BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040870
(215 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255557729|ref|XP_002519894.1| transporter, putative [Ricinus communis]
gi|223540940|gb|EEF42498.1| transporter, putative [Ricinus communis]
Length = 507
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/240 (62%), Positives = 178/240 (74%), Gaps = 30/240 (12%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGT----------------QAAAGRIAVQQNLALL 49
+DW DLW P+L GRISM++SPREV+G + G+ AVQ+NLAL
Sbjct: 251 IEDWADLWRPDLKGRISMIDSPREVVGAVLKYMGASYNAKDIELEVHGGKSAVQENLALF 310
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G QVRLFD HYLK FG+GDVW+AVGWSSDVLP KRMSN+AVVVPKSG+SLWADLWAIP
Sbjct: 311 GKQVRLFDSMHYLKAFGVGDVWVAVGWSSDVLPVAKRMSNIAVVVPKSGSSLWADLWAIP 370
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPF--------------NTRVKLPEE 155
AASRL T +IGGRVRGP PLIHQWIEFCLQ ARA+PF +T V++PEE
Sbjct: 371 AASRLATNRIGGRVRGPSPLIHQWIEFCLQAARAMPFKQEVIPGASPSALESTPVEVPEE 430
Query: 156 LLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKPAPVLMKRVQRY 215
L +GKP LDT LIAGVPP EIL+RCEFLEPLS+A L DY+WL+A++Q+P P L+ R+ Y
Sbjct: 431 LTRGKPRLDTNLIAGVPPPEILSRCEFLEPLSDAQLLDYKWLIASMQQPGPNLIHRIHPY 490
>gi|224074577|ref|XP_002304393.1| predicted protein [Populus trichocarpa]
gi|222841825|gb|EEE79372.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/240 (63%), Positives = 176/240 (73%), Gaps = 30/240 (12%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGT----------------QAAAGRIAVQQNLALL 49
+DW DLW PELAGRISMV+SPREV+G+ Q G+ AVQQNLALL
Sbjct: 168 IEDWADLWRPELAGRISMVDSPREVVGSVLKYMGASYNTKNIDLQVPGGKNAVQQNLALL 227
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G QVRLFD +YLK F +GD W+AVGWSSDVLP KRMSNVAVVVPKSG SLWADLWAIP
Sbjct: 228 GKQVRLFDSMYYLKTFSMGDAWVAVGWSSDVLPIAKRMSNVAVVVPKSGTSLWADLWAIP 287
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPF--------------NTRVKLPEE 155
AA++LET QIGGR+RGP PLIHQWIEFCLQ ARALPF N+ +++P+E
Sbjct: 288 AATKLETNQIGGRIRGPSPLIHQWIEFCLQAARALPFKQEVIPGATPSAIENSVIEVPKE 347
Query: 156 LLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKPAPVLMKRVQRY 215
L KGKP LDT LIAGVPP EIL +CEFLEPL +ATLSDY+ L+ +Q P P L+ R+Q Y
Sbjct: 348 LTKGKPKLDTNLIAGVPPPEILTKCEFLEPLPDATLSDYKLLIRTMQIPDPGLIHRIQHY 407
>gi|449455671|ref|XP_004145575.1| PREDICTED: uncharacterized protein LOC101211357 [Cucumis sativus]
gi|449485058|ref|XP_004157059.1| PREDICTED: uncharacterized protein LOC101230567 [Cucumis sativus]
Length = 549
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 150/238 (63%), Positives = 172/238 (72%), Gaps = 29/238 (12%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQNLALL 49
+DW DLW PEL GRISMV+SPREVIG +Q GR A+ QNL LL
Sbjct: 290 MEDWSDLWCPELRGRISMVDSPREVIGAVLKYMGASYNTENISSQIPGGRDAIHQNLTLL 349
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
QVRLFD HYLK F +GDVW+AVGWSSDVLP VKRMSN+AVVVPKSG+SLWADLWAIP
Sbjct: 350 AKQVRLFDSAHYLKAFAVGDVWVAVGWSSDVLPVVKRMSNIAVVVPKSGSSLWADLWAIP 409
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTR-------------VKLPEEL 156
A SR+ET+ IGGRVRGP PL HQWIEFCLQTARALPF V +P+EL
Sbjct: 410 ATSRIETEPIGGRVRGPSPLFHQWIEFCLQTARALPFKQEVVPGASPAAIEGPVVVPKEL 469
Query: 157 LKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKPAPVLMKRVQR 214
+GKP LDT LI GVPP++IL +CEFL+PLS++TL+DY WL AN+QKP LM RV +
Sbjct: 470 FEGKPKLDTNLIGGVPPSDILEKCEFLQPLSDSTLADYRWLAANMQKPEHRLMDRVHQ 527
>gi|147822062|emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera]
Length = 875
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 149/241 (61%), Positives = 171/241 (70%), Gaps = 31/241 (12%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGT----------------QAAAGRIAVQQNLALL 49
+DW DLW PELAGRISM++SPREV+G Q GR AVQQNL LL
Sbjct: 620 IEDWADLWRPELAGRISMIDSPREVVGAVLKYMGASYNTDNIELQVNGGRNAVQQNLMLL 679
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
QVR FD THY+K +GDVW+AVGWSSDVLPA KRMSNVAV+VPKSGASLWADLWAIP
Sbjct: 680 AKQVRCFDSTHYIKALSVGDVWVAVGWSSDVLPAAKRMSNVAVIVPKSGASLWADLWAIP 739
Query: 110 AASRLE-TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTR--------------VKLPE 154
+ S+LE ++QIGGRVRGP P+IHQWIEFCLQ ARA PF V+ P
Sbjct: 740 STSKLERSRQIGGRVRGPSPVIHQWIEFCLQAARAFPFTEEVIPGASPSAIECASVEAPR 799
Query: 155 ELLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKPAPVLMKRVQR 214
EL KGKP L+T LIAG+PP EILA CEFLEPLS+ATLSDY L+A +QKP+ L+ + R
Sbjct: 800 ELTKGKPKLETNLIAGMPPPEILAHCEFLEPLSDATLSDYRGLIAGIQKPSHGLIHGLHR 859
Query: 215 Y 215
Y
Sbjct: 860 Y 860
>gi|225427562|ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242504 [Vitis vinifera]
gi|296085502|emb|CBI29234.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/241 (61%), Positives = 171/241 (70%), Gaps = 31/241 (12%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGT----------------QAAAGRIAVQQNLALL 49
+DW DLW PELAGRISM++SPREV+G Q GR AVQQNL LL
Sbjct: 298 IEDWADLWRPELAGRISMIDSPREVVGAVLKYMGASYNTDNIELQVNGGRNAVQQNLMLL 357
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
QVR FD THY+K +GDVW+AVGWSSDVLPA KRMSNVAV+VPKSGASLWADLWAIP
Sbjct: 358 AKQVRCFDSTHYIKALSVGDVWVAVGWSSDVLPAAKRMSNVAVIVPKSGASLWADLWAIP 417
Query: 110 AASRLE-TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTR--------------VKLPE 154
+ S+LE ++QIGGRVRGP P+IHQWIEFCLQ ARA PF V+ P
Sbjct: 418 STSKLERSRQIGGRVRGPSPVIHQWIEFCLQAARAFPFTEEVIPGASPSAIECASVEAPR 477
Query: 155 ELLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKPAPVLMKRVQR 214
EL KGKP L+T LIAG+PP EILA CEFLEPLS+ATLSDY L+A +QKP+ L+ + R
Sbjct: 478 ELTKGKPKLETNLIAGMPPPEILAHCEFLEPLSDATLSDYRGLIAGIQKPSHGLIHGLHR 537
Query: 215 Y 215
Y
Sbjct: 538 Y 538
>gi|356559069|ref|XP_003547824.1| PREDICTED: uncharacterized protein LOC100781794 [Glycine max]
Length = 552
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/238 (59%), Positives = 171/238 (71%), Gaps = 30/238 (12%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIGT----------------QAAAGRIAVQQNLALLG 50
+DW DLW P+LAGRISMV+SPREVIG + GR AV+ NLALL
Sbjct: 298 EDWADLWRPDLAGRISMVDSPREVIGAVLKYMGASYNTNDINMEVNGGRDAVKHNLALLA 357
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
QVRLFD ++YLK FG+GDVW+AVGWSSD++PA KRMSNVAVVVPKSGASLWADLWAIPA
Sbjct: 358 KQVRLFDSSNYLKAFGVGDVWVAVGWSSDIIPAAKRMSNVAVVVPKSGASLWADLWAIPA 417
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV--------------KLPEEL 156
ASR++T +IGGR+RGP PLIHQWIEFCLQ+ARALPF V +P EL
Sbjct: 418 ASRIQTNRIGGRIRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPSHLQGHSANVPVEL 477
Query: 157 LKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKPAPVLMKRVQR 214
KG P L+ L+ G PP +IL +CEFLEPLS +TLSDY WL+ ++Q+P L+ ++ +
Sbjct: 478 TKGGPRLNGNLVDGAPPPDILEKCEFLEPLSNSTLSDYHWLLTSIQEPGHGLIHKMYQ 535
>gi|357517389|ref|XP_003628983.1| RING-H2 finger protein ATL5F [Medicago truncatula]
gi|355523005|gb|AET03459.1| RING-H2 finger protein ATL5F [Medicago truncatula]
Length = 786
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/240 (58%), Positives = 171/240 (71%), Gaps = 30/240 (12%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGT----------------QAAAGRIAVQQNLALL 49
+DW DLW P+LAGRISMV+SPREV+G + GR AV+ NLALL
Sbjct: 297 IEDWADLWRPDLAGRISMVDSPREVVGAVLKYMGASYNANDINLEVNGGRDAVKHNLALL 356
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
QVRLFD +YLK FG+GDVW+AVGWSSD++P KRMSNVAV+VPKSGASLWADLWAIP
Sbjct: 357 AKQVRLFDSENYLKAFGVGDVWVAVGWSSDIIPVAKRMSNVAVIVPKSGASLWADLWAIP 416
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV--------------KLPEE 155
AAS+++T +IGGRVRGP PLIHQWIEFCLQ+ARALPF V + E
Sbjct: 417 AASKIQTSRIGGRVRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPPLLQGHSTNVALE 476
Query: 156 LLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKPAPVLMKRVQRY 215
L KG+P L T LI G PP +IL RCEFLEPLS + +SDY WL+A++Q+P L+ ++++Y
Sbjct: 477 LTKGRPRLVTNLIDGAPPPDILERCEFLEPLSNSAVSDYHWLLASIQEPGNGLIHKMRQY 536
>gi|356560607|ref|XP_003548582.1| PREDICTED: uncharacterized protein LOC100809061 [Glycine max]
Length = 508
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 136/238 (57%), Positives = 167/238 (70%), Gaps = 30/238 (12%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIGT----------------QAAAGRIAVQQNLALLG 50
+DW DLW P+LAGRI MV+SPREV+G + GR V+ NLALL
Sbjct: 254 EDWADLWRPDLAGRILMVDSPREVVGAVLKYMGASYNTNDINAEVNGGRDVVKHNLALLA 313
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
QVRLFD ++YLK FG+GD W+AVGWSSD++PA KRMSNVAVVVPKSG SLWADLWAIPA
Sbjct: 314 KQVRLFDSSNYLKAFGVGDAWVAVGWSSDIIPAAKRMSNVAVVVPKSGVSLWADLWAIPA 373
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV--------------KLPEEL 156
ASR++T +IGGR+RGP PLIHQWIEFCLQ+ARALPF V +P EL
Sbjct: 374 ASRIQTNRIGGRIRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPSHLQGHSANVPVEL 433
Query: 157 LKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKPAPVLMKRVQR 214
KG P ++ L+ G PP +IL RCEFLEPLS +TLSDY WL+ ++Q+P L+ ++ +
Sbjct: 434 TKGGPRINGNLVDGAPPPDILERCEFLEPLSNSTLSDYHWLLTSIQEPGHGLIHKMYQ 491
>gi|115460340|ref|NP_001053770.1| Os04g0602200 [Oryza sativa Japonica Group]
gi|113565341|dbj|BAF15684.1| Os04g0602200, partial [Oryza sativa Japonica Group]
Length = 367
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/229 (56%), Positives = 162/229 (70%), Gaps = 30/229 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQNLALL 49
+DW DLW PELAG+ISMV+SPREVIG ++ GR V ++L L
Sbjct: 117 IQDWGDLWRPELAGKISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQL 176
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
NQV+LFD T+YLK FG+GDVW+AVGWSSDV+PA KRMS+VAVVVPKSG+SLWADLWAIP
Sbjct: 177 QNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAVVVPKSGSSLWADLWAIP 236
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV--------------KLPEE 155
+A++ +T +IGGR RGP PLI+QW +FCLQ+AR+LPF V ++P+E
Sbjct: 237 SATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIPGASPLFLEKPVPEVPQE 296
Query: 156 LLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKP 204
K KP L+T L+ G PP EIL +CEFLEPLSE L DY+WL+ +Q+P
Sbjct: 297 RNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLITRMQRP 345
>gi|38344144|emb|CAE01823.2| OSJNBa0041A02.11 [Oryza sativa Japonica Group]
Length = 422
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/229 (56%), Positives = 162/229 (70%), Gaps = 30/229 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQNLALL 49
+DW DLW PELAG+ISMV+SPREVIG ++ GR V ++L L
Sbjct: 172 IQDWGDLWRPELAGKISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQL 231
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
NQV+LFD T+YLK FG+GDVW+AVGWSSDV+PA KRMS+VAVVVPKSG+SLWADLWAIP
Sbjct: 232 QNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAVVVPKSGSSLWADLWAIP 291
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV--------------KLPEE 155
+A++ +T +IGGR RGP PLI+QW +FCLQ+AR+LPF V ++P+E
Sbjct: 292 SATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIPGASPLFLEKPVPEVPQE 351
Query: 156 LLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKP 204
K KP L+T L+ G PP EIL +CEFLEPLSE L DY+WL+ +Q+P
Sbjct: 352 RNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLITRMQRP 400
>gi|357165613|ref|XP_003580439.1| PREDICTED: uncharacterized protein LOC100830894 [Brachypodium
distachyon]
Length = 526
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/233 (54%), Positives = 162/233 (69%), Gaps = 30/233 (12%)
Query: 2 NENGFKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQN 45
N +DW+DLW PELAG+ISMV+SPREVIG T+ + GR A+ +
Sbjct: 272 NLKPIQDWEDLWRPELAGKISMVDSPREVIGAVLKRLGSSYNTIDMETEVSGGREAILNS 331
Query: 46 LALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 105
L QV+LFD +YLK FG+GDVW+ VGWSSDV+PA KRMSNVAVVVPKSG+SLWADL
Sbjct: 332 FVQLQKQVQLFDSMNYLKSFGVGDVWVTVGWSSDVIPAAKRMSNVAVVVPKSGSSLWADL 391
Query: 106 WAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV--------------K 151
WAIP A+R +T +IGGR RGP PLIHQW +FCLQ+AR+LPF + +
Sbjct: 392 WAIPCATRFQTDRIGGRTRGPSPLIHQWFDFCLQSARSLPFRQEIIPGASPLFLENPAPE 451
Query: 152 LPEELLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKP 204
+P+++ K KP L+T L+ GVPP EIL RCEFLEPL + L DY+WL++ +Q+P
Sbjct: 452 VPQDVNKRKPKLETNLVRGVPPPEILERCEFLEPLPDKVLGDYQWLMSRVQRP 504
>gi|218195504|gb|EEC77931.1| hypothetical protein OsI_17268 [Oryza sativa Indica Group]
gi|222629488|gb|EEE61620.1| hypothetical protein OsJ_16044 [Oryza sativa Japonica Group]
Length = 537
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 163/233 (69%), Gaps = 30/233 (12%)
Query: 2 NENGFKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQN 45
N +DW DLW PELAG+ISMV+SPREVIG ++ GR V ++
Sbjct: 283 NLKPIQDWGDLWRPELAGKISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLES 342
Query: 46 LALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 105
L L NQV+LFD T+YLK FG+GDVW+AVGWSSDV+PA KRMS+VAVVVPKSG+SLWADL
Sbjct: 343 LTQLQNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAVVVPKSGSSLWADL 402
Query: 106 WAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV--------------K 151
WAIP+A++ +T +IGGR RGP PLI+QW +FCLQ+AR+LPF V +
Sbjct: 403 WAIPSATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIPGASPLFLEKPVPE 462
Query: 152 LPEELLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKP 204
+P+E K KP L+T L+ G PP EIL +CEFLEPLSE L DY+WL+ +Q+P
Sbjct: 463 VPQERNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLITRMQRP 515
>gi|116310926|emb|CAH67864.1| B0403H10-OSIGBa0105A11.16 [Oryza sativa Indica Group]
Length = 537
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 163/233 (69%), Gaps = 30/233 (12%)
Query: 2 NENGFKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQN 45
N +DW DLW PELAG+ISMV+SPREVIG ++ GR V ++
Sbjct: 283 NLKPIQDWGDLWRPELAGKISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLES 342
Query: 46 LALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 105
L L NQV+LFD T+YLK FG+GDVW+AVGWSSDV+PA KRMS+VAVVVPKSG+SLWADL
Sbjct: 343 LTQLQNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAVVVPKSGSSLWADL 402
Query: 106 WAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV--------------K 151
WAIP+A++ +T +IGGR RGP PLI+QW +FCLQ+AR+LPF V +
Sbjct: 403 WAIPSATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIPGASPLFLEKPVPE 462
Query: 152 LPEELLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKP 204
+P+E K KP L+T L+ G PP EIL +CEFLEPLSE L DY+WL+ +Q+P
Sbjct: 463 VPQERNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLITRMQRP 515
>gi|226510377|ref|NP_001146059.1| uncharacterized protein LOC100279590 [Zea mays]
gi|219885513|gb|ACL53131.1| unknown [Zea mays]
gi|413919418|gb|AFW59350.1| putative putrescine-binding domain family protein [Zea mays]
Length = 530
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 157/233 (67%), Gaps = 30/233 (12%)
Query: 2 NENGFKDWKDLWLPELAGRISMVNSPREVIGT----------------QAAAGRIAVQQN 45
N +DW+DLW PELAGRISMV+SPREVIG GR AV +
Sbjct: 276 NLKPIQDWEDLWRPELAGRISMVDSPREVIGAVLKHLGSSYNTVDMEMDVNGGRAAVLNS 335
Query: 46 LALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 105
L QV+LFD +YLK F +GDVW+AVGWSSDV+PA KRMSNVAVVVPKSG+SLWADL
Sbjct: 336 FTQLQKQVQLFDSMNYLKSFSVGDVWVAVGWSSDVIPAAKRMSNVAVVVPKSGSSLWADL 395
Query: 106 WAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV--------------K 151
WAIP A+R +T QIG R RGP PL+HQW +FCLQ+AR+LPF V +
Sbjct: 396 WAIPCATRFQTDQIGSRARGPSPLVHQWFDFCLQSARSLPFRQDVIPGASPLHLESPVPE 455
Query: 152 LPEELLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKP 204
+P++ K KP LDT L+ GVPP EIL RCEFLEPLS L DY+WL++ +Q+P
Sbjct: 456 VPQDKNKRKPKLDTNLVRGVPPPEILERCEFLEPLSGKALEDYQWLMSRVQRP 508
>gi|326516630|dbj|BAJ92470.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518394|dbj|BAJ88226.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519014|dbj|BAJ92667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520335|dbj|BAK07426.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326524998|dbj|BAK04435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/241 (53%), Positives = 162/241 (67%), Gaps = 30/241 (12%)
Query: 2 NENGFKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQN 45
N +DW+DLW PELAG+ISMV+SPREVIG T+ GR AV +
Sbjct: 277 NLKPIQDWEDLWRPELAGKISMVDSPREVIGAVLKQLGSSYNTIDMETEVNGGREAVLNS 336
Query: 46 LALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 105
L QV+LFD +YLK FG+GDVW+ VGWSSDV+PA KRMSNVAVVVPKSG+SLWADL
Sbjct: 337 FTQLQKQVQLFDSMNYLKSFGVGDVWVTVGWSSDVIPAAKRMSNVAVVVPKSGSSLWADL 396
Query: 106 WAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV--------------K 151
WAIP A+R +T +IGGR RGP PLIHQW +FCLQ+AR+LPF +
Sbjct: 397 WAIPCATRFQTDRIGGRTRGPSPLIHQWFDFCLQSARSLPFRQEIIPGASPLFLEHPAPD 456
Query: 152 LPEELLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKPAPVLMKR 211
+P++ K +P L+T L+ GVPP EIL +CEFLEPLS+ + DY+WL++ +Q+P L
Sbjct: 457 VPQDRNKKQPKLETNLVRGVPPPEILEKCEFLEPLSDKAVGDYQWLMSRVQRPRSGLFGN 516
Query: 212 V 212
V
Sbjct: 517 V 517
>gi|242077052|ref|XP_002448462.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
gi|241939645|gb|EES12790.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
Length = 531
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 156/233 (66%), Gaps = 30/233 (12%)
Query: 2 NENGFKDWKDLWLPELAGRISMVNSPREVIGT----------------QAAAGRIAVQQN 45
N +DW+DLW PELAGRISMV+SPRE+IG GR AV +
Sbjct: 277 NLKPIQDWEDLWRPELAGRISMVDSPREIIGAVLKHLGSSYNTVDMEIDVNGGREAVLNS 336
Query: 46 LALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 105
L QV+LFD YLK F +GDVW+AVGWSSDV+PA KRMSNVAVVVPKSG+S+WADL
Sbjct: 337 FTQLQKQVQLFDSMDYLKSFSVGDVWVAVGWSSDVIPAAKRMSNVAVVVPKSGSSIWADL 396
Query: 106 WAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV--------------K 151
WAIP A+R +T QIG R RGP PLIHQW +FCLQ+AR+LPF V +
Sbjct: 397 WAIPCATRFQTDQIGSRTRGPSPLIHQWFDFCLQSARSLPFRQDVIPGASPLYLENPVPE 456
Query: 152 LPEELLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKP 204
+P++ K KP L+T L+ GVPP EIL RCEFLEPLS L DY+WL++ +Q+P
Sbjct: 457 VPQDKNKRKPKLETNLVRGVPPPEILERCEFLEPLSGKALEDYQWLMSKVQRP 509
>gi|28393765|gb|AAO42292.1| unknown protein [Arabidopsis thaliana]
Length = 524
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 130/230 (56%), Positives = 156/230 (67%), Gaps = 32/230 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQNLALL 49
+DW DLW PELAGRI+MVNSPREV+G +Q GR+AV++NLA L
Sbjct: 261 IEDWADLWRPELAGRIAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEENLASL 320
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
Q+RLFD +YLK F +GDVW+ VGWSSDV+P KRMSNV V+VPKSGA+LWADLWAIP
Sbjct: 321 MKQIRLFDSNNYLKAFNVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIP 380
Query: 110 AASRL--ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTR--------------VKLP 153
A S E +Q GGRVRGP PLI+QWIEFCLQ AR+LPF V P
Sbjct: 381 AVSDSGKEAEQRGGRVRGPSPLINQWIEFCLQPARSLPFTREVIPGASPSALDGPLVTEP 440
Query: 154 EELLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQK 203
E+ K + LDT L+ GVPP EIL++CEFLEPL EATLS+Y L+ ++K
Sbjct: 441 EKTKKDRTKLDTNLVTGVPPPEILSKCEFLEPLPEATLSEYRLLIETVRK 490
>gi|12322546|gb|AAG51275.1|AC027135_16 hypothetical protein [Arabidopsis thaliana]
Length = 526
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/230 (56%), Positives = 156/230 (67%), Gaps = 32/230 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQNLALL 49
+DW DLW PELAGRI+MVNSPREV+G +Q GR+AV++NLA L
Sbjct: 263 IEDWADLWRPELAGRIAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEKNLASL 322
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
Q+RLFD +YLK F +GDVW+ VGWSSDV+P KRMSNV V+VPKSGA+LWADLWAIP
Sbjct: 323 MKQIRLFDSNNYLKAFNVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIP 382
Query: 110 AASRL--ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTR--------------VKLP 153
A S E +Q GGRVRGP PLI+QWIEFCLQ AR+LPF V P
Sbjct: 383 AVSDSGKEAEQRGGRVRGPSPLINQWIEFCLQPARSLPFTREVIPGASPSALDGPLVTEP 442
Query: 154 EELLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQK 203
E+ K + LDT L+ GVPP EIL++CEFLEPL EATLS+Y L+ ++K
Sbjct: 443 EKTKKDRTKLDTNLVTGVPPPEILSKCEFLEPLPEATLSEYRLLIETVRK 492
>gi|30692516|ref|NP_174426.2| putrescine-binding periplasmic protein-like protein [Arabidopsis
thaliana]
gi|51536594|gb|AAU05535.1| At1g31410 [Arabidopsis thaliana]
gi|332193231|gb|AEE31352.1| putrescine-binding periplasmic protein-like protein [Arabidopsis
thaliana]
Length = 524
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/230 (56%), Positives = 156/230 (67%), Gaps = 32/230 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQNLALL 49
+DW DLW PELAGRI+MVNSPREV+G +Q GR+AV++NLA L
Sbjct: 261 IEDWADLWRPELAGRIAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEKNLASL 320
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
Q+RLFD +YLK F +GDVW+ VGWSSDV+P KRMSNV V+VPKSGA+LWADLWAIP
Sbjct: 321 MKQIRLFDSNNYLKAFNVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIP 380
Query: 110 AASRL--ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTR--------------VKLP 153
A S E +Q GGRVRGP PLI+QWIEFCLQ AR+LPF V P
Sbjct: 381 AVSDSGKEAEQRGGRVRGPSPLINQWIEFCLQPARSLPFTREVIPGASPSALDGPLVTEP 440
Query: 154 EELLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQK 203
E+ K + LDT L+ GVPP EIL++CEFLEPL EATLS+Y L+ ++K
Sbjct: 441 EKTKKDRTKLDTNLVTGVPPPEILSKCEFLEPLPEATLSEYRLLIETVRK 490
>gi|297846532|ref|XP_002891147.1| hypothetical protein ARALYDRAFT_473635 [Arabidopsis lyrata subsp.
