Query 040855
Match_columns 205
No_of_seqs 132 out of 1923
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 12:30:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040855.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040855hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158 Cytochrome P450 CYP3/C 100.0 2.2E-51 4.7E-56 345.9 18.0 194 1-198 302-499 (499)
2 KOG0156 Cytochrome P450 CYP2 s 100.0 7E-51 1.5E-55 345.7 18.3 195 1-198 294-488 (489)
3 PLN02394 trans-cinnamate 4-mon 100.0 2.8E-49 6.2E-54 340.3 19.4 198 1-198 301-502 (503)
4 PLN02971 tryptophan N-hydroxyl 100.0 2.8E-49 6.1E-54 343.0 19.2 202 1-204 335-539 (543)
5 PTZ00404 cytochrome P450; Prov 100.0 1.1E-48 2.3E-53 335.2 18.8 191 1-197 291-482 (482)
6 PLN03234 cytochrome P450 83B1; 100.0 1.7E-48 3.6E-53 335.3 18.8 197 1-197 296-498 (499)
7 KOG0157 Cytochrome P450 CYP4/C 100.0 3.1E-48 6.8E-53 332.7 18.4 196 1-199 299-497 (497)
8 PLN00110 flavonoid 3',5'-hydro 100.0 6.5E-48 1.4E-52 331.8 19.4 199 1-199 297-498 (504)
9 PLN02183 ferulate 5-hydroxylas 100.0 4E-48 8.6E-53 334.1 18.0 196 1-197 312-511 (516)
10 PLN00168 Cytochrome P450; Prov 100.0 8.1E-48 1.8E-52 332.4 19.8 199 1-199 314-518 (519)
11 PLN02169 fatty acid (omega-1)- 100.0 5.7E-48 1.2E-52 331.9 18.7 189 1-197 309-499 (500)
12 PLN03112 cytochrome P450 famil 100.0 1E-47 2.3E-52 331.4 19.7 203 1-204 304-513 (514)
13 PLN02966 cytochrome P450 83A1 100.0 1.5E-47 3.3E-52 329.6 19.3 198 1-200 297-500 (502)
14 PLN02290 cytokinin trans-hydro 100.0 3.8E-47 8.2E-52 328.1 17.9 191 1-198 324-515 (516)
15 PLN03195 fatty acid omega-hydr 100.0 3.6E-47 7.8E-52 328.2 17.6 196 1-198 300-516 (516)
16 PLN02687 flavonoid 3'-monooxyg 100.0 8.2E-47 1.8E-51 326.0 19.4 198 1-198 305-509 (517)
17 PF00067 p450: Cytochrome P450 100.0 1.1E-47 2.4E-52 323.2 13.6 192 1-193 270-462 (463)
18 PLN02426 cytochrome P450, fami 100.0 8.9E-47 1.9E-51 324.4 19.1 198 1-199 301-501 (502)
19 PLN02738 carotene beta-ring hy 100.0 1.2E-46 2.6E-51 330.1 20.0 198 1-201 399-598 (633)
20 PLN02655 ent-kaurene oxidase 100.0 1.1E-46 2.3E-51 321.6 18.7 196 1-199 270-465 (466)
21 KOG0159 Cytochrome P450 CYP11/ 100.0 4.9E-47 1.1E-51 315.0 15.1 194 1-198 324-518 (519)
22 PLN03018 homomethionine N-hydr 100.0 2.4E-46 5.1E-51 323.7 19.8 198 1-199 322-525 (534)
23 PLN02500 cytochrome P450 90B1 100.0 1.4E-46 3E-51 322.8 17.7 191 1-196 287-488 (490)
24 PLN02774 brassinosteroid-6-oxi 100.0 8.8E-46 1.9E-50 315.8 18.2 188 1-196 272-462 (463)
25 PLN02936 epsilon-ring hydroxyl 100.0 1.1E-45 2.3E-50 317.1 18.2 196 1-199 286-483 (489)
26 PLN03141 3-epi-6-deoxocathaste 100.0 2.4E-45 5.2E-50 312.2 17.2 187 1-197 259-449 (452)
27 PLN02302 ent-kaurenoic acid ox 100.0 1.3E-44 2.9E-49 310.2 17.5 192 1-200 295-490 (490)
28 PLN02196 abscisic acid 8'-hydr 100.0 2.9E-44 6.3E-49 306.4 16.7 187 1-196 272-461 (463)
29 PLN02987 Cytochrome P450, fami 100.0 1.4E-43 3E-48 302.7 18.6 191 1-197 275-468 (472)
30 KOG0684 Cytochrome P450 [Secon 100.0 5.2E-43 1.1E-47 285.5 14.4 196 1-198 281-485 (486)
31 COG2124 CypX Cytochrome P450 [ 100.0 5.9E-38 1.3E-42 263.7 13.0 167 1-197 244-410 (411)
32 PLN02648 allene oxide synthase 100.0 3.5E-37 7.5E-42 262.9 14.3 164 4-171 283-462 (480)
33 COG1759 5-formaminoimidazole-4 68.8 8.5 0.00018 31.6 4.0 71 55-158 275-352 (361)
34 PF12508 DUF3714: Protein of u 59.4 2.4 5.1E-05 32.4 -0.6 43 52-96 52-94 (200)
35 PF08492 SRP72: SRP72 RNA-bind 45.2 17 0.00038 21.9 1.7 8 115-122 44-51 (59)
36 PF09201 SRX: SRX; InterPro: 43.8 20 0.00042 25.6 2.0 24 141-164 18-41 (148)
37 PF05952 ComX: Bacillus compet 43.4 27 0.0006 20.9 2.3 22 15-36 4-25 (57)
38 PF08285 DPM3: Dolichol-phosph 38.1 55 0.0012 21.6 3.4 28 11-38 54-81 (91)
39 COG2101 SPT15 TATA-box binding 36.2 14 0.00029 27.6 0.3 36 112-147 35-70 (185)
40 TIGR03779 Bac_Flav_CT_M Bacter 35.9 10 0.00022 32.3 -0.5 21 77-97 278-298 (410)
41 PRK06789 flagellar motor switc 33.8 39 0.00085 21.4 2.1 41 58-98 21-63 (74)
42 PF14550 Peptidase_U35_2: Puta 30.7 39 0.00085 23.6 1.9 22 75-96 71-92 (122)
43 cd04518 TBP_archaea archaeal T 30.2 16 0.00034 27.3 -0.2 35 112-146 29-63 (174)
44 cd00652 TBP_TLF TATA box bindi 29.6 50 0.0011 24.6 2.4 55 112-167 29-86 (174)
45 KOG3302 TATA-box binding prote 27.0 24 0.00052 26.8 0.3 34 112-145 50-83 (200)
46 PF14129 DUF4296: Domain of un 27.0 1.3E+02 0.0028 19.4 3.8 34 5-38 45-78 (87)
47 KOG3506 40S ribosomal protein 26.6 29 0.00062 20.5 0.5 10 135-144 13-22 (56)
48 PF14824 Sirohm_synth_M: Siroh 25.2 1.1E+02 0.0023 15.7 2.4 15 23-37 15-29 (30)
49 PF14483 Cut8_M: Cut8 dimerisa 24.6 1E+02 0.0022 16.6 2.5 21 12-32 14-35 (38)
50 PF15300 INT_SG_DDX_CT_C: INTS 24.5 42 0.00091 20.7 1.0 15 52-66 40-54 (65)
51 PF02663 FmdE: FmdE, Molybdenu 22.4 84 0.0018 21.9 2.4 22 141-162 5-26 (131)
52 PRK00394 transcription factor; 22.2 28 0.00062 26.0 -0.1 34 112-145 28-61 (179)
53 PRK05933 type III secretion sy 20.5 89 0.0019 25.9 2.4 43 56-98 318-363 (372)
No 1
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-51 Score=345.89 Aligned_cols=194 Identities=31% Similarity=0.525 Sum_probs=177.5
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||.||||++|+.++|+|++||++|+||++||+++..+....+.+.+.+|+||++||+||||+||+++. ..|.+.+|
T Consensus 302 Fl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~ 380 (499)
T KOG0158|consen 302 FLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKD 380 (499)
T ss_pred HHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCc
Confidence 47899999999999999999999999999999999997665559999999999999999999999999998 88999999
Q ss_pred cccc-CeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHHHHH
Q 040855 81 STVG-GYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYSVAT 159 (205)
Q Consensus 81 ~~~~-~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ 159 (205)
.+++ ++.||+|+.|.++.+++||||++||||++|+||||.+++.+ ...+..|+|||.|+|+|+|.+||.+|+|++|++
T Consensus 381 ~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~ 459 (499)
T KOG0158|consen 381 YEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAH 459 (499)
T ss_pred eecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHH
Confidence 9999 99999999999999999999999999999999999987654 446779999999999999999999999999999
Q ss_pred HhhhCeeeCCCCCCCCccccc---ceeeccCCCeeEEeeecC
Q 040855 160 LLHSFDWKLPEGQKVDLTEKF---GIVLKLKNPLAAIPTPRL 198 (205)
Q Consensus 160 ll~~f~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r~ 198 (205)
||++|+++..+.+. .. ... ++++.|++++.+.+++|.
