Query 040861
Match_columns 199
No_of_seqs 205 out of 1322
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 20:27:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040861.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040861hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lya_A Cathepsin D; lysosomal 99.9 5E-24 1.7E-28 155.5 7.2 80 89-199 9-93 (97)
2 1b5f_A Protein (cardosin A); h 99.8 6.5E-20 2.2E-24 152.5 7.2 84 85-199 4-92 (239)
3 2apr_A Rhizopuspepsin; hydrola 99.8 1.5E-19 5.2E-24 156.2 9.5 83 88-199 10-93 (325)
4 3c9x_A Trichoderma reesei aspa 99.8 1E-19 3.5E-24 157.5 7.6 85 88-199 10-95 (329)
5 1oew_A Endothiapepsin; hydrola 99.8 1.4E-19 4.7E-24 156.7 8.1 83 89-199 11-94 (329)
6 3vla_A EDGP; extracellular, in 99.8 2.2E-19 7.4E-24 160.7 7.6 89 89-199 16-116 (413)
7 3psg_A Pepsinogen; hydrolase(a 99.8 2.9E-19 9.9E-24 157.5 7.7 82 89-199 52-134 (370)
8 3k1w_A Renin; protease, altern 99.8 3.1E-19 1.1E-23 154.4 7.0 84 85-199 9-98 (341)
9 1dpj_A Proteinase A; proteinas 99.8 7.2E-19 2.4E-23 151.9 8.0 80 89-199 9-91 (329)
10 2x0b_A Renin; hydrolase-hormon 99.8 3.7E-19 1.3E-23 157.8 6.3 80 89-199 57-141 (383)
11 2bju_A Plasmepsin II; aspartic 99.8 1.2E-18 4.1E-23 157.9 9.2 83 86-199 130-216 (453)
12 3cms_A Chymosin B; hydrolase, 99.8 5.4E-19 1.9E-23 152.4 6.1 80 89-199 10-92 (323)
13 1mpp_A Pepsin; hydrolase(acid 99.7 2.5E-18 8.4E-23 150.3 9.1 80 89-199 14-97 (361)
14 3fv3_A SAPP1P-secreted asparti 99.7 3.3E-18 1.1E-22 148.0 9.7 84 86-199 5-94 (339)
15 4aa9_A Chymosin; hydrolase, as 99.7 8.4E-19 2.9E-23 150.6 5.7 80 89-199 7-89 (320)
16 1tzs_A Cathepsin E; hydrolase, 99.7 2E-18 7E-23 150.5 8.1 80 89-199 19-101 (351)
17 1am5_A Pepsin, acid proteinase 99.7 2E-18 6.8E-23 148.8 6.6 80 89-199 8-90 (324)
18 2qzx_A Candidapepsin-5; aspart 99.7 6.2E-18 2.1E-22 146.7 9.3 92 87-199 6-100 (342)
19 1qdm_A Prophytepsin; aspartic 99.7 4.2E-18 1.4E-22 155.1 8.4 80 89-199 48-131 (478)
20 1htr_B Gastricsin; aspartyl pr 99.7 2.9E-18 1E-22 148.1 6.8 79 90-199 9-90 (329)
21 2ewy_A Beta-secretase 2; BACE2 99.7 6.3E-18 2.2E-22 148.6 8.3 76 91-199 11-87 (383)
22 3aup_A SBG7S, BG, basic 7S glo 99.7 1E-17 3.5E-22 148.7 9.7 89 89-199 17-117 (403)
23 2qp8_A Beta-secretase 1; BACE1 99.7 1.1E-17 3.8E-22 147.9 8.9 75 92-199 20-95 (395)
24 1j71_A Candidapepsin, aspartic 99.7 1.1E-17 3.6E-22 144.9 7.6 92 87-199 6-100 (334)
25 3pvk_A Candidapepsin-2; hydrol 99.7 2.4E-17 8.2E-22 142.6 9.7 92 87-199 6-100 (342)
26 1miq_A Plasmepsin; aspartic pr 99.7 3.5E-18 1.2E-22 150.8 4.5 80 89-199 58-140 (375)
27 3qvc_A Histo-aspartic protease 99.7 8.2E-18 2.8E-22 152.2 6.8 83 86-199 129-215 (451)
28 3lpj_A Beta-secretase 1; alzhe 99.7 3.8E-17 1.3E-21 147.2 8.2 77 90-199 71-148 (455)
29 3vf3_A Beta-secretase 1; struc 99.7 4.4E-17 1.5E-21 144.2 8.2 75 92-199 27-102 (402)
30 1ibq_A Aspergillopepsin; aspar 99.6 1.9E-16 6.3E-21 136.8 8.1 80 89-199 10-90 (325)
31 1izd_A Aspartic proteinase; su 99.6 1.8E-16 6.1E-21 136.9 6.4 79 90-199 12-91 (323)
32 1wkr_A Polyporopepsin; hydrola 99.6 5.5E-16 1.9E-20 134.3 8.7 74 86-199 5-78 (340)
33 1bxo_A Protein (penicillopepsi 99.6 8.9E-17 3E-21 138.7 3.5 80 89-199 11-91 (323)
34 1yg9_A Aspartic protease BLA G 99.6 1.1E-15 3.9E-20 132.2 5.3 79 89-199 13-94 (330)
35 1t6e_X Xylanase inhibitor; two 99.5 7.4E-15 2.5E-19 129.4 3.6 80 89-199 10-103 (381)
36 2hs1_A HIV-1 protease; ultra-h 84.8 0.91 3.1E-05 32.3 3.7 25 96-122 10-34 (99)
37 1fmb_A EIAV protease; hydrolas 84.2 1.2 4E-05 32.0 4.1 25 96-122 10-34 (104)
38 3ec0_A Protease; HIV-2, inhibi 80.5 1.5 5.3E-05 31.2 3.5 24 96-121 10-33 (99)
39 3liy_A Protease; hydrolase, hy 76.8 2.4 8.2E-05 31.0 3.7 28 97-124 13-43 (116)
40 2hah_A Protease, retropepsin; 74.1 3.4 0.00012 30.2 3.9 25 95-122 15-39 (116)
41 2i1a_A DNA damage-inducible pr 73.1 3.6 0.00012 30.4 4.0 29 94-124 26-54 (148)
42 3sqf_A Protease; folded monome 67.2 6.6 0.00023 28.6 4.1 27 96-124 11-37 (114)
43 3s8i_A Protein DDI1 homolog 1; 65.3 6.1 0.00021 29.7 3.8 29 94-124 24-52 (148)
44 3slz_A GAG-Pro-POL polyprotein 54.8 13 0.00045 27.6 3.9 25 95-121 23-47 (132)
45 3ka2_A [L-Ala51;Gly51']HIV-1 p 50.9 13 0.00044 29.7 3.5 24 96-121 10-33 (203)
46 2rsp_A RSV protease; hydrolase 49.4 15 0.00051 27.0 3.5 19 105-123 29-47 (124)
47 3ka2_A [L-Ala51;Gly51']HIV-1 p 33.8 35 0.0012 27.2 3.5 25 95-121 113-137 (203)
48 1lya_B Cathepsin D; lysosomal 27.9 61 0.0021 25.2 4.1 27 98-124 107-137 (241)
49 3c9x_A Trichoderma reesei aspa 27.6 45 0.0016 27.5 3.5 26 99-124 202-230 (329)
50 1oew_A Endothiapepsin; hydrola 24.3 66 0.0023 26.4 3.9 27 98-124 200-229 (329)
51 1b5f_A Protein (cardosin A); h 23.0 46 0.0016 26.2 2.5 26 99-124 197-227 (239)
52 1ibq_A Aspergillopepsin; aspar 22.4 65 0.0022 26.5 3.4 27 98-124 196-225 (325)
No 1
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.90 E-value=5e-24 Score=155.51 Aligned_cols=80 Identities=31% Similarity=0.520 Sum_probs=71.1
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CC----CCCCCCCCCccCCCccccCCCCCCCCccccccccccc
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CS----KCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLC 163 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~----~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C 163 (199)
++.+.+|+++|.||||+|+|.|+|||||+++||+|. |. .|.. ++.|||++|+||+.+
T Consensus 9 n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~-----------~~~y~p~~SsT~~~~------- 70 (97)
T 1lya_A 9 NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWI-----------HHKYNSDKSSTYVKN------- 70 (97)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHT-----------SCCBCGGGCTTCEEE-------
T ss_pred ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCC-----------CCCCCchhCCCceeC-------
Confidence 467789999999999999999999999999999999 86 4643 468999999999983
Q ss_pred cCCCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 164 AHRNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 164 ~~~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+ +.|++++|+|+
T Consensus 71 -----------~~~~~i~Y-g~Gs-~~G~~~~Dtv~ 93 (97)
T 1lya_A 71 -----------GTSFDIHY-GSGS-LSGYLSQDTVS 93 (97)
T ss_dssp -----------EEEEEEEC-SSCE-EEEEEEEEEEE
T ss_pred -----------CCcEEEEE-CCcE-EEEEEEEEEEE
Confidence 58999999 9887 88999999984
No 2
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.79 E-value=6.5e-20 Score=152.52 Aligned_cols=84 Identities=29% Similarity=0.510 Sum_probs=72.2
Q ss_pred eeee-ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CC---CCCCCCCCCccCCCccccCCCCCCCCccccccc
Q 040861 85 TLRI-SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CS---KCAPTQGSAYASDFELSIYNPEVSSTSKKVTCN 159 (199)
Q Consensus 85 ~~~~-~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~---~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~ 159 (199)
.+++ ++.+.+|+++|.||||+|++.|+|||||+++||+|. |. .|.. ++.|||++|+||+..