lyrata]
gi|297336989|gb|EFH67406.1| hypothetical protein ARALYDRAFT_473635 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/242 (54%), Positives = 163/242 (67%), Gaps = 34/242 (14%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQNLALL 49
+DW DLW PELAGRI+MVNSPREV+G +Q GRIAV++NLA L
Sbjct: 260 IEDWADLWRPELAGRIAMVNSPREVVGAVLKYMGASYNTTDLDSQVPGGRIAVEKNLASL 319
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
Q+RLFD +YLK F +GDVW+ VGWSSDV+P KRMSNV V+VPKSGA+LWADLWAIP
Sbjct: 320 MKQIRLFDSNNYLKAFNVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIP 379
Query: 110 AASRL--ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTR--------------VKLP 153
A S E +QIGGRVRGP PLI+QWIEFCLQ AR+LPF V+ P
Sbjct: 380 AVSDSGKEAEQIGGRVRGPSPLINQWIEFCLQPARSLPFTREVIPGASPSALDGPLVREP 439
Query: 154 EELLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQKPAPV--LMKR 211
E+ K + LDT L+ GVP EIL++CEFLEPL EATL +Y L+ ++K + L+K+
Sbjct: 440 EKTKKDRTKLDTNLVTGVPLPEILSKCEFLEPLPEATLLEYRLLIETVRKQSQRHGLVKK 499
Query: 212 VQ 213
+Q
Sbjct: 500 IQ 501
>gi|302820071|ref|XP_002991704.1| hypothetical protein SELMODRAFT_133925 [Selaginella moellendorffii]
gi|300140553|gb|EFJ07275.1| hypothetical protein SELMODRAFT_133925 [Selaginella moellendorffii]
Length = 387
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 136/221 (61%), Gaps = 29/221 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQNLALL 49
KDW DLW PELAGRISM+ S REV+G + G+ AV++ L
Sbjct: 165 IKDWDDLWKPELAGRISMIESTREVVGLVLKSLGASYNARNLDAEVHGGQEAVKERFLRL 224
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
Q +FD +YL+ G GDVWIAVGWS+DVLP KR SNV V+ P SG SLWAD+WAIP
Sbjct: 225 RKQA-MFDNINYLRALGAGDVWIAVGWSNDVLPFAKRQSNVGVIAPASGTSLWADVWAIP 283
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLK----------- 158
AA ++++ + GGR+RGP PL+ QW+EFCLQ AR+L F+ L+
Sbjct: 284 AAIKIKSDKAGGRIRGPSPLVSQWLEFCLQPARSLAFHQEAFCGASPLRFADVADNGSSE 343
Query: 159 -GKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P LDT L++G+PP +IL + EFLEPL E TL+ Y WL+
Sbjct: 344 PAGPRLDTNLVSGLPPKDILGKSEFLEPLEEETLAKYRWLL 384
>gi|168015953|ref|XP_001760514.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688211|gb|EDQ74589.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 438
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 142/237 (59%), Gaps = 44/237 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIGT----------------QAAAGRIAVQQNLALLG 50
+DWKDL+ P+LAGRI+MV+SPREV+G GR AV++ L
Sbjct: 168 RDWKDLFQPQLAGRIAMVDSPREVVGAVLKSLGASYNTNDFDADVPGGREAVKERFLALQ 227
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
QVRLFD YLK GDVW+AVGWSSD++P KR SN++V P+SG SLWADLWAIPA
Sbjct: 228 KQVRLFDDNDYLKAMSAGDVWVAVGWSSDIIPYSKRASNISVYAPESGTSLWADLWAIPA 287
Query: 111 ASRLE-TKQIGGRVRGPFPLIHQWIEFCLQTARALPF----------------------- 146
+ E + +GGRVRGP PL+ QW++FCLQ ARA F
Sbjct: 288 TTTFEKAENVGGRVRGPSPLVFQWLDFCLQPARATTFANDVFVGASPLTWSEKSETEISE 347
Query: 147 NTRVKLPEELLKGKP----SLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVA 199
NT ++ KP +LD+ ++ G+PP EI+A+ EFLEPLS+ LSDY+WL++
Sbjct: 348 NTFLETGASQSGKKPKTVVTLDSNIVQGMPPDEIVAKSEFLEPLSDKALSDYQWLLS 404
>gi|302818713|ref|XP_002991029.1| hypothetical protein SELMODRAFT_132900 [Selaginella moellendorffii]
gi|300141123|gb|EFJ07837.1| hypothetical protein SELMODRAFT_132900 [Selaginella moellendorffii]
Length = 387
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 136/221 (61%), Gaps = 29/221 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQNLALL 49
KDW DLW PELAG+ISM+ S REV+G + G+ AV++ L
Sbjct: 165 IKDWDDLWKPELAGKISMIESTREVVGLVLKSLGASYNARNLDAEVHGGQEAVKERFLRL 224
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
Q +F+ +YL+ G GDVWIAVGWS+DVLP KR SNV V+ P SG SLWAD+WAIP
Sbjct: 225 RKQA-MFENINYLRALGAGDVWIAVGWSNDVLPFAKRQSNVGVIAPASGTSLWADVWAIP 283
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLK----------- 158
AA+ +++ + GGR+RGP PL+ QW+EFCLQ AR+L F+ L+
Sbjct: 284 AATTIKSDKAGGRIRGPSPLVSQWLEFCLQPARSLAFHQEAFCGASPLRFADVADNGSSE 343
Query: 159 -GKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P LDT L++G+PP +IL + EFLEPL E TL+ Y WL+
Sbjct: 344 PAGPRLDTNLVSGLPPKDILGKSEFLEPLEEETLAKYRWLL 384
>gi|428774536|ref|YP_007166324.1| extracellular solute-binding protein [Cyanobacterium stanieri PCC
7202]
gi|428688815|gb|AFZ48675.1| extracellular solute-binding protein family 1 [Cyanobacterium
stanieri PCC 7202]
Length = 378
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 25/203 (12%)
Query: 5 GF--KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGN 51
GF KDW DLW EL +IS+++ PRE+IG T V + L L N
Sbjct: 179 GFTPKDWSDLWRVELMNQISLLSQPREIIGLILKKLGYSYNTNNIQEIEDVYRELTTLNN 238
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 111
QV+ +D T+YL+ GD W+AVGWS+D+LP +++ N+ V+P+SG SLWAD+W P
Sbjct: 239 QVKFYDSTNYLQPLINGDTWLAVGWSTDILPVLEQHRNIRAVIPESGTSLWADIWVQPYE 298
Query: 112 SRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGV 171
+ L +++G I++WI +C Q A N K +L + + + ++
Sbjct: 299 NNLSEEKLGE--------IYRWINYCWQEDSATRINFFTKGNSPILSAENANNRLQMS-- 348
Query: 172 PPAEILARCEFLEPLSEATLSDY 194
EI A+ EF+EPL E ++ Y
Sbjct: 349 --EEIFAKSEFIEPLPETIMAQY 369
>gi|113476419|ref|YP_722480.1| periplasmic polyamine-binding protein of ABC transporter
[Trichodesmium erythraeum IMS101]
gi|110167467|gb|ABG52007.1| periplasmic polyamine-binding protein of ABC transporter
[Trichodesmium erythraeum IMS101]
Length = 382
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 114/218 (52%), Gaps = 30/218 (13%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQN----------LALLGNQVRL 55
KDW DLW PEL G IS++N REVIG T G+ +N L L QV+
Sbjct: 177 KDWSDLWRPELKGNISLLNQAREVIGLTLKKLGKSYNTKNIDQVEKLKAELVKLNQQVKF 236
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ +YL+ IGD W+AVGWS+D+LP +K+ +A VVP+SG +LWA+LW PAAS
Sbjct: 237 YSSNNYLQPLIIGDTWLAVGWSNDILPLLKKRKKIAAVVPQSGTALWANLWVKPAASPEN 296
Query: 116 TKQIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLKGKPSLDTKLIAGVP- 172
+ L +WI FC Q A+ + T+ P + K P+ I P
Sbjct: 297 S------------LTEKWINFCWQPQVAQQMSIITQTSSP-IMPKINPNELISDIKNNPL 343
Query: 173 ---PAEILARCEFLEPLSEATLSDYEWLVANLQKPAPV 207
P EI+ + EFL PL+ +T+ Y+ L +++P +
Sbjct: 344 LLLPQEIIEKSEFLAPLANSTIEQYQKLWQEIRQPVHI 381
>gi|422303925|ref|ZP_16391274.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9806]
gi|389791060|emb|CCI13120.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9806]
Length = 382
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 110/212 (51%), Gaps = 39/212 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
+DW DLW PEL+G+I+++++ REVIG + +++ L L QVR
Sbjct: 181 QDWSDLWRPELSGKIALIDNRREVIGLTLKKLGYSYNSSNLKQVTSLKDQLFALQKQVRF 240
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ HYL+ +GDVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P +
Sbjct: 241 YSSQHYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTT-- 298
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP-- 173
P L+ QWI FC Q+ A T++ L L P + T+ +PP
Sbjct: 299 ----------PNSLVDQWINFCWQSESA----TKISLFTSGL--SPLILTQNPDQIPPDI 342
Query: 174 --------AEILARCEFLEPLSEATLSDYEWL 197
E + + +FL PLS AT +YE L
Sbjct: 343 KNNPLLVNPEAVKKSDFLNPLSPATEQEYEQL 374
>gi|428769711|ref|YP_007161501.1| periplasmic polyamine-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428683990|gb|AFZ53457.1| periplasmic polyamine-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 380
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 107/202 (52%), Gaps = 28/202 (13%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNLALLGN----------QVRL 55
+DW+DLW PE+ R S++N PREVIG G +NL + N QV+
Sbjct: 188 QDWEDLWKPEIKHRFSLLNQPREVIGLVLKKLGYSYNTKNLKQINNLLPELKTLNQQVKF 247
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+D +YL+ +GD W+AVGWS+D++P ++R N+ V+P SG SLWAD+W P E
Sbjct: 248 YDSRNYLQPLILGDTWLAVGWSTDIIPLIERYHNIKAVIPLSGTSLWADIWVKPRNQSSE 307
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQ--TARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP 173
++ I+ WI+FC Q +AR + + P E + + L++
Sbjct: 308 LEK-----------IYNWIDFCWQSKSARQISLFSSGISPVETNFSETNRQIPLMS---- 352
Query: 174 AEILARCEFLEPLSEATLSDYE 195
E+LA+ EF+EPL ++YE
Sbjct: 353 PEVLAKSEFIEPLESQFFAEYE 374
>gi|428223996|ref|YP_007108093.1| extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
gi|427983897|gb|AFY65041.1| extracellular solute-binding protein family 1 [Geitlerinema sp. PCC
7407]
Length = 388
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 116/226 (51%), Gaps = 38/226 (16%)
Query: 1 MNENGFK---DWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQNLA---------- 47
NG + DW DLW P L GR+S+++ REVIG ++ N+A
Sbjct: 175 FERNGLRPPQDWADLWQPGLRGRLSLLDQEREVIGL--VLKKLGQSYNVADPTTVTGLVE 232
Query: 48 ---LLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 104
L QV+ ++ T YL+ +GD W AVGWS+DVLP ++ ++AVVVP+SG +LWAD
Sbjct: 233 EARSLHQQVKFYNSTAYLEPLLLGDTWAAVGWSTDVLPLLESQRHLAVVVPQSGTALWAD 292
Query: 105 LWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLD 164
+W AA E Q L+++WI+FC A A F+ + ++ PSLD
Sbjct: 293 VWVQAAAPASEAVQ---------DLMNEWIDFCWNPAIAGQFSLVSRAVSPIV---PSLD 340
Query: 165 TKLIAG--------VPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
+ +PP E+L RCEFLEPL EA Y L +L+
Sbjct: 341 RSTLPQSLQDNSILLPPPEVLERCEFLEPLPEAAKQTYTQLWRSLR 386
>gi|209522903|ref|ZP_03271460.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|376001837|ref|ZP_09779691.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|423062300|ref|ZP_17051090.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
gi|209496490|gb|EDZ96788.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|375329748|emb|CCE15444.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|406716208|gb|EKD11359.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
Length = 371
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 107/212 (50%), Gaps = 42/212 (19%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNLAL----------LGNQVRLF 56
DW+DLW E GRIS+++ REVIG T G +L L L VRL+
Sbjct: 166 DWQDLWRSECQGRISLLDQAREVIGLTLKKLGYSYNTPDLDLVPDLKAELEQLHQNVRLY 225
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
D +YLK +GD W+AVGWS D+ P V+R N+A+ +PKSG +LW+D+W P A+
Sbjct: 226 DSNNYLKPLILGDTWLAVGWSGDISPQVQRQHNIAIAIPKSGTALWSDVWVKPIATSATN 285
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARALPFN-------------TRVKLPEELLKGKPSL 163
PL+ WI+FC Q A + +R LP++ L+ P L
Sbjct: 286 N----------PLVQAWIDFCWQPEIATQMSLLTGATSPIVWGMSRADLPKD-LRENPQL 334
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
+P +IL R EFL PL+ A++ Y+
Sbjct: 335 -------LPDTDILERSEFLLPLTVASMQQYQ 359
>gi|443657684|ref|ZP_21131934.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Microcystis aeruginosa DIANCHI905]
gi|159027984|emb|CAO87944.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333157|gb|ELS47731.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Microcystis aeruginosa DIANCHI905]
Length = 382
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 110/212 (51%), Gaps = 39/212 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGR----------IAVQQNLALLGNQVRL 55
+DW DLW PEL G+I+++++ REVIG T G ++ L L QVR
Sbjct: 181 QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNASDLKQVTGLKDQLFALQKQVRF 240
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ +YL+ +GDVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P +
Sbjct: 241 YSSQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTT-- 298
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP-- 173
P L+ QWI+FC Q A T++ L L P + T+ + +PP
Sbjct: 299 ----------PNSLVQQWIDFCWQPESA----TKISLFTSGL--SPLILTENLDQIPPDI 342
Query: 174 --------AEILARCEFLEPLSEATLSDYEWL 197
E + + +FL PLS AT +YE L
Sbjct: 343 KNNPLLVNPEAVKKSDFLNPLSPATEQEYEQL 374
>gi|414075874|ref|YP_006995192.1| solute-binding protein [Anabaena sp. 90]
gi|413969290|gb|AFW93379.1| solute-binding protein [Anabaena sp. 90]
Length = 376
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 105/211 (49%), Gaps = 44/211 (20%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLF 56
DW DLW EL RIS++N PREVIG T+ A++ L L QV+ +
Sbjct: 178 DWSDLWRSELQNRISLLNHPREVIGLVLKKLGKSYNTENIKQISALKPELQALNQQVKFY 237
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
D +YL+ GD W+AVGWS D++P + R A VVP+SG ++W DLW P
Sbjct: 238 DSQNYLEPLITGDTWLAVGWSHDIIPVISRYQKFAAVVPQSGTAIWTDLWVSPT------ 291
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQ--TARALPFNTRVKLPEELLKGKPSLDTKLIAG---- 170
G G L +QW++FCLQ T++ + T+ P +D ++ G
Sbjct: 292 ---GVSNDG---LAYQWLDFCLQPNTSKQIALLTKSNSP---------VDNAMVLGDIQK 336
Query: 171 ------VPPAEILARCEFLEPLSEATLSDYE 195
+ AEILA+ EF+ PL A + +YE
Sbjct: 337 QLQNLLLTDAEILAKSEFILPLPPAVMKEYE 367
>gi|425472395|ref|ZP_18851246.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9701]
gi|389881535|emb|CCI37923.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9701]
Length = 382
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 27/206 (13%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
+DW DLW PEL G+I+++++ REVIG + + ++ L L QV+
Sbjct: 181 QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLKQVMGLKDQLFALQKQVKF 240
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ HYL+ +GDVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P +
Sbjct: 241 YSSQHYLQPLILGDVWVSVGWSNDILPVSNRYNKIKVVVPKSGTSLWSDVWVKPVLTT-- 298
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVK-LPEELLKGKPSLDTKLIAGVP-- 172
P L+ QWI+FC Q A + L +L P + I P
Sbjct: 299 ----------PNSLVQQWIDFCWQPESATKISLFTSGLSPLILTENPDQISPDIRNNPLL 348
Query: 173 -PAEILARCEFLEPLSEATLSDYEWL 197
E + + +FL PLS AT +YE L
Sbjct: 349 VNPEAVKKSDFLNPLSPATEQEYEQL 374
>gi|166363771|ref|YP_001656044.1| periplasmic polyamine-binding protein [Microcystis aeruginosa
NIES-843]
gi|166086144|dbj|BAG00852.1| periplasmic polyamine-binding protein [Microcystis aeruginosa
NIES-843]
Length = 382
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 106/206 (51%), Gaps = 27/206 (13%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGR----------IAVQQNLALLGNQVRL 55
+DW DLW PEL G+I+++++ REVIG T G + ++ L L QV+
Sbjct: 181 QDWSDLWRPELTGKIALIDNRREVIGLTLKKMGYSYNSSDLKQVMGLKDQLFALQKQVKF 240
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ HYL+ +GDVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P +
Sbjct: 241 YSSQHYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTT-- 298
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVK-LPEELLKGKPSLDTKLIAGVP-- 172
P L+ QWI+FC Q A + L +L P + I P
Sbjct: 299 ----------PNSLVEQWIDFCWQPESATKISLFTSGLSPLILTQNPDQISPDIRNNPLL 348
Query: 173 -PAEILARCEFLEPLSEATLSDYEWL 197
E + + +FL PLS AT +YE L
Sbjct: 349 VNPEAIKKSDFLNPLSPATEQEYEQL 374
>gi|17227795|ref|NP_484343.1| periplasmic polyamine-binding protein of ABC transporter [Nostoc
sp. PCC 7120]
gi|17135277|dbj|BAB77823.1| periplasmic polyamine-binding protein of ABC transporter [Nostoc
sp. PCC 7120]
Length = 388
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 108/210 (51%), Gaps = 26/210 (12%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
+DW DLW EL RIS+++ PRE+IG T+ A +++ L QV++
Sbjct: 190 QDWSDLWRSELRSRISVLDQPREIIGLVLKKLGKSYNTENLATVPDLEKELQTFNQQVKI 249
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ YL+ +GD W+AVGWSSD++P + R ++VV+P+SG S+WADLW P E
Sbjct: 250 YSSNTYLEPLILGDTWLAVGWSSDLIPVLARYPQLSVVIPRSGTSIWADLWVSPK----E 305
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQ--TARALPFNTRVKLPEELLKGKPSLDTKLIA-GVP 172
T + G L QWI+FCLQ AR + T+ P G + L +
Sbjct: 306 TAKDG--------LSSQWIDFCLQPNIARQIALLTKTNSPVATNIGTADIQESLGGLFLN 357
Query: 173 PAEILARCEFLEPLSEATLSDYEWLVANLQ 202
E+ A+ EFL PLS YE L A ++
Sbjct: 358 SQEVFAKGEFLLPLSPEATKQYEALFAKIK 387
>gi|427734714|ref|YP_007054258.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
gi|427369755|gb|AFY53711.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
Length = 388
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 114/220 (51%), Gaps = 39/220 (17%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRI----------AVQQNLALLGNQVR 54
+DW DLW EL GRIS++N PREVIG T G+ ++++ L +L QV+
Sbjct: 183 IEDWSDLWREELKGRISLLNQPREVIGLTLKKLGKSYNSENLQSIKSLKEELQVLNQQVK 242
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
++ T+Y++ +GD W+AVGWS+D++ V R + VVVP SG +LWADLW P
Sbjct: 243 FYNSTNYIEPLILGDTWLAVGWSNDIVSLVSRYPQLGVVVPNSGTALWADLWVQP----- 297
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLKGKPSLDTKLIAGVP 172
K G + L ++WI+FC Q A+ + T+ P +DT++ A
