confidence 98888888999999999999999998777777888999999999999999888888999999999999999888888887
Q ss_pred hhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCC
Q 040849 486 VIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGI 565 (809)
Q Consensus 486 ~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 565 (809)
.....+| +.|++++|++++..+..+..+++|+.|+|++|++++..+..|.++++|+.|+|++|++++..|..|.++++|
T Consensus 220 ~~~~~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 298 (477)
T 2id5_A 220 CLYGLNL-TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYL 298 (477)
T ss_dssp TTTTCCC-SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTC
T ss_pred cccCccc-cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccC
Confidence 7777788 789999999986655678899999999999999998888899999999999999999999999999999999
Q ss_pred CEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCCCCCCCCCCcccccCCCCCCCCcc
Q 040849 566 ENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIKGVFSNSSAVSLDGNDNLCGGIS 628 (809)
Q Consensus 566 ~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc~~~~ 628 (809)
+.|||++|++++..+..|..+++|++|++++|++.+..+..+.+.......+.++...|..+.
T Consensus 299 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 299 RVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp CEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred CEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 999999999999888889999999999999999998766544444444456677777886553
No 35
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.9e-37 Score=355.08 Aligned_cols=174 Identities=16% Similarity=0.150 Sum_probs=118.4
Q ss_pred cccCCCCCCCCCCc----ccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCC
Q 040849 51 EVLSSWNYSRHFCQ----WKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQ 126 (809)
Q Consensus 51 ~~l~~W~~~~~~c~----w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~ 126 (809)
..+++|..+.+||. |.++.|+. ++ +........ ...-..+++++.|++++|.+....+..|+.+++|+
T Consensus 7 ~~l~~~~~~~~C~~~~~~~~c~~~~~---~i---~~~~~~~~~--~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~ 78 (597)
T 3oja_B 7 YNVKPRQPEYKCIDSNLQYDCVFYDV---HI---DMQTQDVYF--GFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE 78 (597)
T ss_dssp ----CCCSEECCCCC--CCSEEECSC---EE---CSSCCCCEE--SCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCS
T ss_pred ccccCCCCCCcCcccCcCceeEecCc---ee---ccccccccc--CcccccCCCceEEEeeCCCCCCcCHHHHccCCCCc
Confidence 35788988777874 65555531 11 111111111 11223467788888888888876666678888888
Q ss_pred ccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCc
Q 040849 127 FLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQ 206 (809)
Q Consensus 127 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 206 (809)
+|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|++++|.
T Consensus 79 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~ 158 (597)
T 3oja_B 79 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN 158 (597)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCc
Confidence 88888888887777788888888888888888887777777888888888888888876555566777777777777777
Q ss_pred ccccCcccccCCCCccEEEeecCcCC
Q 040849 207 FVGQIPKTLSQLKRMRFIGFGVNKLS 232 (809)
Q Consensus 207 l~~~~p~~l~~l~~L~~L~L~~n~l~ 232 (809)
+++..|..|..+++|+.|++++|.++
T Consensus 159 l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 159 LERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp CCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCCChhhhhcCCcCcEEECcCCCCC
Confidence 77666666666666666666665554
No 36
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1e-36 Score=334.63 Aligned_cols=175 Identities=15% Similarity=0.150 Sum_probs=113.7
Q ss_pred cCCCCCCCCCCc-ccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccC
Q 040849 53 LSSWNYSRHFCQ-WKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLD 131 (809)
Q Consensus 53 l~~W~~~~~~c~-w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls 131 (809)
+++|....+||. |.+..|.....++ ............-..++++++|++++|.++...+..|..+++|++|+|+
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ----CCEECBCC------EEEESCEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECT
T ss_pred cCCCCCccceehhhhhhccceeeeee-----ecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECC
Confidence 578987777775 5555554222222 1111111122223356788888888888876555557888888888888
Q ss_pred CCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccC
Q 040849 132 NNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQI 211 (809)
Q Consensus 132 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 211 (809)
+|.+++..+..|.++++|++|+|++|.+.+..|..|+++++|++|+|++|+++...+..|.++++|++|++++|++++..
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 157 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 157 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccC
Confidence 88888777777888888888888888888777777788888888888888887544455677777777777777777666
Q ss_pred cccccCCCCccEEEeecCcCC
Q 040849 212 PKTLSQLKRMRFIGFGVNKLS 232 (809)
Q Consensus 212 p~~l~~l~~L~~L~L~~n~l~ 232 (809)
|..|..+++|+.|++++|.++
T Consensus 158 ~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 158 DDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp TTTTSSCTTCCEEECCSSCCS
T ss_pred hhhccCCCCCCEEECCCCcCC
Confidence 666666666666666555544
No 37
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.5e-36 Score=337.08 Aligned_cols=309 Identities=22% Similarity=0.177 Sum_probs=221.6
Q ss_pred cCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCC
Q 040849 91 LSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSL 170 (809)
Q Consensus 91 ~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 170 (809)
+|..+. +++++|||++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++
T Consensus 26 ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 103 (477)
T 2id5_A 26 VPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 103 (477)
T ss_dssp CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTC
T ss_pred CCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCC
Confidence 444443 578899999999988888888888899999999888888888888888888888888888887666678888
Q ss_pred CCCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCceecc
Q 040849 171 SKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEF 250 (809)
Q Consensus 171 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l 250 (809)
++|++|+|++|++++..|..|.++++|++|++++|.+++..+..|.++++|+.|++++|++++..+..+.++
T Consensus 104 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l-------- 175 (477)
T 2id5_A 104 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHL-------- 175 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTC--------
T ss_pred CCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhccc--------
Confidence 888888888888888778888888888888888888887777778888888888888777775544444444
Q ss_pred CCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCCCCCCCCCcEEEeccccCCCC
Q 040849 251 PVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNG 330 (809)
Q Consensus 251 ~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~ 330 (809)
++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+.++.
T Consensus 176 -----------------~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~-------------------- 218 (477)
T 2id5_A 176 -----------------HGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTP-------------------- 218 (477)
T ss_dssp -----------------TTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECT--------------------
T ss_pred -----------------CCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCc--------------------
Confidence 4455555555554444444444444444444444333222111
Q ss_pred CCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecC
Q 040849 331 EKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRI 410 (809)
Q Consensus 331 ~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 410 (809)
..... .+|+.|++++|++++..+..+..+++|++|+|++|.+++..
T Consensus 219 ---------------------------------~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 264 (477)
T 2id5_A 219 ---------------------------------NCLYG-LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 264 (477)
T ss_dssp ---------------------------------TTTTT-CCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEEC
T ss_pred ---------------------------------ccccC-ccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccC
Confidence 11111 13666777777776544456777788888888888887777
Q ss_pred CccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCcc
Q 040849 411 PGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTG 480 (809)
Q Consensus 411 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 480 (809)
+..|.++++|+.|+|++|++++..|..|.++++|+.|++++|++++..+..|..+++|+.|++++|.+..
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 265 GSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp TTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred hhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 7777778888888888888877777777777777777777777776666667777777777777777763
No 38
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.1e-36 Score=320.89 Aligned_cols=254 Identities=30% Similarity=0.513 Sum_probs=238.1
Q ss_pred cCcEEEccCCcccc--cCCccccCCCCCCeeeCCC-ccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEE
Q 040849 371 RLRILRVGNNQLFG--NIPSGLRNLVNLERLLLEG-NQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITL 447 (809)
Q Consensus 371 ~L~~L~Ls~n~l~~--~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 447 (809)
+++.|++++|.+.+ .+|..+.++++|++|++++ |.+.+.+|..|.++++|++|++++|++++.+|..|.++++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 58889999999998 8899999999999999995 99999999999999999999999999999999999999999999
Q ss_pred EcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhccc-CCceEEEccCCcCcccCCCCccCCCCCCEEEccccc
Q 040849 448 SFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLS-SLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENK 526 (809)
Q Consensus 448 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 526 (809)
++++|.+++.+|..+..+++|++|++++|++++.+|..+..++ .+ ++|++++|++++.+|..+..++ |++|+|++|+
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L-~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLF-TSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTC-CEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcC-cEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 9999999999999999999999999999999999999999988 67 8999999999999999999987 9999999999
Q ss_pred cccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCCC
Q 040849 527 LSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIK 606 (809)
Q Consensus 527 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~ 606 (809)
+++.+|..|..+++|+.|+|++|.+++.+|. +..+++|++||+++|++++.+|..|..+++|++|++++|+++|.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9999999999999999999999999988776 888999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcccccCCCCCCCCc
Q 040849 607 GVFSNSSAVSLDGNDNLCGGI 627 (809)
Q Consensus 607 ~~~~~~~~~~~~~n~~lc~~~ 627 (809)
+.+..+....+.+|+.+||.+
T Consensus 288 ~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp TTGGGSCGGGTCSSSEEESTT
T ss_pred ccccccChHHhcCCCCccCCC
Confidence 888889999999999999864
No 39
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=3.9e-36 Score=320.75 Aligned_cols=271 Identities=18% Similarity=0.239 Sum_probs=206.3
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCccccCCC----CCCCCCCcccccccCC--------CCCcEEEEECCCCCCccccCccc
Q 040849 28 HKSNETDQLALLEFKAKVTHDPLEVLSSW----NYSRHFCQWKGVTCSP--------RHQRVTALLLPSLLLQGSLSPHI 95 (809)
Q Consensus 28 ~~~~~~~~~~ll~~k~~~~~~~~~~l~~W----~~~~~~c~w~gv~c~~--------~~~~v~~l~l~~~~l~g~~~~~l 95 (809)
..+..+|++||++||+++..|+.+.+++| ....++|.|.|+.|+. ...+|+.|+|+++.++ .+|+.+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 34567899999999999866887778899 4456899999999952 2367888888888887 677778
Q ss_pred cCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccC------
Q 040849 96 GNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGS------ 169 (809)
Q Consensus 96 ~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~------ 169 (809)
+++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..+.++++|++|+|++|.+.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 88888888888888887 77888888888888888888888 67878888888888888888777777776654
Q ss_pred ---CCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCc
Q 040849 170 ---LSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLN 246 (809)
Q Consensus 170 ---l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 246 (809)
+++|++|+|++|+++ .+|..++++++|++|++++|++++ +|..+..+++|++|++++|++.+.+|..+.++++|+
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 777777777777777 667777777777777777777774 455677777777777777777777777777777777
Q ss_pred eeccCCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcc
Q 040849 247 YFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGF 304 (809)
Q Consensus 247 ~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l 304 (809)
+|++++|.+.+.+|..+. .+++|++|++++|++.+.+|..+.++++|+.+++..+.+
T Consensus 257 ~L~L~~n~~~~~~p~~~~-~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLDIH-RLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp EEECTTCTTCCBCCTTGG-GCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred EEECCCCCchhhcchhhh-cCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 777777777767776665 567777777777777777777777776666666665443
No 40
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=5.7e-33 Score=299.87 Aligned_cols=307 Identities=27% Similarity=0.391 Sum_probs=175.6
Q ss_pred ccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCC
Q 040849 95 IGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLR 174 (809)
Q Consensus 95 l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 174 (809)
+..+++|++|++++|.+.. +| .+..+++|++|++++|.+++..+ +.++++|++|++++|.++.. +.+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCS
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCC
Confidence 3456677778888777764 33 37777777788887777774333 77777777777777777643 3577777777
Q ss_pred EEEcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCceeccCCcc
Q 040849 175 TLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQ 254 (809)
Q Consensus 175 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 254 (809)
+|++++|++++..+ +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.
T Consensus 114 ~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 77777777774332 7777777777777775544333 36777777777777777665433 4455555555555555
Q ss_pred cccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCCCCCCCCCcEEEeccccCCCCCCCc
Q 040849 255 LQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNGEKDD 334 (809)
Q Consensus 255 l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 334 (809)
+.+ ++. +. .+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..++
T Consensus 189 l~~-~~~-~~-~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~------------------- 243 (347)
T 4fmz_A 189 IED-ISP-LA-SLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-LANLS------------------- 243 (347)
T ss_dssp CCC-CGG-GG-GCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCT-------------------
T ss_pred ccc-ccc-cc-CCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-hhcCC-------------------
Confidence 542 222 21 34555555555555543222 3334444444444433332111 11222
Q ss_pred hhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccc
Q 040849 335 LEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSI 414 (809)
Q Consensus 335 ~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 414 (809)
+|++|++++|++++. ..+..+++|++|++++|.+++. ..+
T Consensus 244 ------------------------------------~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~ 283 (347)
T 4fmz_A 244 ------------------------------------QLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVL 283 (347)
T ss_dssp ------------------------------------TCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGG
T ss_pred ------------------------------------CCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhh
Confidence 244444444444432 2345555666666666655543 235
Q ss_pred cCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCc
Q 040849 415 GDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLT 479 (809)
Q Consensus 415 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 479 (809)
..+++|++|++++|++++..|..+..+++|++|++++|++++..| +..+++|+.|++++|.++
T Consensus 284 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 284 NNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 556666666666666665555555666666666666666655444 555666666666666553
No 41
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=6e-33 Score=304.63 Aligned_cols=331 Identities=22% Similarity=0.249 Sum_probs=232.6
Q ss_pred CCceeccCCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCC-CCCCCCCcEEEe
Q 040849 244 SLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPS-FGNLHKLQWVSI 322 (809)
Q Consensus 244 ~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L 322 (809)
+++.+++++|.++ .+|..++..+++|++|++++|.+++..+..+..+++|+.|++++|.+++..|. +..+++|++|++
T Consensus 46 ~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 46 NQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 3444444444443 34443333455555555555555544444555555555555555555554443 455555555555
Q ss_pred ccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCC
Q 040849 323 SMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLE 402 (809)
Q Consensus 323 s~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls 402 (809)
++|.++.... ..+..+ ++|++|++++|++.+..|..+..+++|++|+++
T Consensus 125 ~~n~l~~l~~------------------------------~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 173 (390)
T 3o6n_A 125 ERNDLSSLPR------------------------------GIFHNT-PKLTTLSMSNNNLERIEDDTFQATTSLQNLQLS 173 (390)
T ss_dssp CSSCCCCCCT------------------------------TTTTTC-TTCCEEECCSSCCCBCCTTTTSSCTTCCEEECC
T ss_pred CCCccCcCCH------------------------------HHhcCC-CCCcEEECCCCccCccChhhccCCCCCCEEECC
Confidence 5555443221 111222 237777777777777777778888888888888
Q ss_pred CccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCcccc
Q 040849 403 GNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTI 482 (809)
Q Consensus 403 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 482 (809)
+|++++. .+..+++|+.|++++|.+++. ...++|++|++++|.+... |.. ..++|+.|++++|++++.
T Consensus 174 ~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~- 241 (390)
T 3o6n_A 174 SNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT- 241 (390)
T ss_dssp SSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC-
T ss_pred CCcCCcc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc-
Confidence 8888754 255678888888888887643 3345788889999888765 322 247899999999999853
Q ss_pred CcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCC
Q 040849 483 PTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSL 562 (809)
Q Consensus 483 p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 562 (809)
..+..++++ +.|++++|++++..|..|..+++|++|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+
T Consensus 242 -~~l~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l 317 (390)
T 3o6n_A 242 -AWLLNYPGL-VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQF 317 (390)
T ss_dssp -GGGGGCTTC-SEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHH
T ss_pred -HHHcCCCCc-cEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCcccccc
Confidence 577888888 789999999998889999999999999999999985 5667788999999999999998 567778899
Q ss_pred CCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCCCCCCCCCCcccccCCCCCCCC
Q 040849 563 RGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIKGVFSNSSAVSLDGNDNLCGG 626 (809)
Q Consensus 563 ~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc~~ 626 (809)
++|+.|++++|+++... +..+++|+.|++++|++++.... ..+..+....+.+++..|..
T Consensus 318 ~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 318 DRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp TTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCT
T ss_pred CcCCEEECCCCccceeC---chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecc
Confidence 99999999999998653 67789999999999999875332 23455555667777777864
No 42
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.7e-32 Score=296.10 Aligned_cols=306 Identities=25% Similarity=0.367 Sum_probs=219.6
Q ss_pred cCCCCCceeccCCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCCCCCCCCCcE
Q 040849 240 YNLSSLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPSFGNLHKLQW 319 (809)
Q Consensus 240 ~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~ 319 (809)
..+++|+.|++++|.+. .+|. +. .+++|++|++++|++++..+ +..+++|++|++++|.++. ++.+..+++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~~-~~-~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQG-IE-YLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-ISALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCTT-GG-GCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CGGGTTCTTCSE
T ss_pred hhcccccEEEEeCCccc-cchh-hh-hcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-chHHcCCCcCCE
Confidence 35556666666666665 3333 22 45666666666666654322 5556666666666665553 234555555555
Q ss_pred EEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCee
Q 040849 320 VSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERL 399 (809)
Q Consensus 320 L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L 399 (809)
|++++|.+.+ ..+ +..+ ++|+.|++++|.....++ .+..+++|++|
T Consensus 115 L~l~~n~i~~------------------------------~~~--~~~l-~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L 160 (347)
T 4fmz_A 115 LYLNEDNISD------------------------------ISP--LANL-TKMYSLNLGANHNLSDLS-PLSNMTGLNYL 160 (347)
T ss_dssp EECTTSCCCC------------------------------CGG--GTTC-TTCCEEECTTCTTCCCCG-GGTTCTTCCEE
T ss_pred EECcCCcccC------------------------------chh--hccC-CceeEEECCCCCCccccc-chhhCCCCcEE
Confidence 5555555443 221 2233 247777777775554433 37788888888
Q ss_pred eCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCc
Q 040849 400 LLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLT 479 (809)
Q Consensus 400 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 479 (809)
++++|.+.+..+ +..+++|++|++++|++.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|+++
T Consensus 161 ~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~ 234 (347)
T 4fmz_A 161 TVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKIT 234 (347)
T ss_dssp ECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred EecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccC
Confidence 888888875443 7788888888888888875543 7778888888888888876544 778888888888888887
Q ss_pred cccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhh
Q 040849 480 GTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSF 559 (809)
Q Consensus 480 ~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 559 (809)
+..+ +..++++ +.|++++|++++. +.+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..|
T Consensus 235 ~~~~--~~~l~~L-~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 235 DLSP--LANLSQL-TWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp CCGG--GTTCTTC-CEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred CCcc--hhcCCCC-CEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHh
Confidence 5433 7778888 7888888888864 4678889999999999999864 468899999999999999999999999
Q ss_pred cCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCccc
Q 040849 560 SSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFE 600 (809)
Q Consensus 560 ~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 600 (809)
.++++|+.|++++|++++..| +..+++|++|++++|+++
T Consensus 308 ~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 308 GGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999999999998777 888999999999999875
No 43
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=9.3e-33 Score=319.87 Aligned_cols=238 Identities=22% Similarity=0.232 Sum_probs=178.2
Q ss_pred CcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEccc
Q 040849 372 LRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDK 451 (809)
Q Consensus 372 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 451 (809)
|++|++++|.+.+..|..+..+++|++|++++|.+++.. +..+++|+.|++++|.+++. ...++|+.|++++
T Consensus 149 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~ 220 (597)
T 3oja_B 149 LTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASH 220 (597)
T ss_dssp CCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCS
T ss_pred CCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc-----cCCchhheeeccC
Confidence 555555555555555556666666777777777666432 44566677777777766542 2344677777777
Q ss_pred ccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEcccccccccc
Q 040849 452 NMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEI 531 (809)
Q Consensus 452 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 531 (809)
|.+....+.. .++|+.|+|++|.+++ +..+..++.| +.|+|++|.+++.+|..|..+++|+.|+|++|++++ +
T Consensus 221 n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l 293 (597)
T 3oja_B 221 NSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGL-VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-L 293 (597)
T ss_dssp SCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTC-SEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-E
T ss_pred Cccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCC-CEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-C
Confidence 7776543322 2578888888888875 4667788888 788888888888888889999999999999999986 5
Q ss_pred CccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCCCCCCCC
Q 040849 532 PNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIKGVFSN 611 (809)
Q Consensus 532 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~ 611 (809)
|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|++++.. +..+++|+.|++++|+++|..+. ..+..
T Consensus 294 ~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~ 368 (597)
T 3oja_B 294 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRN 368 (597)
T ss_dssp ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTT
T ss_pred CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHH-HHHHH
Confidence 777788999999999999999 67788899999999999999998663 66788999999999999986532 24556
Q ss_pred CCcccccCCCCCCCCccc
Q 040849 612 SSAVSLDGNDNLCGGISE 629 (809)
Q Consensus 612 ~~~~~~~~n~~lc~~~~~ 629 (809)
+....+.+++..|+....
T Consensus 369 ~~~~~~~~~~~~C~~~~~ 386 (597)
T 3oja_B 369 VARPAVDDADQHCKIDYQ 386 (597)
T ss_dssp CCTTTBCCCCCCCCTTCE
T ss_pred HhhhccccccccCCcchh
Confidence 666678888889986543
No 44
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=6e-32 Score=289.71 Aligned_cols=287 Identities=25% Similarity=0.313 Sum_probs=143.6
Q ss_pred ccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEccc
Q 040849 101 LRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHY 180 (809)
Q Consensus 101 L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 180 (809)
++.++++++.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 444555555554 3344332 3555555555555554455555555555555555555555555555555555555555
Q ss_pred ccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCC--CcchhccCCCCCceeccCCcccccc
Q 040849 181 NNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSG--EIPFSIYNLSSLNYFEFPVNQLQGS 258 (809)
Q Consensus 181 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~l~~n~l~~~ 258 (809)
|+++ .+|..+. ++|++|++++|++++..+..|.++++|+.|++++|.++. ..+..+..+ +|++|++++|+++ .
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-~ 186 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT-G 186 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-S
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-c
Confidence 5555 3333332 455666666665555444455555556666555555532 334444444 4555555555544 2
Q ss_pred cChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCCCCCCCCCcEEEeccccCCCCCCCchhhh
Q 040849 259 LPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNGEKDDLEFV 338 (809)
Q Consensus 259 ~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 338 (809)
+|..+. ++|++|++++|.+++..+..+..+++|+.|
T Consensus 187 l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L----------------------------------------- 222 (332)
T 2ft3_A 187 IPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRL----------------------------------------- 222 (332)
T ss_dssp CCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCC-----------------------------------------
T ss_pred cCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEE-----------------------------------------
Confidence 333321 345555555555444333333333333333
Q ss_pred hcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCC
Q 040849 339 NSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLH 418 (809)
Q Consensus 339 ~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 418 (809)
++++|++.+..+..+..+++|++|++++|+++ .+|..+..++
T Consensus 223 -------------------------------------~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~ 264 (332)
T 2ft3_A 223 -------------------------------------GLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLK 264 (332)
T ss_dssp -------------------------------------BCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCT
T ss_pred -------------------------------------ECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCc
Confidence 33333333333334444455555555555554 4444455555
Q ss_pred CCCEEEeeCCeeecccCcCCcC------CCCccEEEcccccCc--ccCCccccCCCCCcEEeCcCCc
Q 040849 419 KLQRLGLQGNKFLGEIPSSIGN------LTLLITLSFDKNMLE--GSIPSSLGKCQNLILLGLSNNN 477 (809)
Q Consensus 419 ~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~Ls~N~ 477 (809)
+|++|++++|++++..+..|.. ..+|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 265 ~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 265 LLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp TCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 5555555555555444444433 244566666666655 4455566666666666666654
No 45
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.9e-31 Score=285.62 Aligned_cols=106 Identities=29% Similarity=0.359 Sum_probs=50.6
Q ss_pred CCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEc
Q 040849 99 SFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAV 178 (809)
Q Consensus 99 ~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 178 (809)
+.|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|.++++|++|++++|.++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 34555555555555544445555555555555555555444555555555555555555544 2232222 34444444
Q ss_pred ccccCcccCCccCCCCCCCCEEEcccCcc
Q 040849 179 HYNNLSGQIPSSFGNLSSLEVLSASANQF 207 (809)
Q Consensus 179 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 207 (809)
++|++++..+..|.++++|++|++++|.+
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 157 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPL 157 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcC
Confidence 44444433333344444444444444443
No 46
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=1.1e-34 Score=326.16 Aligned_cols=385 Identities=15% Similarity=0.116 Sum_probs=197.9
Q ss_pred CCCCEEEcccccCcccCCcc-CCCCCCCCEEEcccCcccc----cCcccccCCCCccEEEeecCcCCCCcchhccCCCCC
Q 040849 171 SKLRTLAVHYNNLSGQIPSS-FGNLSSLEVLSASANQFVG----QIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSL 245 (809)
Q Consensus 171 ~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 245 (809)
++|++|+|++|+++...... +..+++|++|++++|+++. .++..+..+++|++|++++|.+++.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~----------- 71 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDV----------- 71 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHH-----------
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChH-----------
Confidence 45666777766665433222 5556666666666666653 2334445555555555555554433
Q ss_pred ceeccCCcccccccChhhhcCCC----CCcEEEccCccccc----cCCcccccCCCCceEecCCCcceeeCCC------C
Q 040849 246 NYFEFPVNQLQGSLPSDLGFTLP----NLERLNLGENQFTG----PIPASISNASHLMRLTIPINGFSGKVPS------F 311 (809)
Q Consensus 246 ~~L~l~~n~l~~~~p~~~~~~l~----~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~l~~n~l~~~~~~------~ 311 (809)
.+..+...++ +|++|++++|.++. .++..+..+++|++|++++|.+++..+. .
T Consensus 72 -------------~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~ 138 (461)
T 1z7x_W 72 -------------GVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLL 138 (461)
T ss_dssp -------------HHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHT
T ss_pred -------------HHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHh
Confidence 2222222233 46666666666552 3355555556666666666555432211 1
Q ss_pred CCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhh----ccccCcEEEccCCccccc--
Q 040849 312 GNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGN----LSTRLRILRVGNNQLFGN-- 385 (809)
Q Consensus 312 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~----~~~~L~~L~Ls~n~l~~~-- 385 (809)
...++|+.|++++|.+++.... .....+..+++|+.|++++|.+.+..+..+.. ..++|++|++++|.+++.
T Consensus 139 ~~~~~L~~L~L~~n~l~~~~~~--~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~ 216 (461)
T 1z7x_W 139 DPQCRLEKLQLEYCSLSAASCE--PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNC 216 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHH--HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHH
T ss_pred cCCCcceEEECCCCCCCHHHHH--HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHH
Confidence 2234555555555555432110 11122334445555555555544433322222 112355555555544432
Q ss_pred --CCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCccc----CC
Q 040849 386 --IPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGS----IP 459 (809)
Q Consensus 386 --~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~----~p 459 (809)
++..+..+++|++|++++|.+++.....+ .+..+..+++|++|++++|.+++. ++
T Consensus 217 ~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l-------------------~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 217 RDLCGIVASKASLRELALGSNKLGDVGMAEL-------------------CPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp HHHHHHHHHCTTCCEEECCSSBCHHHHHHHH-------------------HHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred HHHHHHHHhCCCccEEeccCCcCChHHHHHH-------------------HHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 23334444444444444444432210000 011122344555555555555432 34
Q ss_pred ccccCCCCCcEEeCcCCcCccccCcchhcc-----cCCceEEEccCCcCccc----CCCCccCCCCCCEEEccccccccc
Q 040849 460 SSLGKCQNLILLGLSNNNLTGTIPTEVIGL-----SSLSIYLDLSQNQLNGT----LPSNFGILKNLGVLDVSENKLSGE 530 (809)
Q Consensus 460 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~l~~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 530 (809)
..+..+++|++|++++|++++..+..+... +++ +.|++++|.+++. ++..+..+++|++|||++|++++.
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L-~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQL-ESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCC-CEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccc-eeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccc
Confidence 444455556666666665554333333221 344 5666666666543 344455667777777777777765
Q ss_pred cCccccC-----CCCCCEEeCcCCcccc----ccchhhcCCCCCCEEeCCCCCcccccccccc-----cCCCCCeEEccC
Q 040849 531 IPNSLGS-----CVRLEQLGMNGNFFQG----NIPSSFSSLRGIENLDLSRNNLSGRIPKYFE-----NFLFLQNLNLSF 596 (809)
Q Consensus 531 ~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~-----~l~~L~~l~ls~ 596 (809)
.+..+.. .++|++|+|++|.+++ .+|..+..+++|++||+++|++++.....+. ....|+.|++.+
T Consensus 357 ~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~ 436 (461)
T 1z7x_W 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYD 436 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred cHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecc
Confidence 5554443 5678888888888876 6777777788888888888887754322221 234577777777
Q ss_pred Ccccc
Q 040849 597 NHFEG 601 (809)
Q Consensus 597 N~l~g 601 (809)
+.+..
T Consensus 437 ~~~~~ 441 (461)
T 1z7x_W 437 IYWSE 441 (461)
T ss_dssp CCCCH
T ss_pred cccCH
Confidence 76654
No 47
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=2.9e-31 Score=284.37 Aligned_cols=287 Identities=23% Similarity=0.283 Sum_probs=166.8
Q ss_pred CCceeccCCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCC-CCCCCCCcEEEe
Q 040849 244 SLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPS-FGNLHKLQWVSI 322 (809)
Q Consensus 244 ~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L 322 (809)
+++.++++++.++ .+|..+ .++|+.|++++|.+++..|..+.++++|++|++++|++++..|. +..+++|++|++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEI---SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCC---CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCC---CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 4555566666555 555543 25677777777777766666677777777777777777665554 666666666666
Q ss_pred ccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCC
Q 040849 323 SMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLE 402 (809)
Q Consensus 323 s~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls 402 (809)
++|.++... ..+. ++|++|++++|++.+..+..+.++++|++|+++
T Consensus 110 ~~n~l~~l~-------------------------------~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 155 (332)
T 2ft3_A 110 SKNHLVEIP-------------------------------PNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMG 155 (332)
T ss_dssp CSSCCCSCC-------------------------------SSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECC
T ss_pred CCCcCCccC-------------------------------cccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECC
Confidence 666554221 1111 236666666666665555556666666666666
Q ss_pred Cccce--ecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCcc
Q 040849 403 GNQFT--GRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTG 480 (809)
Q Consensus 403 ~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 480 (809)
+|.++ +..+..+..+ +|++|++++|++++ +|..+. ++|++|++++|.+++..+..+..+++|++
T Consensus 156 ~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~---------- 221 (332)
T 2ft3_A 156 GNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYR---------- 221 (332)
T ss_dssp SCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSC----------
T ss_pred CCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCE----------
Confidence 66664 2445555555 56666666665553 333222 34444455555554444444444444444
Q ss_pred ccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhc
Q 040849 481 TIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFS 560 (809)
Q Consensus 481 ~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 560 (809)
|++++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..|.
T Consensus 222 ---------------L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 222 ---------------LGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFC 285 (332)
T ss_dssp ---------------CBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSS
T ss_pred ---------------EECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcc
Confidence 455555555444445555666666666666666 5566666666666666666666665555554
Q ss_pred CC------CCCCEEeCCCCCcc--cccccccccCCCCCeEEccCCc
Q 040849 561 SL------RGIENLDLSRNNLS--GRIPKYFENFLFLQNLNLSFNH 598 (809)
Q Consensus 561 ~l------~~L~~LdLs~N~l~--~~~p~~~~~l~~L~~l~ls~N~ 598 (809)
.. ..|+.|++++|.+. +..|..|..++.|+.+++++|+
T Consensus 286 ~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 286 PVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 42 45777777777776 5666777777777777777764
No 48
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=8.6e-31 Score=280.52 Aligned_cols=288 Identities=23% Similarity=0.262 Sum_probs=166.3
Q ss_pred CCceeccCCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCC-CCCCCCCcEEEe
Q 040849 244 SLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPS-FGNLHKLQWVSI 322 (809)
Q Consensus 244 ~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L 322 (809)
+++.++++++.++ .+|..+ .++++.|++++|.+++..+..+.++++|++|++++|.+++..|. +..+++|++|++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccC---CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 3455555555554 455443 25677777777777766666677777777777777777766554 666666666666
Q ss_pred ccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCC
Q 040849 323 SMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLE 402 (809)
Q Consensus 323 s~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls 402 (809)
++|.++... ..+. ++|++|++++|++.+..+..+.++++|++|+++
T Consensus 108 s~n~l~~l~-------------------------------~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 153 (330)
T 1xku_A 108 SKNQLKELP-------------------------------EKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELG 153 (330)
T ss_dssp CSSCCSBCC-------------------------------SSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECC
T ss_pred CCCcCCccC-------------------------------hhhc---ccccEEECCCCcccccCHhHhcCCccccEEECC
Confidence 666654221 1111 236667777777666666666667777777777
Q ss_pred Ccccee--cCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCcc
Q 040849 403 GNQFTG--RIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTG 480 (809)
Q Consensus 403 ~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 480 (809)
+|.++. ..+..+.++++|++|++++|++++ +|..+. ++|++|++++|++++..|..+..+++|+.|++++|++++
T Consensus 154 ~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp SSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred CCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 776642 455566666666666666666653 333222 455555555555555555555555555555555555544
Q ss_pred ccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhc
Q 040849 481 TIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFS 560 (809)
Q Consensus 481 ~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 560 (809)
..+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..|.
T Consensus 231 -------------------------~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~ 284 (330)
T 1xku_A 231 -------------------------VDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFC 284 (330)
T ss_dssp -------------------------ECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSS
T ss_pred -------------------------eChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcC
Confidence 44444445555555555555555 4455555555555555555555555444443
Q ss_pred C------CCCCCEEeCCCCCccc--ccccccccCCCCCeEEccCCc
Q 040849 561 S------LRGIENLDLSRNNLSG--RIPKYFENFLFLQNLNLSFNH 598 (809)
Q Consensus 561 ~------l~~L~~LdLs~N~l~~--~~p~~~~~l~~L~~l~ls~N~ 598 (809)
. ...|+.|++++|.+.. ..|..|..+..++.+++++|+
T Consensus 285 ~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 285 PPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 2 2556667777776643 445666667777777777664
No 49
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.1e-34 Score=323.96 Aligned_cols=356 Identities=17% Similarity=0.136 Sum_probs=230.9
Q ss_pred CCccEEeCCCCCCCccCCcc-ccccccCCccccCCCcCcc----cCCccccCCCcCcEEEcccCCCCCCCcccc-cCCC-
Q 040849 99 SFLRVLDLKNNSFRNEIPQE-IGYLFRLQFLWLDNNTFGG----QIPDNISHCVNLESLRLGFNELVGKVPRKL-GSLS- 171 (809)
Q Consensus 99 ~~L~~LdLs~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~- 171 (809)
++|++|||++|+++...... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+....+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 46778888888877554333 6778888888888888774 345667777888888888888765444333 3344
Q ss_pred ---CCCEEEcccccCcc----cCCccCCCCCCCCEEEcccCcccccCccccc-----CCCCccEEEeecCcCCCCc----
Q 040849 172 ---KLRTLAVHYNNLSG----QIPSSFGNLSSLEVLSASANQFVGQIPKTLS-----QLKRMRFIGFGVNKLSGEI---- 235 (809)
Q Consensus 172 ---~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-----~l~~L~~L~L~~n~l~~~~---- 235 (809)
+|++|+|++|+++. .++..+..+++|++|++++|.+++..+..+. ..++|++|++++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 68888888888874 4577788888888888888888755444332 3567888888888887643
Q ss_pred chhccCCCCCceeccCCcccccccChhhh----cCCCCCcEEEccCcccccc----CCcccccCCCCceEecCCCcceee
Q 040849 236 PFSIYNLSSLNYFEFPVNQLQGSLPSDLG----FTLPNLERLNLGENQFTGP----IPASISNASHLMRLTIPINGFSGK 307 (809)
Q Consensus 236 ~~~l~~l~~L~~L~l~~n~l~~~~p~~~~----~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~l~~n~l~~~ 307 (809)
+..+..+++|++|++++|.+++..+..+. ...++|++|++++|.+++. ++..+..+++|+.|++++|.++..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 55566778888888888888755444333 2356899999999988864 466777888899999998887653
Q ss_pred C-----CC-CCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhc----cccCcEEEc
Q 040849 308 V-----PS-FGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNL----STRLRILRV 377 (809)
Q Consensus 308 ~-----~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~----~~~L~~L~L 377 (809)
. +. +..+++|+.|++++|.++..... .+...+..+++|+.|++++|.+.+..+..+... .++|++|++
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~--~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 320 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCG--DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 320 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH--HHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHH--HHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEc
Confidence 2 22 34577888888888877542110 122334456667777777776665544433332 134666666
Q ss_pred cCCccccc----CCccccCCCCCCeeeCCCccceecCCccccC-----CCCCCEEEeeCCeeec----ccCcCCcCCCCc
Q 040849 378 GNNQLFGN----IPSGLRNLVNLERLLLEGNQFTGRIPGSIGD-----LHKLQRLGLQGNKFLG----EIPSSIGNLTLL 444 (809)
Q Consensus 378 s~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L 444 (809)
++|.+++. ++..+..+++|++|++++|.+++..+..+.. .++|++|++++|++++ .+|..+..+++|
T Consensus 321 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L 400 (461)
T 1z7x_W 321 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSL 400 (461)
T ss_dssp TTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCC
T ss_pred CCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCc
Confidence 66666543 3444555566666666666655443332221 4455555555555554 444445555555
Q ss_pred cEEEcccccCcc
Q 040849 445 ITLSFDKNMLEG 456 (809)
Q Consensus 445 ~~L~L~~N~l~~ 456 (809)
++|++++|++++
T Consensus 401 ~~L~l~~N~i~~ 412 (461)
T 1z7x_W 401 RELDLSNNCLGD 412 (461)
T ss_dssp CEEECCSSSCCH
T ss_pred cEEECCCCCCCH
Confidence 555555555543
No 50
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.5e-31 Score=286.36 Aligned_cols=289 Identities=20% Similarity=0.198 Sum_probs=216.6
Q ss_pred CCCCCCCCcccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcC
Q 040849 56 WNYSRHFCQWKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTF 135 (809)
Q Consensus 56 W~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 135 (809)
|.....+|.|.|+ |+. +++.++ .+|..+. ++|++|+|++|.+++..+..|+++++|++|+|++|.+
T Consensus 23 ~~~~~~~C~~~~~-c~~----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 88 (353)
T 2z80_A 23 SNQASLSCDRNGI-CKG----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGI 88 (353)
T ss_dssp ----CCEECTTSE-EEC----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCccCCCCCCCeE-eeC----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCcc
Confidence 4445678999987 753 334444 3565554 5899999999999987777999999999999999999
Q ss_pred cccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcccCC-ccCCCCCCCCEEEcccC-cccccCcc
Q 040849 136 GGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIP-SSFGNLSSLEVLSASAN-QFVGQIPK 213 (809)
Q Consensus 136 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N-~l~~~~p~ 213 (809)
++..|..|.++++|++|+|++|++++..+..|.++++|++|++++|++++..+ ..|.++++|++|++++| .+++..+.
T Consensus 89 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 168 (353)
T 2z80_A 89 NTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRK 168 (353)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTT
T ss_pred CccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHH
Confidence 98888999999999999999999997766679999999999999999995444 47899999999999999 47777778
Q ss_pred cccCCCCccEEEeecCcCCCCcchhccCCCCCceeccCCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCC
Q 040849 214 TLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASH 293 (809)
Q Consensus 214 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 293 (809)
.|.++++|+.|++++|.+++..|..+..+++|++|++++|.++ .+|..+...+++|+.|++++|.+++..+..+..
T Consensus 169 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~--- 244 (353)
T 2z80_A 169 DFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELST--- 244 (353)
T ss_dssp TTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC-------
T ss_pred HccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCcccccccccccc---
Confidence 8999999999999999999888888988889999999888885 566655545778888888888777543322211
Q ss_pred CceEecCCCcceeeCCCCCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCc
Q 040849 294 LMRLTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLR 373 (809)
Q Consensus 294 L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~ 373 (809)
...... ++
T Consensus 245 -----------------~~~~~~-------------------------------------------------------l~ 252 (353)
T 2z80_A 245 -----------------GETNSL-------------------------------------------------------IK 252 (353)
T ss_dssp -------------------CCCC-------------------------------------------------------CC
T ss_pred -----------------ccccch-------------------------------------------------------hh
Confidence 001111 23
Q ss_pred EEEccCCcccc----cCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeeccc
Q 040849 374 ILRVGNNQLFG----NIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEI 434 (809)
Q Consensus 374 ~L~Ls~n~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 434 (809)
.++++++.+.+ .+|..+..+++|++|++++|+++...+..|..+++|++|++++|++.+..
T Consensus 253 ~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 253 KFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp EEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 33333333322 34566777777888888888777433334577777888888887776543
No 51
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.1e-32 Score=320.15 Aligned_cols=185 Identities=16% Similarity=0.149 Sum_probs=91.9
Q ss_pred CCCcccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCCCCC---CccCCcccc------------ccccC
Q 040849 61 HFCQWKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSF---RNEIPQEIG------------YLFRL 125 (809)
Q Consensus 61 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l---~~~~p~~~~------------~l~~L 125 (809)
-|++|.++.+.. .+.. .+.+ ......+..+.++++|++|+|+++.. .+.+|..++ .+++|
T Consensus 40 vck~W~~~~~~~--~~~l--~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L 114 (592)
T 3ogk_B 40 VCRRWFKIDSET--REHV--TMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQL 114 (592)
T ss_dssp SCHHHHHHHHHH--CCEE--EESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HhHHHHHhhhcc--ccEE--EEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCC
Confidence 355899986542 1222 2221 22333344556788899999887532 133343332 55666
Q ss_pred CccccCCCcCcccCCccccCC--CcCcEEEcccCCC-CC-CCcccccCCCCCCEEEcccccCccc----CCccCCCCCCC
Q 040849 126 QFLWLDNNTFGGQIPDNISHC--VNLESLRLGFNEL-VG-KVPRKLGSLSKLRTLAVHYNNLSGQ----IPSSFGNLSSL 197 (809)
Q Consensus 126 ~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l-~~-~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L 197 (809)
++|+|++|.+++..+..+... .+|++|+|++|.- .. .++.....+++|++|+|++|.+++. ++..+.++++|
T Consensus 115 ~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L 194 (592)
T 3ogk_B 115 KSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSL 194 (592)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCC
T ss_pred CeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCc
Confidence 666666666555544444442 2366666665541 10 0111123455666666666655443 22233445555
Q ss_pred CEEEcccCccc----ccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCceeccC
Q 040849 198 EVLSASANQFV----GQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFP 251 (809)
Q Consensus 198 ~~L~Ls~N~l~----~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 251 (809)
++|++++|.++ +.++..+.++++|+.|++++|.+.+ ++..+.++++|+.|+++
T Consensus 195 ~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~ 251 (592)
T 3ogk_B 195 EVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGG 251 (592)
T ss_dssp CEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEEC
T ss_pred cEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccc
Confidence 66666555554 2223333445555555555555443 33444444555555444
No 52
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.6e-29 Score=269.50 Aligned_cols=225 Identities=20% Similarity=0.248 Sum_probs=207.0
Q ss_pred ccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEc
Q 040849 370 TRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSF 449 (809)
Q Consensus 370 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 449 (809)
.+++.|++++|++. .+|..+.++++|++|+|++|.++ .+|..+..+++|++|+|++|+++ .+|..+.++++|++|++
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 45899999999998 67778888999999999999998 88888999999999999999998 77888999999999999
Q ss_pred ccccCcccCCccccC---------CCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEE
Q 040849 450 DKNMLEGSIPSSLGK---------CQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVL 520 (809)
Q Consensus 450 ~~N~l~~~~p~~l~~---------l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L 520 (809)
++|++.+.+|..+.. +++|++|++++|+++ .+|..+..+++| ++|++++|++++ +|..+..+++|++|
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L-~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNL-KSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTC-CEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCC-CEEEccCCCCCc-CchhhccCCCCCEE
Confidence 999888888887765 999999999999999 889999999999 799999999995 56679999999999
Q ss_pred EccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCccc
Q 040849 521 DVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFE 600 (809)
Q Consensus 521 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 600 (809)
+|++|++.+.+|..++++++|++|+|++|++.+.+|..+.++++|+.|||++|++.+.+|..+.++++|+.+++..|.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987665
No 53
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=5.1e-32 Score=314.65 Aligned_cols=428 Identities=14% Similarity=0.078 Sum_probs=205.7
Q ss_pred cCCccccccccCCccccCCCcC---cccCCcccc------------CCCcCcEEEcccCCCCCCCcccccCC--CCCCEE
Q 040849 114 EIPQEIGYLFRLQFLWLDNNTF---GGQIPDNIS------------HCVNLESLRLGFNELVGKVPRKLGSL--SKLRTL 176 (809)
Q Consensus 114 ~~p~~~~~l~~L~~L~Ls~N~l---~~~~p~~~~------------~l~~L~~L~Ls~N~l~~~~p~~l~~l--~~L~~L 176 (809)
..+..+..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..+... .+|++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 3444566777788888876532 133443333 45556666666655554444444332 235555
Q ss_pred Eccccc-Ccc-cCCccCCCCCCCCEEEcccCccccc----CcccccCCCCccEEEeecCcCCCCcchhccCCCCCceecc
Q 040849 177 AVHYNN-LSG-QIPSSFGNLSSLEVLSASANQFVGQ----IPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEF 250 (809)
Q Consensus 177 ~Ls~N~-l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l 250 (809)
+|++|. ++. .++....++++|++|+|++|.+++. ++..+..+++|+.|++++|.+++...
T Consensus 144 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~-------------- 209 (592)
T 3ogk_B 144 KLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISP-------------- 209 (592)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCH--------------
T ss_pred ECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCH--------------
Confidence 555554 110 1111123445555555555555433 22223334445555554444432111
Q ss_pred CCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcce---eeC-CCCCCCCCCcEEEecccc
Q 040849 251 PVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFS---GKV-PSFGNLHKLQWVSISMNH 326 (809)
Q Consensus 251 ~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~---~~~-~~~~~l~~L~~L~Ls~n~ 326 (809)
+.++..+. .+++|++|++++|.+.+ +|..+..+++|+.|+++..... +.. ..+..+++|+.++++.+.
T Consensus 210 ------~~l~~~~~-~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~ 281 (592)
T 3ogk_B 210 ------KDLETIAR-NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG 281 (592)
T ss_dssp ------HHHHHHHH-HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC
T ss_pred ------HHHHHHHh-hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc
Confidence 12222222 45666666666666654 4455666666666666542211 001 114445555555554432
Q ss_pred CCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCC-ccccCCCCCCeeeCCCcc
Q 040849 327 LGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIP-SGLRNLVNLERLLLEGNQ 405 (809)
Q Consensus 327 l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p-~~l~~l~~L~~L~Ls~N~ 405 (809)
. +.+|..+..++ +|++|++++|.+++... ..+..+++|++|+++++.
T Consensus 282 ~-------------------------------~~l~~~~~~~~-~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~ 329 (592)
T 3ogk_B 282 P-------------------------------NEMPILFPFAA-QIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVI 329 (592)
T ss_dssp T-------------------------------TTGGGGGGGGG-GCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGG
T ss_pred h-------------------------------hHHHHHHhhcC-CCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCcc
Confidence 1 12222222222 35555555555443222 224556666666666322
Q ss_pred ceecCCccccCCCCCCEEEee-----------CCeeeccc-CcCCcCCCCccEEEcccccCcccCCccccC-CCCCcEEe
Q 040849 406 FTGRIPGSIGDLHKLQRLGLQ-----------GNKFLGEI-PSSIGNLTLLITLSFDKNMLEGSIPSSLGK-CQNLILLG 472 (809)
Q Consensus 406 l~~~~p~~~~~l~~L~~L~Ls-----------~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~-l~~L~~L~ 472 (809)
..+.++.....+++|++|+++ .|.+++.. +.....+++|++|+++.|.+++..+..+.. +++|+.|+
T Consensus 330 ~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~ 409 (592)
T 3ogk_B 330 GDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFR 409 (592)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEE
T ss_pred CHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEE
Confidence 222233333455666666666 24444321 111233556666666666665554444443 56666666
Q ss_pred Cc----CCcCccc-----cCcchhcccCCceEEEccCC--cCcccCCCCcc-CCCCCCEEEccccccccc-cCccccCCC
Q 040849 473 LS----NNNLTGT-----IPTEVIGLSSLSIYLDLSQN--QLNGTLPSNFG-ILKNLGVLDVSENKLSGE-IPNSLGSCV 539 (809)
Q Consensus 473 Ls----~N~l~~~-----~p~~~~~l~~l~~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~-~p~~~~~l~ 539 (809)
++ .|++++. ++..+.++++| +.|+++++ .+++..+..+. .+++|+.|+|++|++++. ++..+.+++
T Consensus 410 l~~~~~~n~l~~~p~~~~~~~~~~~~~~L-~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 488 (592)
T 3ogk_B 410 LVLLDREERITDLPLDNGVRSLLIGCKKL-RRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCP 488 (592)
T ss_dssp EEECSCCSCCSSCCCHHHHHHHHHHCTTC-CEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCT
T ss_pred EeecCCCccccCchHHHHHHHHHHhCCCC-CEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCc
Confidence 64 4455532 22334445555 45555432 23333222222 256666666666666642 334445666
Q ss_pred CCCEEeCcCCccccc-cchhhcCCCCCCEEeCCCCCccccccccc-ccCCCCCeEEccC
Q 040849 540 RLEQLGMNGNFFQGN-IPSSFSSLRGIENLDLSRNNLSGRIPKYF-ENFLFLQNLNLSF 596 (809)
Q Consensus 540 ~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~LdLs~N~l~~~~p~~~-~~l~~L~~l~ls~ 596 (809)
+|++|+|++|.+++. ++..+..+++|+.|+|++|+++..-...+ ..++.+....+..
T Consensus 489 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 489 NLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp TCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECC
T ss_pred ccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecC
Confidence 677777777766544 33334556667777777776665432222 2345554444443
No 54
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=4e-29 Score=264.55 Aligned_cols=233 Identities=26% Similarity=0.275 Sum_probs=205.4
Q ss_pred ccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceec--CCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEE
Q 040849 370 TRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGR--IPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITL 447 (809)
Q Consensus 370 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 447 (809)
+++++|++++|++....+..|.++++|++|++++|.++.. .+..+..+++|++|++++|.+.+ +|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCcccc-ChhhcCCCCCCCEE
Confidence 4589999999999866666688999999999999998743 35667788999999999999884 56668889999999
Q ss_pred EcccccCcccCC-ccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcc-cCCCCccCCCCCCEEEcccc
Q 040849 448 SFDKNMLEGSIP-SSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNG-TLPSNFGILKNLGVLDVSEN 525 (809)
Q Consensus 448 ~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N 525 (809)
++++|++++..+ ..+..+++|++|++++|++++..|..+.+++++ ++|++++|++++ .+|..+..+++|++|+|++|
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n 185 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL-EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 185 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTC-CEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCC-CEEECCCCccccccchhHHhhCcCCCEEECCCC
Confidence 999999987665 678899999999999999998888888888998 789999999987 67889999999999999999
Q ss_pred ccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCC-CCCeEEccCCcccccCC
Q 040849 526 KLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFL-FLQNLNLSFNHFEGEVP 604 (809)
Q Consensus 526 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~-~L~~l~ls~N~l~g~~p 604 (809)
++++..|..|..+++|++|+|++|++++..+..|..+++|+.||+++|++++.+|..+..++ +|++|++++|++++..+
T Consensus 186 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 186 QLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred CcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 99988899999999999999999999988888899999999999999999999999999985 89999999999987654
No 55
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3.1e-29 Score=262.47 Aligned_cols=229 Identities=24% Similarity=0.255 Sum_probs=163.9
Q ss_pred cEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccc
Q 040849 373 RILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKN 452 (809)
Q Consensus 373 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 452 (809)
+.++.+++.+.. +|..+ .++|++|++++|.+++..+..|..+++|++|++++|++++..|..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 456666666653 34332 356777777777777666666777777777777777777666667777777777777777
Q ss_pred c-CcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEcccccccccc
Q 040849 453 M-LEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEI 531 (809)
Q Consensus 453 ~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 531 (809)
. +....|..+..+++|++|++++|++++..|..+.++++| ++|++++|++++..+..|..+++|++|+|++|++++..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAAL-QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCC-CEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 5 665556677777777777777777776666666677777 67777777777666666777777778888877777666
Q ss_pred CccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCC
Q 040849 532 PNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPI 605 (809)
Q Consensus 532 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 605 (809)
+..|..+++|++|++++|.+++..|..|.++++|+.|++++|++++..+..|..+++|++|++++|++.+..+.
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc
Confidence 66677777788888888887777777777777888888888888777667777777888888888877765553
No 56
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.8e-28 Score=274.35 Aligned_cols=232 Identities=24% Similarity=0.266 Sum_probs=214.0
Q ss_pred ccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEc
Q 040849 370 TRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSF 449 (809)
Q Consensus 370 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 449 (809)
+++++|++++|++++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|++
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 46999999999999999999999999999999999999999999999999999999999999888888999999999999
Q ss_pred ccccCcccCCccccCCCCCcEEeCcCCcCccccC-cchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccc
Q 040849 450 DKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIP-TEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLS 528 (809)
Q Consensus 450 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 528 (809)
++|++++..+..|.++++|+.|++++|+..+.++ ..+.++++| ++|++++|++++. | .+..+++|+.|+|++|+++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L-~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~ 231 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNL-KYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFP 231 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTC-CEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCS
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCC-CEEECCCCccccc-c-cccccccccEEECcCCcCc
Confidence 9999998888899999999999999954444554 468889999 8999999999965 4 5889999999999999999
Q ss_pred cccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCC
Q 040849 529 GEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVP 604 (809)
Q Consensus 529 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 604 (809)
+..|..|.++++|+.|+|++|++++..|..|.++++|+.|||++|++++..+..|..+++|+.|++++|++.+...
T Consensus 232 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 232 EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred ccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987654
No 57
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.7e-29 Score=271.49 Aligned_cols=280 Identities=16% Similarity=0.136 Sum_probs=164.2
Q ss_pred CCCCceEecCCCcceeeCCCCCCCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccc
Q 040849 291 ASHLMRLTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLST 370 (809)
Q Consensus 291 l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~ 370 (809)
++.....+.++++++.....+. ++|+.|++++|.+++. .+..+..++
T Consensus 30 C~~~~~c~~~~~~l~~iP~~~~--~~L~~L~l~~n~i~~~------------------------------~~~~~~~l~- 76 (353)
T 2z80_A 30 CDRNGICKGSSGSLNSIPSGLT--EAVKSLDLSNNRITYI------------------------------SNSDLQRCV- 76 (353)
T ss_dssp ECTTSEEECCSTTCSSCCTTCC--TTCCEEECTTSCCCEE------------------------------CTTTTTTCT-
T ss_pred CCCCeEeeCCCCCccccccccc--ccCcEEECCCCcCccc------------------------------CHHHhccCC-
Confidence 3444456666666664332222 3556666666655543 222333332
Q ss_pred cCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccC-cCCcCCCCccEEEc
Q 040849 371 RLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIP-SSIGNLTLLITLSF 449 (809)
Q Consensus 371 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L 449 (809)
+|++|++++|++++..|..|.++++|++|++++|++++..+..+.++++|++|++++|++++..+ ..+.++++|++|++
T Consensus 77 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l 156 (353)
T 2z80_A 77 NLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRV 156 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEE
T ss_pred CCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEEC
Confidence 25555555555555555555555555555555555554333345555555555555555553332 34555555666666
Q ss_pred ccc-cCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccc
Q 040849 450 DKN-MLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLS 528 (809)
Q Consensus 450 ~~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 528 (809)
++| .+.+..+..+.++++|++|++++|++++..|..+..++++ ++|++++|+++...+..+..+++|+.|++++|+++
T Consensus 157 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L-~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 157 GNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNV-SHLILHMKQHILLLEIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp EESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEE-EEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCT
T ss_pred CCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccC-CeecCCCCccccchhhhhhhcccccEEECCCCccc
Confidence 555 3444445555555566666666666555555555555555 55666666654333333344566666666666666
Q ss_pred cccCcccc---CCCCCCEEeCcCCcccc----ccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccc
Q 040849 529 GEIPNSLG---SCVRLEQLGMNGNFFQG----NIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEG 601 (809)
Q Consensus 529 ~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 601 (809)
+..+..+. ..+.++.++|++|.+++ .+|..+..+++|+.||+++|+++...+..|.++++|++|++++|++.|
T Consensus 236 ~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 236 TFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp TCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 55444332 35567777777777776 467788888888888888888885444446888888899999888888
Q ss_pred cCC
Q 040849 602 EVP 604 (809)
Q Consensus 602 ~~p 604 (809)
.+|
T Consensus 316 ~~~ 318 (353)
T 2z80_A 316 SCP 318 (353)
T ss_dssp CHH
T ss_pred cCC
Confidence 766
No 58
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=3.4e-28 Score=271.01 Aligned_cols=232 Identities=26% Similarity=0.300 Sum_probs=212.3
Q ss_pred ccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEc
Q 040849 370 TRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSF 449 (809)
Q Consensus 370 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 449 (809)
+.++.|+|++|++.+..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|++
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 45999999999999988899999999999999999999888899999999999999999999888888999999999999
Q ss_pred ccccCcccCCccccCCCCCcEEeCcCCcCccccC-cchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccc
Q 040849 450 DKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIP-TEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLS 528 (809)
Q Consensus 450 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 528 (809)
++|.+++..+..|.++++|+.|++++|+..+.++ ..+.++++| ++|++++|+++. +| .+..+++|+.|||++|+++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L-~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~ 220 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNL-RYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLS 220 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSC-CEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCC
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhccccc-CeecCCCCcCcc-cc-ccCCCcccCEEECCCCccC
Confidence 9999998888899999999999999955444454 468889999 799999999984 44 4889999999999999999
Q ss_pred cccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCC
Q 040849 529 GEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVP 604 (809)
Q Consensus 529 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 604 (809)
+..|..|.++++|+.|+|++|++++..|..|.++++|+.|||++|++++..+..|..+++|+.|++++|++.+...