T Consensus 460 lL~~f~~~~~~~t~-~~-~~~~~~~~~l~pk~gi~Lkl~~r~ 499 (499)
T KOG0158|consen 460 LLRNFSFEVCPTTI-IP-LEGDPKGFTLSPKGGIWLKLEPRD 499 (499)
T ss_pred HHhhCEEecCCccc-Cc-ccCCccceeeecCCceEEEEEeCC
Confidence 99999999887422 22 333 788899999999999984
No 2
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7e-51 Score=345.65 Aligned_cols=195 Identities=57% Similarity=1.047 Sum_probs=180.9
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
|++||+|||++++.|++.+|+.||++|+|+++||++++|.+...+++++.++|||+|+|+|++|++|++|+.++|.+++|
T Consensus 294 l~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d 373 (489)
T KOG0156|consen 294 LFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTED 373 (489)
T ss_pred HHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCC
Confidence 57899999999999999999999999999999999999988779999999999999999999999999999999999999
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYSVATL 160 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~l 160 (205)
+.++||.|||||.|.++.|++|+||++|+||++|+||||++++ +.+.....++|||.|+|+|||..+|.+++.++++.+
T Consensus 374 ~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~l 452 (489)
T KOG0156|consen 374 TKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANL 452 (489)
T ss_pred eeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999985 334467899999999999999999999999999999
Q ss_pred hhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeecC
Q 040855 161 LHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPRL 198 (205)
Q Consensus 161 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 198 (205)
+++|+|+++++ .+++... +..+..+.++.+...+|.
T Consensus 453 lq~F~w~~~~~-~~d~~e~-~~~~~~~~pl~~~~~~r~ 488 (489)
T KOG0156|consen 453 LQRFDWKLPGG-KVDMEEA-GLTLKKKKPLKAVPVPRL 488 (489)
T ss_pred HheeeeecCCC-CCCCccc-ccceecCCcceeeeecCC
Confidence 99999999988 6677666 466667778888888774
No 3
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=2.8e-49 Score=340.32 Aligned_cols=198 Identities=43% Similarity=0.782 Sum_probs=175.8
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+.+++|++++|++||++|+||++|++++.+.+...+.+++.+|||++|||+|++|++|+++...+|.+.+|
T Consensus 301 ~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d 380 (503)
T PLN02394 301 INVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLED 380 (503)
T ss_pred HHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCC
Confidence 35899999999999999999999999999999999998866667888899999999999999999999999878999999
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCC--CCCCCCceeecCCCccCCccHHHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWD--YSGSDFNYFPFGSGRRICAGIAMAERMFLYSVA 158 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~ 158 (205)
..++||.||+||.|.++.+++|+||++|+||++|+|+||++++.. .......++|||.|+|+|+|+++|++|++++++
T Consensus 381 ~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la 460 (503)
T PLN02394 381 AKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLG 460 (503)
T ss_pred cccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975432 122356899999999999999999999999999
Q ss_pred HHhhhCeeeCCCCC-CCCcccccc-eeeccCCCeeEEeeecC
Q 040855 159 TLLHSFDWKLPEGQ-KVDLTEKFG-IVLKLKNPLAAIPTPRL 198 (205)
Q Consensus 159 ~ll~~f~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~r~ 198 (205)
.++++|++++.++. ..+....++ +.+..+.++.+.+.+|+
T Consensus 461 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 502 (503)
T PLN02394 461 RLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRS 502 (503)
T ss_pred HHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecCC
Confidence 99999999988775 355555564 55534558999999996
No 4
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=2.8e-49 Score=343.02 Aligned_cols=202 Identities=39% Similarity=0.749 Sum_probs=179.8
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+.+++|++++|+.||++|+|+++||+++++.+...+.+++.+|||++|||+|++|++|+++...+|.+.+|
T Consensus 335 l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d 414 (543)
T PLN02971 335 LVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSD 414 (543)
T ss_pred HheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCC
Confidence 57899999999999999999999999999999999999877778999999999999999999999999998788999999
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCC--CCCCCCceeecCCCccCCccHHHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWD--YSGSDFNYFPFGSGRRICAGIAMAERMFLYSVA 158 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~ 158 (205)
..++||.||||+.|+++.+++|+||++|+||++|+|+||+++..+ ....++.++|||.|+|.|+|++||+.|++++++
T Consensus 415 ~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la 494 (543)
T PLN02971 415 TTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLA 494 (543)
T ss_pred eeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975432 122456899999999999999999999999999
Q ss_pred HHhhhCeeeCCCC-CCCCcccccceeeccCCCeeEEeeecCCCCCCC
Q 040855 159 TLLHSFDWKLPEG-QKVDLTEKFGIVLKLKNPLAAIPTPRLSDPALY 204 (205)
Q Consensus 159 ~ll~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 204 (205)
.|+++|+|+++++ ...++...++ .+..++++.+.+++|.. +++|
T Consensus 495 ~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~ 539 (543)
T PLN02971 495 RLLQGFKWKLAGSETRVELMESSH-DMFLSKPLVMVGELRLS-EDLY 539 (543)
T ss_pred HHHHhCEEEeCCCCCCcchhhhcC-cccccccceeeeeecCC-cccc
Confidence 9999999998875 3566766666 55445589999999944 4544
No 5
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=1.1e-48 Score=335.19 Aligned_cols=191 Identities=31% Similarity=0.592 Sum_probs=172.2
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+.+++|++++|++||++|+|+++|+++++++....+.+++.+|||+++|++|++|++|+++...+|.+.+|
T Consensus 291 ~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d 370 (482)
T PTZ00404 291 FFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSND 370 (482)
T ss_pred HHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCC
Confidence 47899999999999999999999999999999999999876667888999999999999999999999997678999999
Q ss_pred ccc-cCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHHHHH
Q 040855 81 STV-GGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYSVAT 159 (205)
Q Consensus 81 ~~~-~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ 159 (205)
+++ +|+.||+|+.|.++.+++|+||++|+||++|+|+||+++. .+..++|||.|+|.|+|+++|++|++++++.
T Consensus 371 ~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ 445 (482)
T PTZ00404 371 IIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSN 445 (482)
T ss_pred EEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999998743 4568999999999999999999999999999
Q ss_pred HhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeec
Q 040855 160 LLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPR 197 (205)
Q Consensus 160 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 197 (205)
++++|+++++++++.......++.+. +.++.+.+++|
T Consensus 446 ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R 482 (482)
T PTZ00404 446 IILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR 482 (482)
T ss_pred HHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence 99999999887755444444556666 45788888876
No 6
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=1.7e-48 Score=335.26 Aligned_cols=197 Identities=39% Similarity=0.759 Sum_probs=175.9
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+++++|++++|++||++|+++++|+++++++....+.+++.+|||+++||+|++|++|++++..+|.+.+|
T Consensus 296 ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d 375 (499)
T PLN03234 296 IVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIAD 375 (499)
T ss_pred HHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCC
Confidence 47899999999999999999999999999999999999876677889999999999999999999999998667899899
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCC-CCCCCCCCCCcCCCCCC--CCCCCCceeecCCCccCCccHHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIW-KNPLEFNPERFLNSKWD--YSGSDFNYFPFGSGRRICAGIAMAERMFLYSV 157 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l 157 (205)
..++|+.||+||.|.++.+++|+||++| +||++|+|+||+++... ....+..++|||.|+|+|+|+++|++|+++++
T Consensus 376 ~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~l 455 (499)
T PLN03234 376 AKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPF 455 (499)
T ss_pred eeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHH
Confidence 9999999999999999999999999999 89999999999975432 22346689999999999999999999999999
Q ss_pred HHHhhhCeeeCCCCC---CCCcccccceeeccCCCeeEEeeec
Q 040855 158 ATLLHSFDWKLPEGQ---KVDLTEKFGIVLKLKNPLAAIPTPR 197 (205)
Q Consensus 158 ~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r 197 (205)
+.|+++|+++++++. .......+++...++..+.+.+++|
T Consensus 456 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (499)
T PLN03234 456 ANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH 498 (499)
T ss_pred HHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence 999999999998762 3344456677778888888877776
No 7
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=3.1e-48 Score=332.72 Aligned_cols=196 Identities=35% Similarity=0.620 Sum_probs=174.3
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCC-CCcccccCChhHHHHHHhHhcCCCCCCCCCccccCC
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNI-VEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTE 79 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~ 79 (205)
|+|||+|||+++++|+++.|+.||++|+++++|+.+++++... .+....++|+|+++||+||+||||++|. ..|.+.+
T Consensus 299 f~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~ 377 (497)
T KOG0157|consen 299 FMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATK 377 (497)
T ss_pred heeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCC
Confidence 6899999999999999999999999999999999999975433 2333333699999999999999999998 6799999
Q ss_pred cccc-cCeEecCCCEEEeechhhhcCCCCCC-CCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHHH
Q 040855 80 TSTV-GGYTVPKGARVFVNVWAIHRDPSIWK-NPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYSV 157 (205)
Q Consensus 80 ~~~~-~~~~ip~g~~v~~~~~~~~~d~~~~~-~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l 157 (205)
|..+ +|+.||||+.|.++.+++|||+.+|+ ||++|||+||+++.......+++|+|||+|+|.|+|++||++|||+++
T Consensus 378 d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l 457 (497)
T KOG0157|consen 378 DVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVL 457 (497)
T ss_pred CeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHH
Confidence 9999 48999999999999999999999996 999999999997643334457899999999999999999999999999
Q ss_pred HHHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeecCC
Q 040855 158 ATLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPRLS 199 (205)
Q Consensus 158 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 199 (205)
++++++|+|++..+.. .....+.++.++.++.+.+++|.+
T Consensus 458 ~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl~v~~~~r~~ 497 (497)
T KOG0157|consen 458 AHLLRRFRIEPVGGDK--PKPVPELTLRPKNGLKVKLRPRGS 497 (497)
T ss_pred HHHHHheEEEecCCCC--ceeeeEEEEEecCCeEEEEEeCCC
Confidence 9999999999887744 566778999999999999999853
No 8
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=6.5e-48 Score=331.83 Aligned_cols=199 Identities=48% Similarity=0.924 Sum_probs=178.5
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+.+++|++++|++||++|+|+++|+++++++....+.+++.++||+++|++|++|++|+++..++|.+.+|
T Consensus 297 ~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d 376 (504)
T PLN00110 297 LFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQA 376 (504)
T ss_pred hhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCC
Confidence 47899999999999999999999999999999999998876678889999999999999999999999998778999999
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCC---CCCCceeecCCCccCCccHHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYS---GSDFNYFPFGSGRRICAGIAMAERMFLYSV 157 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l 157 (205)
+.++||.||+|+.|.++.+++|+||++|+||++|+|+||+++..... .....++|||.|+|.|+|++||+.|+++++
T Consensus 377 ~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~l 456 (504)
T PLN00110 377 CEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYIL 456 (504)
T ss_pred eeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999996542211 123579999999999999999999999999
Q ss_pred HHHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeecCC
Q 040855 158 ATLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPRLS 199 (205)
Q Consensus 158 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 199 (205)
+.|+++|++++.++.+.+.....++++.++.++.+.+++|..