Sbjct: 298 --KVTGKKDETQESLSNKWIDFCWKPQIAKQIAVLTKANSP---------IDTEIPASEI 346
Query: 173 PA----------EILARCEFLEPLSEATLSDYEWLVANLQ 202
P E+ + EFL PLS + + +Y+ L ++
Sbjct: 347 PKPLQNLLSANPEVFEKSEFLLPLSSSAVKEYDSLFREMK 386
>gi|409993345|ref|ZP_11276490.1| periplasmic polyamine-binding protein of ABC transporter
[Arthrospira platensis str. Paraca]
gi|291567216|dbj|BAI89488.1| putative ABC transporter substrate-binding protein [Arthrospira
platensis NIES-39]
gi|409935824|gb|EKN77343.1| periplasmic polyamine-binding protein of ABC transporter
[Arthrospira platensis str. Paraca]
Length = 389
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 106/212 (50%), Gaps = 42/212 (19%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNLAL----------LGNQVRLF 56
DW+DLW E GRIS++N REVIG T G +L L L VRL+
Sbjct: 184 DWEDLWRSECKGRISLLNQGREVIGLTLKKLGYSYNTPDLDLVPDLKAQLEQLHQNVRLY 243
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
D +YLK +GD W+AVGWS D+ P ++R N+A+ +PKSG +LW+D+W P A+
Sbjct: 244 DSDNYLKPLILGDTWLAVGWSGDISPQLQRQHNIAIAIPKSGTALWSDVWVKPKATSATN 303
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARALPFNT-------------RVKLPEELLKGKPSL 163
PL+ WI+FC Q A + R LP++ L+ P L
Sbjct: 304 N----------PLVQAWIDFCWQPEIATQMSLLTGATSPIVWGMPRADLPKD-LRENPQL 352
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
+P +IL R EFL PL+ A++ Y+
Sbjct: 353 -------LPDTDILDRSEFLLPLTVASMQQYQ 377
>gi|425459716|ref|ZP_18839202.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9808]
gi|389827779|emb|CCI20808.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9808]
Length = 382
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 39/212 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
+DW DLW PEL G+I+++++ REVIG + ++ L L QVR
Sbjct: 181 QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLKQVTGLKDQLFALQKQVRF 240
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ HYL+ +GDVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P +
Sbjct: 241 YSSQHYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTT-- 298
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP-- 173
P L+ QWI+FC Q A ++ L L P + T+ +PP
Sbjct: 299 ----------PNSLVQQWIDFCWQPESA----NKISLFTSGL--SPLILTENPDQIPPDI 342
Query: 174 --------AEILARCEFLEPLSEATLSDYEWL 197
E + + +FL PLS AT +YE L
Sbjct: 343 RNNPLLVNPEAVKKSDFLNPLSPATEQEYEQL 374
>gi|425434255|ref|ZP_18814726.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9432]
gi|389676326|emb|CCH94643.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9432]
Length = 382
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 108/212 (50%), Gaps = 39/212 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGR----------IAVQQNLALLGNQVRL 55
+DW DLW PEL G+I+++++ REVIG T G ++ L L QVR
Sbjct: 181 QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNYSDLKQVTGLKDQLFALQKQVRF 240
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ HYL+ +GDVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P +
Sbjct: 241 YSSQHYLQPLILGDVWLSVGWSNDILPVSDRHNKIKVVVPKSGTSLWSDVWVKPVLTT-- 298
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP-- 173
P L+ QWI+FC Q A ++ L L P + T+ +PP
Sbjct: 299 ----------PNSLVQQWIDFCWQPESA----NKISLFTSGL--SPLILTENPDQIPPDI 342
Query: 174 --------AEILARCEFLEPLSEATLSDYEWL 197
E + + +FL PLS AT +YE L
Sbjct: 343 RNNPLLVNPEAVKKSDFLNPLSPATEQEYEQL 374
>gi|411118674|ref|ZP_11391054.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710537|gb|EKQ68044.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 407
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 103/205 (50%), Gaps = 30/205 (14%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLF 56
DW DLW +L RI+++N+PREVIG T+ A +QQ L LL QV+ +
Sbjct: 206 DWSDLWRKDLRRRIALLNNPREVIGLTLKKLGKSYNTEDLASVPTLQQELNLLQEQVKYY 265
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
T YL+ + DVW+AVGWS+DVLP ++R +A + P+SG +L ADLW PA +
Sbjct: 266 SSTSYLQPLLLDDVWLAVGWSTDVLPLMQRSRQIAAIAPRSGTALSADLWVHPAMTSTAL 325
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG------ 170
QWIEFC QT A + L G P DT+L+A
Sbjct: 326 PAAA----------LQWIEFCWQTKIATQLSLATWAVSPSLIGTP--DTQLLAQFRDYPA 373
Query: 171 -VPPAEILARCEFLEPLSEATLSDY 194
+P +IL EFL PLSE Y
Sbjct: 374 LLPNIDILQASEFLLPLSETATKQY 398
>gi|425439720|ref|ZP_18820036.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9717]
gi|389720001|emb|CCH96242.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9717]
Length = 382
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 27/206 (13%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
+DW DLW PEL G+I+++++ REVIG + A++ L L QV+
Sbjct: 181 QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLKQVTALKDQLFALQKQVKF 240
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ +YL+ +GDVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P +
Sbjct: 241 YSYQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTT-- 298
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVK-LPEELLKGKPSLDTKLIAGVP-- 172
P L+ QWI+FC Q A + L +L P + I P
Sbjct: 299 ----------PNSLVEQWIDFCWQPESATKISLFTSGLSPLILTQNPDQISPDIRNNPLL 348
Query: 173 -PAEILARCEFLEPLSEATLSDYEWL 197
E + + +FL PLS AT +YE L
Sbjct: 349 VNPEAIKKSDFLNPLSPATEQEYEQL 374
>gi|425467732|ref|ZP_18847011.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9809]
gi|389829411|emb|CCI29285.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9809]
Length = 382
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 105/206 (50%), Gaps = 27/206 (13%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGR----------IAVQQNLALLGNQVRL 55
+DW DLW PEL G+I+++++ REVIG T G A++ L L QV+
Sbjct: 181 QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNYSDLKQVTALKDQLFALQKQVKF 240
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ +YL+ +GDVW++VGWS+D+LP R + VVVPKSG SLW+D+W P +
Sbjct: 241 YSSQYYLQPLILGDVWLSVGWSNDILPVSDRYKKIKVVVPKSGTSLWSDVWVKPVLTT-- 298
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVK-LPEELLKGKPSLDTKLIAGVP-- 172
P L+ QWI+FC Q A + L +L P + I P
Sbjct: 299 ----------PNSLVEQWIDFCWQPESATKISLFTSGLSPLILTQNPDQISPDIRNNPLL 348
Query: 173 -PAEILARCEFLEPLSEATLSDYEWL 197
E + + +FL PLS AT +YE L
Sbjct: 349 VNPEAIKKSDFLNPLSPATEQEYEQL 374
>gi|440756421|ref|ZP_20935622.1| twin-arginine translocation pathway signal sequence domain protein
[Microcystis aeruginosa TAIHU98]
gi|440173643|gb|ELP53101.1| twin-arginine translocation pathway signal sequence domain protein
[Microcystis aeruginosa TAIHU98]
Length = 382
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 108/212 (50%), Gaps = 39/212 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
+DW DLW PEL G+I+++++ REVIG + + ++ L L QVR
Sbjct: 181 QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLKQVMGLKDQLFALQKQVRF 240
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ +YL+ +GDVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P +
Sbjct: 241 YSSQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTT-- 298
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP-- 173
P L+ QWI+FC Q A ++ L L P + T+ +PP
Sbjct: 299 ----------PNSLVQQWIDFCWQPESA----NKISLFTSGL--SPLILTENPDQIPPDI 342
Query: 174 --------AEILARCEFLEPLSEATLSDYEWL 197
E + + +FL PLS AT +YE L
Sbjct: 343 RNNPLLVNPEAVKKSDFLNPLSPATEQEYEQL 374
>gi|425443832|ref|ZP_18823896.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9443]
gi|389733602|emb|CCI02643.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9443]
Length = 382
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 107/206 (51%), Gaps = 27/206 (13%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
+DW DLW PEL G+I+++++ REVIG + + ++ L L QVR
Sbjct: 181 QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLKQVMGLKDQLFALQKQVRF 240
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ +YL+ +GDVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P +
Sbjct: 241 YSSQYYLQPLILGDVWLSVGWSNDILPVGDRYNKIKVVVPKSGTSLWSDVWVKPVLTT-- 298
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQ--TARALPFNTRVKLPEELLKGKPSL--DTKLIAGV 171
P L+ QWI+FC Q +A + T P L + + D K +
Sbjct: 299 ----------PNSLVQQWIDFCWQPESANKISLFTSGLSPLVLTENPDQIPSDIKNNPLL 348
Query: 172 PPAEILARCEFLEPLSEATLSDYEWL 197
E + + +FL PLS AT +YE L
Sbjct: 349 VNPEAIKKSDFLNPLSPATEQEYEQL 374
>gi|282899638|ref|ZP_06307602.1| periplasmic polyamine-binding protein of ABC transporter
[Cylindrospermopsis raciborskii CS-505]
gi|281195517|gb|EFA70450.1| periplasmic polyamine-binding protein of ABC transporter
[Cylindrospermopsis raciborskii CS-505]
Length = 394
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 110/213 (51%), Gaps = 27/213 (12%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQN----------LALLGNQVRL 55
+DW DLW +L RIS+ N PREVIG GR N L L QV+
Sbjct: 190 RDWGDLWRSDLRSRISLPNHPREVIGLVLKKLGRSYNTVNPVKISNLNIELESLNQQVKF 249
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+D T+YL+ GD W+AVGWS+D++P + R + V+P+SG ++WADLW PA + L
Sbjct: 250 YDSTNYLEPLITGDTWLAVGWSNDIIPILSRYPQLRAVIPQSGTAIWADLWVQPANT-LM 308
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPF------NTRVKLPEELLKGKPSLDTKLIA 169
T++ LI QWI+FC Q A NT + ++G L+A
Sbjct: 309 TEETDN-------LISQWIDFCWQPDIAGQIVMLGKTNTPTFINTSKVQGISDSIQNLLA 361
Query: 170 GVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
E+L +CEFL+PLS +++ YE L ++
Sbjct: 362 --IEQELLEKCEFLKPLSLESINQYEELFLKMK 392
>gi|425451461|ref|ZP_18831282.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
7941]
gi|389767205|emb|CCI07314.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
7941]
Length = 392
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 39/212 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGR----------IAVQQNLALLGNQVRL 55
+DW DLW PEL G+I+++++ REVIG T G ++ L L QVR
Sbjct: 181 QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNYSDLKQVTGLKDQLFALQKQVRF 240
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ +YL+ +GDVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P +
Sbjct: 241 YSSQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTT-- 298
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP-- 173
P L+ QWI+FC Q A ++ L L P + T+ +PP
Sbjct: 299 ----------PNSLVEQWIDFCWQPESA----NKISLFTSGL--SPLILTENPDQIPPDI 342
Query: 174 --------AEILARCEFLEPLSEATLSDYEWL 197
E + + +FL PLS AT +YE L
Sbjct: 343 RNNPLLVNPEAVKKSDFLNPLSPATEQEYEQL 374
>gi|434391078|ref|YP_007126025.1| periplasmic polyamine-binding protein of ABC transporter
[Gloeocapsa sp. PCC 7428]
gi|428262919|gb|AFZ28865.1| periplasmic polyamine-binding protein of ABC transporter
[Gloeocapsa sp. PCC 7428]
Length = 378
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 102/208 (49%), Gaps = 38/208 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNLALLGN----------QVRL 55
DW DLW PEL RIS+V+ REVIG T G+ QNL + N QVRL
Sbjct: 180 NDWSDLWRPELRSRISIVDQSREVIGLTLKRLGQSYNAQNLDQIPNLEEQLQALHQQVRL 239
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ Y++ IGD W+AVGWS+DVLP ++R +AVVVP+SG +LWAD+W P + L
Sbjct: 240 YSSNRYIEPLIIGDTWVAVGWSTDVLPILRRYREIAVVVPRSGTALWADVWVNPINAALP 299
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKL--IAGVPP 173
T L QWI+FC Q A + R G + +L +G P
Sbjct: 300 T------------LASQWIDFCWQPQIAQQISLRT-------HGTSPIAVQLPPASGQNP 340
Query: 174 AEI------LARCEFLEPLSEATLSDYE 195
I L + EFL PLS YE
Sbjct: 341 TRIEFTDAQLQQSEFLLPLSATAQHQYE 368
>gi|282898041|ref|ZP_06306036.1| periplasmic polyamine-binding protein of ABC transporter
[Raphidiopsis brookii D9]
gi|281197185|gb|EFA72086.1| periplasmic polyamine-binding protein of ABC transporter
[Raphidiopsis brookii D9]
Length = 275
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 109/205 (53%), Gaps = 25/205 (12%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQN----------LALLGNQVRLF 56
DW DLW +L RIS+ N PREVIG GR N L L QV+ +
Sbjct: 70 DWSDLWRSDLRSRISLPNHPREVIGLVLKKLGRSYNTVNPVEIPNLKIELESLNQQVKFY 129
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL-E 115
+ T+YL+ GD W+AVGWS+D++P + R + V+P+SG ++WAD+W PA + + E
Sbjct: 130 ESTNYLEPLITGDTWLAVGWSNDIIPILSRYPQLRAVIPQSGTAIWADIWVQPANTLITE 189
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQ--TARALPFNTRVKLPEELLKGKP---SLDTKLIAG 170
T + LI QWI+FC Q AR + + P + K S DT+ +
Sbjct: 190 TDKTDN-------LILQWIDFCWQPDIARQIVMLGKTNTPTFVNTSKVQGISDDTQNLL- 241
Query: 171 VPPAEILARCEFLEPLSEATLSDYE 195
V E+L +CEFL+PLS +++ YE
Sbjct: 242 VIEHELLEKCEFLKPLSLESINQYE 266
>gi|425456329|ref|ZP_18836040.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9807]
gi|389802604|emb|CCI18362.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9807]
Length = 382
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 105/206 (50%), Gaps = 27/206 (13%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGR----------IAVQQNLALLGNQVRL 55
+DW DLW PEL G+I+++++ REVIG T G + ++ L L +VR
Sbjct: 181 QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNYSDLKQVMGLKDQLFALQKRVRF 240
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ +YL+ +GDVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P +
Sbjct: 241 YSSQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTT-- 298
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVK-LPEELLKGKPSLDTKLIAGVP-- 172
P L+ QWI+FC Q A + L +L P I P
Sbjct: 299 ----------PNSLVEQWIDFCWQPESATKISLFTSGLSPLVLTENPDQIPSDIKNNPLL 348
Query: 173 -PAEILARCEFLEPLSEATLSDYEWL 197
E + + +FL PLS AT +YE L
Sbjct: 349 VNPEAIKKSDFLNPLSPATEQEYEQL 374
>gi|390439185|ref|ZP_10227598.1| Genome sequencing data, contig C304 [Microcystis sp. T1-4]
gi|389837404|emb|CCI31722.1| Genome sequencing data, contig C304 [Microcystis sp. T1-4]
Length = 382
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 39/212 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
+DW DLW PEL G+I+++++ REVIG + ++ L L QV+
Sbjct: 181 QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLKQVTGLKDELFALQKQVKF 240
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ +YL+ +GD+W++VGWS+D+LP R + VVVP SG SLW+D+W P +
Sbjct: 241 YSSQYYLQPLILGDIWLSVGWSNDILPVSDRYKKIKVVVPNSGTSLWSDVWVKPVLTT-- 298
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP-- 173
P L+ QWI+FC Q A T++ L L P + T+ +PP
Sbjct: 299 ----------PNSLVQQWIDFCWQPESA----TKISLFTSGL--SPLIPTENPDQIPPDI 342
Query: 174 --------AEILARCEFLEPLSEATLSDYEWL 197
E + + +FL PLS AT +YE L
Sbjct: 343 KNNPLLVNPEAIKKSDFLNPLSPATEQEYEQL 374
>gi|428311092|ref|YP_007122069.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
gi|428252704|gb|AFZ18663.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
Length = 432
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 109/223 (48%), Gaps = 44/223 (19%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNLALLGN----------QVRL 55
KDW DLW PEL RIS+++ PREVIG T G +NL+ + N QV+
Sbjct: 208 KDWSDLWRPELRDRISLLDQPREVIGLTLKKLGFSYNHKNLSQVPNLKEELLKLHQQVKY 267
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA----- 110
+ YL+ +GD W+A+GWS+DVL + +VP SG +LWAD+W PA
Sbjct: 268 YSSNQYLEPLLLGDTWLALGWSTDVLSVQSGYRQIDSIVPLSGTALWADVWVQPAPIAAR 327
Query: 111 -----ASRLETKQIGGRVRGPFPLIHQWIEFCLQ----------TARALPFNTRV---KL 152
S T Q V PL QWIEFC + + A P V KL
Sbjct: 328 SNTVKTSASSTPQQDSSVN--MPLTKQWIEFCWKPLPAQQISVLSHAASPMFADVEPTKL 385
Query: 153 PEELLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
P+ L + +L+ VP +++L +CEFLEPL + DYE
Sbjct: 386 PKTL------RENRLL--VPDSKVLKKCEFLEPLPQEISQDYE 420
>gi|75909270|ref|YP_323566.1| periplasmic polyamine-binding protein of ABC transporter [Anabaena
variabilis ATCC 29413]
gi|75702995|gb|ABA22671.1| periplasmic polyamine-binding protein of ABC transporter [Anabaena
variabilis ATCC 29413]
Length = 388
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 106/210 (50%), Gaps = 26/210 (12%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
+DW DLW EL RIS+++ PREVIG + A +++ L L QV+
Sbjct: 190 QDWSDLWRNELRSRISLLDQPREVIGLVLKKLGKSYNIENLATVPDLEKELQTLNQQVKF 249
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ YL+ IGD W+AVGWSSDV+P + R +++V+P+SG S+WADLW P
Sbjct: 250 YSSNTYLEPLIIGDTWLAVGWSSDVIPVLARYPQLSLVIPRSGTSIWADLWVSP------ 303
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQ--TARALPFNTRVKLPEELLKGKPSLDTKLIA-GVP 172
K+I L QWI+FCLQ AR + T+ P G + L + +
Sbjct: 304 -KEITQDA-----LSSQWIDFCLQPNIARQIALLTKTNSPVVTNIGTADIQESLGSLLLN 357
Query: 173 PAEILARCEFLEPLSEATLSDYEWLVANLQ 202
E+ A+ EFL PL YE L A ++
Sbjct: 358 SQEVFAKGEFLLPLPPEATKQYEALFAKIK 387
>gi|443329204|ref|ZP_21057792.1| spermidine/putrescine-binding periplasmic protein [Xenococcus sp.