T Consensus 221 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 221 AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred ccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987554
No 59
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.3e-30 Score=273.30 Aligned_cols=246 Identities=21% Similarity=0.225 Sum_probs=197.4
Q ss_pred cCCccEEeccccccccccchhhhhccccCcEEEccCCcc-cccCCcccc-------CCCCCCeeeCCCccceecCCccc-
Q 040849 344 ASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQL-FGNIPSGLR-------NLVNLERLLLEGNQFTGRIPGSI- 414 (809)
Q Consensus 344 ~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l-~~~~p~~l~-------~l~~L~~L~Ls~N~l~~~~p~~~- 414 (809)
.++|+.+++++|.+ .+|..+... |+.|++++|++ ...+|..+. ++++|++|+|++|++++.+|..+
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~---L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI---IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH---HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred CCCceeEeeccccc--ccHHHHHHH---HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 34566666667766 566655544 77888888888 445666555 78899999999999988888776
Q ss_pred -cCCCCCCEEEeeCCeeecccCcCCcCC-----CCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccc--cCcch
Q 040849 415 -GDLHKLQRLGLQGNKFLGEIPSSIGNL-----TLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGT--IPTEV 486 (809)
Q Consensus 415 -~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~p~~~ 486 (809)
..+++|++|++++|++++. |..+..+ ++|++|++++|++++..|..|.++++|++|++++|++.+. +|..+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 195 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH
Confidence 8889999999999998877 7777766 8899999999999888888899999999999999988765 33344
Q ss_pred --hcccCCceEEEccCCcCccc---CCCCccCCCCCCEEEccccccccccC-ccccCCCCCCEEeCcCCccccccchhhc
Q 040849 487 --IGLSSLSIYLDLSQNQLNGT---LPSNFGILKNLGVLDVSENKLSGEIP-NSLGSCVRLEQLGMNGNFFQGNIPSSFS 560 (809)
Q Consensus 487 --~~l~~l~~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 560 (809)
..+++| ++|++++|++++. ....+..+++|++|||++|++++.+| ..+..+++|++|+|++|+++ .+|..+.
T Consensus 196 ~~~~l~~L-~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 196 CPLKFPTL-QVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp CTTSCTTC-CEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred HhccCCCC-CEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 677888 7899999998832 22345678899999999999998775 55677899999999999998 7777776
Q ss_pred CCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccc
Q 040849 561 SLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEG 601 (809)
Q Consensus 561 ~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 601 (809)
++|+.|||++|++++. |. +..+++|++|++++|++++
T Consensus 274 --~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp --SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred --CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 8899999999999977 65 8899999999999999885
No 60
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.4e-28 Score=258.54 Aligned_cols=257 Identities=20% Similarity=0.214 Sum_probs=197.5
Q ss_pred CccEEeccccccccccchhhhhccccCcEEEccCCcccc--cCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEE
Q 040849 346 RLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFG--NIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRL 423 (809)
Q Consensus 346 ~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 423 (809)
+|+.|++++|.+....+..+..+ ++|++|++++|++.. ..|..+..+++|++|++++|.++ .+|..+..+++|++|
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKL-TQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTC-TTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCEEECCCCccCccCHhHhhcc-ccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 34444444444442222223333 347777887777763 23566777888888888888887 456668888888999
Q ss_pred EeeCCeeecccC-cCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCcc-ccCcchhcccCCceEEEccCC
Q 040849 424 GLQGNKFLGEIP-SSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTG-TIPTEVIGLSSLSIYLDLSQN 501 (809)
Q Consensus 424 ~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~l~~~L~Ls~N 501 (809)
++++|++++..+ ..+..+++|++|++++|.+.+..+..+..+++|++|++++|++++ .+|..+..+++| ++|++++|
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~Ls~n 185 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL-TFLDLSQC 185 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC-CEEECTTS
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCC-CEEECCCC
Confidence 999888887655 578888889999999999888888888888999999999999886 578888888888 78999999
Q ss_pred cCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCC-CCCEEeCCCCCcccccc
Q 040849 502 QLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLR-GIENLDLSRNNLSGRIP 580 (809)
Q Consensus 502 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~LdLs~N~l~~~~p 580 (809)
++++..|..+..+++|+.|+|++|++++..+..+..+++|++|++++|++++..|..+..++ +|+.|+|++|++++..+
T Consensus 186 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 186 QLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred CcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 99988888999999999999999999988888899999999999999999999999999984 89999999999987543
Q ss_pred c--ccccCCCCCeEEccCCcccccCCC
Q 040849 581 K--YFENFLFLQNLNLSFNHFEGEVPI 605 (809)
Q Consensus 581 ~--~~~~l~~L~~l~ls~N~l~g~~p~ 605 (809)
. ...-+...+.+.+..+.+.+..|.
T Consensus 266 ~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 266 HQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp GHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred hHHHHHHHHhhhhhhccccccccCCch
Confidence 1 112223344455556666666553
No 61
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.8e-30 Score=275.31 Aligned_cols=246 Identities=20% Similarity=0.223 Sum_probs=132.0
Q ss_pred CCCccEEeCCCCCCCccCCccccccccCCccccCCCcC-cccCCcccc-------CCCcCcEEEcccCCCCCCCcccc--
Q 040849 98 LSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTF-GGQIPDNIS-------HCVNLESLRLGFNELVGKVPRKL-- 167 (809)
Q Consensus 98 l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~l-- 167 (809)
.++|++|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..+
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 117 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLE 117 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSS
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHH
Confidence 34555555555555 455544443 55556665555 334444443 45556666666666555555544
Q ss_pred cCCCCCCEEEcccccCcccCCccCCCC-----CCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCC--cchhc-
Q 040849 168 GSLSKLRTLAVHYNNLSGQIPSSFGNL-----SSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGE--IPFSI- 239 (809)
Q Consensus 168 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~--~~~~l- 239 (809)
..+++|++|+|++|++++. |..++.+ ++|++|++++|++++..|..|+++++|++|++++|++.+. .+..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSC
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHH
Confidence 5555666666666655544 5444444 5566666666665555555555566666666666555543 22222
Q ss_pred -cCCCCCceeccCCccccc--ccChhhhcCCCCCcEEEccCccccccCC-cccccCCCCceEecCCCcceeeCCC-CCCC
Q 040849 240 -YNLSSLNYFEFPVNQLQG--SLPSDLGFTLPNLERLNLGENQFTGPIP-ASISNASHLMRLTIPINGFSGKVPS-FGNL 314 (809)
Q Consensus 240 -~~l~~L~~L~l~~n~l~~--~~p~~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~~~~~~-~~~l 314 (809)
..+++|++|++++|++++ .++..++..+++|++|++++|++++..| ..+..+++|+.|++++|+++ .+|. +.
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-- 273 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--
Confidence 555566666666665552 2333333345566666666666655443 33444556666666666665 3333 33
Q ss_pred CCCcEEEeccccCCCCCCCchhhhhcccccCCccEEecccccccc
Q 040849 315 HKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGG 359 (809)
Q Consensus 315 ~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~ 359 (809)
++|+.|++++|++++.. .+..+++|+.+++++|.+++
T Consensus 274 ~~L~~L~Ls~N~l~~~p--------~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 AKLSVLDLSYNRLDRNP--------SPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp SEEEEEECCSSCCCSCC--------CTTTSCEEEEEECTTCTTTC
T ss_pred CCceEEECCCCCCCCCh--------hHhhCCCCCEEeccCCCCCC
Confidence 55666666666665431 13345556666666665543
No 62
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=4.7e-28 Score=253.44 Aligned_cols=252 Identities=20% Similarity=0.199 Sum_probs=217.4
Q ss_pred EEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCC
Q 040849 349 LLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGN 428 (809)
Q Consensus 349 ~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 428 (809)
.++.+.+.+. .+|.. .+++|++|++++|++++..+..|..+++|++|++++|.+++..|..|.++++|++|++++|
T Consensus 15 ~~~c~~~~l~-~ip~~---~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 15 TTSCPQQGLQ-AVPVG---IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp EEECCSSCCS-SCCTT---CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred EEEcCcCCcc-cCCcC---CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 3444444443 23332 2346999999999999888889999999999999999999988999999999999999999
Q ss_pred e-eecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccC
Q 040849 429 K-FLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTL 507 (809)
Q Consensus 429 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~ 507 (809)
+ +.+..|..|..+++|++|++++|.+++..|..+.++++|++|++++|++++..+..+..+++| +.|++++|++++..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNL-THLFLHGNRISSVP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCCEEC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCc-cEEECCCCcccccC
Confidence 7 887778899999999999999999999889999999999999999999997767778889999 79999999999888
Q ss_pred CCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCC
Q 040849 508 PSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFL 587 (809)
Q Consensus 508 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~ 587 (809)
+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|++++..+..+..+++|+.|++++|+++...+.. .-..
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~ 248 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWA 248 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHH
Confidence 888999999999999999999999999999999999999999999988888999999999999999998765532 1112
Q ss_pred CCCeEEccCCcccccCCCC
Q 040849 588 FLQNLNLSFNHFEGEVPIK 606 (809)
Q Consensus 588 ~L~~l~ls~N~l~g~~p~~ 606 (809)
.++.+..+.|.+.+..|..
T Consensus 249 ~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HHHHCCSEECCCBEEESGG
T ss_pred HHHhcccccCccccCCchH
Confidence 3445557788888887753
No 63
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=3.6e-27 Score=263.69 Aligned_cols=249 Identities=24% Similarity=0.235 Sum_probs=222.4
Q ss_pred CcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEccc
Q 040849 372 LRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDK 451 (809)
Q Consensus 372 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 451 (809)
...++.+++.++. +|..+. +++++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLSE-VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcCc-cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 5678888888874 565553 6899999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccC-CcCcccCCCCccCCCCCCEEEccccccccc
Q 040849 452 NMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQ-NQLNGTLPSNFGILKNLGVLDVSENKLSGE 530 (809)
Q Consensus 452 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 530 (809)
|++++..+..|..+++|++|+|++|++++..+..+..+++| +.|++++ |.+....+..|..+++|++|+|++|++++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSL-MRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTC-CEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcc-cEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 99998888889999999999999999997667788899999 7999999 556555566799999999999999999954
Q ss_pred cCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCCC-CCC
Q 040849 531 IPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIK-GVF 609 (809)
Q Consensus 531 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~ 609 (809)
| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|++++|++++..+.. ..+
T Consensus 212 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 -P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp -C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred -c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 4 5889999999999999999999999999999999999999999999999999999999999999999655532 346
Q ss_pred CCCCcccccCCCCCCCC
Q 040849 610 SNSSAVSLDGNDNLCGG 626 (809)
Q Consensus 610 ~~~~~~~~~~n~~lc~~ 626 (809)
..+..+.+.+||..|..
T Consensus 290 ~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 290 RYLVELHLHHNPWNCDC 306 (452)
T ss_dssp TTCCEEECCSSCEECST
T ss_pred cCCCEEEccCCCcCCCC
Confidence 67788899999988853
No 64
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=3.7e-27 Score=262.64 Aligned_cols=249 Identities=24% Similarity=0.239 Sum_probs=223.0
Q ss_pred CcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEccc
Q 040849 372 LRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDK 451 (809)
Q Consensus 372 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 451 (809)
...++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 567888888887 4566554 6899999999999999999999999999999999999998889999999999999999
Q ss_pred ccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCC-cCcccCCCCccCCCCCCEEEccccccccc
Q 040849 452 NMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQN-QLNGTLPSNFGILKNLGVLDVSENKLSGE 530 (809)
Q Consensus 452 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 530 (809)
|++++..+..|..+++|++|+|++|++++..+..+..+++| +.|++++| .+....+..|..+++|++|+|++|+++ .
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L-~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~ 199 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSL-RRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-E 199 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTC-CEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-S
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCccc-CEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-c
Confidence 99998888889999999999999999997777789999999 79999995 555555668999999999999999999 5
Q ss_pred cCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCCC-CCC
Q 040849 531 IPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIK-GVF 609 (809)
Q Consensus 531 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~ 609 (809)
+| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..|.++++|+.|++++|++++..+.. ..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 55 4889999999999999999999999999999999999999999999999999999999999999999755532 346
Q ss_pred CCCCcccccCCCCCCCC
Q 040849 610 SNSSAVSLDGNDNLCGG 626 (809)
Q Consensus 610 ~~~~~~~~~~n~~lc~~ 626 (809)
..+..+.+.+||..|..
T Consensus 279 ~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 279 HHLERIHLHHNPWNCNC 295 (440)
T ss_dssp TTCCEEECCSSCEECSS
T ss_pred cCCCEEEcCCCCccCCC
Confidence 67788899999998853
No 65
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1e-27 Score=274.74 Aligned_cols=88 Identities=25% Similarity=0.375 Sum_probs=60.6
Q ss_pred CCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeC
Q 040849 394 VNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGL 473 (809)
Q Consensus 394 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 473 (809)
++|++|++++|++++ +| ..+++|++|++++|++++ +|. .+++|+.|++++|+|+ .+|..+.++++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 456666666666654 33 344667777777777763 443 4567777888888777 56777888888888888
Q ss_pred cCCcCccccCcchhccc
Q 040849 474 SNNNLTGTIPTEVIGLS 490 (809)
Q Consensus 474 s~N~l~~~~p~~~~~l~ 490 (809)
++|.+++.+|..+..++
T Consensus 292 ~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 292 EGNPLSERTLQALREIT 308 (622)
T ss_dssp CSCCCCHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHhcc
Confidence 88888877777665554
No 66
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=7.3e-27 Score=242.11 Aligned_cols=217 Identities=23% Similarity=0.276 Sum_probs=167.9
Q ss_pred CCCCcccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccC
Q 040849 60 RHFCQWKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQI 139 (809)
Q Consensus 60 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 139 (809)
.++|.|.|+.|+-. ..++.++++++.++. +|..+. +.|++|+|++|.+++..+..|+++++|++|+|++|.++...
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 47999999999643 456678888888884 666554 57889999999998777778888999999999999888666
Q ss_pred CccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCC
Q 040849 140 PDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLK 219 (809)
Q Consensus 140 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 219 (809)
+..|.++++|++|+|++|.+.+..+..|..+++|++|++++|++++..+..|..+++|++|++++|++++..+..|..++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 66678888899999998888877777788888888888888888877777788888888888888888877666788888
Q ss_pred CccEEEeecCcCCCCcchhccCCCCCceeccCCcccccccChhhhcCCCCCcEEEccCcccc
Q 040849 220 RMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFT 281 (809)
Q Consensus 220 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 281 (809)
+|+.|++++|.+++..+..+..+++|++|++++|+++ .+|...+..+++|+.|++++|.+.
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCC-cCCHHHhccccCCCEEEecCCCee
Confidence 8888888888887766666666666666666666666 333333335566666666666554
No 67
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2.5e-27 Score=251.78 Aligned_cols=238 Identities=21% Similarity=0.160 Sum_probs=148.1
Q ss_pred ccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEee
Q 040849 347 LELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQ 426 (809)
Q Consensus 347 L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 426 (809)
++..+++.+.+...++..+ ...++|++|++++|++++..|..+..+++|++|+|++|.+++..+ +..+++|++|+++
T Consensus 12 l~i~~ls~~~l~~~~~~~~-~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLR-QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEESCCTTTHHHHHHHHH-TTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred eeEeeccccchhhhHHHHh-ccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 4444555555543332222 223346777777777766666666777777777777777765544 6666777777777
Q ss_pred CCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCccc
Q 040849 427 GNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGT 506 (809)
Q Consensus 427 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~ 506 (809)
+|++++.. ..++|++|++++|++++..+.. +++|+.|++++|++++..|..+..++++ ++|++++|++++.
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~ 159 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRV-QYLDLKLNEIDTV 159 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSE-EEEECTTSCCCEE
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCC-CEEECCCCCCCcc
Confidence 77766433 2256777777777776554433 4566777777777766556666666666 5677777777666
Q ss_pred CCCCc-cCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCccccccccccc
Q 040849 507 LPSNF-GILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFEN 585 (809)
Q Consensus 507 ~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~ 585 (809)
.+..+ ..+++|++|+|++|++++..+ ...+++|++|+|++|++++..+ .+..+++|+.||+++|++++ +|..+..
T Consensus 160 ~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~~-l~~~~~~ 235 (317)
T 3o53_A 160 NFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRF 235 (317)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred cHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCcccc-hhhHhhc
Confidence 55554 356677777777777765422 2236667777777777765433 36666777777777777763 4556666
Q ss_pred CCCCCeEEccCCccc
Q 040849 586 FLFLQNLNLSFNHFE 600 (809)
Q Consensus 586 l~~L~~l~ls~N~l~ 600 (809)
+++|+.|++++|+++
T Consensus 236 l~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 236 SQNLEHFDLRGNGFH 250 (317)
T ss_dssp CTTCCEEECTTCCCB
T ss_pred CCCCCEEEccCCCcc
Confidence 677777777777766
No 68
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=6.5e-28 Score=256.24 Aligned_cols=249 Identities=18% Similarity=0.188 Sum_probs=213.8
Q ss_pred cccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCC
Q 040849 342 VNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQ 421 (809)
Q Consensus 342 ~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 421 (809)
..+++|+.|++++|.+.+..|..+..+.. |++|++++|++++..+ +..+++|++|++++|++++.. ..++|+
T Consensus 31 ~~~~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~ 102 (317)
T 3o53_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTK-LELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIE 102 (317)
T ss_dssp TTGGGCSEEECTTSCCCCCCHHHHTTCTT-CCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCC
T ss_pred ccCCCCCEEECcCCccCcCCHHHhhCCCc-CCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcC
Confidence 34567888888888888777777777754 9999999999987665 899999999999999998644 338999
Q ss_pred EEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchh-cccCCceEEEccC
Q 040849 422 RLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVI-GLSSLSIYLDLSQ 500 (809)
Q Consensus 422 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~l~~~L~Ls~ 500 (809)
+|++++|++++..+.. +++|++|++++|++++..+..+..+++|++|++++|++++..|..+. .++++ ++|++++
T Consensus 103 ~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L-~~L~L~~ 178 (317)
T 3o53_A 103 TLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTL-EHLNLQY 178 (317)
T ss_dssp EEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTC-CEEECTT
T ss_pred EEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcC-CEEECCC
Confidence 9999999999876654 57899999999999998888999999999999999999987777775 67888 8999999
Q ss_pred CcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcc-ccc
Q 040849 501 NQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLS-GRI 579 (809)
Q Consensus 501 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~-~~~ 579 (809)
|++++..+ ...+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+++ +.+
T Consensus 179 N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~ 254 (317)
T 3o53_A 179 NFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTL 254 (317)
T ss_dssp SCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHH
T ss_pred CcCccccc--ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCH
Confidence 99997633 3358999999999999995 4556999999999999999999 57888999999999999999999 888
Q ss_pred ccccccCCCCCeEEcc-CCcccccCCCC
Q 040849 580 PKYFENFLFLQNLNLS-FNHFEGEVPIK 606 (809)
Q Consensus 580 p~~~~~l~~L~~l~ls-~N~l~g~~p~~ 606 (809)
|..+..++.|+.++++ .+.++|..|..
T Consensus 255 ~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 255 RDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred HHHHhccccceEEECCCchhccCCchhc
Confidence 9999999999999999 55677766643
No 69
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=9.3e-28 Score=269.90 Aligned_cols=219 Identities=22% Similarity=0.188 Sum_probs=187.6
Q ss_pred cCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcc
Q 040849 371 RLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFD 450 (809)
Q Consensus 371 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 450 (809)
+|+.|++++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 59999999999998888889999999999999999987766 8899999999999999986543 2789999999
Q ss_pred cccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCcc-CCCCCCEEEcccccccc
Q 040849 451 KNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFG-ILKNLGVLDVSENKLSG 529 (809)
Q Consensus 451 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~ 529 (809)
+|.+++..+.. +++|+.|++++|++++..|..+..+++| +.|+|++|++++.+|..+. .+++|+.|+|++|.+++
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRV-QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSE-EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCC-CEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 99998776543 5789999999999998888888889998 7899999999988888776 78999999999999987
Q ss_pred ccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCccc-ccCC
Q 040849 530 EIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFE-GEVP 604 (809)
Q Consensus 530 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~-g~~p 604 (809)
..+ +..+++|+.|+|++|.+++.+|. |..+++|+.|||++|++++ +|..+..+++|+.|++++|++. +.+|
T Consensus 184 ~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 184 VKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp EEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred ccc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchH
Confidence 743 33589999999999999976554 8899999999999999996 6777888999999999999998 4443
No 70
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=6.3e-27 Score=263.15 Aligned_cols=236 Identities=18% Similarity=0.182 Sum_probs=175.6
Q ss_pred cCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEE
Q 040849 344 ASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRL 423 (809)
Q Consensus 344 ~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 423 (809)
+++|+.|++++|.+.+..|..+..++. |++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|++|
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTK-LELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTT-CCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCC-CCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 447888888888888777777766654 8888888888876655 7778888888888888875443 2778888
Q ss_pred EeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchh-cccCCceEEEccCCc
Q 040849 424 GLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVI-GLSSLSIYLDLSQNQ 502 (809)
Q Consensus 424 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~l~~~L~Ls~N~ 502 (809)
++++|.+++..+.. +++|+.|++++|.+++..|..+..+++|++|+|++|++++..|..+. .+++| +.|+|++|.
T Consensus 105 ~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L-~~L~Ls~N~ 180 (487)
T 3oja_A 105 HAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTL-EHLNLQYNF 180 (487)
T ss_dssp ECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTC-CEEECTTSC
T ss_pred ECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcc-cEEecCCCc
Confidence 88888887766543 46778888888888877777777788888888888888877777765 56777 678888888
Q ss_pred CcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcc-ccccc
Q 040849 503 LNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLS-GRIPK 581 (809)
Q Consensus 503 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~-~~~p~ 581 (809)
+++..+ +..+++|+.|+|++|++++. |..+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.++ +.+|.
T Consensus 181 l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 181 IYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred cccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 876633 33577888888888888754 4447778888888888888885 5667777888888888888877 66677
Q ss_pred ccccCCCCCeEEcc
Q 040849 582 YFENFLFLQNLNLS 595 (809)
Q Consensus 582 ~~~~l~~L~~l~ls 595 (809)
.+..++.|+.++++
T Consensus 257 ~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 257 FFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHTTCHHHHHHHHH
T ss_pred HHHhCCCCcEEecc
Confidence 77777766666665
No 71
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=2.8e-26 Score=238.70 Aligned_cols=210 Identities=22% Similarity=0.204 Sum_probs=158.7
Q ss_pred CCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeC
Q 040849 394 VNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGL 473 (809)
Q Consensus 394 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 473 (809)
++|++|++++|.+++..+..|.++++|++|++++|++++..+..|.++++|++|++++|.+++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 35666777777666666656666777777777777766666666666777777777777777666666777777777777
Q ss_pred cCCcCccccCcchhcccCCceEEEccCCcCccc-CCCCccCCCCCCEEEccccccccccCccccCCCCCC----EEeCcC
Q 040849 474 SNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGT-LPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLE----QLGMNG 548 (809)
Q Consensus 474 s~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~ 548 (809)
++|++++..+..+..+++| ++|++++|++++. +|..+..+++|++|+|++|++++..+..+..+++|+ .|++++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTL-KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTC-CEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCCccccCchhcccCCCC-CEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCC
Confidence 7777765555566667777 6777777777653 577788888888888888888877777777777776 899999
Q ss_pred CccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCC
Q 040849 549 NFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPI 605 (809)
Q Consensus 549 N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 605 (809)
|.+++..+..+.. .+|+.|++++|++++..+..|..+++|++|++++|++++..|.
T Consensus 187 n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 187 NPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp SCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred CcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 9998777666655 4799999999999988888889999999999999999987764
No 72
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=1e-25 Score=258.19 Aligned_cols=268 Identities=28% Similarity=0.308 Sum_probs=152.3
Q ss_pred CCceeccCCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCcceeeCCCCCCCCCCcEEEec
Q 040849 244 SLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSGKVPSFGNLHKLQWVSIS 323 (809)
Q Consensus 244 ~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls 323 (809)
.++.|++++|.++ .+|..++ ++|+.|++++|.++ .+|. .+++|+.|++++|.+++ +|. .+++|++|+++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~---~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV--LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC---TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC--CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC---CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC--CCCCCCEEECc
Confidence 3556666666665 5555432 45666666666655 2333 34455555555555543 222 33444444444
Q ss_pred cccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCC
Q 040849 324 MNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEG 403 (809)
Q Consensus 324 ~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~ 403 (809)
+|.+++. |. ..++|+.|++++|++++ +|.. +++|++|++++
T Consensus 110 ~N~l~~l-------------------------------~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~ 150 (622)
T 3g06_A 110 SNPLTHL-------------------------------PA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSD 150 (622)
T ss_dssp SCCCCCC-------------------------------CC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCS
T ss_pred CCcCCCC-------------------------------CC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcC
Confidence 4444332 11 12346666666666664 3332 36666777777
Q ss_pred ccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccC
Q 040849 404 NQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIP 483 (809)
Q Consensus 404 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 483 (809)
|++++ +|. .+++|+.|++++|++++ +| ..+++|+.|++++|.+++ +|.. +++|+.|++++|+++ .+|
T Consensus 151 N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~ 217 (622)
T 3g06_A 151 NQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLP 217 (622)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCC
T ss_pred CcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccC
Confidence 76663 232 23566667777776664 33 335666677777776664 3322 356667777777666 344
Q ss_pred cchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCC
Q 040849 484 TEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLR 563 (809)
Q Consensus 484 ~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 563 (809)
.. .++| +.|++++|++++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|.+++
T Consensus 218 ~~---~~~L-~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~ 284 (622)
T 3g06_A 218 AL---PSGL-KELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLS 284 (622)
T ss_dssp CC---CTTC-CEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSC
T ss_pred CC---CCCC-CEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhcc
Confidence 32 2445 566777776664 33 34466777777777776 3444 4566777777777777 5566677777
Q ss_pred CCCEEeCCCCCcccccccccccCC
Q 040849 564 GIENLDLSRNNLSGRIPKYFENFL 587 (809)
Q Consensus 564 ~L~~LdLs~N~l~~~~p~~~~~l~ 587 (809)
+|+.|+|++|++++.+|..+..++
T Consensus 285 ~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 285 SETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ccCEEEecCCCCCCcCHHHHHhcc
Confidence 777777777777777666665543
No 73
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=2.9e-29 Score=291.62 Aligned_cols=443 Identities=16% Similarity=0.104 Sum_probs=227.5
Q ss_pred cEEeCCCCCCCccCCccccccccCCccccCCCcCcc---cCCcc------------ccCCCcCcEEEcccCCCCCCCccc
Q 040849 102 RVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGG---QIPDN------------ISHCVNLESLRLGFNELVGKVPRK 166 (809)
Q Consensus 102 ~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~p~~------------~~~l~~L~~L~Ls~N~l~~~~p~~ 166 (809)
+.++++..... ..+..+.++++|++|+|+++.... ..|.. ...+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 35666554322 223346778889999998875321 12221 234667777777777766555555
Q ss_pred cc-CCCCCCEEEcccc-cCccc-CCccCCCCCCCCEEEcccCcccccCccccc----CCCCccEEEeecCcCCCCcchhc
Q 040849 167 LG-SLSKLRTLAVHYN-NLSGQ-IPSSFGNLSSLEVLSASANQFVGQIPKTLS----QLKRMRFIGFGVNKLSGEIPFSI 239 (809)
Q Consensus 167 l~-~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~----~l~~L~~L~L~~n~l~~~~~~~l 239 (809)
+. .+++|++|+|++| .++.. ++..+.++++|++|++++|.+++..+..+. .+++|+.|++++|. .......+
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l 203 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSAL 203 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHH
Confidence 54 4667777777766 44322 333344566777777777766554433332 44456666665554 11101111
Q ss_pred cCCCCCceeccCCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCc-------ceeeCCCCC
Q 040849 240 YNLSSLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPING-------FSGKVPSFG 312 (809)
Q Consensus 240 ~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~-------l~~~~~~~~ 312 (809)
..+...+++|++|++++|...+.+|..+..+++|+.|+++.+. +.+..+.+.
T Consensus 204 ---------------------~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~ 262 (594)
T 2p1m_B 204 ---------------------ERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALS 262 (594)
T ss_dssp ---------------------HHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHH
T ss_pred ---------------------HHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHh
Confidence 1111123445555555442111234444444444444433221 111111123
Q ss_pred CCCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhhhhccccCcEEEccCCcccccCC-cccc
Q 040849 313 NLHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIP-SGLR 391 (809)
Q Consensus 313 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p-~~l~ 391 (809)
++++|+.+. .+... -.+.+|..+..+ ++|+.|++++|.+++... ..+.
T Consensus 263 ~~~~L~~Ls-----------------------------~~~~~-~~~~l~~~~~~~-~~L~~L~L~~~~l~~~~l~~~~~ 311 (594)
T 2p1m_B 263 GCKELRCLS-----------------------------GFWDA-VPAYLPAVYSVC-SRLTTLNLSYATVQSYDLVKLLC 311 (594)
T ss_dssp TCTTCCEEE-----------------------------CCBTC-CGGGGGGGHHHH-TTCCEEECTTCCCCHHHHHHHHT
T ss_pred cCCCccccc-----------------------------CCccc-chhhHHHHHHhh-CCCCEEEccCCCCCHHHHHHHHh
Confidence 333333331 11110 011122222222 235555555555443211 1234
Q ss_pred CCCCCCeeeCCCcccee-cCCccccCCCCCCEEEeeC---------CeeecccCcCCc-CCCCccEEEcccccCcccCCc
Q 040849 392 NLVNLERLLLEGNQFTG-RIPGSIGDLHKLQRLGLQG---------NKFLGEIPSSIG-NLTLLITLSFDKNMLEGSIPS 460 (809)
Q Consensus 392 ~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~---------N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~ 460 (809)
.+++|++|++++| ++. .++.....+++|++|++++ +.+++.....+. .+++|+.|++..|.+++..+.
T Consensus 312 ~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~ 390 (594)
T 2p1m_B 312 QCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALI 390 (594)
T ss_dssp TCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHH
T ss_pred cCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHH
Confidence 5555555555555 221 1111222355566665522 333322222222 255666666666666554444
Q ss_pred ccc-CCCCCcEEeCc--C----CcCcc-----ccCcchhcccCCceEEEccCCcCcccCCCCccC-CCCCCEEEcccccc
Q 040849 461 SLG-KCQNLILLGLS--N----NNLTG-----TIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGI-LKNLGVLDVSENKL 527 (809)
Q Consensus 461 ~l~-~l~~L~~L~Ls--~----N~l~~-----~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l 527 (809)
.+. .+++|+.|+++ + |++++ .++..+..+++| +.|++++ .+++..+..+.. +++|+.|+|++|.+
T Consensus 391 ~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L-~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i 468 (594)
T 2p1m_B 391 TIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDL-RRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGD 468 (594)
T ss_dssp HHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTC-CEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCS
T ss_pred HHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCc-cEEeecC-cccHHHHHHHHHhchhccEeeccCCCC
Confidence 443 35666666666 3 34441 112224455666 6777766 555443334443 77888888888888
Q ss_pred ccccCccc-cCCCCCCEEeCcCCccccccch-hhcCCCCCCEEeCCCCCccccccccc-ccCCCCCeEEccCCcccc
Q 040849 528 SGEIPNSL-GSCVRLEQLGMNGNFFQGNIPS-SFSSLRGIENLDLSRNNLSGRIPKYF-ENFLFLQNLNLSFNHFEG 601 (809)
Q Consensus 528 ~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~LdLs~N~l~~~~p~~~-~~l~~L~~l~ls~N~l~g 601 (809)
++..+..+ .++++|++|+|++|.+++..+. ....+++|+.|++++|+++......+ ..++.|+...+..+....
T Consensus 469 ~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~~ 545 (594)
T 2p1m_B 469 SDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPD 545 (594)
T ss_dssp SHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCGG
T ss_pred cHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCccc
Confidence 76666555 6688899999999988665544 34557889999999998865544444 567777777777665443
No 74
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2e-25 Score=232.34 Aligned_cols=209 Identities=21% Similarity=0.239 Sum_probs=188.8
Q ss_pred ccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEc
Q 040849 370 TRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSF 449 (809)
Q Consensus 370 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 449 (809)
++|++|++++|++++..+..+.++++|++|++++|++++..+..|.++++|++|++++|++++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 45999999999999888888999999999999999999888889999999999999999999888899999999999999
Q ss_pred ccccCcccCCccccCCCCCcEEeCcCCcCccc-cCcchhcccCCceEEEccCCcCcccCCCCccCCCCCC----EEEccc
Q 040849 450 DKNMLEGSIPSSLGKCQNLILLGLSNNNLTGT-IPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLG----VLDVSE 524 (809)
Q Consensus 450 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~ 524 (809)
++|.+.+..+..+..+++|++|++++|++++. +|..+..+++| +.|++++|++++..+..+..+++|+ .|++++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNL-EHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTC-CEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCC-CEEECCCCCCCcCCHHHhhhhhhccccceeeecCC
Confidence 99999988887899999999999999999863 68999999999 7999999999988888888777777 899999
Q ss_pred cccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccc
Q 040849 525 NKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIP 580 (809)
Q Consensus 525 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p 580 (809)
|++++..+..+.. .+|++|++++|++++..+..|..+++|+.|++++|++++..|
T Consensus 187 n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 187 NPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 9999776666654 589999999999998888888999999999999999997654
No 75
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=7.6e-25 Score=226.93 Aligned_cols=205 Identities=23% Similarity=0.255 Sum_probs=145.1
Q ss_pred CCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcC
Q 040849 396 LERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSN 475 (809)
Q Consensus 396 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 475 (809)
.+.++++++.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++...+..|.++++|++|++++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 445555555555 2343332 4556666666666555555566666666666666666655455556666666666666
Q ss_pred CcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCcccccc
Q 040849 476 NNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNI 555 (809)
Q Consensus 476 N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 555 (809)
|++++..+..+.++++| ++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..
T Consensus 95 n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNL-AELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SCCCCCCTTTTTTCSSC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CcCCcCCHhHcccccCC-CEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 66665444555666666 56777777777666777788888888888888888766677888888888888888888877
Q ss_pred chhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCC
Q 040849 556 PSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVP 604 (809)
Q Consensus 556 p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 604 (809)
+..|.++++|+.|++++|++++..+..|..+++|+.|++++|++.+..+
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 7778888888999999998888777778888889999999888876544
No 76
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=5.1e-28 Score=281.12 Aligned_cols=378 Identities=13% Similarity=0.079 Sum_probs=232.0
Q ss_pred CCCCCEEEcccCcccccCccccc-CCCCccEEEeecC-cCCCC-cchhccCCCCCceeccCCcccccccChhh---hcCC
Q 040849 194 LSSLEVLSASANQFVGQIPKTLS-QLKRMRFIGFGVN-KLSGE-IPFSIYNLSSLNYFEFPVNQLQGSLPSDL---GFTL 267 (809)
Q Consensus 194 l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~L~~n-~l~~~-~~~~l~~l~~L~~L~l~~n~l~~~~p~~~---~~~l 267 (809)
+++|++|++++|.+++..+..+. .+++|+.|++++| .++.. ++..+.++++|++|++++|.+++..+..+ ...+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 33444444444444433333332 3444444444444 22211 12222234444444444444333222211 1245
Q ss_pred CCCcEEEccCcc--cccc-CCcccccCCCCceEecCCC-cceeeCCC-CCCCCCCcEEEeccccCCCCCCCchhhhhccc
Q 040849 268 PNLERLNLGENQ--FTGP-IPASISNASHLMRLTIPIN-GFSGKVPS-FGNLHKLQWVSISMNHLGNGEKDDLEFVNSLV 342 (809)
Q Consensus 268 ~~L~~L~Ls~N~--l~~~-~p~~l~~l~~L~~L~l~~n-~l~~~~~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~ 342 (809)
++|++|++++|. ++.. ++..+..+++|+.|++++| .+.+ ++. +..+++|+.|+++.+...
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~-------------- 248 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAE-------------- 248 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCC--------------
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCc--------------
Confidence 677777777765 2111 1112234566777777666 2222 222 444455555554332210
Q ss_pred ccCCccEEeccccccccccchhhhhccccCcEE-EccCCcccccCCccccCCCCCCeeeCCCccceecCC-ccccCCCCC
Q 040849 343 NASRLELLGININNFGGMLPEAVGNLSTRLRIL-RVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIP-GSIGDLHKL 420 (809)
Q Consensus 343 ~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L-~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L 420 (809)
+..+.+.+ ++..+..+. +|+.| .+.+... +.++..+..+++|++|++++|.+++... ..+..+++|
T Consensus 249 ---------~~~~~~~~-l~~~l~~~~-~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L 316 (594)
T 2p1m_B 249 ---------VRPDVYSG-LSVALSGCK-ELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKL 316 (594)
T ss_dssp ---------CCHHHHHH-HHHHHHTCT-TCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTC
T ss_pred ---------cchhhHHH-HHHHHhcCC-CcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCc
Confidence 22233333 333555554 48888 4444332 3456666688999999999999875433 235689999
Q ss_pred CEEEeeCCeeecc-cCcCCcCCCCccEEEcc---------cccCcccCCcccc-CCCCCcEEeCcCCcCccccCcchh-c
Q 040849 421 QRLGLQGNKFLGE-IPSSIGNLTLLITLSFD---------KNMLEGSIPSSLG-KCQNLILLGLSNNNLTGTIPTEVI-G 488 (809)
Q Consensus 421 ~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~---------~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~-~ 488 (809)
++|++++| +... ++.....+++|++|++. .+.+++.....+. .+++|+.|+++.|++++..+..+. .
T Consensus 317 ~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~ 395 (594)
T 2p1m_B 317 QRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARN 395 (594)
T ss_dssp CEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred CEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhh
Confidence 99999999 4432 22233458899999994 3556544333333 489999999999999876666665 4
Q ss_pred ccCCceEEEcc--C----CcCccc-----CCCCccCCCCCCEEEccccccccccCccccC-CCCCCEEeCcCCccccccc
Q 040849 489 LSSLSIYLDLS--Q----NQLNGT-----LPSNFGILKNLGVLDVSENKLSGEIPNSLGS-CVRLEQLGMNGNFFQGNIP 556 (809)
Q Consensus 489 l~~l~~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p 556 (809)
+++| +.|+++ + |.++.. ++..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+
T Consensus 396 ~~~L-~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~ 473 (594)
T 2p1m_B 396 RPNM-TRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGM 473 (594)
T ss_dssp CTTC-CEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHH
T ss_pred CCCc-ceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHH
Confidence 7888 799999 4 566532 122256789999999988 777777777766 8999999999999988766
Q ss_pred hhh-cCCCCCCEEeCCCCCccccccc-ccccCCCCCeEEccCCcccc
Q 040849 557 SSF-SSLRGIENLDLSRNNLSGRIPK-YFENFLFLQNLNLSFNHFEG 601 (809)
Q Consensus 557 ~~~-~~l~~L~~LdLs~N~l~~~~p~-~~~~l~~L~~l~ls~N~l~g 601 (809)
..+ .++++|+.|+|++|++++..+. ....+++|++|++++|+++.
T Consensus 474 ~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 474 HHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp HHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred HHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 666 7799999999999999765554 44568999999999999853
No 77
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.5e-24 Score=226.56 Aligned_cols=205 Identities=23% Similarity=0.219 Sum_probs=162.3
Q ss_pred ccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCc
Q 040849 390 LRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLI 469 (809)
Q Consensus 390 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 469 (809)
+.++++++++++++|.++ .+|..+. ++++.|++++|++++..|..|..+++|++|++++|.+++..+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 566777788888887777 4454443 5778888888888777777788888888888888888765443 6778888
Q ss_pred EEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCC
Q 040849 470 LLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGN 549 (809)
Q Consensus 470 ~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 549 (809)
+|++++|+++ .+|..+.+++++ +.|++++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L-~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPAL-TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTC-CEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCC-cCchhhccCCCC-CEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 8888888887 677777778888 68888888888777778888888888888888888777777888888888888888
Q ss_pred ccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCccccc
Q 040849 550 FFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGE 602 (809)
Q Consensus 550 ~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~ 602 (809)
++++..+..|..+++|+.|+|++|+++ .+|..+..+..|+.+++++|++.+.
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 888777777888888888888888888 5667777778888888888887653
No 78
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=2.3e-25 Score=231.02 Aligned_cols=221 Identities=23% Similarity=0.236 Sum_probs=179.8
Q ss_pred CcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEccc
Q 040849 372 LRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDK 451 (809)
Q Consensus 372 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 451 (809)
+..+++..+.+... .....+++|+.|++++|.++. + ..+..+++|++|++++|++.+. ..+..+++|++|++++
T Consensus 21 l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 21 TIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTT
T ss_pred HHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCC
Confidence 34455555555433 335567788888888887763 2 3477788888888888888763 3677888888888888
Q ss_pred ccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEcccccccccc
Q 040849 452 NMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEI 531 (809)
Q Consensus 452 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 531 (809)
|.+++..+..+.++++|++|++++|++++..+..+..+++| ++|++++|++++..+..+..+++|+.|++++|++++..
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 173 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNL-TYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLP 173 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCC-CEEECCCCccCccCHHHhccCccCCEEECCCCCcCccC
Confidence 88887777778888888888888888887666667788888 78889888888877778889999999999999999888
Q ss_pred CccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCCC
Q 040849 532 PNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIK 606 (809)
Q Consensus 532 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~ 606 (809)
+..|..+++|+.|++++|++++..|..|..+++|+.|++++|++.+.. +.|+.++++.|+++|.+|..
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~-------~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC-------PGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT-------TTTHHHHHHHHHTGGGBBCT
T ss_pred HHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccC-------cHHHHHHHHHHhCCCcccCc
Confidence 888899999999999999999988888999999999999999988654 46888999999999999864
No 79
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.6e-24 Score=224.60 Aligned_cols=205 Identities=24% Similarity=0.259 Sum_probs=181.1
Q ss_pred cCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcc
Q 040849 371 RLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFD 450 (809)
Q Consensus 371 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 450 (809)
+|+.|++++|.+.. ...+..+++|++|++++|.+++. ..+..+++|++|++++|++++..+..|.++++|++|+++
T Consensus 42 ~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 117 (272)
T 3rfs_A 42 SIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117 (272)
T ss_dssp TCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred ceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECC
Confidence 48888888888874 23588899999999999999863 478899999999999999998888888999999999999
Q ss_pred cccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccc
Q 040849 451 KNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGE 530 (809)
Q Consensus 451 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 530 (809)
+|++++..+..|..+++|++|++++|++++..+..+..+++| +.|++++|++++..+..+..+++|+.|++++|++++.
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (272)
T 3rfs_A 118 ENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNL-TELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSV 196 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccC-CEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCcc
Confidence 999998888889999999999999999997777777888999 7999999999988888889999999999999999998
Q ss_pred cCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCC
Q 040849 531 IPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFL 587 (809)
Q Consensus 531 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~ 587 (809)
.|..+..+++|+.|++++|++.+.. ++|+.|+++.|+++|.+|..++.+.
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~~~~-------~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 197 PDGVFDRLTSLQYIWLHDNPWDCTC-------PGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCT-------TTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred CHHHHhCCcCCCEEEccCCCccccC-------cHHHHHHHHHHhCCCcccCcccccC
Confidence 8888999999999999999998654 4688999999999999999887654
No 80
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=2.4e-24 Score=220.54 Aligned_cols=192 Identities=20% Similarity=0.198 Sum_probs=156.0
Q ss_pred CCCcccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCC
Q 040849 61 HFCQWKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIP 140 (809)
Q Consensus 61 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 140 (809)
+||.|.|++|.. ..+.++++++.++ .+|..+. +.++.|+|++|.+++..+..|+++++|++|+|++|.+++..|
T Consensus 3 ~Cp~~~gC~C~~---~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNE---GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEG---GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCC---CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 689999999953 2335788888887 4566554 588999999999988888888999999999999999988888
Q ss_pred ccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCC
Q 040849 141 DNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKR 220 (809)
Q Consensus 141 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 220 (809)
..|.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|++++..+..|..+++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 88888999999999999988777778888889999999999888777777888888888888888888777777888888
Q ss_pred ccEEEeecCcCCCCcchhccCCCCCceeccCCcccccc
Q 040849 221 MRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQLQGS 258 (809)
Q Consensus 221 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 258 (809)
|++|++++|++++..+..+..+++|+.|++++|.+.+.
T Consensus 157 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 88888888888877766677777777777777766543
No 81
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=1.2e-24 Score=230.32 Aligned_cols=201 Identities=20% Similarity=0.182 Sum_probs=109.1
Q ss_pred CcEEEccCCcccccCCccc--cCCCCCCeeeCCCccceecCC----ccccCCCCCCEEEeeCCeeecccCcCCcCCCCcc
Q 040849 372 LRILRVGNNQLFGNIPSGL--RNLVNLERLLLEGNQFTGRIP----GSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLI 445 (809)
Q Consensus 372 L~~L~Ls~n~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 445 (809)
|++|++++|++.+..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++.+..|..|..+++|+
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 172 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALT 172 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCC
Confidence 6666666666665555555 556666666666666554333 2233455555555555555555555555555555
Q ss_pred EEEcccccCccc---C-CccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCC-CccCCCCCCEE
Q 040849 446 TLSFDKNMLEGS---I-PSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPS-NFGILKNLGVL 520 (809)
Q Consensus 446 ~L~L~~N~l~~~---~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L 520 (809)
+|++++|++.+. . +..+..+++|++|+|++|+++ .++.. +. .+..+++|++|
T Consensus 173 ~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~----------------------~~~l~~~l~~L~~L 229 (310)
T 4glp_A 173 SLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGV----------------------CAALAAAGVQPHSL 229 (310)
T ss_dssp EEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHH----------------------HHHHHHHTCCCSSE
T ss_pred EEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHH----------------------HHHHHhcCCCCCEE
Confidence 555555554431 1 122244555555555555554 11111 00 12344555666
Q ss_pred EccccccccccCccccCC---CCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCC
Q 040849 521 DVSENKLSGEIPNSLGSC---VRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFN 597 (809)
Q Consensus 521 ~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N 597 (809)
||++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|||++|++++. |. +..+++|+.|++++|
T Consensus 230 ~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N 304 (310)
T 4glp_A 230 DLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGN 304 (310)
T ss_dssp ECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSST
T ss_pred ECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCC
Confidence 666666655555555554 46666666666666 4455443 5666666666666653 22 455666777777777
Q ss_pred ccc
Q 040849 598 HFE 600 (809)
Q Consensus 598 ~l~ 600 (809)
+++
T Consensus 305 ~l~ 307 (310)
T 4glp_A 305 PFL 307 (310)
T ss_dssp TTS
T ss_pred CCC
Confidence 665
No 82
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.2e-23 Score=213.72 Aligned_cols=196 Identities=18% Similarity=0.185 Sum_probs=123.3
Q ss_pred CCCeeeCCCccceecCCccccCCCCCCEEEeeCCe-eecccCcCCcCCCCccEEEccc-ccCcccCCccccCCCCCcEEe
Q 040849 395 NLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNK-FLGEIPSSIGNLTLLITLSFDK-NMLEGSIPSSLGKCQNLILLG 472 (809)
Q Consensus 395 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~ 472 (809)
+|++|++++|++++..+..|.++++|++|++++|+ +++..+..|.++++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 55555555555555555555555666666666664 5544444555566666666665 566555555556666666666
Q ss_pred CcCCcCccccCcchhcccCCce---EEEccCC-cCcccCCCCccCCCCCC-EEEccccccccccCccccCCCCCCEEeCc
Q 040849 473 LSNNNLTGTIPTEVIGLSSLSI---YLDLSQN-QLNGTLPSNFGILKNLG-VLDVSENKLSGEIPNSLGSCVRLEQLGMN 547 (809)
Q Consensus 473 Ls~N~l~~~~p~~~~~l~~l~~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 547 (809)
+++|++++ +|. +..++++ + .|++++| ++++..+..|..+++|+ .|++++|+++...+..|.. ++|+.|+++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L-~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYST-DIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBC-CSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred CCCCCCcc-ccc-ccccccc-ccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 66666653 444 4455555 3 6677777 66666666677777777 7777777777333333444 677778888
Q ss_pred CCc-cccccchhhcCC-CCCCEEeCCCCCcccccccccccCCCCCeEEccCC
Q 040849 548 GNF-FQGNIPSSFSSL-RGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFN 597 (809)
Q Consensus 548 ~N~-l~~~~p~~~~~l-~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N 597 (809)
+|+ +++..+..|.++ ++|+.||+++|++++..+. .+++|+.|+++++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 774 776667777777 7788888888887754433 4567777777765
No 83
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=3.7e-23 Score=216.03 Aligned_cols=205 Identities=25% Similarity=0.247 Sum_probs=181.4
Q ss_pred cccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCC
Q 040849 413 SIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSL 492 (809)
Q Consensus 413 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l 492 (809)
.+.++++++.+++++|.++. +|..+. +.++.|++++|.+++..|..|..+++|++|++++|++++..+ . ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTC
T ss_pred cccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcC
Confidence 36778999999999999984 555553 689999999999999989999999999999999999996433 3 678888
Q ss_pred ceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCC
Q 040849 493 SIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSR 572 (809)
Q Consensus 493 ~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~ 572 (809)
+.|++++|+++ .+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++
T Consensus 80 -~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 80 -GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp -CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred -CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCC
Confidence 89999999998 6788899999999999999999988889999999999999999999998888899999999999999
Q ss_pred CCcccccccccccCCCCCeEEccCCcccccCCCC-CCCCCCCcccccCCCCCCC
Q 040849 573 NNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPIK-GVFSNSSAVSLDGNDNLCG 625 (809)
Q Consensus 573 N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~lc~ 625 (809)
|++++..+..|..+++|++|++++|+++ .+|.. .....+..+.+.+||+.|.
T Consensus 158 N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 158 NNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 9999888888999999999999999999 45543 3344577788899999885
No 84
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=4.3e-25 Score=241.65 Aligned_cols=231 Identities=21% Similarity=0.262 Sum_probs=176.4
Q ss_pred CcEEEccCCcccccCC----ccccCCCCCCeeeCCCc---cceecCCccc-------cCCCCCCEEEeeCCeeec----c
Q 040849 372 LRILRVGNNQLFGNIP----SGLRNLVNLERLLLEGN---QFTGRIPGSI-------GDLHKLQRLGLQGNKFLG----E 433 (809)
Q Consensus 372 L~~L~Ls~n~l~~~~p----~~l~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~Ls~N~l~~----~ 433 (809)
|+.|++++|++.+..+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|++.+ .
T Consensus 34 L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~ 113 (386)
T 2ca6_A 34 VKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEP 113 (386)
T ss_dssp CCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHH
T ss_pred ccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHH
Confidence 6666666666665432 33556777777777774 4444555443 677888888888888776 4
Q ss_pred cCcCCcCCCCccEEEcccccCcccCCcccc----CC---------CCCcEEeCcCCcCc-cccC---cchhcccCCceEE
Q 040849 434 IPSSIGNLTLLITLSFDKNMLEGSIPSSLG----KC---------QNLILLGLSNNNLT-GTIP---TEVIGLSSLSIYL 496 (809)
Q Consensus 434 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~----~l---------~~L~~L~Ls~N~l~-~~~p---~~~~~l~~l~~~L 496 (809)
+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|++++|+++ +.+| ..+..+++| +.|
T Consensus 114 l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L-~~L 192 (386)
T 2ca6_A 114 LIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL-HTV 192 (386)
T ss_dssp HHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTC-CEE
T ss_pred HHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCc-CEE
Confidence 666777788888888888888654443333 33 78999999999987 4445 456677788 789
Q ss_pred EccCCcCc--c---cCCCCccCCCCCCEEEccccccc----cccCccccCCCCCCEEeCcCCccccc----cchhhcC--
Q 040849 497 DLSQNQLN--G---TLPSNFGILKNLGVLDVSENKLS----GEIPNSLGSCVRLEQLGMNGNFFQGN----IPSSFSS-- 561 (809)
Q Consensus 497 ~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~-- 561 (809)
++++|+++ | ..|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+|++|.+++. +|..+..
T Consensus 193 ~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~ 272 (386)
T 2ca6_A 193 KMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLE 272 (386)
T ss_dssp ECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCS
T ss_pred ECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhcc
Confidence 99999887 3 35557888999999999999996 67888899999999999999999876 6777744
Q ss_pred CCCCCEEeCCCCCccc----cccccc-ccCCCCCeEEccCCcccccC
Q 040849 562 LRGIENLDLSRNNLSG----RIPKYF-ENFLFLQNLNLSFNHFEGEV 603 (809)
Q Consensus 562 l~~L~~LdLs~N~l~~----~~p~~~-~~l~~L~~l~ls~N~l~g~~ 603 (809)
+++|+.|+|++|++++ .+|..+ .++++|++|++++|++++..
T Consensus 273 ~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 273 NIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp SCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 8999999999999998 578777 67899999999999988644
No 85
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=2.3e-25 Score=241.24 Aligned_cols=252 Identities=15% Similarity=0.145 Sum_probs=176.5
Q ss_pred EeccccccccccchhhhhccccCcEEEccCCcccccCC----ccccCCC-CCCeeeCCCccceecCCccccCC-----CC
Q 040849 350 LGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIP----SGLRNLV-NLERLLLEGNQFTGRIPGSIGDL-----HK 419 (809)
Q Consensus 350 L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p----~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 419 (809)
..++.|.+++.+|..+.. +.+|++|++++|.+.+..+ ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 3 ~~ls~n~~~~~~~~~~~~-~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSI-PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHHHTS-CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHHHHhC-CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 455666666666655443 3448888888888876666 6677777 78888888888877666666554 78
Q ss_pred CCEEEeeCCeeecccCcCC----cCC-CCccEEEcccccCcccCCcccc----C-CCCCcEEeCcCCcCcccc----Ccc
Q 040849 420 LQRLGLQGNKFLGEIPSSI----GNL-TLLITLSFDKNMLEGSIPSSLG----K-CQNLILLGLSNNNLTGTI----PTE 485 (809)
Q Consensus 420 L~~L~Ls~N~l~~~~p~~~----~~l-~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~Ls~N~l~~~~----p~~ 485 (809)
|++|+|++|++++..+..+ ..+ ++|++|++++|.+++..+..+. . .++|++|+|++|++++.. +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 8888888888876655543 333 7888888888888766554433 3 358888888888887533 333
Q ss_pred hhccc-CCceEEEccCCcCcccCCCCcc----CC-CCCCEEEccccccccc----cCccccC-CCCCCEEeCcCCccccc
Q 040849 486 VIGLS-SLSIYLDLSQNQLNGTLPSNFG----IL-KNLGVLDVSENKLSGE----IPNSLGS-CVRLEQLGMNGNFFQGN 554 (809)
Q Consensus 486 ~~~l~-~l~~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~ 554 (809)
+...+ ++ +.|+|++|++++..+..+. .. ++|++|||++|++++. ++..+.. .++|++|+|++|.+++.
T Consensus 162 l~~~~~~L-~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 162 LAAIPANV-NSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp HHTSCTTC-CEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HhcCCccc-cEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 44444 66 7888888888766554333 34 5888888888888863 4555555 35888889988888876
Q ss_pred cc----hhhcCCCCCCEEeCCCCCccccc-------ccccccCCCCCeEEccCCcccccC
Q 040849 555 IP----SSFSSLRGIENLDLSRNNLSGRI-------PKYFENFLFLQNLNLSFNHFEGEV 603 (809)
Q Consensus 555 ~p----~~~~~l~~L~~LdLs~N~l~~~~-------p~~~~~l~~L~~l~ls~N~l~g~~ 603 (809)
.+ ..+..+++|+.|+|++|++++.. +..+.++++|+.||+++|++.+..
T Consensus 241 ~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~ 300 (362)
T 3goz_A 241 SLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSH 300 (362)
T ss_dssp CHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGG
T ss_pred HHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcc
Confidence 55 33466788889999888855433 345677788888999998887653
No 86
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=1.5e-23 Score=221.97 Aligned_cols=232 Identities=19% Similarity=0.170 Sum_probs=162.4
Q ss_pred CCCCcEEEeccccCCCCCCCchhhhhcccccCCccEEeccccccccccchhh--hhccccCcEEEccCCcccccCC----
Q 040849 314 LHKLQWVSISMNHLGNGEKDDLEFVNSLVNASRLELLGININNFGGMLPEAV--GNLSTRLRILRVGNNQLFGNIP---- 387 (809)
Q Consensus 314 l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~p~~~--~~~~~~L~~L~Ls~n~l~~~~p---- 387 (809)
...++.+.+..+.++.. .+........+++|+.|++++|.+.+..|..+ ..+ ++|++|++++|++.+..+
T Consensus 63 ~~~l~~l~l~~~~~~~~---~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~-~~L~~L~Ls~n~i~~~~~~~~~ 138 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQ---LLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATG-LALSSLRLRNVSWATGRSWLAE 138 (310)
T ss_dssp SCCCCEEEECSCCCBHH---HHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCC-BCCSSCEEESCCCSSTTSSHHH
T ss_pred hcceeEEEEeCCcCCHH---HHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccC-CCCCEEEeecccccchhhhhHH
Confidence 34567788877766421 11112223345779999999999999999887 555 459999999999997655
Q ss_pred ccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecc---c-CcCCcCCCCccEEEcccccCcccCC--c-
Q 040849 388 SGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGE---I-PSSIGNLTLLITLSFDKNMLEGSIP--S- 460 (809)
Q Consensus 388 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~-p~~~~~l~~L~~L~L~~N~l~~~~p--~- 460 (809)
..+..+++|++|+|++|.+++..+..+..+++|++|+|++|++.+. . +..+..+++|++|++++|+++...+ .