T Consensus 4 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~-----------~~~y~~~~SsT~~~~--- 69 (239)
T 1b5f_A 4 VVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRA-----------HSMYESSDSSTYKEN--- 69 (239)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHT-----------SCCBCGGGCTTCEEE---
T ss_pred eeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCC-----------CCCCCCccCCCeeeC---
Confidence 3444 567789999999999999999999999999999999 86 4643 468999999999873
Q ss_pred cccccCCCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 160 NLLCAHRNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 160 s~~C~~~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| ++|+ +.|.+++|+|+
T Consensus 70 ---------------~~~~~i~Y-g~Gs-~~G~~~~D~v~ 92 (239)
T 1b5f_A 70 ---------------GTFGAIIY-GTGS-ITGFFSQDSVT 92 (239)
T ss_dssp ---------------EEEEEEEC-SSCE-EEEEEEEEEEE
T ss_pred ---------------CcEEEEEE-CCCc-EEEEEEEEEEE
Confidence 58899999 8876 78999999974
No 3
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=99.79 E-value=1.5e-19 Score=156.18 Aligned_cols=83 Identities=34% Similarity=0.585 Sum_probs=73.8
Q ss_pred eccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccCC
Q 040861 88 ISSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHR 166 (199)
Q Consensus 88 ~~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~ 166 (199)
....+.+|+++|.||||+|++.|+|||||+++||+|. |..| .+. ++.|||++|+||+.
T Consensus 10 ~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~~---------~~~y~~~~SsT~~~----------- 68 (325)
T 2apr_A 10 DYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GSG---------QTKYDPNQSSTYQA----------- 68 (325)
T ss_dssp EETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CTT---------SCCBCGGGCTTCEE-----------
T ss_pred ecCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hcC---------CCCCCcccCCCeee-----------
Confidence 4566789999999999999999999999999999999 9888 322 46999999999987
Q ss_pred CCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 167 NRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 167 ~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
..|.|.+.| +||+.+.|.+++|+|+
T Consensus 69 -------~~~~~~i~Y-g~Gs~~~G~~~~D~v~ 93 (325)
T 2apr_A 69 -------DGRTWSISY-GDGSSASGILAKDNVN 93 (325)
T ss_dssp -------EEEEEEEEC-TTSCEEEEEEEEEEEE
T ss_pred -------CCCEEEEEE-CCCCCEEEEEEEEEEE
Confidence 258999999 9998899999999974
No 4
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=99.79 E-value=1e-19 Score=157.54 Aligned_cols=85 Identities=36% Similarity=0.468 Sum_probs=73.9
Q ss_pred eccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccCC
Q 040861 88 ISSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHR 166 (199)
Q Consensus 88 ~~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~ 166 (199)
..+.+.+|+++|.||||+|++.|+|||||+++||+|. |..|..+ .++.|||++|+||+.++
T Consensus 10 ~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~---------~~~~y~~~~SsT~~~~~--------- 71 (329)
T 3c9x_A 10 SDSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSAT---------GHAIYTPSKSSTSKKVS--------- 71 (329)
T ss_dssp SSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHT---------TSCCBCGGGCTTCEECT---------
T ss_pred CCCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccC---------CCCcCCcccCcCceEcC---------
Confidence 3456678999999999999999999999999999999 9876422 24699999999999854
Q ss_pred CCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 167 NRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 167 ~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+.+.|.+++|+|+
T Consensus 72 --------~~~~~i~Y-g~Gs~~~G~~~~D~v~ 95 (329)
T 3c9x_A 72 --------GASWSISY-GDGSSSSGDVYTDKVT 95 (329)
T ss_dssp --------TCBEEEEC-TTSCEEEEEEEEEEEE
T ss_pred --------CCeEEEEe-CCCCcEEEEEEEEEEE
Confidence 58999999 9998899999999974
No 5
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=99.79 E-value=1.4e-19 Score=156.68 Aligned_cols=83 Identities=31% Similarity=0.459 Sum_probs=72.8
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccCCC
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHRN 167 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~~ 167 (199)
.+.+.+|+++|.||||+|++.|+|||||+++||+|. |..|.. .++.|||++|+||+.+.
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~----------~~~~y~~~~SsT~~~~~---------- 70 (329)
T 1oew_A 11 DSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV----------XQTIYTPSKSTTAKLLS---------- 70 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-----------CCCBCGGGCTTCEEEE----------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc----------ccCccCCccCccceecC----------
Confidence 345678999999999999999999999999999999 987642 14699999999999864
Q ss_pred CCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 168 RCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 168 ~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+.+.|.+++|+|+
T Consensus 71 -------~~~~~i~Y-g~Gs~~~G~~~~D~v~ 94 (329)
T 1oew_A 71 -------GATWSISY-GDGSSSSGDVYTDTVS 94 (329)
T ss_dssp -------EEEEEEEC-TTSCEEEEEEEEEEEE
T ss_pred -------CCeEEEEe-CCCCcEEEEEEEEEEE
Confidence 58999999 9998899999999974
No 6
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=99.78 E-value=2.2e-19 Score=160.67 Aligned_cols=89 Identities=25% Similarity=0.382 Sum_probs=73.9
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccCCC
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHRN 167 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~~ 167 (199)
+..+.+||++|+||||||+|.|+|||||+++||||+ | .+|+||+.++|.++.|....
T Consensus 16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c----------------------~~Sst~~~v~C~s~~C~~~~ 73 (413)
T 3vla_A 16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN----------------------YVSSTYRPVRCRTSQCSLSG 73 (413)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS----------------------CCCTTCEECBTTSHHHHHTT
T ss_pred cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC----------------------CCCCCcCccCCCcccccccc
Confidence 344578999999999999999999999999999998 3 26899999999999998652
Q ss_pred --CC---CC------CCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 168 --RC---PG------TFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 168 --~C---~~------~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.| .. .++.|.|.+.|++|++.+.|+|++|+|+
T Consensus 74 ~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~ 116 (413)
T 3vla_A 74 SIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVS 116 (413)
T ss_dssp CCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEE
T ss_pred cCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEE
Confidence 23 21 1357999999933788999999999985
No 7
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=99.77 E-value=2.9e-19 Score=157.52 Aligned_cols=82 Identities=33% Similarity=0.497 Sum_probs=71.5
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccCCC
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHRN 167 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~~ 167 (199)
++++.+||++|.||||||+|.|+|||||+++||+|. |..|. |..++.|||++|+||+..
T Consensus 52 n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~---------C~~~~~y~~~~SsT~~~~----------- 111 (370)
T 3psg_A 52 NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLA---------CSDHNQFNPDDSSTFEAT----------- 111 (370)
T ss_dssp GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGG---------GTTSCCBCGGGCTTCEEE-----------
T ss_pred eccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcc---------cCCCCCCCCccCcCcEEC-----------
Confidence 678889999999999999999999999999999999 96431 113579999999999983
Q ss_pred CCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 168 RCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 168 ~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| ++|+ +.|++++|+|+
T Consensus 112 -------~~~~~i~Y-g~Gs-~~G~~~~Dtv~ 134 (370)
T 3psg_A 112 -------SQELSITY-GTGS-MTGILGYDTVQ 134 (370)
T ss_dssp -------EEEEEEES-SSCE-EEEEEEEEEEE
T ss_pred -------CcEEEEEe-CCce-EEEEEEEEEEe
Confidence 58999999 8876 89999999974
No 8
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=99.77 E-value=3.1e-19 Score=154.43 Aligned_cols=84 Identities=31% Similarity=0.568 Sum_probs=72.9
Q ss_pred eeee-ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CC----CCCCCCCCCccCCCccccCCCCCCCCcccccc
Q 040861 85 TLRI-SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CS----KCAPTQGSAYASDFELSIYNPEVSSTSKKVTC 158 (199)
Q Consensus 85 ~~~~-~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~----~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C 158 (199)
.+++ ++.+.+||++|.||||||++.|+|||||+++||+|. |. .|. .++.|||++|+||+.