T Consensus 457 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 498 (504)
T PLN00110 457 GTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRLH 498 (504)
T ss_pred HHHHHhceeecCCCCccCcccccccccccCCCceEeeccCCC
Confidence 999999999998875544444567778888899999999953
No 9
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=4e-48 Score=334.14 Aligned_cols=196 Identities=47% Similarity=0.863 Sum_probs=172.6
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+.+++|++++|++||++|+|+++|++++++.....+.+++.+|||+++|++|++|++|+++.. .|.+.+|
T Consensus 312 ~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d 390 (516)
T PLN02183 312 VMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAED 390 (516)
T ss_pred HHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCc
Confidence 478999999999999999999999999999999999988656678899999999999999999999999985 5888999
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCC-CCCCCCceeecCCCccCCccHHHHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWD-YSGSDFNYFPFGSGRRICAGIAMAERMFLYSVAT 159 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ 159 (205)
++++|+.||||+.|.++.+++|+||++|+||++|+|+||++++.. .....+.|+|||.|+|+|+|+++|++|++++++.
T Consensus 391 ~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ 470 (516)
T PLN02183 391 AEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAH 470 (516)
T ss_pred eeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975431 1234568999999999999999999999999999
Q ss_pred HhhhCeeeCCCCCC---CCcccccceeeccCCCeeEEeeec
Q 040855 160 LLHSFDWKLPEGQK---VDLTEKFGIVLKLKNPLAAIPTPR 197 (205)
Q Consensus 160 ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~r 197 (205)
|+++|++++.++.. .+....++...+..+++.+.+++|
T Consensus 471 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 511 (516)
T PLN02183 471 LLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYR 511 (516)
T ss_pred HHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeecC
Confidence 99999999887632 333334455555566888888888
No 10
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=8.1e-48 Score=332.42 Aligned_cols=199 Identities=38% Similarity=0.674 Sum_probs=174.8
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCC-CCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCC
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRD-NIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTE 79 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~ 79 (205)
+++||+|||+.+++|++++|++||++|+|+++||+++++.+ ...+.+++.+|||+++|++|++|++|+++..++|.+.+
T Consensus 314 l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~ 393 (519)
T PLN00168 314 FLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAE 393 (519)
T ss_pred HHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCC
Confidence 47899999999999999999999999999999999998753 56788899999999999999999999999877899999
Q ss_pred cccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCC----C-CCCCCceeecCCCccCCccHHHHHHHHH
Q 040855 80 TSTVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWD----Y-SGSDFNYFPFGSGRRICAGIAMAERMFL 154 (205)
Q Consensus 80 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~----~-~~~~~~~~~Fg~G~r~C~G~~~a~~~~~ 154 (205)
|++++||.||||+.|.++.+++|+||++|+||++|+|+||+++... . ....+.++|||.|+|+|+|++||++|++
T Consensus 394 d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~ 473 (519)
T PLN00168 394 DMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLE 473 (519)
T ss_pred CccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999974311 1 1234689999999999999999999999
Q ss_pred HHHHHHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeecCC
Q 040855 155 YSVATLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPRLS 199 (205)
Q Consensus 155 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 199 (205)
++++.|+++|+|++.++...+.....++...++.++.+.+++|+.
T Consensus 474 ~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~ 518 (519)
T PLN00168 474 YFVANMVREFEWKEVPGDEVDFAEKREFTTVMAKPLRARLVPRRT 518 (519)
T ss_pred HHHHHHHHHccceeCCCCcCChhhhceeEEeecCCcEEEEEeccC
Confidence 999999999999988764444433345566666789999999864
No 11
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=5.7e-48 Score=331.87 Aligned_cols=189 Identities=25% Similarity=0.508 Sum_probs=165.8
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+++++|++++|++||++|+|+++||++++ +.+++.+|||+++|++|++|++|++|...++.+.++
T Consensus 309 ~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~ 382 (500)
T PLN02169 309 LVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPD 382 (500)
T ss_pred HHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCC
Confidence 47899999999999999999999999999999999864 467889999999999999999999998655555555
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCC-CCCCCCCCCCcCCCCCCCC-CCCCceeecCCCccCCccHHHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIW-KNPLEFNPERFLNSKWDYS-GSDFNYFPFGSGRRICAGIAMAERMFLYSVA 158 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~ 158 (205)
+.++|+.||+|+.|.++.+++||||++| +||++|+|+||++++.... ..++.|+|||.|+|+|+|++||++|++++++
T Consensus 383 ~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la 462 (500)
T PLN02169 383 VLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVAL 462 (500)
T ss_pred CccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 5569999999999999999999999999 8999999999997543321 2367899999999999999999999999999
Q ss_pred HHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeec
Q 040855 159 TLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPR 197 (205)
Q Consensus 159 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 197 (205)
.|+++|+++++++..+ ....++++.++.++.+.+++|
T Consensus 463 ~ll~~f~~~~~~~~~~--~~~~~~~l~~~~gl~l~l~~~ 499 (500)
T PLN02169 463 EIIKNYDFKVIEGHKI--EAIPSILLRMKHGLKVTVTKK 499 (500)
T ss_pred HHHHHCEEEEcCCCCc--ccccceEEecCCCEEEEEEeC
Confidence 9999999998765433 334467788899999999987
No 12
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=1e-47 Score=331.40 Aligned_cols=203 Identities=41% Similarity=0.819 Sum_probs=179.5
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+.+++|++++|++||++|+|+++|+++++++....+.+++.+|||++++++|++|++|++++..+|.+.+|
T Consensus 304 ~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d 383 (514)
T PLN03112 304 MIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRA 383 (514)
T ss_pred HhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCC
Confidence 57899999999999999999999999999999999998876678999999999999999999999999998778999999
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCC--C--CCCCCceeecCCCccCCccHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWD--Y--SGSDFNYFPFGSGRRICAGIAMAERMFLYS 156 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~--~--~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~ 156 (205)
..++|+.||+|+.|.++.+++|+||++|+||++|+|+||+++... . ......++|||.|+|+|+|++||++|++++
T Consensus 384 ~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~ 463 (514)
T PLN03112 384 TTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMA 463 (514)
T ss_pred eeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998764311 0 123468999999999999999999999999
Q ss_pred HHHHhhhCeeeCCCCC---CCCcccccceeeccCCCeeEEeeecCCCCCCC
Q 040855 157 VATLLHSFDWKLPEGQ---KVDLTEKFGIVLKLKNPLAAIPTPRLSDPALY 204 (205)
Q Consensus 157 l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 204 (205)
++.|+++|++++.++. +......+++.+++++++.+.+++|. ++|+|
T Consensus 464 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~ 513 (514)
T PLN03112 464 LARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRL-APHLY 513 (514)
T ss_pred HHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCC-ccccc
Confidence 9999999999987652 33444455677777789999999995 66665
No 13
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=1.5e-47 Score=329.58 Aligned_cols=198 Identities=38% Similarity=0.777 Sum_probs=170.1
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCC--CCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccC
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRD--NIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPT 78 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~--~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~ 78 (205)
+++||+|||+.+++|++++|++||++|+|+++|++++++.+ ...+.+++.+|||+++|++|++|++|+++...+|.+.
T Consensus 297 l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~ 376 (502)
T PLN02966 297 IVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACI 376 (502)
T ss_pred HHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccC
Confidence 47899999999999999999999999999999999998743 3468889999999999999999999999987789999
Q ss_pred CcccccCeEecCCCEEEeechhhhcCCCCC-CCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHHH
Q 040855 79 ETSTVGGYTVPKGARVFVNVWAIHRDPSIW-KNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYSV 157 (205)
Q Consensus 79 ~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l 157 (205)
+|+.++|+.||+||.|.++.+++||||++| +||++|+|+||++++.+.......++|||.|+|+|+|++||.+|+++++
T Consensus 377 ~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~l 456 (502)
T PLN02966 377 QDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPY 456 (502)
T ss_pred CCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999 9999999999997543322345689999999999999999999999999
Q ss_pred HHHhhhCeeeCCCCC---CCCcccccceeeccCCCeeEEeeecCCC
Q 040855 158 ATLLHSFDWKLPEGQ---KVDLTEKFGIVLKLKNPLAAIPTPRLSD 200 (205)
Q Consensus 158 ~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 200 (205)
+.|+++|+|++.++. .++.+...++...++..+. +++|+-|
T Consensus 457 a~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 500 (502)
T PLN02966 457 ANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLK--LVPEKVN 500 (502)
T ss_pred HHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeE--EEEEeCC
Confidence 999999999988763 3444455566654444454 4444433
No 14
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=3.8e-47 Score=328.07 Aligned_cols=191 Identities=27% Similarity=0.485 Sum_probs=171.5
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+++++|++++|++||++|+|+++|++++++++ ..+.+++.+|||++|||+|++|++|+++. .+|.+.+|
T Consensus 324 ~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d 401 (516)
T PLN02290 324 FFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFED 401 (516)
T ss_pred HHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCC
Confidence 47899999999999999999999999999999999998864 67889999999999999999999999986 68999999
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCC-CCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIW-KNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYSVAT 159 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ 159 (205)
+.++|+.||+|+.|.++.+++|+||++| +||++|+|+||++++. .....++|||.|+|.|+|+++|++|++++++.