T Consensus 139 ~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 218 (310)
T 4glp_A 139 LQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAA 218 (310)
T ss_dssp HHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHH
T ss_pred HHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHH
Confidence 4456899999999999999988889999999999999999998753 2 2334789999999999999973211 1
Q ss_pred cccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCC
Q 040849 461 SLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVR 540 (809)
Q Consensus 461 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 540 (809)
.+..+++|++|||++|++++..|..+..+. .+++|++|+|++|+++ .+|..+. ++
T Consensus 219 l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~----------------------~~~~L~~L~Ls~N~l~-~lp~~~~--~~ 273 (310)
T 4glp_A 219 LAAAGVQPHSLDLSHNSLRATVNPSAPRCM----------------------WSSALNSLNLSFAGLE-QVPKGLP--AK 273 (310)
T ss_dssp HHHHTCCCSSEECTTSCCCCCCCSCCSSCC----------------------CCTTCCCEECCSSCCC-SCCSCCC--SC
T ss_pred HHhcCCCCCEEECCCCCCCccchhhHHhcc----------------------CcCcCCEEECCCCCCC-chhhhhc--CC
Confidence 246778888888888888766565554431 1145555555555555 4444442 45
Q ss_pred CCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcc
Q 040849 541 LEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLS 576 (809)
Q Consensus 541 L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~ 576 (809)
|++|+|++|++++. |. +..+++|+.|+|++|+++
T Consensus 274 L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 274 LRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 66666666666643 22 455566666666666665
No 87
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=4e-23 Score=209.85 Aligned_cols=198 Identities=18% Similarity=0.186 Sum_probs=174.3
Q ss_pred cccCcEEEccCCcccccCCccccCCCCCCeeeCCCcc-ceecCCccccCCCCCCEEEeeC-CeeecccCcCCcCCCCccE
Q 040849 369 STRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQ-FTGRIPGSIGDLHKLQRLGLQG-NKFLGEIPSSIGNLTLLIT 446 (809)
Q Consensus 369 ~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~ 446 (809)
+.++++|++++|++++..+..|.++++|++|++++|+ +++..+..|.++++|++|++++ |++++..+..|.++++|++
T Consensus 30 ~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp CTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 3469999999999998888899999999999999997 8877778999999999999999 9999888889999999999
Q ss_pred EEcccccCcccCCccccCCCCCc---EEeCcCC-cCccccCcchhcccCCce-EEEccCCcCcccCCCCccCCCCCCEEE
Q 040849 447 LSFDKNMLEGSIPSSLGKCQNLI---LLGLSNN-NLTGTIPTEVIGLSSLSI-YLDLSQNQLNGTLPSNFGILKNLGVLD 521 (809)
Q Consensus 447 L~L~~N~l~~~~p~~l~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~l~~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 521 (809)
|++++|++++ +|. +..+++|+ +|++++| ++++..+..+.+++++ + .|++++|+++...+..|.. ++|+.|+
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L-~~~L~l~~n~l~~i~~~~~~~-~~L~~L~ 185 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNE-TLTLKLYNNGFTSVQGYAFNG-TKLDAVY 185 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSS-EEEEECCSCCCCEECTTTTTT-CEEEEEE
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcc-eeEEEcCCCCCcccCHhhcCC-CCCCEEE
Confidence 9999999986 665 88888998 9999999 9987666778899999 7 9999999999555555555 8999999
Q ss_pred ccccc-cccccCccccCC-CCCCEEeCcCCccccccchhhcCCCCCCEEeCCCC
Q 040849 522 VSENK-LSGEIPNSLGSC-VRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRN 573 (809)
Q Consensus 522 Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N 573 (809)
|++|+ +++..+..|.++ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 186 L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 186 LNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred cCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 99995 998878889999 9999999999999965444 6788999999886
No 88
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1.4e-24 Score=233.04 Aligned_cols=212 Identities=16% Similarity=0.196 Sum_probs=119.0
Q ss_pred CCCCcccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCcccccc--ccCCccccCCCcCcc
Q 040849 60 RHFCQWKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYL--FRLQFLWLDNNTFGG 137 (809)
Q Consensus 60 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~ 137 (809)
.-|.+|.++.|++. .++.+++ ++|.+. |..+..+ +++++|++++|.+.+
T Consensus 34 ~vc~~W~~~~~~~~--~~~~l~l------------------------~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~ 84 (336)
T 2ast_B 34 GVCKRWYRLASDES--LWQTLDL------------------------TGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQ 84 (336)
T ss_dssp SSCHHHHHHHTCST--TSSEEEC------------------------TTCBCC---HHHHHHHHHTTCSEEECTTCEECS
T ss_pred HHHHHHHHHhcCch--hheeecc------------------------ccccCC---HHHHHhhhhccceEEEcCCccccc
Confidence 35678999998642 2344444 444443 2334444 555555555555554
Q ss_pred cCCccccCCCcCcEEEcccCCCCCC-CcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccC-cccc-cCccc
Q 040849 138 QIPDNISHCVNLESLRLGFNELVGK-VPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASAN-QFVG-QIPKT 214 (809)
Q Consensus 138 ~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~-~~p~~ 214 (809)
..+. +..+++|++|++++|.+++. +|..+..+++|++|+|++|.+++..+..++.+++|++|++++| .+++ .++..
T Consensus 85 ~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~ 163 (336)
T 2ast_B 85 PLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTL 163 (336)
T ss_dssp CCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHH
T ss_pred cchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHH
Confidence 4433 33455555666655555443 4455555566666666666655555555555666666666666 4543 24444
Q ss_pred ccCCCCccEEEeecC-cCCCC-cchhccCCC-CCceeccCCc--ccc-cccChhhhcCCCCCcEEEccCcc-ccccCCcc
Q 040849 215 LSQLKRMRFIGFGVN-KLSGE-IPFSIYNLS-SLNYFEFPVN--QLQ-GSLPSDLGFTLPNLERLNLGENQ-FTGPIPAS 287 (809)
Q Consensus 215 l~~l~~L~~L~L~~n-~l~~~-~~~~l~~l~-~L~~L~l~~n--~l~-~~~p~~~~~~l~~L~~L~Ls~N~-l~~~~p~~ 287 (809)
+..+++|++|++++| .+++. ++..+..++ +|++|++++| .++ +.+|..+. .+++|+.|++++|. +++..+..
T Consensus 164 ~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~-~~~~L~~L~l~~~~~l~~~~~~~ 242 (336)
T 2ast_B 164 LSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVR-RCPNLVHLDLSDSVMLKNDCFQE 242 (336)
T ss_dssp HHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHH-HCTTCSEEECTTCTTCCGGGGGG
T ss_pred HhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHh-hCCCCCEEeCCCCCcCCHHHHHH
Confidence 555666666666666 55543 344455555 6666666665 333 33444433 46677777777776 55555556
Q ss_pred cccCCCCceEecCCC
Q 040849 288 ISNASHLMRLTIPIN 302 (809)
Q Consensus 288 l~~l~~L~~L~l~~n 302 (809)
+..+++|+.|++++|
T Consensus 243 l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 243 FFQLNYLQHLSLSRC 257 (336)
T ss_dssp GGGCTTCCEEECTTC
T ss_pred HhCCCCCCEeeCCCC
Confidence 666666666666665
No 89
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.1e-22 Score=208.21 Aligned_cols=180 Identities=24% Similarity=0.301 Sum_probs=108.7
Q ss_pred CCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCc
Q 040849 395 NLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLS 474 (809)
Q Consensus 395 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 474 (809)
+.++++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|++++|.+++..|..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4456666666666 3444333 456666666666665555555666666666666666655555555555555555555
Q ss_pred CCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccc
Q 040849 475 NNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGN 554 (809)
Q Consensus 475 ~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 554 (809)
+|+++ +..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++.
T Consensus 92 ~n~l~-------------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 146 (251)
T 3m19_A 92 NNQLA-------------------------SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146 (251)
T ss_dssp TSCCC-------------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCccc-------------------------ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCcc
Confidence 55554 44444455556666666666666655555556666666666666666655
Q ss_pred cchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCccccc
Q 040849 555 IPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGE 602 (809)
Q Consensus 555 ~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~ 602 (809)
.+..|..+++|+.|||++|++++..+..|..+++|++|++++|++++.
T Consensus 147 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 555666666666666666666666666666666666666666666654
No 90
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=5.3e-24 Score=228.39 Aligned_cols=250 Identities=18% Similarity=0.233 Sum_probs=194.6
Q ss_pred ccEEeccccccccccchhhhhc-cccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceec-CCccccCCCCCCEEE
Q 040849 347 LELLGININNFGGMLPEAVGNL-STRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGR-IPGSIGDLHKLQRLG 424 (809)
Q Consensus 347 L~~L~l~~n~~~~~~p~~~~~~-~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ 424 (809)
++.++++.+.+. |..+..+ ...++.|++++|.+.+..+. +..+++|++|++++|.+++. ++..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 555666665554 2333333 24588999999998877665 55789999999999998865 777888899999999
Q ss_pred eeCCeeecccCcCCcCCCCccEEEcccc-cCccc-CCccccCCCCCcEEeCcCC-cCccc-cCcchhccc-CCceEEEcc
Q 040849 425 LQGNKFLGEIPSSIGNLTLLITLSFDKN-MLEGS-IPSSLGKCQNLILLGLSNN-NLTGT-IPTEVIGLS-SLSIYLDLS 499 (809)
Q Consensus 425 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~l~~~L~Ls 499 (809)
+++|++++..|..++.+++|++|++++| .+++. ++..+.++++|++|++++| ++++. ++..+..++ +| ++|+++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L-~~L~l~ 203 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETI-TQLNLS 203 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTC-CEEECC
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCC-CEEEeC
Confidence 9999988888888888999999999999 67753 5666888899999999999 88864 677788888 88 789999
Q ss_pred CC--cCc-ccCCCCccCCCCCCEEEccccc-cccccCccccCCCCCCEEeCcCCc-cccccchhhcCCCCCCEEeCCCCC
Q 040849 500 QN--QLN-GTLPSNFGILKNLGVLDVSENK-LSGEIPNSLGSCVRLEQLGMNGNF-FQGNIPSSFSSLRGIENLDLSRNN 574 (809)
Q Consensus 500 ~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~LdLs~N~ 574 (809)
+| .++ +.+|..+..+++|+.|++++|. +++..+..+..+++|++|++++|. +.......+.++++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 99 455 4566677788999999999998 777888889999999999999995 33332336888999999999998
Q ss_pred cccccccccccC-CCCCeEEccCCcccccCCC
Q 040849 575 LSGRIPKYFENF-LFLQNLNLSFNHFEGEVPI 605 (809)
Q Consensus 575 l~~~~p~~~~~l-~~L~~l~ls~N~l~g~~p~ 605 (809)
++. ..+..+ ..+..|++++|++++..|.
T Consensus 283 i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 283 VPD---GTLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp SCT---TCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred cCH---HHHHHHHhhCcceEEecccCccccCC
Confidence 332 234444 2377778999999988774
No 91
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.2e-22 Score=214.25 Aligned_cols=194 Identities=26% Similarity=0.349 Sum_probs=138.6
Q ss_pred cCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcE
Q 040849 391 RNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLIL 470 (809)
Q Consensus 391 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 470 (809)
..+++|++|++++|.++. +| .+..+++|++|++++|++.+..+ +..+++|++|++++|++++. ..+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 345566666666666653 33 45666666666666666665443 66666666677766666643 25666777777
Q ss_pred EeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCc
Q 040849 471 LGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNF 550 (809)
Q Consensus 471 L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 550 (809)
|++++|++++ ++. +..+++| +.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|+
T Consensus 112 L~l~~n~l~~-~~~-l~~l~~L-~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 112 LDLTSTQITD-VTP-LAGLSNL-QVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EECTTSCCCC-CGG-GTTCTTC-CEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EECCCCCCCC-chh-hcCCCCC-CEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 7777777764 332 6666777 677777777775443 7778888888888888885444 8888888888888888
Q ss_pred cccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccc
Q 040849 551 FQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEG 601 (809)
Q Consensus 551 l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 601 (809)
+++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 886554 7888899999999999887664 7888899999999998875
No 92
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=2.5e-24 Score=233.07 Aligned_cols=269 Identities=19% Similarity=0.175 Sum_probs=158.1
Q ss_pred EECCCCCCccccCccccCCCCccEEeCCCCCCCccCC----ccccccc-cCCccccCCCcCcccCCccccCC-----CcC
Q 040849 80 LLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIP----QEIGYLF-RLQFLWLDNNTFGGQIPDNISHC-----VNL 149 (809)
Q Consensus 80 l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L 149 (809)
.+++.+.++|.+|..+...++|++|||++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566777777777666666667777777777776655 5566666 77777777777776666666554 777
Q ss_pred cEEEcccCCCCCCCccccc----CC-CCCCEEEcccccCcccCCccC----CC-CCCCCEEEcccCcccccCc----ccc
Q 040849 150 ESLRLGFNELVGKVPRKLG----SL-SKLRTLAVHYNNLSGQIPSSF----GN-LSSLEVLSASANQFVGQIP----KTL 215 (809)
Q Consensus 150 ~~L~Ls~N~l~~~~p~~l~----~l-~~L~~L~Ls~N~l~~~~p~~~----~~-l~~L~~L~Ls~N~l~~~~p----~~l 215 (809)
++|+|++|.+++..+..+. .+ ++|++|+|++|++++..+..+ .. .++|++|++++|++++..+ ..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 7777777777666555433 33 677777777777765554443 23 2467777777777764332 333
Q ss_pred cCCC-CccEEEeecCcCCCCcchhccC----C-CCCceeccCCcccccc----cChhhhcCCCCCcEEEccCccccccCC
Q 040849 216 SQLK-RMRFIGFGVNKLSGEIPFSIYN----L-SSLNYFEFPVNQLQGS----LPSDLGFTLPNLERLNLGENQFTGPIP 285 (809)
Q Consensus 216 ~~l~-~L~~L~L~~n~l~~~~~~~l~~----l-~~L~~L~l~~n~l~~~----~p~~~~~~l~~L~~L~Ls~N~l~~~~p 285 (809)
..++ +|++|++++|++++..+..+.. + ++|++|++++|.+++. ++..+....++|++|+|++|.+++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 4444 6666666666666555443332 2 3555555555555431 222222112345555555554443222
Q ss_pred cccccCCCCceEecCCCcceeeCCCCCCCCCCcEEEeccccCCCCCCCchh-hhhcccccCCccEEeccccccccccchh
Q 040849 286 ASISNASHLMRLTIPINGFSGKVPSFGNLHKLQWVSISMNHLGNGEKDDLE-FVNSLVNASRLELLGININNFGGMLPEA 364 (809)
Q Consensus 286 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~~~~l~~~~~L~~L~l~~n~~~~~~p~~ 364 (809)
..+. ..+..+++|+.|++++|.+......... ....+..+++|+.+++++|.+.+..+..
T Consensus 243 ~~l~-------------------~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~ 303 (362)
T 3goz_A 243 ENLK-------------------LLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIP 303 (362)
T ss_dssp HHHH-------------------HTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHH
T ss_pred HHHH-------------------HHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHH
Confidence 1111 0145566777777777776554433222 2234567778888888888887776655
Q ss_pred hhh
Q 040849 365 VGN 367 (809)
Q Consensus 365 ~~~ 367 (809)
+..
T Consensus 304 ~~~ 306 (362)
T 3goz_A 304 ISN 306 (362)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 93
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=4.3e-24 Score=233.70 Aligned_cols=238 Identities=18% Similarity=0.233 Sum_probs=176.4
Q ss_pred ccccCCccEEeccccccccccchh----hhhccccCcEEEccCC---cccccCCccc-------cCCCCCCeeeCCCccc
Q 040849 341 LVNASRLELLGININNFGGMLPEA----VGNLSTRLRILRVGNN---QLFGNIPSGL-------RNLVNLERLLLEGNQF 406 (809)
Q Consensus 341 l~~~~~L~~L~l~~n~~~~~~p~~----~~~~~~~L~~L~Ls~n---~l~~~~p~~l-------~~l~~L~~L~Ls~N~l 406 (809)
+..+++|+.|++++|.+.+..+.. +..+ ++|++|++++| ++.+.+|..+ ..+++|++|+|++|.+
T Consensus 28 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~-~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l 106 (386)
T 2ca6_A 28 LLEDDSVKEIVLSGNTIGTEAARWLSENIASK-KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAF 106 (386)
T ss_dssp HHHCSCCCEEECTTSEECHHHHHHHHHTTTTC-TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCC
T ss_pred HhcCCCccEEECCCCCCCHHHHHHHHHHHHhC-CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcC
Confidence 344455555556555555543333 2233 34667776664 3444445444 6788888888888888
Q ss_pred ee----cCCccccCCCCCCEEEeeCCeeecccCcCCcC----C---------CCccEEEcccccCc-ccCC---ccccCC
Q 040849 407 TG----RIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGN----L---------TLLITLSFDKNMLE-GSIP---SSLGKC 465 (809)
Q Consensus 407 ~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----l---------~~L~~L~L~~N~l~-~~~p---~~l~~l 465 (809)
++ .+|..+..+++|++|+|++|.+++..+..+.. + ++|++|++++|+++ +.+| ..+..+
T Consensus 107 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 186 (386)
T 2ca6_A 107 GPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH 186 (386)
T ss_dssp CTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhC
Confidence 76 46667788888888888888886544433333 3 78889999999887 3344 466778
Q ss_pred CCCcEEeCcCCcCcc-----ccCcchhcccCCceEEEccCCcCc----ccCCCCccCCCCCCEEEccccccccc----cC
Q 040849 466 QNLILLGLSNNNLTG-----TIPTEVIGLSSLSIYLDLSQNQLN----GTLPSNFGILKNLGVLDVSENKLSGE----IP 532 (809)
Q Consensus 466 ~~L~~L~Ls~N~l~~-----~~p~~~~~l~~l~~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p 532 (809)
++|+.|++++|+++. ..|..+..+++| +.|+|++|+++ +.+|..+..+++|+.|+|++|++++. +|
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L-~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 265 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQEL-KVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 265 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTC-CEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCc-cEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHH
Confidence 899999999998872 344477788888 78999999986 56777888999999999999999876 56
Q ss_pred cccc--CCCCCCEEeCcCCcccc----ccchhh-cCCCCCCEEeCCCCCcccccc
Q 040849 533 NSLG--SCVRLEQLGMNGNFFQG----NIPSSF-SSLRGIENLDLSRNNLSGRIP 580 (809)
Q Consensus 533 ~~~~--~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~LdLs~N~l~~~~p 580 (809)
..+. .+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|++++..|
T Consensus 266 ~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 266 DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 6663 49999999999999998 588887 678999999999999998775
No 94
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=7.1e-23 Score=231.67 Aligned_cols=209 Identities=22% Similarity=0.344 Sum_probs=166.1
Q ss_pred ccCCCCCCCCCC-----ccccc-ccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccC
Q 040849 52 VLSSWNYSRHFC-----QWKGV-TCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRL 125 (809)
Q Consensus 52 ~l~~W~~~~~~c-----~w~gv-~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L 125 (809)
.+.+|..+.++| .|.|+ .|.. .+++.|+++++.+++ +|+.+. ++|++|+|++|.|+ .+| ..+++|
T Consensus 32 ~l~~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 32 AWDKWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCC
Confidence 356787666788 79999 7863 579999999999988 787664 88999999999998 567 457899
Q ss_pred CccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccC
Q 040849 126 QFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASAN 205 (809)
Q Consensus 126 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 205 (809)
++|+|++|.|++ +|. +.+ +|++|+|++|.+++ +|. .+++|++|+|++|++++ +|. .+++|++|++++|
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N 170 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNN 170 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSS
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCC
Confidence 999999999997 777 665 99999999999987 565 68999999999999986 665 5789999999999
Q ss_pred cccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCC-------ceeccCCcccccccChhhhcCCCCCcEEEccCc
Q 040849 206 QFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSL-------NYFEFPVNQLQGSLPSDLGFTLPNLERLNLGEN 278 (809)
Q Consensus 206 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L-------~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N 278 (809)
++++ +|. |. ++|+.|++++|+|+ .+|. +.. +| +.|++++|.++ .+|..++ .+++|+.|+|++|
T Consensus 171 ~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~-~l~~L~~L~L~~N 240 (571)
T 3cvr_A 171 QLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENIL-SLDPTCTIILEDN 240 (571)
T ss_dssp CCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGG-GSCTTEEEECCSS
T ss_pred CCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHh-cCCCCCEEEeeCC
Confidence 9987 666 65 88999999999988 4555 544 56 77777777777 5777666 4777777777777
Q ss_pred cccccCCcccccC
Q 040849 279 QFTGPIPASISNA 291 (809)
Q Consensus 279 ~l~~~~p~~l~~l 291 (809)
++++.+|..+..+
T Consensus 241 ~l~~~~p~~l~~l 253 (571)
T 3cvr_A 241 PLSSRIRESLSQQ 253 (571)
T ss_dssp SCCHHHHHHHHHH
T ss_pred cCCCcCHHHHHHh
Confidence 7777777666554
No 95
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=5.1e-22 Score=197.01 Aligned_cols=181 Identities=22% Similarity=0.261 Sum_probs=143.5
Q ss_pred CCcccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCc
Q 040849 62 FCQWKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPD 141 (809)
Q Consensus 62 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 141 (809)
.|.|.+|.|+... ++ .+|..+ .++|++|+|++|++++..+..|+++++|++|++++|++++..+.
T Consensus 6 ~C~~~~v~c~~~~------------l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 6 SCSGTTVECYSQG------------RT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp EEETTEEECCSSC------------CS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EECCCEEEecCCC------------cc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 4899999997531 11 233333 45889999999999977777788999999999999999877777
Q ss_pred cccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCc
Q 040849 142 NISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRM 221 (809)
Q Consensus 142 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 221 (809)
.|.++++|++|+|++|.+++..+..|..+++|++|++++|++++..+..|..+++|++|++++|++++..+..+..+++|
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 150 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSL 150 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred hcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCc
Confidence 78889999999999999987777778889999999999999987777778888999999999998887777678888888
Q ss_pred cEEEeecCcCCCCcchhccCCCCCceeccCCcccccccChhhh
Q 040849 222 RFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQLQGSLPSDLG 264 (809)
Q Consensus 222 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~ 264 (809)
+.|++++|.+.+ .+++|++|+++.|+++|.+|.+++
T Consensus 151 ~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 151 QYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp CEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTS
T ss_pred cEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCc
Confidence 888888887664 344666777777777777766554
No 96
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=1e-21 Score=207.15 Aligned_cols=191 Identities=27% Similarity=0.384 Sum_probs=165.1
Q ss_pred cCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcc
Q 040849 371 RLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFD 450 (809)
Q Consensus 371 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 450 (809)
+|+.|++++|.+.. +| .+..+++|++|++++|.+++..+ +..+++|++|++++|++.+. ..+..+++|++|+++
T Consensus 42 ~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLT 115 (308)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECT
T ss_pred CcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECC
Confidence 48999999998875 34 68889999999999999986554 89999999999999998864 368889999999999
Q ss_pred cccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccc
Q 040849 451 KNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGE 530 (809)
Q Consensus 451 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 530 (809)
+|++++. + .+..+++|++|++++|++++..+ +..+++| +.|++++|++++..+ +..+++|+.|++++|++++.
T Consensus 116 ~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L-~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 116 STQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNL-QYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp TSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTC-CEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCc-cEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcC
Confidence 9999864 3 38899999999999999986443 7788888 799999999997544 88999999999999999865
Q ss_pred cCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccc
Q 040849 531 IPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGR 578 (809)
Q Consensus 531 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~ 578 (809)
.+ +..+++|++|+|++|++++..| +..+++|+.|++++|++++.
T Consensus 189 ~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 189 SP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp GG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred hh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 54 8899999999999999997764 89999999999999999863
No 97
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.7e-21 Score=209.64 Aligned_cols=244 Identities=14% Similarity=0.095 Sum_probs=187.2
Q ss_pred CcccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCC-c
Q 040849 63 CQWKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIP-D 141 (809)
Q Consensus 63 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~ 141 (809)
|.|..|.|+.. +++ .+|..+ .+++++|+|++|+|+...+.+|+++++|++|+|++|.+.+.+| .
T Consensus 9 C~~~~v~C~~~------------~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQES------------KVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEEST------------TCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEecCC------------CCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 67777888632 233 355555 3689999999999997767789999999999999999877665 4
Q ss_pred cccCCCcCcE-EEcccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEccc-CcccccCcccccCCC
Q 040849 142 NISHCVNLES-LRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASA-NQFVGQIPKTLSQLK 219 (809)
Q Consensus 142 ~~~~l~~L~~-L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~ 219 (809)
.|.++++|++ +.++.|+++...|..|..+++|++|++++|++++..+..+....++..|++.+ +++....+..|..+.
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 6889988775 66778999988889999999999999999999977777777888889999966 567766667777765
Q ss_pred -CccEEEeecCcCCCCcchhccCCCCCceeccCCcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEe
Q 040849 220 -RMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLT 298 (809)
Q Consensus 220 -~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 298 (809)
.++.|++++|+++. +|.......+|+.+++..++..+.+|...+..+++|++|++++|+++...+..+. +|+.|.
T Consensus 154 ~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~---~L~~L~ 229 (350)
T 4ay9_X 154 FESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE---NLKKLR 229 (350)
T ss_dssp SSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT---TCCEEE
T ss_pred hhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc---cchHhh
Confidence 68899999999985 4445556678999998765444488887766889999999999999855444444 455555
Q ss_pred cCCCcceeeCCCCCCCCCCcEEEeccc
Q 040849 299 IPINGFSGKVPSFGNLHKLQWVSISMN 325 (809)
Q Consensus 299 l~~n~l~~~~~~~~~l~~L~~L~Ls~n 325 (809)
+.++.--..+|.+..+++|+.++++++
T Consensus 230 ~l~~~~l~~lP~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 230 ARSTYNLKKLPTLEKLVALMEASLTYP 256 (350)
T ss_dssp CTTCTTCCCCCCTTTCCSCCEEECSCH
T ss_pred hccCCCcCcCCCchhCcChhhCcCCCC
Confidence 544443446667777778887777644
No 98
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=7e-21 Score=204.89 Aligned_cols=224 Identities=18% Similarity=0.162 Sum_probs=134.1
Q ss_pred ccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCC-ccccCCCCCCE-EEeeCCeeecccCcCCcCCCCccEE
Q 040849 370 TRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIP-GSIGDLHKLQR-LGLQGNKFLGEIPSSIGNLTLLITL 447 (809)
Q Consensus 370 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L 447 (809)
+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|+. +.++.|++++..|..|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 347777777777776555567777777777777777655444 45666666554 4555677776666677777777777
Q ss_pred EcccccCcccCCccccCCCCCcEEeCcC-CcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccc-c
Q 040849 448 SFDKNMLEGSIPSSLGKCQNLILLGLSN-NNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSE-N 525 (809)
Q Consensus 448 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N 525 (809)
++++|++.+..+..+....++..|++.+ |++....+..+.++...++.|+|++|+|+...+..| ...+|+.|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCC
Confidence 7777777666555566666666676654 455533344455554433567777777764433333 345666777664 4
Q ss_pred ccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCc
Q 040849 526 KLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNH 598 (809)
Q Consensus 526 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~ 598 (809)
.++...+..|.++++|++|+|++|+|+...+..| .+|+.|.+.+++--..+| .+.++++|+.++++++.
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHH
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCC-CchhCcChhhCcCCCCc
Confidence 4543333456667777777777777764444333 344444444433333444 35666667777766543
No 99
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=4.5e-21 Score=216.97 Aligned_cols=189 Identities=27% Similarity=0.314 Sum_probs=140.1
Q ss_pred cCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcc
Q 040849 371 RLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFD 450 (809)
Q Consensus 371 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 450 (809)
+++.|++++|++++ +|..+ .++|++|+|++|+++ .+| ..+++|++|++++|++++ +|. +.+ +|++|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 47778888888776 55544 367888888888887 455 446788888888888876 555 554 78888888
Q ss_pred cccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccc
Q 040849 451 KNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGE 530 (809)
Q Consensus 451 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 530 (809)
+|++++ +|. .+++|+.|+|++|+|++ +|. .+++| +.|+|++|++++ +|. |. ++|+.|+|++|+|+ .
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L-~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~ 194 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSL-EVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-S 194 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTC-CEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-S
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCc-CEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-c
Confidence 888876 554 56788888888888875 665 45666 678888888886 555 55 78888888888888 5
Q ss_pred cCccccCCCCC-------CEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCC
Q 040849 531 IPNSLGSCVRL-------EQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLF 588 (809)
Q Consensus 531 ~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~ 588 (809)
+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..|..+..
T Consensus 195 lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 195 LPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 666 554 66 88888888888 56777777888888888888888888887776543
No 100
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=6.9e-21 Score=188.80 Aligned_cols=181 Identities=20% Similarity=0.219 Sum_probs=157.8
Q ss_pred cEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccc
Q 040849 102 RVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYN 181 (809)
Q Consensus 102 ~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 181 (809)
+.++++++.++ .+|..+ .++|++|++++|.+++..+..|.++++|++|++++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 46788888887 455544 468999999999999877778899999999999999999877777899999999999999
Q ss_pred cCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCceeccCCcccccccCh
Q 040849 182 NLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQLQGSLPS 261 (809)
Q Consensus 182 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~ 261 (809)
++++..+..|.++++|++|++++|++++..+..|..+++|++|++++|++++..+..+..+++|++|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 9997777778999999999999999998887788999999999999999998877778899999999999998774
Q ss_pred hhhcCCCCCcEEEccCccccccCCcccccCCC
Q 040849 262 DLGFTLPNLERLNLGENQFTGPIPASISNASH 293 (809)
Q Consensus 262 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 293 (809)
.+++|+.|+++.|+++|.+|.+++.++.
T Consensus 163 ----~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ----TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 4667889999999999999988876654
No 101
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=1.1e-20 Score=189.96 Aligned_cols=166 Identities=23% Similarity=0.270 Sum_probs=139.1
Q ss_pred CCCCCCCCCCcccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCC
Q 040849 54 SSWNYSRHFCQWKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNN 133 (809)
Q Consensus 54 ~~W~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N 133 (809)
.-|..+.+.|+|.+|.|+.. ++ +.+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 10 ~~~~~~~~~Cs~~~v~c~~~--~l-----------~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N 74 (229)
T 3e6j_A 10 SAACPSQCSCSGTTVDCRSK--RH-----------ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSN 74 (229)
T ss_dssp -CCCCTTCEEETTEEECTTS--CC-----------SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred hccCCCCCEEeCCEeEccCC--Cc-----------CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCC
Confidence 34556778999999999743 11 13444443 78999999999999988999999999999999999
Q ss_pred cCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccCcc
Q 040849 134 TFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPK 213 (809)
Q Consensus 134 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 213 (809)
+++...+..|.++++|++|+|++|++++..+..|..+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+.
T Consensus 75 ~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 75 QLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT
T ss_pred CCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHH
Confidence 998776677899999999999999999877777889999999999999998 7788888999999999999999877777
Q ss_pred cccCCCCccEEEeecCcCCCCc
Q 040849 214 TLSQLKRMRFIGFGVNKLSGEI 235 (809)
Q Consensus 214 ~l~~l~~L~~L~L~~n~l~~~~ 235 (809)
.|..+++|+.|++++|.+....
T Consensus 154 ~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTTTCTTCCEEECTTSCBCTTB
T ss_pred HHhCCCCCCEEEeeCCCccCCc
Confidence 7888888999988888877554
No 102
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=1e-20 Score=188.90 Aligned_cols=156 Identities=22% Similarity=0.234 Sum_probs=119.6
Q ss_pred EEEcccccCcccCCccccCCCCCcEEeCcCCcCccccC-cchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccc
Q 040849 446 TLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIP-TEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSE 524 (809)
Q Consensus 446 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 524 (809)
.+++++|.++. +|..+. +.+++|+|++|++++..| ..+..+++| +.|+|++|++++..+..|..+++|++|+|++
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L-~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQL-RKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTC-CEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCC-CEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 55555555542 344332 245666666666665433 335666666 6777777777777777788888888888888
Q ss_pred cccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCC
Q 040849 525 NKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVP 604 (809)
Q Consensus 525 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 604 (809)
|++++..|..|.++++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|++|++++|++++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88888777788888889999999999988888888888999999999999998888888889999999999999888766
Q ss_pred C
Q 040849 605 I 605 (809)
Q Consensus 605 ~ 605 (809)
.
T Consensus 171 l 171 (220)
T 2v70_A 171 L 171 (220)
T ss_dssp G
T ss_pred h
Confidence 4
No 103
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=2.8e-20 Score=185.83 Aligned_cols=155 Identities=23% Similarity=0.267 Sum_probs=102.4
Q ss_pred EEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEcccc
Q 040849 446 TLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSEN 525 (809)
Q Consensus 446 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 525 (809)
.+++++|.++ .+|..+. ++|+.|++++|++++..+..+..+++| +.|+|++|++++..|..|..+++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L-~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKL-RRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTC-CEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCC-CEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 3444444444 2333322 355555555555554444455555555 45666666666666666777777777777777
Q ss_pred ccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCC
Q 040849 526 KLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVP 604 (809)
Q Consensus 526 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 604 (809)
+|+...+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|++|++++|++.+..+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 7775555566777777777777777777777777777778888888888877777777777888888888887776443
No 104
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.82 E-value=1.8e-21 Score=228.60 Aligned_cols=230 Identities=19% Similarity=0.139 Sum_probs=129.9
Q ss_pred CCHHHHHHHHHHHHhcCCCCccccCCCCCC-CCCCcccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCC
Q 040849 30 SNETDQLALLEFKAKVTHDPLEVLSSWNYS-RHFCQWKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKN 108 (809)
Q Consensus 30 ~~~~~~~~ll~~k~~~~~~~~~~l~~W~~~-~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~ 108 (809)
....++++|+++..+.....+..-..|... ...+.|.++.++. .+++.++|..+.+... +..+ |+.++|+.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-~~~~-----l~~l~Ls~ 200 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEA-NQAL-----LQHKKLSQ 200 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcc-hhhH-----hhcCccCc
Confidence 346788999999988753333334456433 3568899998874 6899999998888763 3333 33444444
Q ss_pred CCCCc---------cCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcc
Q 040849 109 NSFRN---------EIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVH 179 (809)
Q Consensus 109 n~l~~---------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 179 (809)
|.|.+ ..|..|..++.|+.|+|++|.+. .+|..+.++++|++|+|++|.++ .+|..|+.+++|++|+|+
T Consensus 201 ~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls 278 (727)
T 4b8c_D 201 YSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLS 278 (727)
T ss_dssp ---------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECT
T ss_pred ccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCc
Confidence 44432 45777888999999999999988 77777778999999999999988 788888999999999999
Q ss_pred cccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCC-CceeccCCcccccc
Q 040849 180 YNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSS-LNYFEFPVNQLQGS 258 (809)
Q Consensus 180 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~-L~~L~l~~n~l~~~ 258 (809)
+|+|+ .+|..|+++++|++|+|++|.++ .+|..|+.+++|+.|+|++|.+++.+|..+..+.. +..+++++|.++|.
T Consensus 279 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~ 356 (727)
T 4b8c_D 279 HNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIP 356 (727)
T ss_dssp TSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred CCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCc
Confidence 99998 77888999999999999999887 66777899999999999999999888887766533 23467888888876
Q ss_pred cChhhhcCCCCCcEEEccCc
Q 040849 259 LPSDLGFTLPNLERLNLGEN 278 (809)
Q Consensus 259 ~p~~~~~~l~~L~~L~Ls~N 278 (809)
+|. .|+.|+++.|
T Consensus 357 ~p~-------~l~~l~l~~n 369 (727)
T 4b8c_D 357 LPH-------ERRFIEINTD 369 (727)
T ss_dssp CCC-------C---------
T ss_pred Ccc-------ccceeEeecc
Confidence 664 3456666666
No 105
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=8.5e-20 Score=197.22 Aligned_cols=178 Identities=23% Similarity=0.158 Sum_probs=109.1
Q ss_pred CeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCc-CCCCccEEEcccccCcccCCccccCCCCCcEEeCcC
Q 040849 397 ERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIG-NLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSN 475 (809)
Q Consensus 397 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 475 (809)
+.+++++|.++ .+|..+. +.++.|+|++|++++..+..|. ++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46677777776 3444332 3466666666666666555555 566666666666666655555566666565555555
Q ss_pred CcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCcccccc
Q 040849 476 NNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNI 555 (809)
Q Consensus 476 N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 555 (809)
|+|+ +..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..
T Consensus 98 N~l~-------------------------~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 152 (361)
T 2xot_A 98 NHLH-------------------------TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP 152 (361)
T ss_dssp SCCC-------------------------EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC
T ss_pred CcCC-------------------------cCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC
Confidence 5555 344445555666666666666666666666666666666666666666544
Q ss_pred chhh---cCCCCCCEEeCCCCCcccccccccccCCC--CCeEEccCCccccc
Q 040849 556 PSSF---SSLRGIENLDLSRNNLSGRIPKYFENFLF--LQNLNLSFNHFEGE 602 (809)
Q Consensus 556 p~~~---~~l~~L~~LdLs~N~l~~~~p~~~~~l~~--L~~l~ls~N~l~g~ 602 (809)
+..| ..+++|+.|||++|+|++..+..|..++. |+.|++++|++.+.
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 4444 45667777777777777666566666665 36677777777653
No 106
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=3.3e-19 Score=177.98 Aligned_cols=135 Identities=20% Similarity=0.215 Sum_probs=85.8
Q ss_pred cEEEcccccCcccCC-ccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEcc
Q 040849 445 ITLSFDKNMLEGSIP-SSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVS 523 (809)
Q Consensus 445 ~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 523 (809)
++|++++|++++..| ..|..+++|++|+|++|++++..+..+.++++| ++|+|++|++++..+..|..+++|++|+|+
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGV-NEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTC-CEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCC-CEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 344444444443322 234444455555555555544444445555555 455555555555555566677777777777
Q ss_pred ccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccc
Q 040849 524 ENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIP 580 (809)
Q Consensus 524 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p 580 (809)
+|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|++++..+
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 777777777777778888888888888887778888888888888888888876554
No 107
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=2.2e-19 Score=193.99 Aligned_cols=180 Identities=22% Similarity=0.117 Sum_probs=132.1
Q ss_pred CcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCcccc-CCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcc
Q 040849 372 LRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIG-DLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFD 450 (809)
Q Consensus 372 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 450 (809)
-+.++++++++.. +|..+. ..++.|+|++|++++..+..+. ++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 20 ~~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 4789999999985 565553 4689999999999998888888 99999999999999999888999999999999999
Q ss_pred cccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccc
Q 040849 451 KNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGE 530 (809)
Q Consensus 451 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 530 (809)
+|++++..+..|..+++|++|+|++|++++..|..+.++++| +.|+|++|++++..+..|..
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L-~~L~L~~N~l~~l~~~~~~~----------------- 158 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQL-QKLYLSQNQISRFPVELIKD----------------- 158 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC-CEEECCSSCCCSCCGGGTC------------------
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccC-CEEECCCCcCCeeCHHHhcC-----------------
Confidence 999998888889999999999998888875555555555555 44555555554322222200
Q ss_pred cCccccCCCCCCEEeCcCCccccccchhhcCCCC--CCEEeCCCCCcc
Q 040849 531 IPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRG--IENLDLSRNNLS 576 (809)
Q Consensus 531 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~LdLs~N~l~ 576 (809)
+..+++|+.|+|++|+|++..+..|..++. ++.|+|++|.+.
T Consensus 159 ----~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 159 ----GNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp -------CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ----cccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 034555666666666666555555555554 356666666665
No 108
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=6.4e-19 Score=177.16 Aligned_cols=155 Identities=26% Similarity=0.279 Sum_probs=105.8
Q ss_pred cEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccc
Q 040849 445 ITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSE 524 (809)
Q Consensus 445 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 524 (809)
+.++.+++.++ .+|..+. ++|++|+|++|++++..|..+.++++| +.|+|++|+++...+..|..+++|++|+|++
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L-~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINL-KELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCC-cEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 34555555554 3333332 456666666666665555556666666 5666666666555555667777777777777
Q ss_pred cccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCC
Q 040849 525 NKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVP 604 (809)
Q Consensus 525 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 604 (809)
|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|++++..+..|..+++|+.|++++|++.+..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 7777666666777777888888888777 667777778888888888888887777777778888888888888776554
No 109
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=5.3e-19 Score=176.47 Aligned_cols=153 Identities=23% Similarity=0.277 Sum_probs=96.2
Q ss_pred CeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCC
Q 040849 397 ERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNN 476 (809)
Q Consensus 397 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 476 (809)
+.+++++|.++ .+|..+. ++|+.|++++|++++..+..|..+++|++|+|++|++++..|..
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~--------------- 75 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDA--------------- 75 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTT---------------
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHH---------------
Confidence 35566666655 3343332 45555555555555444444555555555555555554444444
Q ss_pred cCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccc
Q 040849 477 NLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIP 556 (809)
Q Consensus 477 ~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 556 (809)
+.++++| ++|+|++|+++...+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+
T Consensus 76 ---------~~~l~~L-~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 145 (220)
T 2v9t_B 76 ---------FQGLRSL-NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 145 (220)
T ss_dssp ---------TTTCSSC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred ---------hhCCcCC-CEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECH
Confidence 4444444 455555555554445556677777777777777777777777778888888888888887777
Q ss_pred hhhcCCCCCCEEeCCCCCccc
Q 040849 557 SSFSSLRGIENLDLSRNNLSG 577 (809)
Q Consensus 557 ~~~~~l~~L~~LdLs~N~l~~ 577 (809)
..|..+++|+.|+|++|++..
T Consensus 146 ~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 146 GTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTTTTCTTCCEEECCSSCEEC
T ss_pred HHHhCCCCCCEEEeCCCCcCC
Confidence 778888888888888888764
No 110
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.7e-19 Score=188.48 Aligned_cols=187 Identities=22% Similarity=0.298 Sum_probs=118.8
Q ss_pred EEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEccccc
Q 040849 374 ILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNM 453 (809)
Q Consensus 374 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 453 (809)
.+.+..+.+.+.. .+..+++|++|++++|.++.. + .+..+++|++|++++|++++..+ +..+++|++|++++|.
T Consensus 28 ~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~ 101 (291)
T 1h6t_A 28 KDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENK 101 (291)
T ss_dssp HHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred HHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCc
Confidence 3445555554332 234566777777777777633 2 36666777777777776665443 5666666666666666
Q ss_pred CcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCc
Q 040849 454 LEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPN 533 (809)
Q Consensus 454 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 533 (809)
+++. ..+..+++|++|++++|+++ +. +.+..+++|+.|++++|++++. .
T Consensus 102 l~~~--~~l~~l~~L~~L~L~~n~i~-------------------------~~--~~l~~l~~L~~L~l~~n~l~~~--~ 150 (291)
T 1h6t_A 102 VKDL--SSLKDLKKLKSLSLEHNGIS-------------------------DI--NGLVHLPQLESLYLGNNKITDI--T 150 (291)
T ss_dssp CCCG--GGGTTCTTCCEEECTTSCCC-------------------------CC--GGGGGCTTCCEEECCSSCCCCC--G
T ss_pred CCCC--hhhccCCCCCEEECCCCcCC-------------------------CC--hhhcCCCCCCEEEccCCcCCcc--h
Confidence 6542 23555555555555555554 22 2345566677777777777654 4
Q ss_pred cccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccc
Q 040849 534 SLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEG 601 (809)
Q Consensus 534 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 601 (809)
.+..+++|+.|++++|++++..| +..+++|+.|++++|++++. | .+..+++|+.|++++|+++.
T Consensus 151 ~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 151 VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred hhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 56777777777777777776554 77777777777777777753 3 37777888888888887764
No 111
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.7e-19 Score=206.56 Aligned_cols=172 Identities=24% Similarity=0.379 Sum_probs=79.0
Q ss_pred cCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcE
Q 040849 391 RNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLIL 470 (809)
Q Consensus 391 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 470 (809)
..+++|+.|++++|.+.. ++ .+..+++|+.|+|++|++.+..| +..+++|+.|+|++|.+++. ..+..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCE
Confidence 344444444444444442 12 24444444444444444443332 44444444444444444431 13444445555
Q ss_pred EeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCc
Q 040849 471 LGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNF 550 (809)
Q Consensus 471 L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 550 (809)
|+|++|++++ + ..+..+++| +.|+|++|++++. ..+..+++|+.|+|++|++++..| +..+++|+.|+|++|+
T Consensus 114 L~Ls~N~l~~-l-~~l~~l~~L-~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 114 LSLEHNGISD-I-NGLVHLPQL-ESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EECTTSCCCC-C-GGGGGCTTC-SEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEecCCCCCC-C-ccccCCCcc-CEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 5555555442 1 234444444 3444444444433 334444555555555555544433 4445555555555555
Q ss_pred cccccchhhcCCCCCCEEeCCCCCccc
Q 040849 551 FQGNIPSSFSSLRGIENLDLSRNNLSG 577 (809)
Q Consensus 551 l~~~~p~~~~~l~~L~~LdLs~N~l~~ 577 (809)
|++. ..+..+++|+.|+|++|++++
T Consensus 187 i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 187 ISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CCCC--hHHccCCCCCEEEccCCcCcC
Confidence 5432 234445555555555555444
No 112
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=1.3e-19 Score=189.38 Aligned_cols=169 Identities=25% Similarity=0.375 Sum_probs=126.1
Q ss_pred ccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEc
Q 040849 370 TRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSF 449 (809)
Q Consensus 370 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 449 (809)
++|+.|++++|.+... + .+..+++|++|++++|++++..+ +..+++|++|++++|++++. | .+..+++|++|++
T Consensus 46 ~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL-S-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG-G-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC-h-hhccCCCCCEEEC
Confidence 3599999999999865 3 48999999999999999997655 99999999999999999863 3 4899999999999
Q ss_pred ccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEcccccccc
Q 040849 450 DKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSG 529 (809)
Q Consensus 450 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 529 (809)
++|++++. ..+..+++|+.|++++|++++. ..+.. +++|+.|++++|++++
T Consensus 120 ~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~-------------------------l~~L~~L~L~~N~l~~ 170 (291)
T 1h6t_A 120 EHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSR-------------------------LTKLDTLSLEDNQISD 170 (291)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGG-------------------------CTTCSEEECCSSCCCC
T ss_pred CCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhcc-------------------------CCCCCEEEccCCcccc
Confidence 99999864 5688889999999999888742 33434 4455555555555554
Q ss_pred ccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCccc
Q 040849 530 EIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSG 577 (809)
Q Consensus 530 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~ 577 (809)
..| +..+++|+.|++++|.+++. | .+..+++|+.|++++|+++.
T Consensus 171 ~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 171 IVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred chh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 333 55556666666666666543 2 25666666666666666654
No 113
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=1.4e-21 Score=222.40 Aligned_cols=224 Identities=17% Similarity=0.160 Sum_probs=136.9
Q ss_pred CcccccccCCCCCcEEEEECCCCCCcc-------------------------ccC---ccccCCCCccEEeCCCCCCCcc
Q 040849 63 CQWKGVTCSPRHQRVTALLLPSLLLQG-------------------------SLS---PHIGNLSFLRVLDLKNNSFRNE 114 (809)
Q Consensus 63 c~w~gv~c~~~~~~v~~l~l~~~~l~g-------------------------~~~---~~l~~l~~L~~LdLs~n~l~~~ 114 (809)
-.|.++.|+....+|-.++++.-.+.- ... ..+..+++|+.|+|++|.++ .
T Consensus 285 ~~W~~~~~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~L~~L~Ls~n~L~-~ 363 (567)
T 1dce_A 285 VEWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVEKST-V 363 (567)
T ss_dssp CCCBCTTSSCCSEEEEEEECCGGGTSTTSSEEEEEEEETTTTEEEEEEEETTCSEEEEECCSTTTTSSSCCCCHHHHH-H
T ss_pred eeeccCCcccccceeEEeecCccccccccccceEEEeeccCCCCccccccCCCchhhhcccccCccceeccCChhhHH-h
Confidence 368888887766677777765432210 111 12467889999999999997 7
Q ss_pred CCccccccccCCccccCCCc-------------CcccCCccccCCCcCcEEE-cccCCCCCCCcccccCCCCCCEEEccc
Q 040849 115 IPQEIGYLFRLQFLWLDNNT-------------FGGQIPDNISHCVNLESLR-LGFNELVGKVPRKLGSLSKLRTLAVHY 180 (809)
Q Consensus 115 ~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 180 (809)
+|.+++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+. +|+.+.+++
T Consensus 364 Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-----------~L~~l~l~~ 432 (567)
T 1dce_A 364 LQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-----------DLRSKFLLE 432 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-----------HHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-----------hhhhhhhhc
Confidence 89999999999999998775 5566677777788888877 5555432 233333444
Q ss_pred ccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCceeccCCcccccccC
Q 040849 181 NNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQLQGSLP 260 (809)
Q Consensus 181 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p 260 (809)
|.++...+ ..|++|++++|++++ +|. ++.+++|+.|++++|.++ .+|..+.++++|+.|++++|.+++ +|
T Consensus 433 n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp 502 (567)
T 1dce_A 433 NSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD 502 (567)
T ss_dssp HHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG
T ss_pred ccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc
Confidence 44432211 125555555555554 333 555555555555555555 445555555555555555555553 44
Q ss_pred hhhhcCCCCCcEEEccCccccccC-CcccccCCCCceEecCCCcceeeCCC
Q 040849 261 SDLGFTLPNLERLNLGENQFTGPI-PASISNASHLMRLTIPINGFSGKVPS 310 (809)
Q Consensus 261 ~~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~l~~n~l~~~~~~ 310 (809)
.+. .+++|+.|+|++|++++.. |..+..+++|+.|++++|.+++.+|.
T Consensus 503 -~l~-~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 503 -GVA-NLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp -GGT-TCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred -ccC-CCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 333 5666666666666666554 66666666666666666666655443
No 114
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=6.1e-19 Score=201.88 Aligned_cols=190 Identities=22% Similarity=0.263 Sum_probs=118.7
Q ss_pred CccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcc
Q 040849 100 FLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVH 179 (809)
Q Consensus 100 ~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 179 (809)
.+..++++.+.+....+ +..+++|+.|++++|.+.. +| .+..+++|+.|+|++|.+.+..| +..+++|++|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 34555666666654433 4566777777777777663 23 46667777777777777765443 6677777777777
Q ss_pred cccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCceeccCCccccccc
Q 040849 180 YNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQLQGSL 259 (809)
Q Consensus 180 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~ 259 (809)
+|++++ +| .+..+++|++|+|++|++++. +.+..+++|+.|+|++|.+++. ..+..+++|+.|++++|.+++..
T Consensus 96 ~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~ 169 (605)
T 1m9s_A 96 ENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 169 (605)
T ss_dssp SSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCG
T ss_pred CCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCch
Confidence 777764 22 566777777777777777653 3466677777777777776654 45566666666666666666444
Q ss_pred ChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCCccee
Q 040849 260 PSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPINGFSG 306 (809)
Q Consensus 260 p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~ 306 (809)
| +. .+++|+.|+|++|++++. ..+..+++|+.|++++|.+.+
T Consensus 170 ~--l~-~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 170 P--LA-GLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp G--GT-TCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred h--hc-cCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 4 22 566666666666666643 245566666666666666554
No 115
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=1.3e-21 Score=222.68 Aligned_cols=105 Identities=26% Similarity=0.257 Sum_probs=50.9
Q ss_pred EEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCC
Q 040849 495 YLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNN 574 (809)
Q Consensus 495 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~ 574 (809)
.|+|++|++++ +|. ++.+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .|+++++|+.|+|++|+
T Consensus 445 ~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~ 519 (567)
T 1dce_A 445 VLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNR 519 (567)
T ss_dssp EEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSC
T ss_pred EEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCC
Confidence 44444444443 232 444445555555555554 444445555555555555555543 33 44455555555555555
Q ss_pred ccccc-ccccccCCCCCeEEccCCcccccCC
Q 040849 575 LSGRI-PKYFENFLFLQNLNLSFNHFEGEVP 604 (809)
Q Consensus 575 l~~~~-p~~~~~l~~L~~l~ls~N~l~g~~p 604 (809)
|++.+ |..|..+++|+.|++++|++++.+|
T Consensus 520 l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 520 LQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 55444 4445555555555555555544443
No 116
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=4.2e-19 Score=173.21 Aligned_cols=133 Identities=26% Similarity=0.366 Sum_probs=84.0
Q ss_pred cEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCC-CccCCCCCCEEEccccccccccCccccCCCCCCEEeCc
Q 040849 469 ILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPS-NFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMN 547 (809)
Q Consensus 469 ~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 547 (809)
+.+++++|+++ .+|..+.. .+ +.|++++|++++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l-~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HT-TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TC-SEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC--CC-CEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 34555555553 34443322 33 4566666666554443 36666667777777777766666666667777777777
Q ss_pred CCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCCC
Q 040849 548 GNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVPI 605 (809)
Q Consensus 548 ~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 605 (809)
+|+|++..|..|.++++|++|||++|++++.+|..|..+++|++|++++|+++|..+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 7777766666666777777777777777776677777777777777777777665553
No 117
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.77 E-value=5.1e-19 Score=184.00 Aligned_cols=102 Identities=29% Similarity=0.541 Sum_probs=84.6
Q ss_pred cccccccceeccCCceeEEEEEECC---CCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|.+.+.||+|+||+||+|++.. ...++.|||| ++++|||||+++|+|..
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----- 86 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE----- 86 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee-----
Confidence 3568889999999999999999753 2234589999 68999999999999876
Q ss_pred CceEEEEEeccCCCChhhhhcCCC---------CCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKP---------EAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~---------~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|||||||++|+|.++|+.++ .....++|.++++|+.|||+||+|||
T Consensus 87 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH 145 (299)
T 4asz_A 87 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA 145 (299)
T ss_dssp SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999997542 23456999999999999999999998
No 118
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.76 E-value=1.3e-18 Score=183.58 Aligned_cols=101 Identities=30% Similarity=0.527 Sum_probs=85.9
Q ss_pred ccccccceeccCCceeEEEEEECC---CCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
++|...++||+|+||+||+|+++. ...++.|||| ++++|||||+++|+|.. +
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-----~ 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-----G 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----S
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----C
Confidence 467788999999999999999763 2245689999 68999999999999876 6
Q ss_pred ceEEEEEeccCCCChhhhhcCCCC-----------CCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPE-----------APRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~-----------~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..|||||||++|+|.++++.++. ...+++|.++++|+.|||+||+|||
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH 175 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA 175 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 789999999999999999986532 2346999999999999999999998
No 119
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=3.5e-18 Score=167.52 Aligned_cols=155 Identities=15% Similarity=0.191 Sum_probs=99.4
Q ss_pred cCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCce
Q 040849 415 GDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSI 494 (809)
Q Consensus 415 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~ 494 (809)
..+++|++|++++|.+. .+| .+..+++|++|++++|.++ .+..+..+++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~------------------------- 91 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLE------------------------- 91 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCC-------------------------
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCC-------------------------
Confidence 44566777777777666 333 4555556666666655443 222444444444
Q ss_pred EEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCC
Q 040849 495 YLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNN 574 (809)
Q Consensus 495 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~ 574 (809)
+|++++|++++..|..+..+++|++|++++|++++..|..+..+++|++|++++|.+.+.+| .+..+++|+.|++++|+
T Consensus 92 ~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 92 RLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBC
T ss_pred EEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCC
Confidence 45555555555555566677777777777777777777777778888888888887333455 57778888888888888
Q ss_pred cccccccccccCCCCCeEEccCCcccc
Q 040849 575 LSGRIPKYFENFLFLQNLNLSFNHFEG 601 (809)
Q Consensus 575 l~~~~p~~~~~l~~L~~l~ls~N~l~g 601 (809)
+++. + .+..+++|++|++++|++.+
T Consensus 171 i~~~-~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 171 VHDY-R-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCCC-T-TGGGCSSCCEEEECBC----
T ss_pred CcCh-H-HhccCCCCCEEEeeCcccCC
Confidence 8763 3 67778888888888887753
No 120
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.75 E-value=1.3e-18 Score=181.76 Aligned_cols=101 Identities=21% Similarity=0.428 Sum_probs=84.1
Q ss_pred ccccccceeccCCceeEEEEEECC---CCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
+++++.++||+|+||+||+|++.. +..++.|||| ++++|||||+++|+|..
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~----- 100 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK----- 100 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE-----
Confidence 356678899999999999999753 2244689999 47899999999999876
Q ss_pred CceEEEEEeccCCCChhhhhcCCCC------------CCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPE------------APRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..+||||||++|+|.++|+.+.. ....++|.++.+|+.|||+||+|||
T Consensus 101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH 162 (308)
T 4gt4_A 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS 162 (308)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 6779999999999999999975421 1245899999999999999999998
No 121
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=2.5e-19 Score=210.50 Aligned_cols=194 Identities=23% Similarity=0.229 Sum_probs=118.9
Q ss_pred eCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCc
Q 040849 400 LLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLT 479 (809)
Q Consensus 400 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 479 (809)
+++.|.+. ..+..+..+++|+.|+|++|++. .+|..+.++++|++|+|++|.|+ .+|..|.++++|++|+|++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 34445554 55777888888888888888887 56666778888888888888888 77888888888999999999888
Q ss_pred cccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCC-CCEEeCcCCccccccchh
Q 040849 480 GTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVR-LEQLGMNGNFFQGNIPSS 558 (809)
Q Consensus 480 ~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~ 558 (809)
.+|..+.++++| ++|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|..
T Consensus 284 -~lp~~~~~l~~L-~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 284 -SLPAELGSCFQL-KYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp -SCCSSGGGGTTC-SEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred -ccChhhcCCCCC-CEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 778888888888 78899999887 66777888999999999999998888888765432 234788899998888864
Q ss_pred hcCCCCCCEEeCCCC--------CcccccccccccCCCCCeEEccCCcccccCCC
Q 040849 559 FSSLRGIENLDLSRN--------NLSGRIPKYFENFLFLQNLNLSFNHFEGEVPI 605 (809)
Q Consensus 559 ~~~l~~L~~LdLs~N--------~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 605 (809)
|+.|++++| .+.+.++..+.++..+....+++|-+.+....
T Consensus 361 ------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~~~~ 409 (727)
T 4b8c_D 361 ------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQHYAT 409 (727)
T ss_dssp -----------------------------------------------CCCGGGCC
T ss_pred ------cceeEeecccccccccCCccccccchhhcccccceeeeeccccccccCc
Confidence 556677776 45555566667777788888888888754443
No 122
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=1.1e-17 Score=164.07 Aligned_cols=153 Identities=16% Similarity=0.258 Sum_probs=89.2
Q ss_pred cccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCE
Q 040849 120 GYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEV 199 (809)
Q Consensus 120 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 199 (809)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.+. .+..+..+++|++|++++|++++..+..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 55666666666666666 444 4666666666666666553 2235666667777777777666656666666677777
Q ss_pred EEcccCcccccCcccccCCCCccEEEeecCc-CCCCcchhccCCCCCceeccCCcccccccChhhhcCCCCCcEEEccCc
Q 040849 200 LSASANQFVGQIPKTLSQLKRMRFIGFGVNK-LSGEIPFSIYNLSSLNYFEFPVNQLQGSLPSDLGFTLPNLERLNLGEN 278 (809)
Q Consensus 200 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~Ls~N 278 (809)
|++++|++++..|..+..+++|++|++++|. ++ .+| .+..+++|++|++++|.+++ ++ .+. .+++|+.|++++|
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~-~l~~L~~L~l~~N 191 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIE-DFPKLNQLYAFSQ 191 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGG-GCSSCCEEEECBC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-Hhc-cCCCCCEEEeeCc
Confidence 7777776666666666666666666666665 33 233 34555555555555555542 22 222 3455555555555
Q ss_pred ccc
Q 040849 279 QFT 281 (809)
Q Consensus 279 ~l~ 281 (809)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 543
No 123
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=2.1e-18 Score=177.24 Aligned_cols=171 Identities=20% Similarity=0.215 Sum_probs=114.3
Q ss_pred CCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEE
Q 040849 392 NLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILL 471 (809)
Q Consensus 392 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 471 (809)
++.++..+++++|.+++.. .+..+++|++|++++|+++. +| .+..+++|++|++++|++++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4556677777887777443 46677777777777777763 33 46666666666666666665433 6666666666
Q ss_pred eCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCcc
Q 040849 472 GLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFF 551 (809)
Q Consensus 472 ~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 551 (809)
++++|++++ +|. +.. ++|+.|+|++|++++. ..+..+++|+.|++++|++
T Consensus 91 ~L~~N~l~~-l~~--------------------------~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i 140 (263)
T 1xeu_A 91 SVNRNRLKN-LNG--------------------------IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKL 140 (263)
T ss_dssp ECCSSCCSC-CTT--------------------------CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCC
T ss_pred ECCCCccCC-cCc--------------------------ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcC
Confidence 666666653 221 111 6677777777777653 2477777777777777777
Q ss_pred ccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCccccc
Q 040849 552 QGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGE 602 (809)
Q Consensus 552 ~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~ 602 (809)
++. | .+..+++|+.|++++|++++. ..+..+++|+.|++++|++++.