T Consensus 9 ~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~-----------~~~~y~~~~SsT~~~--- 74 (341)
T 3k1w_A 9 SVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACV-----------YHKLFDASDSSSYKH--- 74 (341)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHH-----------TSCCBCGGGCTTCEE---
T ss_pred cccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCccc-----------CCCCCCCCcCcCeeE---
Confidence 3444 677889999999999999999999999999999999 87 353 246999999999987
Q ss_pred ccccccCCCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 159 NNLLCAHRNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 159 ~s~~C~~~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
..|.|.+.| ++|+ +.|.+++|+|+
T Consensus 75 ---------------~~~~~~i~Y-g~gs-~~G~~~~D~v~ 98 (341)
T 3k1w_A 75 ---------------NGTELTLRY-STGT-VSGFLSQDIIT 98 (341)
T ss_dssp ---------------EEEEEEEEE-TTEE-EEEEEEEEEEE
T ss_pred ---------------CCCEEEEEE-CCcE-EEEEEEEEEEE
Confidence 368999999 8876 89999999974
No 9
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=99.76 E-value=7.2e-19 Score=151.91 Aligned_cols=80 Identities=35% Similarity=0.610 Sum_probs=70.8
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCC--CCCCCCCCccCCCccccCCCCCCCCccccccccccccC
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSK--CAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAH 165 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~--C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~ 165 (199)
++.+.+|+++|.||||+|++.|+|||||+++||+|. |.. |.. ++.|||++|+||+.
T Consensus 9 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~-----------~~~y~~~~SsT~~~---------- 67 (329)
T 1dpj_A 9 NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFL-----------HSKYDHEASSSYKA---------- 67 (329)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-----------SCCBCGGGCTTCEE----------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCC-----------cCcCCcccCcCeEE----------
Confidence 456779999999999999999999999999999999 975 643 36899999999987
Q ss_pred CCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 166 RNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 166 ~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
..|.|.+.| ++| ++.|.+++|+|+
T Consensus 68 --------~~~~~~i~Y-g~G-s~~G~~~~D~v~ 91 (329)
T 1dpj_A 68 --------NGTEFAIQY-GTG-SLEGYISQDTLS 91 (329)
T ss_dssp --------EEEEEEEEE-TTE-EEEEEEEEEEEE
T ss_pred --------CCcEEEEEE-CCc-eEEEEEEEEEEE
Confidence 368999999 887 689999999974
No 10
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=99.76 E-value=3.7e-19 Score=157.79 Aligned_cols=80 Identities=33% Similarity=0.579 Sum_probs=71.3
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CC----CCCCCCCCCccCCCccccCCCCCCCCccccccccccc
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CS----KCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLC 163 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~----~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C 163 (199)
++.+.+||++|.||||||+|.|+|||||+++||+|. |. .|.. ++.|||++|+||+.
T Consensus 57 n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~-----------~~~y~~~~SsT~~~-------- 117 (383)
T 2x0b_A 57 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY-----------HKLFDASDSSSYKH-------- 117 (383)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHT-----------SCCBCGGGCTTCEE--------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccC-----------CCCCCCCCCCcEEE--------
Confidence 577889999999999999999999999999999999 85 4643 46899999999998
Q ss_pred cCCCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 164 AHRNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 164 ~~~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
..|.|.+.| ++|+ +.|++++|+|+
T Consensus 118 ----------~~~~~~i~Y-g~Gs-~~G~~~~Dtv~ 141 (383)
T 2x0b_A 118 ----------NGTELTLRY-STGT-VSGFLSQDIIT 141 (383)
T ss_dssp ----------EEEEEEEEC-SSCE-EEEEEEEEEEE
T ss_pred ----------CCcEEEEEc-CCcc-EEEEEEeeEEE
Confidence 358999999 8876 88999999974
No 11
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=99.76 E-value=1.2e-18 Score=157.87 Aligned_cols=83 Identities=27% Similarity=0.510 Sum_probs=72.2
Q ss_pred eee-ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CC--CCCCCCCCCccCCCccccCCCCCCCCccccccccc
Q 040861 86 LRI-SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CS--KCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNL 161 (199)
Q Consensus 86 ~~~-~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~--~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~ 161 (199)
+++ ++.+.+|+++|.||||||++.|+|||||+++||+|. |. .|. .++.|||++|+||+..
T Consensus 130 ~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~-----------~~~~ydps~SsT~~~~----- 193 (453)
T 2bju_A 130 IELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCL-----------TKHLYDSSKSRTYEKD----- 193 (453)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGG-----------GSCCBCGGGCTTCEEE-----
T ss_pred eeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccC-----------CCCcCCCccCCceeEC-----
Confidence 444 467789999999999999999999999999999999 96 454 2468999999999873
Q ss_pred cccCCCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 162 LCAHRNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 162 ~C~~~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+ +.|.+++|+|+
T Consensus 194 -------------~~~~~i~Y-gdGs-~~G~~~~Dtv~ 216 (453)
T 2bju_A 194 -------------GTKVEMNY-VSGT-VSGFFSKDLVT 216 (453)
T ss_dssp -------------EEEEEEEC-SSSE-EEEEEEEEEEE
T ss_pred -------------CcEEEEEc-CCCC-eEEEEEEEEEE
Confidence 58999999 9887 79999999974
No 12
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=99.75 E-value=5.4e-19 Score=152.44 Aligned_cols=80 Identities=35% Similarity=0.577 Sum_probs=70.6
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CC--CCCCCCCCCccCCCccccCCCCCCCCccccccccccccC
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CS--KCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAH 165 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~--~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~ 165 (199)
++.+.+|+++|.||||+|++.|+|||||+++||+|. |. .|.. ++.|||++|+||+..
T Consensus 10 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-----------~~~y~~~~SsT~~~~--------- 69 (323)
T 3cms_A 10 NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKN-----------HQRFDPRKSSTFQNL--------- 69 (323)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-----------SCCBCGGGCTTCEEE---------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccC-----------CCCCCCccCCCeEEC---------
Confidence 566789999999999999999999999999999999 83 5643 468999999999983
Q ss_pred CCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 166 RNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 166 ~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+ +.|.+++|+|+
T Consensus 70 ---------~~~~~i~Y-g~Gs-~~G~~~~D~v~ 92 (323)
T 3cms_A 70 ---------GKPLSIHY-GTGS-MQGILGYDTVT 92 (323)
T ss_dssp ---------EEEEEEEE-TTEE-EEEEEEEEEEE
T ss_pred ---------CcEEEEEe-CCCC-eEEEEEEEEEE
Confidence 58999999 8876 78999999974
No 13
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=99.75 E-value=2.5e-18 Score=150.29 Aligned_cols=80 Identities=30% Similarity=0.489 Sum_probs=71.3
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CC---CCCCCCCCCccCCCccccCCCCCCCCcccccccccccc
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CS---KCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCA 164 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~---~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~ 164 (199)
++.+.+|+++|.||||+|++.|+|||||+++||+|. |. .|.. ++.|||++|+||+..