T Consensus 402 ~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ 478 (516)
T PLN02290 402 IKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAM 478 (516)
T ss_pred eeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 8999999999995431 12457999999999999999999999999999
Q ss_pred HhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeecC
Q 040855 160 LLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPRL 198 (205)
Q Consensus 160 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 198 (205)
|+++|++++.++.. .....++.+.|+.++.+.+++|+
T Consensus 479 ll~~f~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~ 515 (516)
T PLN02290 479 LISKFSFTISDNYR--HAPVVVLTIKPKYGVQVCLKPLN 515 (516)
T ss_pred HHHhceEeeCCCcc--cCccceeeecCCCCCeEEEEeCC
Confidence 99999999877532 22223577888899999999985
No 15
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=3.6e-47 Score=328.21 Aligned_cols=196 Identities=27% Similarity=0.402 Sum_probs=165.6
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCC--------------------CCCCCcccccCChhHHHHHH
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGR--------------------DNIVEESHIYKLPYLFAVMK 60 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~--------------------~~~~~~~~~~~l~~l~~~i~ 60 (205)
+++||+|||+.+++|++++|++||++|+||++|++++.++ ....+.+++.+|||++|||+
T Consensus 300 ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~ 379 (516)
T PLN03195 300 FVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVIT 379 (516)
T ss_pred HHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHH
Confidence 4789999999999999999999999999999999987642 23467888999999999999
Q ss_pred hHhcCCCCCCCCCccccCCcccccCeEecCCCEEEeechhhhcCCCCC-CCCCCCCCCCcCCCCCCCCCCCCceeecCCC
Q 040855 61 ETLRLHPALPLLVPHCPTETSTVGGYTVPKGARVFVNVWAIHRDPSIW-KNPLEFNPERFLNSKWDYSGSDFNYFPFGSG 139 (205)
Q Consensus 61 E~lRl~~~~~~~~~r~~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G 139 (205)
|++|++|+++...++...++..++|+.||||+.|.++.+++|+||++| +||++|+|+||+++.......+..|+|||.|
T Consensus 380 EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G 459 (516)
T PLN03195 380 ETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAG 459 (516)
T ss_pred HHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCC
Confidence 999999999986544444444459999999999999999999999999 9999999999996432112245679999999
Q ss_pred ccCCccHHHHHHHHHHHHHHHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeecC
Q 040855 140 RRICAGIAMAERMFLYSVATLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPRL 198 (205)
Q Consensus 140 ~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 198 (205)
+|+|+|++||++|++++++.|+++|++++.++.+.. ......+.++.++.+.+++|.
T Consensus 460 ~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~r~ 516 (516)
T PLN03195 460 PRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVK--YRMMTILSMANGLKVTVSRRS 516 (516)
T ss_pred CCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcce--eeeeeEEecCCCEEEEEEeCC
Confidence 999999999999999999999999999987654332 233455678889999999874
No 16
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=8.2e-47 Score=326.03 Aligned_cols=198 Identities=51% Similarity=0.954 Sum_probs=175.1
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+.+++|++++|++||++++++++|++++++.....+.+++.+|||+++|++|++|++|+++..++|.+.+|
T Consensus 305 ~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d 384 (517)
T PLN02687 305 LFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEE 384 (517)
T ss_pred HhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCC
Confidence 47899999999999999999999999999999999998876678889999999999999999999999998778999999
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCC----CCCCCCceeecCCCccCCccHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWD----YSGSDFNYFPFGSGRRICAGIAMAERMFLYS 156 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~----~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~ 156 (205)
++++|+.||+|+.|.++.+++|+||++|+||++|+|+||+++... ....+..++|||.|+|.|+|++||++|++++
T Consensus 385 ~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~ 464 (517)
T PLN02687 385 CEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLL 464 (517)
T ss_pred eeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975321 1223457999999999999999999999999
Q ss_pred HHHHhhhCeeeCCCCC---CCCcccccceeeccCCCeeEEeeecC
Q 040855 157 VATLLHSFDWKLPEGQ---KVDLTEKFGIVLKLKNPLAAIPTPRL 198 (205)
Q Consensus 157 l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~ 198 (205)
++.|+++|++++.++. +++.....+....++.++.+.+++|+
T Consensus 465 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~ 509 (517)
T PLN02687 465 TATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL 509 (517)
T ss_pred HHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCC
Confidence 9999999999988763 23333345566666678999999985
No 17
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=1.1e-47 Score=323.21 Aligned_cols=192 Identities=39% Similarity=0.714 Sum_probs=167.2
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+.+++|++++|++||++|++|++|++++.++....+.+++.++|||++|++|++|++|+++..++|.+.+|
T Consensus 270 ~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d 349 (463)
T PF00067_consen 270 LLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATED 349 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 46899999999999999999999999999999999999766778899999999999999999999999996688999999
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYSVATL 160 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~l 160 (205)
++++|+.||+|+.|.++.+++|+||++|+||++|+|+||++++.........++|||.|+|.|+|+++|+.|++++++.|
T Consensus 350 ~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~l 429 (463)
T PF00067_consen 350 VTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKL 429 (463)
T ss_dssp EEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998875333457789999999999999999999999999999
Q ss_pred hhhCeeeCCCCCCCCccccc-ceeeccCCCeeEE
Q 040855 161 LHSFDWKLPEGQKVDLTEKF-GIVLKLKNPLAAI 193 (205)
Q Consensus 161 l~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 193 (205)
+++|++++.++......... +++.+++ ++.|.
T Consensus 430 l~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 462 (463)
T PF00067_consen 430 LRRFDFELVPGSEPEPQEQQNGFLLPPK-PLKVK 462 (463)
T ss_dssp HHHEEEEESTTSSGGEEECSCSSSEEES-SSEEE
T ss_pred HHhCEEEECCCCCCCCccccCceEeeCC-CcEEe
Confidence 99999999776444444333 4555544 45554
No 18
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=8.9e-47 Score=324.43 Aligned_cols=198 Identities=25% Similarity=0.395 Sum_probs=171.0
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCC-CCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCC
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRD-NIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTE 79 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~ 79 (205)
+++||+|||+++++|++++|++||++|+|+++|++++.+.+ ...+.+++.+|||+++||+|++|++|+++.. .|.+.+
T Consensus 301 ~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~ 379 (502)
T PLN02426 301 FLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAE 379 (502)
T ss_pred HHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeecc
Confidence 47899999999999999999999999999999999988753 3578899999999999999999999999985 577777
Q ss_pred cccc-cCeEecCCCEEEeechhhhcCCCCC-CCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHHH
Q 040855 80 TSTV-GGYTVPKGARVFVNVWAIHRDPSIW-KNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYSV 157 (205)
Q Consensus 80 ~~~~-~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l 157 (205)
|..+ +|+.||+|+.|.++.+++||||++| +||++|+|+||+++.......+..++|||.|+|.|+|+++|++|+++++
T Consensus 380 d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~l 459 (502)
T PLN02426 380 DDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVA 459 (502)
T ss_pred CCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHH
Confidence 6666 9999999999999999999999999 9999999999997432112245679999999999999999999999999
Q ss_pred HHHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeecCC
Q 040855 158 ATLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPRLS 199 (205)
Q Consensus 158 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 199 (205)
+.|+++|++++.++.........++++.+++++.+++++|+.
T Consensus 460 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~~ 501 (502)
T PLN02426 460 VAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERVR 501 (502)
T ss_pred HHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEccC
Confidence 999999999986543222233446778889999999999853
No 19
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=1.2e-46 Score=330.14 Aligned_cols=198 Identities=29% Similarity=0.585 Sum_probs=173.3
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+.+|+|++++|++||++|+||++|+++++++ ...+.+++++||||++||+|++|++|+++. ..|.+.+|
T Consensus 399 ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~-~~R~a~~d 476 (633)
T PLN02738 399 MLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPV-LIRRSLEN 476 (633)
T ss_pred HHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCccc-cceeeccC
Confidence 4789999999999999999999999999999999999874 567889999999999999999999999998 45777888
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCC--CCCCCCCceeecCCCccCCccHHHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKW--DYSGSDFNYFPFGSGRRICAGIAMAERMFLYSVA 158 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~ 158 (205)
..++||.||+||.|.++.+.+|+||++|+||++|+|+||+.+.. ........++|||.|+|+|+|++||++|++++++
T Consensus 477 ~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA 556 (633)
T PLN02738 477 DMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATA 556 (633)
T ss_pred ceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999985321 1223456899999999999999999999999999
Q ss_pred HHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeecCCCC
Q 040855 159 TLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPRLSDP 201 (205)
Q Consensus 159 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 201 (205)
.|+++|+|++.++.. +.....++++.++.++.+.+++|.+-.