T Consensus 141 ~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 141 KSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 754 3 577778888888888888766 5677788888888888887754
No 124
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.73 E-value=2.4e-18 Score=178.87 Aligned_cols=97 Identities=35% Similarity=0.483 Sum_probs=83.8
Q ss_pred HHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccc
Q 040849 699 LFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVD 756 (809)
Q Consensus 699 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~ 756 (809)
|+...+++.+.++||+|+||+||+|++.+ .|||| ++++|||||+++|+|.
T Consensus 31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~-----~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~--- 102 (307)
T 3omv_A 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-----DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT--- 102 (307)
T ss_dssp CBCCTTSCCEEEECCCCSSSEEEEEESSS-----EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC---
T ss_pred cEEcHHHeEEeeEEeeCCCcEEEEEEECC-----cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE---
Confidence 34455678889999999999999998642 48888 6899999999999975
Q ss_pred cCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 757 FQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 757 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++.+|||||||++|+|.++|+..+ ..++|.++.+|+.|||+||+|||
T Consensus 103 ---~~~~~iVmEy~~gGsL~~~l~~~~---~~l~~~~~~~i~~qia~gL~yLH 149 (307)
T 3omv_A 103 ---KDNLAIVTQWCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLH 149 (307)
T ss_dssp ---SSSCEEEEECCSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCeEEEEEEcCCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 345899999999999999998543 45999999999999999999998
No 125
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=4.5e-18 Score=174.70 Aligned_cols=171 Identities=22% Similarity=0.282 Sum_probs=116.9
Q ss_pred CCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEE
Q 040849 97 NLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTL 176 (809)
Q Consensus 97 ~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 176 (809)
.+.+++.+++++|.+++.. .+..+++|++|++++|.++. +| .+..+++|++|+|++|++++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4556677777777777443 57777888888888887773 44 57777888888888888775544 7778888888
Q ss_pred EcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCceeccCCcccc
Q 040849 177 AVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFPVNQLQ 256 (809)
Q Consensus 177 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 256 (809)
+|++|++++ +|.. .. ++|++|++++|++++. +.+..+++|+.|++++|++++. + .+..+++|+.|++++|+++
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 888888775 3332 22 7788888888877763 3477777777777777777754 2 4666666666666666666
Q ss_pred cccChhhhcCCCCCcEEEccCcccccc
Q 040849 257 GSLPSDLGFTLPNLERLNLGENQFTGP 283 (809)
Q Consensus 257 ~~~p~~~~~~l~~L~~L~Ls~N~l~~~ 283 (809)
+. ..+. .+++|+.|++++|.+++.
T Consensus 164 ~~--~~l~-~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLT-RLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTST-TCCCCCEEEEEEEEEECC
T ss_pred ch--HHhc-cCCCCCEEeCCCCcccCC
Confidence 43 2232 566666777766666543
No 126
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=1.1e-17 Score=178.21 Aligned_cols=102 Identities=11% Similarity=-0.047 Sum_probs=84.6
Q ss_pred ccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCC-EEEeeCCeeecccCcCCcCCCCccEEE
Q 040849 370 TRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQ-RLGLQGNKFLGEIPSSIGNLTLLITLS 448 (809)
Q Consensus 370 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 448 (809)
++|+.+++++|+++...+..|.++.+|+.|+|.+| ++...+.+|.++++|+ .+++.+ +++...+..|.+|++|+.++
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 45888888888888777778888888999988887 7767778888888888 888888 67767778888888888888
Q ss_pred cccccCcccCCccccCCCCCcEEeC
Q 040849 449 FDKNMLEGSIPSSLGKCQNLILLGL 473 (809)
Q Consensus 449 L~~N~l~~~~p~~l~~l~~L~~L~L 473 (809)
++.|.++.+.+.+|.++++|+.++.
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred eCCCccCccchhhhcCCcchhhhcc
Confidence 8888888887888888888888763
No 127
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=4.1e-17 Score=159.05 Aligned_cols=132 Identities=24% Similarity=0.307 Sum_probs=98.4
Q ss_pred cEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCc-chhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEcc
Q 040849 445 ITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPT-EVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVS 523 (809)
Q Consensus 445 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 523 (809)
+++++++|.++ .+|..+.. +|++|++++|++++..+. .+..++.| ++|+|++|++++..|..|..+++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHL-VKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTC-CEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCC-CEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 45556666554 34443332 666777777777654443 36666777 677777777777777788888888888888
Q ss_pred ccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccc
Q 040849 524 ENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIP 580 (809)
Q Consensus 524 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p 580 (809)
+|+|++..|..|.++++|++|+|++|++++.+|..|..+++|+.|+|++|++++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 888888888888888888888888888888888888888888888888888887665
No 128
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.71 E-value=1.1e-17 Score=176.36 Aligned_cols=98 Identities=22% Similarity=0.257 Sum_probs=80.4
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|+..+.||+|+||+||+|+....+ +.|||| ++++|||||++++++.. +
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~--~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-----~ 95 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDG--RQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-----N 95 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTC--CEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----T
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCC--CEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-----C
Confidence 368999999999999999999976544 489999 57899999999999765 7
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+.+|||||||+||+|.++|+.++ ...+++.+++.|+.||+.||+|||
T Consensus 96 ~~~yiVmEy~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH 142 (350)
T 4b9d_A 96 GSLYIVMDYCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVH 142 (350)
T ss_dssp TEEEEEEECCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999997542 345789999999999999999998
No 129
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.70 E-value=1.1e-17 Score=175.49 Aligned_cols=96 Identities=20% Similarity=0.260 Sum_probs=85.3
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe---------------cCCCCcceeeEeeeeeccccCCCceEEEEE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------RSIRHRNLVKIITSCASVDFQGNDFKALVY 767 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------~~l~H~niv~l~~~~~~~~~~~~~~~~lv~ 767 (809)
.+.|...++||+|+||+||+|+....+ +.|||| +.++|||||++++++.. ++.+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g--~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~-----~~~~~ivm 129 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTG--FQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVRE-----GPWVNIFM 129 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTC--CEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEE-----TTEEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCC--CEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEE-----CCEEEEEE
Confidence 356888899999999999999976544 499999 57899999999999765 78899999
Q ss_pred eccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 768 EFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 768 Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
|||+||+|.++|+++ ..+++.++..|+.||++||+|||
T Consensus 130 Ey~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH 167 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQM----GCLPEDRALYYLGQALEGLEYLH 167 (336)
T ss_dssp CCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred eccCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999754 35999999999999999999998
No 130
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.70 E-value=1.1e-17 Score=173.27 Aligned_cols=95 Identities=21% Similarity=0.322 Sum_probs=85.5
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
++|+..+.||+|+||+||+|+....+ +.|||| +.++|||||++++++.+ +
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~--~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-----~ 104 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATS--REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-----D 104 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTC--CEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----S
T ss_pred cccEEEEEEecccCeEEEEEEECCCC--CEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----C
Confidence 57999999999999999999976544 499999 57899999999999654 7
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+.+|||||||+||+|.+++++. ..+++.++..|+.||+.||+|||
T Consensus 105 ~~~yivmEy~~gG~L~~~i~~~----~~l~e~~~~~~~~qi~~al~ylH 149 (311)
T 4aw0_A 105 EKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEYLH 149 (311)
T ss_dssp SEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999754 45999999999999999999998
No 131
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.70 E-value=1.6e-17 Score=173.98 Aligned_cols=96 Identities=29% Similarity=0.402 Sum_probs=81.7
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccCCCceEE
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQGNDFKA 764 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~~~~~~~ 764 (809)
.+|.+.++||+|+||+||+|++.+ + .|||| ..++|||||+++|+|.... .....+|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~g--~--~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~ 77 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWRG--E--EVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLW 77 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETT--E--EEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEECC--E--EEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEE
Confidence 357788999999999999999742 3 89999 4679999999999987621 1124689
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 765 LVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 765 lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
||||||++|+|.++++.+ .++|+++.+|+.|+|+||+|||
T Consensus 78 lV~Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH 117 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLH 117 (303)
T ss_dssp EEEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999743 4899999999999999999998
No 132
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.69 E-value=1.7e-17 Score=174.64 Aligned_cols=94 Identities=31% Similarity=0.355 Sum_probs=84.3
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCCceE
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~~~~ 763 (809)
+.|+..+.||+|+||+||+|+....+. .|||| +.++|||||++++++.. ++.+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~--~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-----~~~~ 146 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGK--LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GDEL 146 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCC--EEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-----TTEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCC--EEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----CCEE
Confidence 468899999999999999999765444 99999 56899999999999776 7889
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 764 ALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 764 ~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
|||||||++|+|.+++++. .+++.++..|+.||+.||+|||
T Consensus 147 ~ivmEy~~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH 187 (346)
T 4fih_A 147 WVVMEFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLH 187 (346)
T ss_dssp EEEECCCTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999742 4899999999999999999998
No 133
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=1.1e-16 Score=170.65 Aligned_cols=263 Identities=11% Similarity=0.088 Sum_probs=175.4
Q ss_pred CCCCcEEEeccccCCCCCCCchhhhhcccc-cCCccEEeccccccc--cccchhhhhccccCcEEEccCCcccccCCccc
Q 040849 314 LHKLQWVSISMNHLGNGEKDDLEFVNSLVN-ASRLELLGININNFG--GMLPEAVGNLSTRLRILRVGNNQLFGNIPSGL 390 (809)
Q Consensus 314 l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~-~~~L~~L~l~~n~~~--~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l 390 (809)
+.+++.|.++++- . ..++ ..+.. +++|+.|+++.|.+. ...+..+ +. +..+.+..|.+ .+..|
T Consensus 24 ~~~l~~L~l~g~i-~---~~~~---~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~-~~~~~~~~~~I---~~~aF 89 (329)
T 3sb4_A 24 ANSITHLTLTGKL-N---AEDF---RHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PN-GKFYIYMANFV---PAYAF 89 (329)
T ss_dssp HHHCSEEEEEEEE-C---HHHH---HHHHHSCTTCCEEEEEEEEECCEEESSSSS---GG-GCCEEECTTEE---CTTTT
T ss_pred hCceeEEEEeccc-c---HHHH---HHHHHhhccCeEEecCcceeEEecCccccc---cc-ccccccccccc---CHHHh
Confidence 5578888887642 1 1122 23333 678888888888876 2221111 11 34455555533 34456
Q ss_pred cC--------CCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccC----cccC
Q 040849 391 RN--------LVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNML----EGSI 458 (809)
Q Consensus 391 ~~--------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l----~~~~ 458 (809)
.+ +++|+.|+|.+ .++...+.+|.+|++|+.|++++|.+....+..|.++.++..+.+..+.. ....
T Consensus 90 ~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~ 168 (329)
T 3sb4_A 90 SNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWE 168 (329)
T ss_dssp EEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTT
T ss_pred cccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccc
Confidence 66 89999999988 88877778899999999999999988878888888888888777766322 2233
Q ss_pred CccccCCCCCc-EEeCcCCcC------------------------ccccCcch-hcccCCceEEEccCCcCcccCCCCcc
Q 040849 459 PSSLGKCQNLI-LLGLSNNNL------------------------TGTIPTEV-IGLSSLSIYLDLSQNQLNGTLPSNFG 512 (809)
Q Consensus 459 p~~l~~l~~L~-~L~Ls~N~l------------------------~~~~p~~~-~~l~~l~~~L~Ls~N~l~~~~p~~~~ 512 (809)
..+|.++..|+ .+++....- .......+ ..+++| +.++|++|+++.+.+..|.
T Consensus 169 ~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L-~~l~L~~n~i~~I~~~aF~ 247 (329)
T 3sb4_A 169 HFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNL-VSLDISKTNATTIPDFTFA 247 (329)
T ss_dssp TSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTC-CEEECTTBCCCEECTTTTT
T ss_pred ccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCC-eEEECCCCCcceecHhhhh
Confidence 44565666665 343332110 00000011 125566 6788888888877777788
Q ss_pred CCCCCCEEEccccccccccCccccCCCCCC-EEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCe
Q 040849 513 ILKNLGVLDVSENKLSGEIPNSLGSCVRLE-QLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQN 591 (809)
Q Consensus 513 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~ 591 (809)
++++|+.|+|++| ++...+.+|.+|++|+ .+++.+ .++...+.+|.++++|+.+++++|+++...+.+|.++++|+.
T Consensus 248 ~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ 325 (329)
T 3sb4_A 248 QKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKL 325 (329)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCE
T ss_pred CCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhh
Confidence 8888888888877 7766677788888888 888877 677667778888888888888888888777778888888887
Q ss_pred EEc
Q 040849 592 LNL 594 (809)
Q Consensus 592 l~l 594 (809)
++.
T Consensus 326 ly~ 328 (329)
T 3sb4_A 326 IYK 328 (329)
T ss_dssp EEC
T ss_pred hcc
Confidence 753
No 134
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.69 E-value=2.4e-17 Score=170.88 Aligned_cols=97 Identities=27% Similarity=0.316 Sum_probs=85.5
Q ss_pred ccccccceeccCCceeEEEEEECC-CCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNH-DDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
++|+..+.||+|+||+||+|+... +.+++.|||| ++++|||||++++++.. +
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-----~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT-----E 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE-----T
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----C
Confidence 579999999999999999998643 2345689999 56899999999999765 7
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..|||||||+||+|.+++++. ..+++.++..|+.||+.||+|||
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH 143 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLH 143 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEcCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999754 45999999999999999999998
No 135
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=3.4e-17 Score=159.57 Aligned_cols=131 Identities=23% Similarity=0.316 Sum_probs=96.8
Q ss_pred cEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcC
Q 040849 469 ILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNG 548 (809)
Q Consensus 469 ~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 548 (809)
+++++++|+++ .+|..+. +.+ +.|++++|+++ .+|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l-~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDV-TELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTC-CEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCC-CEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 34555565555 4444332 234 56677777766 4556777778888888888888877777788888888888888
Q ss_pred CccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCC
Q 040849 549 NFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVP 604 (809)
Q Consensus 549 N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 604 (809)
|+|++..|..|.++++|+.|+|++|++++..+..|..+++|+.|++++|++.+...
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 88888777788888888888888888887777778888888888888888876544
No 136
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.68 E-value=3e-17 Score=169.31 Aligned_cols=96 Identities=29% Similarity=0.446 Sum_probs=81.8
Q ss_pred cccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCCceEE
Q 040849 707 SLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGNDFKA 764 (809)
Q Consensus 707 ~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~~~~~ 764 (809)
...++||+|+||+||+|.....+. .|||| ++++|||||++++++... ..+++.+|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~--~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-~~~~~~~~ 105 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTV--EVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCIV 105 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCC--EEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE-ETTEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCe--EEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeec-cCCCcEEE
Confidence 556789999999999999765544 89999 578999999999997642 12245689
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 765 LVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 765 lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
||||||++|+|.+++++. ..+++.++..|+.|||+||+|||
T Consensus 106 lvmEy~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~ylH 146 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLH 146 (290)
T ss_dssp EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999753 45899999999999999999998
No 137
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=9.1e-17 Score=153.08 Aligned_cols=133 Identities=19% Similarity=0.158 Sum_probs=97.4
Q ss_pred CCCccEEeCCCCCCC-ccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEE
Q 040849 98 LSFLRVLDLKNNSFR-NEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTL 176 (809)
Q Consensus 98 l~~L~~LdLs~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 176 (809)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 467888888888887 66777778888888888888887755 667778888888888888877677777777788888
Q ss_pred EcccccCcccC-CccCCCCCCCCEEEcccCcccccCc---ccccCCCCccEEEeecCcCC
Q 040849 177 AVHYNNLSGQI-PSSFGNLSSLEVLSASANQFVGQIP---KTLSQLKRMRFIGFGVNKLS 232 (809)
Q Consensus 177 ~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~L~~n~l~ 232 (809)
+|++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|+++.|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 88888777532 2567777777777777777775544 35666667777766666654
No 138
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.68 E-value=3.9e-17 Score=176.35 Aligned_cols=95 Identities=31% Similarity=0.351 Sum_probs=85.1
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
.+.|+..+.||+|+||+||+|+....+. .|||| +.++|||||++++++.. ++.
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~--~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-----~~~ 222 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGK--LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GDE 222 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCC--EEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCC--EEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-----CCE
Confidence 4569999999999999999999765444 99999 57899999999999776 788
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+|||||||+||+|.++++.. .+++.++..|+.||++||+|||
T Consensus 223 ~~iVmEy~~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH 264 (423)
T 4fie_A 223 LWVVMEFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLH 264 (423)
T ss_dssp EEEEEECCTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999743 4899999999999999999998
No 139
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.68 E-value=2.2e-17 Score=175.58 Aligned_cols=111 Identities=23% Similarity=0.310 Sum_probs=90.9
Q ss_pred cHHHHHHhcccccccceeccCCceeEEEEEECCC---CceeEEEEe---------------------cCC-CCcceeeEe
Q 040849 695 SYQNLFKATDGFSLENLIGAGSFGSVYKGILNHD---DHETLVAVK---------------------RSI-RHRNLVKII 749 (809)
Q Consensus 695 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~---~~~~~vavK---------------------~~l-~H~niv~l~ 749 (809)
...+|+...++|++.+.||+|+||+||+|++... ...+.|||| +++ +|||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 3456777888999999999999999999997542 234689999 244 459999999
Q ss_pred eeeeccccCCCceEEEEEeccCCCChhhhhcCCCC------------CCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 750 TSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPE------------APRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 750 ~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
|+|.. +++.+|||||||++|+|.++|+.++. ....++|.++..|+.|||+||+|||
T Consensus 135 g~~~~----~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH 202 (353)
T 4ase_A 135 GACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 202 (353)
T ss_dssp EEECC----TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEe----cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh
Confidence 99864 24568999999999999999975421 1345899999999999999999998
No 140
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=2.2e-16 Score=150.46 Aligned_cols=133 Identities=22% Similarity=0.206 Sum_probs=108.3
Q ss_pred CCCcEEeCcCCcCc-cccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEE
Q 040849 466 QNLILLGLSNNNLT-GTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQL 544 (809)
Q Consensus 466 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 544 (809)
++|+.|++++|+++ +.+|..+..++.| +.|++++|++++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L-~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNL-EFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGC-CEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCC-CEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 56777777777776 5667766777777 6777777777765 677888899999999999988788888889999999
Q ss_pred eCcCCcccccc-chhhcCCCCCCEEeCCCCCcccccc---cccccCCCCCeEEccCCcccc
Q 040849 545 GMNGNFFQGNI-PSSFSSLRGIENLDLSRNNLSGRIP---KYFENFLFLQNLNLSFNHFEG 601 (809)
Q Consensus 545 ~Ls~N~l~~~~-p~~~~~l~~L~~LdLs~N~l~~~~p---~~~~~l~~L~~l~ls~N~l~g 601 (809)
++++|.+++.. +..+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+..
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 99999998753 3788899999999999999987766 578889999999999998763
No 141
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=4e-16 Score=150.00 Aligned_cols=132 Identities=24% Similarity=0.312 Sum_probs=99.9
Q ss_pred cEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcC
Q 040849 469 ILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNG 548 (809)
Q Consensus 469 ~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 548 (809)
+.+++++|+++ .+|..+. +++ +.|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSA-TRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTC-SEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCCc-cCCCCCC--CCC-cEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 45566666655 3443322 344 5677777777766666677888888888888888877667778888888888888
Q ss_pred CccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccccCC
Q 040849 549 NFFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEGEVP 604 (809)
Q Consensus 549 N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 604 (809)
|++++..+..|..+++|+.|++++|++++..+..|..+++|++|++++|+++|.+|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88887777778888888888888888887777777888888888888888887665
No 142
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=1.7e-16 Score=147.93 Aligned_cols=128 Identities=21% Similarity=0.269 Sum_probs=89.7
Q ss_pred CCCcEEeCcCCcCc-cccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEE
Q 040849 466 QNLILLGLSNNNLT-GTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQL 544 (809)
Q Consensus 466 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 544 (809)
++|+.|++++|+++ +.+|..+..++++ +.|++++|++++. ..+..+++|++|++++|++++.+|..+..+++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEEL-EFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTC-CEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCC-cEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 34455555555554 4444444455555 4555555555544 456677888888888888887777777778888888
Q ss_pred eCcCCccccc-cchhhcCCCCCCEEeCCCCCcccccc---cccccCCCCCeEEccC
Q 040849 545 GMNGNFFQGN-IPSSFSSLRGIENLDLSRNNLSGRIP---KYFENFLFLQNLNLSF 596 (809)
Q Consensus 545 ~Ls~N~l~~~-~p~~~~~l~~L~~LdLs~N~l~~~~p---~~~~~l~~L~~l~ls~ 596 (809)
++++|.+++. .|..+..+++|+.|++++|++++..+ ..+..+++|+.||+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8888888864 45778888888888888888887766 5788888888888763
No 143
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=8e-17 Score=150.08 Aligned_cols=126 Identities=17% Similarity=0.154 Sum_probs=76.5
Q ss_pred CCccEEeCCCCCCC-ccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEE
Q 040849 99 SFLRVLDLKNNSFR-NEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLA 177 (809)
Q Consensus 99 ~~L~~LdLs~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 177 (809)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+.++++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666666 55666666666666666666666644 4566666666666666666655565555666666666
Q ss_pred cccccCccc-CCccCCCCCCCCEEEcccCcccccCc---ccccCCCCccEEEe
Q 040849 178 VHYNNLSGQ-IPSSFGNLSSLEVLSASANQFVGQIP---KTLSQLKRMRFIGF 226 (809)
Q Consensus 178 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~L 226 (809)
+++|++++. .+..++.+++|++|++++|.+++..+ ..+..+++|+.|++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 666666642 23556666666666666666655443 34555555555544
No 144
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.64 E-value=2e-16 Score=164.77 Aligned_cols=103 Identities=19% Similarity=0.368 Sum_probs=81.8
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeecccc-----
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDF----- 757 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~----- 757 (809)
++|+..+.||+|+||+||+|+....+. .|||| ++++|||||++++++.....
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~--~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDC--NYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCC--EEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCC--EEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 468999999999999999999765444 89999 67899999999999765211
Q ss_pred --CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 --QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 --~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++..+|||||||++|+|.++++.+.. ....++..++.|+.||++||+|||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH 135 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLH 135 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHH
Confidence 123357999999999999999986532 233567788999999999999998
No 145
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.1e-15 Score=148.96 Aligned_cols=109 Identities=29% Similarity=0.387 Sum_probs=63.8
Q ss_pred CCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEc
Q 040849 99 SFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAV 178 (809)
Q Consensus 99 ~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 178 (809)
+.|++|+|++|.|+ .+|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|..+++|++|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 35666666666665 45556666666666666666666555555666666666666666665555555555556666666
Q ss_pred ccccCcccCCccCCCCCCCCEEEcccCccc
Q 040849 179 HYNNLSGQIPSSFGNLSSLEVLSASANQFV 208 (809)
Q Consensus 179 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 208 (809)
++|++++..+..|..+++|++|++++|.+.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 665555444444555555555555555544
No 146
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.64 E-value=1.7e-16 Score=162.07 Aligned_cols=94 Identities=23% Similarity=0.392 Sum_probs=79.7
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
++|+..+.||+|+||+||+|+.... ++.|||| +.++|||||++++++.. +
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~--~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-----~ 85 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTT--GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-----K 85 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTT--CCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----S
T ss_pred eCeEEEEEEecCcCeEEEEEEECCC--CCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----C
Confidence 6799999999999999999996544 4499999 46899999999999665 7
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..||||||| +|+|.+++.++ ..+++.++..|+.||+.||+|||
T Consensus 86 ~~~~ivmEy~-~g~L~~~l~~~----~~l~e~~~~~~~~qi~~al~ylH 129 (275)
T 3hyh_A 86 DEIIMVIEYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCH 129 (275)
T ss_dssp SEEEEEEECC-CEEHHHHHHHS----CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCC-CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999999 68999999754 45999999999999999999998
No 147
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=2e-15 Score=145.13 Aligned_cols=133 Identities=23% Similarity=0.237 Sum_probs=84.6
Q ss_pred CcccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCcc
Q 040849 63 CQWKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDN 142 (809)
Q Consensus 63 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 142 (809)
|+|.+|.|+.. .++ .+|..+ .++|++|++++|++++..+..|+.+++|++|+|++|.+++..+..
T Consensus 7 C~~~~l~~~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 7 CSGTEIRCNSK------------GLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp EETTEEECCSS------------CCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred eCCCEEEecCC------------CCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 77888888642 222 233322 257777777777777666666677777777777777777555555
Q ss_pred ccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcccCCccCCCCCCCCEEEcccCccccc
Q 040849 143 ISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQ 210 (809)
Q Consensus 143 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 210 (809)
|.++++|++|+|++|.+++..+..+..+++|++|++++|++++..+..|..+++|++|++++|.+.+.
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 66666777777777766655555566666666666666666654444456666666666666665543
No 148
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.58 E-value=1.7e-15 Score=171.22 Aligned_cols=96 Identities=21% Similarity=0.286 Sum_probs=85.5
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------------cCCCCcceeeEeeeeeccc
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------------RSIRHRNLVKIITSCASVD 756 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------------~~l~H~niv~l~~~~~~~~ 756 (809)
.++|+..++||+|+||+||+|+....+ +.|||| +.++|||||++++++.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg--~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~-- 263 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTG--KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-- 263 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTC--CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC--
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCC--CEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE--
Confidence 467999999999999999999976544 499999 35689999999999654
Q ss_pred cCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 757 FQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 757 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++.+|||||||+||+|.++|++. ..+++.++..|+.||+.||+|||
T Consensus 264 ---~~~lylVmEy~~GGdL~~~l~~~----~~l~E~~a~~y~~qIl~aL~yLH 309 (689)
T 3v5w_A 264 ---PDKLSFILDLMNGGDLHYHLSQH----GVFSEADMRFYAAEIILGLEHMH 309 (689)
T ss_dssp ---SSEEEEEECCCCSCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999754 45999999999999999999999
No 149
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=4.9e-15 Score=142.11 Aligned_cols=133 Identities=16% Similarity=0.171 Sum_probs=99.7
Q ss_pred ccCCCCCcEEeCcCCcCccccCcchhccc-CCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCC
Q 040849 462 LGKCQNLILLGLSNNNLTGTIPTEVIGLS-SLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVR 540 (809)
Q Consensus 462 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 540 (809)
+.++++|+.|++++|+++ .+|. +..+. ++ ++|++++|++++. ..+..+++|++|+|++|++++..|..+..+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L-~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQF-DAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCC-SEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCC-CEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 445566666666666666 3343 33333 55 6777777777765 56778888999999999998665566688999
Q ss_pred CCEEeCcCCccccccch--hhcCCCCCCEEeCCCCCccccccc----ccccCCCCCeEEccCCcccc
Q 040849 541 LEQLGMNGNFFQGNIPS--SFSSLRGIENLDLSRNNLSGRIPK----YFENFLFLQNLNLSFNHFEG 601 (809)
Q Consensus 541 L~~L~Ls~N~l~~~~p~--~~~~l~~L~~LdLs~N~l~~~~p~----~~~~l~~L~~l~ls~N~l~g 601 (809)
|++|++++|.++ .+|. .+..+++|+.|++++|+++. +|. .+..+++|+.||+++|....
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 999999999986 4555 78889999999999999984 455 48889999999999988764
No 150
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.57 E-value=2.9e-15 Score=162.20 Aligned_cols=99 Identities=20% Similarity=0.340 Sum_probs=84.9
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeecc-ccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASV-DFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~-~~~~~ 760 (809)
++|+..+.||+|+||+||+|+....+ +.|||| +.++|||||++++++... .+.+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~--~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTG--QQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTC--CEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCC--CEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 57999999999999999999976544 499999 468999999999987642 24456
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+.+|||||||+ |+|.+++..+ ..+++.++..|++||+.||+|||
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~----~~l~~~~~~~~~~qil~al~ylH 175 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSS----QPLTLEHVRYFLYQLLRGLKYMH 175 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSS----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 78999999996 7899999754 46999999999999999999998
No 151
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=3.7e-17 Score=160.37 Aligned_cols=132 Identities=22% Similarity=0.261 Sum_probs=79.6
Q ss_pred cccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCC
Q 040849 461 SLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVR 540 (809)
Q Consensus 461 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 540 (809)
.+..+++|++|++++|++++ +| .+..+++| ++|++++|+++ .+|..+..+++|++|+|++|++++ +| .+..+++
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L-~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~ 116 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENL-RILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVN 116 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTC-CEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHH
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCC-CEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCC
Confidence 45555555555555555553 44 55555555 45555555555 344445555666666666666664 33 4666667
Q ss_pred CCEEeCcCCccccccc-hhhcCCCCCCEEeCCCCCcccccccc----------cccCCCCCeEEccCCccc
Q 040849 541 LEQLGMNGNFFQGNIP-SSFSSLRGIENLDLSRNNLSGRIPKY----------FENFLFLQNLNLSFNHFE 600 (809)
Q Consensus 541 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~LdLs~N~l~~~~p~~----------~~~l~~L~~l~ls~N~l~ 600 (809)
|++|++++|++++..+ ..+..+++|+.|++++|++++.+|.. +..+++|+.|| +|+++
T Consensus 117 L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 7777777777765332 45667777777777777776665543 66777777776 45444
No 152
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=4.4e-15 Score=142.49 Aligned_cols=132 Identities=20% Similarity=0.231 Sum_probs=84.6
Q ss_pred cccCCCCccEEeCCCCCCCccCCccccccc-cCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCC
Q 040849 94 HIGNLSFLRVLDLKNNSFRNEIPQEIGYLF-RLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSK 172 (809)
Q Consensus 94 ~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 172 (809)
.+.++.+|++|+|++|.++. +|. +..+. +|++|+|++|.+++. +.|..+++|++|+|++|.+++..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 45567777888888887774 343 44444 777777777777754 45777777777777777776554444567777
Q ss_pred CCEEEcccccCcccCCc--cCCCCCCCCEEEcccCcccccCcc----cccCCCCccEEEeecCcC
Q 040849 173 LRTLAVHYNNLSGQIPS--SFGNLSSLEVLSASANQFVGQIPK----TLSQLKRMRFIGFGVNKL 231 (809)
Q Consensus 173 L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~----~l~~l~~L~~L~L~~n~l 231 (809)
|++|+|++|+++ .+|. .+..+++|++|++++|.++. +|. .+..+++|+.|+++.|..
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 777777777775 3444 56666777777777776653 333 255555555555555543
No 153
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.55 E-value=1.5e-13 Score=149.50 Aligned_cols=196 Identities=11% Similarity=0.084 Sum_probs=100.9
Q ss_pred CCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCc
Q 040849 395 NLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLS 474 (809)
Q Consensus 395 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 474 (809)
+|+.+.+.+ .++...+.+|.+|++|+.+++++|+++......|. +.+|+.+.+.++ +..+...+|.++++|+.+++.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 344554443 34434444555555555555555555444333443 345555555422 444444455555555555555
Q ss_pred CCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccc-----cccCccccCCCCCCEEeCcCC
Q 040849 475 NNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLS-----GEIPNSLGSCVRLEQLGMNGN 549 (809)
Q Consensus 475 ~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N 549 (809)
.| ++..-..+|.+ .++ +.+.+ .|.++...+..|.++++|+.+++.+|.+. ...+.+|.+|++|+.++|. |
T Consensus 235 ~~-l~~I~~~aF~~-~~L-~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~ 309 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGI-TTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-E 309 (401)
T ss_dssp TT-CCEECTTTTTT-CCC-SEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-T
T ss_pred CC-ccCcccccccc-CCc-cEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-C
Confidence 43 33222223333 344 44555 33444444555666666666666655543 3445556666666666666 3
Q ss_pred ccccccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCccc
Q 040849 550 FFQGNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFE 600 (809)
Q Consensus 550 ~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 600 (809)
.++..-..+|.++++|+.++|..| ++...+.+|.++ +|+.+++++|.+.
T Consensus 310 ~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 310 SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 355555556666666666666433 555555566666 6666666666443
No 154
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.54 E-value=5.5e-15 Score=168.17 Aligned_cols=97 Identities=23% Similarity=0.351 Sum_probs=85.8
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
.++|++.+.||+|+||+||+|+.+..+ +.|||| +.++|||||++++++.. ++.
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg--~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-----~~~ 228 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATG--NNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-----DNE 228 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTC--CEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-----SSE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCC--CEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-----CCE
Confidence 367999999999999999999976544 489999 56899999999999654 788
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+|||||||+||+|.++|..+. ..+++.++..|++||++||+|||
T Consensus 229 ~~iv~E~~~gg~L~~~i~~~~---~~l~e~~~~~~~~qi~~al~ylH 272 (573)
T 3uto_A 229 MVMIYEFMSGGELFEKVADEH---NKMSEDEAVEYMRQVCKGLCHMH 272 (573)
T ss_dssp EEEEEECCCCCBHHHHHTCTT---SCEEHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeecCCCcHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997542 45899999999999999999998
No 155
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=2.2e-14 Score=136.53 Aligned_cols=108 Identities=20% Similarity=0.276 Sum_probs=80.5
Q ss_pred eEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCC
Q 040849 494 IYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRN 573 (809)
Q Consensus 494 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N 573 (809)
+.+++++|+++. +|..+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 356666666663 44443 267777888888887777777778888888888888888777777778888888888888
Q ss_pred CcccccccccccCCCCCeEEccCCcccccCC
Q 040849 574 NLSGRIPKYFENFLFLQNLNLSFNHFEGEVP 604 (809)
Q Consensus 574 ~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 604 (809)
+|++..+..|..+++|++|++++|++++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 8887777778888888888888888776554
No 156
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=6.9e-17 Score=158.40 Aligned_cols=155 Identities=23% Similarity=0.288 Sum_probs=95.1
Q ss_pred ccCCCCCCeeeCCCccceecCCc------cccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCcccc
Q 040849 390 LRNLVNLERLLLEGNQFTGRIPG------SIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLG 463 (809)
Q Consensus 390 l~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 463 (809)
+.....++.++++.+.+++..|. .+..+++|++|++++|++++ +| .+..+++|++|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 55667788888888888877765 56666666666666666664 34 5555555666666665555 3444444
Q ss_pred CCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccC-ccccCCCCCC
Q 040849 464 KCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIP-NSLGSCVRLE 542 (809)
Q Consensus 464 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~ 542 (809)
.+++|++|++++|+++ +. | .+..+++|++|++++|++++..+ ..+..+++|+
T Consensus 91 ~~~~L~~L~L~~N~l~-------------------------~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~ 143 (198)
T 1ds9_A 91 VADTLEELWISYNQIA-------------------------SL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLE 143 (198)
T ss_dssp HHHHCSEEEEEEEECC-------------------------CH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCS
T ss_pred cCCcCCEEECcCCcCC-------------------------cC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCC
Confidence 4445555555555554 32 2 34455566666666666664322 3566677777
Q ss_pred EEeCcCCccccccchh----------hcCCCCCCEEeCCCCCcc
Q 040849 543 QLGMNGNFFQGNIPSS----------FSSLRGIENLDLSRNNLS 576 (809)
Q Consensus 543 ~L~Ls~N~l~~~~p~~----------~~~l~~L~~LdLs~N~l~ 576 (809)
+|++++|++++.+|.. +..+++|+.|| +|.++
T Consensus 144 ~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 144 DLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 7777777776665542 67778888776 56555
No 157
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.53 E-value=1.3e-14 Score=155.39 Aligned_cols=97 Identities=21% Similarity=0.342 Sum_probs=83.7
Q ss_pred HhcccccccceeccCCceeEEEEEEC-CCCceeEEEEe------------------cCC-CCcceeeEeeeeeccccCCC
Q 040849 701 KATDGFSLENLIGAGSFGSVYKGILN-HDDHETLVAVK------------------RSI-RHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 701 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~~~~vavK------------------~~l-~H~niv~l~~~~~~~~~~~~ 760 (809)
...+.|+..+.||+|+||+||+|+.+ +..+++.|||| +.+ +|||||++++++.. +
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~-----~ 92 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRK-----N 92 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEE-----T
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEE-----C
Confidence 34577999999999999999999854 23356789999 234 79999999999765 7
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..|||||||++|+|.++++ .+++.++..|++|++.||+|||
T Consensus 93 ~~~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH 134 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIH 134 (361)
T ss_dssp TEEEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999984 2889999999999999999999
No 158
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.51 E-value=1.2e-12 Score=142.87 Aligned_cols=200 Identities=14% Similarity=0.061 Sum_probs=113.3
Q ss_pred CccccCCCCccEEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCC
Q 040849 92 SPHIGNLSFLRVLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLS 171 (809)
Q Consensus 92 ~~~l~~l~~L~~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 171 (809)
..+|.++++|+.++|.. .++.+-..+|.++++|+.+++.++ ++..-..+|.++.+|+.+.+..+ +.......|.+..
T Consensus 64 ~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 34677788888888864 366566677888888888888754 55455566778888877766543 3334445565554
Q ss_pred CCCEEEcccccCcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCceeccC
Q 040849 172 KLRTLAVHYNNLSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFP 251 (809)
Q Consensus 172 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 251 (809)
.++...... ........|.++++|+.+.+.++. .......|.++.+|+.+.+..+ ++......+.++..|+.+.+.
T Consensus 141 ~~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~ 216 (394)
T 4fs7_A 141 FKEITIPEG--VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFP 216 (394)
T ss_dssp CSEEECCTT--CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCC
T ss_pred ccccccCcc--ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecC
Confidence 433333222 222334567777777777776543 3344456677777777766554 443444556666666666655
Q ss_pred CcccccccChhhhcCCCCCcEEEccCccccccCCcccccCCCCceEecCCC
Q 040849 252 VNQLQGSLPSDLGFTLPNLERLNLGENQFTGPIPASISNASHLMRLTIPIN 302 (809)
Q Consensus 252 ~n~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n 302 (809)
.+... +....+ ...+|+.+.+..+ ++......+..+..++.+.+..+
T Consensus 217 ~~~~~--i~~~~~-~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~ 263 (394)
T 4fs7_A 217 NSLYY--LGDFAL-SKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNN 263 (394)
T ss_dssp TTCCE--ECTTTT-TTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCT
T ss_pred CCceE--eehhhc-ccCCCceEEECCC-ceecccccccccccceeEEcCCC
Confidence 44322 112222 3445555555432 22223334445555555555444
No 159
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.51 E-value=1.4e-14 Score=159.39 Aligned_cols=105 Identities=19% Similarity=0.240 Sum_probs=91.2
Q ss_pred cHHHHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeee
Q 040849 695 SYQNLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITS 751 (809)
Q Consensus 695 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~ 751 (809)
.+.++....++|+..++||+|+||+||+|+....+. .|||| +.++|||||+++++
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~--~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~ 142 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADK--VFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYA 142 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTE--EEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCc--EEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 345556667899999999999999999999776544 89999 35789999999999
Q ss_pred eeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 752 CASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 752 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
|.. ++..|+|||||++|+|.+++++. ...+++.++..|+.|++.||+|||
T Consensus 143 ~~~-----~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH 192 (437)
T 4aw2_A 143 FQD-----DNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVH 192 (437)
T ss_dssp EEC-----SSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred Eee-----CCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 765 78899999999999999999853 245899999999999999999998
No 160
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=5.2e-14 Score=134.37 Aligned_cols=107 Identities=22% Similarity=0.301 Sum_probs=80.4
Q ss_pred eEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCC
Q 040849 494 IYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRN 573 (809)
Q Consensus 494 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N 573 (809)
..+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|||++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 35677777765 4555443 67788888888888777777888888888888888888766666778888888888888
Q ss_pred CcccccccccccCCCCCeEEccCCcccccC
Q 040849 574 NLSGRIPKYFENFLFLQNLNLSFNHFEGEV 603 (809)
Q Consensus 574 ~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~ 603 (809)
+|++..+..|..+++|++|++++|++.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 888776667888888888888888877544
No 161
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.51 E-value=4.8e-13 Score=145.38 Aligned_cols=242 Identities=13% Similarity=0.073 Sum_probs=180.2
Q ss_pred CccEEeccccccccccchhhhhccccCcEEEccCCcccccCCccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEe
Q 040849 346 RLELLGININNFGGMLPEAVGNLSTRLRILRVGNNQLFGNIPSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGL 425 (809)
Q Consensus 346 ~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 425 (809)
+|+.+.+..+ +...-...+... +|+.+.+.. .+....+..|.++++|+.+++++|.++......|. +.+|+.+.+
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~--~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~l 210 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS--TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLL 210 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC--CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEEC
T ss_pred CccEEEeCCC-ccEECHHhcCCC--CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEe
Confidence 5777777655 443333444442 488888875 66666677888888888888888888866666776 578888888
Q ss_pred eCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCCceEEEccCCcCc-
Q 040849 426 QGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSLSIYLDLSQNQLN- 504 (809)
Q Consensus 426 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~- 504 (809)
..+ +.......|.++++|+.+++..| ++.+...+|.+ .+|+.+++ .+.++..-+..|.++.+| +.+++.+|.+.
T Consensus 211 p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L-~~l~l~~~~~~~ 285 (401)
T 4fdw_A 211 PVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPEL-AEVTTYGSTFND 285 (401)
T ss_dssp CTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTC-CEEEEESSCCCC
T ss_pred CCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCC-CEEEeCCccccC
Confidence 855 66667778888888888888865 56566677777 67888888 455664556777888888 68888887765
Q ss_pred ----ccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcccccc
Q 040849 505 ----GTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLSGRIP 580 (809)
Q Consensus 505 ----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p 580 (809)
...+..|.++++|+.++|. |+++.....+|.+|++|+.++|..| ++...+.+|.++ +|+.+++++|.+....+
T Consensus 286 ~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~ 362 (401)
T 4fdw_A 286 DPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFE 362 (401)
T ss_dssp CTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCC
T ss_pred CcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCccccc
Confidence 4566778888888888888 4577677778888888888888554 776777788888 88888888888877777
Q ss_pred cccccCC-CCCeEEccCCccc
Q 040849 581 KYFENFL-FLQNLNLSFNHFE 600 (809)
Q Consensus 581 ~~~~~l~-~L~~l~ls~N~l~ 600 (809)
..|..++ .++.+++..|.+.
T Consensus 363 ~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 363 KVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SSCCCSCTTCCEEEECGGGHH
T ss_pred ccccCCCCCccEEEeCHHHHH
Confidence 7777774 6777777666543
No 162
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.51 E-value=2.9e-14 Score=151.71 Aligned_cols=112 Identities=41% Similarity=0.641 Sum_probs=98.7
Q ss_pred ccccccHHHHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeE
Q 040849 690 SVLRVSYQNLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKI 748 (809)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l 748 (809)
....+++.++....++|...+.||+|+||+||+|+..++ +.|||| +.++||||+++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~ 92 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADG---TLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 92 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSS---CCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCC---CEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccce
Confidence 455788899999999999999999999999999985433 379999 46889999999
Q ss_pred eeeeeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 749 ITSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 749 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+++|.. ++..++|||||++|+|.++++.+......++|.++..|+.|+++||+|||
T Consensus 93 ~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 148 (326)
T 3uim_A 93 RGFCMT-----PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 148 (326)
T ss_dssp CEEECC-----SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEec-----CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999765 67789999999999999999876555566999999999999999999998
No 163
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.49 E-value=2.5e-14 Score=151.81 Aligned_cols=108 Identities=38% Similarity=0.584 Sum_probs=92.1
Q ss_pred ccHHHHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCcceeeEeeeee
Q 040849 694 VSYQNLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHRNLVKIITSCA 753 (809)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~niv~l~~~~~ 753 (809)
+++.++...+++|+..+.||+|+||+||+|+..+ ++.|||| +.++|||||++++++.
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 105 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD---GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTT---CCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECC
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECC---CCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence 4445556678899999999999999999999643 3389999 5789999999999976
Q ss_pred ccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 754 SVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 754 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
. ++..++|||||++|+|.+++.........++|.++..++.|+++||+|||
T Consensus 106 ~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 156 (321)
T 2qkw_B 106 E-----RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156 (321)
T ss_dssp C-----TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred C-----CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc
Confidence 4 67899999999999999999866444456999999999999999999998
No 164
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=1.1e-13 Score=131.52 Aligned_cols=104 Identities=24% Similarity=0.283 Sum_probs=55.8
Q ss_pred EEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEccccc
Q 040849 103 VLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNN 182 (809)
Q Consensus 103 ~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 182 (809)
++|+++|.++. +|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 44455555542 343332 455555555555555555555555555555555555555444445555555555555555
Q ss_pred CcccCCccCCCCCCCCEEEcccCcccc
Q 040849 183 LSGQIPSSFGNLSSLEVLSASANQFVG 209 (809)
Q Consensus 183 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 209 (809)
+++..+..|.++++|++|+|++|.++.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 554444455555555555555555543
No 165
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.48 E-value=3.1e-12 Score=139.68 Aligned_cols=67 Identities=6% Similarity=-0.001 Sum_probs=36.7
Q ss_pred CcccCCccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecCcCCCCcchhccCCCCCceeccC
Q 040849 183 LSGQIPSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFP 251 (809)
Q Consensus 183 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 251 (809)
++.....+|.++.+|+.+.+..+ ++.....+|.++++|+.+++..+ ++......|.++++|+.+.+.
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p 125 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLP 125 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhccc
Confidence 34344456777777777777533 55455556666666666666533 333333445555555544433
No 166
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.47 E-value=4.2e-14 Score=154.33 Aligned_cols=102 Identities=20% Similarity=0.277 Sum_probs=88.7
Q ss_pred HHHHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeee
Q 040849 696 YQNLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSC 752 (809)
Q Consensus 696 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~ 752 (809)
+.++....++|+..++||+|+||+||+|+....+. .||+| +.++|||||++++++
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~--~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~ 138 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRK--VYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF 138 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCc--EEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 34455667889999999999999999999766544 89999 357899999999997
Q ss_pred eccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 753 ASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 753 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.. ++..|+|||||++|+|.+++++. .+++..+..++.||+.||+|||
T Consensus 139 ~~-----~~~~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH 185 (410)
T 3v8s_A 139 QD-----DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIH 185 (410)
T ss_dssp EC-----SSEEEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EE-----CCEEEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH
Confidence 65 78899999999999999999743 4899999999999999999998
No 167
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.46 E-value=1.2e-13 Score=145.79 Aligned_cols=97 Identities=25% Similarity=0.423 Sum_probs=85.9
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
.++|...+.||+|+||+||+|+....+. .||+| +.++|||||++++++.. ++.
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~--~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 81 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGE--VMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-----DKR 81 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCC--EEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCc--EEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-----CCe
Confidence 3578899999999999999999765544 89999 57899999999999876 678
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++|||||++|+|.++++... ..++|.++..|+.|+++||+|||
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH 125 (310)
T 3s95_A 82 LNFITEYIKGGTLRGIIKSMD---SQYPWSQRVSFAKDIASGMAYLH 125 (310)
T ss_dssp EEEEEECCTTCBHHHHHHHCC---TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998532 45899999999999999999998
No 168
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=2.7e-13 Score=129.39 Aligned_cols=103 Identities=27% Similarity=0.372 Sum_probs=54.4
Q ss_pred EEeCCCCCCCccCCccccccccCCccccCCCcCcccCCccccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEccccc
Q 040849 103 VLDLKNNSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNN 182 (809)
Q Consensus 103 ~LdLs~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 182 (809)
.+++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4455555553 3444332 455555555555555555555555555555555555554444445555555555555555
Q ss_pred CcccCCccCCCCCCCCEEEcccCccc
Q 040849 183 LSGQIPSSFGNLSSLEVLSASANQFV 208 (809)
Q Consensus 183 l~~~~p~~~~~l~~L~~L~Ls~N~l~ 208 (809)
+++..+..|..+++|++|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 55444444555555555555555554
No 169
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.45 E-value=1.7e-13 Score=145.30 Aligned_cols=106 Identities=28% Similarity=0.288 Sum_probs=89.0
Q ss_pred ccccHHHHHHhccc----------ccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCC
Q 040849 692 LRVSYQNLFKATDG----------FSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIR 741 (809)
Q Consensus 692 ~~~~~~~~~~~~~~----------~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~ 741 (809)
..++++++..+++. |+..+.||+|+||+||+|+....+. .|||| +.++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~--~vavK~~~~~~~~~~~~~~~E~~~l~~l~ 100 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGR--QVAVKMMDLRKQQRRELLFNEVVIMRDYQ 100 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEETTTCCSHHHHHHHHHHHTTCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCc--EEEEEEEeccchhHHHHHHHHHHHHHhCC
Confidence 34666676666543 6677899999999999999765444 89999 5789
Q ss_pred CcceeeEeeeeeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 742 HRNLVKIITSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 742 H~niv~l~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
|||||++++++.. ++..++||||+++|+|.+++... .++|.++..++.|+++||+|||
T Consensus 101 h~niv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH 158 (321)
T 2c30_A 101 HFNVVEMYKSYLV-----GEELWVLMEFLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLH 158 (321)
T ss_dssp CTTBCCEEEEEEE-----TTEEEEEECCCCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcceEEEEEEE-----CCEEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999876 67899999999999999998743 4899999999999999999998
No 170
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.45 E-value=7e-14 Score=152.70 Aligned_cols=106 Identities=20% Similarity=0.265 Sum_probs=90.9
Q ss_pred ccHHHHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEee
Q 040849 694 VSYQNLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIIT 750 (809)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~ 750 (809)
+.+.+.....++|+..+.||+|+||+||+|+....+. .|||| ..++|||||++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~--~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~ 128 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQ--VYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHF 128 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCC--EEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCC--EEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEE
Confidence 3445556667899999999999999999999765444 89999 3578999999999
Q ss_pred eeeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 751 SCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 751 ~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++.. ++..|+|||||++|+|.+++++.+ ..+++..+..|+.||+.||+|||
T Consensus 129 ~~~~-----~~~~~lVmE~~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~LH 179 (412)
T 2vd5_A 129 AFQD-----ENYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAIDSVH 179 (412)
T ss_dssp EEEC-----SSEEEEEECCCCSCBHHHHHHHHS---SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEee-----CCEEEEEEcCCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9765 788999999999999999997532 35899999999999999999998
No 171
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.44 E-value=2e-13 Score=140.82 Aligned_cols=98 Identities=23% Similarity=0.376 Sum_probs=84.0
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|...+.||+|+||+||+|+.. +. .|||| +.++|||||++++++... +.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~--~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~ 81 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GN--DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP---PA 81 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TE--EEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT---TS
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--Ce--eEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC---CC
Confidence 356889999999999999999974 23 79999 567999999999998651 13
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++||||+++|+|.++++... ...+++.++..|+.|+++||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH 128 (271)
T 3kmu_A 82 PHPTLITHWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLH 128 (271)
T ss_dssp SSCEEEEECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCeEeeecccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHh
Confidence 67899999999999999998643 235899999999999999999999
No 172
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.44 E-value=1.9e-13 Score=144.75 Aligned_cols=97 Identities=23% Similarity=0.354 Sum_probs=85.5
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccCCCceE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~~~~~~ 763 (809)
.++|...+.||+|+||+||+|+....+ +.||+| +.++|||||++++++.. .+..
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~--~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-----~~~~ 76 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSK--KTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES-----MEEL 76 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-----TTEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCC--cEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEec-----CCEE
Confidence 467899999999999999999976544 489999 56899999999999765 7789
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 764 ALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 764 ~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++|||||++|+|.+++... ...+++.++..++.|+++||+|||
T Consensus 77 ~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH 119 (321)
T 1tki_A 77 VMIFEFISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLH 119 (321)
T ss_dssp EEEECCCCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999754 245899999999999999999998
No 173
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.43 E-value=2e-13 Score=143.75 Aligned_cols=110 Identities=35% Similarity=0.506 Sum_probs=94.3
Q ss_pred ccccccHHHHHHhccccccc------ceeccCCceeEEEEEECCCCceeEEEEe------------------------cC
Q 040849 690 SVLRVSYQNLFKATDGFSLE------NLIGAGSFGSVYKGILNHDDHETLVAVK------------------------RS 739 (809)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~------~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------------~~ 739 (809)
....+++.++..++.+|... +.||+|+||+||+|+.. +. .|||| +.
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~--~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~ 86 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAK 86 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESS--SC--EEEEEEECCCTTSCTTTHHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEEC--Cc--eEEEEEEecccCcchHHHHHHHHHHHHHHHh
Confidence 34568899999999998877 89999999999999953 23 79998 46
Q ss_pred CCCcceeeEeeeeeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 740 IRHRNLVKIITSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 740 l~H~niv~l~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++||||+++++++.. ++..++||||+++|+|.+++.... ....++|..+..++.|+++||+|||
T Consensus 87 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH 150 (307)
T 2nru_A 87 CQHENLVELLGFSSD-----GDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLH 150 (307)
T ss_dssp CCCTTBCCEEEEECS-----SSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEEEec-----CCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 789999999999765 677999999999999999997543 2346899999999999999999998
No 174
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.43 E-value=1.8e-13 Score=143.38 Aligned_cols=95 Identities=24% Similarity=0.355 Sum_probs=84.0
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
.+.|+..+.||+|+||+||+|..... ++.|||| +.++|||||++++++.. ++.
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 91 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVAT--GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDE 91 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTT--CCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCC--CcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-----CCE
Confidence 45799999999999999999996544 3489999 46899999999999776 678
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++|||||++|+|.+++... .+++.++..++.|+++||+|||
T Consensus 92 ~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH 133 (297)
T 3fxz_A 92 LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLH 133 (297)
T ss_dssp EEEEEECCTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999743 4899999999999999999998
No 175
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.43 E-value=2.4e-13 Score=146.12 Aligned_cols=96 Identities=22% Similarity=0.330 Sum_probs=84.8
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------------cCCCCcceeeEeeeeeccc
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------------RSIRHRNLVKIITSCASVD 756 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------------~~l~H~niv~l~~~~~~~~ 756 (809)
.+.|+..+.||+|+||+||+|+....+. .|||| +.++|||||++++++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~--~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-- 86 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGL--EYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN-- 86 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC--
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCC--EEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe--
Confidence 4568999999999999999999765444 89999 46789999999999765
Q ss_pred cCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 757 FQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 757 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++|+|.+++... ..+++.++..++.||+.||+|||
T Consensus 87 ---~~~~~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH 132 (361)
T 2yab_A 87 ---RTDVVLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLH 132 (361)
T ss_dssp ---SSEEEEEEECCCSCBHHHHHTTC----SCCBHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCEEEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999743 45899999999999999999998
No 176
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.43 E-value=9e-14 Score=149.30 Aligned_cols=99 Identities=24% Similarity=0.345 Sum_probs=85.3
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------------cCCCCcceeeEeeeeeccccC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
+.|+..+.||+|+||+||+|+....+. .|||| +.++|||||++++++..
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---- 97 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQ--QFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS---- 97 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE----
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCC--EEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe----
Confidence 468999999999999999999765444 89999 35789999999999765
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++|+|.+++..+......+++..+..++.||++||+|||
T Consensus 98 -~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH 147 (351)
T 3c0i_A 98 -DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147 (351)
T ss_dssp -TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999888654323346899999999999999999998
No 177
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.43 E-value=6.1e-14 Score=152.23 Aligned_cols=101 Identities=29% Similarity=0.514 Sum_probs=87.3
Q ss_pred HHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeecccc
Q 040849 699 LFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDF 757 (809)
Q Consensus 699 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~ 757 (809)
+....++|...+.||+|+||+||+|+....+. .|||| +.++|||||+++++|..
T Consensus 109 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--- 183 (377)
T 3cbl_A 109 WVLNHEDLVLGEQIGRGNFGEVFSGRLRADNT--LVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--- 183 (377)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTCC--EEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred cEEchHHeEEeeEeccCCCCeEEEEEEecCCe--EEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec---
Confidence 33445678999999999999999999875544 89999 57899999999999865
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++|+|.++++.. ...+++.++..++.|||+||+|||
T Consensus 184 --~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH 230 (377)
T 3cbl_A 184 --KQPIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLE 230 (377)
T ss_dssp --SSSCEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCcEEEEEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 67799999999999999999743 235899999999999999999998
No 178
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.43 E-value=1.8e-13 Score=145.16 Aligned_cols=96 Identities=22% Similarity=0.380 Sum_probs=84.9
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
.++|+..+.||+|+||+||+|+....+. .|||| +.++|||||++++++.. ++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-----~~ 78 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEE--AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-----GN 78 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCc--EEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec-----CC
Confidence 3579999999999999999999765444 89999 46799999999999765 77
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..|+|||||++|+|.++++.. ..+++.++..|+.|+++||+|||
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH 122 (323)
T 3tki_A 79 IQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLH 122 (323)
T ss_dssp EEEEEEECCTTEEGGGGSBTT----TBCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999744 35899999999999999999998
No 179
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.43 E-value=1.7e-13 Score=146.26 Aligned_cols=97 Identities=20% Similarity=0.347 Sum_probs=85.5
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
..+.|+..+.||+|+||+||+|+....+. .|||| +.++|||||++++++.. .
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~--~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-----~ 80 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGE--MVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET-----A 80 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCC--EEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEEC-----S
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCC--EEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEe-----C
Confidence 35679999999999999999999765444 89999 46899999999999765 7
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++|||||++|+|.+++... ..+++.++..++.|++.||+|||
T Consensus 81 ~~~~lv~E~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH 125 (347)
T 3zgw_A 81 NKIFMVLEYCPGGELFDYIISQ----DRLSEEETRVVFRQIVSAVAYVH 125 (347)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999743 35899999999999999999998
No 180
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.43 E-value=1.2e-13 Score=146.68 Aligned_cols=97 Identities=23% Similarity=0.317 Sum_probs=85.4
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
..++|+..+.||+|+||+||+|+....+. .|||| +.++|||||++++++..