T Consensus 14 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~-----------~~~y~~~~SsT~~~~-------- 74 (361)
T 1mpp_A 14 DFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVG-----------KRFFDPSSSSTFKET-------- 74 (361)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCS-----------SCCBCGGGCTTCEEE--------
T ss_pred cCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCC-----------CCcCCCccCCceEec--------
Confidence 456789999999999999999999999999999999 97 6753 368999999999983
Q ss_pred CCCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 165 HRNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 165 ~~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| ++|+ +.|.+++|+|+
T Consensus 75 ----------~~~~~i~Y-g~Gs-~~G~~~~D~v~ 97 (361)
T 1mpp_A 75 ----------DYNLNITY-GTGG-ANGIYFRDSIT 97 (361)
T ss_dssp ----------EEEEEEEC-SSCE-EEEEEEEEEEE
T ss_pred ----------CCeEEEEE-CCce-EEEEEEEEEEE
Confidence 58999999 8887 79999999974
No 14
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=99.75 E-value=3.3e-18 Score=148.03 Aligned_cols=84 Identities=25% Similarity=0.449 Sum_probs=72.7
Q ss_pred eeeccCCceEEEEEEeCCCCceEEEEEeCCCCceeEe-----cc-CCCCCCCCCCCccCCCccccCCCCCCCCccccccc
Q 040861 86 LRISSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVP-----CE-CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCN 159 (199)
Q Consensus 86 ~~~~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~-----C~-C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~ 159 (199)
+++...+.+|+++|.||||||++.|+|||||+++||+ |. |..|.. ++.|||++|+||+.+
T Consensus 5 ~~l~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~-----------~~~y~~~~SsT~~~~--- 70 (339)
T 3fv3_A 5 LSLINEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKS-----------SGTFTPSSSSSYKNL--- 70 (339)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTT-----------TCCBCGGGCTTCEEE---
T ss_pred eEEEcCCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCC-----------CCcCCCccCcceeeC---
Confidence 4454556689999999999999999999999999998 66 666753 468999999999984
Q ss_pred cccccCCCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 160 NLLCAHRNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 160 s~~C~~~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+.+.|.+++|+|+
T Consensus 71 ---------------~~~~~i~Y-g~gs~~~G~~~~D~v~ 94 (339)
T 3fv3_A 71 ---------------GAAFTIRY-GDGSTSQGTWGKDTVT 94 (339)
T ss_dssp ---------------EEEEEEEC-TTSCEEEEEEEEEEEE
T ss_pred ---------------CceEEEEE-CCCceEEEEEEEEEEE
Confidence 48999999 9999999999999974
No 15
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=99.74 E-value=8.4e-19 Score=150.64 Aligned_cols=80 Identities=33% Similarity=0.547 Sum_probs=70.1
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CC--CCCCCCCCCccCCCccccCCCCCCCCccccccccccccC
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CS--KCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAH 165 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~--~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~ 165 (199)
++.+.+|+++|.||||||++.|+|||||+++||+|. |. .|.. ++.|||++|+||+..
T Consensus 7 n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-----------~~~y~~~~SsT~~~~--------- 66 (320)
T 4aa9_A 7 SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKN-----------HHRFDPRKSSTFRNL--------- 66 (320)
T ss_dssp -CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-----------SCCBCGGGCTTCEEE---------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCC-----------CCCCCCCCCcCeEcC---------
Confidence 567789999999999999999999999999999999 87 3542 469999999999984
Q ss_pred CCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 166 RNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 166 ~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+ +.|.+++|+|+
T Consensus 67 ---------~~~~~i~Y-g~gs-~~G~~~~D~v~ 89 (320)
T 4aa9_A 67 ---------GKPLSIHY-GTGS-MEGFLGYDTVT 89 (320)
T ss_dssp ---------EEEEEEEE-TTEE-EEEEEEEEEEE
T ss_pred ---------CcEEEEEE-CCcE-EEEEEEEEEEE
Confidence 58999999 8876 79999999974
No 16
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=99.74 E-value=2e-18 Score=150.54 Aligned_cols=80 Identities=31% Similarity=0.593 Sum_probs=70.5
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CC--CCCCCCCCCccCCCccccCCCCCCCCccccccccccccC
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CS--KCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAH 165 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~--~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~ 165 (199)
++.+.+|+++|.||||+|++.|+|||||+++||+|. |. .|.. ++.|||++|+||+.
T Consensus 19 n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-----------~~~y~~~~SsT~~~---------- 77 (351)
T 1tzs_A 19 NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKT-----------HSRFQPSQSSTYSQ---------- 77 (351)
T ss_dssp GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT-----------SCCBCGGGCTTCBC----------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCC-----------CCcCCcccCcceEE----------
Confidence 455678999999999999999999999999999999 96 5643 46899999999987
Q ss_pred CCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 166 RNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 166 ~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
..|.|.+.| ++|+ +.|.+++|+|+
T Consensus 78 --------~~~~~~i~Y-g~Gs-~~G~~~~D~v~ 101 (351)
T 1tzs_A 78 --------PGQSFSIQY-GTGS-LSGIIGADQVS 101 (351)
T ss_dssp --------CSCEEEEES-SSCE-EEEEEEEEEEE
T ss_pred --------CCCEEEEEe-CCCC-eEEEEEEeEEE
Confidence 469999999 8876 78999999974
No 17
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=99.73 E-value=2e-18 Score=148.81 Aligned_cols=80 Identities=29% Similarity=0.486 Sum_probs=70.1
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CC--CCCCCCCCCccCCCccccCCCCCCCCccccccccccccC
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CS--KCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAH 165 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~--~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~ 165 (199)
++.+.+|+++|.||||+|++.|+|||||+++||+|. |. .|.. ++.|||++|+||+..
T Consensus 8 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-----------~~~y~~~~SsT~~~~--------- 67 (324)
T 1am5_A 8 NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSN-----------HNKFKPRQSSTYVET--------- 67 (324)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHT-----------SCCBCGGGCTTCEEE---------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccC-----------CCcCCCccCCCeEeC---------
Confidence 456679999999999999999999999999999999 86 4643 468999999999873
Q ss_pred CCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 166 RNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 166 ~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| ++|+. .|.+++|+|+
T Consensus 68 ---------~~~~~i~Y-g~Gs~-~G~~~~D~v~ 90 (324)
T 1am5_A 68 ---------GKTVDLTY-GTGGM-RGILGQDTVS 90 (324)
T ss_dssp ---------EEEEEEEC-SSCEE-EEEEEEEEEE
T ss_pred ---------CcEEEEEE-CCCCe-EEEEEECcee
Confidence 58999999 88765 8999999974
No 18
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=99.73 E-value=6.2e-18 Score=146.75 Aligned_cols=92 Identities=21% Similarity=0.322 Sum_probs=72.4
Q ss_pred eeccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc---CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccc
Q 040861 87 RISSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE---CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLC 163 (199)
Q Consensus 87 ~~~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~---C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C 163 (199)
++...+.+|+++|.||||+|++.|+|||||+++||+|. |..|..+... ..|..++.|||++|+||+..
T Consensus 6 ~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~--~~C~~~~~y~~~~SsT~~~~------- 76 (342)
T 2qzx_A 6 TLHNEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKG--DFCKSAGSYSPASSRTSQNL------- 76 (342)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCT--TGGGTTCCBCGGGCTTCEEE-------
T ss_pred EEecCCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCcc--ccccCCCcCCcccCCCcccC-------
Confidence 34334578999999999999999999999999999854 6544211100 01334679999999999973
Q ss_pred cCCCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 164 AHRNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 164 ~~~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+.+.|.+++|+|+
T Consensus 77 -----------~~~~~i~Y-g~Gs~~~G~~~~D~v~ 100 (342)
T 2qzx_A 77 -----------NTRFDIKY-GDGSYAKGKLYKDTVG 100 (342)
T ss_dssp -----------EEEEEEEC-TTSCEEEEEEEEEEEE
T ss_pred -----------CCcEEEEe-CCCCeEEEEEEEEEEE
Confidence 58999999 9998899999999974
No 19
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=99.73 E-value=4.2e-18 Score=155.06 Aligned_cols=80 Identities=34% Similarity=0.551 Sum_probs=70.3
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CC---CCCCCCCCCccCCCccccCCCCCCCCcccccccccccc
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CS---KCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCA 164 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~---~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~ 164 (199)
++.+.+||++|.||||||+|.|+|||||+++||+|. |. .|.. ++.|||++|+||+.
T Consensus 48 n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~-----------~~~y~~~~SsT~~~--------- 107 (478)
T 1qdm_A 48 NYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYL-----------HSRYKAGASSTYKK--------- 107 (478)
T ss_dssp CGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGG-----------SCCBCGGGCTTCBC---------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccC-----------CCCCCcccCCCeee---------
Confidence 456778999999999999999999999999999999 85 4643 46899999999987
Q ss_pred CCCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 165 HRNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 165 ~~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
..|.|.+.| ++|+ +.|++++|+|+
T Consensus 108 ---------~~~~~~i~Y-g~Gs-~~G~~~~Dtv~ 131 (478)
T 1qdm_A 108 ---------NGKPAAIQY-GTGS-IAGYFSEDSVT 131 (478)
T ss_dssp ---------CCCEEEEEE-TTEE-EEEEEEEEEEE
T ss_pred ---------CCcEEEEEc-CCCC-eEEEEEEEEEE
Confidence 368999999 8876 88999999974
No 20
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=99.73 E-value=2.9e-18 Score=148.06 Aligned_cols=79 Identities=30% Similarity=0.560 Sum_probs=69.1
Q ss_pred cCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCC--CCCCCCCCccCCCccccCCCCCCCCccccccccccccCC
Q 040861 90 SLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSK--CAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHR 166 (199)
Q Consensus 90 ~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~--C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~ 166 (199)
+.+.+|+++|.||||+|++.|+|||||+++||+|. |.. |.. ++.|||++|+||+..