T Consensus 557 ~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~~~ 598 (633)
T PLN02738 557 MLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTKPP 598 (633)
T ss_pred HHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCCCC
Confidence 999999999887642 223334566777889999999996644
No 20
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=1.1e-46 Score=321.63 Aligned_cols=196 Identities=36% Similarity=0.679 Sum_probs=175.6
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+.+++|++++|++||++|+++++|++++++... .+.+++.++||+++|++|++|++|+++...+|.+.+|
T Consensus 270 ~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d 348 (466)
T PLN02655 270 PIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHED 348 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCC
Confidence 478999999999999999999999999999999999988644 8899999999999999999999999998778999999
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYSVATL 160 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~l 160 (205)
+.++|+.||||+.|+++.+++|+||++|+||++|+|+||+++... ....+.++|||.|+|.|||++||..+++++++.|
T Consensus 349 ~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~l 427 (466)
T PLN02655 349 TTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYE-SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARL 427 (466)
T ss_pred cccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcc-cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975422 1234689999999999999999999999999999
Q ss_pred hhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeecCC
Q 040855 161 LHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPRLS 199 (205)
Q Consensus 161 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 199 (205)
+++|++++.++.. ......+++..++.++.+.+++|.+
T Consensus 428 l~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~ 465 (466)
T PLN02655 428 VQEFEWRLREGDE-EKEDTVQLTTQKLHPLHAHLKPRGS 465 (466)
T ss_pred HHHeEEEeCCCCc-cccchhheeEeecCCcEEEEeecCC
Confidence 9999999877632 2234557777788899999999865
No 21
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.9e-47 Score=315.00 Aligned_cols=194 Identities=31% Similarity=0.518 Sum_probs=178.3
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCC-CCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCC
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGR-DNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTE 79 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~ 79 (205)
|++||.|||+.++.|.+|+|++||+.|++|++|+.++... +...+.+.+.++|||+|||+|++|+||.++. ..|+..+
T Consensus 324 ll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~~ 402 (519)
T KOG0159|consen 324 LLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG-NGRVLPK 402 (519)
T ss_pred HHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc-cccccch
Confidence 5789999999999999999999999999999999999886 5678889999999999999999999999998 6899999
Q ss_pred cccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHHHHH
Q 040855 80 TSTVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYSVAT 159 (205)
Q Consensus 80 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ 159 (205)
|..++||.|||||.|.+..+.+.+||++|++|++|.|+||++++- .+.+++.++|||.|+|+|+||.||.+|+-+.++.
T Consensus 403 D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLar 481 (519)
T KOG0159|consen 403 DLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLAR 481 (519)
T ss_pred hceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998773 2457889999999999999999999999999999
Q ss_pred HhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeecC
Q 040855 160 LLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPRL 198 (205)
Q Consensus 160 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 198 (205)
++++|+++...+.+ ....+.+++.|..++.+.+++|.
T Consensus 482 llr~f~V~~~~~~p--v~~~~~~il~P~~~l~f~f~~r~ 518 (519)
T KOG0159|consen 482 LLRNFKVEFLHEEP--VEYVYRFILVPNRPLRFKFRPRN 518 (519)
T ss_pred HHHhcceeecCCCC--ccceeEEEEcCCCCcceeeeeCC
Confidence 99999999877644 44456788889999999999883
No 22
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=2.4e-46 Score=323.75 Aligned_cols=198 Identities=36% Similarity=0.699 Sum_probs=173.6
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+.+++|++++|+.||++|+++++||+++++.+...+.+++.++||+++|++|++|++|+++...+|.+.+|
T Consensus 322 ~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d 401 (534)
T PLN03018 322 FCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQD 401 (534)
T ss_pred HHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCC
Confidence 47899999999999999999999999999999999999876678888999999999999999999999998768999999
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCC-----CCCCCceeecCCCccCCccHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDY-----SGSDFNYFPFGSGRRICAGIAMAERMFLY 155 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~ 155 (205)
+.++||.||||+.|.++.+++|+||++|+||++|+|+||++++... ...+..++|||.|+|+|+|+++|.+|+++
T Consensus 402 ~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~ 481 (534)
T PLN03018 402 TTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVM 481 (534)
T ss_pred eeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999754211 12456899999999999999999999999
Q ss_pred HHHHHhhhCeeeCCCCC-CCCcccccceeeccCCCeeEEeeecCC
Q 040855 156 SVATLLHSFDWKLPEGQ-KVDLTEKFGIVLKLKNPLAAIPTPRLS 199 (205)
Q Consensus 156 ~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~ 199 (205)
+++.|+++|+|++.++. .++.....+.... +.++.+.+++|..
T Consensus 482 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-p~~~~v~~~~R~~ 525 (534)
T PLN03018 482 MLARFLQGFNWKLHQDFGPLSLEEDDASLLM-AKPLLLSVEPRLA 525 (534)
T ss_pred HHHHHHHhceEEeCCCCCCCCccccccceec-CCCeEEEEEeccc
Confidence 99999999999987663 3334333344444 4589999999943
No 23
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=1.4e-46 Score=322.76 Aligned_cols=191 Identities=24% Similarity=0.445 Sum_probs=163.9
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhC-----CCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCcc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVG-----RDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPH 75 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~-----~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r 75 (205)
+++||+|||+.+++|++++|++||++|+|+++|++++++ .....+.+++.+|||+++|++|++|++|+++. .+|
T Consensus 287 ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R 365 (490)
T PLN02500 287 LLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHR 365 (490)
T ss_pred HHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eee
Confidence 478999999999999999999999999999999998863 12346888999999999999999999999998 579
Q ss_pred ccCCcccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCC------CCCCceeecCCCccCCccHHHH
Q 040855 76 CPTETSTVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYS------GSDFNYFPFGSGRRICAGIAMA 149 (205)
Q Consensus 76 ~~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~a 149 (205)
.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||++++.... ..++.++|||.|+|.|+|+++|
T Consensus 366 ~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A 445 (490)
T PLN02500 366 KALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELA 445 (490)
T ss_pred EeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHH
Confidence 9999999999999999999999999999999999999999999997542111 2356899999999999999999
Q ss_pred HHHHHHHHHHHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeee
Q 040855 150 ERMFLYSVATLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTP 196 (205)
Q Consensus 150 ~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (205)
++|++++++.|+++|+|++.++... .. .... .++.++.+++++
T Consensus 446 ~~el~~~la~ll~~f~~~~~~~~~~-~~--~~~~-~~~~~l~~~~~~ 488 (490)
T PLN02500 446 KLEMAVFIHHLVLNFNWELAEADQA-FA--FPFV-DFPKGLPIRVRR 488 (490)
T ss_pred HHHHHHHHHHHHhccEEEEcCCCcc-ee--cccc-cCCCCceEEEEe
Confidence 9999999999999999998776431 11 1122 334578887765
No 24
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=8.8e-46 Score=315.77 Aligned_cols=188 Identities=24% Similarity=0.447 Sum_probs=163.9
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCC---CCCCCcccccCChhHHHHHHhHhcCCCCCCCCCcccc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGR---DNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCP 77 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~ 77 (205)
+++||+|||+++++|++++|++||++|+|+++|++++.+. +...+.+++.++||+++|++|++|++|+++. ..|.+
T Consensus 272 ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~ 350 (463)
T PLN02774 272 ILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRKT 350 (463)
T ss_pred HHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC-ccccc
Confidence 4789999999999999999999999999999999998763 2456788999999999999999999999986 57999
Q ss_pred CCcccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHHH
Q 040855 78 TETSTVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYSV 157 (205)
Q Consensus 78 ~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l 157 (205)
.+|++++|+.||||+.|+++.+++|+||++|+||++|+|+||++++.. ....++|||.|+|+|||++||.+|+++++
T Consensus 351 ~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~l 427 (463)
T PLN02774 351 TQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE---SHNYFFLFGGGTRLCPGKELGIVEISTFL 427 (463)
T ss_pred CCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC---CCccccCcCCCCCcCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999965421 12369999999999999999999999999
Q ss_pred HHHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeee
Q 040855 158 ATLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTP 196 (205)
Q Consensus 158 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (205)
+.|+++|++++.++..... . ..+.|++++.+++++
T Consensus 428 a~Ll~~f~~~~~~~~~~~~---~-~~~~p~~g~~~~~~~ 462 (463)
T PLN02774 428 HYFVTRYRWEEVGGDKLMK---F-PRVEAPNGLHIRVSP 462 (463)
T ss_pred HHHHHhceEEECCCCcccc---C-CCCCCCCCceEEeee
Confidence 9999999999977643211 1 123367788888764
No 25
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=1.1e-45 Score=317.10 Aligned_cols=196 Identities=31% Similarity=0.532 Sum_probs=172.0
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+.+++|++++|++||++|+++++|++++++. ...+.+++.+||||+||++|++|++|+++...+|.+.+|
T Consensus 286 ~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~ 364 (489)
T PLN02936 286 MLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVED 364 (489)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCc
Confidence 4789999999999999999999999999999999999875 346788899999999999999999999998888888888
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCC--CCCCCCceeecCCCccCCccHHHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWD--YSGSDFNYFPFGSGRRICAGIAMAERMFLYSVA 158 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~ 158 (205)
+.++|+.||+|+.|.++.+++|+||++|+||++|+|+||++++.. ....+..++|||.|+|.|+|++||+++++++++
T Consensus 365 ~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la 444 (489)
T PLN02936 365 VLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALA 444 (489)
T ss_pred cccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999964421 122345899999999999999999999999999
Q ss_pred HHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeecCC
Q 040855 159 TLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPRLS 199 (205)
Q Consensus 159 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 199 (205)
.|+++|++++++++++.. ..++...++.++.+.+++|..
T Consensus 445 ~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~R~~ 483 (489)
T PLN02936 445 VLLQRLDLELVPDQDIVM--TTGATIHTTNGLYMTVSRRRV 483 (489)
T ss_pred HHHHhCeEEecCCCccce--ecceEEeeCCCeEEEEEeeeC
Confidence 999999999887754433 234666677899999998753
No 26
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=2.4e-45 Score=312.23 Aligned_cols=187 Identities=24% Similarity=0.385 Sum_probs=166.6
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhC----CCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVG----RDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHC 76 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~----~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~ 76 (205)
+++||+|||+.+++|++++|+.||++|+++++|++++++ .....+.+++.++||++|||+|++|++|+++. .+|.
