Your job contains 1 sequence.
>040870
MNENGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTH
YLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIG
GRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPPAEILARC
EFLEPLSEATLSDYEWLVANLQKPAPVLMKRVQRY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040870
(215 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2206194 - symbol:AT1G31410 species:3702 "Arabi... 628 2.1e-61 1
TIGR_CMR|BA_1300 - symbol:BA_1300 "spermidine/putrescine ... 139 1.7e-07 1
UNIPROTKB|Q9KKJ4 - symbol:VCA1113 "Spermidine/putrescine ... 115 0.00016 1
TIGR_CMR|VC_A1113 - symbol:VC_A1113 "spermidine/putrescin... 115 0.00016 1
>TAIR|locus:2206194 [details] [associations]
symbol:AT1G31410 species:3702 "Arabidopsis thaliana"
[GO:0005215 "transporter activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001188
PRINTS:PR00909 EMBL:CP002684 GO:GO:0009941 GO:GO:0042597
eggNOG:COG0687 GO:GO:0019808 GO:GO:0015846 EMBL:BT015412
IPI:IPI00520881 RefSeq:NP_174426.2 UniGene:At.40347
ProteinModelPortal:Q66GJ0 PaxDb:Q66GJ0 PRIDE:Q66GJ0
EnsemblPlants:AT1G31410.1 GeneID:840031 KEGG:ath:AT1G31410
TAIR:At1g31410 InParanoid:Q66GJ0 OMA:GTMVIAY PhylomeDB:Q66GJ0
ProtClustDB:CLSN2680340 Genevestigator:Q66GJ0 Uniprot:Q66GJ0
Length = 524
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 131/229 (57%), Positives = 157/229 (68%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQNLALLG 50
+DW DLW PELAGRI+MVNSPREV+G +Q GR+AV++NLA L
Sbjct: 262 EDWADLWRPELAGRIAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEKNLASLM 321
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
Q+RLFD +YLK F +GDVW+ VGWSSDV+P KRMSNV V+VPKSGA+LWADLWAIPA
Sbjct: 322 KQIRLFDSNNYLKAFNVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIPA 381
Query: 111 ASRL--ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV-------KL-------PE 154
S E +Q GGRVRGP PLI+QWIEFCLQ AR+LPF V L PE
Sbjct: 382 VSDSGKEAEQRGGRVRGPSPLINQWIEFCLQPARSLPFTREVIPGASPSALDGPLVTEPE 441
Query: 155 ELLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQK 203
+ K + LDT L+ GVPP EIL++CEFLEPL EATLS+Y L+ ++K
Sbjct: 442 KTKKDRTKLDTNLVTGVPPPEILSKCEFLEPLPEATLSEYRLLIETVRK 490
>TIGR_CMR|BA_1300 [details] [associations]
symbol:BA_1300 "spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0015417 "polyamine-transporting ATPase
activity" evidence=ISS] [GO:0015847 "putrescine transport"
evidence=ISS] [GO:0015848 "spermidine transport" evidence=ISS]
[GO:0042626 "ATPase activity, coupled to transmembrane movement of
substances" evidence=ISS] InterPro:IPR001188 PIRSF:PIRSF019574
PRINTS:PR00909 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0042597 KO:K11069 GO:GO:0019808
HOGENOM:HOG000263814 GO:GO:0015846 RefSeq:NP_843768.1
RefSeq:YP_017915.1 RefSeq:YP_027472.1 HSSP:P23861
ProteinModelPortal:Q81TH5 IntAct:Q81TH5 DNASU:1085223
EnsemblBacteria:EBBACT00000008763 EnsemblBacteria:EBBACT00000013649
EnsemblBacteria:EBBACT00000023557 GeneID:1085223 GeneID:2815193
GeneID:2852748 KEGG:ban:BA_1300 KEGG:bar:GBAA_1300 KEGG:bat:BAS1202
OMA:LYSWADY ProtClustDB:CLSK916172
BioCyc:BANT260799:GJAJ-1277-MONOMER
BioCyc:BANT261594:GJ7F-1335-MONOMER Uniprot:Q81TH5
Length = 345
Score = 139 (54.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 36/116 (31%), Positives = 52/116 (44%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 147 WTDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 206
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 207 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 262