PCC 7305]
gi|442791149|gb|ELS00648.1| spermidine/putrescine-binding periplasmic protein [Xenococcus sp.
PCC 7305]
Length = 393
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 39/213 (18%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLF 56
DW DLW PELAG+IS++++ RE+IG + ++ LA L QV+ +
Sbjct: 181 DWADLWRPELAGQISLLDNYREIIGLTLKKLGHSYNSSNLTAITNLESELATLHQQVKFY 240
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN-VAVVVPKSGASLWADLWAIPAASRLE 115
T YL+ +GD+W AVGWS+D+LP V+R + + +VVP SG SLWADLW P
Sbjct: 241 SSTKYLQPLALGDLWAAVGWSTDILPLVRRYPDKIGMVVPASGTSLWADLWVQPTVD--- 297
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARA-------------LPFNTRVKLPEELLKGKPS 162
IG RV + WI+FC Q + A L +V+L +EL +
Sbjct: 298 -GSIGDRVERR---LASWIDFCWQDSSASTLMLFTNGISPILNQENQVELTKELKNNQDF 353
Query: 163 LDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
+ + L ++ + +F+EPL+ +Y+
Sbjct: 354 IQSSL-------KLFSNSDFIEPLTTEVTQEYQ 379
>gi|332706228|ref|ZP_08426297.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
gi|332355065|gb|EGJ34536.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
Length = 396
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNL--------AL--LGNQVRLF 56
DW DLW L RIS++N PREVIG T G QQ+L AL L QV+ +
Sbjct: 186 DWSDLWRESLRDRISVLNHPREVIGLTLKNLGLSYNQQDLNQVKDLKPALRQLAKQVKFY 245
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
HYLK +GD W+AVGWS+D+L R + VVP+SG +LW+D+W P + +
Sbjct: 246 SSDHYLKPLVLGDTWVAVGWSTDILALRTRDRQIEAVVPQSGTALWSDVWVKPVSVSSAS 305
Query: 117 KQIGGRVRGPFPLIHQWIEFC--LQTARALPFNTR------VKLPEELLKGKPSLDTKLI 168
+WIEFC ++A+ + T +K+P L P L
Sbjct: 306 DSSESNSESDL--SKKWIEFCWDSKSAKQISLLTNAASPILLKIPRNKL---PQDIQTLP 360
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYE 195
+P AEIL +CEFL PL E+T YE
Sbjct: 361 LLLPEAEILNKCEFLHPLPESTQKQYE 387
>gi|354567783|ref|ZP_08986951.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
gi|353542241|gb|EHC11705.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
Length = 382
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 102/218 (46%), Gaps = 44/218 (20%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLF 56
DW DLW EL RIS++N PREVIG T+ ++ L L QV+ +
Sbjct: 185 DWSDLWRTELRDRISLLNHPREVIGLVLKKLGKSYNTENLDAIPGLEAELRALNQQVKFY 244
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
D T YL+ IGD W+AVGWS DVLP V R +AVV P SG +LWAD+W P
Sbjct: 245 DSTRYLEPLIIGDTWLAVGWSDDVLPVVTRYPQLAVVTPLSGTALWADVWVKPMGINQAN 304
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQ------------TARALPFNTRVKLPEELLKGKPSLD 164
L ++WI+FC Q T +P N R +E ++
Sbjct: 305 ------------LAYKWIDFCWQPNIAEQIFILTKTNSPIPTNIRASNIQEQIRN----- 347
Query: 165 TKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
+ EIL + EFL+PL A + Y+ + A ++
Sbjct: 348 ----FLLNNDEILGKSEFLQPLPLAVAAQYKSIFAKIK 381
>gi|434405536|ref|YP_007148421.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
gi|428259791|gb|AFZ25741.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
Length = 382
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 105/217 (48%), Gaps = 40/217 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
+DW DLW EL RIS++N PREVIG T+ +Q L L QV+
Sbjct: 184 RDWNDLWRDELQQRISLLNQPREVIGLVLKKLGKSYNTENLDQIPELQTELQKLNQQVKF 243
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ +YL+ IGD W+AVGWSSD++P + R + VV+P+SG ++WADLW P
Sbjct: 244 YSSNNYLEPLIIGDTWLAVGWSSDIVPLLGRYPQLTVVIPQSGTAIWADLWVRPTGV--- 300
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG----- 170
G L +QWI+FC Q A ++ L L K + T ++A
Sbjct: 301 ---------GKASLPYQWIDFCWQPNIA----KQISL---LTKSNSPISTNIVASDIQEP 344
Query: 171 -----VPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
+ +I + EFL PLS + YE L + L+
Sbjct: 345 LQNLLLTNPQIFQKSEFLLPLSLSATKQYESLFSKLK 381
>gi|434397206|ref|YP_007131210.1| extracellular solute-binding protein family 1 [Stanieria
cyanosphaera PCC 7437]
gi|428268303|gb|AFZ34244.1| extracellular solute-binding protein family 1 [Stanieria
cyanosphaera PCC 7437]
Length = 383
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 101/216 (46%), Gaps = 49/216 (22%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-----------LALLGNQVRL 55
KDW+DLW +L RIS+V+ PREVIG + N LA L Q++
Sbjct: 181 KDWQDLWHQDLRDRISIVDQPREVIGLTLKKLGYSYNTNDLNKIPNLSSELAALHQQIKF 240
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ HYL+ IGD W+AVGWS+D+LP KR SN+ VVP+SG S+WADLW P RL
Sbjct: 241 YSSDHYLEPLIIGDTWLAVGWSTDILPLSKRYSNLGFVVPQSGTSIWADLWVQP---RLA 297
Query: 116 TKQIGGRVRGPFPLIHQWIEFC----------LQTARALPFNTRVK---LPEELLKG--- 159
G + QWI FC L T P +K LP++LL
Sbjct: 298 ESNFGE--------LSQWINFCWRPLAANQISLFTNAISPVTNTMKPTELPQDLLHNSIF 349
Query: 160 KPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
+ SL + A EF+ PLS Y+
Sbjct: 350 QASLKS-----------FALSEFITPLSSQANQQYQ 374
>gi|16331125|ref|NP_441853.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|383322868|ref|YP_005383721.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|383326037|ref|YP_005386890.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|383491921|ref|YP_005409597.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|384437189|ref|YP_005651913.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|451815282|ref|YP_007451734.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|1653619|dbj|BAA18531.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|339274221|dbj|BAK50708.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|359272187|dbj|BAL29706.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|359275357|dbj|BAL32875.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|359278527|dbj|BAL36044.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|407961501|dbj|BAM54741.1| spermidine/putrescine-binding periplasmicprotein [Bacillus subtilis
BEST7613]
gi|451781251|gb|AGF52220.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
Length = 384
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 107/204 (52%), Gaps = 28/204 (13%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-TQAAAGRI----------AVQQNLALLGNQVRLF 56
DW DLW PEL RI++V+ PRE IG T G A+ L L QV+ +
Sbjct: 188 DWSDLWRPELKQRIALVDDPREAIGLTLKKLGYSYNVTNPKAVNALPSALQELATQVKFY 247
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ +YL+ DVW+AVGWS+ ++P ++ S + V+P SG SLWADLW +PA +E
Sbjct: 248 NSKYYLQALLNKDVWLAVGWSNQIIPLLRNQSELRAVIPSSGTSLWADLWTMPA--EMEA 305
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTA---RALPFNTRVKLPEELLKGKPSLDTKLIAGVPP 173
+I ++W+ F Q + + F+ + +P + L+ L+A P
Sbjct: 306 AEI----------TYEWLNFSAQPSSLEQMATFSNALAVPYQNLEVSALSTNPLLAFSP- 354
Query: 174 AEILARCEFLEPLSEATLSDYEWL 197
E+L RCEFL PL AT++ Y+ L
Sbjct: 355 -ELLERCEFLAPLDIATVNQYKQL 377
>gi|440681216|ref|YP_007156011.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
gi|428678335|gb|AFZ57101.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
Length = 383
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 102/212 (48%), Gaps = 30/212 (14%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
KDW DLW EL IS++N PRE+IG T+ +++ L L QV+
Sbjct: 183 KDWSDLWRSELRSHISLLNHPREIIGLVLKKLGQSYNTENLDQIPSLEAELKALNQQVKF 242
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+D T YL+ GD W+AVGWS+DV+P + R + V+P+SG ++WADLW PA
Sbjct: 243 YDSTTYLEPLITGDTWLAVGWSNDVIPLLSRYPKLTAVIPQSGTAIWADLWVSPAG---- 298
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTK-----LIAG 170
+ R L QWI+FC Q A K + K + D + L+
Sbjct: 299 ---VDKRA-----LASQWIDFCWQPNIAKKIAVLTKTNSPIAKNIVAADIQKQLENLLLT 350
Query: 171 VPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P E+ + EFL PLS A YE L ++
Sbjct: 351 NP--EVFDKSEFLLPLSPAATKQYESLFIKMK 380
>gi|428204536|ref|YP_007083125.1| spermidine/putrescine-binding periplasmic protein [Pleurocapsa sp.
PCC 7327]
gi|427981968|gb|AFY79568.1| spermidine/putrescine-binding periplasmic protein [Pleurocapsa sp.
PCC 7327]
Length = 399
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 102/205 (49%), Gaps = 26/205 (12%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLF 56
DW DLW EL RIS+++ PREVIG +Q ++ L L QV+ +
Sbjct: 183 DWGDLWREELRDRISLLDQPREVIGLTLKKLKHSYNSQDLNKIPNLKSELLSLHRQVKFY 242
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
YL+ +GD W+AVGWSSD+L +R + V+P+SG SLWAD+W PA+ + +
Sbjct: 243 SSDRYLQPLILGDTWLAVGWSSDILALTERYRTIKAVIPRSGTSLWADIWVQPASVQETS 302
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQT--ARALPFNTRVKLPEELLKGKPSLDTKLIAGVP-- 172
+ L+ QWI+FC QT A + T P +L K +K I P
Sbjct: 303 DRTS--------LLKQWIDFCWQTQSANQISLFTNAASP-IVLNLKADELSKDIRKNPLL 353
Query: 173 --PAEILARCEFLEPLSEATLSDYE 195
+IL +CEFL PL +YE
Sbjct: 354 LIEPQILDKCEFLYPLPAQVQKEYE 378
>gi|428211975|ref|YP_007085119.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
gi|428000356|gb|AFY81199.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
Length = 417
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 104/208 (50%), Gaps = 25/208 (12%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRI----------AVQQNLALLGNQVRL 55
+DW DLW PEL R+S+++SPREVIG T G +Q+ L L Q RL
Sbjct: 207 QDWSDLWRPELRDRLSLLDSPREVIGLTLKTLGHSYNRDRLDDLPELQEQLLALHRQARL 266
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ YL+ +GD W+AVGWS+D+L ++R + VVP SG +LW++LW PA
Sbjct: 267 YSSDAYLQPLLLGDTWVAVGWSTDILATMQRNPQIRAVVPPSGTALWSELWVRPAGPNPV 326
Query: 116 TKQIGGRVRGPFP---LIHQWIEFCLQTARALPFN--TRVKLPEELLKGKPSLDTKLIAG 170
+ P P L +QWI FC A+ + ++ P L + + L L
Sbjct: 327 NPET------PTPASSLANQWINFCWNPEMAVQLSQLSKAASPMLLNRDRGELPNALQTN 380
Query: 171 ---VPPAEILARCEFLEPLSEATLSDYE 195
+P AE +A EF+EPL+ YE
Sbjct: 381 GILLPTAEAIANSEFIEPLTPEIAETYE 408
>gi|428207943|ref|YP_007092296.1| extracellular solute-binding protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428009864|gb|AFY88427.1| extracellular solute-binding protein family 1 [Chroococcidiopsis
thermalis PCC 7203]
Length = 398
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 103/203 (50%), Gaps = 25/203 (12%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQN----------LALLGNQVRL 55
+DW DLW EL RIS+ N PREVIG T G+ +N L L QV+L
Sbjct: 187 QDWGDLWREELRDRISLPNHPREVIGLTLKYLGKSYNTENPSQVPDLTVQLNRLQPQVKL 246
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ YL+ +GD W+AVGWS+D++P ++R +A ++P+SG SLWADLWA P + +
Sbjct: 247 YSSDTYLQPLILGDTWLAVGWSNDIIPVMQRHRQIAAIIPQSGTSLWADLWANPIQANSD 306
Query: 116 TKQIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLKGKPSLDTKLIA-GVP 172
L +QWI+FC Q AR + R P ++ +L VP
Sbjct: 307 RA-----------LEYQWIDFCWQPQIARQILLFGRTNSPIPFQIDPENIQAELRPLLVP 355
Query: 173 PAEILARCEFLEPLSEATLSDYE 195
IL + EFL PL+ + ++
Sbjct: 356 NDNILDKSEFLRPLTPDAIQQHQ 378
>gi|67921536|ref|ZP_00515054.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii
WH 8501]
gi|416384741|ref|ZP_11684684.1| periplasmic polyamine-binding protein of ABC transporter
[Crocosphaera watsonii WH 0003]
gi|67856648|gb|EAM51889.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii
WH 8501]
gi|357264996|gb|EHJ13812.1| periplasmic polyamine-binding protein of ABC transporter
[Crocosphaera watsonii WH 0003]
Length = 387
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNLAL----------LGNQVRL 55
+DW DLW L+ RISMVN PRE+IG T G+ +NL L +V+
Sbjct: 182 QDWSDLWDERLSDRISMVNQPREIIGLTLKQLGKSYNTENLEEVPELKSELLNLNKRVKY 241
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ HYL+ +GDVW++VGWS++++P + + N+ VVP SG ++W+D+W P A E
Sbjct: 242 YSDQHYLQPLVVGDVWVSVGWSNEIIPLMAKSPNIKAVVPTSGTAIWSDIWVKPKAKETE 301
Query: 116 TKQIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLKGKPSLDTKLIAG--- 170
T+ + QW+ FC Q AR + P K L+ +
Sbjct: 302 TEL--------SEIAKQWLNFCWQPQAARLMSLFADAASPVINTIDKDELEPDITNNPLL 353
Query: 171 VPPAEILARCEFLEPLSEATLSDY 194
+ I +C+FLEPLS+ + Y
Sbjct: 354 FIDSAIFDKCDFLEPLSKQSKEQY 377
>gi|428304513|ref|YP_007141338.1| extracellular solute-binding protein [Crinalium epipsammum PCC
9333]
gi|428246048|gb|AFZ11828.1| extracellular solute-binding protein family 1 [Crinalium epipsammum
PCC 9333]
Length = 391
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNLALLGN----------QVRLF 56
+W DLW E GRIS+++ PRE+IG T G NL + N V+L+
Sbjct: 182 NWSDLWREECKGRISLLDQPREIIGLTLKHLGYSYNTTNLDEIKNLKDALKKLHQNVKLY 241
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
YL+ +GD W+AVGWS+DVL A+K +A VVP+SG +LWAD+W P + +
Sbjct: 242 SSDTYLQPLILGDTWLAVGWSTDVLKAIKSEPKIAAVVPQSGTALWADVWVRPKLASANS 301
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQ--TARALPFNTRVKLPEELLKGKPSLDTKLIAG---V 171
++ L QWI+FC Q +A A+ T P + + L+ +
Sbjct: 302 TSDTPNLQT---LADQWIDFCWQPKSASAISIFTEAVSPVLINMDGNDIPKDLVKNQLLL 358
Query: 172 PPAEILARCEFLEPLSEATLSDY 194
P +I+ + EFL PLS+AT Y
Sbjct: 359 PNKQIIQKSEFLHPLSKATEQQY 381
>gi|218248017|ref|YP_002373388.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 8801]
gi|218168495|gb|ACK67232.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 8801]
Length = 391
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 101/211 (47%), Gaps = 38/211 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
KDW DLW EL RI++V+ PREVIG T + ++ L L QV+
Sbjct: 185 KDWSDLWREELRDRIALVDQPREVIGLTLKKLGYSYNTTDLSQVSSLTSELLALHKQVKY 244
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ HYL+ +GD W++VGWSSD++P V N+ VVP SG +LW+D+W P + E
Sbjct: 245 YSSDHYLQPLVVGDAWLSVGWSSDIIPLVNSNRNIKAVVPASGTALWSDVWVNPKVKQGE 304
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQ----------TARALPFNTRVK-LPEELLKGKPSLD 164
TK L QW++FC Q T P + K LP E +K P L
Sbjct: 305 TKL--------SELTKQWLDFCWQDQAVNQICLLTDGVSPMIYQAKELPSE-VKDNPLL- 354
Query: 165 TKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
I+ +C+F+EPL +YE
Sbjct: 355 ------FIDQRIMDKCDFIEPLPLKVKQEYE 379
>gi|254413480|ref|ZP_05027250.1| hypothetical protein MC7420_6059 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196179587|gb|EDX74581.1| hypothetical protein MC7420_6059 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 397
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNLALLGN----------QVRLF 56
DW DLW PEL RIS+++SPREVIG T G NL+ + N QV+L+
Sbjct: 184 DWSDLWRPELRDRISLLDSPREVIGLTLKKLGFSYDTANLSQVPNLKTELLDLHKQVKLY 243
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
HYL+ +GD W+AVGWS+D+L R + V+P+SG SLWAD+W PA + T
Sbjct: 244 SSDHYLEPLVLGDTWLAVGWSTDILSLRGRDRQIQAVIPRSGTSLWADVWVQPAVQK--T 301
Query: 117 KQIGGRVRGPFPLIHQWIEFC--LQTARALPFNTRVKLPEELLKGKPSLDTKLIAG---V 171
L QWI+FC Q+A + + P + +L L +
Sbjct: 302 AAESPEPETSQSLTQQWIDFCWRQQSAIDISLLSHAASPILVTMNPATLPDSLRQSEILL 361
Query: 172 PPAEILARCEFLEPLSEATLSDY 194
P IL EFL PL + + Y
Sbjct: 362 PEPSILEDSEFLYPLPQEAIEQY 384
>gi|257060659|ref|YP_003138547.1| hypothetical protein Cyan8802_2862 [Cyanothece sp. PCC 8802]
gi|256590825|gb|ACV01712.1| conserved hypothetical protein [Cyanothece sp. PCC 8802]
Length = 391
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 101/211 (47%), Gaps = 38/211 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
KDW DLW EL RI++V+ PREVIG T + ++ L L QV+
Sbjct: 185 KDWSDLWREELRDRIALVDQPREVIGLTLKKLGYSYNTTDLSQVSSLTSELLALHKQVKY 244
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ HYL+ +GD W++VGWSSD++P V N+ VVP SG +LW+D+W P + +
Sbjct: 245 YSSDHYLQPLVVGDAWLSVGWSSDIIPLVNSNRNIKAVVPASGTALWSDVWVNPKVKQGD 304
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQ----------TARALPFNTRVK-LPEELLKGKPSLD 164
TK L QW++FC Q T P + K LP E +K P L
Sbjct: 305 TKL--------SELTKQWLDFCWQDQAVNQICLLTDGVSPMIYQAKELPSE-VKDNPLL- 354
Query: 165 TKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
I+ +C+F+EPL +YE
Sbjct: 355 ------FIDQRIMDKCDFIEPLPLKVKQEYE 379
>gi|218438983|ref|YP_002377312.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 7424]
gi|218171711|gb|ACK70444.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 7424]
Length = 384
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 33/207 (15%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNLALLGN----------QVRLF 56
DW DLW EL GRIS++N PREVIG T G QN++L+ N Q +++
Sbjct: 181 DWSDLWREELQGRISLLNQPREVIGLTLKKLGYSYNTQNISLIPNLKSELFALNKQTKIY 240
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS-RLE 115