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----- 85 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGR--EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET----- 85 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCC--EEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----
Confidence 35679999999999999999999755444 89999 46799999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++|+|.+++..+ ..+++.++..++.|+++||+|||
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH 131 (328)
T 3fe3_A 86 EKTLYLIMEYASGGEVFDYLVAH----GRMKEKEARSKFRQIVSAVQYCH 131 (328)
T ss_dssp SSEEEEEECCCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999743 34899999999999999999998
No 181
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.43 E-value=2.1e-13 Score=144.05 Aligned_cols=96 Identities=22% Similarity=0.325 Sum_probs=84.8
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|+..+.||+|+||+||+|+....+. .||+| +.++|||||++++++..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~----- 77 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGR--YYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD----- 77 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCC--EEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-----
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCC--EEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-----
Confidence 3578999999999999999999765444 89999 46799999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..|+|||||++|+|.++++.. ..+++..+..++.||+.||+|||
T Consensus 78 ~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH 123 (318)
T 1fot_A 78 AQQIFMIMDYIEGGELFSLLRKS----QRFPNPVAKFYAAEVCLALEYLH 123 (318)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHT----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999753 35899999999999999999998
No 182
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.42 E-value=1.5e-13 Score=148.74 Aligned_cols=98 Identities=29% Similarity=0.508 Sum_probs=83.9
Q ss_pred ccccccceeccCCceeEEEEEECCC-CceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHD-DHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~-~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
++|+..+.||+|+||+||+|+.... ..++.|||| +.++|||||++++++.. ++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~ 119 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-----SK 119 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----SS
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-----CC
Confidence 5789999999999999999986521 234479999 57899999999999765 67
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++|||||++|+|.++++..+ ..+++.++..|+.||++||+|||
T Consensus 120 ~~~lv~e~~~~~sL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH 164 (373)
T 2qol_A 120 PVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLS 164 (373)
T ss_dssp SCEEEEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999998542 45899999999999999999998
No 183
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.42 E-value=2e-13 Score=145.26 Aligned_cols=96 Identities=26% Similarity=0.340 Sum_probs=84.7
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|+..+.||+|+||+||+|+....+. .|||| +.++||||+++++++..
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~----- 76 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGR--YYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT----- 76 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-----
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCC--EEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-----
Confidence 3579999999999999999999765444 89999 46899999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..|+|||||++|+|.+++.+. ..+++.++..++.||+.||+|||
T Consensus 77 ~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH 122 (337)
T 1o6l_A 77 HDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALEYLH 122 (337)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999743 35899999999999999999998
No 184
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.42 E-value=2.5e-13 Score=146.62 Aligned_cols=96 Identities=30% Similarity=0.403 Sum_probs=84.2
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe------------------------cCCCCcceeeEeeeeeccccC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
.++|+..+.||+|+||+||+|+....+. .|||| +.++|||||++++++..
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~--~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~---- 110 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEV--FYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT---- 110 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCC--EEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC----
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCC--EEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe----
Confidence 4579999999999999999999765544 89999 34689999999999765
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..|+|||||++|+|.+++++. ..+++.++..++.||+.||+|||
T Consensus 111 -~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH 156 (373)
T 2r5t_A 111 -ADKLYFVLDYINGGELFYHLQRE----RCFLEPRARFYAAEIASALGYLH 156 (373)
T ss_dssp -SSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999743 35889999999999999999998
No 185
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.42 E-value=2.8e-13 Score=143.63 Aligned_cols=98 Identities=28% Similarity=0.363 Sum_probs=83.3
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
..++|+..+.||+|+||+||+|+..+ +.|||| +.++|||||++++++.... .....
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~ 96 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLLN----EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVD 96 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEETT----EEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEE
T ss_pred chhhchhhheecccCceEEEEEEECC----CEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCce
Confidence 34679999999999999999998652 389999 4689999999999987521 11345
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++|||||++|+|.++++.. .++|.++..|+.|+++||+|||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH 138 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLH 138 (322)
T ss_dssp EEEEEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999743 3899999999999999999999
No 186
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.41 E-value=2.5e-13 Score=146.82 Aligned_cols=102 Identities=24% Similarity=0.469 Sum_probs=85.3
Q ss_pred cccccccceeccCCceeEEEEEECC-----CCceeEEEEe---------------------cCC-CCcceeeEeeeeecc
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNH-----DDHETLVAVK---------------------RSI-RHRNLVKIITSCASV 755 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~~~vavK---------------------~~l-~H~niv~l~~~~~~~ 755 (809)
.++|...+.||+|+||+||+|+... ...+..|||| +.+ +|||||+++++|..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~- 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS-
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc-
Confidence 4678999999999999999998642 1244579999 345 89999999999765
Q ss_pred ccCCCceEEEEEeccCCCChhhhhcCCCC------------CCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 756 DFQGNDFKALVYEFMVNGSLEEWLHPKPE------------APRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 756 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++|+|.++++..+. ....+++.++..++.||++||+|||
T Consensus 159 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 220 (370)
T 2psq_A 159 ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA 220 (370)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 6779999999999999999985431 1245899999999999999999998
No 187
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.41 E-value=3.1e-13 Score=140.46 Aligned_cols=93 Identities=16% Similarity=0.192 Sum_probs=80.9
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
+.|+..+.||+|+||.||+|+.... ++.|||| +.++|||||++++++.. +
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~ 103 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTAL--DRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-----R 103 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTT--TEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----T
T ss_pred CcEEEEEEEcccCCeEEEEEEecCC--CceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-----C
Confidence 5699999999999999999997654 3489999 47899999999999765 6
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..|+|||||++|+|.++++.. ....++.+|+.|+++||+|||
T Consensus 104 ~~~~lv~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH 146 (286)
T 3uqc_A 104 AGGLVVAEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAH 146 (286)
T ss_dssp TEEEEEEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999532 355678999999999999998
No 188
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.41 E-value=3e-13 Score=143.57 Aligned_cols=98 Identities=26% Similarity=0.468 Sum_probs=84.9
Q ss_pred ccccccceeccCCceeEEEEEECCCC-ceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDD-HETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~-~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
+.|...+.||+|+||+||+|+....+ .+..|||| +.++|||||++++++.. ++
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 123 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR-----GR 123 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG-----GG
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----CC
Confidence 56888999999999999999976432 33469999 57899999999999765 67
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++|||||++|+|.++++... ..+++.++..|+.|+++||+|||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH 168 (325)
T 3kul_A 124 LAMIVTEYMENGSLDTFLRTHD---GQFTIMQLVGMLRGVGAGMRYLS 168 (325)
T ss_dssp CCEEEEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEeeCCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999997542 45899999999999999999998
No 189
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.41 E-value=1.5e-13 Score=148.39 Aligned_cols=102 Identities=29% Similarity=0.498 Sum_probs=85.4
Q ss_pred cccccccceeccCCceeEEEEEECC---CCceeEEEEe---------------------cCCCCcceeeEeeeeeccccC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
.++|...+.||+|+||+||+|++.. ...++.|||| +.++|||||++++++..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---- 145 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ---- 145 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 3578899999999999999999653 2244589999 46799999999999765
Q ss_pred CCceEEEEEeccCCCChhhhhcCCC---CCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKP---EAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~---~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+...++|||||++|+|.++++..+ .....+++.+++.|+.||++||+|||
T Consensus 146 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 198 (367)
T 3l9p_A 146 -SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198 (367)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH
Confidence 667899999999999999997543 12345899999999999999999998
No 190
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.41 E-value=3e-13 Score=146.21 Aligned_cols=96 Identities=26% Similarity=0.351 Sum_probs=85.3
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|...+.||+|+||+||+|+....+. .||+| +.++|||||++++++..
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~--~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~----- 86 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKK--MYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD----- 86 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCC--EEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCC--EEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----
Confidence 3579999999999999999999765544 89999 46899999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..|+|||||++|+|.++++.. ..+++.++..|+.||+.||+|||
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH 132 (384)
T 4fr4_A 87 EEDMFMVVDLLLGGDLRYHLQQN----VHFKEETVKLFICELVMALDYLQ 132 (384)
T ss_dssp SSEEEEEECCCTTEEHHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999853 45899999999999999999998
No 191
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.41 E-value=2.3e-13 Score=145.21 Aligned_cols=98 Identities=21% Similarity=0.399 Sum_probs=84.4
Q ss_pred HhcccccccceeccCCceeEEEEEECCCCceeEEEEe------------------------cCCCCcceeeEeeeeeccc
Q 040849 701 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------------RSIRHRNLVKIITSCASVD 756 (809)
Q Consensus 701 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------------~~l~H~niv~l~~~~~~~~ 756 (809)
...++|...+.||+|+||+||+|+....+ +.|||| ...+|||||++++++..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~-- 89 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTN--QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT-- 89 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTT--EEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC--
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCC--CEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe--
Confidence 34578999999999999999999976544 489999 12489999999999765
Q ss_pred cCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 757 FQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 757 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++|+|.++++.. ..+++.++..++.||+.||+|||
T Consensus 90 ---~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH 135 (345)
T 1xjd_A 90 ---KENLFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGLQFLH 135 (345)
T ss_dssp ---SSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999743 35899999999999999999998
No 192
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.41 E-value=3.1e-13 Score=141.34 Aligned_cols=95 Identities=19% Similarity=0.352 Sum_probs=84.4
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
+.|+..+.||+|+||.||+|+....+. .||+| +.++||||+++++++.. +
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~ 83 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNI--KVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-----D 83 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCS--EEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-----S
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCC--eEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-----C
Confidence 568999999999999999999665544 89999 46899999999999765 7
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..|+||||+++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 84 ~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH 128 (294)
T 4eqm_A 84 DCYYLVMEYIEGPTLSEYIESH----GPLSVDTAINFTNQILDGIKHAH 128 (294)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999743 35899999999999999999998
No 193
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.40 E-value=1.4e-13 Score=143.47 Aligned_cols=100 Identities=25% Similarity=0.398 Sum_probs=85.4
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCC-CCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSI-RHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l-~H~niv~l~~~~~~~~~~~ 759 (809)
.++|+..+.||+|+||+||+|+....+. .|||| ..+ +||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~----- 82 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGC--IYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE----- 82 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-----
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCc--eEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-----
Confidence 3568999999999999999999765444 89999 233 89999999999876
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++|||||++|+|.+++.........+++.++..|+.|+++||+|||
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH 132 (289)
T 1x8b_A 83 DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 132 (289)
T ss_dssp TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999754222245899999999999999999998
No 194
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.40 E-value=2.7e-13 Score=145.19 Aligned_cols=105 Identities=30% Similarity=0.467 Sum_probs=88.2
Q ss_pred HHhcccccccceeccCCceeEEEEEECCC---CceeEEEEe---------------------cCCCCcceeeEeeeeecc
Q 040849 700 FKATDGFSLENLIGAGSFGSVYKGILNHD---DHETLVAVK---------------------RSIRHRNLVKIITSCASV 755 (809)
Q Consensus 700 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~---~~~~~vavK---------------------~~l~H~niv~l~~~~~~~ 755 (809)
....++|+..+.||+|+||+||+|+.... ..++.|||| +.++||||+++++++..
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~- 121 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV- 121 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-
Confidence 34467899999999999999999997642 244689999 57899999999999765
Q ss_pred ccCCCceEEEEEeccCCCChhhhhcCCCCC--------------------CCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 756 DFQGNDFKALVYEFMVNGSLEEWLHPKPEA--------------------PRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 756 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~--------------------~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++|||||++|+|.++++..... ...+++.+++.|+.||++||+|||
T Consensus 122 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH 191 (343)
T 1luf_A 122 ----GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS 191 (343)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 67799999999999999999754211 256899999999999999999998
No 195
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.40 E-value=2.6e-13 Score=146.36 Aligned_cols=112 Identities=23% Similarity=0.322 Sum_probs=90.7
Q ss_pred ccHHHHHHhcccccccceeccCCceeEEEEEECC---CCceeEEEEe---------------------cCC-CCcceeeE
Q 040849 694 VSYQNLFKATDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVK---------------------RSI-RHRNLVKI 748 (809)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~~~vavK---------------------~~l-~H~niv~l 748 (809)
+...++....++|...+.||+|+||.||+|++.. ...++.|||| +.+ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 3445666778899999999999999999998542 2345689999 234 79999999
Q ss_pred eeeeeccccCCCceEEEEEeccCCCChhhhhcCCCCC-------------------------------------------
Q 040849 749 ITSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEA------------------------------------------- 785 (809)
Q Consensus 749 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~------------------------------------------- 785 (809)
+++|.. .+...++|||||++|+|.++++.+...
T Consensus 92 ~~~~~~----~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (359)
T 3vhe_A 92 LGACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGF 167 (359)
T ss_dssp EEEECS----TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------
T ss_pred eeeeec----CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccc
Confidence 999865 245589999999999999999865321
Q ss_pred -------------------CCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 786 -------------------PRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 786 -------------------~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
...+++.++..|+.|+++||+|||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH 210 (359)
T 3vhe_A 168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 210 (359)
T ss_dssp ----------------CTTTTCBCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH
Confidence 122899999999999999999998
No 196
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.40 E-value=4e-13 Score=140.98 Aligned_cols=97 Identities=28% Similarity=0.419 Sum_probs=82.6
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccCCCceE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~~~~~~ 763 (809)
.++|+..+.||+|+||+||+|+.. ++.|||| ..++||||+++++++... ..+....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~-~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQ----GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS-RHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEET----TEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE-ETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEEC----CEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccc-cCCCcee
Confidence 457999999999999999999963 2389999 238999999999987652 2234668
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 764 ALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 764 ~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++|||||++|+|.++++. ..+++.++..|+.|+++||+|||
T Consensus 82 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH 122 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLH 122 (301)
T ss_dssp EEEECCCTTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHH
T ss_pred EEehhhccCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999964 34899999999999999999998
No 197
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.40 E-value=4.8e-13 Score=143.47 Aligned_cols=96 Identities=23% Similarity=0.313 Sum_probs=84.7
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe------------------cCCCCcceeeEeeeeeccccCCCceEE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------RSIRHRNLVKIITSCASVDFQGNDFKA 764 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------~~l~H~niv~l~~~~~~~~~~~~~~~~ 764 (809)
.+.|+..+.||+|+||+||+|+....+. .|||| ++++|||||++++++.. ++..+
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~--~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~ 124 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQK--PYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFET-----PTEIS 124 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEEC----------CHHHHHCCCTTBCCEEEEEEC-----SSEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCc--EEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEec-----CCeEE
Confidence 4568899999999999999999765444 89999 46789999999999765 67899
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 765 LVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 765 lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+||||+++|+|.+++..+ ..+++.++..++.|+++||+|||
T Consensus 125 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~L~~LH 165 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVEK----GYYSERDAADAVKQILEAVAYLH 165 (349)
T ss_dssp EEECCCCSCBHHHHHTTC----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999754 35899999999999999999998
No 198
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.40 E-value=2.7e-13 Score=146.04 Aligned_cols=96 Identities=26% Similarity=0.337 Sum_probs=85.0
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccCCCceE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~~~~~~ 763 (809)
.++|...+.||+|+||+||+|+....+. .|||| +.++|||||++++++.. ++..
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~~ 91 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKE--LVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT-----PTHL 91 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCC--EEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCc--EEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEee-----CCEE
Confidence 4579999999999999999999765444 89999 46899999999999765 7789
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 764 ALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 764 ~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++|||||++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 92 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~ql~~~L~~LH 133 (361)
T 3uc3_A 92 AIIMEYASGGELYERICNA----GRFSEDEARFFFQQLLSGVSYCH 133 (361)
T ss_dssp EEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999743 35899999999999999999998
No 199
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.40 E-value=3.5e-13 Score=145.19 Aligned_cols=96 Identities=21% Similarity=0.387 Sum_probs=84.8
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|+..+.||+|+||.||+|.....+. .|||| +.++|||||++++++.. +
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~--~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-----~ 100 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGL--EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----E 100 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----S
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----C
Confidence 4579999999999999999999765444 89999 45899999999999765 7
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..|+|||||++|+|.+++..+ ..+++.++..++.||++||+|||
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH 145 (362)
T 2bdw_A 101 SFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCH 145 (362)
T ss_dssp SEEEEEECCCCSCBHHHHHTTC----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999754 45899999999999999999998
No 200
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.40 E-value=5.6e-13 Score=144.59 Aligned_cols=97 Identities=16% Similarity=0.317 Sum_probs=85.4
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
.+.|+..+.||+|+||+||+|.....+. .||+| +.++|||||++++++.. +..
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~--~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-----~~~ 122 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGR--VFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-----KYE 122 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-----SSE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCC--EEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-----CCE
Confidence 3579999999999999999999765444 89999 57899999999999765 778
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++|||||++|+|.+++... ...+++.++..++.||++||+|||
T Consensus 123 ~~lv~E~~~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH 166 (387)
T 1kob_A 123 MVLILEFLSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMH 166 (387)
T ss_dssp EEEEEECCCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999754 245899999999999999999998
No 201
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.40 E-value=3.7e-13 Score=143.67 Aligned_cols=96 Identities=23% Similarity=0.383 Sum_probs=83.9
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------cCCCCcceeeEeeeeeccccCCCceEEE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------RSIRHRNLVKIITSCASVDFQGNDFKAL 765 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------~~l~H~niv~l~~~~~~~~~~~~~~~~l 765 (809)
.++|+..+.||+|+||+||+|+....+ +.|||| +..+|||||++++++.. ++..|+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~--~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~-----~~~~~l 93 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATN--MEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDD-----GKYVYV 93 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEEC-----SSEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCC--CEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEc-----CCEEEE
Confidence 457999999999999999999976544 489999 12379999999999765 788999
Q ss_pred EEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 766 VYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 766 v~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
|||||++|+|.+++..+ ..+++.++..++.||++||+|||
T Consensus 94 v~E~~~gg~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH 133 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQ----KFFSEREASAVLFTITKTVEYLH 133 (342)
T ss_dssp EECCCCSCBHHHHHHTC----TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999754 35899999999999999999998
No 202
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.40 E-value=1e-13 Score=155.95 Aligned_cols=101 Identities=28% Similarity=0.525 Sum_probs=87.1
Q ss_pred HHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 700 FKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 700 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
....++|+..+.||+|+||+||+|++...+ +.|||| ++++|||||+++++|.. +
T Consensus 216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~--~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-----~ 288 (495)
T 1opk_A 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-----E 288 (495)
T ss_dssp BCCGGGEEEEEESGGGTTSSEEEEEEGGGT--EEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-----S
T ss_pred ccCHHHceeeeEecCCCCeEEEEEEEcCCC--eEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEec-----C
Confidence 344567889999999999999999987543 489999 46899999999999865 6
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..|+|||||++|+|.++++... ...+++..+..|+.|||+||+|||
T Consensus 289 ~~~~lv~E~~~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~LH 335 (495)
T 1opk_A 289 PPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE 335 (495)
T ss_dssp SSCEEEEECCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEccCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 77999999999999999997542 245899999999999999999998
No 203
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.40 E-value=4.1e-13 Score=143.03 Aligned_cols=103 Identities=19% Similarity=0.367 Sum_probs=83.2
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeecccc-----
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDF----- 757 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~----- 757 (809)
++|+..+.||+|+||+||+|+....+. .|||| ++++|||||++++++.....
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDC--NYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCC--EEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCc--EEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 568899999999999999999765444 89999 57899999999998754210
Q ss_pred -----------------------------------------------CCCceEEEEEeccCCCChhhhhcCCCCCCCCCC
Q 040849 758 -----------------------------------------------QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSN 790 (809)
Q Consensus 758 -----------------------------------------------~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~ 790 (809)
......++|||||++|+|.++++.+. .....+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~ 162 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDRE 162 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSC
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-Cccchh
Confidence 11224899999999999999998654 233467
Q ss_pred HHHHHHHHHHHHHHhhhcC
Q 040849 791 LLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 791 ~~~~~~i~~~ia~gl~yLH 809 (809)
+..+..++.|+++||+|||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH 181 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLH 181 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999998
No 204
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.40 E-value=3.3e-13 Score=144.62 Aligned_cols=97 Identities=28% Similarity=0.385 Sum_probs=83.7
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCC-CCcceeeEeeeeecccc
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSI-RHRNLVKIITSCASVDF 757 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l-~H~niv~l~~~~~~~~~ 757 (809)
..++|+..+.||+|+||+||+|+....+. .|||| +.+ +|||||++++++..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~--~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~--- 95 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGD--LYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT--- 95 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCC--EEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe---
Confidence 34689999999999999999999765544 89999 123 79999999999765
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++|+|.+++++. ..+++.++..|+.||+.||+|||
T Consensus 96 --~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH 141 (353)
T 3txo_A 96 --PDRLFFVMEFVNGGDLMFHIQKS----RRFDEARARFYAAEIISALMFLH 141 (353)
T ss_dssp --SSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999753 35899999999999999999998
No 205
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.40 E-value=5.2e-13 Score=137.62 Aligned_cols=96 Identities=28% Similarity=0.472 Sum_probs=84.4
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccCCCceE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~~~~~~ 763 (809)
.++|+..+.||+|+||+||+|+..++ . .||+| ++++||||+++++++.. ++..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~--~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 80 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNK-D--KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPI 80 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTT-E--EEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSSE
T ss_pred hhhceeeheecCCCccEEEEEEecCC-C--eEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCce
Confidence 45788999999999999999997643 3 69999 57899999999999765 6779
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 764 ALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 764 ~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++||||+++|+|.++++... ..+++.++..++.|+++||+|||
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH 123 (269)
T 4hcu_A 81 CLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLE 123 (269)
T ss_dssp EEEEECCTTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHhcC---cccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997543 45899999999999999999998
No 206
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.39 E-value=3.1e-13 Score=146.62 Aligned_cols=96 Identities=24% Similarity=0.355 Sum_probs=84.0
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe------------------------cCCCCcceeeEeeeeeccccC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
.++|+..++||+|+||+||+|+....+. .|||| +..+|||||++++++..
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~--~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~---- 124 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDR--IYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT---- 124 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTE--EEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC----
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCC--EEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE----
Confidence 4679999999999999999999776544 89999 12389999999999765
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++|+|.+++++. ..+++.++..|+.||+.||+|||
T Consensus 125 -~~~~~lV~E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH 170 (396)
T 4dc2_A 125 -ESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLH 170 (396)
T ss_dssp -SSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEEEcCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999753 35899999999999999999998
No 207
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.39 E-value=2e-13 Score=142.04 Aligned_cols=99 Identities=22% Similarity=0.267 Sum_probs=85.1
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
+.|...+.||+|+||+||+|+....+. .||+| +.++||||+++++++.. .+.
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 94 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGL--ERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-----YHN 94 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCC--EEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSE
T ss_pred hheeecceeccCCCeEEEEEEEccCCc--eEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-----CCe
Confidence 468899999999999999999765544 89999 57899999999999765 678
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++|||||++|+|.+++.........+++..+..|+.|+++||+|||
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH 141 (285)
T 3is5_A 95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141 (285)
T ss_dssp EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998643222356899999999999999999998
No 208
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.39 E-value=2.5e-13 Score=142.14 Aligned_cols=101 Identities=28% Similarity=0.496 Sum_probs=84.8
Q ss_pred cccccccceeccCCceeEEEEEEC--CCCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILN--HDDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|+..+.||+|+||+||+|++. +...++.|||| +.++||||+++++++... +.
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH---HH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CC
Confidence 356889999999999999999864 22345689999 578999999999998642 13
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
...++|||||++|+|.++++..+ ..+++.++..++.|+++||+|||
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH 131 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLG 131 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCG---GGCCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCCCHHHHHHhcc---cccCHHHHHHHHHHHHHHHHHHh
Confidence 45899999999999999997542 35899999999999999999998
No 209
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.39 E-value=4.3e-13 Score=142.07 Aligned_cols=100 Identities=24% Similarity=0.377 Sum_probs=85.2
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
+.|...+.||+|+||+||+|+....+. .|||| +.++|||||++++++.. .+...
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~ 83 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGD--LFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRH 83 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCC
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCc--EEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec---CCCce
Confidence 468899999999999999999765444 89999 46799999999998765 22447
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++|||||++|+|.++++... ....+++.++..|+.|+++||+|||
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH 129 (319)
T 4euu_A 84 KVLIMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLR 129 (319)
T ss_dssp EEEEEECCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998653 2234899999999999999999998
No 210
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.39 E-value=4.3e-13 Score=143.59 Aligned_cols=95 Identities=24% Similarity=0.304 Sum_probs=84.5
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
++|+..+.||+|+||+||+|+....+. .|||| +.++|||||++++++.. +
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~ 113 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGN--HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-----N 113 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCC--EEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----S
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCC--EEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-----C
Confidence 579999999999999999999765444 89999 47899999999999765 7
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..|+|||||++|+|.+++++. ..+++.++..++.||+.||+|||
T Consensus 114 ~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH 158 (350)
T 1rdq_E 114 SNLYMVMEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLH 158 (350)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999753 34899999999999999999998
No 211
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.39 E-value=5e-13 Score=141.91 Aligned_cols=95 Identities=21% Similarity=0.311 Sum_probs=83.7
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------------cCCCCcceeeEeeeeecccc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------------RSIRHRNLVKIITSCASVDF 757 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------------~~l~H~niv~l~~~~~~~~~ 757 (809)
+.|...+.||+|+||+||+|+....+. .|||| +.++|||||++++++..
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~--~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 85 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGL--QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN--- 85 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCC--EEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCc--EEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe---
Confidence 458899999999999999999765444 89998 35789999999999765
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+...++|||||++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 86 --~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH 131 (326)
T 2y0a_A 86 --KTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGVYYLH 131 (326)
T ss_dssp --SSEEEEEEECCCSCBHHHHHTTS----SCCBHHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEEEEcCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999743 45899999999999999999998
No 212
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.39 E-value=1.2e-13 Score=145.44 Aligned_cols=101 Identities=34% Similarity=0.475 Sum_probs=85.2
Q ss_pred HHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccc
Q 040849 699 LFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVD 756 (809)
Q Consensus 699 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~ 756 (809)
+....++|+..+.||+|+||+||+|+..+ . .|||| ++++|||||++++++..
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~~~--~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-- 105 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEWHG--S--DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ-- 105 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEETT--E--EEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEECC--C--cEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--
Confidence 33445679999999999999999998632 3 79999 46899999999999765
Q ss_pred cCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 757 FQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 757 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++|||||++|+|.++++... ....+++.++..++.|+++||+|||
T Consensus 106 ---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH 154 (309)
T 3p86_A 106 ---PPNLSIVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLH 154 (309)
T ss_dssp ---TTCCEEEEECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCceEEEEecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 677999999999999999998542 1224899999999999999999998
No 213
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.39 E-value=3.5e-13 Score=144.04 Aligned_cols=95 Identities=25% Similarity=0.359 Sum_probs=83.3
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCC-CCcceeeEeeeeeccccCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSI-RHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l-~H~niv~l~~~~~~~~~~~ 759 (809)
++|+..+.||+|+||+||+|+....+ +.|||| +.+ +|||||++++++..
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~----- 81 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTD--RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT----- 81 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----
T ss_pred hheEEEEEEEecCCeEEEEEEECCCC--CEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-----
Confidence 57899999999999999999976544 489999 233 89999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++|+|.+++++. ..+++.++..++.||+.||+|||
T Consensus 82 ~~~~~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH 127 (345)
T 3a8x_A 82 ESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLH 127 (345)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999743 35899999999999999999998
No 214
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.38 E-value=6e-13 Score=149.76 Aligned_cols=100 Identities=21% Similarity=0.284 Sum_probs=87.1
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|...++||+|+||+||+|+....+. .|||| +.++|||||++++++..
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~--~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~----- 256 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGK--LYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET----- 256 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCC--EEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCc--EEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-----
Confidence 3678899999999999999999765444 89999 46799999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..|+|||||++|+|.+++.........+++.++..|+.||+.||+|||
T Consensus 257 ~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH 306 (543)
T 3c4z_A 257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306 (543)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999865433456999999999999999999998
No 215
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.37 E-value=3.3e-13 Score=139.95 Aligned_cols=102 Identities=21% Similarity=0.289 Sum_probs=86.4
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|+..+.||+|+||.||+|+....+. .||+| +.++||||+++++++... ++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 79 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGK--ILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR---TN 79 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCC--EEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG---GG
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCc--EEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC---CC
Confidence 4679999999999999999999765444 89999 468999999999987541 25
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
...++||||+++|+|.+++.........+++.++..++.|+++||+|||
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 128 (279)
T 2w5a_A 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128 (279)
T ss_dssp TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 6799999999999999999754333455899999999999999999998
No 216
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.37 E-value=7e-13 Score=149.56 Aligned_cols=98 Identities=20% Similarity=0.302 Sum_probs=85.8
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|...+.||+|+||+||+|+....+. .|||| +.++|||||++++++..
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~--~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~----- 255 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGK--MYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET----- 255 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCC--EEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-----
Confidence 4679999999999999999999765444 89999 46799999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++|+|.++++..+ ...+++.++..|+.||+.||+|||
T Consensus 256 ~~~l~lVmEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH 303 (576)
T 2acx_A 256 KDALCLVLTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLH 303 (576)
T ss_dssp SSEEEEEECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 778999999999999999998643 245899999999999999999998
No 217
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.37 E-value=7.7e-13 Score=147.09 Aligned_cols=96 Identities=24% Similarity=0.409 Sum_probs=85.0
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|...+.||+|+||+||+|+....+. .|||| +.++|||||++++++..
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~--~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~----- 87 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGH--KVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST----- 87 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCC--EEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCC--EEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----
Confidence 3578999999999999999999765444 89999 47899999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..|+|||||++|+|.+++... ..+++.++..++.||+.||+|||
T Consensus 88 ~~~~~lv~E~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH 133 (476)
T 2y94_A 88 PSDIFMVMEYVSGGELFDYICKN----GRLDEKESRRLFQQILSGVDYCH 133 (476)
T ss_dssp SSEEEEEEECCSSEEHHHHTTSS----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999743 45899999999999999999998
No 218
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.37 E-value=6.9e-13 Score=141.57 Aligned_cols=98 Identities=37% Similarity=0.561 Sum_probs=83.3
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccCCCceE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~~~~~~ 763 (809)
.++|+..+.||+|+||+||+|+..+ +.|||| ..++||||+++++++......+....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~----~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSLDE----RPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETT----EEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEECC----eEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 4679999999999999999998632 389999 35899999999987655444556678
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 764 ALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 764 ~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++|||||++|+|.++++.+ ..+|.++..|+.||++||+|||
T Consensus 88 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~~L~~LH 128 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH-----TSDWVSSCRLAHSVTRGLAYLH 128 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCcHHHHHhhc-----ccchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999754 2589999999999999999998
No 219
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.37 E-value=6.7e-13 Score=144.82 Aligned_cols=98 Identities=24% Similarity=0.310 Sum_probs=86.0
Q ss_pred cccccccceeccC--CceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccC
Q 040849 703 TDGFSLENLIGAG--SFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 703 ~~~~~~~~~ig~G--~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
.++|+..+.||+| +||+||+|+....+. .|||| +.++|||||++++++..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---- 97 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGE--YVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA---- 97 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCC--EEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE----
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCC--EEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE----
Confidence 3579999999999 999999999765444 89999 46899999999999876
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++|+|.+++.... ...+++.++..|+.||++||+|||
T Consensus 98 -~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH 145 (389)
T 3gni_B 98 -DNELWVVTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIH 145 (389)
T ss_dssp -TTEEEEEEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 778999999999999999997542 245899999999999999999998
No 220
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.37 E-value=9.1e-13 Score=136.52 Aligned_cols=97 Identities=24% Similarity=0.448 Sum_probs=85.3
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|...+.||+|+||.||+|+....+. .|||| +.++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 82 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGL--EVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED----- 82 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-----
T ss_pred cccceeeeeecCCCceEEEEEEEccCCc--eEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-----
Confidence 4579999999999999999999755444 89999 46799999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..++||||+++|+|.+++..+. ..+++.++..++.|+++||+|||
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH 129 (278)
T 3cok_A 83 SNYVYLVLEMCHNGEMNRYLKNRV---KPFSENEARHFMHQIITGMLYLH 129 (278)
T ss_dssp SSEEEEEEECCTTEEHHHHHHTCS---SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999998542 45899999999999999999998
No 221
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.37 E-value=3.9e-13 Score=140.16 Aligned_cols=99 Identities=29% Similarity=0.521 Sum_probs=84.6
Q ss_pred cccccccceeccCCceeEEEEEECCCCc-----eeEEEEe--------------------cCCCCcceeeEeeeeecccc
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDH-----ETLVAVK--------------------RSIRHRNLVKIITSCASVDF 757 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~-----~~~vavK--------------------~~l~H~niv~l~~~~~~~~~ 757 (809)
.++|...+.||+|+||+||+|+....+. ++.||+| +.++|||||++++++..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC--- 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC---
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe---
Confidence 3578899999999999999998664331 2479999 57899999999999765
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++|||||++|+|.++++..+ ..+++.++..++.|+++||+|||
T Consensus 84 --~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH 130 (289)
T 4fvq_A 84 --GDENILVQEFVKFGSLDTYLKKNK---NCINILWKLEVAKQLAAAMHFLE 130 (289)
T ss_dssp --TTCCEEEEECCTTCBHHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCEEEEECCCCCCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHh
Confidence 677899999999999999998542 34899999999999999999998
No 222
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.37 E-value=1e-12 Score=139.77 Aligned_cols=101 Identities=27% Similarity=0.521 Sum_probs=85.9
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCC-CCcceeeEeeeeeccccCCCc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSI-RHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l-~H~niv~l~~~~~~~~~~~~~ 761 (809)
++|...+.||+|+||.||+|+....+....|||| +++ +||||+++++++.. ++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-----~~ 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-----RG 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-----TT
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee-----CC
Confidence 5688999999999999999997665443345888 466 89999999999865 77
Q ss_pred eEEEEEeccCCCChhhhhcCCC------------CCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKP------------EAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~------------~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++||||+++|+|.++++..+ .....+++.+++.++.|+++||+|||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 159 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 159 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999998653 12346899999999999999999998
No 223
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.37 E-value=3.7e-13 Score=139.84 Aligned_cols=101 Identities=26% Similarity=0.405 Sum_probs=83.7
Q ss_pred HHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccC
Q 040849 698 NLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 698 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
.+....++|+..+.||+|+||+||+|....+ +.|||| +.++||||+++++++..
T Consensus 18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 90 (283)
T 3gen_A 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQ---YDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK---- 90 (283)
T ss_dssp TTBCCGGGEEEEEECC---CEEEEEEEETTT---EEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECS----
T ss_pred CccCCHHHHHhHhhcCCCCCceEEEEEEcCC---CeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEec----
Confidence 3334556899999999999999999987643 379999 57899999999999765
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.++++... ..+++.++..++.|+++||+|||
T Consensus 91 -~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH 137 (283)
T 3gen_A 91 -QRPIFIITEYMANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLE 137 (283)
T ss_dssp -SSSEEEEECCCTTCBHHHHHHCGG---GCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCeEEEEeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH
Confidence 677999999999999999998532 45899999999999999999998
No 224
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.37 E-value=2.5e-13 Score=143.26 Aligned_cols=95 Identities=25% Similarity=0.248 Sum_probs=82.4
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
++|+..+.||+|+||+||+|+....+. .|||| +..+|||||+++++|.. +
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-----~ 129 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGR--LYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-----G 129 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSC--EEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----T
T ss_pred hheeeeheeccCCCeEEEEEEECCCCe--EEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-----C
Confidence 469999999999999999999775544 89999 22389999999999876 7
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++||||| +|+|.+++...+ ..++|.++..|+.|++.||+|||
T Consensus 130 ~~~~lv~e~~-~~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH 174 (311)
T 3p1a_A 130 GILYLQTELC-GPSLQQHCEAWG---ASLPEAQVWGYLRDTLLALAHLH 174 (311)
T ss_dssp TEEEEEEECC-CCBHHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999999 779999887542 45999999999999999999998
No 225
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.37 E-value=2.2e-13 Score=141.97 Aligned_cols=103 Identities=27% Similarity=0.515 Sum_probs=88.4
Q ss_pred HHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccC
Q 040849 698 NLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 698 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
++....++|+..+.||+|+||+||+|+....+ +.|||| +.++||||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 80 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---- 80 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGT--EEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCC--EEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc----
Confidence 34445678999999999999999999976543 489999 57899999999999765
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.++++... ...+++..+..++.|+++||+|||
T Consensus 81 -~~~~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH 128 (288)
T 3kfa_A 81 -EPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE 128 (288)
T ss_dssp -SSSEEEEEECCTTEEHHHHHHHCC--TTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEEEcCCCCcHHHHHHhcc--cCCccHhHHHHHHHHHHHHHHHHH
Confidence 677999999999999999997542 345899999999999999999998
No 226
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.36 E-value=6.5e-13 Score=147.61 Aligned_cols=96 Identities=28% Similarity=0.341 Sum_probs=84.9
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|+..+.||+|+||+||+|.....+. .|||| +.++|||||++++++..
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~----- 219 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGR--YYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT----- 219 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-----
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCC--EEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-----
Confidence 4679999999999999999999765444 89999 46789999999999876
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++|||||++|+|.+++... ..+++.++..|+.||++||+|||
T Consensus 220 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH 265 (446)
T 4ejn_A 220 HDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALDYLH 265 (446)
T ss_dssp TTEEEEEECCCSSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHh
Confidence 67899999999999999999743 35899999999999999999998
No 227
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.36 E-value=5.6e-13 Score=142.74 Aligned_cols=97 Identities=22% Similarity=0.256 Sum_probs=84.0
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCC-CCcceeeEeeeeecccc
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSI-RHRNLVKIITSCASVDF 757 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l-~H~niv~l~~~~~~~~~ 757 (809)
..++|+..+.||+|+||+||+|+... +++.|||| +.+ +||+|+++++++..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~--~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~--- 92 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKG--TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT--- 92 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETT--EEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC---
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECC--CCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc---
Confidence 34689999999999999999999654 45689999 233 89999999999664
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..|+|||||++|+|.++++.. ..+++.++..++.||+.||+|||
T Consensus 93 --~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH 138 (353)
T 2i0e_A 93 --MDRLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQ 138 (353)
T ss_dssp --SSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999743 35899999999999999999998
No 228
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.36 E-value=6.3e-13 Score=141.05 Aligned_cols=90 Identities=26% Similarity=0.337 Sum_probs=79.0
Q ss_pred cceeccCCceeEEEEEECCCCceeEEEEe-----------------cCCC-CcceeeEeeeeeccccCCCceEEEEEecc
Q 040849 709 ENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------RSIR-HRNLVKIITSCASVDFQGNDFKALVYEFM 770 (809)
Q Consensus 709 ~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------~~l~-H~niv~l~~~~~~~~~~~~~~~~lv~Ey~ 770 (809)
.+.||+|+||+||+|.....+. .|||| +.++ |||||++++++.. +...|+|||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-----~~~~~lv~e~~ 88 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQ--AFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHD-----QLHTFLVMELL 88 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCC--EEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----SSEEEEEECCC
T ss_pred CCccccCCCeEEEEEEECCCCC--EEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-----CCEEEEEEEcc
Confidence 4789999999999999765544 89999 3454 9999999999765 77899999999
Q ss_pred CCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 771 VNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 771 ~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++|+|.++++.. ..+++.++..|+.|+++||+|||
T Consensus 89 ~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH 123 (325)
T 3kn6_A 89 NGGELFERIKKK----KHFSETEASYIMRKLVSAVSHMH 123 (325)
T ss_dssp CSCBHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999754 45899999999999999999998
No 229
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.36 E-value=7.5e-13 Score=137.23 Aligned_cols=96 Identities=22% Similarity=0.386 Sum_probs=85.1
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|+..+.||+|+||+||+|+....+. .|||| +.++||||+++++++..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 80 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKF--ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD----- 80 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCc--EEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-----
Confidence 4679999999999999999999766544 89999 56899999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..++||||+++|+|.+++... ..+++.++..++.|++.||+|||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH 126 (279)
T 3fdn_A 81 ATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCH 126 (279)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999743 34899999999999999999998
No 230
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.36 E-value=7.5e-13 Score=144.63 Aligned_cols=100 Identities=24% Similarity=0.377 Sum_probs=85.1
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
+.|...+.||+|+||+||+|+....+. .|||| +.++|||||++++++... +...
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~---~~~~ 83 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGD--LFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET---TTRH 83 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT---TTCC
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCc--EEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccC---CCCe
Confidence 468899999999999999999765444 89999 468999999999997652 2447
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++|||||++|+|.++++... ....+++.++..++.|++.||+|||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH 129 (396)
T 4eut_A 84 KVLIMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLR 129 (396)
T ss_dssp EEEEECCCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998643 2234899999999999999999998
No 231
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.36 E-value=4.5e-13 Score=148.91 Aligned_cols=101 Identities=30% Similarity=0.404 Sum_probs=85.7
Q ss_pred HHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 699 LFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 699 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
+....++|+..+.||+|+||+||+|++.+ . .|||| ++++|||||+++++|.. ++
T Consensus 188 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~--~--~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~ 259 (450)
T 1k9a_A 188 WALNMKELKLLQTIGKGEFGDVMLGDYRG--N--KVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EK 259 (450)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEETT--E--EEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEEC----TT
T ss_pred cccChHHeEEEeeecCcCCeeEEEEEecC--C--eEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEc----CC
Confidence 33455778999999999999999999752 3 89999 57899999999999765 23
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
...|+|||||++|+|.++++.++ ...+++.++..++.|||+||+|||
T Consensus 260 ~~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH 306 (450)
T 1k9a_A 260 GGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE 306 (450)
T ss_dssp SCEEEEEECCTTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999998542 234789999999999999999998
No 232
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.35 E-value=1.2e-12 Score=144.01 Aligned_cols=96 Identities=20% Similarity=0.271 Sum_probs=83.3
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------------cCCCCcceeeEeeeee
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------------RSIRHRNLVKIITSCA 753 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------------~~l~H~niv~l~~~~~ 753 (809)
..++|...+.||+|+||+||+|.....+. .|||| ++++|||||++++++.
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCK--KVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCC--EEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCc--EEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 35679999999999999999999766544 89998 3578999999999864
Q ss_pred ccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 754 SVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 754 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..|+|||||++|+|.+++... ..+++.++..|+.|+++||+|||
T Consensus 211 ------~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH 256 (419)
T 3i6u_A 211 ------AEDYYIVLELMEGGELFDKVVGN----KRLKEATCKLYFYQMLLAVQYLH 256 (419)
T ss_dssp ------SSEEEEEEECCTTCBGGGGTSSS----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ------cCceEEEEEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 34589999999999999998753 45899999999999999999998
No 233
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.35 E-value=6.8e-13 Score=146.51 Aligned_cols=96 Identities=19% Similarity=0.271 Sum_probs=82.7
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|+..+.||+|+||+||+|.....+ +.||+| +.++|||||++++++.. +
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~--~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----~ 82 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAG--QEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-----E 82 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTT--EEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-----S
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCC--cEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-----C
Confidence 457999999999999999999966544 489998 46899999999999765 7
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..|+|||||++|+|.+++..+ ..+++.++..++.||++||+|||
T Consensus 83 ~~~~lv~E~~~gg~L~~~i~~~----~~~~e~~~~~i~~qil~aL~~lH 127 (444)
T 3soa_A 83 GHHYLIFDLVTGGELFEDIVAR----EYYSEADASHCIQQILEAVLHCH 127 (444)
T ss_dssp SEEEEEECCCBCCBHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEeCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999754 35899999999999999999998
No 234
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.35 E-value=4.9e-13 Score=141.05 Aligned_cols=100 Identities=20% Similarity=0.338 Sum_probs=83.6
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|+..+.||+|+||+||+|+....+ +.|||| +.++|||||++++++.... ..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 87 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDH--RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PA 87 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TT
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCC--ceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CC
Confidence 357999999999999999999965543 489999 4678999999999976521 11
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+...|+|||||++|+|.++++.. ..+++.++..++.|+++||+|||
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH 133 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH 133 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcccEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 23459999999999999999743 35899999999999999999998
No 235
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.35 E-value=8.6e-13 Score=139.33 Aligned_cols=103 Identities=26% Similarity=0.448 Sum_probs=85.7
Q ss_pred hcccccccceeccCCceeEEEEEECC---CCceeEEEEe---------------------cCCCCcceeeEeeeeecccc
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVK---------------------RSIRHRNLVKIITSCASVDF 757 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~ 757 (809)
..++|...+.||+|+||.||+|+... ...++.|||| +.++|||||++++++..
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 97 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ--- 97 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec---
Confidence 35678999999999999999998632 2234689999 57899999999999765
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCC--------------------CCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPE--------------------APRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~--------------------~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.++++..+. ....+++.++..++.|+++||+|||
T Consensus 98 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH 167 (314)
T 2ivs_A 98 --DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167 (314)
T ss_dssp --SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH
T ss_pred --CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH
Confidence 6779999999999999999985432 1234889999999999999999998
No 236
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.35 E-value=7.6e-13 Score=141.79 Aligned_cols=106 Identities=24% Similarity=0.420 Sum_probs=86.6
Q ss_pred HHHhcccccccceeccCCceeEEEEEECC---CCceeEEEEe---------------------cCC-CCcceeeEeeeee
Q 040849 699 LFKATDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVK---------------------RSI-RHRNLVKIITSCA 753 (809)
Q Consensus 699 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~~~vavK---------------------~~l-~H~niv~l~~~~~ 753 (809)
+....++|...+.||+|+||+||+|+... .+.++.|||| +.+ +||||+++++++.
T Consensus 40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 34456789999999999999999999632 2345689999 345 8999999999976
Q ss_pred ccccCCCceEEEEEeccCCCChhhhhcCCCCC-------------------CCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 754 SVDFQGNDFKALVYEFMVNGSLEEWLHPKPEA-------------------PRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 754 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~-------------------~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
. ++..++|||||++|+|.+++...+.. ...+++.++..++.|+++||+|||
T Consensus 120 ~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 189 (344)
T 1rjb_A 120 L-----SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE 189 (344)
T ss_dssp S-----SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred e-----CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 5 67799999999999999999865321 134799999999999999999998
No 237
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.35 E-value=1.2e-12 Score=141.42 Aligned_cols=98 Identities=23% Similarity=0.510 Sum_probs=82.5
Q ss_pred cccccceeccCCceeEEEEEECCC-CceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 705 GFSLENLIGAGSFGSVYKGILNHD-DHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 705 ~~~~~~~ig~G~~g~Vy~~~~~~~-~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
.|...+.||+|+||+||+|+..+. +....|||| ++++|||||+++++|.. +++.
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~----~~~~ 165 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SEGS 165 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECC----CSSC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEc----CCCC
Confidence 466778999999999999997533 344578999 56899999999998754 2457
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++|||||++|+|.++++... ..+++.++..++.||++||+|||
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH 209 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKFLA 209 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998542 45889999999999999999998
No 238
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.35 E-value=4.9e-13 Score=144.49 Aligned_cols=104 Identities=15% Similarity=0.231 Sum_probs=83.7
Q ss_pred HhcccccccceeccCCceeEEEEEECC---CCceeEEEEe-----------------cCCC---CcceeeEeeeeecccc
Q 040849 701 KATDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVK-----------------RSIR---HRNLVKIITSCASVDF 757 (809)
Q Consensus 701 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~~~vavK-----------------~~l~---H~niv~l~~~~~~~~~ 757 (809)
...++|...+.||+|+||+||+|+..+ ...++.|||| +.++ |+||+++++++..
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~--- 138 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF--- 138 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC---
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeec---
Confidence 345679999999999999999995321 2234489999 2344 9999999999875
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCC-CCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPE-APRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~-~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++|+|.++++..+. ....++|.++..|+.||++||+|||
T Consensus 139 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH 189 (365)
T 3e7e_A 139 --QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH 189 (365)
T ss_dssp --SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh
Confidence 6788999999999999999974221 2356999999999999999999998
No 239
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.35 E-value=7e-13 Score=140.27 Aligned_cols=104 Identities=20% Similarity=0.267 Sum_probs=84.9
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
.++|+..+.||+|+||.||+|+....+. .|||| +.++||||+++++++... ......
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGH--FYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE-RGAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCC--EEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE-ETTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCc--EEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec-cCCCce
Confidence 4579999999999999999999755444 89999 578999999999998631 112457
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++||||+++|+|.+++.........+++.++..++.|+++||+|||
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH 151 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH 151 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999753323456999999999999999999998
No 240
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.35 E-value=8.1e-13 Score=144.32 Aligned_cols=101 Identities=20% Similarity=0.359 Sum_probs=82.4
Q ss_pred cccccc-ceeccCCceeEEEEEECCCCceeEEEEe----------------cCCCCcceeeEeeeeeccccCCCceEEEE
Q 040849 704 DGFSLE-NLIGAGSFGSVYKGILNHDDHETLVAVK----------------RSIRHRNLVKIITSCASVDFQGNDFKALV 766 (809)
Q Consensus 704 ~~~~~~-~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------~~l~H~niv~l~~~~~~~~~~~~~~~~lv 766 (809)
++|... ++||+|+||+||+|.....+. .|||| +..+|||||++++++... +.++...|+|
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~--~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~~~lv 137 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQE--KFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKCLLIV 137 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCC--EEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcEEEEE
Confidence 456665 689999999999999765444 89999 346899999999987541 2335678999
Q ss_pred EeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 767 YEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 767 ~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
||||++|+|.++++.+. ...+++.++..|+.||++||+|||
T Consensus 138 ~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH 178 (400)
T 1nxk_A 138 MECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLH 178 (400)
T ss_dssp EECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998653 245899999999999999999998
No 241
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.35 E-value=9e-13 Score=136.49 Aligned_cols=95 Identities=32% Similarity=0.385 Sum_probs=84.0
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCCceE
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~~~~ 763 (809)
+.|+..+.||+|+||+||+|+....+. .||+| +.++||||+++++++.. ++..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 81 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRI--RRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED-----NTDI 81 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSEE
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCc--EEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCeE
Confidence 468899999999999999999766544 88998 57899999999999765 7789
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 764 ALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 764 ~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++||||+++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 82 ~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH 123 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHK----RVFRESDAARIMKDVLSAVAYCH 123 (277)
T ss_dssp EEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998743 34899999999999999999998
No 242
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.35 E-value=5.2e-13 Score=138.64 Aligned_cols=99 Identities=27% Similarity=0.438 Sum_probs=83.9
Q ss_pred hcccccccceeccCCceeEEEEEECCCC-ceeEEEEe---------------------cCCCCcceeeEeeeeeccccCC
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDD-HETLVAVK---------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~-~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
..++|+..+.||+|+||+||+|...... .+..||+| +.++||||+++++++.
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 86 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 86 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------
Confidence 3467899999999999999999976432 34579999 4689999999999863
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.++++.++ ..+++.++..++.|+++||+|||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH 133 (281)
T 1mp8_A 87 ENPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLE 133 (281)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred cCccEEEEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 456899999999999999997542 45899999999999999999998
No 243
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.35 E-value=7.3e-13 Score=144.10 Aligned_cols=106 Identities=19% Similarity=0.308 Sum_probs=82.2
Q ss_pred HhcccccccceeccCCceeEEEEEECCCCceeEEEEe----------------cCCCCcceeeEeeeeecccc-------
Q 040849 701 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------RSIRHRNLVKIITSCASVDF------- 757 (809)
Q Consensus 701 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------~~l~H~niv~l~~~~~~~~~------- 757 (809)
...++|...+.||+|+||+||+|+....+. .|||| +.++|||||++++++.....
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~--~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGK--RFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCC--EEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCC--EEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence 445789999999999999999999765444 89999 57899999999999854211
Q ss_pred --------------------------CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 --------------------------QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 --------------------------~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+....++|||||+ |+|.+.++........+++..+..|+.|+++||+|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23455899999998 5887777632222356999999999999999999998
No 244
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.35 E-value=1.5e-12 Score=150.00 Aligned_cols=96 Identities=24% Similarity=0.441 Sum_probs=81.8
Q ss_pred cccccc-eeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 705 GFSLEN-LIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 705 ~~~~~~-~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
++...+ .||+|+||+||+|.+.....+..|||| +.++|||||+++++|.. +.
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~ 409 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EA 409 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SS
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CC
Confidence 344444 799999999999998755556689999 57899999999999753 45
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++|||||++|+|.++++.+ ...+++.++..|+.|||+||+|||
T Consensus 410 ~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH 453 (613)
T 2ozo_A 410 LMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLE 453 (613)
T ss_dssp EEEEEECCTTCBHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999754 245899999999999999999998
No 245
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.35 E-value=8.3e-13 Score=136.23 Aligned_cols=93 Identities=31% Similarity=0.496 Sum_probs=80.2
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe------------------------cCCCCcceeeEeeeeeccccC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
.++|+..+.||+|+||.||+|+..+ . .|||| +.++||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~~--~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 77 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWIG--D--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK---- 77 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEETT--E--EEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC----
T ss_pred hhheeeeeeeccCCCeEEEEEEEcC--C--eEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec----
Confidence 3578899999999999999999642 3 79998 35799999999999765
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.++++. ..+++.++..++.|+++||+|||
T Consensus 78 -~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH 122 (271)
T 3dtc_A 78 -EPNLCLVMEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGMNYLH 122 (271)
T ss_dssp -C--CEEEEECCTTEEHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCceEEEEEcCCCCCHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 6779999999999999999963 34899999999999999999998
No 246
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.35 E-value=7.1e-13 Score=142.18 Aligned_cols=109 Identities=22% Similarity=0.220 Sum_probs=86.8
Q ss_pred CcccccccCCCCCcEEEEECCCCCCccccCccccCCCCccEEeCCC-CCCCccCCccccccccCCccccCCCcCcccCCc
Q 040849 63 CQWKGVTCSPRHQRVTALLLPSLLLQGSLSPHIGNLSFLRVLDLKN-NSFRNEIPQEIGYLFRLQFLWLDNNTFGGQIPD 141 (809)
Q Consensus 63 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~LdLs~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 141 (809)
|.|.+|.|+.. +.+++ +|. +..+++|++|+|++ |.|++..|..|+++++|++|+|++|+|++..|.
T Consensus 8 C~~~~v~~~~~-----------n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCTRD-----------GALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECCSS-----------CCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcCCC-----------CCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 78877777532 14543 677 88889999999986 899888888888888999999999988888888
Q ss_pred cccCCCcCcEEEcccCCCCCCCcccccCCCCCCEEEcccccCcc
Q 040849 142 NISHCVNLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNNLSG 185 (809)
Q Consensus 142 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 185 (809)
.|.++++|++|+|++|+|++..+..|..++ |++|+|.+|.+..
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 888888888888888888876666666665 8888888887763
No 247
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.35 E-value=6.5e-13 Score=136.79 Aligned_cols=96 Identities=28% Similarity=0.424 Sum_probs=83.9
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccCCCceE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~~~~~~ 763 (809)
.++|+..+.||+|+||+||+|+..++ . .|||| +.++||||+++++++.. ++..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~--~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 78 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQ-Y--DVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK-----EYPI 78 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTT-E--EEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECS-----SSSE
T ss_pred hhheeeeeeeccCCCceEEEEEecCc-e--eEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCce
Confidence 46789999999999999999987643 3 69999 46899999999999764 6779
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 764 ALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 764 ~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++||||+++|+|.++++.. ...+++.++..++.|+++||+|||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH 121 (268)
T 3sxs_A 79 YIVTEYISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLE 121 (268)
T ss_dssp EEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999753 235899999999999999999998
No 248
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.34 E-value=3.8e-13 Score=149.74 Aligned_cols=102 Identities=25% Similarity=0.472 Sum_probs=86.5
Q ss_pred HHHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeecccc
Q 040849 697 QNLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDF 757 (809)
Q Consensus 697 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~ 757 (809)
+++....++|...+.||+|+||+||+|.+..+ . .|||| +.++|||||++++++.
T Consensus 181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~-~--~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~---- 253 (454)
T 1qcf_A 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKH-T--KVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT---- 253 (454)
T ss_dssp TCSBCCGGGEEEEEEEECCSSEEEEEEEETTT-E--EEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC----
T ss_pred cceeechHHeEEEEEcccCCceEEEEEEECCc-c--EEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe----
Confidence 34455667899999999999999999997643 3 79999 5789999999999874
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..++|||||++|+|.++++..+ ...+++.++..|+.|||+||+|||
T Consensus 254 --~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH 301 (454)
T 1qcf_A 254 --KEPIYIITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIE 301 (454)
T ss_dssp --SSSCEEEECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCccEEEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 456899999999999999998542 234789999999999999999998
No 249
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.34 E-value=9e-13 Score=140.12 Aligned_cols=95 Identities=21% Similarity=0.376 Sum_probs=83.3
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|...+.||+|+||+||+|+....+. .|||| +.++|||||++++++..
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----- 80 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQ--KVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT----- 80 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-----
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCC--EEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----
Confidence 3579999999999999999999765544 89999 56899999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+ +|+|.+++..+ ..+++.++..++.|+++||+|||
T Consensus 81 ~~~~~lv~E~~-~g~l~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH 125 (336)
T 3h4j_B 81 PTDIVMVIEYA-GGELFDYIVEK----KRMTEDEGRRFFQQIICAIEYCH 125 (336)
T ss_dssp SSEEEEEECCC-CEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEECC-CCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999 78999998743 35899999999999999999998
No 250
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=3.7e-14 Score=152.70 Aligned_cols=64 Identities=20% Similarity=0.188 Sum_probs=26.9
Q ss_pred CCCCCEEEccccccccc----cCccccCCCCCCEEeCcCCccccc----cchhhcCCCCCCEEeCCCCCccc
Q 040849 514 LKNLGVLDVSENKLSGE----IPNSLGSCVRLEQLGMNGNFFQGN----IPSSFSSLRGIENLDLSRNNLSG 577 (809)
Q Consensus 514 l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~LdLs~N~l~~ 577 (809)
.++|++|||++|.|+.. ++..+...++|++|+|++|.|++. ++..+...++|++|||++|.|+.
T Consensus 182 ~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 182 NTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp CSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 34444444444444322 123333444444444444444432 22223333444444444444443
No 251
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.34 E-value=8.6e-13 Score=142.66 Aligned_cols=94 Identities=22% Similarity=0.343 Sum_probs=76.2
Q ss_pred ccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCCceEEE
Q 040849 706 FSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGNDFKAL 765 (809)
Q Consensus 706 ~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~~~~~l 765 (809)
+...+.||+|+||+||+|+....+. .||+| +.++|||||++++++.. .+..++
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~--~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-----~~~~~l 163 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGL--KLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES-----KNDIVL 163 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCC--EEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSEEEE
T ss_pred eecceEEecCcCEEEEEEEEcCCCc--EEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-----CCEEEE
Confidence 3446789999999999999765444 89999 57899999999999765 678999
Q ss_pred EEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 766 VYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 766 v~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
|||||++|+|.+++... ...+++.++..++.||++||+|||
T Consensus 164 v~E~~~~~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH 204 (373)
T 2x4f_A 164 VMEYVDGGELFDRIIDE---SYNLTELDTILFMKQICEGIRHMH 204 (373)
T ss_dssp EEECCTTCEEHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998743 245899999999999999999998
No 252
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.34 E-value=1.1e-12 Score=138.31 Aligned_cols=100 Identities=26% Similarity=0.351 Sum_probs=84.1
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|...+.||+|+||.||+|.....+. .|||| +.++||||+++++++..