T Consensus 259 ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~ 337 (452)
T PLN03141 259 MMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRK 337 (452)
T ss_pred HHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-ccee
Confidence 478999999999999999999999999999999988753 23346778889999999999999999999975 6799
Q ss_pred cCCcccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHH
Q 040855 77 PTETSTVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYS 156 (205)
Q Consensus 77 ~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~ 156 (205)
+.+|++++||.||+|+.|+++.+++|+||++|+||++|+|+||++++. .+..++|||.|+|+|+|++||.+|++++
T Consensus 338 ~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~ 413 (452)
T PLN03141 338 AMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIF 413 (452)
T ss_pred ecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999997532 3568999999999999999999999999
Q ss_pred HHHHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeec
Q 040855 157 VATLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPR 197 (205)
Q Consensus 157 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 197 (205)
++.|+++|++++.++... ...++.++.++.+.+++|
T Consensus 414 la~ll~~f~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 449 (452)
T PLN03141 414 LHHLVTRFRWVAEEDTIV-----NFPTVRMKRKLPIWVTRI 449 (452)
T ss_pred HHHHHhcCeeecCCCCee-----ecccccCCCCceEEEEeC
Confidence 999999999998765321 124667788999999998
No 27
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=1.3e-44 Score=310.21 Aligned_cols=192 Identities=26% Similarity=0.401 Sum_probs=169.0
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCC----CCCCcccccCChhHHHHHHhHhcCCCCCCCCCccc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRD----NIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHC 76 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~----~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~ 76 (205)
+++||+|||+.+++|++++|++||++|+|+++|++++++.. ...+.+++.++||++++++|++|++|+++. ..|.
T Consensus 295 ~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~ 373 (490)
T PLN02302 295 YLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFRE 373 (490)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chhc
Confidence 47899999999999999999999999999999999987642 126788899999999999999999999987 4688
Q ss_pred cCCcccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHH
Q 040855 77 PTETSTVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYS 156 (205)
Q Consensus 77 ~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~ 156 (205)
+.+|+.++|+.||+|+.|.++.+++|+||++|+||++|+|+||++.. ..+..++|||.|+|+|+|+++|..|++++
T Consensus 374 ~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~ 449 (490)
T PLN02302 374 AKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIF 449 (490)
T ss_pred ccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999643 24568999999999999999999999999
Q ss_pred HHHHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeecCCC
Q 040855 157 VATLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPRLSD 200 (205)
Q Consensus 157 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 200 (205)
++.++++|++++.++. .+.. +.....|++++.+++++|.++
T Consensus 450 la~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~~~~~~~~~~~~ 490 (490)
T PLN02302 450 LHHFLLGYRLERLNPG-CKVM--YLPHPRPKDNCLARITKVASE 490 (490)
T ss_pred HHHHHhcCeeEEcCCC-Ccce--eCCCCCCCCCceEEEEeccCC
Confidence 9999999999987642 2222 223367788999999999764
No 28
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=2.9e-44 Score=306.41 Aligned_cols=187 Identities=22% Similarity=0.394 Sum_probs=164.6
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCC---CCCCCcccccCChhHHHHHHhHhcCCCCCCCCCcccc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGR---DNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCP 77 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~ 77 (205)
+++||+|||+.+++|++++|++||++|+++++|++++.+. ....+.+++.++||++++++|++|++|+.+.. .|.+
T Consensus 272 ~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~ 350 (463)
T PLN02196 272 VIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREA 350 (463)
T ss_pred HHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceee
Confidence 4789999999999999999999999999999999988753 34578888999999999999999999999985 5888
Q ss_pred CCcccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHHH
Q 040855 78 TETSTVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYSV 157 (205)
Q Consensus 78 ~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l 157 (205)
.+|+.++||.||||+.|.++.+++|+||++|+||++|+|+||+++. .+..++|||.|+|.|+|+++|+.|+++++
T Consensus 351 ~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~l 425 (463)
T PLN02196 351 VEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLI 425 (463)
T ss_pred ccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999633 35689999999999999999999999999
Q ss_pred HHHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeee
Q 040855 158 ATLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTP 196 (205)
Q Consensus 158 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (205)
+.|+++|++++.+++ .++. +..+..|++++.++++.
T Consensus 426 a~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~~~~~~~~ 461 (463)
T PLN02196 426 HHLTTKYRWSIVGTS-NGIQ--YGPFALPQNGLPIALSR 461 (463)
T ss_pred HHHHHhcEEEEcCCC-CceE--EcccccCCCCceEEEec
Confidence 999999999987653 2332 23344577888887764
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=1.4e-43 Score=302.65 Aligned_cols=191 Identities=25% Similarity=0.403 Sum_probs=168.2
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhC---CCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCcccc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVG---RDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCP 77 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~---~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~ 77 (205)
+++||+|||+.+++|++++|++||++++++++|++++.+ .....+.+++.++||++++++|++|++|+++. ..|.+
T Consensus 275 l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~ 353 (472)
T PLN02987 275 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRA 353 (472)
T ss_pred HHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccC
Confidence 478999999999999999999999999999999998875 23446778899999999999999999999985 67889
Q ss_pred CCcccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHHH
Q 040855 78 TETSTVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYSV 157 (205)
Q Consensus 78 ~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l 157 (205)
.+|++++||.||+|+.|.++.+++|+||++|++|++|+|+||++++.. ......++|||.|+|.|+|++||..|+++++
T Consensus 354 ~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l 432 (472)
T PLN02987 354 MTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFL 432 (472)
T ss_pred CCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999975432 1234689999999999999999999999999
Q ss_pred HHHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeec
Q 040855 158 ATLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPR 197 (205)
Q Consensus 158 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 197 (205)
+.|+++|+++++++.... ...++.|..++.+++++|
T Consensus 433 a~ll~~f~~~~~~~~~~~----~~~~~~p~~~~~~~~~~r 468 (472)
T PLN02987 433 HRLVTRFSWVPAEQDKLV----FFPTTRTQKRYPINVKRR 468 (472)
T ss_pred HHHHhceEEEECCCCcee----ecccccCCCCceEEEEec
Confidence 999999999987764322 234667777899999988
No 30
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.2e-43 Score=285.51 Aligned_cols=196 Identities=30% Similarity=0.537 Sum_probs=173.3
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCC-CCcccccCChhHHHHHHhHhcCCCCCCCCCccccCC
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNI-VEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTE 79 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~ 79 (205)
++|||+.||+.+.+|++++|++||++++.+++|+.+++|++.. .+.+.+++||.|++||+||+||+||.+. ..|.+.+
T Consensus 281 ~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~-~~R~v~~ 359 (486)
T KOG0684|consen 281 LLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHS-LMRKVHE 359 (486)
T ss_pred HHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhh-HHHhhcc
Confidence 3799999999999999999999999999999999999997665 8999999999999999999999999887 6799999
Q ss_pred cccccC----eEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCC--CC--CCceeecCCCccCCccHHHHHH
Q 040855 80 TSTVGG----YTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYS--GS--DFNYFPFGSGRRICAGIAMAER 151 (205)
Q Consensus 80 ~~~~~~----~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~--~~--~~~~~~Fg~G~r~C~G~~~a~~ 151 (205)
|.++.+ |.||+|..|.++...+|+||++|++|+.|+|+||++++.+.+ +. .+.+||||+|.|.|||+.||.+
T Consensus 360 D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~ 439 (486)
T KOG0684|consen 360 DLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYL 439 (486)
T ss_pred ceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHH
Confidence 988865 999999999999999999999999999999999997765431 22 3456999999999999999999
Q ss_pred HHHHHHHHHhhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeecC
Q 040855 152 MFLYSVATLLHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPRL 198 (205)
Q Consensus 152 ~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 198 (205)
|++.++..+|++||+++.+|+....+.+ ..++.|..++.++.+.|.