+YL+ +GD+W+AVGWS++++P + R ++ +VP+SG +LWAD+W P + +L
Sbjct: 241 SSNYYLQPLILGDIWLAVGWSNEIIPLLSRRRDLKAIVPQSGTALWADVWVKPTSDVKLS 300
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQ--TARALPFNTRVKLPEELLKG-----KPSLDTKLI 168
L +WI FC Q + + T P L + KP L+ L+
Sbjct: 301 N------------LAQEWINFCWQPTAVQQISLYTDAVSPLILDQNSEKLPKPILNNPLL 348
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYE 195
P IL + EF++PL ++ + YE
Sbjct: 349 FIEP--TILNKSEFIKPLPPSSQAQYE 373
>gi|334121096|ref|ZP_08495171.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
gi|333455585|gb|EGK84231.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
Length = 369
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 28/203 (13%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLF 56
DWKDLW EL RIS+ +S REVIG TQ V++ L L QV+L+
Sbjct: 166 DWKDLWRSELRDRISLPDSAREVIGLTLKKLGKSYNTQQLDQVPNVKKELENLHQQVKLY 225
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
YL+ +GD W+AVG S D+LP ++ ++A+V+P SG +LW DLW PA+
Sbjct: 226 SSDAYLQPLILGDTWLAVGSSGDLLPLLQTQKDIALVIPVSGTALWTDLWVEPASG---- 281
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKG-KPSLDTKLIAG----V 171
P L+ +WI+FCLQ A + K ++ G KP + + +
Sbjct: 282 --------NPVSLVEEWIDFCLQPRVAPQLSLLAKASSPIIIGMKPEDLPEAVRTNSVLL 333
Query: 172 PPAEILARCEFLEPLSEATLSDY 194
P A+ILA +FL P +A ++ Y
Sbjct: 334 PDAKILAASDFLLPFGDAGIAQY 356
>gi|119490051|ref|ZP_01622675.1| periplasmic polyamine-binding protein of ABC transporter [Lyngbya
sp. PCC 8106]
gi|119454203|gb|EAW35355.1| periplasmic polyamine-binding protein of ABC transporter [Lyngbya
sp. PCC 8106]
Length = 357
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 102/212 (48%), Gaps = 39/212 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG----TQAAAGRIA-------VQQNLALLGNQVRL 55
+DW DLW ++ +IS++N+PRE IG ++ I ++ L ++L
Sbjct: 149 QDWGDLWREDIRNQISVLNNPRETIGLILKKLGSSYNITDLDLVVDLEDEFRQLHRNIKL 208
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+D YLK GD W+AVGWS+D R N+ VV+P SG +LWAD+W P + +
Sbjct: 209 YDSNTYLKPLITGDTWLAVGWSTDFSEKFCRQHNIGVVIPTSGTALWADVWVQPTSEKPI 268
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQ----------TARALPFNTRVKLPE--ELLKGKPSL 163
+ PL QWI+FC + T P +++ E E L+ P L
Sbjct: 269 SN---------LPLAQQWIDFCWKPEIATQMSILTGTTSPIVNQLQPSELPETLQNNPLL 319
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
P AEIL + EFL PL E+TL Y+
Sbjct: 320 -------FPKAEILEQSEFLLPLPESTLKQYQ 344
>gi|427731993|ref|YP_007078230.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
gi|427367912|gb|AFY50633.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
Length = 382
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 42/227 (18%)
Query: 2 NENGFKD-------WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQ 43
N++ FKD W DLW E+ R S+++ PREVIG T+ ++
Sbjct: 171 NQDKFKDLGWMPQDWSDLWREEMRSRFSLLDHPREVIGLVLKKLGKSYNTENLDAVPQLE 230
Query: 44 QNLALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
Q L L Q + + YL+ IGD W+AVGWS+DV+P + R + +++P+SG ++WA
Sbjct: 231 QELRTLNQQAKFYSSNTYLQPLIIGDTWLAVGWSNDVVPILSRYPQMKMIIPRSGTAIWA 290
Query: 104 DLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ--TARALPFNTRVKLP------EE 155
DLW P + + L QWI+FC Q A+ + T+ P ++
Sbjct: 291 DLWVSPKGANQDDN-----------LSSQWIDFCWQPNIAKQIVVRTKSNSPIPTNIADD 339
Query: 156 LLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
++G S + L+ E+ + EFL PL T YE L N++
Sbjct: 340 DIQG--SFASLLLNN---QEVFDKSEFLLPLQLTTAKQYESLFNNIK 381
>gi|428317919|ref|YP_007115801.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
gi|428241599|gb|AFZ07385.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
Length = 369
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 104/203 (51%), Gaps = 28/203 (13%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLF 56
DWKDLW EL RIS+ +S REVIG TQ +++ LA L QV+ +
Sbjct: 166 DWKDLWRSELRDRISLPDSAREVIGLTLKKLGKSYNTQQLDRVPNLKKELANLHRQVKFY 225
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
YL+ +GD W+AVG S D+LP ++ ++A+V+P SG +LW DLW PA+
Sbjct: 226 SSDAYLQPLILGDTWLAVGSSGDLLPLLQTQKDIALVIPVSGTALWTDLWVEPASG---- 281
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKG-KPSLDTKLIAG----V 171
P L+ +WI+FCLQ A + K ++ G KP + + +
Sbjct: 282 --------NPVSLVDKWIDFCLQPRIAPQLSLLAKASSPIIVGMKPEDLPEAVRTNSVLL 333
Query: 172 PPAEILARCEFLEPLSEATLSDY 194
P A+ILA +FL P +A ++ Y
Sbjct: 334 PDAKILAASDFLLPFGDAGIAQY 356
>gi|300869610|ref|ZP_07114190.1| Periplasmic polyamine-binding protein of ABC transporter
[Oscillatoria sp. PCC 6506]
gi|300332388|emb|CBN59390.1| Periplasmic polyamine-binding protein of ABC transporter
[Oscillatoria sp. PCC 6506]
Length = 349
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 26/203 (12%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLF 56
DW DLW EL RIS++++PREVIG T+ +++ L+ L Q +L+
Sbjct: 144 DWSDLWREELRDRISLLDNPREVIGLTLKKLGKSYNTRDLNKVANLKEELSNLHRQTKLY 203
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
YL+ +GD W AVGWS DVL ++ + VVP SG S+W DLW P +++
Sbjct: 204 SSNSYLQPLVLGDTWAAVGWSGDVLRLMQNQKEIGAVVPISGTSMWVDLWVQPVSNQ--- 260
Query: 117 KQIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLKGKPSLDTKLIAG---V 171
L+ QWI+FC Q A + T+ P + + L +L +
Sbjct: 261 -------SSNLSLVEQWIDFCWQPQIATQMSLLTQASSPVIISMKREDLPEQLRINRLLL 313
Query: 172 PPAEILARCEFLEPLSEATLSDY 194
P +E++++ EFL PL + + Y
Sbjct: 314 PESEVISKSEFLFPLPDVAIEQY 336
>gi|186683650|ref|YP_001866846.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
gi|186466102|gb|ACC81903.1| extracellular solute-binding protein, family 1 [Nostoc punctiforme
PCC 73102]
Length = 385
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 101/217 (46%), Gaps = 40/217 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
KDW DLW + RIS++N PREVIG T+ +++ L L QV+
Sbjct: 187 KDWSDLWRDGMQQRISLLNQPREVIGLVLKKLGKSYNTENLDQVPNLEKELQTLNQQVKF 246
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ +YL+ +GD W+AVGWSSDVL + R + V+P+SG ++WADLW PA
Sbjct: 247 YSSNNYLEPLIMGDTWLAVGWSSDVLQVLGRYPQLGAVIPQSGTAMWADLWVRPAGINKG 306
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG----- 170
T L QWI+FC Q + A + L K + T + A
Sbjct: 307 T------------LSDQWIDFCWQPSIAKQISV-------LTKSNSPISTNIAASDIQEP 347
Query: 171 -----VPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
E+L + EFL PL + + YE L A ++
Sbjct: 348 VRSLLQSDREVLDKSEFLLPLPPSAIKQYESLFAKMK 384
>gi|284929800|ref|YP_003422322.1| spermidine/putrescine-binding periplasmic protein [cyanobacterium
UCYN-A]
gi|284810244|gb|ADB95941.1| spermidine/putrescine-binding periplasmic protein [cyanobacterium
UCYN-A]
Length = 385
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 45/214 (21%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
KDW DLW P+L RIS+V+ PREVIG T+ ++ L QV+
Sbjct: 180 KDWSDLWDPKLENRISLVDQPREVIGLTLKKLNKSYNTKNLKNIPQLRSELQAFNKQVKY 239
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
++ +YL+ +G+VW +VGWS+D++P + R N+ V+P SG SLW+D+W P + +
Sbjct: 240 YNSQYYLQPLLMGEVWASVGWSNDIIPILSRNRNIKAVIPSSGTSLWSDIWVAPKNNNIS 299
Query: 116 T-KQIGGRVRGPFPLIHQWIEFC----------LQTARALP----FNTRVKLPEELLKGK 160
T +I R WI FC L T + P N + PE
Sbjct: 300 TLSEIAQR----------WINFCWEPEMVNLISLFTNASSPMINNLNNKQLFPE------ 343
Query: 161 PSLDTKLIAGVPPAEILARCEFLEPLSEATLSDY 194
++ L+ P I +C+F+EPLS +Y
Sbjct: 344 -VINNPLLCLQP--SIFNKCDFIEPLSIEEQKEY 374
>gi|443323260|ref|ZP_21052268.1| spermidine/putrescine-binding periplasmic protein [Gloeocapsa sp.
PCC 73106]
gi|442786998|gb|ELR96723.1| spermidine/putrescine-binding periplasmic protein [Gloeocapsa sp.
PCC 73106]
Length = 374
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 98/201 (48%), Gaps = 21/201 (10%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNLAL----------LGNQVRL 55
+DW DLW L RIS+ REVIG T G Q NLA L QV+
Sbjct: 159 QDWSDLWQSALKERISLPAHSREVIGLTLKKLGYSYNQTNLAAIPELPKELERLNQQVKF 218
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ YL+ GD W+AVGWS+D++P SN+ V+P SG SLW DLW A ++
Sbjct: 219 YSSDAYLQPLIKGDTWLAVGWSTDIIPVANNYSNIEAVIPPSGTSLWVDLWVKSALTQPT 278
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQ--TARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP 173
++ LI WI+FC Q +A A+ T P L TK +P
Sbjct: 279 APEV--------ELIKGWIDFCWQPRSAEAISLLTNAASPVILNAPVSGELTKKPLVIPS 330
Query: 174 AEILARCEFLEPLSEATLSDY 194
EIL++ EFL PL+ TL+++
Sbjct: 331 PEILSKSEFLLPLNMETLAEH 351
>gi|443313248|ref|ZP_21042860.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 7509]
gi|442776653|gb|ELR86934.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 7509]
Length = 383
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 31/205 (15%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNL----------ALLGNQVRLF 56
+W DLW EL RIS+ N PREVIG T G QNL L QV+ +
Sbjct: 185 NWSDLWREELRSRISLPNQPREVIGLTLKKLGYSYNSQNLQQVSQLADQLKTLHQQVKFY 244
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
Y++ +GD W+AVGWSSDV+P ++R +A +VP+SG+++WAD+W P S +
Sbjct: 245 SSDRYMEPLILGDTWLAVGWSSDVIPVIQRYQEIAAIVPQSGSAIWADVWVSPTKSPVNK 304
Query: 117 KQIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEEL----LKGKPSLDTKLIAG 170
L QWI+FC Q+ + + ++ P E+ + L L+
Sbjct: 305 L-----------LAKQWIDFCWLPQSQKQISILSKALSPIEIDINPTDVQEGLRNLLLVK 353
Query: 171 VPPAEILARCEFLEPLSEATLSDYE 195
+E A+ EFL PL + T+ Y+
Sbjct: 354 ---SETFAQSEFLLPLPKETMQQYK 375
>gi|384250495|gb|EIE23974.1| periplasmic binding protein-like II, partial [Coccomyxa
subellipsoidea C-169]
Length = 310
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 86/155 (55%), Gaps = 22/155 (14%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGT---------QAAAGRIA--------VQQNLAL 48
+DW DL P L R++ V+SPRE +G A +A + Q +
Sbjct: 148 IRDWGDLLQPCLRQRVAWVDSPREFVGAALKTLGGGFNTGAAELASLGLSDQDLAQQVDR 207
Query: 49 LGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 108
L QVR+F ++K G DVW VGWS D++PA +R +V +V P SG SLWAD+WA+
Sbjct: 208 LRQQVRVFSSKEHIKALGAKDVWAVVGWSGDLVPAAERSGDVVLVAPASGTSLWADMWAV 267
Query: 109 PAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARA 143
P+ + Q G R+RGP PL+ W+++ LQ +RA
Sbjct: 268 PSHA-----QHGSRMRGPSPLLPAWLDYWLQPSRA 297
>gi|170076941|ref|YP_001733579.1| periplasmic binding protein of ABC transporter [Synechococcus sp.
PCC 7002]
gi|169884610|gb|ACA98323.1| periplasmic binding protein of ABC transporter [Synechococcus sp.
PCC 7002]
Length = 377
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 22/145 (15%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG----------TQAAAGRIA-VQQNLALLGNQVRLF 56
DW DLW PEL G+IS++N REV+G + IA ++ + L QV+ +
Sbjct: 178 DWADLWRPELQGKISLLNQSREVLGLLLKKQGKSYNETDPEAIANLESDFQTLHRQVKFY 237
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
THYL+ +GD WIA GWS D+LP ++R N+ V+P SG +LW DLW P
Sbjct: 238 SSTHYLQPLNMGDTWIAQGWSQDILPLLQRYRNLGAVIPASGTALWCDLWVQPQ------ 291
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTA 141
R + F + W++FC + A
Sbjct: 292 -----RSQTSFETLKTWLDFCWEPA 311
>gi|428220899|ref|YP_007105069.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 7502]
gi|427994239|gb|AFY72934.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 7502]
Length = 357
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG----------TQAAAGRIA-VQQNLALLGNQVRLFD 57
W DLW EL G+I++ N PREVIG A IA + L L QV +
Sbjct: 158 WADLWRTELKGKITLPNDPREVIGLTLKKLGYSYNTANIKAIAPLTPALQALNQQVLTYT 217
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
YL+ IGD W+AVGWS D++ ++ S++ VV+P G +LW+DLW P
Sbjct: 218 SDSYLQPLLIGDSWLAVGWSQDIVNTAEQNSDIKVVIPAEGTALWSDLWVFPQRVNRPEN 277
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARALPFN--TRVKLPEELLKGKPSLDTKLIAGVPPAE 175
QI G W++ CL A A T L P T I PP +
Sbjct: 278 QIFG---------QDWLDLCLTPAIANQITALTDATATNPDLGKLPKSVTSNILKFPPDQ 328
Query: 176 ILARCEFLEPLSEATLSDYEWLVANLQK 203
ILA+ E + PLSE + +Y+ L NL++
Sbjct: 329 ILAKSELILPLSETSNQEYKQLWENLRQ 356
>gi|298492009|ref|YP_003722186.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
0708]
gi|298233927|gb|ADI65063.1| extracellular solute-binding protein family 1 ['Nostoc azollae'
0708]
Length = 383
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 100/212 (47%), Gaps = 31/212 (14%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
KDW DLW EL RIS++N PREVIG T+ ++ L L QV+
Sbjct: 183 KDWSDLWRSELRSRISLLNHPREVIGLVLKKLGESYNTENITQIPDLKAELLALHQQVKF 242
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+D T YL+ GD W+AVGWS+DV+P + R + V+P+SG ++WADLW PA
Sbjct: 243 YDSTTYLEPLLTGDTWLAVGWSNDVMPILSRYPKLTAVIPQSGTAMWADLWVSPAEVEQN 302
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQ--TARALPFNTRVKLPEELLKG---KPSLDTKLIAG 170
T L WI FC Q A+ + T+ P + + L L+
Sbjct: 303 T------------LASDWINFCWQPNIAKQIAILTKNNSPITNIVASDLQKPLQNLLLNN 350
Query: 171 VPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
E+ + EFL PL + Y++L ++
Sbjct: 351 ---QELFDKSEFLLPLPASVNKGYKYLFNKIK 379
>gi|428775058|ref|YP_007166845.1| periplasmic polyamine-binding protein [Halothece sp. PCC 7418]
gi|428689337|gb|AFZ42631.1| periplasmic polyamine-binding protein [Halothece sp. PCC 7418]
Length = 372
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 104/222 (46%), Gaps = 46/222 (20%)
Query: 3 ENGFK---DWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLAL 48
E G++ DWKDLW EL R+S++N PREVIG T ++ LA
Sbjct: 160 EAGYEPITDWKDLWREELRDRVSLLNQPREVIGFTLKKLGQSYNTSDLEQVPNLKTELAT 219
Query: 49 LGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 108
L QV+ + YL+ + D W+AVGWSSD+L R ++ V+P+SG SLWAD+W
Sbjct: 220 LHQQVKFYSSQAYLQPLVLEDTWVAVGWSSDILQLQTRYPDLTTVIPESGTSLWADVWVQ 279
Query: 109 PAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARA------------LPFNTRV-KLPEE 155
P ++ + QWI FC + A + NT+ +LPE
Sbjct: 280 PTGKPSLSE-----------AMLQWINFCWEEQAATQIGLFTNASSPILLNTKTDQLPES 328
Query: 156 LLKGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
L + + +PP ++ + EFL PLS T Y+ L
Sbjct: 329 LQQDQ--------LRIPPQTLIEKSEFLLPLSAQTKKQYQQL 362
>gi|172036028|ref|YP_001802529.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51142]
gi|354552834|ref|ZP_08972141.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51472]
gi|171697482|gb|ACB50463.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51142]
gi|353554664|gb|EHC24053.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51472]
Length = 390
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 26/205 (12%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
+DW DLW L+ RIS+V+ REV+G T+ ++ L L QV+
Sbjct: 182 QDWSDLWDQRLSDRISVVDQYREVMGLTLKKLGQSYNTEKLDQVPQLKTELLALNQQVKY 241
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ HYL+ +GDVW++VGWS++++P V + N+ VVP SG S+W+D+W P A +
Sbjct: 242 YSSDHYLQPLVVGDVWVSVGWSNEIIPLVTKNRNIKAVVPTSGTSIWSDVWVKPKAKESQ 301
Query: 116 TKQIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLKGKPSLDTKLIAG--- 170
K QW+ FC Q A+ + P K L +++I
Sbjct: 302 NKLSET--------AKQWLNFCWQPQAAKLISLFADAASPMIDRIDKKELSSEVINNPLL 353
Query: 171 -VPPAEILARCEFLEPLSEATLSDY 194
+ PA I +CEFL+PLS+ Y
Sbjct: 354 FIDPA-IFEQCEFLQPLSKQVEEQY 377
>gi|307153205|ref|YP_003888589.1| extracellular solute-binding protein [Cyanothece sp. PCC 7822]
gi|306983433|gb|ADN15314.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC
7822]
Length = 383
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 29/206 (14%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRI----------AVQQNLALLGNQVRL 55
KDW DLW ++ RIS+++ PREVIG T G ++ +L L Q +
Sbjct: 178 KDWGDLWREDVRNRISLLDQPREVIGLTLKKLGYSYNSDNINQIPNLKSDLVALNKQAKF 237
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ HYL+ +GD W+AVGWS +++P +K ++A VVP+SG +LWAD+W PAA
Sbjct: 238 YSSDHYLEPLILGDTWLAVGWSHEIIPLLKNYRDIAAVVPQSGTALWADIWVKPAA---- 293
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQ--TARALPFNTRVKLPEELLKGKPSLDTKLIAGVP- 172
V P + WI FC Q +A+ + T P +L+ P + I P
Sbjct: 294 -------VIKPSKFVQDWINFCWQSKSAKEISLFTDAVSP-VILELAPENLPQAIRDNPL 345
Query: 173 ---PAEILARCEFLEPLSEATLSDYE 195
IL + +F++PL + YE
Sbjct: 346 LLIDKNILEKSDFIKPLPASVEKQYE 371
>gi|220909337|ref|YP_002484648.1| ABC transporter periplasmic solute-binding protein [Cyanothece sp.