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~-----------~~~y~~~~SsT~~~~---------- 67 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTS-----------HSRFNPSESSTYSTN---------- 67 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-----------SCCBCGGGCTTCEEE----------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCC-----------CCcCCCccCCCeEEC----------
Confidence 45578999999999999999999999999999999 963 643 468999999999873
Q ss_pred CCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 167 NRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 167 ~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+. .|.+++|+|+
T Consensus 68 --------~~~~~i~Y-g~gs~-~G~~~~D~v~ 90 (329)
T 1htr_B 68 --------GQTFSLQY-GSGSL-TGFFGYDTLT 90 (329)
T ss_dssp --------EEEEEEEE-TTEEE-EEEEEEEEEE
T ss_pred --------CcEEEEEe-CCCCe-EEEEEeeeEE
Confidence 58999999 88764 8999999974
No 21
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=99.72 E-value=6.3e-18 Score=148.63 Aligned_cols=76 Identities=29% Similarity=0.350 Sum_probs=67.3
Q ss_pred CCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccCCCCC
Q 040861 91 LGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHRNRC 169 (199)
Q Consensus 91 ~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~~~C 169 (199)
.+.+||++|.||||+|++.|+|||||+++||+|. |..|. +.|||++|+||+.+
T Consensus 11 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~-------------~~f~~~~SsT~~~~------------- 64 (383)
T 2ewy_A 11 SGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID-------------TYFDTERSSTYRSK------------- 64 (383)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS-------------CCCCGGGCTTCEEE-------------
T ss_pred CCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc-------------cCcccccCccceeC-------------
Confidence 3468999999999999999999999999999999 86553 58999999999984
Q ss_pred CCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 170 PGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 170 ~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+ ..|++++|+|+
T Consensus 65 -----~~~~~i~Y-g~Gs-~~G~~~~Dtv~ 87 (383)
T 2ewy_A 65 -----GFDVTVKY-TQGS-WTGFVGEDLVT 87 (383)
T ss_dssp -----EEEEEEEC-SSCE-EEEEEEEEEEE
T ss_pred -----CceEEEEE-CCcE-EEEEEEEEEEE
Confidence 58999999 8876 58999999974
No 22
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=99.72 E-value=1e-17 Score=148.71 Aligned_cols=89 Identities=27% Similarity=0.460 Sum_probs=73.6
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEeccCCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccCCC-
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCECSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHRN- 167 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~~- 167 (199)
++.+.+||++|.||||||+|.|+|||||+++||+|. . +.+|+||+.++|.+..|....
T Consensus 17 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~-------------------~~~Sst~~~~~C~s~~C~~~~~ 75 (403)
T 3aup_A 17 DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE--Q-------------------QYSSKTYQAPFCHSTQCSRANT 75 (403)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS--S-------------------CCCCSSCBCCCTTBHHHHHTTC
T ss_pred CCCCceEEEEEECCCCCceeEEEEECCCCceeECCC--C-------------------CCCCCCCCccCCCCccccCccc
Confidence 345678999999999999999999999999999997 1 137889999999999998642
Q ss_pred -CC---CCC------CCCCceEEEEcc-CCceEEEEEEEEeeC
Q 040861 168 -RC---PGT------FSNCPYSVSYVS-AQTSTSGILVEMFFT 199 (199)
Q Consensus 168 -~C---~~~------~~~C~y~~~Y~g-dgs~~~G~l~~Dtlt 199 (199)
.| ..+ ++.|.|.+.| + |++.+.|++++|+|+
T Consensus 76 ~~c~~c~~~~~s~~~~~~~~~~~~Y-~~d~~~~~G~~~~Dtv~ 117 (403)
T 3aup_A 76 HQCLSCPAASRPGCHKNTCGLMSTN-PITQQTGLGELGEDVLA 117 (403)
T ss_dssp CCEEECSSSCBTTBCSSEEEEEEEE-TTTTEEEEEEEEEEEEE
T ss_pred cCccccCCCCCCCCCCCcceeEeec-CCCCceeeEEEEEEEEE
Confidence 22 111 2579999999 7 789999999999974
No 23
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=99.72 E-value=1.1e-17 Score=147.92 Aligned_cols=75 Identities=24% Similarity=0.285 Sum_probs=66.8
Q ss_pred CceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccCCCCCC
Q 040861 92 GFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHRNRCP 170 (199)
Q Consensus 92 ~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~~~C~ 170 (199)
+.+|+++|.||||+|++.|+|||||+++||+|. |..| ++.|||++|+||+.+
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~-------------~~~y~~~~SsT~~~~-------------- 72 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL-------------HRYYQRQLSSTYRDL-------------- 72 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC-------------SCCCCGGGCTTCEEE--------------
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc-------------cCCcCcccCCCceeC--------------
Confidence 568999999999999999999999999999999 8654 258999999999984
Q ss_pred CCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 171 GTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 171 ~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+. .|++++|+|+
T Consensus 73 ----~~~~~i~Y-g~Gs~-~G~~~~Dtv~ 95 (395)
T 2qp8_A 73 ----RKGVYVPY-TQGKW-EGELGTDLVS 95 (395)
T ss_dssp ----EEEEEEEC-SSCEE-EEEEEEEEEE
T ss_pred ----CceEEEEE-CCcEE-EEEEEeEEEE
Confidence 58999999 98765 8999999974
No 24
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=99.71 E-value=1.1e-17 Score=144.95 Aligned_cols=92 Identities=23% Similarity=0.312 Sum_probs=72.0
Q ss_pred eeccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc---CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccc
Q 040861 87 RISSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE---CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLC 163 (199)
Q Consensus 87 ~~~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~---C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C 163 (199)
++...+.+|+++|.||||+|++.|+|||||+++||+|. |..|...... ..|..++.|||++|+||+..
T Consensus 6 ~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~--~~C~~~~~y~~~~SsT~~~~------- 76 (334)
T 1j71_A 6 TLINEGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTN--NFCKQEGTFDPSSSSSAQNL------- 76 (334)
T ss_dssp EEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCT--TGGGSSCCBCGGGCTTCEEE-------
T ss_pred EEecCCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCccccccc--ccccCCCcCCcccCCCcccC-------
Confidence 33334678999999999999999999999999999864 5433210000 01334679999999999973
Q ss_pred cCCCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 164 AHRNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 164 ~~~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+.+.|.+++|+|+
T Consensus 77 -----------~~~~~i~Y-g~Gs~~~G~~~~D~v~ 100 (334)
T 1j71_A 77 -----------NQDFSIEY-GDLTSSQGSFYKDTVG 100 (334)
T ss_dssp -----------EEEEEEEB-TTSCEEEEEEEEEEEE
T ss_pred -----------CCceEEEE-CCCCEEEEEEEEEEEE
Confidence 58999999 9998899999999974
No 25
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=99.71 E-value=2.4e-17 Score=142.61 Aligned_cols=92 Identities=25% Similarity=0.398 Sum_probs=72.9
Q ss_pred eeccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc---CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccc
Q 040861 87 RISSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE---CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLC 163 (199)
Q Consensus 87 ~~~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~---C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C 163 (199)
++...+.+|+++|.||||||++.|+|||||+++||+|. |..|...... ..|..++.|||++|+||+.+
T Consensus 6 ~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~--~~C~~~~~y~~~~SsT~~~~------- 76 (342)
T 3pvk_A 6 TLHNEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTA--DFCKQKGTYDPSGSSASQDL------- 76 (342)
T ss_dssp EEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCT--TGGGTTCCBCGGGCTTCEEE-------
T ss_pred EEecCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCccccccccc--CCCCCCCcCCCccCcceeec-------
Confidence 34444568999999999999999999999999999874 5544321110 01334679999999999984
Q ss_pred cCCCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 164 AHRNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 164 ~~~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+.+.|.+++|+|+
T Consensus 77 -----------~~~~~i~Y-g~gs~~~G~~~~D~v~ 100 (342)
T 3pvk_A 77 -----------NTPFKIGY-GDGSSSQGTLYKDTVG 100 (342)
T ss_dssp -----------EEEEEEEC-SSSCEEEEEEEEEEEE
T ss_pred -----------CCeEEEEe-cCCCeEEEEEEEEEEE
Confidence 48999999 9998899999999974
No 26
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=99.71 E-value=3.5e-18 Score=150.81 Aligned_cols=80 Identities=26% Similarity=0.551 Sum_probs=70.4
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CC--CCCCCCCCCccCCCccccCCCCCCCCccccccccccccC
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CS--KCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAH 165 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~--~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~ 165 (199)
++.+.+|+++|.||||+|++.|+|||||+++||+|. |. .|.. ++.|||++|+||+..