T Consensus 440 eIk~~~~l~L~~fdleLid~~~P~~d~s-~~v~~P~g~v~irYK~R~ 485 (486)
T KOG0684|consen 440 EIKQFISLLLRHFDLELIDGPFPEVDYS-RMVMQPEGDVRIRYKRRP 485 (486)
T ss_pred HHHHHHHHHHHHcceeecCCCCCCCCHH-HhhcCCCCCceEEEeecC
Confidence 9999999999999999999733333333 237778889999998884
No 31
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.9e-38 Score=263.70 Aligned_cols=167 Identities=33% Similarity=0.541 Sum_probs=146.6
Q ss_pred CcccccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCCCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCc
Q 040855 1 MVVGGSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTET 80 (205)
Q Consensus 1 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 80 (205)
+++||+|||+.+++|+++.|++||+.++++++|.+. +|+.++++|++|++|+++. .+|.+.+|
T Consensus 244 ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~-~~R~~~~d 306 (411)
T COG2124 244 LLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPL-ARRVATED 306 (411)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhc-cceeccCC
Confidence 478999999999999999999999999999998764 7899999999999999999 89999999
Q ss_pred ccccCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHHHHHHHHHHHHHHH
Q 040855 81 STVGGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIAMAERMFLYSVATL 160 (205)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~l 160 (205)
++++|+.||+|+.|.++++++||||+.|++|++|+|+||. ..++|||+|.|.|+|..||++|++++++.+
T Consensus 307 ~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~l 376 (411)
T COG2124 307 VELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALARLELKVALAEL 376 (411)
T ss_pred EeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999986 478999999999999999999999999999
Q ss_pred hhhCeeeCCCCCCCCcccccceeeccCCCeeEEeeec
Q 040855 161 LHSFDWKLPEGQKVDLTEKFGIVLKLKNPLAAIPTPR 197 (205)
Q Consensus 161 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 197 (205)
+++|++....+ . ..........+..+..+.++.+
T Consensus 377 l~r~~~~~~~~-~--~~~~~~~~~~~~g~~~l~v~~~ 410 (411)
T COG2124 377 LRRFPLLLLAE-P--PPLVRRPTLVPRGGERLPVRRR 410 (411)
T ss_pred HHhCchhhcCC-C--CCccccccccCCCcceeeeecC
Confidence 99999876665 2 1122233344444555555544
No 32
>PLN02648 allene oxide synthase
Probab=100.00 E-value=3.5e-37 Score=262.92 Aligned_cols=164 Identities=21% Similarity=0.331 Sum_probs=141.4
Q ss_pred cccchHHHHHHHHHHHHhhCHH-HHHHHHHHHHHHhCC-CCCCCcccccCChhHHHHHHhHhcCCCCCCCCCccccCCcc
Q 040855 4 GGSDTTSNSTEFAMAEMMNKPE-VIKRAQQELDEVVGR-DNIVEESHIYKLPYLFAVMKETLRLHPALPLLVPHCPTETS 81 (205)
Q Consensus 4 ag~~tt~~~l~~~~~~l~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~~~~l~~l~~~i~E~lRl~~~~~~~~~r~~~~~~ 81 (205)
++++|++++++|++++|++||+ ++++|++|++++++. ....+.+++.+|||+++|++|++|++|+++... |.+.+|+
T Consensus 283 ~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~ 361 (480)
T PLN02648 283 NAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDF 361 (480)
T ss_pred HhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCE
Confidence 4566667899999999999995 999999999998863 346788899999999999999999999999854 5677888
Q ss_pred ccc----CeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeec---------CCCccCCccHHH
Q 040855 82 TVG----GYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYSGSDFNYFPF---------GSGRRICAGIAM 148 (205)
Q Consensus 82 ~~~----~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~ 148 (205)
.++ ||.||+|+.|+++.+.+|+||++|+||++|+|+||++++.. ....+++| |.|+|.|+|++|
T Consensus 362 ~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~ 438 (480)
T PLN02648 362 VIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDF 438 (480)
T ss_pred EEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHH
Confidence 885 79999999999999999999999999999999999865321 11234444 667899999999
Q ss_pred HHHHHHHHHHHHhhhCe-eeCCCC
Q 040855 149 AERMFLYSVATLLHSFD-WKLPEG 171 (205)
Q Consensus 149 a~~~~~~~l~~ll~~f~-~~~~~~ 171 (205)
|+.|++++++.|+++|+ |++.++
T Consensus 439 A~~e~~~~la~Ll~~f~~~~l~~~ 462 (480)
T PLN02648 439 VVLVARLFVAELFLRYDSFEIEVD 462 (480)
T ss_pred HHHHHHHHHHHHHHHhCEEeecCC
Confidence 99999999999999998 998766
No 33
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and metabolism]
Probab=68.84 E-value=8.5 Score=31.58 Aligned_cols=71 Identities=17% Similarity=0.257 Sum_probs=44.9
Q ss_pred HHHHHHhHhcCCCCC---CCCCccccCCcccc----cCeEecCCCEEEeechhhhcCCCCCCCCCCCCCCCcCCCCCCCC
Q 040855 55 LFAVMKETLRLHPAL---PLLVPHCPTETSTV----GGYTVPKGARVFVNVWAIHRDPSIWKNPLEFNPERFLNSKWDYS 127 (205)
Q Consensus 55 l~~~i~E~lRl~~~~---~~~~~r~~~~~~~~----~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~ 127 (205)
-+.++..+..+.||. |+.+.-.+++|..+ -+-+|..||.|.++
T Consensus 275 ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~------------------------------ 324 (361)
T COG1759 275 GERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG------------------------------ 324 (361)
T ss_pred HHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC------------------------------
Confidence 346777788899874 44444555666544 24567777766433
Q ss_pred CCCCceeecCCCccCCccHHHHHHHHHHHHH
Q 040855 128 GSDFNYFPFGSGRRICAGIAMAERMFLYSVA 158 (205)
Q Consensus 128 ~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~ 158 (205)
+++++++-||- -+-.|+.+|. |+|.++-
T Consensus 325 GspYs~l~~~~--pms~GrRIA~-EIk~A~e 352 (361)
T COG1759 325 GSPYSNLYWGE--PMSTGRRIAR-EIKEAIE 352 (361)
T ss_pred CCcchhhhcCC--CcchhhHHHH-HHHHHHH
Confidence 13445555553 3788999998 8877653
No 34
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=59.40 E-value=2.4 Score=32.40 Aligned_cols=43 Identities=21% Similarity=0.244 Sum_probs=32.1
Q ss_pred ChhHHHHHHhHhcCCCCCCCCCccccCCcccccCeEecCCCEEEe
Q 040855 52 LPYLFAVMKETLRLHPALPLLVPHCPTETSTVGGYTVPKGARVFV 96 (205)
Q Consensus 52 l~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~~~~ip~g~~v~~ 96 (205)
-....|||.|.+-+...... .-...+|+.++|..||+|+.+..
T Consensus 52 ~n~I~A~V~~~qtv~~Gs~v--rlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 52 KNTIRAVVDGTQTVVDGSRV--RLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCeEEEEEecceEEeCCCEE--EEEEcCceEECCEEeCCCCEEEE
Confidence 34566899999877665532 33556788999999999998865
No 35
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=45.23 E-value=17 Score=21.88 Aligned_cols=8 Identities=50% Similarity=1.037 Sum_probs=6.0
Q ss_pred CCCCcCCC
Q 040855 115 NPERFLNS 122 (205)
Q Consensus 115 ~p~Rfl~~ 122 (205)
||||||.-
T Consensus 44 DPERWLP~ 51 (59)
T PF08492_consen 44 DPERWLPK 51 (59)
T ss_pred CccccCch
Confidence 78888853
No 36
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=43.83 E-value=20 Score=25.64 Aligned_cols=24 Identities=21% Similarity=0.234 Sum_probs=17.3
Q ss_pred cCCccHHHHHHHHHHHHHHHhhhC
Q 040855 141 RICAGIAMAERMFLYSVATLLHSF 164 (205)
Q Consensus 141 r~C~G~~~a~~~~~~~l~~ll~~f 164 (205)
-.|.|+.||...+-.++.+|+..-
T Consensus 18 yN~~gKKFsE~QiN~FIs~lItsP 41 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLITSP 41 (148)
T ss_dssp EETTS----HHHHHHHHHHHHHS-
T ss_pred ecccchHHHHHHHHHHHHHHhcCC
Confidence 589999999999999999999753
No 37
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=43.40 E-value=27 Score=20.85 Aligned_cols=22 Identities=14% Similarity=0.296 Sum_probs=17.0
Q ss_pred HHHHHHhhCHHHHHHHHHHHHH
Q 040855 15 FAMAEMMNKPEVIKRAQQELDE 36 (205)
Q Consensus 15 ~~~~~l~~~p~~~~~l~~Ei~~ 36 (205)
-.+.+|.+||++.+++.+.=.+
T Consensus 4 ~iV~YLv~nPevl~kl~~g~as 25 (57)
T PF05952_consen 4 EIVNYLVQNPEVLEKLKEGEAS 25 (57)
T ss_pred HHHHHHHHChHHHHHHHcCCee
Confidence 3577899999999999864333
No 38
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=38.13 E-value=55 Score=21.59 Aligned_cols=28 Identities=25% Similarity=0.366 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 040855 11 NSTEFAMAEMMNKPEVIKRAQQELDEVV 38 (205)
Q Consensus 11 ~~l~~~~~~l~~~p~~~~~l~~Ei~~~~ 38 (205)
..+.|.+.-.-+.|+-.+.+.+||+++-
T Consensus 54 ~~lgy~v~tFnDcpeA~~eL~~eI~eAK 81 (91)
T PF08285_consen 54 FTLGYGVATFNDCPEAAKELQKEIKEAK 81 (91)
T ss_pred HHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence 4567777778889999999999998864
No 39
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=36.16 E-value=14 Score=27.57 Aligned_cols=36 Identities=28% Similarity=0.558 Sum_probs=25.3
Q ss_pred CCCCCCCcCCCCCCCCCCCCceeecCCCccCCccHH
Q 040855 112 LEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGIA 147 (205)
Q Consensus 112 ~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~ 147 (205)
.+|+|++|=+-=.....+..+.+-|..|+=.|-|..
T Consensus 35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK 70 (185)
T COG2101 35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK 70 (185)
T ss_pred CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence 478888884322222334568899999999999964
No 40
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=35.89 E-value=10 Score=32.31 Aligned_cols=21 Identities=24% Similarity=0.450 Sum_probs=15.8
Q ss_pred cCCcccccCeEecCCCEEEee
Q 040855 77 PTETSTVGGYTVPKGARVFVN 97 (205)
Q Consensus 77 ~~~~~~~~~~~ip~g~~v~~~ 97 (205)
..+|+.++|..||+||.|...
T Consensus 278 Lle~~~v~~~~ipkgt~l~g~ 298 (410)
T TIGR03779 278 LLEPIQAGDLVIPKGTVLYGT 298 (410)
T ss_pred EcCceeeCCEEecCCCEEEEE
Confidence 345667789999999987544
No 41
>PRK06789 flagellar motor switch protein; Validated
Probab=33.77 E-value=39 Score=21.37 Aligned_cols=41 Identities=7% Similarity=0.066 Sum_probs=31.2
Q ss_pred HHHhHhcCCCCCCCCCccccCC--cccccCeEecCCCEEEeec
Q 040855 58 VMKETLRLHPALPLLVPHCPTE--TSTVGGYTVPKGARVFVNV 98 (205)
Q Consensus 58 ~i~E~lRl~~~~~~~~~r~~~~--~~~~~~~~ip~g~~v~~~~ 98 (205)
-++|.+.+.+..-..+.+...+ |+.++|..|.+|..|.++-
T Consensus 21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~ 63 (74)
T PRK06789 21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG 63 (74)
T ss_pred EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence 4678888888877666666666 4566999999999887653
No 42
>PF14550 Peptidase_U35_2: Putative phage protease XkdF
Probab=30.66 E-value=39 Score=23.63 Aligned_cols=22 Identities=36% Similarity=0.531 Sum_probs=17.8
Q ss_pred cccCCcccccCeEecCCCEEEe
Q 040855 75 HCPTETSTVGGYTVPKGARVFV 96 (205)
Q Consensus 75 r~~~~~~~~~~~~ip~g~~v~~ 96 (205)
-+.+.|..++|-.||+|++|+.