PCC 7425]
gi|219865948|gb|ACL46287.1| ABC transporter, periplasmic solute-binding protein [Cyanothece sp.
PCC 7425]
Length = 377
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 28/213 (13%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLF 56
DW+DLW L R+S+++ PREVIG T A A +++ LA L Q +
Sbjct: 175 DWQDLWRSPLRHRLSLLDHPREVIGLTLKKLGYSYNTNAPAKIADLERELAQLNRQALFY 234
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
YL+ +GD W AVGWS+DVLP ++R + V+VP+SG +LWAD+W PA
Sbjct: 235 SSDTYLQPLVLGDTWAAVGWSTDVLPLMRRNDKIGVIVPRSGTALWADVWVRPA------ 288
Query: 117 KQIGGRVRGPFP---LIHQWIEFCLQTARALPFNTRVKLPEELLKG-KPSLDTKLIAGVP 172
+ P P L + W+++ Q A A + LL +P+ K + +P
Sbjct: 289 ------LEIPPPAVALQNSWMDYWWQPAIANALSQFSDALSPLLTDLQPNGPAKKLL-LP 341
Query: 173 PAEILARCEFLEPLSEATLSDYEWLVANLQKPA 205
+ R EFL PLS+ + +Y+ L +++P+
Sbjct: 342 DQPLFERSEFLLPLSKTAIEEYDTLWTQMRQPS 374
>gi|427717210|ref|YP_007065204.1| extracellular solute-binding protein [Calothrix sp. PCC 7507]
gi|427349646|gb|AFY32370.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
7507]
Length = 376
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 99/216 (45%), Gaps = 40/216 (18%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNLAL----------LGNQVRLF 56
DW DLW E+ RIS++N PREVIG T G+ +NL L QV+ +
Sbjct: 179 DWGDLWREEVRSRISLLNQPREVIGLTLKKLGKSYNTENLDQVPDLEKELRRLNQQVKFY 238
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
T YL+ D W+AV WS DV+P + R +A ++P+SG ++W DLW PA+ +T
Sbjct: 239 ASTTYLEPLITEDTWLAVAWSDDVMPVLARYPQLAAIIPQSGTAVWVDLWVRPASVSKDT 298
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG------ 170
L QWI+FC Q A K L K + T ++A
Sbjct: 299 ------------LSDQWIDFCWQPNIA-------KQISLLTKSNSPISTNIVASEIQEKL 339
Query: 171 ----VPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
+ E+ + EFL PL+ YE L A ++
Sbjct: 340 RNLLLSNREVFDKSEFLLPLNSTASKQYESLFAKIK 375
>gi|428778824|ref|YP_007170610.1| spermidine/putrescine-binding periplasmic protein [Dactylococcopsis
salina PCC 8305]
gi|428693103|gb|AFZ49253.1| spermidine/putrescine-binding periplasmic protein [Dactylococcopsis
salina PCC 8305]
Length = 369
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 43/212 (20%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLF 56
DW DLW EL RIS++N PREVIG T ++ L L QV+ +
Sbjct: 168 DWGDLWREELRDRISLLNQPREVIGLTLKKLGFSYNTPDLDSISDLKTALKTLNQQVKFY 227
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
YL+ + D W+AVGWS+D+L R ++ ++P+SG +LWADLW P + +
Sbjct: 228 SSQSYLQPLILEDTWVAVGWSNDLLQLRTRYPDIKTIIPRSGTALWADLWVNPTGNEAIS 287
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQ----------TARALPF---NTRVKLPEELLKGKPSL 163
+ I QWI+FCL T + P R K+P+ L + K
Sbjct: 288 EA-----------ILQWIDFCLNPKAANQIGIFTNASSPIFINANRDKIPKSLGEDK--- 333
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
P +E+L + EFL PLS T Y+
Sbjct: 334 -----IKNPSSEVLEKSEFLLPLSPKTEEQYQ 360
>gi|427724862|ref|YP_007072139.1| extracellular solute-binding protein [Leptolyngbya sp. PCC 7376]
gi|427356582|gb|AFY39305.1| extracellular solute-binding protein family 1 [Leptolyngbya sp. PCC
7376]
Length = 374
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 96/214 (44%), Gaps = 33/214 (15%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIGT--------------QAAAGRIAVQQNLALLGNQV 53
DW+DLW EL +IS+++ REVIG +A AG + + L LL V
Sbjct: 175 DWEDLWREELKNKISLLDHSREVIGFVLKNFGFSYNDKDPEAIAG---LSEELGLLHRNV 231
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + THYL+ GD W+A WS D L +KR N+ VVPKSG +LW DLW P S
Sbjct: 232 KFYSSTHYLQPLITGDTWVAQAWSQDALSLMKRYRNLGAVVPKSGTALWCDLWVQPKKSE 291
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG--- 170
E F + W+EFC F L+ +LD K+
Sbjct: 292 RE-----------FADLKPWLEFCANERAINQFAQSTFAASPLIYQTENLDAKVTENPLI 340
Query: 171 -VPPAEILARCEFLEPLSEATLSDYEWLVANLQK 203
V P E E +E L +T + Y+ L +++
Sbjct: 341 FVNP-ETYQNSEIIETLPPSTEAQYQTLWQQMRQ 373
>gi|359457473|ref|ZP_09246036.1| ABC transporter periplasmic solute-binding protein [Acaryochloris
sp. CCMEE 5410]
Length = 371
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 98/206 (47%), Gaps = 38/206 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRI----------AVQQNLALLGNQVRL 55
+DW DLW EL G IS+ + PREVIG T G+ + Q L L Q
Sbjct: 177 QDWSDLWRSELKGHISLPDQPREVIGLTLKKLGQSYNLEDLDTISELPQTLKELNEQTLF 236
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ + YL+ +GD W AVGWSSD+LPA+ R ++ V+P SG++LWADLW
Sbjct: 237 YASSQYLEPLILGDTWAAVGWSSDILPALAREPDLDAVLPASGSALWADLWV-------- 288
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPPAE 175
Q+ P I+QWI + + A N K + + P L T L
Sbjct: 289 --QV-----QPSETINQWINYWWEDTVA---NNLSKFTDTI---SPLLSTTLPVKSQSHR 335
Query: 176 ILA------RCEFLEPLSEATLSDYE 195
++A R EFL PLS +TL YE
Sbjct: 336 LIAAPKQFERSEFLLPLSPSTLQQYE 361
>gi|434384916|ref|YP_007095527.1| spermidine/putrescine-binding periplasmic protein [Chamaesiphon
minutus PCC 6605]
gi|428015906|gb|AFY92000.1| spermidine/putrescine-binding periplasmic protein [Chamaesiphon
minutus PCC 6605]
Length = 403
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 106/214 (49%), Gaps = 28/214 (13%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG----------TQAAAGRI-AVQQNLALLGNQVRL 55
+DW DLW P+L RIS+++ REVIG A R+ +Q LA L QV+
Sbjct: 185 QDWADLWNPQLRQRISLLDRSREVIGLTLKKLGYSYNAADLDRVLNLQTELAKLHQQVKF 244
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ HYL+ IGD W+AVGWS D +++ + VVP+SG ++ ADLW P+ S
Sbjct: 245 YSADHYLQPLVIGDTWVAVGWSLDASELIQKNPQIGAVVPRSGTAISADLWVQPSLSPKL 304
Query: 116 TKQIGGRVRGP--FPLIHQWIEFCLQ----------TARALPFNTRVKLPEELLKGKPSL 163
+ + L ++WI+ CLQ T A P T + P ++ P +
Sbjct: 305 SPANRALLSNSNRLKLSNKWIDHCLQPQSSNQISVLTPGAAPLLTNLN-PNDI---PPDV 360
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
L+ +P E+L + EF+ P+S T + ++ L
Sbjct: 361 RKNLLT-LPSKEVLDKSEFIYPVSPTTKAQFDRL 393
>gi|126660470|ref|ZP_01731578.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. CCY0110]
gi|126618229|gb|EAZ88990.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. CCY0110]
Length = 387
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 24/204 (11%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNLA----------LLGNQVRL 55
+DW DLW L+ RISMV+ REVIG T G +NLA L QV+
Sbjct: 182 QDWSDLWDQRLSDRISMVDQYREVIGLTLKYLGHSYNTENLAQVPQLKTELLALNEQVKY 241
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ HYL+ +GDV ++VGWS++++P + + N+ VVP SG SLW+D+W P +
Sbjct: 242 YSSDHYLQPLLVGDVDVSVGWSNEIIPLITKNRNIKAVVPTSGTSLWSDIWVKPKVKEGQ 301
Query: 116 TKQIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLKGKPSLDTKLIAG--- 170
++ + QW+ FC Q A+ + P K + +++
Sbjct: 302 N-ELSETAK-------QWLNFCWQPQAAKIISLFADAASPMIDRIDKKEVSPEIMNNPLL 353
Query: 171 VPPAEILARCEFLEPLSEATLSDY 194
I +CEFLEPLS Y
Sbjct: 354 FIDETIFEQCEFLEPLSTEVQEQY 377
>gi|427706446|ref|YP_007048823.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
gi|427358951|gb|AFY41673.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
Length = 386
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
+DW DLW L IS++++PREVIG T+ +++ L L QV+
Sbjct: 187 QDWSDLWRDGLRSHISLLDNPREVIGLVLKKFGKSYNTENLDTVPNLEKELQTLNQQVKF 246
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ YL+ GD W+AVGWSSDVLP + R + V+P+SG ++WADLW P ++
Sbjct: 247 YSSNTYLEPLVTGDTWLAVGWSSDVLPLLSRYPQLNAVIPQSGTAIWADLWVRP--TKAS 304
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKL-IAGV--P 172
I + WI+FC Q A + K + + D + I +
Sbjct: 305 KNDISSK----------WIDFCWQPDIAKQITAKTKTNSPIFADIAATDIQEPIRSLLQT 354
Query: 173 PAEILARCEFLEPLSEATLSDYEWLVANLQ 202
++ ++ EFL L +T YE L ++
Sbjct: 355 NHQVFSKSEFLLALPTSTAKQYESLFTKIK 384
>gi|427711348|ref|YP_007059972.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 6312]
gi|427375477|gb|AFY59429.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 6312]
Length = 354
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 67/111 (60%), Gaps = 11/111 (9%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG----------TQAAAGRIA-VQQNLALLGNQVRL 55
+DW+DLW PEL ++S++N PREVIG A +++ ++ L L Q R
Sbjct: 158 QDWEDLWKPELTQKLSLLNQPREVIGLVLKKLGQSYNTADINQVSGLKPALEELRQQTRF 217
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 106
F T YL+ +GD WIA WS+D+LP + R SN+ +VPKSG +LWAD W
Sbjct: 218 FASTDYLQSLIMGDTWIAQAWSTDILPILNRYSNIKAIVPKSGTALWADCW 268
>gi|158338236|ref|YP_001519413.1| ABC transporter periplasmic solute-binding protein [Acaryochloris
marina MBIC11017]
gi|158308477|gb|ABW30094.1| ABC transporter, periplasmic solute-binding protein [Acaryochloris
marina MBIC11017]
Length = 371
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 92/200 (46%), Gaps = 26/200 (13%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRI----------AVQQNLALLGNQVRL 55
+DW DLW EL IS+++ PREVIG T G+ + Q L L Q
Sbjct: 177 QDWSDLWRSELKEHISLLDQPREVIGLTLKKLGQSYNLEDLDTISELPQTLKELNEQTLF 236
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+ + YL+ +GD W AVGWSSD+LP + R ++ V P SG++LWADLW
Sbjct: 237 YASSQYLEPLILGDTWAAVGWSSDILPTLAREPDLEAVFPASGSALWADLWV-------- 288
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPPAE 175
Q+ P I+QWI + + A + LL + ++ V +
Sbjct: 289 --QV-----QPSETINQWINYWWEDTVANNLSKFTDTISPLLSTTLPVKSQSHRLVAAPK 341
Query: 176 ILARCEFLEPLSEATLSDYE 195
R EFL PLS TL YE
Sbjct: 342 QFERSEFLFPLSPPTLQQYE 361
>gi|428297544|ref|YP_007135850.1| extracellular solute-binding protein [Calothrix sp. PCC 6303]
gi|428234088|gb|AFY99877.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
6303]
Length = 387
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 37/209 (17%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
+DW DLW +L R+S+++ PRE+IG TQ + ++ L L V+
Sbjct: 187 QDWSDLWRDDLRNRVSLLDHPREIIGLTLKKLGKSYNTQDLSTVPQLEAELQSLNKNVKF 246
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
+D + YL+ +GD I+ GWS D+LP + R ++ +VP+SG ++WAD+W P S+ +
Sbjct: 247 YDSSKYLEPLLLGDTLISTGWSHDILPVMTRYPQLSAIVPESGTAIWADMWVNPINSQNQ 306
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQ--TARALPFNTRVKLP-------EELLKGKPSLDTK 166
L+ QWI F Q A + T+ P E++ +P L
Sbjct: 307 VD-----------LLSQWINFYWQPDIANKVSVLTKTNSPIPTTITTEDI---QPQLQKL 352
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYE 195
LI+ +L + EF+ PL+ Y+
Sbjct: 353 LISN---QALLEKSEFIFPLAAEVEKQYQ 378
>gi|56751841|ref|YP_172542.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Synechococcus elongatus PCC 6301]
gi|56686800|dbj|BAD80022.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 6301]
Length = 342
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG----------TQAAAGRI-AVQQNLALLGNQVR 54
+DW DLW PEL G++ + + PREVIG QA I ++ LA L QV+
Sbjct: 143 LQDWTDLWRPELRGQLILPDDPREVIGLTLKRLGWSYNQANLAEIPQLEPLLAALQQQVK 202
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
L+ +YL+ +GD AVGWS+D+L A++R S +A VVP+SG ++W DLW P
Sbjct: 203 LYSSRNYLQPLLLGDALAAVGWSADILAALRRDSRLAAVVPRSGTAIWLDLWVQPQ---- 258
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTR--VKLPEELLKGKPSLDTKLIAGVP 172
GRV F +WI+F A F+ P L + +P
Sbjct: 259 ------GRVSEVFS--DRWIDFGWAPTIATQFSQLGPAASPAILTAAAVAPVDANPLQIP 310
Query: 173 PAEILARCEFLEPLSEATLSDY 194
P +L + E + PL EA Y
Sbjct: 311 PTAVLDKSELILPLPEAVRDRY 332
>gi|81301075|ref|YP_401283.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 7942]
gi|81169956|gb|ABB58296.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 7942]
Length = 354
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG----------TQAAAGRI-AVQQNLALLGNQVR 54
+DW DLW PEL G++ + + PREVIG QA I ++ LA L QV+
Sbjct: 155 LQDWTDLWRPELRGQLILPDDPREVIGLTLKRLGWSYNQANLAEIPQLEPLLAALQQQVK 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
L+ +YL+ +GD AVGWS+D+L A++R S +A VVP+SG ++W DLW P
Sbjct: 215 LYSSRNYLQPLLLGDALAAVGWSADILAALRRDSRLAAVVPRSGTAIWLDLWVQPQ---- 270
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTR--VKLPEELLKGKPSLDTKLIAGVP 172
GRV F +WI+F A F+ P L + +P
Sbjct: 271 ------GRVSEVFS--DRWIDFGWAPTIATQFSQLGPAASPAILTAAAVAPVDANPLQIP 322
Query: 173 PAEILARCEFLEPLSEATLSDY 194
P +L + E + PL EA Y
Sbjct: 323 PTAVLDKSELILPLPEAVRDRY 344
>gi|428217472|ref|YP_007101937.1| extracellular solute-binding protein [Pseudanabaena sp. PCC 7367]
gi|427989254|gb|AFY69509.1| extracellular solute-binding protein family 1 [Pseudanabaena sp.
PCC 7367]
Length = 419
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
K W DLW PEL RI + +SPREVIG + A+ L L QV
Sbjct: 215 IKSWADLWRPELKRRIVLPDSPREVIGLVLKKLGDSYNNENLNAIAALPTELEQLHQQVL 274
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ YL+ I D W VGWS D+ + R + VVVP+ G +LW+D+W +P
Sbjct: 275 FYSSDRYLQPLIIEDAWAVVGWSHDIEAQIDRQPKLRVVVPEEGTALWSDIWVLPKQQPR 334
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEEL--LKGKPSLDTKLIAG-- 170
T ++WI + L A A N L + + + L K+ A
Sbjct: 335 PTNSQAA---------YKWINYTLSPAIA---NQITALTDAVSTMPVNADLPAKIRANQL 382
Query: 171 -VPPAEILARCEFLEPLSEATLSDYEWLVANLQKP 204
P E++A+ E L+PLS+ LS+Y L L+ P
Sbjct: 383 KFPSPEVIAKSELLQPLSDDALSEYLALWQELRSP 417
>gi|427419007|ref|ZP_18909190.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
gi|425761720|gb|EKV02573.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
Length = 380
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 87/201 (43%), Gaps = 41/201 (20%)
Query: 2 NENGFKDWKDLWLPELAGRISMVNSPREVIGT-----------QAAAGRIAVQQNLALLG 50
N W DLW PELAGRI+M N PR I +A + VQ+ L L
Sbjct: 180 NNKPITKWADLWRPELAGRIAMPNQPRLAIAIVLKALGYSVNDEAVLLQDDVQEQLLALY 239
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
QV++FD YLK DVW+AVGWS D+L + R + V P+ G L +DLW P
Sbjct: 240 RQVKVFDSQAYLKALVNEDVWLAVGWSGDILATLVRYRRLGAVHPQEGTVLTSDLWVAPT 299
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG 170
++L + W+EFC Q +P T + + G
Sbjct: 300 DAKLTEE------------AQAWMEFCWQ----MPIATEISVSS--------------YG 329
Query: 171 VPPAEILARCEFLEPLSEATL 191
V P+ L + E LS+ TL
Sbjct: 330 VSPSFFLPDVKVPEQLSQQTL 350
>gi|255073983|ref|XP_002500666.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226515929|gb|ACO61924.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
Length = 580
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 85/158 (53%), Gaps = 22/158 (13%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVI-------GTQAAA----GRIAVQQNL-ALLGNQVR 54
+DW DLW PE R+ M + PR+++ G A A G V+ L +L Q+
Sbjct: 318 RDWDDLWRPEFKRRVGMGSGPRQMLTAALRAEGMSANADGWGGGGNVRARLESLRREQLL 377
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ D YL+ G GD WIAVG S DVL ++ S + VVVP SG +L+AD+W +PA++
Sbjct: 378 IQDDVQYLQALGNGDAWIAVGNSDDVLSMARKSSLIGVVVPMSGTTLFADVWCVPASA-- 435
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKL 152
++ GG PL +QW ++ Q AR N RV L
Sbjct: 436 -ARKPGGVS----PLTNQWFDYTTQPAR---VNLRVGL 465
>gi|145355770|ref|XP_001422123.1| ABC(binding protein) family transporter: polyamine [Ostreococcus
lucimarinus CCE9901]
gi|144582363|gb|ABP00440.1| ABC(binding protein) family transporter: polyamine [Ostreococcus
lucimarinus CCE9901]
Length = 388
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 21/158 (13%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVI-------GTQAAAGRIA-----VQQNLALLGNQVR 54
+DW+DL+ P L G I M N+PR V+ G A A I V + L V+
Sbjct: 166 RDWEDLFDPRLKGLIGMPNAPRLVLSAALKAEGMSANASDIGGADGRVSARVRALRENVK 225
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+FD Y + GD + +G S DV +R + + + VP SG +LW+D W +P A+
Sbjct: 226 VFDDLQYTQAIACGDCAVVIGPSEDVFSVARRSTLIGLAVPSSGTTLWSDCWVVPTAT-- 283
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKL 152
+ + GP P++ QWI++ LQ AR N RV L
Sbjct: 284 ----VANKGGGPSPVLEQWIDYTLQPAR---VNMRVGL 314
>gi|308813680|ref|XP_003084146.1| putrescine-binding periplasmic protein-related (ISS) [Ostreococcus
tauri]
gi|116056029|emb|CAL58562.1| putrescine-binding periplasmic protein-related (ISS) [Ostreococcus
tauri]
Length = 429
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 8 DWKDLWLPELAGRISMVNSPREVI-------GTQAAAGRIA-----VQQNLALLGNQVRL 55
DW DL+ P L G I M N+PR V+ G G + V + L V++
Sbjct: 212 DWSDLFDPRLQGMIGMPNAPRLVLSAALKAEGMSVNVGDVGGVDGRVSARVRQLRESVKV 271
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
FD YL+ GD + VG S DV +R + + VVP+SG +LW+D W +P S
Sbjct: 272 FDDLQYLQALACGDCAVVVGPSEDVFSVARRSTLIVPVVPRSGTTLWSDCWVVPTTS--- 328
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKL 152
+GG GP P + QWI + L AR N RV L
Sbjct: 329 VTNVGG---GPSPALEQWINYTLSPAR---VNMRVGL 359
>gi|302829761|ref|XP_002946447.1| hypothetical protein VOLCADRAFT_103032 [Volvox carteri f.