>UNIPROTKB|Q9KKJ4 [details] [associations]
symbol:VCA1113 "Spermidine/putrescine ABC transporter,
periplasmic spermidine/putrescine-binding protein" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0015417
"polyamine-transporting ATPase activity" evidence=ISS] [GO:0015847
"putrescine transport" evidence=ISS] [GO:0015848 "spermidine
transport" evidence=ISS] InterPro:IPR001188 PIRSF:PIRSF019574
PRINTS:PR00909 GenomeReviews:AE003853_GR GO:GO:0042597
GO:GO:0019808 GO:GO:0015417 GO:GO:0015847 GO:GO:0015848 KO:K02055
HSSP:P23861 EMBL:AE004436 PIR:B82377 RefSeq:NP_233492.1
ProteinModelPortal:Q9KKJ4 DNASU:2612172 GeneID:2612172
KEGG:vch:VCA1113 PATRIC:20086744 OMA:TIHYANA ProtClustDB:CLSK789277
Uniprot:Q9KKJ4
Length = 343
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 48/208 (23%), Positives = 80/208 (38%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQ 52
NG W DLW + ++ +++ R+V G ++ ++L L
Sbjct: 141 NGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEEEIKKAYESLVALKKN 200
Query: 53 VRLF--DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
V L+ D H V G + + + W+ + M + V+P+ GA LW D + IP+
Sbjct: 201 VLLYNSDAPHVPYVSG--EATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPS 258
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG 170
S K I PL H++I F Q + G+ L +L
Sbjct: 259 GS----KNI--------PLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLPAELRDN 306
Query: 171 ---VPPAEILARCEFLEPLSEATLSDYE 195
P E + + EF+ + TL+ YE
Sbjct: 307 PTIFPSDEDMKKGEFINDVGPETLAIYE 334
>TIGR_CMR|VC_A1113 [details] [associations]
symbol:VC_A1113 "spermidine/putrescine ABC transporter,
periplasmic spermidine/putrescine-binding protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0015417
"polyamine-transporting ATPase activity" evidence=ISS] [GO:0015847
"putrescine transport" evidence=ISS] [GO:0015848 "spermidine
transport" evidence=ISS] InterPro:IPR001188 PIRSF:PIRSF019574
PRINTS:PR00909 GenomeReviews:AE003853_GR GO:GO:0042597
GO:GO:0019808 GO:GO:0015417 GO:GO:0015847 GO:GO:0015848 KO:K02055
HSSP:P23861 EMBL:AE004436 PIR:B82377 RefSeq:NP_233492.1
ProteinModelPortal:Q9KKJ4 DNASU:2612172 GeneID:2612172
KEGG:vch:VCA1113 PATRIC:20086744 OMA:TIHYANA ProtClustDB:CLSK789277
Uniprot:Q9KKJ4
Length = 343
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 48/208 (23%), Positives = 80/208 (38%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQ 52
NG W DLW + ++ +++ R+V G ++ ++L L
Sbjct: 141 NGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEEEIKKAYESLVALKKN 200
Query: 53 VRLF--DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
V L+ D H V G + + + W+ + M + V+P+ GA LW D + IP+
Sbjct: 201 VLLYNSDAPHVPYVSG--EATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPS 258
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG 170
S K I PL H++I F Q + G+ L +L
Sbjct: 259 GS----KNI--------PLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLPAELRDN 306
Query: 171 ---VPPAEILARCEFLEPLSEATLSDYE 195
P E + + EF+ + TL+ YE
Sbjct: 307 PTIFPSDEDMKKGEFINDVGPETLAIYE 334
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 215 215 0.00087 112 3 11 22 0.50 32
32 0.50 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 614 (65 KB)
Total size of DFA: 190 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.91u 0.15s 19.06t Elapsed: 00:00:01
Total cpu time: 18.91u 0.15s 19.06t Elapsed: 00:00:01
Start: Sat May 11 16:12:52 2013 End: Sat May 11 16:12:53 2013