T Consensus 71 ~I~~~d~~~~g~~i~~GtWv~~ 92 (122)
T PF14550_consen 71 YIAPEDMEIGGETIPKGTWVVG 92 (122)
T ss_pred EecCCCcccCCeeecceEEEEE
Confidence 3556688899999999999954
No 43
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=30.25 E-value=16 Score=27.29 Aligned_cols=35 Identities=26% Similarity=0.611 Sum_probs=24.8
Q ss_pred CCCCCCCcCCCCCCCCCCCCceeecCCCccCCccH
Q 040855 112 LEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGI 146 (205)
Q Consensus 112 ~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~ 146 (205)
.+|+|+||-.--.....+.-..+-|+.|+=.|.|.
T Consensus 29 ~eY~P~~fpgli~Rl~~Pk~t~lIF~SGKiv~tGa 63 (174)
T cd04518 29 AEYNPDQFPGLVYRLEDPKIAALIFRSGKMVCTGA 63 (174)
T ss_pred cEECCCcCcEEEEEccCCcEEEEEECCCeEEEEcc
Confidence 57899998543222233455788999999999986
No 44
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=29.61 E-value=50 Score=24.57 Aligned_cols=55 Identities=22% Similarity=0.316 Sum_probs=32.2
Q ss_pred CCCCCCCcCCCCCCCCCCCCceeecCCCccCCccH---HHHHHHHHHHHHHHhhhCeee
Q 040855 112 LEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAGI---AMAERMFLYSVATLLHSFDWK 167 (205)
Q Consensus 112 ~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~---~~a~~~~~~~l~~ll~~f~~~ 167 (205)
.+|+|+||-.--.....+.-..+-|+.|+=.|.|. .=|...++. ++.+|++..+.
T Consensus 29 ~~YePe~fpgli~R~~~P~~t~lIf~sGKivitGaks~~~~~~a~~~-~~~~L~~~g~~ 86 (174)
T cd00652 29 AEYNPKRFPGVIMRLREPKTTALIFSSGKMVITGAKSEEDAKLAARK-YARILQKLGFP 86 (174)
T ss_pred cEECCCccceEEEEcCCCcEEEEEECCCEEEEEecCCHHHHHHHHHH-HHHHHHHcCCC
Confidence 57888888542222223455788899999999983 223333322 33445555544
No 45
>KOG3302 consensus TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=27.04 E-value=24 Score=26.75 Aligned_cols=34 Identities=29% Similarity=0.582 Sum_probs=22.6
Q ss_pred CCCCCCCcCCCCCCCCCCCCceeecCCCccCCcc
Q 040855 112 LEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAG 145 (205)
Q Consensus 112 ~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G 145 (205)
.+|+|+||-.--.....+.-...-|++|+=.|-|
T Consensus 50 ~ey~Pk~~~aVimrir~P~~ta~I~ssGKi~ctg 83 (200)
T KOG3302|consen 50 AEYNPKRFAAVIMRIRSPRTTALIFSSGKIVCTG 83 (200)
T ss_pred cccCcccccEEEEEEcCCceEEEEecCCcEEEec
Confidence 5789999853211122234466789999999997
No 46
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=27.00 E-value=1.3e+02 Score=19.36 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=27.5
Q ss_pred ccchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 040855 5 GSDTTSNSTEFAMAEMMNKPEVIKRAQQELDEVV 38 (205)
Q Consensus 5 g~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~ 38 (205)
-+..++....-.+.+-++||+..+++.+.+.+-+
T Consensus 45 Ky~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL 78 (87)
T PF14129_consen 45 KYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL 78 (87)
T ss_pred HcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 3556777888888889999999999999887654
No 47
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=26.56 E-value=29 Score=20.49 Aligned_cols=10 Identities=50% Similarity=1.112 Sum_probs=8.4
Q ss_pred ecCCCccCCc
Q 040855 135 PFGSGRRICA 144 (205)
Q Consensus 135 ~Fg~G~r~C~ 144 (205)
+||-|.|.|-
T Consensus 13 kfg~GsrsC~ 22 (56)
T KOG3506|consen 13 KFGQGSRSCR 22 (56)
T ss_pred ccCCCCccee
Confidence 5999999885
No 48
>PF14824 Sirohm_synth_M: Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=25.21 E-value=1.1e+02 Score=15.72 Aligned_cols=15 Identities=13% Similarity=0.514 Sum_probs=11.4
Q ss_pred CHHHHHHHHHHHHHH
Q 040855 23 KPEVIKRAQQELDEV 37 (205)
Q Consensus 23 ~p~~~~~l~~Ei~~~ 37 (205)
.|.+..++|+||++.
T Consensus 15 sP~la~~iR~~ie~~ 29 (30)
T PF14824_consen 15 SPRLARLIRKEIERL 29 (30)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHh
Confidence 588888999998764
No 49
>PF14483 Cut8_M: Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=24.64 E-value=1e+02 Score=16.63 Aligned_cols=21 Identities=10% Similarity=0.278 Sum_probs=14.4
Q ss_pred HHHHHHHHHh-hCHHHHHHHHH
Q 040855 12 STEFAMAEMM-NKPEVIKRAQQ 32 (205)
Q Consensus 12 ~l~~~~~~l~-~~p~~~~~l~~ 32 (205)
.+...+..++ +||++++.+++
T Consensus 14 qL~~lL~~l~~~HPei~~~i~~ 35 (38)
T PF14483_consen 14 QLQSLLQSLCERHPEIQQEIRS 35 (38)
T ss_dssp HHHHHHHHHHHHSTHHHHHHHT
T ss_pred HHHHHHHHHHHhChhHHHHHHh
Confidence 4555566665 78998887764
No 50
>PF15300 INT_SG_DDX_CT_C: INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=24.50 E-value=42 Score=20.65 Aligned_cols=15 Identities=20% Similarity=0.425 Sum_probs=12.1
Q ss_pred ChhHHHHHHhHhcCC
Q 040855 52 LPYLFAVMKETLRLH 66 (205)
Q Consensus 52 l~~l~~~i~E~lRl~ 66 (205)
..+++.+|+|+.|+.
T Consensus 40 ~~fv~~~IkEA~RFk 54 (65)
T PF15300_consen 40 KQFVEMIIKEAARFK 54 (65)
T ss_pred HHHHHHHHHHHHHHH
Confidence 357889999999874
No 51
>PF02663 FmdE: FmdE, Molybdenum formylmethanofuran dehydrogenase operon ; InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase []. This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=22.44 E-value=84 Score=21.92 Aligned_cols=22 Identities=32% Similarity=0.610 Sum_probs=17.1
Q ss_pred cCCccHHHHHHHHHHHHHHHhh
Q 040855 141 RICAGIAMAERMFLYSVATLLH 162 (205)
Q Consensus 141 r~C~G~~~a~~~~~~~l~~ll~ 162 (205)
|.|||--++......++..|-.
T Consensus 5 H~Cpgl~~G~r~~~~a~~~l~~ 26 (131)
T PF02663_consen 5 HLCPGLALGYRMAKYALEELGI 26 (131)
T ss_dssp S--HHHHHHHHHHHHHHHHHTS
T ss_pred CcCccHHHHHHHHHHHHHHcCC
Confidence 8999999999999888887744
No 52
>PRK00394 transcription factor; Reviewed
Probab=22.20 E-value=28 Score=26.03 Aligned_cols=34 Identities=29% Similarity=0.642 Sum_probs=24.1
Q ss_pred CCCCCCCcCCCCCCCCCCCCceeecCCCccCCcc
Q 040855 112 LEFNPERFLNSKWDYSGSDFNYFPFGSGRRICAG 145 (205)
Q Consensus 112 ~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G 145 (205)
.+|+|+||-.--.....+.-..+-|+.|+=.|.|
T Consensus 28 ~eYePe~fpgli~Rl~~Pk~t~lIf~sGKiv~tG 61 (179)
T PRK00394 28 AEYNPEQFPGLVYRLEDPKIAALIFRSGKVVCTG 61 (179)
T ss_pred ceeCcccCceEEEEecCCceEEEEEcCCcEEEEc
Confidence 5789998854322223345578889999999998
No 53
>PRK05933 type III secretion system protein; Validated
Probab=20.48 E-value=89 Score=25.89 Aligned_cols=43 Identities=19% Similarity=0.149 Sum_probs=33.1
Q ss_pred HHHHHhHhcCCCCCCCCCcccc---CCcccccCeEecCCCEEEeec
Q 040855 56 FAVMKETLRLHPALPLLVPHCP---TETSTVGGYTVPKGARVFVNV 98 (205)
Q Consensus 56 ~~~i~E~lRl~~~~~~~~~r~~---~~~~~~~~~~ip~g~~v~~~~ 98 (205)
..-|+|.++|.+....-+-+.. .-|+.++|..|.+|..|+++-
T Consensus 318 ~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVdd 363 (372)
T PRK05933 318 SLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALGD 363 (372)
T ss_pred cccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEECC
Confidence 4568999999998876665543 336777999999999997653
Done!