T Consensus 58 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-----------~~~y~~~~SsT~~~~--------- 117 (375)
T 1miq_A 58 DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSI-----------KNLYDSSKSKSYEKD--------- 117 (375)
T ss_dssp GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGG-----------SCCBCGGGCTTCEEE---------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccC-----------CCcCCCccCCceEEC---------
Confidence 456778999999999999999999999999999999 86 4642 469999999999873
Q ss_pred CCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 166 RNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 166 ~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+ +.|.+++|+|+
T Consensus 118 ---------~~~~~i~Y-g~Gs-~~G~~~~Dtv~ 140 (375)
T 1miq_A 118 ---------GTKVDITY-GSGT-VKGFFSKDLVT 140 (375)
T ss_dssp ---------EEEEEEEE-TTEE-EEEEEEEEEEE
T ss_pred ---------CcEEEEEe-CCCe-EEEEEEEEEEE
Confidence 58999999 8877 79999999974
No 27
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=99.71 E-value=8.2e-18 Score=152.23 Aligned_cols=83 Identities=29% Similarity=0.523 Sum_probs=72.4
Q ss_pred eee-ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CC--CCCCCCCCCccCCCccccCCCCCCCCccccccccc
Q 040861 86 LRI-SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CS--KCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNL 161 (199)
Q Consensus 86 ~~~-~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~--~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~ 161 (199)
+++ ++.+.+||++|.||||||++.|++||||+++||+|. |. .|.. ++.|||++|+||+.
T Consensus 129 ~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~-----------~~~ydps~SsT~~~------ 191 (451)
T 3qvc_A 129 VELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCES-----------KNHYDSSKSKTYEK------ 191 (451)
T ss_dssp CCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTT-----------SCCBCGGGCTTCEE------
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCC-----------CCCCCCCCCccccc------
Confidence 344 567789999999999999999999999999999999 94 5743 46899999999987
Q ss_pred cccCCCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 162 LCAHRNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 162 ~C~~~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
..|.|.+.| +||+ +.|.+++|+|+
T Consensus 192 ------------~~~~f~i~Y-gdGs-~~G~~~~Dtv~ 215 (451)
T 3qvc_A 192 ------------DDTPVKLTS-KAGT-ISGIFSKDLVT 215 (451)
T ss_dssp ------------EEEEEEEEC-SSEE-EEEEEEEEEEE
T ss_pred ------------CCCEEEEEE-CCCE-EEEEEEEEEEE
Confidence 358999999 9887 99999999974
No 28
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=99.68 E-value=3.8e-17 Score=147.25 Aligned_cols=77 Identities=23% Similarity=0.255 Sum_probs=67.1
Q ss_pred cCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccCCCC
Q 040861 90 SLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHRNR 168 (199)
Q Consensus 90 ~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~~~ 168 (199)
..+.+||++|.||||+|+|.|+|||||+++||+|. | |.. ++.|||++|+||+.+
T Consensus 71 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~-----------~~~y~~~~SsT~~~~------------ 125 (455)
T 3lpj_A 71 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-----------HRYYQRQLSSTYRDL------------ 125 (455)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-----------SCCCCGGGCTTCEEE------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--ccc-----------CCcccCCCCCCcccC------------
Confidence 34568999999999999999999999999999999 7 422 368999999999984
Q ss_pred CCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 169 CPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 169 C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| ++|+. .|++++|+|+
T Consensus 126 ------~~~~~i~Y-g~Gs~-~G~~~~Dtv~ 148 (455)
T 3lpj_A 126 ------RKGVYVPY-TQGKW-EGELGTDLVS 148 (455)
T ss_dssp ------EEEEEEEC-SSCEE-EEEEEEEEEE
T ss_pred ------CccEEEEe-CCeEE-EEEEEEEEEE
Confidence 58999999 88764 9999999984
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=99.68 E-value=4.4e-17 Score=144.25 Aligned_cols=75 Identities=24% Similarity=0.270 Sum_probs=66.1
Q ss_pred CceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccCCCCCC
Q 040861 92 GFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHRNRCP 170 (199)
Q Consensus 92 ~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~~~C~ 170 (199)
+.+||++|.||||||++.|+|||||+++||+|. | |.. ++.|||++|+||+..
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~-----------~~~y~~~~SsT~~~~-------------- 79 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-----------HRYYQRQLSSTYRDL-------------- 79 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-----------SCCCCGGGCTTCEEE--------------
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Ccc-----------cCCcCcccCcccccC--------------
Confidence 458999999999999999999999999999998 7 321 368999999999983
Q ss_pred CCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 171 GTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 171 ~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| ++|+ ..|++++|+|+
T Consensus 80 ----~~~~~i~Y-g~Gs-~~G~~~~D~v~ 102 (402)
T 3vf3_A 80 ----RKGVYVPY-TQGK-WEGELGTDLVS 102 (402)
T ss_dssp ----EEEEEEEC-SSCE-EEEEEEEEEEE
T ss_pred ----CCEEEEEE-CcEE-EEEEEEEEEEE
Confidence 58999999 8876 59999999974
No 30
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=99.65 E-value=1.9e-16 Score=136.77 Aligned_cols=80 Identities=26% Similarity=0.359 Sum_probs=67.7
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccCCC
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHRN 167 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~~ 167 (199)
...+.+|+++|.|| +|++.|+|||||+++||+|. |..|..+ .++.|||++|+ ++.
T Consensus 10 ~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~---------~~~~y~~~~Ss-~~~------------ 65 (325)
T 1ibq_A 10 QNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQT---------GHDLYTPSSSA-TKL------------ 65 (325)
T ss_dssp CTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHT---------TSCCCBCCSSC-EEC------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccC---------CCCCCCchhcC-Ccc------------
Confidence 34567899999999 89999999999999999999 9865322 24689999998 543
Q ss_pred CCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 168 RCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 168 ~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
+.|.|.+.| +||+.+.|.+++|+|+
T Consensus 66 ------~~~~~~i~Y-g~Gs~~~G~~~~D~v~ 90 (325)
T 1ibq_A 66 ------SGYSWDISY-GDGSSASGDVYRDTVT 90 (325)
T ss_dssp ------TTCBEEEEC-SSSCEEEEEEEEEEEE
T ss_pred ------CCCEEEEEe-CCCCEEEEEEEEeEEE
Confidence 369999999 9998899999999974
No 31
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=99.63 E-value=1.8e-16 Score=136.90 Aligned_cols=79 Identities=27% Similarity=0.318 Sum_probs=66.9
Q ss_pred cCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccCCCC
Q 040861 90 SLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHRNR 168 (199)
Q Consensus 90 ~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~~~ 168 (199)
..+.+|+++|.|| ||++.|+|||||+++||+|. |..|..+ .++.|||++|+ ++.
T Consensus 12 ~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~---------~~~~y~~~~Ss-~~~------------- 66 (323)
T 1izd_A 12 SNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERS---------GHDYYTPGSSA-QKI------------- 66 (323)
T ss_dssp GGGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT---------TCCCBCCCTTC-EEE-------------
T ss_pred CCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccccc---------CCCCCCccccC-Ccc-------------
Confidence 3556899999999 89999999999999999999 9865321 24689999998 553
Q ss_pred CCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 169 CPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 169 C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
+.|.|.+.| +||+.+.|.+++|+|+
T Consensus 67 -----~~~~~~i~Y-g~Gs~~~G~~~~D~v~ 91 (323)
T 1izd_A 67 -----DGATWSISY-GDGSSASGDVYKDKVT 91 (323)
T ss_dssp -----EEEEEEEEC-TTSCEEEEEEEEEEEE
T ss_pred -----CCCeEEEEc-CCCCeEEEEEEEEEEE
Confidence 368999999 9998899999999974
No 32
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=99.63 E-value=5.5e-16 Score=134.32 Aligned_cols=74 Identities=22% Similarity=0.297 Sum_probs=62.0
Q ss_pred eeeccCCceEEEEEEeCCCCceEEEEEeCCCCceeEeccCCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccC
Q 040861 86 LRISSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCECSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAH 165 (199)
Q Consensus 86 ~~~~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~ 165 (199)
+++...+.+|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++.