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 103 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGV--PVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE----- 103 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCC--EEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCc--eEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----
Confidence 4579999999999999999999765444 89999 46899999999999876
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.+++.........+++.++..++.|+++||+|||
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (310)
T 2wqm_A 104 DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153 (310)
T ss_dssp TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh
Confidence 67899999999999999998743222356899999999999999999998
No 253
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.34 E-value=8.9e-13 Score=137.49 Aligned_cols=99 Identities=22% Similarity=0.199 Sum_probs=83.5
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|+..+.||+|+||+||+|+....+ +.|||| +.++||||+++++++.. +
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-----~ 78 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSG--QIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-----E 78 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----S
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCC--eEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-----c
Confidence 467999999999999999999975544 489999 46799999999999765 6
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++|||||+ |+|.++++........+++.++..|+.|+++||+|||
T Consensus 79 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH 126 (290)
T 3fme_A 79 GDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 126 (290)
T ss_dssp SSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 77999999997 5888877642222356999999999999999999998
No 254
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.34 E-value=1.7e-12 Score=135.21 Aligned_cols=97 Identities=25% Similarity=0.447 Sum_probs=81.0
Q ss_pred ccccccc-eeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 704 DGFSLEN-LIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 704 ~~~~~~~-~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
++|...+ .||+|+||.||+|+......++.|||| +.++||||+++++++. .+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~ 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------AE 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------SS
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec------CC
Confidence 4566665 999999999999997654455689999 4689999999999974 45
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++||||+++|+|.+++... ...+++.++..++.|+++||+|||
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH 127 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLE 127 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999754 245899999999999999999998
No 255
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.34 E-value=1.3e-12 Score=136.68 Aligned_cols=96 Identities=21% Similarity=0.270 Sum_probs=84.4
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|...+.||+|+||+||+|+....+. .||+| +.++||||+++++++..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----- 86 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKE--VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED----- 86 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCc--eEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-----
Confidence 3568899999999999999999765544 89998 47899999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH 132 (294)
T 2rku_A 87 NDFVFVVLELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLH 132 (294)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999998743 35899999999999999999998
No 256
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.34 E-value=1.5e-12 Score=134.59 Aligned_cols=95 Identities=22% Similarity=0.384 Sum_probs=84.2
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
++|+..+.||+|+||.||+|+....+. .|||| +.++||||+++++++.. ++.
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 79 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEE--AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-----GNI 79 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCC--EEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTE
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCc--EEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-----CCE
Confidence 568999999999999999999765444 89999 46899999999999765 678
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++||||+++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH 122 (276)
T 2yex_A 80 QYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLH 122 (276)
T ss_dssp EEEEEECCTTEEGGGGSBTT----TBCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999743 45899999999999999999998
No 257
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.33 E-value=1.2e-12 Score=147.41 Aligned_cols=95 Identities=22% Similarity=0.265 Sum_probs=80.9
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
+.|...+.||+|+||+||+|+....+. .|||| +.++|||||++++++.. ..
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~ 109 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHV--ERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-----KR 109 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCC--EEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCc--EEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----CC
Confidence 458899999999999999999765444 89999 57899999999999765 77
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..|+|||||++|+|.+++..+ ..+++.++..|+.||++||+|||
T Consensus 110 ~~~lv~e~~~~g~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH 153 (494)
T 3lij_A 110 NYYLVMECYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSGVTYLH 153 (494)
T ss_dssp EEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999988743 35899999999999999999998
No 258
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.33 E-value=1.4e-12 Score=141.84 Aligned_cols=103 Identities=26% Similarity=0.451 Sum_probs=85.3
Q ss_pred hcccccccceeccCCceeEEEEEECCC-----CceeEEEEe---------------------cCC-CCcceeeEeeeeec
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHD-----DHETLVAVK---------------------RSI-RHRNLVKIITSCAS 754 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~~~~vavK---------------------~~l-~H~niv~l~~~~~~ 754 (809)
..++|...+.||+|+||+||+|+.... ..++.|||| +.+ +|||||++++++..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 346788999999999999999996421 234579999 234 89999999999765
Q ss_pred cccCCCceEEEEEeccCCCChhhhhcCCCC------------CCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 755 VDFQGNDFKALVYEFMVNGSLEEWLHPKPE------------APRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 755 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++|||||++|+|.++++.++. ....+++.++..|+.|+++||+|||
T Consensus 147 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 208 (382)
T 3tt0_A 147 -----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA 208 (382)
T ss_dssp -----SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 6779999999999999999985431 1245899999999999999999998
No 259
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.33 E-value=1.5e-12 Score=138.83 Aligned_cols=103 Identities=23% Similarity=0.459 Sum_probs=83.9
Q ss_pred hcccccccceeccCCceeEEEEEECCC-----CceeEEEEe---------------------cCC-CCcceeeEeeeeec
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHD-----DHETLVAVK---------------------RSI-RHRNLVKIITSCAS 754 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~~~~vavK---------------------~~l-~H~niv~l~~~~~~ 754 (809)
..++|...+.||+|+||+||+|+.... ..++.|||| +.+ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 356799999999999999999997521 234579999 234 89999999999765
Q ss_pred cccCCCceEEEEEeccCCCChhhhhcCCCCC------------CCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 755 VDFQGNDFKALVYEFMVNGSLEEWLHPKPEA------------PRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 755 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~------------~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.++++..+.. ...+++.++..++.|+++||+|||
T Consensus 113 -----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 174 (334)
T 2pvf_A 113 -----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA 174 (334)
T ss_dssp -----SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999865321 234899999999999999999998
No 260
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.33 E-value=9.6e-13 Score=139.80 Aligned_cols=98 Identities=20% Similarity=0.296 Sum_probs=83.9
Q ss_pred cccccccceeccCCceeEEEEEECC-CCceeEEEEe------------------------cCCCCcceeeEeeeeecccc
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNH-DDHETLVAVK------------------------RSIRHRNLVKIITSCASVDF 757 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~~~~vavK------------------------~~l~H~niv~l~~~~~~~~~ 757 (809)
.++|+..+.||+|+||+||+|+... ...++.||+| +.++|||||++++++..
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 92 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT--- 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC---
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc---
Confidence 4679999999999999999998742 1234589999 35789999999999765
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++|+|.+++... ..+++.++..++.||+.||+|||
T Consensus 93 --~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH 138 (327)
T 3a62_A 93 --GGKLYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEISMALGHLH 138 (327)
T ss_dssp --SSCEEEEEECCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEEEeCCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999743 35889999999999999999998
No 261
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.33 E-value=1.5e-12 Score=140.39 Aligned_cols=96 Identities=23% Similarity=0.249 Sum_probs=84.9
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
.++|+..+.||+|+||+||+|+....+. .||+| +.++||||+++++++.. ++
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 104 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGL--VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DG 104 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCC--EEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-----TT
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCc--EEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-----CC
Confidence 3579999999999999999999765444 89999 56899999999999876 67
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++|||||++|+|.++++.. ..+++..+..++.|+++||+|||
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lh 148 (360)
T 3eqc_A 105 EISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLR 148 (360)
T ss_dssp EEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999753 34899999999999999999998
No 262
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.33 E-value=2e-12 Score=134.85 Aligned_cols=98 Identities=29% Similarity=0.427 Sum_probs=83.3
Q ss_pred cccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 705 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 705 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
.|...+.||+|+||+||+|.....+. .||+| +.++|||||++++++... ..++..
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~--~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~~ 103 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTV--EVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKC 103 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE-SSSCEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCce--EEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc-cCCCce
Confidence 47778899999999999999765544 89988 578999999999987642 233567
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++||||+++|+|.++++.. ..+++..+..++.|+++||+|||
T Consensus 104 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH 146 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLH 146 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999743 35899999999999999999998
No 263
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.33 E-value=1e-12 Score=138.32 Aligned_cols=94 Identities=29% Similarity=0.465 Sum_probs=80.3
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe------------------cCCCCcceeeEeeeeeccccCCCceEEE
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------RSIRHRNLVKIITSCASVDFQGNDFKAL 765 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------~~l~H~niv~l~~~~~~~~~~~~~~~~l 765 (809)
++|+..+.||+|+||+||+|+... . .|||| ++++|||||++++++. +..++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~~--~--~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~l 76 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWRA--K--DVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-------NPVCL 76 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEETT--E--EEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCT-------TTTEE
T ss_pred hHeeeeeEeecCCCceEEEEEECC--e--eEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCcEE
Confidence 468889999999999999999653 3 79999 5689999999999864 24799
Q ss_pred EEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 766 VYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 766 v~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
||||+++|+|.++++... ....+++.++..++.|+++||+|||
T Consensus 77 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH 119 (307)
T 2eva_A 77 VMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLH 119 (307)
T ss_dssp EEECCTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998653 2234789999999999999999998
No 264
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.33 E-value=1.4e-12 Score=138.28 Aligned_cols=95 Identities=22% Similarity=0.335 Sum_probs=83.8
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------------cCCCCcceeeEeeeeecccc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------------RSIRHRNLVKIITSCASVDF 757 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------------~~l~H~niv~l~~~~~~~~~ 757 (809)
+.|+..+.||+|+||.||+|+....+. .|||| +.++||||+++++++..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 86 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGL--EYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN--- 86 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCe--EEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec---
Confidence 468899999999999999999765444 89999 35789999999999765
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 87 --~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH 132 (321)
T 2a2a_A 87 --RTDVVLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLH 132 (321)
T ss_dssp --SSEEEEEECCCCSCBHHHHHHTC----SCEEHHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999753 45899999999999999999998
No 265
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.33 E-value=1.5e-12 Score=139.08 Aligned_cols=98 Identities=27% Similarity=0.356 Sum_probs=82.6
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
..++|+..+.||+|+||+||+|+.. ++.|||| ..++||||+++++++.... .+...
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 109 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR----GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGT-GSWTQ 109 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET----TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-GGGCE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC----CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-CCCCc
Confidence 3467999999999999999999965 2389999 2359999999999987521 11267
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++|||||++|+|.++++.. .+++.++..++.|++.||+|||
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH 151 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLH 151 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999743 4899999999999999999998
No 266
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.33 E-value=9.7e-13 Score=135.36 Aligned_cols=96 Identities=28% Similarity=0.446 Sum_probs=84.1
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccCCCceE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~~~~~~ 763 (809)
.++|+..+.||+|+||.||+|+..++ +.||+| +.++||||+++++++.. ++..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 78 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNK---DKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPI 78 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTT---EEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSSC
T ss_pred hhheeeeeEecCCCceeEEEEEecCC---CeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCCe
Confidence 45788999999999999999997643 379999 57899999999999765 6779
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 764 ALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 764 ~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++||||+++|+|.++++..+ ..+++.++..++.|+++||+|||
T Consensus 79 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH 121 (267)
T 3t9t_A 79 CLVTEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLE 121 (267)
T ss_dssp EEEECCCTTCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcHHHHHhhCc---ccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997542 45899999999999999999998
No 267
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.33 E-value=9.2e-13 Score=139.04 Aligned_cols=104 Identities=26% Similarity=0.427 Sum_probs=85.9
Q ss_pred HhcccccccceeccCCceeEEEEEEC---CCCceeEEEEe---------------------cCC-CCcceeeEeeeeecc
Q 040849 701 KATDGFSLENLIGAGSFGSVYKGILN---HDDHETLVAVK---------------------RSI-RHRNLVKIITSCASV 755 (809)
Q Consensus 701 ~~~~~~~~~~~ig~G~~g~Vy~~~~~---~~~~~~~vavK---------------------~~l-~H~niv~l~~~~~~~ 755 (809)
...++|...+.||+|+||+||+|+.. +...++.|||| +.+ +||||+++++++..
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~- 98 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI- 98 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec-
Confidence 34567999999999999999999852 22355689999 345 89999999999765
Q ss_pred ccCCCceEEEEEeccCCCChhhhhcCCCC--------------CCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 756 DFQGNDFKALVYEFMVNGSLEEWLHPKPE--------------APRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 756 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~--------------~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++|||||++|+|.++++..+. ....+++.++..++.|+++||+|||
T Consensus 99 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH 162 (313)
T 1t46_A 99 ----GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA 162 (313)
T ss_dssp ----SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 6778999999999999999985431 1235899999999999999999998
No 268
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.33 E-value=2.3e-12 Score=135.20 Aligned_cols=102 Identities=25% Similarity=0.318 Sum_probs=80.5
Q ss_pred HhcccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCC
Q 040849 701 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 701 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
...++|...+.||+|+||.||+|+.... ++.|||| +.++||||+++++++..
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 84 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPK--KEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV----- 84 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC------CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-----
T ss_pred cchhhhhhhheeccccceEEEEEEECCC--CcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-----
Confidence 3457899999999999999999985443 3489999 46789999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCC----CCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPK----PEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~----~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.+++... ......+++.++..++.|+++||+|||
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH 138 (303)
T 2vwi_A 85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138 (303)
T ss_dssp SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 67799999999999999998631 112345899999999999999999998
No 269
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.33 E-value=1.7e-12 Score=136.97 Aligned_cols=95 Identities=25% Similarity=0.374 Sum_probs=84.1
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
++|+..+.||+|+||+||+|+....+. .|||| +.++||||+++++++.. ++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~ 75 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQ--IVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-----KR 75 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TT
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCc--EEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-----CC
Confidence 578899999999999999999765444 89999 46899999999999875 77
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++|||||++|+|.++++.. ..+++..+..++.|+++||+|||
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH 119 (311)
T 4agu_A 76 RLHLVFEYCDHTVLHELDRYQ----RGVPEHLVKSITWQTLQAVNFCH 119 (311)
T ss_dssp EEEEEEECCSEEHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCchHHHHHhhh----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999988743 35899999999999999999998
No 270
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.33 E-value=2e-12 Score=134.95 Aligned_cols=95 Identities=22% Similarity=0.417 Sum_probs=80.7
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
++|+..+.||+|+||+||+|+....+. .|||| +.++|||||++++++.. ++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 74 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHE--IVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-----DK 74 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCC--EEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TT
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCc--eEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-----CC
Confidence 468899999999999999999765544 89999 57899999999999775 77
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++|||||++ ++.+.+... ...+++.++..++.|+++||+|||
T Consensus 75 ~~~lv~e~~~~-~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH 118 (292)
T 3o0g_A 75 KLTLVFEFCDQ-DLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCH 118 (292)
T ss_dssp EEEEEEECCSE-EHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999986 555555432 245899999999999999999998
No 271
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.33 E-value=9.9e-13 Score=139.78 Aligned_cols=102 Identities=29% Similarity=0.495 Sum_probs=81.9
Q ss_pred cccccccceeccCCceeEEEEEECC---CCceeEEEEe---------------------cCCCCcceeeEeeeeeccccC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
.++|...+.||+|+||.||+|+... ...++.|||| +.++||||+++++++..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 104 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ---- 104 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC----
Confidence 4679999999999999999998542 2234589999 46799999999999765
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCC---CCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPE---APRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~---~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+...|+|||||++|+|.++++..+. ....+++.++..++.|+++||+|||
T Consensus 105 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH 157 (327)
T 2yfx_A 105 -SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157 (327)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh
Confidence 6678999999999999999985431 2245899999999999999999998
No 272
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.33 E-value=1e-12 Score=140.51 Aligned_cols=101 Identities=22% Similarity=0.194 Sum_probs=84.6
Q ss_pred HhcccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccC
Q 040849 701 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 701 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
...++|+..+.||+|+||+||+|+....+ +.|||| +.++|||||++++++..
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~---- 121 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSG--QIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR---- 121 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC----
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCC--CEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe----
Confidence 34567899999999999999999975543 489999 46799999999999865
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++ +|.+++.........+++..+..|+.||++||+|||
T Consensus 122 -~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH 170 (340)
T 3an0_A 122 -EGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 170 (340)
T ss_dssp -SSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 6789999999985 999888642112356899999999999999999998
No 273
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.32 E-value=1.4e-12 Score=135.37 Aligned_cols=95 Identities=23% Similarity=0.360 Sum_probs=83.5
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------------cCCCCcceeeEeeeeecccc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------------RSIRHRNLVKIITSCASVDF 757 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------------~~l~H~niv~l~~~~~~~~~ 757 (809)
++|+..+.||+|+||+||+|+....+. .|||| +.++||||+++++++..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--- 79 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGK--EYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN--- 79 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCC--eeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC---
Confidence 468899999999999999999765444 89998 35789999999999765
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 80 --~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH 125 (283)
T 3bhy_A 80 --KTDVVLILELVSGGELFDFLAEK----ESLTEDEATQFLKQILDGVHYLH 125 (283)
T ss_dssp --SSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCeEEEEEeecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999743 35899999999999999999998
No 274
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.32 E-value=2.1e-12 Score=133.57 Aligned_cols=96 Identities=25% Similarity=0.422 Sum_probs=84.5
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|...+.||+|+||.||+|+....+. .|||| +.++||||+++++++..
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 82 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGH--KVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST----- 82 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCc--eEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-----
Confidence 3578999999999999999999765444 89999 46899999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH 128 (276)
T 2h6d_A 83 PTDFFMVMEYVSGGELFDYICKH----GRVEEMEARRLFQQILSAVDYCH 128 (276)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999743 34899999999999999999998
No 275
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.32 E-value=6.1e-13 Score=142.56 Aligned_cols=104 Identities=26% Similarity=0.376 Sum_probs=84.5
Q ss_pred HHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------------cCCCCcceeeEeeeee
Q 040849 699 LFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------------RSIRHRNLVKIITSCA 753 (809)
Q Consensus 699 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------------~~l~H~niv~l~~~~~ 753 (809)
+....++|...+.||+|+||+||+|+....+. .||+| +.++|||||++++++.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 98 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRA--IRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE 98 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCC--EEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCc--eEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc
Confidence 34455679999999999999999999765544 89999 3578999999999976
Q ss_pred ccccCCCceEEEEEeccCCCChhhhhcCCCC------------------------------------CCCCCCHHHHHHH
Q 040849 754 SVDFQGNDFKALVYEFMVNGSLEEWLHPKPE------------------------------------APRNSNLLQRLSI 797 (809)
Q Consensus 754 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------------------------------~~~~~~~~~~~~i 797 (809)
. ++..++|||||++|+|.+++..... ....+++..+..|
T Consensus 99 ~-----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 173 (345)
T 3hko_A 99 D-----EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNI 173 (345)
T ss_dssp C-----SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHH
T ss_pred c-----CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHH
Confidence 5 7789999999999999999852100 0112457788999
Q ss_pred HHHHHHHhhhcC
Q 040849 798 AVDVASALDYLH 809 (809)
Q Consensus 798 ~~~ia~gl~yLH 809 (809)
+.|+++||+|||
T Consensus 174 ~~qi~~~l~~LH 185 (345)
T 3hko_A 174 MRQIFSALHYLH 185 (345)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999998
No 276
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.32 E-value=1.1e-12 Score=136.88 Aligned_cols=97 Identities=27% Similarity=0.454 Sum_probs=83.9
Q ss_pred cccccccc-eeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLEN-LIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~-~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.+.|...+ .||+|+||+||+|.+.....++.|||| +.++||||+++++++.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------ 88 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------ 88 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE------
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC------
Confidence 45677777 999999999999976555566789999 4689999999999973
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..++||||+++|+|.++++.. ..+++.++..++.|+++||+|||
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH 134 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLE 134 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHHhC----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 45689999999999999999753 34899999999999999999998
No 277
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.32 E-value=1.6e-12 Score=138.46 Aligned_cols=98 Identities=30% Similarity=0.549 Sum_probs=83.3
Q ss_pred ccccccceeccCCceeEEEEEECCCC--ceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDD--HETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~--~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
..|+..+.||+|+||+||+|+....+ .+..|||| +.++||||+++++++.. .
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~ 118 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-----Y 118 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-----S
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec-----C
Confidence 45777899999999999999875432 24569999 47899999999999765 6
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++|||||++|+|.++++.. ...+++.++..++.|+++||+|||
T Consensus 119 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH 164 (333)
T 1mqb_A 119 KPMMIITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLA 164 (333)
T ss_dssp SSEEEEEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999754 245899999999999999999998
No 278
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.32 E-value=1.5e-12 Score=138.83 Aligned_cols=96 Identities=21% Similarity=0.270 Sum_probs=84.6
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
..+|...+.||+|+||.||+++....+. .||+| +.++||||+++++++..
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 112 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKE--VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED----- 112 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCC--EEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence 3568899999999999999999766544 89998 46899999999999765
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..|+|||||++|+|.+++..+ ..+++.++..++.|+++||+|||
T Consensus 113 ~~~~~lv~e~~~~~~L~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH 158 (335)
T 2owb_A 113 NDFVFVVLELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLH 158 (335)
T ss_dssp SSEEEEEECCCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCCCCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999998743 35899999999999999999998
No 279
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.32 E-value=2.5e-12 Score=134.39 Aligned_cols=97 Identities=27% Similarity=0.409 Sum_probs=82.6
Q ss_pred cccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCCceEE
Q 040849 705 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGNDFKA 764 (809)
Q Consensus 705 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~~~~~ 764 (809)
+|....+||+|+||.||+|+....+. .|||| +.++|||||++++++.. .+..+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 95 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQV--RIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-----NGFIK 95 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCC--EEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCe--EEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-----CCcEE
Confidence 45556699999999999999765544 89999 56899999999999875 67899
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 765 LVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 765 lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+||||+++|+|.++++... ....+++..+..++.|+++||+|||
T Consensus 96 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH 139 (295)
T 2clq_A 96 IFMEQVPGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLH 139 (295)
T ss_dssp EEEECCSEEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998543 2345779999999999999999998
No 280
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.32 E-value=1.7e-12 Score=137.07 Aligned_cols=112 Identities=29% Similarity=0.509 Sum_probs=86.0
Q ss_pred HHHHhcccccccceeccCCceeEEEEEECC-CCceeEEEEe----------------------cCCCCcceeeEeeeeec
Q 040849 698 NLFKATDGFSLENLIGAGSFGSVYKGILNH-DDHETLVAVK----------------------RSIRHRNLVKIITSCAS 754 (809)
Q Consensus 698 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~~~~vavK----------------------~~l~H~niv~l~~~~~~ 754 (809)
++....++|...+.||+|+||.||+|+... ...++.|||| +.++||||+++++++..
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 107 (313)
T 3brb_A 28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107 (313)
T ss_dssp TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence 333445678999999999999999998754 3345689999 56899999999999876
Q ss_pred cccCCCceEEEEEeccCCCChhhhhcCCC--CCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 755 VDFQGNDFKALVYEFMVNGSLEEWLHPKP--EAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 755 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~--~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
....+....++||||+++|+|.+++.... .....+++.++..++.|+++||+|||
T Consensus 108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 164 (313)
T 3brb_A 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS 164 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 32222235699999999999999985321 23456999999999999999999998
No 281
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.32 E-value=1.5e-12 Score=140.45 Aligned_cols=108 Identities=22% Similarity=0.315 Sum_probs=89.8
Q ss_pred ccccHHHHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------c-----CCCCcceee
Q 040849 692 LRVSYQNLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------R-----SIRHRNLVK 747 (809)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~-----~l~H~niv~ 747 (809)
..+++.+.....++|...+.||+|+||+||+|+....+. .|||| + .+.|||||+
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKK--YYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCe--EEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 344555555566789999999999999999999765544 89999 2 235999999
Q ss_pred EeeeeeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 748 IITSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 748 l~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+++++.. .+..++||||+ +|+|.+++.... ...+++.++..|+.||+.||+|||
T Consensus 101 ~~~~~~~-----~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH 154 (360)
T 3llt_A 101 YHGKFMY-----YDHMCLIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLR 154 (360)
T ss_dssp EEEEEEE-----TTEEEEEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeeE-----CCeeEEEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999876 67899999999 999999998543 235899999999999999999998
No 282
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.32 E-value=1.9e-12 Score=146.29 Aligned_cols=96 Identities=23% Similarity=0.362 Sum_probs=82.4
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------------------cCCCCcceeeEe
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------------------RSIRHRNLVKII 749 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------------------~~l~H~niv~l~ 749 (809)
.+.|...+.||+|+||+||+|+....+. .|||| +.++|||||+++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHS--EKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCC--EEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCc--EEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 4679999999999999999999766544 89998 246899999999
Q ss_pred eeeeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 750 TSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 750 ~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+++.. +...|+|||||++|+|.+++..+ ..+++.++..|+.||+.||+|||
T Consensus 113 ~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH 163 (504)
T 3q5i_A 113 DVFED-----KKYFYLVTEFYEGGELFEQIINR----HKFDECDAANIMKQILSGICYLH 163 (504)
T ss_dssp EEEEC-----SSEEEEEEECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEc-----CCEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99765 77899999999999999998743 35899999999999999999998
No 283
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.32 E-value=9.7e-13 Score=142.11 Aligned_cols=103 Identities=18% Similarity=0.368 Sum_probs=83.8
Q ss_pred hcccccccceeccCCceeEEEEEECCCC---ceeEEEEe-------------------------------cCCCCcceee
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDD---HETLVAVK-------------------------------RSIRHRNLVK 747 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~---~~~~vavK-------------------------------~~l~H~niv~ 747 (809)
..++|...+.||+|+||+||+|....+. .++.|||| +.++|||||+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 3457999999999999999999986542 23479999 2567999999
Q ss_pred EeeeeeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 748 IITSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 748 l~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+++++... ..+....+|||||| +|+|.+++... ...+++.++..|+.||++||+|||
T Consensus 113 ~~~~~~~~-~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH 169 (364)
T 3op5_A 113 YWGSGLHD-KNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIH 169 (364)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeeeec-cCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99998752 12235689999999 99999999754 245999999999999999999998
No 284
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.32 E-value=1.6e-12 Score=135.01 Aligned_cols=96 Identities=21% Similarity=0.387 Sum_probs=84.6
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|+..+.||+|+||.||+|.....+. .||+| +.++||||+++++++.. +
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 77 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGL--EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----E 77 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----S
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCc--eEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-----C
Confidence 4679999999999999999999765544 89999 46899999999999765 7
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++||||+++|+|.+++..+ ..+++.++..++.|++.||+|||
T Consensus 78 ~~~~~v~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH 122 (284)
T 3kk8_A 78 SFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCH 122 (284)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999988743 35899999999999999999998
No 285
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=3.8e-12 Score=136.48 Aligned_cols=106 Identities=23% Similarity=0.164 Sum_probs=74.9
Q ss_pred EEEccCC-cCcccCCCCccCCCCCCEEEccc-cccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeCCC
Q 040849 495 YLDLSQN-QLNGTLPSNFGILKNLGVLDVSE-NKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSR 572 (809)
Q Consensus 495 ~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~ 572 (809)
.++++++ ++++ +|. +..+++|+.|+|++ |+|++..|..|.++++|+.|+|++|+|++.+|..|.++++|+.|||++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3566666 6663 555 77777777777775 777766667777777777777777777777777777777777777777
Q ss_pred CCcccccccccccCCCCCeEEccCCcccccC
Q 040849 573 NNLSGRIPKYFENFLFLQNLNLSFNHFEGEV 603 (809)
Q Consensus 573 N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~ 603 (809)
|+|++..+..|..++ |+.|++++|+|.+..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSC 119 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCG
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCC
Confidence 777766666666555 777777777776543
No 286
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.32 E-value=1.1e-12 Score=139.21 Aligned_cols=97 Identities=24% Similarity=0.413 Sum_probs=81.7
Q ss_pred ccccccceeccCCceeEEEEEECCCCc--eeEEEEe---------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDH--ETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~--~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
++|+..+.||+|+||+||+|+....+. ...||+| +.++|||||+++++|. +
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------G 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC------B
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc------C
Confidence 468889999999999999999765433 2247887 4679999999999874 3
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++||||+++|+|.++++..+ ..+++.++..|+.|+++||+|||
T Consensus 87 ~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH 132 (325)
T 3kex_A 87 SSLQLVTQYLPLGSLLDHVRQHR---GALGPQLLLNWGVQIAKGMYYLE 132 (325)
T ss_dssp SSEEEEEECCTTCBSHHHHHSSG---GGSCTTHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEEeCCCCCHHHHHHHcc---ccCCHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999998542 45889999999999999999998
No 287
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.32 E-value=5.4e-13 Score=148.34 Aligned_cols=102 Identities=28% Similarity=0.480 Sum_probs=86.0
Q ss_pred HHHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeecccc
Q 040849 697 QNLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDF 757 (809)
Q Consensus 697 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~ 757 (809)
+++....++|...+.||+|+||+||+|+...+ . .|||| ++++|||||++++++.
T Consensus 177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~-~--~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---- 249 (452)
T 1fmk_A 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-T--RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS---- 249 (452)
T ss_dssp TCSBCCGGGEEEEEEEEECSSCEEEEEEETTT-E--EEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred cccccChhHceeeeeecCCCCeEEEEEEECCC-c--eEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEc----
Confidence 34445567899999999999999999997653 3 69999 5689999999999875
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..++|||||++|+|.++++... ...+++.++..|+.|||+||+|||
T Consensus 250 --~~~~~iv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH 297 (452)
T 1fmk_A 250 --EEPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVE 297 (452)
T ss_dssp --SSSCEEEECCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCceEEEehhhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999997431 235899999999999999999998
No 288
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.32 E-value=1.7e-12 Score=137.24 Aligned_cols=99 Identities=24% Similarity=0.496 Sum_probs=70.2
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
.++|+..+.||+|+||+||+|..... ++.|||| +.++|||||++++++.. ++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~ 76 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTT--GVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-----EN 76 (317)
T ss_dssp ---------------CEEEEEECSSS--CCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-----TT
T ss_pred ccceeEeeEECCCCCEEEEEEEECCC--CcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-----CC
Confidence 45789999999999999999996544 3489999 57899999999999765 77
Q ss_pred eEEEEEeccCCCChhhhhcCCC--CCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKP--EAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~--~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++|||||+ |+|.+++..+. .....+++..+..++.||++||+|||
T Consensus 77 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH 125 (317)
T 2pmi_A 77 KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125 (317)
T ss_dssp EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999998 69999886431 12345899999999999999999998
No 289
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.32 E-value=2.6e-12 Score=134.53 Aligned_cols=97 Identities=25% Similarity=0.391 Sum_probs=80.0
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------------------------------
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------------------------------- 737 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------------------------------- 737 (809)
.++|+..+.||+|+||+||+|+....+. .||||
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 89 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNT--YYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAI 89 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTE--EEEEEEEECC-------------------------------CHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCc--EEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHH
Confidence 4679999999999999999999665444 89988
Q ss_pred -cCCCCcceeeEeeeeeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 738 -RSIRHRNLVKIITSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 738 -~~l~H~niv~l~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+.++|||||++++++... .++..++||||+++|+|.+++.. ..+++.++..++.|+++||+|||
T Consensus 90 l~~l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH 154 (298)
T 2zv2_A 90 LKKLDHPNVVKLVEVLDDP---NEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLH 154 (298)
T ss_dssp HHTCCCTTBCCEEEEEECS---SSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCeEEEEEEcC---CCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 135799999999997641 25679999999999999887642 35899999999999999999998
No 290
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.32 E-value=2.4e-12 Score=136.08 Aligned_cols=95 Identities=35% Similarity=0.460 Sum_probs=81.2
Q ss_pred cccccc-ceeccCCceeEEEEEECCCCceeEEEEe--------------------cC-CCCcceeeEeeeeeccccCCCc
Q 040849 704 DGFSLE-NLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RS-IRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 704 ~~~~~~-~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~-l~H~niv~l~~~~~~~~~~~~~ 761 (809)
+.|... +.||+|+||+||+|+.... ++.|||| .+ .+||||+++++++.. ++
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-----~~ 84 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLIT--SQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-----ED 84 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSS--CCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TT
T ss_pred eeEEecCceecCCceEEEEEEEEcCC--CcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-----CC
Confidence 457664 7899999999999995544 3489999 23 579999999999775 77
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..|+|||||++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH 128 (316)
T 2ac3_A 85 RFYLVFEKMRGGSILSHIHKR----RHFNELEASVVVQDVASALDFLH 128 (316)
T ss_dssp EEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999753 35899999999999999999998
No 291
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.32 E-value=1.7e-12 Score=134.91 Aligned_cols=95 Identities=25% Similarity=0.437 Sum_probs=84.2
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
++|...+.||+|+||.||+|+....+. .|||| +.++||||+++++++.. +
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 86 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKF--IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-----R 86 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTE--EEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----S
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCc--EEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-----C
Confidence 578999999999999999999765444 89999 46899999999999765 6
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++||||+++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH 131 (284)
T 2vgo_A 87 KRIYLMLEFAPRGELYKELQKH----GRFDEQRSATFMEELADALHYCH 131 (284)
T ss_dssp SEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999753 34899999999999999999998
No 292
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.32 E-value=1.9e-13 Score=147.18 Aligned_cols=160 Identities=16% Similarity=0.169 Sum_probs=104.6
Q ss_pred CCCCEEEeeCCeeecccCcCCcC-----CCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhcccCC
Q 040849 418 HKLQRLGLQGNKFLGEIPSSIGN-----LTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLSSL 492 (809)
Q Consensus 418 ~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l 492 (809)
+.|+.|+|++|.++......+.. .++|++|+|++|.++......+. ..+.++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~-----------------------~~L~~L 128 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLL-----------------------PVFLRA 128 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTH-----------------------HHHHTE
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHH-----------------------HHHHhc
Confidence 46777777777776433222221 13455555555555432211111 122334
Q ss_pred ceEEEccCCcCcccCCCCc-----cCCCCCCEEEccccccccc----cCccccCCCCCCEEeCcCCccccc----cchhh
Q 040849 493 SIYLDLSQNQLNGTLPSNF-----GILKNLGVLDVSENKLSGE----IPNSLGSCVRLEQLGMNGNFFQGN----IPSSF 559 (809)
Q Consensus 493 ~~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~ 559 (809)
+.|+|++|+++......+ ...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|++. ++..+
T Consensus 129 -~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L 207 (372)
T 3un9_A 129 -RKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQL 207 (372)
T ss_dssp -EEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHG
T ss_pred -cHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHH
Confidence 455555555543222222 2357899999999998753 445567889999999999999864 36677
Q ss_pred cCCCCCCEEeCCCCCcccc----cccccccCCCCCeEEccCCcccc
Q 040849 560 SSLRGIENLDLSRNNLSGR----IPKYFENFLFLQNLNLSFNHFEG 601 (809)
Q Consensus 560 ~~l~~L~~LdLs~N~l~~~----~p~~~~~l~~L~~l~ls~N~l~g 601 (809)
...++|+.|||++|+++.. ++..+...++|++||+++|+++.
T Consensus 208 ~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 208 DRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp GGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred hcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 8889999999999999864 44556677999999999999874
No 293
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.32 E-value=2.5e-12 Score=136.46 Aligned_cols=95 Identities=24% Similarity=0.437 Sum_probs=82.7
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
++|...+.||+|+||+||+|+....+. .|||| +.++|||||++++++.. ++.
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~ 74 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDN--LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-----EKS 74 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC-----SSC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCc--EEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee-----CCE
Confidence 568899999999999999999765444 89999 46789999999999765 678
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++|||||+ |+|.+++...+ ..+++.++..++.|+++||+|||
T Consensus 75 ~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH 117 (324)
T 3mtl_A 75 LTLVFEYLD-KDLKQYLDDCG---NIINMHNVKLFLFQLLRGLAYCH 117 (324)
T ss_dssp EEEEEECCS-EEHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecccc-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999998 59999987542 45899999999999999999998
No 294
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.32 E-value=2.8e-12 Score=133.51 Aligned_cols=95 Identities=31% Similarity=0.490 Sum_probs=81.7
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------------cCCCCcceeeEeeeeecc
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------------RSIRHRNLVKIITSCASV 755 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------------~~l~H~niv~l~~~~~~~ 755 (809)
.++|+..+.||+|+||+||+|+....+. .|||| +.++||||+++++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 94 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKS--VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN- 94 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCC--EEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT-
T ss_pred hccceehhccccCCceeEEEEEEcCCce--EEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC-
Confidence 3578999999999999999999765544 89999 35789999999999753
Q ss_pred ccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 756 DFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 756 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
. .++||||+++|+|.+++..+. ..+++.++..++.|+++||+|||
T Consensus 95 ----~--~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH 139 (287)
T 4f0f_A 95 ----P--PRMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYMQ 139 (287)
T ss_dssp ----T--TEEEEECCTTCBHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----C--CeEEEEecCCCCHHHHHhccc---CCccHHHHHHHHHHHHHHHHHHH
Confidence 2 279999999999999987542 46899999999999999999998
No 295
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.31 E-value=2.2e-12 Score=135.03 Aligned_cols=99 Identities=25% Similarity=0.516 Sum_probs=82.0
Q ss_pred ccccccceeccCCceeEEEEEECCCC-ceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDD-HETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~-~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
..|...+.||+|+||+||+|+..+.. ....||+| ++++||||++++++|.. +++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~ 100 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SEG 100 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC----SSS
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEc----CCC
Confidence 45788899999999999999975432 33468888 57899999999998754 256
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++||||+++|+|.++++.. ...+++.++..++.|+++||+|||
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH 145 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLA 145 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999754 245899999999999999999998
No 296
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.31 E-value=2.4e-12 Score=135.11 Aligned_cols=100 Identities=34% Similarity=0.499 Sum_probs=82.9
Q ss_pred ccccccceeccCCceeEEEEEECC--CCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNH--DDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~--~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
..|+..+.||+|+||.||+|++.. ...++.|||| +.++||||+++++++.. .+.
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEec---CCC
Confidence 348888999999999999999632 2245689999 47899999999999875 123
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
...++||||+++|+|.++++... ..+++.++..++.|+++||+|||
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH 143 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLG 143 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCcHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHhh
Confidence 66899999999999999996432 45899999999999999999998
No 297
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.31 E-value=2.3e-12 Score=144.91 Aligned_cols=95 Identities=24% Similarity=0.357 Sum_probs=84.4
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
+.|...+.||+|+||+||+|+....+. .|||| +.++|||||++++++.. .
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~ 98 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQ--ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-----K 98 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----S
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCC--EEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----C
Confidence 468899999999999999999765444 89999 56899999999999765 7
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..|+|||||++|+|.+++..+ ..+++.++..|+.|+++||+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH 143 (484)
T 3nyv_A 99 GYFYLVGEVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGITYMH 143 (484)
T ss_dssp SEEEEEECCCCSCBHHHHHHTC----SCCBHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999754 45899999999999999999998
No 298
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.31 E-value=1.8e-12 Score=136.10 Aligned_cols=98 Identities=22% Similarity=0.357 Sum_probs=84.3
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
..+.|+..+.||+|+||+||+|+....+. .||+| +.++||||+++++++.. ++
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 89 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGA--LAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-----DG 89 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCC--EEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----C-
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCc--EEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-----CC
Confidence 34578999999999999999999765444 89999 46799999999999765 67
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++|||||++|+|.+++... ...+++.++..++.|+++||+|||
T Consensus 90 ~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH 134 (302)
T 2j7t_A 90 KLWIMIEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLH 134 (302)
T ss_dssp CEEEEEECCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999998743 245899999999999999999998
No 299
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.31 E-value=7.6e-13 Score=138.97 Aligned_cols=96 Identities=29% Similarity=0.407 Sum_probs=75.6
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccCCCceEE
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQGNDFKA 764 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~~~~~~~ 764 (809)
++|...+.||+|+||+||+|+.. +. .|||| ..++||||+++++++.... ......+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~--~~--~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~~ 77 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR--GE--EVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLW 77 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT--TS--CEEEEECC-TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc--Cc--ceEEEEecccchhhHHHHHHHHHHHhccCcceeeeeeecccCC-CccceeE
Confidence 56899999999999999999854 23 79999 2389999999999987621 1113789
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 765 LVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 765 lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+|||||++|+|.+++++. .+++.++..++.|++.||+|||
T Consensus 78 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH 117 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLH 117 (303)
T ss_dssp EEEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CC
T ss_pred EEEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999643 4788889999999999999999
No 300
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.31 E-value=3.1e-12 Score=136.27 Aligned_cols=96 Identities=24% Similarity=0.379 Sum_probs=83.8
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------------cCCCCcceeeEeeeeec
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------------RSIRHRNLVKIITSCAS 754 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------------~~l~H~niv~l~~~~~~ 754 (809)
.++|+..+.||+|+||+||+|+....+. .|||| +.++|||||++++++..
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNK--EVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTE--EEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCc--EEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 4579999999999999999999665544 89999 35789999999999765
Q ss_pred cccCCCceEEEEEeccCCC-ChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 755 VDFQGNDFKALVYEFMVNG-SLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 755 ~~~~~~~~~~lv~Ey~~~G-sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++| +|.+++... ..+++..+..|+.|+++||+|||
T Consensus 101 -----~~~~~lv~e~~~~g~~l~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH 147 (335)
T 3dls_A 101 -----QGFFQLVMEKHGSGLDLFAFIDRH----PRLDEPLASYIFRQLVSAVGYLR 147 (335)
T ss_dssp -----SSEEEEEEECCTTSCBHHHHHHTC----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCEEEEEEEeCCCCccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999887 999999854 35899999999999999999998
No 301
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.31 E-value=1.3e-12 Score=135.62 Aligned_cols=102 Identities=25% Similarity=0.461 Sum_probs=84.5
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe----------------cCCCCcceeeEeeeeecccc----------
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------RSIRHRNLVKIITSCASVDF---------- 757 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------~~l~H~niv~l~~~~~~~~~---------- 757 (809)
.+|+..+.||+|+||.||+|+....+. .||+| +.++||||+++++++....+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 88 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGK--TYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSS 88 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCC--EEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCe--EEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccc
Confidence 468899999999999999999765444 89999 56899999999998754211
Q ss_pred -CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 -QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 -~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
......++||||+++|+|.++++.+. ...+++..+..++.|+++||+|||
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH 139 (284)
T 2a19_B 89 RSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIH 139 (284)
T ss_dssp CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12455899999999999999997542 245899999999999999999998
No 302
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.31 E-value=2.2e-12 Score=135.89 Aligned_cols=96 Identities=21% Similarity=0.275 Sum_probs=84.8
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
.++|...+.||+|+||.||+|+....+ +.|||| +.++||||+++++++..
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~----- 105 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRE--RIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI----- 105 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTT--EEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCC--eEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-----
Confidence 467999999999999999999976544 489999 57899999999999876
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+||||+++|+|.++++.. ..+++.++..++.|+++||+|||
T Consensus 106 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH 151 (309)
T 2h34_A 106 DGQLYVDMRLINGVDLAAMLRRQ----GPLAPPRAVAIVRQIGSALDAAH 151 (309)
T ss_dssp TTEEEEEEECCCCEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999743 35899999999999999999998
No 303
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.31 E-value=1.4e-12 Score=138.22 Aligned_cols=110 Identities=24% Similarity=0.445 Sum_probs=89.9
Q ss_pred cHHHHHHhcccccccceeccCCceeEEEEEECC---CCceeEEEEe---------------------cCCCCcceeeEee
Q 040849 695 SYQNLFKATDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVK---------------------RSIRHRNLVKIIT 750 (809)
Q Consensus 695 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~~~vavK---------------------~~l~H~niv~l~~ 750 (809)
..+++....++|+..+.||+|+||.||+|+... ...++.|||| +.++||||+++++
T Consensus 16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 344555667789999999999999999998652 1245689999 5789999999999
Q ss_pred eeeccccCCCceEEEEEeccCCCChhhhhcCCC------CCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 751 SCASVDFQGNDFKALVYEFMVNGSLEEWLHPKP------EAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 751 ~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~------~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++.. ++..++|||||++|+|.++++..+ .....+++.++..++.|+++||+|||
T Consensus 96 ~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH 155 (322)
T 1p4o_A 96 VVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN 155 (322)
T ss_dssp EECS-----SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEcc-----CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 9765 677899999999999999997421 11245789999999999999999998
No 304
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.31 E-value=3.2e-12 Score=134.22 Aligned_cols=95 Identities=31% Similarity=0.437 Sum_probs=83.5
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
.+.|...+.||+|+||.||+|+....+. .|||| +.++||||+++++++.. +.
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 93 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----DT 93 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCC--EEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TT
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCc--EEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----CC
Confidence 3468889999999999999999655444 89999 46799999999999876 67
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++||||+++|+|.+++.. ..+++.++..++.|+++||+|||
T Consensus 94 ~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH 136 (303)
T 3a7i_A 94 KLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLH 136 (303)
T ss_dssp EEEEEEECCTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999964 34899999999999999999998
No 305
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.31 E-value=1.7e-12 Score=145.84 Aligned_cols=95 Identities=23% Similarity=0.344 Sum_probs=84.1
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
+.|...+.||+|+||+||+|+....+. .|||| +.++|||||++++++.. ..
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~ 94 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQ--EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-----SS 94 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCC--EEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCC--EEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-----CC
Confidence 468999999999999999999765444 89999 46899999999999765 77
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..|+|||||++|+|.+++..+ ..+++.++..|+.|+++||+|||
T Consensus 95 ~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH 138 (486)
T 3mwu_A 95 SFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMH 138 (486)
T ss_dssp EEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998743 35899999999999999999998
No 306
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.31 E-value=2.6e-12 Score=135.43 Aligned_cols=95 Identities=24% Similarity=0.368 Sum_probs=81.9
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|+..+.||+|+||+||+|+..+ ++.|||| +.++|||||++++++.. +
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~ 91 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQ---GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-----E 91 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETT---SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-----S
T ss_pred HhhhHhhhhccCCCCeEEEEEEECC---CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-----C
Confidence 4679999999999999999999754 3389999 46799999999999764 6
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++|||||++ +|.+++.... ..+++.++..++.|+++||+|||
T Consensus 92 ~~~~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH 136 (311)
T 3niz_A 92 RCLTLVFEFMEK-DLKKVLDENK---TGLQDSQIKIYLYQLLRGVAHCH 136 (311)
T ss_dssp SCEEEEEECCSE-EHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCC-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 789999999984 8888887542 45899999999999999999998
No 307
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.31 E-value=2.5e-12 Score=134.80 Aligned_cols=101 Identities=20% Similarity=0.359 Sum_probs=83.8
Q ss_pred cccccc-ceeccCCceeEEEEEECCCCceeEEEEe----------------cCCCCcceeeEeeeeeccccCCCceEEEE
Q 040849 704 DGFSLE-NLIGAGSFGSVYKGILNHDDHETLVAVK----------------RSIRHRNLVKIITSCASVDFQGNDFKALV 766 (809)
Q Consensus 704 ~~~~~~-~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------~~l~H~niv~l~~~~~~~~~~~~~~~~lv 766 (809)
++|... +.||+|+||.||+|.....+. .|||| +..+||||+++++++... ..++...++|
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~~~lv 93 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQE--KFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKCLLIV 93 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCc--EEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCceEEEE
Confidence 456666 789999999999999765444 89999 456899999999987541 2235678999
Q ss_pred EeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 767 YEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 767 ~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
||||++|+|.+++..+. ...+++.++..++.|++.||+|||
T Consensus 94 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH 134 (299)
T 3m2w_A 94 MECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLH 134 (299)
T ss_dssp ECCCCSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred EeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998643 246899999999999999999998
No 308
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.30 E-value=2e-12 Score=137.57 Aligned_cols=95 Identities=25% Similarity=0.425 Sum_probs=82.3
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe------------------cCC-CCcceeeEeeeeeccccCCCceEE
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------RSI-RHRNLVKIITSCASVDFQGNDFKA 764 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------~~l-~H~niv~l~~~~~~~~~~~~~~~~ 764 (809)
++|+..+.||+|+||+||+|+....+ +.|||| +.+ +||||+++++++.. ++..+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~--~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-----~~~~~ 81 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTN--EYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPC-----GKYNA 81 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTT--EEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEE-----TTEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCC--cEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEec-----CCccE
Confidence 57999999999999999999965543 489999 345 89999999999765 67899
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 765 LVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 765 lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+||||+ +|+|.+++... ...+++.++..|+.|+++||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH 122 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVH 122 (330)
T ss_dssp EEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999 99999999854 245999999999999999999998
No 309
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.30 E-value=1.7e-12 Score=137.14 Aligned_cols=111 Identities=23% Similarity=0.328 Sum_probs=89.4
Q ss_pred cHHHHHHhcccccccceeccCCceeEEEEEECC---CCceeEEEEe---------------------cCC-CCcceeeEe
Q 040849 695 SYQNLFKATDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVK---------------------RSI-RHRNLVKII 749 (809)
Q Consensus 695 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~~~vavK---------------------~~l-~H~niv~l~ 749 (809)
...++....++|...+.||+|+||+||+|+... ...++.|||| +.+ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 344555667889999999999999999998532 2355689999 234 799999999
Q ss_pred eeeeccccCCCceEEEEEeccCCCChhhhhcCCCCC------------CCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 750 TSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEA------------PRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 750 ~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~------------~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+++.. .+...++|||||++|+|.+++...... ...+++.++..++.|+++||+|||
T Consensus 98 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 165 (316)
T 2xir_A 98 GACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 165 (316)
T ss_dssp EEECC----TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH
T ss_pred EEEec----CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH
Confidence 99764 245689999999999999999865321 123889999999999999999998
No 310
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.30 E-value=2.5e-12 Score=134.93 Aligned_cols=102 Identities=23% Similarity=0.357 Sum_probs=84.6
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccc-------
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVD------- 756 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~------- 756 (809)
.++|+..+.||+|+||.||+|+....+. .|||| +.++||||+++++++....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSR--YYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCe--EEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 3568999999999999999999765444 89999 5789999999999875421
Q ss_pred -cCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 757 -FQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 757 -~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..+....|+||||+++|+|.++++... ..+++.++..++.|+++||+|||
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH 133 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIH 133 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHH
Confidence 123467899999999999999997432 45788999999999999999998
No 311
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.30 E-value=2.6e-12 Score=137.06 Aligned_cols=102 Identities=21% Similarity=0.351 Sum_probs=84.2
Q ss_pred ccccccc-ceeccCCceeEEEEEECCCCceeEEEEe----------------cCCCCcceeeEeeeeeccccCCCceEEE
Q 040849 703 TDGFSLE-NLIGAGSFGSVYKGILNHDDHETLVAVK----------------RSIRHRNLVKIITSCASVDFQGNDFKAL 765 (809)
Q Consensus 703 ~~~~~~~-~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------~~l~H~niv~l~~~~~~~~~~~~~~~~l 765 (809)
.++|... ++||+|+||+||+|.....+. .|||| +.++||||+++++++... ..++...++
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~~~l 103 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQ--KCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENM-HHGKRCLLI 103 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCC--EEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhc-cCCCceEEE
Confidence 4578875 469999999999999765444 89999 467899999999997642 122456899
Q ss_pred EEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 766 VYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 766 v~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
|||||++|+|.+++..+. ...+++.++..++.|+++||+|||
T Consensus 104 v~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH 145 (336)
T 3fhr_A 104 IMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLH 145 (336)
T ss_dssp EEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998653 246999999999999999999998
No 312
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.30 E-value=3e-12 Score=136.13 Aligned_cols=97 Identities=21% Similarity=0.452 Sum_probs=84.2
Q ss_pred HhcccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccC
Q 040849 701 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 701 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
...++|+..+.||+|+||+||+|+....+ +.|||| +.++|||||++++++..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 104 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTN--ETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH---- 104 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTT--EEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE----
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCC--ceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec----
Confidence 44567999999999999999999966544 489999 46899999999999876
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++|||||+ |+|.+++... ..+++.++..|+.|+++||+|||
T Consensus 105 -~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~i~~ql~~~l~~LH 149 (329)
T 3gbz_A 105 -NHRLHLIFEYAE-NDLKKYMDKN----PDVSMRVIKSFLYQLINGVNFCH 149 (329)
T ss_dssp -TTEEEEEEECCS-EEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEEecCC-CCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 778999999998 5999999754 34899999999999999999998
No 313
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.30 E-value=2.4e-12 Score=136.74 Aligned_cols=100 Identities=24% Similarity=0.377 Sum_probs=84.8
Q ss_pred ccccccceeccCCceeEEEEEEC--CCCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILN--HDDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
++|+..+.||+|+||.||+|++. +...++.|||| +.++||||+++++++.. ++..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG---PGRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC---SSSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec---CCCc
Confidence 56889999999999999999963 12245689999 57899999999998764 2366
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++||||+++|+|.+++...+ ..+++.++..|+.|+++||+|||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH 144 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLG 144 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeecCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999997532 34899999999999999999998
No 314
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.30 E-value=3.9e-12 Score=132.53 Aligned_cols=94 Identities=23% Similarity=0.382 Sum_probs=81.4
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
++|+..+.||+|+||+||+|+... ++.|||| +.++|||||++++++.. ++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 73 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNY---GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-----KK 73 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETT---SCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-----SS
T ss_pred ccchhhhhcccCCCEEEEEEEcCC---CCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc-----CC
Confidence 468899999999999999999633 3379999 56899999999999765 67
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++||||+++ +|.+++.... ..+++.++..++.|+++||+|||
T Consensus 74 ~~~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH 117 (288)
T 1ob3_A 74 RLVLVFEHLDQ-DLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCH 117 (288)
T ss_dssp CEEEEEECCSE-EHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999985 9999987542 45899999999999999999998
No 315
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.30 E-value=3.6e-12 Score=134.02 Aligned_cols=94 Identities=36% Similarity=0.522 Sum_probs=80.2
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCC
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
..++|...+.||+|+||+||+|+... .+|+| +.++||||+++++++.
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------ 102 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG-----DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------ 102 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESSS-----EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------
T ss_pred cccceEEEeEecCCCCeEEEEEEECC-----EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc------
Confidence 34678999999999999999998532 36666 5789999999999864
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..++|||||++|+|.++++.. ...+++.++..|+.|+++||+|||
T Consensus 103 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH 149 (307)
T 3lb7_A 103 KDNLAIVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLH 149 (307)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEEEecCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 45589999999999999999754 246899999999999999999998
No 316
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.30 E-value=9.6e-13 Score=136.43 Aligned_cols=100 Identities=27% Similarity=0.479 Sum_probs=84.1
Q ss_pred HHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccCC
Q 040849 699 LFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 699 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
+....++|+..+.||+|+||.||+|+..++ +.|||| +.++||||+++++++.
T Consensus 8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------ 78 (279)
T 1qpc_A 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGH---TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------ 78 (279)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTT---EEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC------
T ss_pred cccCHHhhhheeeecCCCCeEEEEEEEcCC---cEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc------
Confidence 334456799999999999999999997543 379999 4689999999999864
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.+++.... ...+++.++..++.|+++||+|||
T Consensus 79 ~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH 126 (279)
T 1qpc_A 79 QEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIE 126 (279)
T ss_dssp SSSCEEEEECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345899999999999999997431 125899999999999999999998
No 317
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.30 E-value=3.7e-12 Score=134.12 Aligned_cols=102 Identities=27% Similarity=0.457 Sum_probs=81.6
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------------cCCCCcceeeEeeeeec
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------------RSIRHRNLVKIITSCAS 754 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------------~~l~H~niv~l~~~~~~ 754 (809)
.++|+..+.||+|+||+||+|+.... ++.|||| +.++|||||+++++|..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHS--GHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTT--CCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCC--CcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 56799999999999999999995544 4489999 12359999999999876
Q ss_pred cccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 755 VDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 755 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.........++||||++ |+|.+++.... ...+++.++..|+.|+++||+|||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH 137 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLH 137 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 32222235899999997 69999998653 234899999999999999999998
No 318
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.29 E-value=2.8e-12 Score=135.38 Aligned_cols=98 Identities=27% Similarity=0.395 Sum_probs=80.1
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe------------------cCCCCcceeeEeeeeeccccCCCceE
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------RSIRHRNLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------~~l~H~niv~l~~~~~~~~~~~~~~~ 763 (809)
..+.|+..+.||+|+||.||+|.....+. .|||| +.++||||+++++++.. ++..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQ--IVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFK-----NTDL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCC--EEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCC--EEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-----CCEE
Confidence 34679999999999999999999765444 89999 57899999999999876 6789
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 764 ALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 764 ~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++||||+++|+|.+++..+ ...+++.++..++.|+++||+|||
T Consensus 100 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH 142 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYLH 142 (314)
T ss_dssp EEEEECCTTEEHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999632 245899999999999999999998
No 319
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.29 E-value=3.1e-12 Score=135.66 Aligned_cols=95 Identities=21% Similarity=0.283 Sum_probs=81.8
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------------cCCCCcceeeEeeeeec
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------------RSIRHRNLVKIITSCAS 754 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------------~~l~H~niv~l~~~~~~ 754 (809)
.++|...+.||+|+||.||+|+....+ +.|||| +.++||||+++++++..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTC--KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 86 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCC--cEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence 356999999999999999999976544 489999 34689999999998753
Q ss_pred cccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 755 VDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 755 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..|+||||+++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 87 ------~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH 131 (322)
T 2ycf_A 87 ------EDYYIVLELMEGGELFDKVVGN----KRLKEATCKLYFYQMLLAVQYLH 131 (322)
T ss_dssp ------SSEEEEEECCTTEETHHHHSTT----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ------CceEEEEecCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 3489999999999999999743 45899999999999999999998
No 320
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.29 E-value=7.8e-13 Score=150.13 Aligned_cols=102 Identities=28% Similarity=0.480 Sum_probs=86.1
Q ss_pred HHHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeecccc
Q 040849 697 QNLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDF 757 (809)
Q Consensus 697 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~ 757 (809)
+++....++|+..+.||+|+||+||+|++..+ . .|||| +.++|||||++++++.