nagariensis]
gi|300268193|gb|EFJ52374.1| hypothetical protein VOLCADRAFT_103032 [Volvox carteri f.
nagariensis]
Length = 561
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 96/219 (43%), Gaps = 64/219 (29%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIGTQ--------------------------------- 34
DW DL P LAGR++M++SPRE++
Sbjct: 221 DWCDLLQPALAGRVAMLDSPRELLAAAVRSLAAENAGLGDGGGRGVDGGKSGRAWVSVNA 280
Query: 35 -----AAAG--RIAVQQNLALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM 87
AAAG +Q +A QVRLF +++ GDVW VG+S +++ +R
Sbjct: 281 SARELAAAGISEEVLQGRVAAFRRQVRLFSSQDHVRALQAGDVWAVVGYSQELVQLAERS 340
Query: 88 -SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPF 146
S++ ++ P SG LWAD+WA+PA +R G R GP PL+ WIEF L R
Sbjct: 341 GSSIELLAPLSGTQLWADVWAVPAGAR-----GGHRHSGPSPLLPVWIEFTLSPGR---- 391
Query: 147 NTRVKLPEELLKGKPSLDTKLIAGVPPAEILARCEFLEP 185
+ G+PSL G P A + A E +P
Sbjct: 392 ----------ITGQPSLK----GGAPAALLPATPEPTDP 416
>gi|86609220|ref|YP_477982.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557762|gb|ABD02719.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 383
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-TQAAAGR----------IAVQQNLALLGNQVR 54
+DW DLW PELAG++++ + PREVIG T GR + ++Q L L QV
Sbjct: 168 IRDWADLWRPELAGKLTLPDHPREVIGLTLKKMGRSYNDPLNPEDVELRQELGSLHRQVL 227
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA--- 111
+ + YL + + D W+AVGWS D+ +AVV+P SG+++W D+W P
Sbjct: 228 TYTSSDYLPILRLADSWVAVGWSQDLYATQANYPELAVVIPASGSAIWWDVWVRPHVEDH 287
Query: 112 SRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV--------KLPEELLKGKPSL 163
+ + L+ W++F L F R+ LP +L + P L
Sbjct: 288 AHEDNAHTESTQTDSGSLLADWLDFVLNPE----FAPRLVNLSGIPSVLPLDLAQLAPRL 343
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDY 194
+ + R E PLS A Y
Sbjct: 344 QRRADLQI---STWQRSEIWRPLSSAEAESY 371
>gi|443476073|ref|ZP_21065996.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
gi|443018979|gb|ELS33141.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
Length = 361
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 32/205 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGR----IAVQQNLALLGNQV 53
W DLW PEL ++S+ + REVIG A R A+ Q+L L +QV
Sbjct: 160 WSDLWRPELKQKLSLPDDAREVIGLVLKKMGQSYQVDNLAERKDIFTALIQDLKSLSSQV 219
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ +YL+ D AVGW+SD+ K+ N+ VV+P+ G +LW+D+W IP
Sbjct: 220 LTYSSDNYLQSLLNTDTLAAVGWTSDMYKTAKQNPNLKVVIPQDGTALWSDIWVIP---- 275
Query: 114 LETKQIGGRVRGPFPLIHQ-WIEFCLQTARALPFN--TRVKLPEELLKGKPSLDTKLIAG 170
+G + W+ FCL A+ T P L P+
Sbjct: 276 ----------KGEVAIAATAWMNFCLTPEIAIQLTSLTDAVSPSSALDKVPNSVKADPIK 325
Query: 171 VPPAEILARCEFLEPLSEATLSDYE 195
+ILA+ E + PLS TL+ Y+
Sbjct: 326 FFSQDILAKSELILPLSPTTLTQYK 350
>gi|86605920|ref|YP_474683.1| polyamine ABC transporter polyamine-binding protein [Synechococcus
sp. JA-3-3Ab]
gi|86554462|gb|ABC99420.1| polyamine ABC transporter, polyamine-binding protein [Synechococcus
sp. JA-3-3Ab]
Length = 374
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIG-TQAAAGR----------IAVQQNLALLGNQ 52
+ +DW DLW PELAG++++ + PREVIG GR +++ L L Q
Sbjct: 166 DPIRDWADLWRPELAGKLTLPDHPREVIGLVLKKLGRSYNDPLDPEEAELRRELGSLHRQ 225
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V + YL + + D W+AVGWS D+ + V +P SG+++W D+W P +
Sbjct: 226 VLAYTSADYLPMLRLADSWVAVGWSQDLYATQANYPELEVAIPASGSAIWWDVWVRPHRA 285
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE----ELLKGKPSLDTKLI 168
+ ++ G L+ WI+F L A +P +L + P L +
Sbjct: 286 HNASPELEGS------LLADWIDFVLTPEFAPRLVNLSGIPSVWPLDLAQLSPRLRRR-- 337
Query: 169 AGVPPAEILARCEFLEPLSEATLSDY 194
A P+ R E PLS A Y
Sbjct: 338 ADFQPS-TWERAEIWRPLSPAEAESY 362
>gi|443316967|ref|ZP_21046392.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
gi|442783430|gb|ELR93345.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
Length = 393
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 96/215 (44%), Gaps = 34/215 (15%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG---------------TQAAAGRIAVQQNLALLGN 51
+ W DLW ELAGR+ + PR ++G TQ A + N
Sbjct: 177 QSWTDLWRSELAGRVILPRHPRLLLGIILKSLEESANHPDPTQVAELGARMAAMAGAKPN 236
Query: 52 QVRL-----FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 106
F THY++ G+ W+AVGWS+++ P ++ +A VVP+ G L ADLW
Sbjct: 237 PAGTSPALTFADTHYIEPLIRGEAWVAVGWSTEIRPVLEGYRQLAAVVPEPGTLLSADLW 296
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQ-WIEFCLQTARALPFNTRVK-LPEELLKGKPSLD 164
PA Q G R+ P Q WI++ Q ALP + L +LL G
Sbjct: 297 VHPA------PQQGARM--PLSAPEQAWIDYWWQENTALPLTLFSQGLAPQLLDGTIGDL 348
Query: 165 TKLIAG----VPPAEILARCEFLEPLSEATLSDYE 195
T + +P EI+A EFL PL+ +L+ YE
Sbjct: 349 TPDFSAAQLLLPEGEIMANSEFLLPLAADSLAQYE 383
>gi|307111783|gb|EFN60017.1| hypothetical protein CHLNCDRAFT_9420, partial [Chlorella
variabilis]
Length = 204
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 14/119 (11%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGR---IAVQQNLALLGN 51
+DW DL P+L GR++ ++SPR+V+G + AA R ++ Q +
Sbjct: 86 IRDWSDLLQPQLKGRVAFMDSPRDVVGAALKTLGLGYNSSAADIRRCGLSEQDVRTRVQR 145
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
VR+F + +L+ G GDV VGWS D+LP V R +N+ P SG SL+AD W IPA
Sbjct: 146 LVRVFSSSDHLRALGAGDVDAVVGWSDDLLPLVLRTNNLEAAAPLSGTSLFADCWCIPA 204
>gi|303290100|ref|XP_003064337.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226453935|gb|EEH51242.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 647
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFD-RTHYLKV-- 64
DW DL+ P+ ++ + + R ++ AG + + RL+D RT L
Sbjct: 370 DWPDLFRPQYKKKVGIASGSRFMLTVALRAGGRSANATDVDDATRNRLYDLRTTQLATQV 429
Query: 65 -------FGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
GDVWI G S DVL + SN+ VVVP SG +L+AD W +PAA+ +
Sbjct: 430 DLDALQGLSNGDVWIIAGNSDDVLKTAAKSSNIGVVVPSSGTTLYADAWCVPAAALDKPG 489
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKL 152
+ PL+ QW +F Q AR N RV L
Sbjct: 490 GVS-------PLVDQWFDFTTQPART---NLRVGL 514
>gi|224139138|ref|XP_002326777.1| predicted protein [Populus trichocarpa]
gi|222834099|gb|EEE72576.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 61/107 (57%), Gaps = 12/107 (11%)
Query: 81 LPAVKRMSNVAVVVPKSGASLWADLWA-IPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ 139
P KRMSNVAVV P +G SLWADL + +P L+ + G ++ LIH+WIE LQ
Sbjct: 3 FPLPKRMSNVAVVSPNTGTSLWADLQSQLP--RDLKLIRSGAKLEDHPSLIHEWIEIRLQ 60
Query: 140 TARALPFNTRV---------KLPEELLKGKPSLDTKLIAGVPPAEIL 177
ARALPF V +P+EL K KP L T LIA V P +I
Sbjct: 61 AARALPFKQEVIPGATPSDIGVPKELAKCKPKLGTNLIAEVHPPDIF 107
>gi|22298258|ref|NP_681505.1| hypothetical protein tll0716 [Thermosynechococcus elongatus BP-1]
gi|22294437|dbj|BAC08267.1| tll0716 [Thermosynechococcus elongatus BP-1]
Length = 352
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG---------TQAAAGRIAVQQNLALLGNQVRLFDR 58
DW LW P + G S++N+PREVIG + A +++ L L R
Sbjct: 158 DWDVLWHPAVQGHYSLLNTPREVIGLTLKSLGLSYNSPAPHPELRERLQHLRQGCRFLSS 217
Query: 59 THYLKVFGIGDVWIAVGWSSDVLPAVKRM-SNVAVVVPKSGASLWADLWAIPAASRLETK 117
YL+ +G +AVGWS+D+LP +++ V P SG +LW DLW P
Sbjct: 218 DAYLQPLMLGSTQLAVGWSTDLLPLLQQDPQTYGAVFPASGTALWVDLWVCP-------- 269
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKG-KPSLDTKLIAGVPPAEI 176
R P W+ + Q A + P L++ + +L ++ I P
Sbjct: 270 ------REPNAAALAWLNYWWQPQVAERLSQFSPAPSPLVRNLRETLLSRYIPFATPTAF 323
Query: 177 LARCEFLEPLSEATLSDYE 195
A+ E L PL AT Y+
Sbjct: 324 -AKSEVLLPLDGATQKAYD 341
>gi|254412638|ref|ZP_05026411.1| Bacterial extracellular solute-binding protein, putative
[Coleofasciculus chthonoplastes PCC 7420]
gi|196180373|gb|EDX75364.1| Bacterial extracellular solute-binding protein, putative
[Coleofasciculus chthonoplastes PCC 7420]
Length = 371
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 89/203 (43%), Gaps = 38/203 (18%)
Query: 7 KDWKDLWL--PELAGRISMVNSPREVIGTQAAAGRI-------------AVQQNLALLGN 51
+DW LW+ +LA R+++VN REV+G AA ++ A Q L L
Sbjct: 171 EDWDYLWVYQQQLAKRMTLVNDVREVMG--AALKKLGYSYNSTNVEHIQAAYQALMDLKP 228
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 111
+ F + GD+ IA+ +SSD + ++ V+P+SG+SLW D AIP
Sbjct: 229 AIASFTSDAWRPQILSGDLKIAMCYSSDATEIMPENEDLRYVLPESGSSLWIDTLAIP-- 286
Query: 112 SRLETKQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDT 165
+ V G + WI F LQ A L F T K LL DT
Sbjct: 287 ------KTAPNVEGAY----AWINFMLQPDVAARIVERLSFATPNKAAYNLLPPDLKNDT 336
Query: 166 KLIAGVPPAEILARCEFLEPLSE 188
L PP E L RCE LEPL E
Sbjct: 337 SLF---PPEEALERCENLEPLGE 356
>gi|313884789|ref|ZP_07818543.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619988|gb|EFR31423.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Eremococcus
coleocola ACS-139-V-Col8]
Length = 358
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 38/214 (17%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIGT------------QAAAGRIAVQQNLAL 48
+ E +DW DLW P G+I M++ RE+IG ++ R A + L
Sbjct: 150 IEEGSIRDWADLWNPAYQGKILMIDGAREMIGIGLQSLGYSLNDIDSSHIRAAADKMKTL 209
Query: 49 LGNQVRLFDRTHYLKV-FGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 107
+ N V L T +K+ G+V +AV +S + A+ + ++A VVP+ G++LW D +A
Sbjct: 210 MPNVVGLI--TDEIKMHIAEGEVPLAVTFSGEAATAMDQNEDLAYVVPEKGSNLWLDTFA 267
Query: 108 IPAASRLETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNT-----RVKLPEELLKGK 160
IP +I V G + LI+ I E + A + + T + LP+E+ K
Sbjct: 268 IP--------KIADNVEGAYALINFLISKEASIANAEYVGYATPNMEAKAALPKEITDDK 319
Query: 161 PSLDTKLIAGVPPAEILARCEFLEPLSEATLSDY 194
A P I+ + E L +A L +Y
Sbjct: 320 --------AFYPDQAIMDKLEVYRNLGQAKLIEY 345
>gi|427736973|ref|YP_007056517.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
gi|427372014|gb|AFY55970.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
Length = 361
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 42/205 (20%)
Query: 7 KDWKDLWLPE--LAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQV 53
+DW LW + L+ RI+++N REVIG +Q+ + L +L +
Sbjct: 161 QDWDYLWQNQKKLSKRITLLNDAREVIGGVLKMLGYSYNSQSGKQIQQAYEKLQVLKPDI 220
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F + GD+ +A+ +SSD + + + PKSG+SLW D AIP
Sbjct: 221 AAFSTDAWRNQILSGDLVLAMCYSSDAFLITRDNPKLKYITPKSGSSLWTDTIAIP---- 276
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQ---TAR-------ALPFNTRVKLPEELLKGKPSL 163
+ T I G ++WI F L+ AR A P +L E ++ P+L
Sbjct: 277 ITTSNIDG--------AYEWINFMLKPEVAARMSQRLGVATPNQAGFELLPEKIQNNPTL 328
Query: 164 DTKLIAGVPPAEILARCEFLEPLSE 188
PP IL +CE L P+ E
Sbjct: 329 -------FPPENILEKCERLSPVGE 346
>gi|354566674|ref|ZP_08985845.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
gi|353544333|gb|EHC13787.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
Length = 361
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 86/201 (42%), Gaps = 34/201 (16%)
Query: 7 KDWKDLWL--PELAGRISMVNSPREVIG--------TQAAAGRIAVQQ---NLALLGNQV 53
+DW+ LW +L +I+++N REV+G + + V+Q L L +
Sbjct: 161 EDWEYLWQNQQQLNNKITLLNDVREVMGAVLKMLGYSYNSKNETEVKQAYEKLQALKGAI 220
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
FD + GD+ +++ +SSD + + VVPKSG+SLW D IP +R
Sbjct: 221 AAFDTDAWRNQIVAGDLLLSMCYSSDAVKITQENPKFKYVVPKSGSSLWTDTVVIPTTAR 280
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV------KLPEELLKGKPSLDTKL 167
I G + WI F Q A + R+ + ELL K D +
Sbjct: 281 ----NIDG--------AYAWINFIFQPEVAAQISQRLWVTTSSRAAFELLPNKIKNDPNV 328
Query: 168 IAGVPPAEILARCEFLEPLSE 188
PP IL +CE + PL E
Sbjct: 329 F---PPDSILEKCERITPLGE 346
>gi|300869344|ref|ZP_07113934.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
gi|300332643|emb|CBN59132.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
Length = 376
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 42/208 (20%)
Query: 6 FKDWKDLWLPE--LAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVR-LFDRTHYL 62
+DW DLW + L+ R++++N REV+G AA R+ N++R ++R L
Sbjct: 175 IEDWDDLWKNQKALSKRMTLLNDLREVMG---AALRMLGYSLNTTNPNEIREAYERLSEL 231
Query: 63 K-------------VFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
K +GD+ +A+ +SSD + +N+ +VP+SG+SLW D IP
Sbjct: 232 KPDLASFTTDAWRPQMLVGDLMVAMCYSSDANEVIPENTNLQYIVPRSGSSLWTDTLVIP 291
Query: 110 AASRLETKQIGGRVRGPFP-LIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPS 162
+ P P ++WI F LQ A L F+T + LL+ +
Sbjct: 292 KFA-------------PNPEAAYKWINFMLQGDVAASLVDRLSFSTPSEEAFNLLEPEVR 338
Query: 163 LDTKLIAGVPPAEILARCEFLEPLSEAT 190
+ L PP EILA+C+ + P+ E T
Sbjct: 339 ENKILF---PPEEILAKCQGIAPVGEVT 363
>gi|254421830|ref|ZP_05035548.1| hypothetical protein S7335_1980 [Synechococcus sp. PCC 7335]
gi|196189319|gb|EDX84283.1| hypothetical protein S7335_1980 [Synechococcus sp. PCC 7335]
Length = 393
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 84/207 (40%), Gaps = 35/207 (16%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQN---- 45
F W+DL P+L+ I++ + PR +I ++ ++ Q N
Sbjct: 175 FSSWQDLLAPDLSRSIALPSHPRILISLLQKLQTGSFNPVSTDNPVSSEQLLSQLNDQLA 234
Query: 46 --LALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
A L QV+ +D LK DV + VGWSSDV A+KR ++ VVP G+ L A
Sbjct: 235 APFAKLTAQVKTYDSNTALKALINEDVKVVVGWSSDVAVALKRYRDLRAVVPDEGSLLSA 294
Query: 104 DLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVK-LPEELLKGKPS 162
D+W P + L + WI FC Q A +T K + L
Sbjct: 295 DMWVQPKGATLTSA------------AKTWISFCWQQGPATELSTTPKGISPIFLATDKQ 342
Query: 163 LDTKLIAGVPPAEILARCEFLEPLSEA 189
L + L L E L PLS++
Sbjct: 343 LPSSLERTQLSLRALQNSELLSPLSQS 369
>gi|167630347|ref|YP_001680846.1| spermidine/putrescine abc transporter spermidine/putrescine-binding
protein [Heliobacterium modesticaldum Ice1]
gi|167593087|gb|ABZ84835.1| spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Heliobacterium
modesticaldum Ice1]
Length = 369
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W+DLW P+ GR+ ++N REV+G T+ +L L V FD
Sbjct: 172 WQDLWNPKYKGRLVLLNDSREVLGMALKKNGFSNSTKDQKELDKAFNDLKTLAPNVLAFD 231
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ F + WI WS D K +VA V+PK G ++WAD AIP ++
Sbjct: 232 TDDIKQKFITEEAWIGTMWSGDAAFVYKDNKDVAFVIPKEGTTIWADTLAIPKGAK 287
>gi|75908519|ref|YP_322815.1| extracellular solute-binding protein [Anabaena variabilis ATCC
29413]
gi|75702244|gb|ABA21920.1| extracellular solute-binding protein, family 1 [Anabaena variabilis
ATCC 29413]
Length = 360
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 34/199 (17%)
Query: 7 KDWKDLWLPE--LAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQV 53
+DW+ LW + L+ RI+++N REVIG +Q A + L+ L +
Sbjct: 160 EDWEYLWKNQKLLSKRITLLNDVREVIGAVLRMLGYSYNSQNEAQIKQAYEKLSTLKPAI 219
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
FD + GD+ +A+ +S+D +K + V+P+SG+SLW D IP ++
Sbjct: 220 AAFDTDAWRNQILAGDLALAMCYSADATKVIKENPKLKYVIPRSGSSLWTDTIVIPKSA- 278
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE------ELLKGKPSLDTKL 167
+ G + WI F LQ A + R+K+ E L + + L
Sbjct: 279 ---PNLDG--------AYAWINFILQPEVAATTSERLKISTPNNAAFEQLPKQIKTNENL 327
Query: 168 IAGVPPAEILARCEFLEPL 186
PP+ IL +CE + P+
Sbjct: 328 ---YPPSSILDKCERISPV 343
>gi|152974814|ref|YP_001374331.1| extracellular solute-binding protein [Bacillus cytotoxicus NVH
391-98]
gi|152023566|gb|ABS21336.1| extracellular solute-binding protein family 1 [Bacillus cytotoxicus
NVH 391-98]
Length = 350
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + GR++++N REV+G T+ A +L L + FD
Sbjct: 152 WNDLWNEKYKGRVTLLNDSREVLGMALKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 211
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 212 TDNIKQKFITEDTWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 267
>gi|423509201|ref|ZP_17485732.1| hypothetical protein IG3_00698 [Bacillus cereus HuA2-1]
gi|402456492|gb|EJV88265.1| hypothetical protein IG3_00698 [Bacillus cereus HuA2-1]
Length = 349
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WNDLWNDKYKGHVTLLNDSREVLGMGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITADAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|228920100|ref|ZP_04083449.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|423579582|ref|ZP_17555693.1| hypothetical protein IIA_01097 [Bacillus cereus VD014]
gi|423637961|ref|ZP_17613614.1| hypothetical protein IK7_04370 [Bacillus cereus VD156]
gi|228839556|gb|EEM84848.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|401218044|gb|EJR24729.1| hypothetical protein IIA_01097 [Bacillus cereus VD014]
gi|401272763|gb|EJR78754.1| hypothetical protein IK7_04370 [Bacillus cereus VD156]
Length = 349
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + GR++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGRVTLLNDSREVLGMGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|17232535|ref|NP_489083.1| polyamine-binding protein of polyamine ABC transporter [Nostoc sp.