T Consensus 5 ~~l~n~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~------------------~~y~~s~Ss~~~----------- 55 (340)
T 1wkr_A 5 VPATNQLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD------------------KSYVKTSTSSAT----------- 55 (340)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS------------------SCCCCCTTCEEE-----------
T ss_pred EeeeccCcEEEEEEEECCCCcEEEEEEeCCChhheecCC------------------CccCCcCCcccc-----------
Confidence 334233568999999999999999999999999999875 379998887543
Q ss_pred CCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 166 RNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 166 ~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+ +.|.+++|+|+
T Consensus 56 ---------~~~~~i~Y-g~Gs-~~G~~~~Dtv~ 78 (340)
T 1wkr_A 56 ---------SDKVSVTY-GSGS-FSGTEYTDTVT 78 (340)
T ss_dssp ---------EEEEEEEC-SSCE-EEEEEEEEEEE
T ss_pred ---------CceEEEEE-CCcE-EEEEEEEEEEE
Confidence 48999999 9886 88999999984
No 33
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=99.63 E-value=8.9e-17 Score=138.66 Aligned_cols=80 Identities=28% Similarity=0.397 Sum_probs=67.6
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccCCC
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHRN 167 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~~ 167 (199)
...+.+|+++|.|| +|++.|+|||||+++||+|. |..|..+ .++.|||++|+ ++.
T Consensus 11 ~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~---------~~~~y~~~~Ss-~~~------------ 66 (323)
T 1bxo_A 11 TANDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQS---------GHSVYNPSATG-KEL------------ 66 (323)
T ss_dssp CGGGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT---------TSCCBCHHHHC-EEE------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhcc---------CCCCCCcccCC-ccc------------
Confidence 34567899999999 89999999999999999999 9865322 24699999988 553
Q ss_pred CCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 168 RCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 168 ~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
+.|.|.+.| +||+.+.|++++|+|+
T Consensus 67 ------~~~~~~i~Y-g~Gs~~~G~~~~D~v~ 91 (323)
T 1bxo_A 67 ------SGYTWSISY-GDGSSASGNVFTDSVT 91 (323)
T ss_dssp ------EEEEEEEEC-TTSCEEEEEEEEEEEE
T ss_pred ------CCCeEEEEe-CCCCeEEEEEEEEEEE
Confidence 369999999 9998899999999974
No 34
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=99.57 E-value=1.1e-15 Score=132.18 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=66.9
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CC--CCCCCCCCCccCCCccccCCCCCCCCccccccccccccC
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CS--KCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAH 165 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~--~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~ 165 (199)
++.+.+|+++|.|| +|++.|+|||||+++||+|. |. .|... .++.|||++| ||+..
T Consensus 13 n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~---------~~~~y~~~~S-T~~~~--------- 71 (330)
T 1yg9_A 13 VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCP---------NLQKYEKLKP-KYISD--------- 71 (330)
T ss_dssp EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGST---------TCCCCCCSSC-EEEEE---------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCccc---------ccCccCCCCC-ceEEC---------
Confidence 45567899999999 89999999999999999999 96 57311 2469999999 99872
Q ss_pred CCCCCCCCCCCceEEEEccCCceEEEEEEEEeeC
Q 040861 166 RNRCPGTFSNCPYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 166 ~~~C~~~~~~C~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
.|.|.+.| +||+. .|.+++|+|+
T Consensus 72 ---------~~~~~i~Y-g~Gs~-~G~~~~Dtv~ 94 (330)
T 1yg9_A 72 ---------GNVQVKFF-DTGSA-VGRGIEDSLT 94 (330)
T ss_dssp ---------EEEEEEET-TTEEE-EEEEEEEEEE
T ss_pred ---------CCEEEEEE-CCceE-EEEEEEEEEE
Confidence 57999999 88765 9999999974
No 35
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=99.49 E-value=7.4e-15 Score=129.39 Aligned_cols=80 Identities=20% Similarity=0.438 Sum_probs=62.3
Q ss_pred ccCCceEEEEEEeCCCCceEEEEEeCCCCceeEecc-CCCCCCCCCCCccCCCccccCCCCCCCCccccccccccccCC-
Q 040861 89 SSLGFLHYTTVQLGTPGMKFMVALDTGSDLFWVPCE-CSKCAPTQGSAYASDFELSIYNPEVSSTSKKVTCNNLLCAHR- 166 (199)
Q Consensus 89 ~~~~~~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~-C~~C~~~~~~~~~~~~~~~~fdp~~SsT~~~v~C~s~~C~~~- 166 (199)
++.+.+||++|.|||| |+|||||+++||+|. |. +|+.++|+++.|...
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~-------------------------~~~~~~C~s~~C~~~~ 59 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ-------------------------PPAEIPCSSPTCLLAN 59 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC-------------------------CCCCCBTTSHHHHHHH
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC-------------------------CCCccCCCCchhcccc
Confidence 4667899999999998 999999999999997 31 345677777777642
Q ss_pred ----CCCCCC-------CCCC-ceEEEEccCCceEEEEEEEEeeC
Q 040861 167 ----NRCPGT-------FSNC-PYSVSYVSAQTSTSGILVEMFFT 199 (199)
Q Consensus 167 ----~~C~~~-------~~~C-~y~~~Y~gdgs~~~G~l~~Dtlt 199 (199)
..|... ++.| .|.++| +||+.+.|++++|+|+
T Consensus 60 ~~~~~sc~~~~~~~~~~~~~c~~f~i~Y-gdGs~~~G~l~~Dtv~ 103 (381)
T 1t6e_X 60 AYPAPGCPAPSCGSDKHDKPCTAYPYNP-VSGACAAGSLSHTRFV 103 (381)
T ss_dssp SSCCTTCCCCCC------CBCEECCBCT-TTCCBCCEEEEEEEEE
T ss_pred CCCCCCCCCccCCcCcCCCccccccccc-cCCceeeEEEEEEEEE
Confidence 245421 2467 599999 9999889999999984
No 36
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=84.76 E-value=0.91 Score=32.35 Aligned_cols=25 Identities=32% Similarity=0.425 Sum_probs=21.9
Q ss_pred EEEEEeCCCCceEEEEEeCCCCceeEe
Q 040861 96 YTTVQLGTPGMKFMVALDTGSDLFWVP 122 (199)
Q Consensus 96 ~~~v~iGTP~q~~~v~~DTGS~~~Wv~ 122 (199)
++++.|| .|.+.+.+|||.|.+-+.
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~ 34 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIE 34 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEES
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEe
Confidence 4789999 799999999999998773
No 37
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=84.21 E-value=1.2 Score=31.96 Aligned_cols=25 Identities=32% Similarity=0.331 Sum_probs=22.3
Q ss_pred EEEEEeCCCCceEEEEEeCCCCceeEe
Q 040861 96 YTTVQLGTPGMKFMVALDTGSDLFWVP 122 (199)
Q Consensus 96 ~~~v~iGTP~q~~~v~~DTGS~~~Wv~ 122 (199)
++++.|| .|.+.+.+|||.|.+-+.
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 5789999 799999999999998775
No 38
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=80.50 E-value=1.5 Score=31.16 Aligned_cols=24 Identities=38% Similarity=0.356 Sum_probs=21.4
Q ss_pred EEEEEeCCCCceEEEEEeCCCCceeE
Q 040861 96 YTTVQLGTPGMKFMVALDTGSDLFWV 121 (199)
Q Consensus 96 ~~~v~iGTP~q~~~v~~DTGS~~~Wv 121 (199)
++++.|| .|.+.+.+|||.|.+-+
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl 33 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIV 33 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEE
T ss_pred eEEEEEC--CEEEEEEEecCCCceEE
Confidence 5789999 89999999999998876
No 39
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=76.84 E-value=2.4 Score=31.02 Aligned_cols=28 Identities=25% Similarity=0.368 Sum_probs=22.8
Q ss_pred EEEEeC---CCCceEEEEEeCCCCceeEecc
Q 040861 97 TTVQLG---TPGMKFMVALDTGSDLFWVPCE 124 (199)
Q Consensus 97 ~~v~iG---TP~q~~~v~~DTGS~~~Wv~C~ 124 (199)
++|.|| +|+|.+...+|||.|++-+.-.