T Consensus 260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~-~--~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~---- 332 (535)
T 2h8h_A 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-T--RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS---- 332 (535)
T ss_dssp TCSBCCGGGEEEEEEEEECSSEEEEEEEETTT-E--EEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred cceecchhhhhhheecccCCCeEEEEEEECCC-c--eEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEe----
Confidence 34445567799999999999999999997653 3 69999 5689999999999875
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|||||||++|+|.++++... ...+++.++..|+.||++||+|||
T Consensus 333 --~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH 380 (535)
T 2h8h_A 333 --EEPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVE 380 (535)
T ss_dssp --SSSCEEEECCCTTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --eccceEeeehhcCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999997431 235899999999999999999998
No 321
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.29 E-value=2.8e-12 Score=134.74 Aligned_cols=95 Identities=24% Similarity=0.364 Sum_probs=83.6
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCCceE
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~~~~ 763 (809)
+.|...+.||+|+||+||+|+....+. .||+| +.++||||+++++++.. ++..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 81 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGK--LFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES-----TTHY 81 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEEC-----SSEE
T ss_pred ccceeeeeccCCCCceEEEEEECCCCC--EEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhccc-----CCEE
Confidence 568899999999999999999765444 89999 46799999999999765 6789
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 764 ALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 764 ~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++||||+++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 82 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH 123 (304)
T 2jam_A 82 YLVMQLVSGGELFDRILER----GVYTEKDASLVIQQVLSAVKYLH 123 (304)
T ss_dssp EEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998743 35899999999999999999998
No 322
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.29 E-value=5e-12 Score=133.73 Aligned_cols=96 Identities=30% Similarity=0.479 Sum_probs=81.4
Q ss_pred ccccceeccCCceeEEEEEECC--CCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 706 FSLENLIGAGSFGSVYKGILNH--DDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 706 ~~~~~~ig~G~~g~Vy~~~~~~--~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
|+..+.||+|+||+||++.+.. ...++.|||| +.++||||+++++++... +...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA---GAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET---TTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC---CCce
Confidence 4888999999999999987642 2245689999 468999999999998752 2467
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++||||+++|+|.+++... .+++.++..++.|++.||+|||
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~i~~~l~~~l~~LH 151 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLH 151 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS-----CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecccCCcHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999753 3899999999999999999998
No 323
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.29 E-value=2.6e-12 Score=133.33 Aligned_cols=99 Identities=25% Similarity=0.499 Sum_probs=83.4
Q ss_pred hcccccccceeccCCceeEEEEEECCC-CceeEEEEe---------------------cCCCCcceeeEeeeeeccccCC
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHD-DHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~-~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~ 759 (809)
..++|...+.||+|+||+||+|+.... +.+..|||| +.++||||+++++++.
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------ 83 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE------ 83 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC------
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc------
Confidence 346789999999999999999987543 345579999 4578999999999864
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.++++..+ ..+++.++..++.|+++||+|||
T Consensus 84 ~~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH 130 (281)
T 3cc6_A 84 EEPTWIIMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLE 130 (281)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHH
Confidence 345689999999999999997532 45899999999999999999998
No 324
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.29 E-value=3e-12 Score=142.90 Aligned_cols=100 Identities=21% Similarity=0.377 Sum_probs=77.3
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|+..+.||+|+||+||+|..... ++.|||| +.++|||||++++++.....++.
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~--~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 129 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLE--KRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKF 129 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC----CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCC--CcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccC
Confidence 36799999999999999999996654 3489999 46799999999999866444555
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
...|+|||||+ |+|.++++.. ..+++.++..|+.||++||+|||
T Consensus 130 ~~~~lv~e~~~-~~L~~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH 173 (458)
T 3rp9_A 130 DELYVVLEIAD-SDFKKLFRTP----VYLTELHIKTLLYNLLVGVKYVH 173 (458)
T ss_dssp CCEEEEECCCS-EEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeccc-cchhhhcccC----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 77999999985 7999999743 45899999999999999999998
No 325
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.29 E-value=2.4e-12 Score=137.79 Aligned_cols=95 Identities=27% Similarity=0.378 Sum_probs=81.4
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
+.|...+.||+|+||+||+|+....+ +.|||| +.++|||||++++++.. +
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~ 126 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNS--EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----E 126 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----T
T ss_pred hheeeeeEEccCCCEEEEEEEEccCC--eEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----C
Confidence 44888899999999999999965543 489999 46799999999999876 6
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++|||||+ |++.+++... ...+++.++..++.|+++||+|||
T Consensus 127 ~~~~lv~e~~~-g~l~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH 171 (348)
T 1u5q_A 127 HTAWLVMEYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLH 171 (348)
T ss_dssp TEEEEEEECCS-EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEecCC-CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 78999999997 6888888633 245899999999999999999998
No 326
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.29 E-value=3.9e-12 Score=131.46 Aligned_cols=94 Identities=22% Similarity=0.370 Sum_probs=72.5
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
++|+..+.||+|+||+||+|+.... ++.||+| +.++||||+++++++.. +
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 85 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTT--GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-----K 85 (275)
T ss_dssp CCBCCCC---------EEEEECTTT--CCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----S
T ss_pred cceEEEEEEEcCCCEEEEEEEECCC--CCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-----C
Confidence 5799999999999999999996544 3489999 46799999999999765 6
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++||||+ +|++.+++..+ ..+++.++..++.|+++||+|||
T Consensus 86 ~~~~lv~e~~-~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH 129 (275)
T 2eue_A 86 DEIIMVIEYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCH 129 (275)
T ss_dssp SCEEEEEECC-CEEHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEehhc-CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999 67888888754 35899999999999999999998
No 327
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.28 E-value=2.8e-12 Score=136.28 Aligned_cols=97 Identities=25% Similarity=0.489 Sum_probs=81.0
Q ss_pred ccccccceeccCCceeEEEEEECCCCc--eeEEEEe---------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDH--ETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~--~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
++|+..+.||+|+||+||+|+....+. ...||+| +.++|||||+++++|..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 88 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 88 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES------
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec------
Confidence 568899999999999999999754432 2246888 46899999999999874
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++||||+++|+|.++++.++ ..+++.++..|+.|+++||+|||
T Consensus 89 ~~~~~v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH 134 (327)
T 3poz_A 89 STVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLE 134 (327)
T ss_dssp SSEEEEEECCTTCBHHHHHHHST---TSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHh
Confidence 34789999999999999998543 45899999999999999999998
No 328
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.28 E-value=4.7e-12 Score=134.49 Aligned_cols=100 Identities=28% Similarity=0.494 Sum_probs=82.8
Q ss_pred ccccccceeccCCceeEEEEEECC--CCceeEEEEe--------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNH--DDHETLVAVK--------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~--~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
++|+..+.||+|+||.||+|++.. ...++.|||| +.++||||+++++++... +..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~ 117 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GRR 117 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec---CCC
Confidence 468889999999999999998631 2245689999 578999999999987641 234
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++||||+++|+|.++++..+ ..+++.++..++.|+++||+|||
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH 162 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLG 162 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHST---TSSCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999998542 45899999999999999999998
No 329
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.28 E-value=4.8e-12 Score=134.43 Aligned_cols=106 Identities=15% Similarity=0.220 Sum_probs=85.8
Q ss_pred cHHHHHHhccccccc-ceeccCCceeEEEEEECCCCceeEEEEe----------------------cCC-CCcceeeEee
Q 040849 695 SYQNLFKATDGFSLE-NLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSI-RHRNLVKIIT 750 (809)
Q Consensus 695 ~~~~~~~~~~~~~~~-~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l-~H~niv~l~~ 750 (809)
.+.....-.+.|... +.||+|+||+||+|.....+. .|||| +.+ +||||+++++
T Consensus 19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQ--EYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCC--EEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 333444444557766 889999999999999765544 89999 223 6799999999
Q ss_pred eeeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 751 SCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 751 ~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++.. ++..++|||||++|+|.+++.... ...+++.++..|+.|+++||+|||
T Consensus 97 ~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~ql~~~L~~LH 148 (327)
T 3lm5_A 97 VYEN-----TSEIILILEYAAGGEIFSLCLPEL--AEMVSENDVIRLIKQILEGVYYLH 148 (327)
T ss_dssp EEEC-----SSEEEEEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe-----CCeEEEEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9765 778999999999999999997542 356899999999999999999998
No 330
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.28 E-value=2.1e-12 Score=136.96 Aligned_cols=110 Identities=28% Similarity=0.480 Sum_probs=79.9
Q ss_pred HHhcccccccceeccCCceeEEEEEECCCCc-eeEEEEe----------------------cCCCCcceeeEeeeeeccc
Q 040849 700 FKATDGFSLENLIGAGSFGSVYKGILNHDDH-ETLVAVK----------------------RSIRHRNLVKIITSCASVD 756 (809)
Q Consensus 700 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~-~~~vavK----------------------~~l~H~niv~l~~~~~~~~ 756 (809)
....++|+..+.||+|+||+||+|+....+. ...|||| +.++|||||++++++....
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 3445679999999999999999999654321 1268999 5789999999999986521
Q ss_pred cCC-CceEEEEEeccCCCChhhhhcCCC--CCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 757 FQG-NDFKALVYEFMVNGSLEEWLHPKP--EAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 757 ~~~-~~~~~lv~Ey~~~GsL~~~l~~~~--~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..+ ....++||||+++|+|.+++...+ .....+++.++..|+.|+++||+|||
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH 154 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS 154 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 110 112499999999999999996432 12235899999999999999999998
No 331
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.28 E-value=3.3e-12 Score=147.55 Aligned_cols=90 Identities=27% Similarity=0.458 Sum_probs=78.9
Q ss_pred ceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCCceEEEEE
Q 040849 710 NLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGNDFKALVY 767 (809)
Q Consensus 710 ~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~~~~~lv~ 767 (809)
+.||+|+||+||+|.+.....++.|||| +.++|||||+++++|. .+..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~------~~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------AESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE------SSSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe------cCCEEEEE
Confidence 5799999999999987666566789999 4679999999999985 34589999
Q ss_pred eccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 768 EFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 768 Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
|||++|+|.++++.. ..+++.++..|+.||++||+|||
T Consensus 449 E~~~~g~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH 486 (635)
T 4fl3_A 449 EMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLE 486 (635)
T ss_dssp ECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EccCCCCHHHHHhhC----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999743 45899999999999999999998
No 332
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.28 E-value=3.5e-12 Score=135.80 Aligned_cols=96 Identities=23% Similarity=0.403 Sum_probs=84.3
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|+..+.||+|+||.||+|+....+. .|||| +.++||||+++++++.. .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~ 96 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGR--IVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-----K 96 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCC--EEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----T
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCc--eEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-----C
Confidence 3578999999999999999999765444 89999 46899999999999876 7
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++||||+++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 97 ~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH 141 (331)
T 4aaa_A 97 KRWYLVFEFVDHTILDDLELFP----NGLDYQVVQKYLFQIINGIGFCH 141 (331)
T ss_dssp TEEEEEEECCSEEHHHHHHHST----TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCcchHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999887643 34899999999999999999998
No 333
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.28 E-value=2.8e-12 Score=135.77 Aligned_cols=100 Identities=26% Similarity=0.423 Sum_probs=85.7
Q ss_pred HHHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeec
Q 040849 697 QNLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCAS 754 (809)
Q Consensus 697 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~ 754 (809)
.++....++|+..+.||+|+||.||+|+..+ .||+| +.++||||+++++++..
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 100 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-----EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS-----SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC-----eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec
Confidence 4444556789999999999999999999643 37777 46789999999999875
Q ss_pred cccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 755 VDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 755 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||+++|+|.++++..+ ..+++.++..++.|+++||+|||
T Consensus 101 -----~~~~~iv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH 147 (319)
T 2y4i_B 101 -----PPHLAIITSLCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLH 147 (319)
T ss_dssp -----SSCEEEECBCCCSEEHHHHTTSSC---CCCCSHHHHHHHHHHHHHHHHHH
T ss_pred -----CCceEEEeecccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 667999999999999999997542 45899999999999999999998
No 334
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.28 E-value=5e-10 Score=122.06 Aligned_cols=113 Identities=9% Similarity=0.015 Sum_probs=67.3
Q ss_pred cccCCccccCCC-cCcEEEcccCCCCCCCcccccCCCCCCEEEccccc---CcccCCccCCCCCCCCEEEcccCcccccC
Q 040849 136 GGQIPDNISHCV-NLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNN---LSGQIPSSFGNLSSLEVLSASANQFVGQI 211 (809)
Q Consensus 136 ~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 211 (809)
+.+-..+|.+++ .|+.+.+..+ ++.....+|.++++|+.+.+..|. ++......|.++.+|+.+.+..+ ++...
T Consensus 52 t~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~ 129 (394)
T 4gt6_A 52 SKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEID 129 (394)
T ss_dssp EEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEEC
T ss_pred eEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceeh
Confidence 334455677774 5888888653 666667778888888888887764 55444566777777777666543 44344
Q ss_pred cccccCCCCccEEEeecCcCCCCcchhccCCCCCceeccC
Q 040849 212 PKTLSQLKRMRFIGFGVNKLSGEIPFSIYNLSSLNYFEFP 251 (809)
Q Consensus 212 p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 251 (809)
...|..+.+|+.+.+..+ +.......|..+..|+.+.+.
T Consensus 130 ~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~ 168 (394)
T 4gt6_A 130 SEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLP 168 (394)
T ss_dssp TTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECC
T ss_pred hhhhhhhcccccccccce-eeeecccceeccccccccccc
Confidence 455666666666666432 222223334444444444443
No 335
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.27 E-value=1.6e-12 Score=138.05 Aligned_cols=112 Identities=25% Similarity=0.340 Sum_probs=89.3
Q ss_pred ccHHHHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCC-CCcceeeEeeeee
Q 040849 694 VSYQNLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSI-RHRNLVKIITSCA 753 (809)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l-~H~niv~l~~~~~ 753 (809)
+++.++....+.|+..+.||+|+||.||+|+....+. .|||| +++ +||||+++++++.
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQ--LAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCC--eEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 4444555667889999999999999999999765444 89999 234 8999999999986
Q ss_pred cccc-CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 754 SVDF-QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 754 ~~~~-~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.... ...+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH 146 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLH 146 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5211 11457899999999999999997542 245899999999999999999998
No 336
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.27 E-value=4.9e-12 Score=139.78 Aligned_cols=100 Identities=19% Similarity=0.295 Sum_probs=85.0
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|...+.||+|+||+||+|+....+ +.|||| +.++|||||++++++....+.+.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~--~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTE--KNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTT--EEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCC--cEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 467999999999999999999976544 489999 46799999999999876433333
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
...|+|||||+ |+|.++++.. ..+++.++..|+.||++||+|||
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~----~~l~~~~~~~i~~qil~aL~~LH 146 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTP----IFLTEEHIKTILYNLLLGENFIH 146 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEecCC-cCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67999999997 5999999743 45899999999999999999998
No 337
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.27 E-value=1.1e-12 Score=139.74 Aligned_cols=107 Identities=22% Similarity=0.363 Sum_probs=86.7
Q ss_pred HHHHhcccccccceeccCCceeEEEEEECCCC---ceeEEEEe---------------------cCC-CCcceeeEeeee
Q 040849 698 NLFKATDGFSLENLIGAGSFGSVYKGILNHDD---HETLVAVK---------------------RSI-RHRNLVKIITSC 752 (809)
Q Consensus 698 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~---~~~~vavK---------------------~~l-~H~niv~l~~~~ 752 (809)
++....++|...+.||+|+||+||+|+....+ ..+.||+| +.+ +|||||++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 34445678999999999999999999975432 22479999 345 899999999997
Q ss_pred eccccCCCceEEEEEeccCCCChhhhhcCCCC----------CCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 753 ASVDFQGNDFKALVYEFMVNGSLEEWLHPKPE----------APRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 753 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----------~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.. ++..++|||||++|+|.+++..... ....+++.++..++.|+++||+|||
T Consensus 120 ~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH 181 (333)
T 2i1m_A 120 TH-----GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA 181 (333)
T ss_dssp CS-----SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ec-----CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh
Confidence 65 6779999999999999999974310 1245899999999999999999998
No 338
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.27 E-value=3.8e-12 Score=136.76 Aligned_cols=98 Identities=21% Similarity=0.313 Sum_probs=83.2
Q ss_pred cccccccceeccCCceeEEEEEECC-CCceeEEEEe------------------------cCC-CCcceeeEeeeeeccc
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNH-DDHETLVAVK------------------------RSI-RHRNLVKIITSCASVD 756 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~~~~vavK------------------------~~l-~H~niv~l~~~~~~~~ 756 (809)
.++|+..+.||+|+||+||+|+... ...++.|||| +.+ +||||+++++++..
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 130 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-- 130 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE--
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee--
Confidence 3579999999999999999999742 1234589999 123 69999999999765
Q ss_pred cCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 757 FQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 757 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++|||||++|+|.+++..+ ..+++.++..++.||++||+|||
T Consensus 131 ---~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH 176 (355)
T 1vzo_A 131 ---ETKLHLILDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLALEHLH 176 (355)
T ss_dssp ---TTEEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CceEEEEeecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999753 35899999999999999999998
No 339
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.27 E-value=7.3e-10 Score=120.76 Aligned_cols=115 Identities=8% Similarity=0.041 Sum_probs=82.9
Q ss_pred CccCCccccccc-cCCccccCCCcCcccCCccccCCCcCcEEEcccCC---CCCCCcccccCCCCCCEEEcccccCcccC
Q 040849 112 RNEIPQEIGYLF-RLQFLWLDNNTFGGQIPDNISHCVNLESLRLGFNE---LVGKVPRKLGSLSKLRTLAVHYNNLSGQI 187 (809)
Q Consensus 112 ~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 187 (809)
+.+-..+|.++. .|+.+.+..+ ++..-..+|.++++|+.+.+..|. ++.....+|..+.+|+.+.+..+ ++...
T Consensus 52 t~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~ 129 (394)
T 4gt6_A 52 SKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEID 129 (394)
T ss_dssp EEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEEC
T ss_pred eEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceeh
Confidence 334455677764 5888888754 665667788999999999888764 55555677888888888877654 55455
Q ss_pred CccCCCCCCCCEEEcccCcccccCcccccCCCCccEEEeecC
Q 040849 188 PSSFGNLSSLEVLSASANQFVGQIPKTLSQLKRMRFIGFGVN 229 (809)
Q Consensus 188 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n 229 (809)
...|.++.+|+.+.+..+ +.......|..+.+|+.+.+..+
T Consensus 130 ~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~ 170 (394)
T 4gt6_A 130 SEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS 170 (394)
T ss_dssp TTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT
T ss_pred hhhhhhhcccccccccce-eeeecccceecccccccccccce
Confidence 667888889999988644 44455567888888888887654
No 340
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.27 E-value=4.6e-12 Score=131.87 Aligned_cols=96 Identities=23% Similarity=0.343 Sum_probs=84.1
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|+..+.||+|+||+||+|+....+. .|||| ++++||||+++++++.. .
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~--~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 93 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQ--EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-----S 93 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----S
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCc--EEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-----C
Confidence 3579999999999999999999765434 89999 47899999999999765 6
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++||||+++|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH 138 (287)
T 2wei_A 94 SSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMH 138 (287)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988743 35899999999999999999998
No 341
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.26 E-value=4.7e-12 Score=132.58 Aligned_cols=96 Identities=23% Similarity=0.347 Sum_probs=83.3
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------------cCC-CCcceeeEeeee
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------------RSI-RHRNLVKIITSC 752 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------------~~l-~H~niv~l~~~~ 752 (809)
.++|+..+.||+|+||.||+|.....+ +.|||| +++ +||||+++++++
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTC--KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhccceeeeecCCCceEEEEEEEcCcC--ceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 467999999999999999999976544 489999 123 499999999997
Q ss_pred eccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 753 ASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 753 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.. ++..++||||+++|+|.+++..+ ..+++.++..++.|+++||+|||
T Consensus 94 ~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH 141 (298)
T 1phk_A 94 ET-----NTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALH 141 (298)
T ss_dssp EC-----SSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cc-----CCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 65 77899999999999999999743 35899999999999999999998
No 342
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.26 E-value=7e-12 Score=134.10 Aligned_cols=98 Identities=29% Similarity=0.393 Sum_probs=82.1
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
..++|...+.||+|+||+||+|+.. ++.|||| ..++||||+++++++.... .....
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~-~~~~~ 114 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKWR----GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQ 114 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET----TEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC-SSCCC
T ss_pred ccccEEEEeeecCCCCcEEEEEEEc----CccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC-Cccce
Confidence 3467999999999999999999963 2389999 2389999999999986521 01137
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++||||+++|+|.+++++. .+++.++..++.|+++||+|||
T Consensus 115 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH 156 (342)
T 1b6c_B 115 LWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLH 156 (342)
T ss_dssp EEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999743 4899999999999999999998
No 343
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.26 E-value=7.7e-12 Score=130.99 Aligned_cols=96 Identities=25% Similarity=0.432 Sum_probs=83.4
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
++|+..+.||+|+||+||+|+....+. .|||| ++++||||+++++++.. ++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 75 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGE--VVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----EN 75 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCC--EEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TT
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCc--eEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec-----CC
Confidence 578899999999999999999765444 89999 57899999999999876 67
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++||||++ |+|.+++.... ...+++..+..++.|+++||+|||
T Consensus 76 ~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH 120 (299)
T 2r3i_A 76 KLYLVFEFLH-QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCH 120 (299)
T ss_dssp EEEEEEECCS-EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEccc-CCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999998 69999997542 245889999999999999999998
No 344
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.26 E-value=5e-12 Score=131.73 Aligned_cols=95 Identities=33% Similarity=0.472 Sum_probs=80.1
Q ss_pred HhcccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccC
Q 040849 701 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 701 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
...++|+..+.||+|+||+||+|+... .|||| +.++||||+++++++.
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~-----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----- 90 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST----- 90 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESSS-----EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----
T ss_pred cCccceeeeeEecCCCCeEEEEEEEcC-----ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-----
Confidence 345679999999999999999998432 48888 5789999999999753
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..++|||||++|+|.++++... ..+++.++..++.|+++||+|||
T Consensus 91 -~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~lH 137 (289)
T 3og7_A 91 -APQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLH 137 (289)
T ss_dssp -SSSCEEEEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCccEEEEEecCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 456899999999999999997542 45899999999999999999998
No 345
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.26 E-value=6.3e-12 Score=131.58 Aligned_cols=98 Identities=24% Similarity=0.479 Sum_probs=81.3
Q ss_pred cccccceeccCCceeEEEEEECCCC-ceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 705 GFSLENLIGAGSFGSVYKGILNHDD-HETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 705 ~~~~~~~ig~G~~g~Vy~~~~~~~~-~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
.|...+.||+|+||+||+|+..+.. .+..||+| +.++|||||++++++.. .+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLP----PEGL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC----SSSC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEec----CCCC
Confidence 3566789999999999999865432 34469999 46899999999999764 1344
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++||||+++|+|.++++.. ...+++.++..++.|+++||+|||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH 141 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLA 141 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEecccCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 59999999999999999853 245899999999999999999998
No 346
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.26 E-value=5.8e-12 Score=146.56 Aligned_cols=97 Identities=23% Similarity=0.259 Sum_probs=83.8
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cC-CCCcceeeEeeeeecccc
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RS-IRHRNLVKIITSCASVDF 757 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~-l~H~niv~l~~~~~~~~~ 757 (809)
..++|+..++||+|+||+||+|+....+. .|||| .. .+||+|+++++++..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~--~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~--- 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDE--LYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT--- 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCC--EEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC---
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCc--EEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe---
Confidence 45679999999999999999999766544 89999 12 379999999998544
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..|+|||||++|+|.++++.. ..+++.++..|+.||+.||+|||
T Consensus 414 --~~~~~lV~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH 459 (674)
T 3pfq_A 414 --MDRLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQ 459 (674)
T ss_dssp --SSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEEEeCcCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999853 35899999999999999999998
No 347
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.25 E-value=9.9e-12 Score=134.07 Aligned_cols=108 Identities=19% Similarity=0.256 Sum_probs=89.3
Q ss_pred cHHHHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------------------cCCCCc
Q 040849 695 SYQNLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------------------RSIRHR 743 (809)
Q Consensus 695 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------------------~~l~H~ 743 (809)
...++....++|...+.||+|+||.||+|.... ++.|||| +.++||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 89 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE---GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTT---SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCC---CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCc
Confidence 456677788999999999999999999998544 3489999 347899
Q ss_pred ceeeEeeeeeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 744 NLVKIITSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 744 niv~l~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
|||++++++...........|+||||++ |+|.+++... ...+++.++..++.|+++||+|||
T Consensus 90 ~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH 151 (362)
T 3pg1_A 90 NILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLH 151 (362)
T ss_dssp TBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999986532233457899999998 6888888754 246899999999999999999998
No 348
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.25 E-value=1.1e-11 Score=130.31 Aligned_cols=99 Identities=25% Similarity=0.445 Sum_probs=80.6
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe------------------------cCCCCcceeeEeeeeeccccC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
.++|...+.||+|+||.||+|.....+ +.|||| +.++||||+++++++.. +
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~ 78 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETL--CRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---E 78 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTC--CEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCC--cEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---C
Confidence 367999999999999999999965443 489998 57899999999999753 2
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+....++|||||++| +.+++.... ...+++.++..++.|+++||+|||
T Consensus 79 ~~~~~~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH 126 (305)
T 2wtk_C 79 EKQKMYMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLH 126 (305)
T ss_dssp ---CEEEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHH
Confidence 256789999999987 777776432 346899999999999999999998
No 349
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.25 E-value=6.5e-12 Score=135.50 Aligned_cols=98 Identities=27% Similarity=0.421 Sum_probs=84.3
Q ss_pred HhcccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------------cCC-CCcceeeEeee
Q 040849 701 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------------RSI-RHRNLVKIITS 751 (809)
Q Consensus 701 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------------~~l-~H~niv~l~~~ 751 (809)
...++|...+.||+|+||.||+|+....+. .|||| +.+ +||||++++++
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~--~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGH--EFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCc--EEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 344679999999999999999999765444 89999 123 79999999999
Q ss_pred eeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 752 CASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 752 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+.. ....++|||||++|+|.+++... ..+++..+..++.||+.||+|||
T Consensus 169 ~~~-----~~~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH 217 (365)
T 2y7j_A 169 YES-----SSFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEAVSFLH 217 (365)
T ss_dssp EEB-----SSEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred Eee-----CCEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 765 67899999999999999999743 35899999999999999999998
No 350
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.24 E-value=9.6e-12 Score=133.40 Aligned_cols=96 Identities=18% Similarity=0.272 Sum_probs=82.9
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------------------------cCCCCcce
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------------------------RSIRHRNL 745 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------------------------~~l~H~ni 745 (809)
.++|...+.||+|+||.||+|+. . ++.|||| +.++||||
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 105 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--D--NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC 105 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--T--TEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--C--CceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence 46799999999999999999997 2 2389998 24789999
Q ss_pred eeEeeeeeccccCCCceEEEEEeccCCCChhhh------hcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 746 VKIITSCASVDFQGNDFKALVYEFMVNGSLEEW------LHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 746 v~l~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~------l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+++++++.. ++..++|||||++|+|.++ +... ....+++.++..++.|+++||+|||
T Consensus 106 ~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH 168 (348)
T 2pml_X 106 LTCEGIITN-----YDEVYIIYEYMENDSILKFDEYFFVLDKN--YTCFIPIQVIKCIIKSVLNSFSYIH 168 (348)
T ss_dssp CCCSEEEES-----SSEEEEEEECCTTCBSSEESSSEESSCSS--SCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEee-----CCeEEEEEeccCCCcHHHHHHHhhhhhhc--cccCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999765 6789999999999999999 5432 2356999999999999999999998
No 351
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.24 E-value=6.2e-12 Score=134.70 Aligned_cols=98 Identities=21% Similarity=0.415 Sum_probs=79.5
Q ss_pred HhcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------------cCCCCcceeeEeeeeecc
Q 040849 701 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------------RSIRHRNLVKIITSCASV 755 (809)
Q Consensus 701 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------------~~l~H~niv~l~~~~~~~ 755 (809)
...+.|+..+.||+|+||+||+|+....+. .|||| +.++|||||++++++..
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 83 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQ--IVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH- 83 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCS--EEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC-
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCc--EEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee-
Confidence 345679999999999999999999655434 89999 35789999999999764
Q ss_pred ccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 756 DFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 756 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..++|||||++ +|.+++.... ..+++.++..++.|+++||+|||
T Consensus 84 ----~~~~~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH 129 (346)
T 1ua2_A 84 ----KSNISLVFDFMET-DLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLH 129 (346)
T ss_dssp ----TTCCEEEEECCSE-EHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHH
T ss_pred ----CCceEEEEEcCCC-CHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHH
Confidence 6789999999986 8998887542 45888999999999999999998
No 352
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.24 E-value=8.7e-12 Score=134.02 Aligned_cols=99 Identities=20% Similarity=0.334 Sum_probs=84.9
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCc
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGND 761 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~ 761 (809)
.++|...+.||+|+||+||+|+....+ +.|||| +.++||||+++++++....+++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTG--EIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCC--cEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 467999999999999999999976543 489999 468999999999998764445557
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++||||++ |+|.+++.. ..+++.++..++.|+++||+|||
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH 129 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLH 129 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999997 699999874 24899999999999999999998
No 353
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.23 E-value=5.1e-12 Score=135.34 Aligned_cols=100 Identities=19% Similarity=0.363 Sum_probs=78.0
Q ss_pred ccccccceeccCCceeEEEEEECCC-CceeEEEEe-------------------------------cCCCCcceeeEeee
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHD-DHETLVAVK-------------------------------RSIRHRNLVKIITS 751 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~-~~~~~vavK-------------------------------~~l~H~niv~l~~~ 751 (809)
++|...+.||+|+||+||+|+.... ..++.|||| +.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 5799999999999999999997641 133479998 23589999999999
Q ss_pred eeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 752 CASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 752 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+... +.++...|+||||| +|+|.+++... ..+++.++..|+.||++||+|||
T Consensus 117 ~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH 168 (345)
T 2v62_A 117 GLTE-FKGRSYRFMVMERL-GIDLQKISGQN----GTFKKSTVLQLGIRMLDVLEYIH 168 (345)
T ss_dssp EEEE-SSSCEEEEEEEECE-EEEHHHHCBGG----GBCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccc-cCCCcEEEEEEecc-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 8652 34467899999999 99999999754 25899999999999999999998
No 354
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.23 E-value=6.9e-12 Score=133.13 Aligned_cols=97 Identities=25% Similarity=0.489 Sum_probs=82.1
Q ss_pred ccccccceeccCCceeEEEEEECCCCc--eeEEEEe---------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDH--ETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~--~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
++|+..+.||+|+||+||+|+....+. ...||+| +.++|||||+++++|..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------ 88 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 88 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES------
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec------
Confidence 568999999999999999999755433 1246777 57899999999999864
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++|+||+++|+|.++++... ..+++.++..|+.|+++||+|||
T Consensus 89 ~~~~~v~~~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH 134 (327)
T 3lzb_A 89 STVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLE 134 (327)
T ss_dssp SSEEEEECCCSSCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHh
Confidence 34889999999999999998542 45899999999999999999998
No 355
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.23 E-value=6.6e-12 Score=145.61 Aligned_cols=100 Identities=27% Similarity=0.424 Sum_probs=84.4
Q ss_pred HhcccccccceeccCCceeEEEEEECCCC-ceeEEEEe---------------------cCCCCcceeeEeeeeeccccC
Q 040849 701 KATDGFSLENLIGAGSFGSVYKGILNHDD-HETLVAVK---------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 701 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~-~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
...++|+..+.||+|+||+||+|.+...+ .+..|||| +.++|||||++++++.
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~----- 461 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT----- 461 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----
Confidence 34467888999999999999999976432 34579999 4679999999999874
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+|||||++|+|.++++.++ ..+++.++..++.|+++||+|||
T Consensus 462 -~~~~~lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH 508 (656)
T 2j0j_A 462 -ENPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLE 508 (656)
T ss_dssp -SSSCEEEEECCTTCBHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -cCceEEEEEcCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999997542 45899999999999999999998
No 356
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.23 E-value=1.3e-11 Score=129.26 Aligned_cols=96 Identities=20% Similarity=0.286 Sum_probs=82.9
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe------------------cCC-CCcceeeEeeeeeccccCCCceE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------RSI-RHRNLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------~~l-~H~niv~l~~~~~~~~~~~~~~~ 763 (809)
.++|+..+.||+|+||+||+|+....+ +.|||| +.+ +|+|++++++++.. +...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-----~~~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNN--QQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-----GLHN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTT--EEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-----TTEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCC--cEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCC-----Ccee
Confidence 356999999999999999999965543 489999 234 89999999999765 7789
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 764 ALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 764 ~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++||||+ +|+|.++++..+ ..+++.++..++.|+++||+|||
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH 123 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCG---RKFSVKTVAMAAKQMLARVQSIH 123 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEec-CCCHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999 999999998542 45899999999999999999998
No 357
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.23 E-value=1.1e-11 Score=131.61 Aligned_cols=104 Identities=23% Similarity=0.392 Sum_probs=84.2
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------------cCCCCcceeeEeeeeeccc
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------------RSIRHRNLVKIITSCASVD 756 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------------~~l~H~niv~l~~~~~~~~ 756 (809)
..++|+..+.||+|+||+||+|+.... .++.|||| +.++||||+++++++....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKN-GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTT-TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCC-CCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 456799999999999999999997422 23489999 1348999999999986322
Q ss_pred cCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 757 FQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 757 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.......++||||++ |+|.+++.... ...+++.++..++.|+++||+|||
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH 137 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLH 137 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 233567899999998 69999997543 234899999999999999999998
No 358
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.23 E-value=6.4e-12 Score=138.21 Aligned_cols=103 Identities=23% Similarity=0.355 Sum_probs=80.8
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe----------------cCCCCcceeeEeeeeecccc-CCCceEEEE
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------RSIRHRNLVKIITSCASVDF-QGNDFKALV 766 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------~~l~H~niv~l~~~~~~~~~-~~~~~~~lv 766 (809)
..|+..+.||+|+||+||+|+....+. .|||| +.++|||||++++++..... .+..+.++|
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCc--EEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 358889999999999999999765444 89999 57899999999998764221 223457899
Q ss_pred EeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 767 YEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 767 ~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
||||++ ++.+.++........+++..+..|+.||++||+|||
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH 173 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999986 666665432112356899999999999999999998
No 359
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.23 E-value=3.3e-12 Score=132.27 Aligned_cols=97 Identities=31% Similarity=0.444 Sum_probs=81.4
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe------------------cCCCCcceeeEeeeeeccccCCCceEE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------RSIRHRNLVKIITSCASVDFQGNDFKA 764 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------~~l~H~niv~l~~~~~~~~~~~~~~~~ 764 (809)
.++|+..+.||+|+||+||+|+.. +. .|||| +.++||||+++++++.. .++..+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~--~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GN--KVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TE--EEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECC----C--CCE
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CC--EEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEc----CCCceE
Confidence 467999999999999999999864 23 89999 57899999999998754 245689
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 765 LVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 765 lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+||||+++|+|.+++.... ...+++.++..++.|+++||+|||
T Consensus 92 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH 134 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE 134 (278)
T ss_dssp EEECCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997432 123789999999999999999998
No 360
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.22 E-value=1.5e-11 Score=130.03 Aligned_cols=98 Identities=22% Similarity=0.290 Sum_probs=77.2
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCcceeeEeeeeeccc-------
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHRNLVKIITSCASVD------- 756 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~niv~l~~~~~~~~------- 756 (809)
+.|...+.||+|+||.||+|+....+ +.|||| +.++||||+++++++....
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCD--KRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTT--EEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CceeEEEEeccCCCeEEEEEEECCCC--eEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 56889999999999999999976543 489999 5789999999999874311
Q ss_pred --cCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 757 --FQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 757 --~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..+....++||||++ |+|.++++. ..+++.++..++.|+++||+|||
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH 137 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIH 137 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHH
Confidence 123567899999998 699999964 34889999999999999999998
No 361
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.22 E-value=1.2e-11 Score=133.55 Aligned_cols=100 Identities=20% Similarity=0.262 Sum_probs=84.4
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
..+.|+..+.||+|+||+||+|.....+ +.|||| +.++||||+++++++.....++.
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 102 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNK--VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCC--eEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcccc
Confidence 3457999999999999999999966543 489999 46899999999999876444444
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
...|+||||++ |+|.++++.. .+++.++..|+.|+++||+|||
T Consensus 103 ~~~~iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH 145 (364)
T 3qyz_A 103 KDVYIVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIH 145 (364)
T ss_dssp CCEEEEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999997 5999998743 4899999999999999999998
No 362
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.21 E-value=1.2e-11 Score=144.95 Aligned_cols=99 Identities=20% Similarity=0.359 Sum_probs=79.7
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccccCCCce
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~~~~~~~ 762 (809)
++|...+.||+|+||+||+|+.... .++.|||| +.++|||||++++++......+...
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNV-NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGG-TTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCC-CCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 5799999999999999999997541 23489999 5689999999999987632222233
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.|||||||++|+|.+++.. .++|.++..|+.||++||+|||
T Consensus 159 ~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH 199 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLH 199 (681)
T ss_dssp EEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999987753 4899999999999999999998
No 363
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.21 E-value=1.2e-11 Score=134.77 Aligned_cols=97 Identities=22% Similarity=0.429 Sum_probs=74.7
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCC-CcceeeEeeeeeccccC
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIR-HRNLVKIITSCASVDFQ 758 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~-H~niv~l~~~~~~~~~~ 758 (809)
..++|+..+.||+|+||+||+|.....+. .|||| +.+. |||||++++++.. +
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~--~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~---~ 81 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGE--VVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA---D 81 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCC--EEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---T
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCC--EEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec---C
Confidence 34679999999999999999999665444 89999 3454 9999999999764 2
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+....|+|||||+ |+|.++++. ..+++..+..++.|+++||+|||
T Consensus 82 ~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH 126 (388)
T 3oz6_A 82 NDRDVYLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLH 126 (388)
T ss_dssp TSSCEEEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 2457899999998 699999974 24899999999999999999998
No 364
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.21 E-value=1.6e-11 Score=136.67 Aligned_cols=98 Identities=17% Similarity=0.220 Sum_probs=80.7
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccc-cCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVD-FQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~-~~~ 759 (809)
.++|+..+.||+|+||+||+|..... ++.|||| +.++|||||++++++.... .++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTT--TEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCC--CCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 46799999999999999999996554 4489999 4679999999999986522 123
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
....|+|||||+++ +.+.++. .+++.++..++.|+++||+|||
T Consensus 139 ~~~~~lv~E~~~~~-l~~~~~~------~l~~~~~~~~~~qil~aL~~lH 181 (464)
T 3ttj_A 139 FQDVYLVMELMDAN-LCQVIQM------ELDHERMSYLLYQMLCGIKHLH 181 (464)
T ss_dssp CCEEEEEEECCSEE-HHHHHTS------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCC-HHHHHhh------cCCHHHHHHHHHHHHHHHHHHH
Confidence 45689999999864 7677652 3889999999999999999998
No 365
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.21 E-value=1.1e-11 Score=133.87 Aligned_cols=99 Identities=18% Similarity=0.310 Sum_probs=76.4
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccc-cCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVD-FQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~-~~~ 759 (809)
.+.|...+.||+|+||+||+|.....+ +.|||| +.++|||||++++++.... ..+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 101 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTG--AKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTC--CEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCC--CEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence 467999999999999999999965544 489999 4678999999999986521 112
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
....|+||||| +++|.++++. ..+++.++..++.|+++||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH 145 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIH 145 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 24579999999 8899999974 24899999999999999999998
No 366
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.20 E-value=2.1e-11 Score=129.57 Aligned_cols=94 Identities=22% Similarity=0.364 Sum_probs=80.9
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------cCCC-CcceeeEeeeeeccccCCCceEEE
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------RSIR-HRNLVKIITSCASVDFQGNDFKAL 765 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------~~l~-H~niv~l~~~~~~~~~~~~~~~~l 765 (809)
++|+..+.||+|+||+||+|+....+. .|||| +.++ ||||+++++++... .....++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~---~~~~~~l 110 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNE--KVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDP---VSRTPAL 110 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCC--EEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECT---TTCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCc--EEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccC---CCCceEE
Confidence 579999999999999999999765544 89999 3454 99999999997642 2566899
Q ss_pred EEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 766 VYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 766 v~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
||||+++|+|.++++ .+++.++..++.|+++||+|||
T Consensus 111 v~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH 147 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCH 147 (330)
T ss_dssp EEECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999985 2789999999999999999998
No 367
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.19 E-value=1.1e-11 Score=129.10 Aligned_cols=98 Identities=31% Similarity=0.388 Sum_probs=78.6
Q ss_pred cccccccceeccCCceeEEEEEECC-CCceeEEEEe-----------------------cCCCCcceeeEeeeeeccccC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNH-DDHETLVAVK-----------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~~~~vavK-----------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
.++|+..+.||+|+||+||+|++.. .+....|||| +.++||||+++++++..
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 92 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---- 92 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc----
Confidence 3578999999999999999998643 3344578999 46789999999999764
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++||||+++|+|.+++.... ..+++.++..++.|+++||+|||
T Consensus 93 --~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH 138 (291)
T 1u46_A 93 --PPMKMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLE 138 (291)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCceeeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHHHHHHH
Confidence 33899999999999999997532 35899999999999999999998
No 368
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.19 E-value=2.6e-11 Score=130.11 Aligned_cols=101 Identities=24% Similarity=0.368 Sum_probs=81.5
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeecccc---
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDF--- 757 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~--- 757 (809)
.++|+..+.||+|+||+||+|+....+. .|||| +.++|||||++++++.....
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQ--KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCC--EEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCC--EEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 3579999999999999999999765444 89999 45789999999999875211
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
...+..++|||||++ +|.+.+.... ..+++.++..|+.|+++||+|||
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH 141 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNVL---VKFTLSEIKRVMQMLLNGLYYIH 141 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEEeccCC-CHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 113468999999985 7877776542 45899999999999999999998
No 369
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.18 E-value=9.9e-12 Score=131.05 Aligned_cols=99 Identities=21% Similarity=0.278 Sum_probs=77.3
Q ss_pred HHhcccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------------cCC----CCcceeeEe
Q 040849 700 FKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------------RSI----RHRNLVKII 749 (809)
Q Consensus 700 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------------~~l----~H~niv~l~ 749 (809)
....++|+..+.||+|+||.||+|+....+ +.|||| +++ +||||++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDR--LQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTC--CEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCC--eEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 334567999999999999999999965443 489999 112 799999999
Q ss_pred eeeeccccCCCceEEEEEec-cCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 750 TSCASVDFQGNDFKALVYEF-MVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 750 ~~~~~~~~~~~~~~~lv~Ey-~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+++.. .+..++|||| +++|+|.+++..+ ..+++.++..++.|+++||+|||
T Consensus 105 ~~~~~-----~~~~~~v~e~~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH 156 (312)
T 2iwi_A 105 DWFET-----QEGFMLVLERPLPAQDLFDYITEK----GPLGEGPSRCFFGQVVAAIQHCH 156 (312)
T ss_dssp EEC----------CEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEec-----CCeEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99754 6778999999 8999999999753 35899999999999999999998
No 370
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.18 E-value=4.3e-11 Score=127.06 Aligned_cols=99 Identities=20% Similarity=0.172 Sum_probs=81.1
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|...+.||+|+||.||+|.....+ +.|||| +.++||||+++++++.. +
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-----~ 93 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSG--QIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-----E 93 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTT--EEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-----S
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCC--CEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-----C
Confidence 467889999999999999999976544 489999 46799999999999775 6
Q ss_pred ceEEEEEeccCCCChhhhhcCCC-CCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKP-EAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~-~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++||||+++ +|.+++.... .....+++..+..++.|+++||+|||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 142 (327)
T 3aln_A 94 GDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK 142 (327)
T ss_dssp SEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh
Confidence 789999999985 7877775210 11345899999999999999999998
No 371
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.18 E-value=1.5e-11 Score=131.20 Aligned_cols=103 Identities=19% Similarity=0.232 Sum_probs=82.5
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCC-CCcceeeEeeeeeccc---cC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSI-RHRNLVKIITSCASVD---FQ 758 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l-~H~niv~l~~~~~~~~---~~ 758 (809)
..+|+..+.||+|+||+||+|+....+. .|||| +++ +|||||++++++.... ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGR--EYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCC--EEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCc--EEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 3578999999999999999999765444 89999 244 4999999999984321 13
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+....++||||++ |+|.++++... ....+++.++..|+.|+++||+|||
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH 153 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMH 153 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3566899999996 79999886422 2345999999999999999999998
No 372
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.17 E-value=2e-11 Score=131.51 Aligned_cols=109 Identities=19% Similarity=0.285 Sum_probs=73.3
Q ss_pred HHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcceeeEeeeeecccc-
Q 040849 698 NLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRNLVKIITSCASVDF- 757 (809)
Q Consensus 698 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~niv~l~~~~~~~~~- 757 (809)
+.....++|...+.||+|+||+||+|+....+. .|||| +.++|||||++++++.....
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGM--SVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCC--EEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCC--EEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 445667889999999999999999999765444 89999 34689999999999865321
Q ss_pred -CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 -QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 -~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
......++|||||++ +|.+.+.........+++..+..++.|++.||+|||
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 146 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH 146 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 123347899999986 454444321112356889999999999999999999
No 373
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.16 E-value=3.7e-11 Score=129.92 Aligned_cols=98 Identities=17% Similarity=0.219 Sum_probs=81.0
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccc-cCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVD-FQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~-~~~ 759 (809)
.++|...+.||+|+||+||+|..... ++.|||| +.++|||||++++++.... ..+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTT--TEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred hhheeEeeeeEecCCEEEEEEEECCC--CceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 46799999999999999999996554 3489999 4679999999999976521 122
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
....|+|||||+ |+|.+++.. .+++.++..++.|+++||+|||
T Consensus 102 ~~~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH 144 (371)
T 2xrw_A 102 FQDVYIVMELMD-ANLCQVIQM------ELDHERMSYLLYQMLCGIKHLH 144 (371)
T ss_dssp CCEEEEEEECCS-EEHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEEcCC-CCHHHHHhh------ccCHHHHHHHHHHHHHHHHHHH
Confidence 347899999997 478888862 3889999999999999999998
No 374
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.16 E-value=5.1e-11 Score=131.30 Aligned_cols=97 Identities=22% Similarity=0.299 Sum_probs=82.3
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------------cCCCCcceeeEeeeeecccc
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------------RSIRHRNLVKIITSCASVDF 757 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------------~~l~H~niv~l~~~~~~~~~ 757 (809)
...|+..+.||+|+||+||+|.....+ +.|||| ....|+||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~--~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~--- 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVH--QHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF--- 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTT--EEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE---
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCC--cEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc---
Confidence 356899999999999999999966543 489999 23478999999999876
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..++|||||+ |+|.+++.... ...+++..+..|+.||++||+|||
T Consensus 171 --~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH 217 (429)
T 3kvw_A 171 --RNHICMTFELLS-MNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALH 217 (429)
T ss_dssp --TTEEEEEECCCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCeEEEEEeccC-CCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 678999999996 69999987543 234899999999999999999998
No 375
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.16 E-value=3.5e-12 Score=136.05 Aligned_cols=98 Identities=27% Similarity=0.359 Sum_probs=74.8
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----c------------------------CC---------CCcce
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----R------------------------SI---------RHRNL 745 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----~------------------------~l---------~H~ni 745 (809)
.++|+..+.||+|+||+||+|+.. ++.|||| . .+ +||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni 94 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIAD----HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF 94 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEET----TEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred cccchheeeecccCceEEEEEEeC----CceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence 356888999999999999999962 2489999 1 12 37777
Q ss_pred eeEeeeeecc-------------------------ccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHH
Q 040849 746 VKIITSCASV-------------------------DFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVD 800 (809)
Q Consensus 746 v~l~~~~~~~-------------------------~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ 800 (809)
|++.+++... ++.+++..|+|||||++|++.+.+.+ ..+++.++..|+.|
T Consensus 95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~q 169 (336)
T 2vuw_A 95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQ 169 (336)
T ss_dssp CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHH
T ss_pred hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHH
Confidence 7766653210 01125789999999999987777743 34899999999999
Q ss_pred HHHHhhhcC
Q 040849 801 VASALDYLH 809 (809)
Q Consensus 801 ia~gl~yLH 809 (809)
|++||+|||
T Consensus 170 i~~aL~~lH 178 (336)
T 2vuw_A 170 LTASLAVAE 178 (336)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999998
No 376
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.16 E-value=7.6e-12 Score=142.61 Aligned_cols=103 Identities=25% Similarity=0.392 Sum_probs=83.3
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEeeeeeccc-cCCCc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKIITSCASVD-FQGND 761 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~~~~~~~~-~~~~~ 761 (809)
++|...+.||+|+||.||+|.....+ +.|||| +.++|||||++++++.... +.+++
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg--~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTG--EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTT--CCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCC--cEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 67999999999999999999965443 489999 4679999999999865411 22356
Q ss_pred eEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 762 FKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 762 ~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
..++|||||++|+|.+++.... ....+++..+..|+.|++.||+|||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLH 138 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLH 138 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999998653 2345889999999999999999998
No 377
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.16 E-value=2.8e-11 Score=132.57 Aligned_cols=100 Identities=20% Similarity=0.339 Sum_probs=73.7
Q ss_pred ccc-cceeccCCceeEEEEEECCCCceeEEEEe------------------cCCCCcceeeEeeeeeccccCCCceEEEE
Q 040849 706 FSL-ENLIGAGSFGSVYKGILNHDDHETLVAVK------------------RSIRHRNLVKIITSCASVDFQGNDFKALV 766 (809)
Q Consensus 706 ~~~-~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------~~l~H~niv~l~~~~~~~~~~~~~~~~lv 766 (809)
|+. .++||+|+||+||+|+..+...++.|||| +.++|||||++++++.. .++...|+|
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~~~~lv 98 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLS---HADRKVWLL 98 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEE---TTTTEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEec---CCCCeEEEE
Confidence 554 46899999999999998754455589999 46899999999999854 236789999
Q ss_pred EeccCCCChhhhhcCCC-----CCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 767 YEFMVNGSLEEWLHPKP-----EAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 767 ~Ey~~~GsL~~~l~~~~-----~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
|||++ |+|.+++...+ .....+++.++..|+.||+.||+|||
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH 145 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 99997 58888775321 12235899999999999999999998
No 378
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.16 E-value=2.1e-11 Score=131.43 Aligned_cols=99 Identities=18% Similarity=0.311 Sum_probs=74.6
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccc-cCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVD-FQG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~-~~~ 759 (809)
.++|...+.||+|+||.||+|.....+ +.|||| +.++|||||++++++.... .++
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTG--LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTT--EEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCC--CEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 467999999999999999999965543 489999 4679999999999976421 122
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
....|+||||+ +++|.++++. ..+++.++..++.||++||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH 149 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIH 149 (367)
T ss_dssp CCCCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 35689999999 6899998864 34899999999999999999998
No 379
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.16 E-value=2.4e-11 Score=132.42 Aligned_cols=102 Identities=25% Similarity=0.331 Sum_probs=78.5
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe----------------cCCCCcceeeEeeeeecccc-CCCceEEEE
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------RSIRHRNLVKIITSCASVDF-QGNDFKALV 766 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------~~l~H~niv~l~~~~~~~~~-~~~~~~~lv 766 (809)
..|+..+.||+|+||+||+|+...+ . .||+| +.++|||||++++++..... .+....++|
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~-~--~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVES-D--EVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTT-E--EEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCC-C--eEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 4689999999999999999997654 2 48888 57899999999999865321 234458899
Q ss_pred EeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 767 YEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 767 ~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
||||+++.+....+.. .....+++..+..|+.|+++||+|||
T Consensus 117 ~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH 158 (394)
T 4e7w_A 117 LEYVPETVYRASRHYA-KLKQTMPMLLIKLYMYQLLRSLAYIH 158 (394)
T ss_dssp EECCSEEHHHHHHHHH-HTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eeccCccHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999875444332211 12345899999999999999999998
No 380
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.15 E-value=5.6e-12 Score=136.79 Aligned_cols=105 Identities=13% Similarity=0.144 Sum_probs=76.6
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------------cCCCCcceeeEeeee---
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------------RSIRHRNLVKIITSC--- 752 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------------~~l~H~niv~l~~~~--- 752 (809)
..++|...+.||+|+||+||+|+....+. .|||| +.++|||||++++.+
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~ 148 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGE--SFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFP 148 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCC--EEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCC
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCc--EEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhh
Confidence 34678889999999999999999654434 89999 345899999999443
Q ss_pred ----eccc-------cCCCc-----eEEEEEeccCCCChhhhhcCCCC---CCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 753 ----ASVD-------FQGND-----FKALVYEFMVNGSLEEWLHPKPE---APRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 753 ----~~~~-------~~~~~-----~~~lv~Ey~~~GsL~~~l~~~~~---~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.... +.+++ ..|+||||| +|+|.++++..+. ....++|..+..|+.||++||+|||
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 223 (377)
T 3byv_A 149 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH 223 (377)
T ss_dssp SEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 2210 00111 378999999 6899999975321 1123456888999999999999998
No 381
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.15 E-value=3.4e-11 Score=127.27 Aligned_cols=96 Identities=21% Similarity=0.238 Sum_probs=73.9
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeeccccCCC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDFQGN 760 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~~~~ 760 (809)
.++|+..+.||+|+||.||+|+....+. .|||| +.++||||+++++++.. +
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-----~ 96 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGH--VIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-----N 96 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCC--EEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----S
T ss_pred hccccccceeeecCCeeEEEEEEecCCe--EEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-----C
Confidence 4678899999999999999999765444 89999 45799999999999765 6
Q ss_pred ceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 761 DFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 761 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+..++||||+ ++.+..+.... ...+++.++..++.|+++||+|||
T Consensus 97 ~~~~lv~e~~-~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH 141 (318)
T 2dyl_A 97 TDVFIAMELM-GTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLK 141 (318)
T ss_dssp SEEEEEECCC-SEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEecc-CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999 45555555422 245899999999999999999998
No 382
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.15 E-value=3.1e-11 Score=129.04 Aligned_cols=94 Identities=19% Similarity=0.359 Sum_probs=80.0
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCC--cceeeEeeeeeccccC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRH--RNLVKIITSCASVDFQ 758 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H--~niv~l~~~~~~~~~~ 758 (809)
.+.|+..+.||+|+||+||+|.... ++.|||| +.++| |||+++++++..
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~---- 80 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEK---KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT---- 80 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTT---SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCC---CCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee----
Confidence 3568999999999999999998643 3489999 24555 999999999775
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||| +.+|+|.+++..+ ..+++.++..|+.|+++||+|||
T Consensus 81 -~~~~~lv~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH 125 (343)
T 3dbq_A 81 -DQYIYMVME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIH 125 (343)
T ss_dssp -SSEEEEEEC-CCSEEHHHHHHHS----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEEe-CCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 778999999 5688999999854 45899999999999999999998
No 383
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.15 E-value=4e-11 Score=125.24 Aligned_cols=98 Identities=28% Similarity=0.458 Sum_probs=79.3
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe------------------cCCCCcceeeEeeeeeccccCCCceE
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------RSIRHRNLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------~~l~H~niv~l~~~~~~~~~~~~~~~ 763 (809)
..++|+..+.||+|+||+||+|+....+ +.|||| +.++|++++..++++.. +++..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAG--EEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGA----EGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTT--EEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEE----ETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCC--ceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecC----CCCce
Confidence 3467999999999999999999965544 489999 35678887777776643 26778
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 764 ALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 764 ~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++||||+ +|+|.+++.... ..+++.++..++.|+++||+|||
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH 122 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIH 122 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcc-CCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999 999999997432 45899999999999999999998
No 384
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.15 E-value=1.2e-11 Score=132.90 Aligned_cols=99 Identities=17% Similarity=0.232 Sum_probs=79.7
Q ss_pred ccccccceeccCCceeEEEEEECCCC------ceeEEEEe---------------cCCCCcceee---------------
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDD------HETLVAVK---------------RSIRHRNLVK--------------- 747 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~------~~~~vavK---------------~~l~H~niv~--------------- 747 (809)
++|...+.||+|+||+||+|+..... .++.|||| ++++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 57999999999999999999976521 13489999 4678999998
Q ss_pred EeeeeeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 748 IITSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 748 l~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+++++.. +++..++||||| +|+|.+++.... ...+++.++..|+.||++||+|||
T Consensus 122 ~~~~~~~----~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH 176 (352)
T 2jii_A 122 CMGFGVH----QDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLH 176 (352)
T ss_dssp CCEEEEE----TTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccc----CCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4555432 257799999999 999999998542 245999999999999999999998
No 385
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.14 E-value=4.3e-11 Score=129.42 Aligned_cols=98 Identities=19% Similarity=0.311 Sum_probs=79.6
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeecccc-CC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDF-QG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~-~~ 759 (809)
.+.|...+.||+|+||+||+|.....+ +.|||| +.++|||||++++++..... ..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 118 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSG--EKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 118 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCC--CEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence 357889999999999999999966544 489999 46899999999999865211 01
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
....++||||++ |+|.+++. ..+++.++..++.|+++||+|||
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH 161 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIH 161 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH
Confidence 112499999998 68988874 23899999999999999999998
No 386
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.13 E-value=4.5e-11 Score=128.42 Aligned_cols=98 Identities=19% Similarity=0.309 Sum_probs=79.5
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCCCcceeeEeeeeecccc-CC
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIRHRNLVKIITSCASVDF-QG 759 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~H~niv~l~~~~~~~~~-~~ 759 (809)
.++|...+.||+|+||.||+|+....+ +.|||| +.++||||+++++++..... ..
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 100 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSG--EKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 100 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCC--CEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccc
Confidence 357889999999999999999976544 489999 46789999999999765210 01
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
....++||||++ |+|.+++.. .+++.++..++.||++||+|||
T Consensus 101 ~~~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH 143 (353)
T 3coi_A 101 FYDFYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIH 143 (353)
T ss_dssp CCCCEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 123599999997 689888752 3899999999999999999998
No 387
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.13 E-value=3.9e-11 Score=130.49 Aligned_cols=93 Identities=19% Similarity=0.362 Sum_probs=79.1
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCC--CcceeeEeeeeeccccCC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIR--HRNLVKIITSCASVDFQG 759 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~--H~niv~l~~~~~~~~~~~ 759 (809)
..|+..+.||+|+||+||+|.... ++.|||| +.++ |||||++++++..
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~----- 127 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEK---KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT----- 127 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTT---CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----
T ss_pred CceEEEEEEccCCCeEEEEEEcCC---CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-----
Confidence 459999999999999999998644 3489999 2343 6999999999775
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|+||| +.+|+|.+++... ..+++.++..|+.||++||+|||
T Consensus 128 ~~~~~lv~E-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH 172 (390)
T 2zmd_A 128 DQYIYMVME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIH 172 (390)
T ss_dssp SSEEEEEEE-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEe-cCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 678999999 5688999999854 35889999999999999999998
No 388
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.13 E-value=5e-11 Score=124.53 Aligned_cols=97 Identities=28% Similarity=0.463 Sum_probs=80.9
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe------------------cCCCCcceeeEeeeeeccccCCCceEE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------RSIRHRNLVKIITSCASVDFQGNDFKA 764 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------~~l~H~niv~l~~~~~~~~~~~~~~~~ 764 (809)
.++|+..+.||+|+||+||+|+....+ +.|||| +.++|+++++.++++.. .++..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAG--EEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGA----EGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTT--EEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEE----ETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCC--cEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccC----CCCceE
Confidence 467999999999999999999965543 489999 45678887777776643 267789
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 765 LVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 765 lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+||||+ +|+|.+++...+ ..+++.++..++.|+++||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH 122 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIH 122 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEec-CCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999 999999997432 45899999999999999999998
No 389
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.10 E-value=6.4e-11 Score=129.40 Aligned_cols=100 Identities=21% Similarity=0.345 Sum_probs=78.8
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCC--------CCcceeeEeeeeeccc
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSI--------RHRNLVKIITSCASVD 756 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l--------~H~niv~l~~~~~~~~ 756 (809)
++|+..+.||+|+||+||+|+....+ +.|||| +.+ .|+||+++++++....