T Consensus 13 vtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 13 IKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp EEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred EEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 456666 7899999999999999877654
No 40
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=74.06 E-value=3.4 Score=30.16 Aligned_cols=25 Identities=24% Similarity=0.373 Sum_probs=21.4
Q ss_pred EEEEEEeCCCCceEEEEEeCCCCceeEe
Q 040861 95 HYTTVQLGTPGMKFMVALDTGSDLFWVP 122 (199)
Q Consensus 95 y~~~v~iGTP~q~~~v~~DTGS~~~Wv~ 122 (199)
=++ +.|| .|.+.+.+|||.|.+-+.
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~ 39 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLN 39 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEE
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEc
Confidence 346 9999 799999999999998774
No 41
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=73.10 E-value=3.6 Score=30.36 Aligned_cols=29 Identities=14% Similarity=0.311 Sum_probs=24.1
Q ss_pred eEEEEEEeCCCCceEEEEEeCCCCceeEecc
Q 040861 94 LHYTTVQLGTPGMKFMVALDTGSDLFWVPCE 124 (199)
Q Consensus 94 ~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~ 124 (199)
.+++++.|+ .+++.+++|||++.+-+.-.
T Consensus 26 ~~~v~v~In--G~~~~~LvDTGAs~s~is~~ 54 (148)
T 2i1a_A 26 MLYINIEIN--NYPVKAFVDTGAQTTIMSTR 54 (148)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred eEEEEEEEC--CEEEEEEEECCCCccccCHH
Confidence 577889998 78999999999998776543
No 42
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=67.23 E-value=6.6 Score=28.56 Aligned_cols=27 Identities=26% Similarity=0.298 Sum_probs=22.5
Q ss_pred EEEEEeCCCCceEEEEEeCCCCceeEecc
Q 040861 96 YTTVQLGTPGMKFMVALDTGSDLFWVPCE 124 (199)
Q Consensus 96 ~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~ 124 (199)
.+++.|| .|.+.+++|||.|.+-+.=.
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecc
Confidence 3678898 79999999999998877543
No 43
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=65.29 E-value=6.1 Score=29.69 Aligned_cols=29 Identities=14% Similarity=0.351 Sum_probs=24.7
Q ss_pred eEEEEEEeCCCCceEEEEEeCCCCceeEecc
Q 040861 94 LHYTTVQLGTPGMKFMVALDTGSDLFWVPCE 124 (199)
Q Consensus 94 ~y~~~v~iGTP~q~~~v~~DTGS~~~Wv~C~ 124 (199)
.+|+++.|. .+++.+++|||++.+-+.-.
T Consensus 24 ~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 24 MLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred EEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 577888898 79999999999998877655
No 44
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=54.80 E-value=13 Score=27.58 Aligned_cols=25 Identities=24% Similarity=0.351 Sum_probs=21.1
Q ss_pred EEEEEEeCCCCceEEEEEeCCCCceeE
Q 040861 95 HYTTVQLGTPGMKFMVALDTGSDLFWV 121 (199)
Q Consensus 95 y~~~v~iGTP~q~~~v~~DTGS~~~Wv 121 (199)
-++++.|+ .+.+.+++|||.|.+-+
T Consensus 23 P~v~i~I~--G~~~~~LlDTGAd~tVl 47 (132)
T 3slz_A 23 PRITLKVG--GQPVTFLVDTGAQHSVL 47 (132)
T ss_dssp SEEEEEET--TEEEEEEECTTCSSCEE
T ss_pred CEEEEEEC--CEEEEEEEeCCCCeEEE
Confidence 34678898 78999999999998766
No 45
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=50.94 E-value=13 Score=29.73 Aligned_cols=24 Identities=33% Similarity=0.439 Sum_probs=21.1
Q ss_pred EEEEEeCCCCceEEEEEeCCCCceeE
Q 040861 96 YTTVQLGTPGMKFMVALDTGSDLFWV 121 (199)
Q Consensus 96 ~~~v~iGTP~q~~~v~~DTGS~~~Wv 121 (199)
.+++.|| .|.+.+++|||.|.+-+
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl 33 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVI 33 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEE
T ss_pred eEEEEEC--CEEEEEEEecCCCceEE
Confidence 4689999 79999999999998766
No 46
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=49.37 E-value=15 Score=27.01 Aligned_cols=19 Identities=21% Similarity=0.371 Sum_probs=15.6
Q ss_pred CceEEEEEeCCCCceeEec
Q 040861 105 GMKFMVALDTGSDLFWVPC 123 (199)
Q Consensus 105 ~q~~~v~~DTGS~~~Wv~C 123 (199)
.|.+.+++|||.|.+-+.-
T Consensus 29 gq~~eaLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 29 SVYITALLDSGADITIISE 47 (124)
T ss_dssp EEEEEEEECTTCSSCEEET
T ss_pred CEEEEEEecCCCCcEEEec
Confidence 4677999999999987753
No 47
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=33.78 E-value=35 Score=27.18 Aligned_cols=25 Identities=32% Similarity=0.407 Sum_probs=21.5
Q ss_pred EEEEEEeCCCCceEEEEEeCCCCceeE
Q 040861 95 HYTTVQLGTPGMKFMVALDTGSDLFWV 121 (199)
Q Consensus 95 y~~~v~iGTP~q~~~v~~DTGS~~~Wv 121 (199)
=.+++.|| .|.+.+.+|||.|.+-+
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl 137 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVI 137 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEE
T ss_pred CcEEEEEC--CEEEeeeecccCCceee
Confidence 35789999 79999999999998766
No 48
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=27.88 E-value=61 Score=25.22 Aligned_cols=27 Identities=22% Similarity=0.337 Sum_probs=20.9
Q ss_pred EEEeCCC----CceEEEEEeCCCCceeEecc
Q 040861 98 TVQLGTP----GMKFMVALDTGSDLFWVPCE 124 (199)
Q Consensus 98 ~v~iGTP----~q~~~v~~DTGS~~~Wv~C~ 124 (199)
.|.||.- .....+++|||+.++++|-.
T Consensus 107 ~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 107 QVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp EEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred EEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 4777752 34578999999999999875
No 49
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=27.56 E-value=45 Score=27.49 Aligned_cols=26 Identities=19% Similarity=0.188 Sum_probs=21.0
Q ss_pred EEeCC---CCceEEEEEeCCCCceeEecc
Q 040861 99 VQLGT---PGMKFMVALDTGSDLFWVPCE 124 (199)
Q Consensus 99 v~iGT---P~q~~~v~~DTGS~~~Wv~C~ 124 (199)
|.||. +...+.++||||+.++++|-.
T Consensus 202 i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 202 YSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp EEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred EEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 67775 245789999999999999875
No 50
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=24.31 E-value=66 Score=26.45 Aligned_cols=27 Identities=22% Similarity=0.417 Sum_probs=21.1
Q ss_pred EEEeCCC---CceEEEEEeCCCCceeEecc
Q 040861 98 TVQLGTP---GMKFMVALDTGSDLFWVPCE 124 (199)
Q Consensus 98 ~v~iGTP---~q~~~v~~DTGS~~~Wv~C~ 124 (199)
.|.||.- .....++||||+.++++|-.
T Consensus 200 ~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 200 GYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp EEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred eEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 3778752 24678999999999999875
No 51
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=22.95 E-value=46 Score=26.19 Aligned_cols=26 Identities=23% Similarity=0.273 Sum_probs=19.8
Q ss_pred EEeCC-----CCceEEEEEeCCCCceeEecc
Q 040861 99 VQLGT-----PGMKFMVALDTGSDLFWVPCE 124 (199)
Q Consensus 99 v~iGT-----P~q~~~v~~DTGS~~~Wv~C~ 124 (199)
|.||. +.....++||||+.++++|-.
T Consensus 197 i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 197 VLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp EEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred EEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 66774 234578999999999999753
No 52
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=22.43 E-value=65 Score=26.47 Aligned_cols=27 Identities=26% Similarity=0.353 Sum_probs=21.1
Q ss_pred EEEeCCC---CceEEEEEeCCCCceeEecc
Q 040861 98 TVQLGTP---GMKFMVALDTGSDLFWVPCE 124 (199)
Q Consensus 98 ~v~iGTP---~q~~~v~~DTGS~~~Wv~C~ 124 (199)
.|.||.- .....+++|||+.++++|-.
T Consensus 196 ~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 225 (325)
T 1ibq_A 196 GYSIGDGSSSSSGFSAIADTGTTLILLDDE 225 (325)
T ss_dssp EEEETTSCCBSCCEEEEECTTCCSEEECHH
T ss_pred cEEECCeeccCCCceEEEeCCCCcEeCCHH
Confidence 3677752 35678999999999999875
Done!