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~--~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGK--KFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCC--eEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 57999999999999999999966544 489999 122 2899999999876311
Q ss_pred cCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 757 FQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 757 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.++...++||||| +|++.+++.... ...+++.++..|+.||++||+|||
T Consensus 115 -~~~~~~~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH 163 (397)
T 1wak_A 115 -VNGTHICMVFEVL-GHHLLKWIIKSN--YQGLPLPCVKKIIQQVLQGLDYLH 163 (397)
T ss_dssp -TTEEEEEEEECCC-CCBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCceEEEEEecc-CccHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1256799999999 566666665332 245899999999999999999998
No 390
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.09 E-value=1.6e-10 Score=123.11 Aligned_cols=97 Identities=19% Similarity=0.292 Sum_probs=80.4
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------c------CCCCcceeeEeeeeeccccC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------R------SIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~------~l~H~niv~l~~~~~~~~~~ 758 (809)
++|+..+.||+|+||+||+|..... .++.|||| + ...|++|+++++++..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~---- 88 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKA-GGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH---- 88 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTT-TTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE----
T ss_pred CceEEEEEEecCCCeEEEEEEecCC-CCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc----
Confidence 5799999999999999999986322 33589999 1 2345569999999765
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||| +|+|.+++...+ ...+++.++..++.|+++||+|||
T Consensus 89 -~~~~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH 135 (339)
T 1z57_A 89 -HGHICIVFELL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLH 135 (339)
T ss_dssp -TTEEEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCcEEEEEcCC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHHH
Confidence 67899999999 899999997543 245899999999999999999998
No 391
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.09 E-value=8.3e-11 Score=124.39 Aligned_cols=97 Identities=23% Similarity=0.322 Sum_probs=82.6
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------------cCC--CCcceeeEeeeee
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------------RSI--RHRNLVKIITSCA 753 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------------~~l--~H~niv~l~~~~~ 753 (809)
..++|+..+.||+|+||+||+|+....+ +.|||| +++ .||||+++++++.
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDN--LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTT--EEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCC--cEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 3567999999999999999999976554 489999 122 4799999999976
Q ss_pred ccccCCCceEEEEEeccCC-CChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 754 SVDFQGNDFKALVYEFMVN-GSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 754 ~~~~~~~~~~~lv~Ey~~~-GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
. ++..++||||+++ |+|.+++..+ ..+++..+..++.|+++||+|||
T Consensus 119 ~-----~~~~~lv~e~~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH 166 (320)
T 3a99_A 119 R-----PDSFVLILERPEPVQDLFDFITER----GALQEELARSFFWQVLEAVRHCH 166 (320)
T ss_dssp C-----SSEEEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred c-----CCcEEEEEEcCCCCccHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 5 6789999999986 8999999743 35899999999999999999998
No 392
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.09 E-value=1.4e-10 Score=129.06 Aligned_cols=96 Identities=26% Similarity=0.442 Sum_probs=77.8
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe------------------cCCCC-cceeeEeeeeeccccCCCceE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------RSIRH-RNLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------~~l~H-~niv~l~~~~~~~~~~~~~~~ 763 (809)
.++|...+.||+|+||.||+|+....+. .|||| +.++| ++|..+..++.. .+..
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~--~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~-----~~~~ 78 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNE--EVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVE-----GDYN 78 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCC--EEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEE-----TTEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCc--EEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEee-----CCEE
Confidence 3679999999999999999999765444 89999 34566 445555444443 6788
Q ss_pred EEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 764 ALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 764 ~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+|||||+ +|+|.+++.... ..+++.+++.|+.||+.||+|||
T Consensus 79 ~lvme~~-g~sL~~ll~~~~---~~l~~~~~~~i~~qi~~aL~yLH 120 (483)
T 3sv0_A 79 VLVMDLL-GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVH 120 (483)
T ss_dssp EEEEECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECC-CCCHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999 999999997432 45999999999999999999998
No 393
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.08 E-value=2e-10 Score=124.72 Aligned_cols=98 Identities=26% Similarity=0.338 Sum_probs=80.7
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------c------CCCCcceeeEeeeeeccc
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------R------SIRHRNLVKIITSCASVD 756 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~------~l~H~niv~l~~~~~~~~ 756 (809)
..++|...+.||+|+||+||+|+....+ +.|||| + ...|++|+++++++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-- 127 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQ--EWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-- 127 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTT--EEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE--
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCC--cEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc--
Confidence 3568999999999999999999976544 489999 1 1223459999999775
Q ss_pred cCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 757 FQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 757 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..++||||++ |+|.+++.... ...+++..+..++.|++.||+|||
T Consensus 128 ---~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH 174 (382)
T 2vx3_A 128 ---RNHLCLVFEMLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLA 174 (382)
T ss_dssp ---TTEEEEEEECCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred ---CCceEEEEecCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhc
Confidence 678999999996 59999998543 245899999999999999999998
No 394
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.06 E-value=4.7e-11 Score=125.93 Aligned_cols=103 Identities=18% Similarity=0.344 Sum_probs=83.7
Q ss_pred ccHHHHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe----------------------cCCC--CcceeeEe
Q 040849 694 VSYQNLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------RSIR--HRNLVKII 749 (809)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------~~l~--H~niv~l~ 749 (809)
+.++.+....++|+..+.||+|+||.||+|...+ ++.|||| ++++ ||||++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~ 94 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEK---KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTT---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCC---CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEE
Confidence 3444444556779999999999999999998644 3479999 2344 59999999
Q ss_pred eeeeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 750 TSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 750 ~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+++.. ++..++||| +.+|+|.+++... ..+++.++..++.|+++||+|||
T Consensus 95 ~~~~~-----~~~~~lv~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH 144 (313)
T 3cek_A 95 DYEIT-----DQYIYMVME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIH 144 (313)
T ss_dssp EEEEC-----SSEEEEEEC-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeec-----CCEEEEEEe-cCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99765 678999999 6688999999754 35899999999999999999998
No 395
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.04 E-value=1.1e-10 Score=126.48 Aligned_cols=100 Identities=20% Similarity=0.318 Sum_probs=81.4
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCC-----------CCcceeeEeeeee
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSI-----------RHRNLVKIITSCA 753 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l-----------~H~niv~l~~~~~ 753 (809)
++|...+.||+|+||+||+|+....+ +.|||| +++ .||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNN--THVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTT--EEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCC--cEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 57999999999999999999965544 489999 112 3899999999976
Q ss_pred ccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 754 SVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 754 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
... .+....++||||+ +|+|.+++.... ...+++.++..++.||+.||+|||
T Consensus 97 ~~~-~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH 148 (373)
T 1q8y_A 97 HKG-PNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMH 148 (373)
T ss_dssp EEE-TTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccC-CCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHH
Confidence 521 1233789999999 899999997543 245899999999999999999998
No 396
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.04 E-value=1.1e-10 Score=128.45 Aligned_cols=95 Identities=22% Similarity=0.350 Sum_probs=75.0
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------cCC-CCcceeeEeeeeeccccCCCceEE
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------RSI-RHRNLVKIITSCASVDFQGNDFKA 764 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------~~l-~H~niv~l~~~~~~~~~~~~~~~~ 764 (809)
..+|...++||+|+||+||.....++ . .|||| +.+ +|||||++++++.. +...|
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~-~--~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~-----~~~~~ 94 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDN-R--DVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKD-----RQFQY 94 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSS-S--EEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEE-----TTEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCC-e--EEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEec-----CCEEE
Confidence 34688899999999999553332222 3 89999 345 89999999998765 77899
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 765 LVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 765 lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+|||||+ |+|.+++.... ....+.++..++.||++||+|||
T Consensus 95 lv~E~~~-g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH 135 (432)
T 3p23_A 95 IAIELCA-ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLH 135 (432)
T ss_dssp EEEECCS-EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEECCC-CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHH
Confidence 9999996 69999998653 23445567889999999999998
No 397
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.03 E-value=1.5e-10 Score=127.88 Aligned_cols=95 Identities=25% Similarity=0.285 Sum_probs=70.4
Q ss_pred ccccceeccCCceeEEEEEECCCCceeEEEEe-----------------c-CCCCcceeeEeeeeeccccCCCceEEEEE
Q 040849 706 FSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------R-SIRHRNLVKIITSCASVDFQGNDFKALVY 767 (809)
Q Consensus 706 ~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------~-~l~H~niv~l~~~~~~~~~~~~~~~~lv~ 767 (809)
|...++||+|+||+||.+.... ++.|||| + ..+|||||++++++.. ++..|+||
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~---g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-----~~~~~lv~ 88 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQ---GRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT-----DRFLYIAL 88 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESS---SSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-----SSEEEEEE
T ss_pred eeccCeEeeCCCeEEEEEEEEC---CeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEec-----CCeEEEEE
Confidence 4456889999999997655333 3389999 2 2489999999998764 77899999
Q ss_pred eccCCCChhhhhcCCCCCCCC---CCHHHHHHHHHHHHHHhhhcC
Q 040849 768 EFMVNGSLEEWLHPKPEAPRN---SNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 768 Ey~~~GsL~~~l~~~~~~~~~---~~~~~~~~i~~~ia~gl~yLH 809 (809)
|||+ |+|.+++......... .++.++..|+.||++||+|||
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 132 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH
Confidence 9996 6999999865322111 134456789999999999998
No 398
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.01 E-value=9.1e-11 Score=126.89 Aligned_cols=100 Identities=10% Similarity=-0.081 Sum_probs=66.2
Q ss_pred cccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------------cCCCCcceeeEee------
Q 040849 703 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------------RSIRHRNLVKIIT------ 750 (809)
Q Consensus 703 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------------~~l~H~niv~l~~------ 750 (809)
..+|...+.||+|+||+||+|+....+. .|||| +. +|||||+++.
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~ 137 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLE--DFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPS 137 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTE--EEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCC
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCc--eeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeee
Confidence 4458899999999999999999765544 89999 23 6999888653
Q ss_pred -eeecccc------CC------CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHH------HHHHHHHHHHhhhcC
Q 040849 751 -SCASVDF------QG------NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQR------LSIAVDVASALDYLH 809 (809)
Q Consensus 751 -~~~~~~~------~~------~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~------~~i~~~ia~gl~yLH 809 (809)
++..... .+ ....|+|||||+ |+|.++++..+ ..+.+..+ ..++.||++||+|||
T Consensus 138 d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~vk~~i~~qi~~aL~~LH 211 (371)
T 3q60_A 138 DAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD---FVYVFRGDEGILALHILTAQLIRLAANLQ 211 (371)
T ss_dssp EEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH---HSCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc---cccchhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 3221100 00 144899999999 89999998532 22455556 788899999999998
No 399
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.00 E-value=7.2e-08 Score=104.35 Aligned_cols=146 Identities=12% Similarity=0.121 Sum_probs=70.5
Q ss_pred CccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCCCCcEEeCcCCcCccccCcchhccc
Q 040849 411 PGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQNLILLGLSNNNLTGTIPTEVIGLS 490 (809)
Q Consensus 411 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 490 (809)
...+..+.+|+.+.+..+ +.......|.++..|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~----------- 275 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK----------- 275 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-----------
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-----------
Confidence 344445555555555443 22233344555555555555443 33344445555555555544322 21
Q ss_pred CCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccccCccccCCCCCCEEeCcCCccccccchhhcCCCCCCEEeC
Q 040849 491 SLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLRGIENLDL 570 (809)
Q Consensus 491 ~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL 570 (809)
......|..+++|+.+++.++.++.....+|.+|++|+.++|..+ ++..-..+|.++++|+.+.+
T Consensus 276 --------------~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 276 --------------TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp --------------EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred --------------eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 122234445555555555555555444455555555555555433 44344445555666665555
Q ss_pred CCCCcccccccccccC
Q 040849 571 SRNNLSGRIPKYFENF 586 (809)
Q Consensus 571 s~N~l~~~~p~~~~~l 586 (809)
..+ ++..-..+|.+.
T Consensus 341 p~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 341 PKS-ITLIESGAFEGS 355 (379)
T ss_dssp CTT-CCEECTTTTTTS
T ss_pred CCc-cCEEchhHhhCC
Confidence 433 444444455444
No 400
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=98.99 E-value=3.2e-10 Score=121.67 Aligned_cols=97 Identities=20% Similarity=0.346 Sum_probs=77.9
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-------------------cCCCCcc------eeeEeeeeeccccC
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-------------------RSIRHRN------LVKIITSCASVDFQ 758 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-------------------~~l~H~n------iv~l~~~~~~~~~~ 758 (809)
++|+..+.||+|+||+||+|.....+ ++.|||| +.++|++ ++++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~---- 93 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARG-KSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF---- 93 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTT-TEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE----
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCC-ceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee----
Confidence 57999999999999999999975442 2489999 2344444 8999988765
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..++||||+ +|++.+++.... ...+++.++..|+.||++||+|||
T Consensus 94 -~~~~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH 140 (355)
T 2eu9_A 94 -HGHMCIAFELL-GKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLH 140 (355)
T ss_dssp -TTEEEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCeEEEEEecc-CCChHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999 667777776432 245899999999999999999998
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.97 E-value=6.3e-12 Score=126.86 Aligned_cols=148 Identities=14% Similarity=0.147 Sum_probs=80.9
Q ss_pred CCCcccccccCCCCCcEEEEECCC---CCCccccCc-cccCCCCccEEeCCCCCCCccCCc-cccccccCCc--cccCCC
Q 040849 61 HFCQWKGVTCSPRHQRVTALLLPS---LLLQGSLSP-HIGNLSFLRVLDLKNNSFRNEIPQ-EIGYLFRLQF--LWLDNN 133 (809)
Q Consensus 61 ~~c~w~gv~c~~~~~~v~~l~l~~---~~l~g~~~~-~l~~l~~L~~LdLs~n~l~~~~p~-~~~~l~~L~~--L~Ls~N 133 (809)
..|.|.|+.|+....+|+.+..++ ..++|.+.+ .+..++. .|...+|.-++.++- .|...+.|+. ++++.|
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 368999999987656776555444 233444432 1112211 222333333322221 2455555655 666766
Q ss_pred cCc---ccCCccccCCCcCcEEEcccCCCCC--CCcccccCCCCCCEEEcccccCcccCCccCCCCC--CCCEEEcccCc
Q 040849 134 TFG---GQIPDNISHCVNLESLRLGFNELVG--KVPRKLGSLSKLRTLAVHYNNLSGQIPSSFGNLS--SLEVLSASANQ 206 (809)
Q Consensus 134 ~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~ 206 (809)
... +.++....++++|++|+|++|++++ .+|..+..+++|++|+|++|+|++. ..+..+. +|++|+|++|.
T Consensus 154 ~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Np 231 (267)
T 3rw6_A 154 RRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNS 231 (267)
T ss_dssp SHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTST
T ss_pred HHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCc
Confidence 432 1122222456777777777777776 3345566777777777777777653 2233333 67777777777
Q ss_pred ccccCc
Q 040849 207 FVGQIP 212 (809)
Q Consensus 207 l~~~~p 212 (809)
+++.+|
T Consensus 232 l~~~~~ 237 (267)
T 3rw6_A 232 LCDTFR 237 (267)
T ss_dssp TGGGCS
T ss_pred CccccC
Confidence 665444
No 402
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.96 E-value=4.4e-10 Score=119.74 Aligned_cols=84 Identities=12% Similarity=0.225 Sum_probs=55.9
Q ss_pred CCCCCCEEEccccccccccCcccc---CCCCCCEEeCcCCccccc----cchhhcCCCCCCEEeCCCCCccccccccccc
Q 040849 513 ILKNLGVLDVSENKLSGEIPNSLG---SCVRLEQLGMNGNFFQGN----IPSSFSSLRGIENLDLSRNNLSGRIPKYFEN 585 (809)
Q Consensus 513 ~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~ 585 (809)
.+++|+.|+|++|.+....+..+. .+++|++|+|+.|.+++. ++..+..+++|+.|||++|.++...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 467888888888887654433332 467788888888888764 3344456688888888888877554444443
Q ss_pred -CCCCCeEEccCCc
Q 040849 586 -FLFLQNLNLSFNH 598 (809)
Q Consensus 586 -l~~L~~l~ls~N~ 598 (809)
+ ...++++.|+
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 4567777776
No 403
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=2.1e-10 Score=122.14 Aligned_cols=86 Identities=10% Similarity=0.152 Sum_probs=49.0
Q ss_pred CCCCccEEEeecCcCCCCcchhcc---CCCCCceeccCCcccccccChhhh---cCCCCCcEEEccCccccccCCccccc
Q 040849 217 QLKRMRFIGFGVNKLSGEIPFSIY---NLSSLNYFEFPVNQLQGSLPSDLG---FTLPNLERLNLGENQFTGPIPASISN 290 (809)
Q Consensus 217 ~l~~L~~L~L~~n~l~~~~~~~l~---~l~~L~~L~l~~n~l~~~~p~~~~---~~l~~L~~L~Ls~N~l~~~~p~~l~~ 290 (809)
.+++|++|++.+|.+.+..+..+. .+++|++|+++.|.+.+..+..+. ..+++|+.|++++|.++...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 356666666666666543333332 356777777777777654322222 13677888888888776543333333
Q ss_pred CCCCceEecCCCc
Q 040849 291 ASHLMRLTIPING 303 (809)
Q Consensus 291 l~~L~~L~l~~n~ 303 (809)
.- ...++++.++
T Consensus 330 al-g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL-PMKIDVSDSQ 341 (362)
T ss_dssp HC-CSEEECCSBC
T ss_pred Hc-CCEEEecCCc
Confidence 11 3456777665
No 404
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.90 E-value=2.3e-07 Score=100.36 Aligned_cols=103 Identities=18% Similarity=0.189 Sum_probs=64.0
Q ss_pred CccccCCCCCCeeeCCCccceecCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEcccccCcccCCccccCCC
Q 040849 387 PSGLRNLVNLERLLLEGNQFTGRIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDKNMLEGSIPSSLGKCQ 466 (809)
Q Consensus 387 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 466 (809)
...+....+|+.+.+..+ +.......|.++..|+.+.+..+ ++......|.++.+|+.+.+..+ +......+|.+++
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 445556667777776554 33355566777777888777665 55455667777777887777543 4445556777777
Q ss_pred CCcEEeCcCCcCccccCcchhcccCC
Q 040849 467 NLILLGLSNNNLTGTIPTEVIGLSSL 492 (809)
Q Consensus 467 ~L~~L~Ls~N~l~~~~p~~~~~l~~l 492 (809)
+|+.+++.++.++..-...|.++.+|
T Consensus 287 ~L~~i~l~~~~i~~I~~~aF~~c~~L 312 (379)
T 4h09_A 287 NLTKVVMDNSAIETLEPRVFMDCVKL 312 (379)
T ss_dssp TCCEEEECCTTCCEECTTTTTTCTTC
T ss_pred ccccccccccccceehhhhhcCCCCC
Confidence 77777776666553223333333444
No 405
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=98.86 E-value=1.5e-09 Score=122.68 Aligned_cols=82 Identities=17% Similarity=0.188 Sum_probs=59.2
Q ss_pred cccceeccCCceeEEEEEECCCCceeEEEEe----------------------------cCCCCcceeeEeeeeeccccC
Q 040849 707 SLENLIGAGSFGSVYKGILNHDDHETLVAVK----------------------------RSIRHRNLVKIITSCASVDFQ 758 (809)
Q Consensus 707 ~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK----------------------------~~l~H~niv~l~~~~~~~~~~ 758 (809)
...+.||+|+||+||+|+.... .+|+| ++++|||||++..++..
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~---- 410 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYLDF----DVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD---- 410 (540)
T ss_dssp ---------CCEEEEEEECSSC----EEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE----
T ss_pred CCCCEEeeCCCEEEEEEEECCC----eEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe----
Confidence 3457899999999999964432 67777 35789999965555543
Q ss_pred CCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 759 GNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 759 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++..|||||||++|+|.++++. +..|+.|+++||+|||
T Consensus 411 -~~~~~lVmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH 448 (540)
T 3en9_A 411 -LDNKRIMMSYINGKLAKDVIED------------NLDIAYKIGEIVGKLH 448 (540)
T ss_dssp -TTTTEEEEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHH
T ss_pred -CCccEEEEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHH
Confidence 4567999999999999999973 5579999999999998
No 406
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=98.55 E-value=6.7e-08 Score=99.56 Aligned_cols=91 Identities=12% Similarity=0.105 Sum_probs=66.7
Q ss_pred HHHHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEecC------------------------------------
Q 040849 696 YQNLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKRS------------------------------------ 739 (809)
Q Consensus 696 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK~~------------------------------------ 739 (809)
...+......|...+.||+|+||.||+|+. .. ++.||||..
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~--g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l 158 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYS-EK--FGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRAL 158 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEE-TT--TEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEe-CC--CCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHH
Confidence 344455556677889999999999999997 33 348999911
Q ss_pred --CCCcceeeEeeeeeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 740 --IRHRNLVKIITSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 740 --l~H~niv~l~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++ | +++.+++. .+..|+|||||++|+|.+ +.. .+...++.|+++||+|||
T Consensus 159 ~~l~--~-~~v~~~~~------~~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH 210 (282)
T 1zar_A 159 QKLQ--G-LAVPKVYA------WEGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFY 210 (282)
T ss_dssp HHTT--T-SSSCCEEE------EETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHH
T ss_pred Hhcc--C-CCcCeEEe------ccceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHH
Confidence 11 4 56666532 345699999999999998 531 124569999999999998
No 407
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.54 E-value=3.9e-08 Score=111.74 Aligned_cols=59 Identities=14% Similarity=0.046 Sum_probs=50.4
Q ss_pred CC-CCcceeeEeeeeeccccCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 739 SI-RHRNLVKIITSCASVDFQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 739 ~l-~H~niv~l~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++ +|+||+++++++.+ ++..|||||||+||+|.++|++. ..++.. +|+.||++||+|+|
T Consensus 297 ~~~~~~~i~~~~~~~ed-----~~~~yLVMEyv~G~~L~d~i~~~----~~l~~~---~I~~QIl~AL~ylH 356 (569)
T 4azs_A 297 QPPAGFDAPAVLAHGEN-----AQSGWLVMEKLPGRLLSDMLAAG----EEIDRE---KILGSLLRSLAALE 356 (569)
T ss_dssp SCCTTCCCCCEEEEEEC-----SSEEEEEEECCCSEEHHHHHHTT----CCCCHH---HHHHHHHHHHHHHH
T ss_pred hcCCCCCeeEEEEEEEE-----CCEEEEEEecCCCCcHHHHHHhC----CCCCHH---HHHHHHHHHHHHHH
Confidence 45 79999999999654 88999999999999999999854 346653 58999999999998
No 408
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.53 E-value=5.4e-09 Score=100.43 Aligned_cols=94 Identities=16% Similarity=0.112 Sum_probs=51.2
Q ss_pred cCccccCCCCccEEeCCCC-CCCcc----CCccccccccCCccccCCCcCccc----CCccccCCCcCcEEEcccCCCCC
Q 040849 91 LSPHIGNLSFLRVLDLKNN-SFRNE----IPQEIGYLFRLQFLWLDNNTFGGQ----IPDNISHCVNLESLRLGFNELVG 161 (809)
Q Consensus 91 ~~~~l~~l~~L~~LdLs~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 161 (809)
+...+...+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.+..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445666777888888887 77643 233344456666666666666532 22233444556666666665543
Q ss_pred C----CcccccCCCCCCEEEc--ccccCc
Q 040849 162 K----VPRKLGSLSKLRTLAV--HYNNLS 184 (809)
Q Consensus 162 ~----~p~~l~~l~~L~~L~L--s~N~l~ 184 (809)
. +...+...++|++|+| ++|.++
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2 2233444445555555 445554
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.51 E-value=2.4e-08 Score=100.68 Aligned_cols=79 Identities=23% Similarity=0.344 Sum_probs=47.6
Q ss_pred CCCCCCEEEcccccccc--ccCccccCCCCCCEEeCcCCccccccchhhcCCC--CCCEEeCCCCCccccccc-------
Q 040849 513 ILKNLGVLDVSENKLSG--EIPNSLGSCVRLEQLGMNGNFFQGNIPSSFSSLR--GIENLDLSRNNLSGRIPK------- 581 (809)
Q Consensus 513 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~LdLs~N~l~~~~p~------- 581 (809)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|.
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 45566666666666665 3445566666677777777766654 2233333 677777777777665542
Q ss_pred ccccCCCCCeEE
Q 040849 582 YFENFLFLQNLN 593 (809)
Q Consensus 582 ~~~~l~~L~~l~ 593 (809)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 355666666664
No 410
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.42 E-value=5.7e-08 Score=93.19 Aligned_cols=120 Identities=14% Similarity=0.192 Sum_probs=70.5
Q ss_pred ccccCCCCCcEEeCcCC-cCccccCcchhcccCCceEEEccCCcCcccCCCCccCCCCCCEEEccccccccc----cCcc
Q 040849 460 SSLGKCQNLILLGLSNN-NLTGTIPTEVIGLSSLSIYLDLSQNQLNGTLPSNFGILKNLGVLDVSENKLSGE----IPNS 534 (809)
Q Consensus 460 ~~l~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 534 (809)
..+...++|++|+|++| .+...-...+ ...+...++|++|||++|++... +...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l---------------------~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~ 88 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKAC---------------------AEALKTNTYVKKFSIVGTRSNDPVAFALAEM 88 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHH---------------------HHHHTTCCSCCEEECTTSCCCHHHHHHHHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHH---------------------HHHHHhCCCcCEEECcCCCCChHHHHHHHHH
Confidence 44566777888888877 7753211111 11223345566666666666532 2333
Q ss_pred ccCCCCCCEEeCcCCccccc----cchhhcCCCCCCEEeC--CCCCcccc----cccccccCCCCCeEEccCCccc
Q 040849 535 LGSCVRLEQLGMNGNFFQGN----IPSSFSSLRGIENLDL--SRNNLSGR----IPKYFENFLFLQNLNLSFNHFE 600 (809)
Q Consensus 535 ~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~LdL--s~N~l~~~----~p~~~~~l~~L~~l~ls~N~l~ 600 (809)
+...+.|++|+|++|.|.+. +...+...+.|++|+| ++|.+... +...+...++|++|++++|.+.
T Consensus 89 L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 89 LKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 44556677777777777643 3455666677777777 66777643 2344455577777777777764
No 411
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=98.38 E-value=1.2e-07 Score=103.66 Aligned_cols=105 Identities=13% Similarity=0.118 Sum_probs=67.5
Q ss_pred hcccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------------cCCCC-cceeeE---------
Q 040849 702 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------------RSIRH-RNLVKI--------- 748 (809)
Q Consensus 702 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------------~~l~H-~niv~l--------- 748 (809)
....|...+.||+|+||+||+|+....+. .|||| +.++| +|....
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~--~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~ 153 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGE--SFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFP 153 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCC--EEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCC
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCC--ceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccc
Confidence 34457888999999999999999765444 89999 23444 211110
Q ss_pred eeeeeccc-------cCC-----CceEEEEEeccCCCChhhhhcCC---CCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 749 ITSCASVD-------FQG-----NDFKALVYEFMVNGSLEEWLHPK---PEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 749 ~~~~~~~~-------~~~-----~~~~~lv~Ey~~~GsL~~~l~~~---~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
...+.... ..+ ....+++|+++ +|+|.++++.. ......++|..+..|+.||++||+|||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 228 (413)
T 3dzo_A 154 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH 228 (413)
T ss_dssp CEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 01100000 000 12356777765 68999988411 112345889999999999999999998
No 412
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.24 E-value=3.2e-07 Score=97.22 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=66.8
Q ss_pred HHHHhcccccccceeccCCceeEEEEEECCCCceeEEEEe---------cC-------------------------CCCc
Q 040849 698 NLFKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK---------RS-------------------------IRHR 743 (809)
Q Consensus 698 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------~~-------------------------l~H~ 743 (809)
.+.....-|.+.+.||+|+||.||+|...+ ++.|||| +. ..|+
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~---G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~ 165 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEK---GKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFA 165 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTT---CCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCC---CCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 334444458899999999999999999543 3489999 00 1277
Q ss_pred ceeeEeeeeeccc-cCCCceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 744 NLVKIITSCASVD-FQGNDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 744 niv~l~~~~~~~~-~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
|+++++....... .-.....+|||||++|++|.++.. . +....++.|++.||.|||
T Consensus 166 nL~rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~--------~--~~~~~l~~qll~~l~~lH 222 (397)
T 4gyi_A 166 FMKALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSS--------V--PDPASLYADLIALILRLA 222 (397)
T ss_dssp HHHHHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCC--------C--SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCeeeeccCceEEEEecCCccHhhhcc--------c--HHHHHHHHHHHHHHHHHH
Confidence 8887765432210 000111369999999999876542 1 124568899999999998
No 413
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=98.06 E-value=1.1e-06 Score=89.09 Aligned_cols=87 Identities=21% Similarity=0.137 Sum_probs=58.4
Q ss_pred cccccceeccCCceeEEEEEECCCCceeE--EEEec------C-------------------------------------
Q 040849 705 GFSLENLIGAGSFGSVYKGILNHDDHETL--VAVKR------S------------------------------------- 739 (809)
Q Consensus 705 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~--vavK~------~------------------------------------- 739 (809)
-|...+.||+|+||.||+|.....+. . ||||. .
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~--~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 125 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGK--PVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLE 125 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTE--EEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCc--EeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHH
Confidence 36678899999999999999733334 6 99991 1
Q ss_pred -CCCcce--eeEeeeeeccccCCCceEEEEEeccCC-C----ChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 740 -IRHRNL--VKIITSCASVDFQGNDFKALVYEFMVN-G----SLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 740 -l~H~ni--v~l~~~~~~~~~~~~~~~~lv~Ey~~~-G----sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++|+++ .+.+++ ...+|||||+.+ | +|.++... .++.++..++.|+++||+|||
T Consensus 126 ~l~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH 187 (258)
T 1zth_A 126 RAKEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLY 187 (258)
T ss_dssp HHHHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHH
Confidence 112322 122221 235899999953 4 66665431 234467889999999999998
No 414
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.85 E-value=5.4e-06 Score=77.24 Aligned_cols=82 Identities=5% Similarity=0.065 Sum_probs=41.2
Q ss_pred cCcEEEcccCCCCCCCcccccCCCCCCEEEccccc-CcccCCccCCCC----CCCCEEEcccCc-ccccCcccccCCCCc
Q 040849 148 NLESLRLGFNELVGKVPRKLGSLSKLRTLAVHYNN-LSGQIPSSFGNL----SSLEVLSASANQ-FVGQIPKTLSQLKRM 221 (809)
Q Consensus 148 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~l~~l~~L 221 (809)
.|++||++++.++...-..+.++++|++|+|++|. +++.--..++.+ ++|++|+|++|. ++..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555444333444555556666665553 443333334433 246666666653 544333344555556
Q ss_pred cEEEeecC
Q 040849 222 RFIGFGVN 229 (809)
Q Consensus 222 ~~L~L~~n 229 (809)
++|+++++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66655554
No 415
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.72 E-value=1.5e-05 Score=74.18 Aligned_cols=83 Identities=11% Similarity=0.115 Sum_probs=53.1
Q ss_pred CCCCEEEccccccccccCccccCCCCCCEEeCcCCc-cccccchhhcCC----CCCCEEeCCCCC-cccccccccccCCC
Q 040849 515 KNLGVLDVSENKLSGEIPNSLGSCVRLEQLGMNGNF-FQGNIPSSFSSL----RGIENLDLSRNN-LSGRIPKYFENFLF 588 (809)
Q Consensus 515 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~LdLs~N~-l~~~~p~~~~~l~~ 588 (809)
..|+.||++++.++..--..+.++++|+.|+|+++. +++.--..+..+ ++|+.|||++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356777777777665555566677777777777764 655444445543 357777777764 66444445666777
Q ss_pred CCeEEccCC
Q 040849 589 LQNLNLSFN 597 (809)
Q Consensus 589 L~~l~ls~N 597 (809)
|++|++++.
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 777777765
No 416
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.98 E-value=6.4e-05 Score=71.39 Aligned_cols=66 Identities=15% Similarity=0.106 Sum_probs=31.4
Q ss_pred ccCCCCccEEeCCCC-CCCcc----CCccccccccCCccccCCCcCcccC----CccccCCCcCcEEEcccCCCC
Q 040849 95 IGNLSFLRVLDLKNN-SFRNE----IPQEIGYLFRLQFLWLDNNTFGGQI----PDNISHCVNLESLRLGFNELV 160 (809)
Q Consensus 95 l~~l~~L~~LdLs~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~ 160 (809)
+.+-+.|+.|+|++| .|... +-..+..-+.|+.|+|++|.|...- .+.+..-+.|++|+|++|.|.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 344556777777764 55421 2233344455555555555554221 112223344455555555443
No 417
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.92 E-value=0.0013 Score=58.20 Aligned_cols=57 Identities=19% Similarity=0.303 Sum_probs=34.6
Q ss_pred EEeCcCCccc-cccchhhcCCCCCCEEeCCCCCcccccccccccCCCCCeEEccCCcccc
Q 040849 543 QLGMNGNFFQ-GNIPSSFSSLRGIENLDLSRNNLSGRIPKYFENFLFLQNLNLSFNHFEG 601 (809)
Q Consensus 543 ~L~Ls~N~l~-~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 601 (809)
.++.+++.++ ..+|..+. ++|+.|||++|+|+...+..|..+++|++|+|++|++..
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 4555555554 23333222 246677777777776666667777777777777776654
No 418
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=96.85 E-value=0.002 Score=65.05 Aligned_cols=91 Identities=13% Similarity=0.019 Sum_probs=66.5
Q ss_pred HhcccccccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCC-CCcceeeEeeeeeccccCC
Q 040849 701 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSI-RHRNLVKIITSCASVDFQG 759 (809)
Q Consensus 701 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l-~H~niv~l~~~~~~~~~~~ 759 (809)
...+.|+.....+.|+.+.||++... +. .+++| +.+ +|..+.++++++..
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~--~~--~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~----- 81 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE--NE--NLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH----- 81 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS--SC--EEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-----
T ss_pred HHhccceeEeeccCCCCCeEEEEECC--CC--cEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-----
Confidence 34456888888898999999999843 22 78888 112 25667778887654
Q ss_pred CceEEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 760 NDFKALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 760 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..|+||||++|.+|.+.+.. ..+...++.+++++++.||
T Consensus 82 ~~~~~lv~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH 122 (263)
T 3tm0_A 82 DGWSNLLMSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFH 122 (263)
T ss_dssp TTEEEEEEECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHh
Confidence 5678999999999999876421 1123467889999999888
No 419
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.82 E-value=0.00067 Score=64.37 Aligned_cols=84 Identities=15% Similarity=0.198 Sum_probs=46.3
Q ss_pred CCCCEEEcccccccccc----CccccCCCCCCEEeCcCCccccc----cchhhcCCCCCCEEeCCCC---Cccc----cc
Q 040849 515 KNLGVLDVSENKLSGEI----PNSLGSCVRLEQLGMNGNFFQGN----IPSSFSSLRGIENLDLSRN---NLSG----RI 579 (809)
Q Consensus 515 ~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~LdLs~N---~l~~----~~ 579 (809)
+.|+.|+|++|+|.... ...+..-+.|+.|+|++|.|.+. +-+++..-+.|+.|+|++| .+.. .+
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~i 149 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDM 149 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHH
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHH
Confidence 45566666666655322 22333445677777777776643 2334444566777777754 2332 23
Q ss_pred ccccccCCCCCeEEccCCc
Q 040849 580 PKYFENFLFLQNLNLSFNH 598 (809)
Q Consensus 580 p~~~~~l~~L~~l~ls~N~ 598 (809)
-..+..-+.|+.|+++.|.
T Consensus 150 a~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 150 MMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHCSSCCEEECCCCC
T ss_pred HHHHHhCCCcCeEeccCCC
Confidence 3445556677777776553
No 420
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.69 E-value=0.0026 Score=56.29 Aligned_cols=37 Identities=19% Similarity=0.272 Sum_probs=22.2
Q ss_pred CCCEEeCcCCccccccchhhcCCCCCCEEeCCCCCcc
Q 040849 540 RLEQLGMNGNFFQGNIPSSFSSLRGIENLDLSRNNLS 576 (809)
Q Consensus 540 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~ 576 (809)
+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555666666666555555666666666666666553
No 421
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=95.32 E-value=0.022 Score=57.07 Aligned_cols=86 Identities=13% Similarity=0.039 Sum_probs=54.8
Q ss_pred ccccccceeccCCceeEEEEEECCCCceeEEEEe-----------------cCCCCcc--eeeEeeeeeccccCCCceEE
Q 040849 704 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------RSIRHRN--LVKIITSCASVDFQGNDFKA 764 (809)
Q Consensus 704 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------~~l~H~n--iv~l~~~~~~~~~~~~~~~~ 764 (809)
.++......+.|..+.||++...++ . .+++| +.+++.+ +.+++++... ++..+
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g-~--~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~-----~~~~~ 91 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGR-P--VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTE-----AGRDW 91 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTS-C--CEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-----SSCEE
T ss_pred CCCceEecccCCCCceEEEEecCCC-C--eEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccC-----CCCCE
Confidence 3444433334566799999975433 2 58888 1222333 4457776543 45689
Q ss_pred EEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 765 LVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 765 lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
+||||++|.++. ... .+ ...++.++++.++.||
T Consensus 92 ~v~e~i~G~~l~--~~~-------~~---~~~~~~~l~~~l~~lh 124 (264)
T 1nd4_A 92 LLLGEVPGQDLL--SSH-------LA---PAEKVSIMADAMRRLH 124 (264)
T ss_dssp EEEECCSSEETT--TSC-------CC---HHHHHHHHHHHHHHHT
T ss_pred EEEEecCCcccC--cCc-------CC---HhHHHHHHHHHHHHHh
Confidence 999999999884 221 12 2357888999999888
No 422
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=95.00 E-value=0.046 Score=57.82 Aligned_cols=90 Identities=11% Similarity=0.120 Sum_probs=62.3
Q ss_pred ccceeccCCceeEEEEEECCCCceeEEEEecC-----------------------CC--CcceeeEeeeeeccccCCCce
Q 040849 708 LENLIGAGSFGSVYKGILNHDDHETLVAVKRS-----------------------IR--HRNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 708 ~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK~~-----------------------l~--H~niv~l~~~~~~~~~~~~~~ 762 (809)
..+.++.|.++.||+.+..++ .+++|.. ++ +..+.++++++.... ..+.
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~~----~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~--~~g~ 115 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPGQ----TYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES--VIGR 115 (359)
T ss_dssp EEEECCC-CCSCEEEEECSSC----EEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT--TTSS
T ss_pred eEEEcCCcccceEEEEEECCc----eEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC--ccCC
Confidence 357789999999999985432 4566511 12 345777787765411 1145
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.|+||||++|..+.+... ..++..++..++.++++.|+.||
T Consensus 116 ~~~vme~v~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH 156 (359)
T 3dxp_A 116 AFYIMEFVSGRVLWDQSL------PGMSPAERTAIYDEMNRVIAAMH 156 (359)
T ss_dssp CEEEEECCCCBCCCCTTC------TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCeecCCCcc------ccCCHHHHHHHHHHHHHHHHHHh
Confidence 799999999988754221 23678889999999999999998
No 423
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=92.73 E-value=0.13 Score=52.38 Aligned_cols=57 Identities=12% Similarity=0.035 Sum_probs=40.5
Q ss_pred cccceeccCCceeEEEEEECCCCceeEEEEe--------------------cCCCCc---ceeeEeeeeeccccCCCceE
Q 040849 707 SLENLIGAGSFGSVYKGILNHDDHETLVAVK--------------------RSIRHR---NLVKIITSCASVDFQGNDFK 763 (809)
Q Consensus 707 ~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK--------------------~~l~H~---niv~l~~~~~~~~~~~~~~~ 763 (809)
...+.++.|.++.||+++..++ . .++|| +.++|. .+.+++++. ..
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG-~--~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~ 85 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADG-T--PLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DR 85 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTS-C--EEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TT
T ss_pred cceeeeCCcchhheEEEEeCCC-C--eEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------Cc
Confidence 4457899999999999987654 3 68888 223343 456666652 25
Q ss_pred EEEEeccCCCCh
Q 040849 764 ALVYEFMVNGSL 775 (809)
Q Consensus 764 ~lv~Ey~~~GsL 775 (809)
++||||++++.+
T Consensus 86 ~lvme~l~g~~~ 97 (288)
T 3d1u_A 86 TLAMEWVDERPP 97 (288)
T ss_dssp EEEEECCCCCCC
T ss_pred EEEEEecccCCC
Confidence 899999998764
No 424
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=86.84 E-value=0.78 Score=47.25 Aligned_cols=83 Identities=12% Similarity=0.140 Sum_probs=57.4
Q ss_pred cccccceeccCCceeEEEEEECCCCceeEEEEe------------------cCCCC----cceeeEeeeeeccccCCCce
Q 040849 705 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVK------------------RSIRH----RNLVKIITSCASVDFQGNDF 762 (809)
Q Consensus 705 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------~~l~H----~niv~l~~~~~~~~~~~~~~ 762 (809)
.+...+.++.|....||+. ++ .+++| +.+.+ ..+.+++++ +.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v---g~----~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC---NE----QYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE---TT----TEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred ceEEEEeCCCCCCceEEEE---CC----EEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence 4555678999999999988 22 46777 12333 122333333 23
Q ss_pred EEEEEeccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 763 KALVYEFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 763 ~~lv~Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.|+||||++|.++.+... ..++..++..++.++++.++.||
T Consensus 102 ~~lvme~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH 142 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQY------HKLSEKEKDALAYDEATFLKELH 142 (320)
T ss_dssp SCEEEECCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEeecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHh
Confidence 589999999998874432 12677788899999999999887
No 425
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=84.43 E-value=1.6 Score=43.53 Aligned_cols=84 Identities=17% Similarity=0.038 Sum_probs=53.0
Q ss_pred eeccCCce-eEEEEEECCCCceeEEEEe-----------------cCC-CCcceeeEeeeeeccccCCCceEEEEEeccC
Q 040849 711 LIGAGSFG-SVYKGILNHDDHETLVAVK-----------------RSI-RHRNLVKIITSCASVDFQGNDFKALVYEFMV 771 (809)
Q Consensus 711 ~ig~G~~g-~Vy~~~~~~~~~~~~vavK-----------------~~l-~H~niv~l~~~~~~~~~~~~~~~~lv~Ey~~ 771 (809)
.+..|..| .||+.....++. .+.+| +.+ .+--+-++++++.. ++..|+||||++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~--~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-----~~~~~lvme~l~ 103 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAP--ELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRT-----PDDAWLLTTAIP 103 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCC--CEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-----TTEEEEEEECCC
T ss_pred EccCCCcCCeEEEEEecCCCe--EEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEEEE-----CCeEEEEEEeeC
Confidence 44555555 699887544433 67787 111 12224456666654 567899999999
Q ss_pred CCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 772 NGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 772 ~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
|.++.+..... ..+...++.++++.|+-||
T Consensus 104 G~~~~~~~~~~--------~~~~~~~~~~l~~~L~~Lh 133 (272)
T 4gkh_A 104 GKTAFQVLEEY--------PDSGENIVDALAVFLRRLH 133 (272)
T ss_dssp SEEHHHHHHHC--------GGGHHHHHHHHHHHHHHHH
T ss_pred CccccccccCC--------HHHHHHHHHHHHHHHHHhc
Confidence 98888765421 1234557788888887776
No 426
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=84.03 E-value=0.62 Score=31.54 Aligned_cols=27 Identities=19% Similarity=0.142 Sum_probs=11.2
Q ss_pred EEehhhHHHHHHHHHHhhhhhhhccCC
Q 040849 650 LIIPIVTGILLVTGMSCLIITSWRSKS 676 (809)
Q Consensus 650 i~v~~~~~~~~~~~~~~~~~~~~r~~~ 676 (809)
++++++++++++++++..+++++|+|+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 444444444443333333344444433
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=82.47 E-value=2.5 Score=43.18 Aligned_cols=60 Identities=13% Similarity=0.057 Sum_probs=41.3
Q ss_pred cccceeccCCceeEEEEEECCCCceeEEEEe-----------------cCC---CCcceeeEeeeeeccccCCCceEEEE
Q 040849 707 SLENLIGAGSFGSVYKGILNHDDHETLVAVK-----------------RSI---RHRNLVKIITSCASVDFQGNDFKALV 766 (809)
Q Consensus 707 ~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK-----------------~~l---~H~niv~l~~~~~~~~~~~~~~~~lv 766 (809)
...+.|+.|.+..+|+.... +. .+.+| +.+ ....+.+.++++.. ++..++|
T Consensus 39 ~~~~~l~gG~~n~~y~v~~~--~~--~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-----~g~~~lv 109 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLINDE--VQ--TVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNS-----QGHSFLL 109 (312)
T ss_dssp CEEEEECCSSSSEEEEEESS--SC--EEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-----SSEEEEE
T ss_pred eeeEEeCCccceeeeEEEEC--CC--eEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-----CCceEEE
Confidence 34567899999999999842 22 67788 111 12446666766543 4678999
Q ss_pred EeccCCCCh
Q 040849 767 YEFMVNGSL 775 (809)
Q Consensus 767 ~Ey~~~GsL 775 (809)
|||+++..+
T Consensus 110 me~l~G~~~ 118 (312)
T 3jr1_A 110 LEALNKSKN 118 (312)
T ss_dssp EECCCCCCC
T ss_pred EEeccCCCC
Confidence 999998754
No 428
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=78.87 E-value=4.2 Score=41.37 Aligned_cols=84 Identities=11% Similarity=-0.042 Sum_probs=57.2
Q ss_pred cceeccCCceeEEEEEECCCCceeEEEEe------------------cCCCCc---ceeeEeeeeeccccCCCceEEEEE
Q 040849 709 ENLIGAGSFGSVYKGILNHDDHETLVAVK------------------RSIRHR---NLVKIITSCASVDFQGNDFKALVY 767 (809)
Q Consensus 709 ~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------~~l~H~---niv~l~~~~~~~~~~~~~~~~lv~ 767 (809)
.+.++.|....||+. ++ .+.+| +.+++. -+-+.+.++.. ..+..++||
T Consensus 24 v~~l~~G~~n~v~~v---g~----~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~----~~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV---NG----DWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR----SDGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE---TT----TEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC----TTSCEEEEE
T ss_pred eeecCCCcceeEEEE---CC----EEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc----CCCceEEEE
Confidence 456788888899987 22 36666 223321 24445555432 144578999
Q ss_pred eccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 768 EFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 768 Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
||++|..+.+.... .++..++..++.++++.|+.||
T Consensus 93 e~i~G~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH 128 (306)
T 3tdw_A 93 RKVQGQILGEDGMA------VLPDDAKDRLALQLAEFMNELS 128 (306)
T ss_dssp ECCCSEECHHHHHT------TSCHHHHHHHHHHHHHHHHHHH
T ss_pred eccCCeECchhhhh------hCCHHHHHHHHHHHHHHHHHHh
Confidence 99999888764331 2567788899999999999888
No 429
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=77.39 E-value=0.81 Score=30.89 Aligned_cols=26 Identities=12% Similarity=0.243 Sum_probs=10.4
Q ss_pred EEehhhHHHHHHHHHHhhhhhhhccC
Q 040849 650 LIIPIVTGILLVTGMSCLIITSWRSK 675 (809)
Q Consensus 650 i~v~~~~~~~~~~~~~~~~~~~~r~~ 675 (809)
++.+++++++++++++..+++++|+|
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 34444443444333333333344433
No 430
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=76.99 E-value=1.8 Score=43.96 Aligned_cols=86 Identities=16% Similarity=0.104 Sum_probs=55.6
Q ss_pred cceeccCCceeEEEEEECCCCceeEEEEe------------------cCC-CCcc--eeeEeeeeeccccCCCceEEEEE
Q 040849 709 ENLIGAGSFGSVYKGILNHDDHETLVAVK------------------RSI-RHRN--LVKIITSCASVDFQGNDFKALVY 767 (809)
Q Consensus 709 ~~~ig~G~~g~Vy~~~~~~~~~~~~vavK------------------~~l-~H~n--iv~l~~~~~~~~~~~~~~~~lv~ 767 (809)
.+.++.|....||+.. + .+++| +.+ .+.. +.+.++.+.. .......|+||
T Consensus 25 i~~~~~G~~n~v~~v~---~----~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~--~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN---R----DFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP--SETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST---T----SEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC--CSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC---C----EEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCC--CCCCCcceEEE
Confidence 4568999999999864 2 36666 122 2222 2233333221 00012358999
Q ss_pred eccCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 768 EFMVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 768 Ey~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
||++|.++.+... ..++..++..++.++++.++.||
T Consensus 96 ~~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH 131 (304)
T 3sg8_A 96 TKIKGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELH 131 (304)
T ss_dssp ECCCCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHH
Confidence 9999988875433 12678888999999999999887
No 431
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=74.73 E-value=3.5 Score=43.15 Aligned_cols=84 Identities=10% Similarity=0.051 Sum_probs=51.4
Q ss_pred cccceeccCCceeEEEEEECCCCceeEEEEe---------------cCCCCc--ceeeEeeeeeccccCCCceEEEEEec
Q 040849 707 SLENLIGAGSFGSVYKGILNHDDHETLVAVK---------------RSIRHR--NLVKIITSCASVDFQGNDFKALVYEF 769 (809)
Q Consensus 707 ~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------~~l~H~--niv~l~~~~~~~~~~~~~~~~lv~Ey 769 (809)
...+.++.|....||+.+.. +. .+.+| +.+... .+-++++++.. +.+..|+||||
T Consensus 44 ~~i~~l~gG~~n~~y~v~~~--g~--~~vlK~~~~~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~----~~g~~~lv~e~ 115 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDVG--GR--GYVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEF----SESLTYCISRR 115 (362)
T ss_dssp EEEEEEEECSSEEEEEEEET--TE--EEEEEEESCCHHHHHHHHHHHHHCCSSSCCCCEEEEEES----SSSCEEEEEEC
T ss_pred ceEEECCCCCcceEEEEEEC--Cc--EEEEEeCCchhhHHHHHHHHHHHHhcCCCCceEEEeccC----CCCCeEEEEEe
Confidence 34567899999999998843 23 67887 112211 13344555432 12568999999
Q ss_pred cCCCChhhhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 770 MVNGSLEEWLHPKPEAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 770 ~~~GsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
++|.++.+. +..++..++.++++.|+-||
T Consensus 116 l~G~~l~~l-----------~~~~~~~~~~~lg~~La~LH 144 (362)
T 3ovc_A 116 AQGVTLQDL-----------PETELPAVLQPVAEAMDAIA 144 (362)
T ss_dssp CCSEETTTS-----------CGGGSGGGHHHHHHHHHHHH
T ss_pred cCCCCcccC-----------CHHHHHHHHHHHHHHHHHHh
Confidence 998766421 22234446677777777666
No 432
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=64.80 E-value=8.2 Score=40.76 Aligned_cols=27 Identities=22% Similarity=0.313 Sum_probs=19.1
Q ss_pred cceeccCCceeEEEEEECCCCceeEEEEe
Q 040849 709 ENLIGAGSFGSVYKGILNHDDHETLVAVK 737 (809)
Q Consensus 709 ~~~ig~G~~g~Vy~~~~~~~~~~~~vavK 737 (809)
.+.+|.|.++.||+++...++ +.|+||
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~--~~~vvK 61 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHD--RALIIK 61 (397)
T ss_dssp EEECCSSSSEEEEEEEC------CEEEEE
T ss_pred EEECCCCceEEEEEEEECCCC--cEEEEE
Confidence 467899999999999754332 368888
No 433
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=60.46 E-value=15 Score=38.03 Aligned_cols=99 Identities=7% Similarity=-0.017 Sum_probs=57.5
Q ss_pred ccee-ccCCceeEEEEEEC---CCC-ceeEEEEec----C---C--C---------------C--cceeeEeeeeecccc
Q 040849 709 ENLI-GAGSFGSVYKGILN---HDD-HETLVAVKR----S---I--R---------------H--RNLVKIITSCASVDF 757 (809)
Q Consensus 709 ~~~i-g~G~~g~Vy~~~~~---~~~-~~~~vavK~----~---l--~---------------H--~niv~l~~~~~~~~~ 757 (809)
.+.+ +.|....+|+.... ++. .++.+.+|. . . . + -.+.++++++.....
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4667 88889999988753 110 133577771 1 1 0 1 124455555432100
Q ss_pred CCCceEEEEEeccCCCChhhhhcCCC--CCCCCCCHHHHHHHHHHHHHHhhhcC
Q 040849 758 QGNDFKALVYEFMVNGSLEEWLHPKP--EAPRNSNLLQRLSIAVDVASALDYLH 809 (809)
Q Consensus 758 ~~~~~~~lv~Ey~~~GsL~~~l~~~~--~~~~~~~~~~~~~i~~~ia~gl~yLH 809 (809)
.+..|+||||++|..+.+.+...- .....++..++..++.++++.|+-||
T Consensus 105 --~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH 156 (357)
T 3ats_A 105 --LGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLH 156 (357)
T ss_dssp --TSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHT
T ss_pred --cCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 134689999999988765431100 00012566677788999999998888
No 434
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=54.33 E-value=24 Score=35.15 Aligned_cols=29 Identities=17% Similarity=0.062 Sum_probs=23.6
Q ss_pred ccccceeccCCceeEEEEEECCCCceeEEEEe
Q 040849 706 FSLENLIGAGSFGSVYKGILNHDDHETLVAVK 737 (809)
Q Consensus 706 ~~~~~~ig~G~~g~Vy~~~~~~~~~~~~vavK 737 (809)
+...+.+|.|..+.||+.+..++ + .|.+|
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG-~--~~~vK 45 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADG-T--PLFVK 45 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTS-C--EEEEE
T ss_pred eEEEEecCCCCCeEEEEEEECCC-C--EEEEE
Confidence 44567889999999999998765 3 68888
No 435
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=41.85 E-value=8.2 Score=25.56 Aligned_cols=10 Identities=30% Similarity=0.554 Sum_probs=3.8
Q ss_pred EehhhHHHHH
Q 040849 651 IIPIVTGILL 660 (809)
Q Consensus 651 ~v~~~~~~~~ 660 (809)
++++++++++
T Consensus 16 ~~~vv~Gv~l 25 (41)
T 2k9y_A 16 IGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHH
T ss_pred EeehhHHHHH
Confidence 3333333333
No 436
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=40.94 E-value=33 Score=34.78 Aligned_cols=59 Identities=15% Similarity=0.251 Sum_probs=30.9
Q ss_pred ceeccCCceeEEEEEECCCCceeEEEEe---------------------cCCCCcceeeEe-eeeeccccCCCceEEEEE
Q 040849 710 NLIGAGSFGSVYKGILNHDDHETLVAVK---------------------RSIRHRNLVKII-TSCASVDFQGNDFKALVY 767 (809)
Q Consensus 710 ~~ig~G~~g~Vy~~~~~~~~~~~~vavK---------------------~~l~H~niv~l~-~~~~~~~~~~~~~~~lv~ 767 (809)
+.++.|..+.||+....++ .+++| ..+..|.++.-. |... ...++..++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~----~~vlk~~~~~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~---~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG----AVCLKRIHRPEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLY---SKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE----EEEEEEECSCHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSC---EEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC----CEEEEecCCCHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEE---EEECCEEEEEE
Confidence 4566677899999985432 47787 122233333211 1000 01145679999
Q ss_pred eccCCCCh
Q 040849 768 EFMVNGSL 775 (809)
Q Consensus 768 Ey~~~GsL 775 (809)
||++|..+
T Consensus 111 ~~i~G~~~ 118 (346)
T 2q83_A 111 DWIEGRPF 118 (346)
T ss_dssp ECCCCBCC
T ss_pred EeecCccC
Confidence 99998665
No 437
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=40.21 E-value=3.5 Score=44.78 Aligned_cols=41 Identities=10% Similarity=0.053 Sum_probs=16.4
Q ss_pred ccceeccCCceeEEEEEECCCCceeEEEE------e----------------------cCCCCcceeeEeeeee
Q 040849 708 LENLIGAGSFGSVYKGILNHDDHETLVAV------K----------------------RSIRHRNLVKIITSCA 753 (809)
Q Consensus 708 ~~~~ig~G~~g~Vy~~~~~~~~~~~~vav------K----------------------~~l~H~niv~l~~~~~ 753 (809)
..+.+| ||.||+|.+..+.. .||| | +..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~--~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHM--PVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------C--CBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCC--chhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345666 99999999865323 5677 4 2357999999988754
No 438
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=36.84 E-value=65 Score=26.09 Aligned_cols=42 Identities=12% Similarity=-0.037 Sum_probs=20.7
Q ss_pred cCCccccCCCCCCEEEeeCCeeecccCcCCcCCCCccEEEccc
Q 040849 409 RIPGSIGDLHKLQRLGLQGNKFLGEIPSSIGNLTLLITLSFDK 451 (809)
Q Consensus 409 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 451 (809)
+-..+|.+|.+|+.+.|-.+ ++..-...|.+|.+|+.+.+..
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33445555555555555543 3333344455555555555543
No 439
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=36.64 E-value=59 Score=26.38 Aligned_cols=38 Identities=21% Similarity=0.149 Sum_probs=15.3
Q ss_pred CccccccccCCccccCCCcCcccCCccccCCCcCcEEEc
Q 040849 116 PQEIGYLFRLQFLWLDNNTFGGQIPDNISHCVNLESLRL 154 (809)
Q Consensus 116 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 154 (809)
..+|.+++.|+.+.+-.+ ++.+-..+|.++.+|+.+.+
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 334444444444444332 22222333444444444444
No 440
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=25.60 E-value=47 Score=21.55 Aligned_cols=6 Identities=17% Similarity=0.107 Sum_probs=2.4
Q ss_pred hhhhcc
Q 040849 669 ITSWRS 674 (809)
Q Consensus 669 ~~~~r~ 674 (809)
++++||
T Consensus 32 ~~~~rr 37 (38)
T 2k1k_A 32 VFRSRR 37 (38)
T ss_dssp HHHHCC
T ss_pred HHHeec
Confidence 344443
No 441
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=25.28 E-value=18 Score=19.51 Aligned_cols=9 Identities=33% Similarity=1.228 Sum_probs=7.2
Q ss_pred CCCcccccc
Q 040849 61 HFCQWKGVT 69 (809)
Q Consensus 61 ~~c~w~gv~ 69 (809)
.-|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 479999975
Done!