PCC 7120]
gi|17134181|dbj|BAB76742.1| polyamine-binding protein of polyamine ABC transporter [Nostoc sp.
PCC 7120]
Length = 360
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 34/199 (17%)
Query: 7 KDWKDLWLPE--LAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQV 53
+DW+ LW + L+ R++++N REVIG +Q A + L+ L +
Sbjct: 160 EDWEYLWRNQKLLSKRMTLLNDVREVIGAVLRMLGYSYNSQNEAQIKQAYEKLSTLKPAI 219
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
FD + GD+ +A+ +S+D +K + V+P+SG+SLW D IP ++
Sbjct: 220 AAFDTDAWRNQILAGDLALAMCYSADATKVIKENPKLKYVIPRSGSSLWTDTIVIPKSA- 278
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE------ELLKGKPSLDTKL 167
+ G + WI F LQ A + R+K+ E L + + L
Sbjct: 279 ---PNLDG--------AYAWINFILQPEVAATTSERLKISTPNNAAFEQLPKQIKTNENL 327
Query: 168 IAGVPPAEILARCEFLEPL 186
PP+ IL +CE + P+
Sbjct: 328 ---YPPSSILDKCERISPV 343
>gi|423408761|ref|ZP_17385910.1| hypothetical protein ICY_03446 [Bacillus cereus BAG2X1-3]
gi|401657031|gb|EJS74543.1| hypothetical protein ICY_03446 [Bacillus cereus BAG2X1-3]
Length = 349
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W+DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WEDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKEDAELKTAANDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423481266|ref|ZP_17457956.1| hypothetical protein IEQ_01044 [Bacillus cereus BAG6X1-2]
gi|401146026|gb|EJQ53546.1| hypothetical protein IEQ_01044 [Bacillus cereus BAG6X1-2]
Length = 349
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423472737|ref|ZP_17449480.1| hypothetical protein IEM_04042 [Bacillus cereus BAG6O-2]
gi|402427298|gb|EJV59407.1| hypothetical protein IEM_04042 [Bacillus cereus BAG6O-2]
Length = 349
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423397904|ref|ZP_17375105.1| hypothetical protein ICU_03598 [Bacillus cereus BAG2X1-1]
gi|401649212|gb|EJS66798.1| hypothetical protein ICU_03598 [Bacillus cereus BAG2X1-1]
Length = 349
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W+DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WEDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKEDAELKTAANDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423455165|ref|ZP_17432018.1| hypothetical protein IEE_03909 [Bacillus cereus BAG5X1-1]
gi|401134948|gb|EJQ42555.1| hypothetical protein IEE_03909 [Bacillus cereus BAG5X1-1]
Length = 349
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423555852|ref|ZP_17532155.1| hypothetical protein II3_01057 [Bacillus cereus MC67]
gi|401196194|gb|EJR03140.1| hypothetical protein II3_01057 [Bacillus cereus MC67]
Length = 349
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|229160340|ref|ZP_04288338.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
R309803]
gi|228623064|gb|EEK79892.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
R309803]
Length = 349
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKVDAELKTASNDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423524813|ref|ZP_17501286.1| hypothetical protein IGC_04196 [Bacillus cereus HuA4-10]
gi|401169039|gb|EJQ76286.1| hypothetical protein IGC_04196 [Bacillus cereus HuA4-10]
Length = 349
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNDKYKGHVTLLNDSREVLGMGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|163939195|ref|YP_001644079.1| extracellular solute-binding protein [Bacillus weihenstephanensis
KBAB4]
gi|229010675|ref|ZP_04167875.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
DSM 2048]
gi|229057017|ref|ZP_04196411.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH603]
gi|229166221|ref|ZP_04293981.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH621]
gi|423486501|ref|ZP_17463183.1| hypothetical protein IEU_01124 [Bacillus cereus BtB2-4]
gi|423492225|ref|ZP_17468869.1| hypothetical protein IEW_01123 [Bacillus cereus CER057]
gi|423500984|ref|ZP_17477601.1| hypothetical protein IEY_04211 [Bacillus cereus CER074]
gi|423516040|ref|ZP_17492521.1| hypothetical protein IG7_01110 [Bacillus cereus HuA2-4]
gi|423594690|ref|ZP_17570721.1| hypothetical protein IIG_03558 [Bacillus cereus VD048]
gi|423601276|ref|ZP_17577276.1| hypothetical protein III_04078 [Bacillus cereus VD078]
gi|423663736|ref|ZP_17638905.1| hypothetical protein IKM_04133 [Bacillus cereus VDM022]
gi|423667066|ref|ZP_17642095.1| hypothetical protein IKO_00763 [Bacillus cereus VDM034]
gi|423676900|ref|ZP_17651839.1| hypothetical protein IKS_04443 [Bacillus cereus VDM062]
gi|163861392|gb|ABY42451.1| extracellular solute-binding protein family 1 [Bacillus
weihenstephanensis KBAB4]
gi|228617319|gb|EEK74384.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH621]
gi|228720294|gb|EEL71870.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH603]
gi|228750640|gb|EEM00466.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
DSM 2048]
gi|401154308|gb|EJQ61726.1| hypothetical protein IEY_04211 [Bacillus cereus CER074]
gi|401156509|gb|EJQ63913.1| hypothetical protein IEW_01123 [Bacillus cereus CER057]
gi|401165883|gb|EJQ73193.1| hypothetical protein IG7_01110 [Bacillus cereus HuA2-4]
gi|401223642|gb|EJR30210.1| hypothetical protein IIG_03558 [Bacillus cereus VD048]
gi|401230703|gb|EJR37209.1| hypothetical protein III_04078 [Bacillus cereus VD078]
gi|401295636|gb|EJS01260.1| hypothetical protein IKM_04133 [Bacillus cereus VDM022]
gi|401304510|gb|EJS10062.1| hypothetical protein IKO_00763 [Bacillus cereus VDM034]
gi|401307161|gb|EJS12618.1| hypothetical protein IKS_04443 [Bacillus cereus VDM062]
gi|402439282|gb|EJV71289.1| hypothetical protein IEU_01124 [Bacillus cereus BtB2-4]
Length = 349
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|229132181|ref|ZP_04261039.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST196]
gi|228651328|gb|EEL07305.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST196]
Length = 349
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|228990391|ref|ZP_04150356.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
pseudomycoides DSM 12442]
gi|228996492|ref|ZP_04156131.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock3-17]
gi|229004143|ref|ZP_04161944.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock1-4]
gi|228757004|gb|EEM06248.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock1-4]
gi|228763124|gb|EEM12032.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock3-17]
gi|228768917|gb|EEM17515.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
pseudomycoides DSM 12442]
Length = 349
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G TQ A +L L + FD
Sbjct: 151 WSDLWNEKYKGHVTLLNDSREVLGVGLKKNGFSNSTQNDAELKTAAADLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423366876|ref|ZP_17344309.1| hypothetical protein IC3_01978 [Bacillus cereus VD142]
gi|401086856|gb|EJP95075.1| hypothetical protein IC3_01978 [Bacillus cereus VD142]
Length = 349
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K ++ VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITADAWIGTVWSGDAAFIAKDNKDIEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423420670|ref|ZP_17397759.1| hypothetical protein IE3_04142 [Bacillus cereus BAG3X2-1]
gi|401101237|gb|EJQ09228.1| hypothetical protein IE3_04142 [Bacillus cereus BAG3X2-1]
Length = 349
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229016632|ref|ZP_04173570.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1273]
gi|229022847|ref|ZP_04179368.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1272]
gi|228738458|gb|EEL88933.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1272]
gi|228744663|gb|EEL94727.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1273]
Length = 349
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|253575509|ref|ZP_04852846.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251845156|gb|EES73167.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 335
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG----------TQAAAGRIAVQ-QNLALLGNQVRLFD 57
W+DLW PE G++ +++ REVIG + G I ++L L V FD
Sbjct: 137 WEDLWNPEYKGKVILLDDNREVIGMALKKNGYSNSSTDEGEITTAVEDLKKLLPSVLAFD 196
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + + WIA WS D + +VA VVPK G ++W+D +AIP S+
Sbjct: 197 TDNIKQKMIQEEGWIATVWSGDASYIAQDNPDVAYVVPKEGGTIWSDNYAIPKDSK 252
>gi|228907017|ref|ZP_04070883.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 200]
gi|228852631|gb|EEM97419.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 200]
Length = 349
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKEDAELKTAADDLKKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|320353641|ref|YP_004194980.1| family 1 extracellular solute-binding protein [Desulfobulbus
propionicus DSM 2032]
gi|320122143|gb|ADW17689.1| extracellular solute-binding protein family 1 [Desulfobulbus
propionicus DSM 2032]
Length = 350
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 84/203 (41%), Gaps = 34/203 (16%)
Query: 11 DLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-----------LALLGNQVRLFDRT 59
DLW PEL G++ + N PREV+G ++ + L L QVR+FD
Sbjct: 155 DLWKPELKGKLLLPNDPREVMGIGLKVLGYSINEKDPEHLRQAFERLQSLMPQVRVFDSD 214
Query: 60 HYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP-------AAS 112
+ G+V + W+ + A + + P G SLW D + IP AA
Sbjct: 215 SPKQALLSGEVAAGLVWNGEAYVANNENKAIHYLYPPEGFSLWVDSFCIPKGAAHVEAAH 274
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVP 172
R + +V +I Q + + A+ F LP E +K P ++ P
Sbjct: 275 RFIDYVLRPQVSA---IISQSMGYSSPNAKVFDF-----LPAE-MKNNPIVN-------P 318
Query: 173 PAEILARCEFLEPLSEATLSDYE 195
E AR EFL+ L E TL YE
Sbjct: 319 SVEDAARGEFLDSLDEQTLKIYE 341
>gi|228938503|ref|ZP_04101112.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228971382|ref|ZP_04132008.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228977994|ref|ZP_04138374.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis Bt407]
gi|384185302|ref|YP_005571198.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
gi|410673593|ref|YP_006925964.1| spermidine/putrescine-binding periplasmic protein 2 [Bacillus
thuringiensis Bt407]
gi|423382787|ref|ZP_17360043.1| hypothetical protein ICE_00533 [Bacillus cereus BAG1X1-2]
gi|423530753|ref|ZP_17507198.1| hypothetical protein IGE_04305 [Bacillus cereus HuB1-1]
gi|452197614|ref|YP_007477695.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|228781782|gb|EEM29980.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis Bt407]
gi|228788249|gb|EEM36202.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228821240|gb|EEM67256.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|326939011|gb|AEA14907.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
gi|401643647|gb|EJS61341.1| hypothetical protein ICE_00533 [Bacillus cereus BAG1X1-2]
gi|402446087|gb|EJV77951.1| hypothetical protein IGE_04305 [Bacillus cereus HuB1-1]
gi|409172722|gb|AFV17027.1| spermidine/putrescine-binding periplasmic protein 2 [Bacillus
thuringiensis Bt407]
gi|452103007|gb|AGF99946.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 349
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGVGLKKHGFSNSTKEDAELKTAADDLKKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|75760662|ref|ZP_00740689.1| Spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218896320|ref|YP_002444731.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus G9842]
gi|228899966|ref|ZP_04064205.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 4222]
gi|228964344|ref|ZP_04125462.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar sotto str. T04001]
gi|402561620|ref|YP_006604344.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-771]
gi|423361349|ref|ZP_17338851.1| hypothetical protein IC1_03328 [Bacillus cereus VD022]
gi|423564315|ref|ZP_17540591.1| hypothetical protein II5_03719 [Bacillus cereus MSX-A1]
gi|434374327|ref|YP_006608971.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-789]
gi|74491843|gb|EAO55032.1| Spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218543320|gb|ACK95714.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
G9842]
gi|228795353|gb|EEM42842.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228859677|gb|EEN04098.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 4222]
gi|401079797|gb|EJP88091.1| hypothetical protein IC1_03328 [Bacillus cereus VD022]
gi|401197346|gb|EJR04279.1| hypothetical protein II5_03719 [Bacillus cereus MSX-A1]
gi|401790272|gb|AFQ16311.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-771]
gi|401872884|gb|AFQ25051.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-789]
Length = 349
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKEDAELKTAADDLKKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229084376|ref|ZP_04216656.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-44]
gi|228698916|gb|EEL51621.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-44]
Length = 360
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 162 WSDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 221
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 222 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 277
>gi|229143992|ref|ZP_04272408.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST24]
gi|296501969|ref|YP_003663669.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
BMB171]
gi|423643567|ref|ZP_17619185.1| hypothetical protein IK9_03512 [Bacillus cereus VD166]
gi|423654168|ref|ZP_17629467.1| hypothetical protein IKG_01156 [Bacillus cereus VD200]
gi|228639389|gb|EEK95803.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST24]
gi|296323021|gb|ADH05949.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
BMB171]
gi|401274147|gb|EJR80125.1| hypothetical protein IK9_03512 [Bacillus cereus VD166]
gi|401296635|gb|EJS02252.1| hypothetical protein IKG_01156 [Bacillus cereus VD200]
Length = 349
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|30019440|ref|NP_831071.1| spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579]
gi|206968033|ref|ZP_03228989.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1134]
gi|218231222|ref|YP_002366071.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus B4264]
gi|228951768|ref|ZP_04113867.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229043127|ref|ZP_04190854.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH676]
gi|229068938|ref|ZP_04202232.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
F65185]
gi|229078572|ref|ZP_04211130.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-2]
gi|229108843|ref|ZP_04238448.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-15]
gi|229126703|ref|ZP_04255715.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-Cer4]
gi|229149588|ref|ZP_04277820.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1550]
gi|229177795|ref|ZP_04305168.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
172560W]
gi|229189469|ref|ZP_04316486.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10876]
gi|365162078|ref|ZP_09358213.1| hypothetical protein HMPREF1014_03676 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423423468|ref|ZP_17400499.1| hypothetical protein IE5_01157 [Bacillus cereus BAG3X2-2]
gi|423434878|ref|ZP_17411859.1| hypothetical protein IE9_01059 [Bacillus cereus BAG4X12-1]
gi|423505017|ref|ZP_17481608.1| hypothetical protein IG1_02582 [Bacillus cereus HD73]
gi|423647316|ref|ZP_17622886.1| hypothetical protein IKA_01103 [Bacillus cereus VD169]
gi|449088176|ref|YP_007420617.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar kurstaki str. HD73]
gi|29894984|gb|AAP08272.1| Spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579]
gi|206736953|gb|EDZ54100.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1134]
gi|218159179|gb|ACK59171.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
B4264]
gi|228594060|gb|EEK51862.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10876]
gi|228605586|gb|EEK63034.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
172560W]
gi|228633934|gb|EEK90531.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1550]
gi|228656643|gb|EEL12469.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-Cer4]
gi|228674612|gb|EEL29851.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-15]
gi|228704716|gb|EEL57144.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-2]
gi|228714222|gb|EEL66103.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
F65185]
gi|228726219|gb|EEL77449.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH676]
gi|228807890|gb|EEM54410.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|363619395|gb|EHL70714.1| hypothetical protein HMPREF1014_03676 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401115158|gb|EJQ23011.1| hypothetical protein IE5_01157 [Bacillus cereus BAG3X2-2]
gi|401125116|gb|EJQ32876.1| hypothetical protein IE9_01059 [Bacillus cereus BAG4X12-1]
gi|401286134|gb|EJR91967.1| hypothetical protein IKA_01103 [Bacillus cereus VD169]
gi|402454883|gb|EJV86671.1| hypothetical protein IG1_02582 [Bacillus cereus HD73]
gi|449021933|gb|AGE77096.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar kurstaki str. HD73]
Length = 349
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGVGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|30261391|ref|NP_843768.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. Ames]
gi|47526566|ref|YP_017915.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. 'Ames Ancestor']
gi|49184220|ref|YP_027472.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. Sterne]
gi|65318655|ref|ZP_00391614.1| COG0687: Spermidine/putrescine-binding periplasmic protein
[Bacillus anthracis str. A2012]
gi|165870372|ref|ZP_02215027.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0488]
gi|167639331|ref|ZP_02397603.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0193]
gi|170706266|ref|ZP_02896727.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0389]
gi|177651500|ref|ZP_02934289.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0174]
gi|190568736|ref|ZP_03021640.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227815871|ref|YP_002815880.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus anthracis str. CDC 684]
gi|229602179|ref|YP_002865806.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0248]
gi|254733970|ref|ZP_05191684.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Western North America USA6153]
gi|254753730|ref|ZP_05205765.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Vollum]
gi|254758826|ref|ZP_05210853.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Australia 94]
gi|386735088|ref|YP_006208269.1| Extracellular solute-binding protein family 1 precursor [Bacillus
anthracis str. H9401]
gi|421507071|ref|ZP_15953992.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. UR-1]
gi|30255245|gb|AAP25254.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Ames]
gi|47501714|gb|AAT30390.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49178147|gb|AAT53523.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Sterne]
gi|164713867|gb|EDR19389.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0488]
gi|167512770|gb|EDR88144.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0193]
gi|170128800|gb|EDS97666.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0389]
gi|172082778|gb|EDT67841.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0174]
gi|190560152|gb|EDV14133.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227005570|gb|ACP15313.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. CDC 684]
gi|229266587|gb|ACQ48224.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0248]
gi|384384940|gb|AFH82601.1| Extracellular solute-binding protein family 1 precursor [Bacillus
anthracis str. H9401]
gi|401822723|gb|EJT21872.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. UR-1]
Length = 345
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 147 WTDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 206
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 207 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 262
>gi|228957658|ref|ZP_04119405.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|423629753|ref|ZP_17605501.1| hypothetical protein IK5_02604 [Bacillus cereus VD154]
gi|228802000|gb|EEM48870.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|401266887|gb|EJR72956.1| hypothetical protein IK5_02604 [Bacillus cereus VD154]
Length = 349
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423392318|ref|ZP_17369544.1| hypothetical protein ICG_04166 [Bacillus cereus BAG1X1-3]
gi|401634965|gb|EJS52727.1| hypothetical protein ICG_04166 [Bacillus cereus BAG1X1-3]
Length = 349
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V +VPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYIVPKEGGTIWADTLAIPKGAK 266
>gi|228984460|ref|ZP_04144638.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228775326|gb|EEM23714.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 349
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVVGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423460733|ref|ZP_17437530.1| hypothetical protein IEI_03873 [Bacillus cereus BAG5X2-1]
gi|401140786|gb|EJQ48342.1| hypothetical protein IEI_03873 [Bacillus cereus BAG5X2-1]
Length = 349
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDAQLKTAANDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423414921|ref|ZP_17392041.1| hypothetical protein IE1_04225 [Bacillus cereus BAG3O-2]
gi|423429297|ref|ZP_17406301.1| hypothetical protein IE7_01113 [Bacillus cereus BAG4O-1]
gi|401097841|gb|EJQ05863.1| hypothetical protein IE1_04225 [Bacillus cereus BAG3O-2]
gi|401121603|gb|EJQ29392.1| hypothetical protein IE7_01113 [Bacillus cereus BAG4O-1]
Length = 349
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGVGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|167634382|ref|ZP_02392703.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0442]
gi|170686738|ref|ZP_02877958.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0465]
gi|254682552|ref|ZP_05146413.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. CNEVA-9066]
gi|254726214|ref|ZP_05187996.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A1055]
gi|254740343|ref|ZP_05198034.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Kruger B]
gi|421637888|ref|ZP_16078485.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. BF1]
gi|167530270|gb|EDR92996.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0442]
gi|170669261|gb|EDT20004.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0465]
gi|403395447|gb|EJY92686.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. BF1]
Length = 345
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 147 WTDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 206
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 207 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 262
>gi|228932668|ref|ZP_04095542.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228826986|gb|EEM72746.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 349
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WTDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|440682704|ref|YP_007157499.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
gi|428679823|gb|AFZ58589.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
Length = 363
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 34/205 (16%)
Query: 3 ENGFKDWKDLWLPE--LAGRISMVNSPREVIG--------TQAAAGRIAVQQ---NLALL 49
EN +DW+ LW + L R++++N REV+G + + V+Q L +L
Sbjct: 160 ENPPEDWEYLWQNQDKLYKRMTLLNDVREVMGAALKMLGYSYNSQNETEVKQAYEKLKIL 219
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
+ FD + GD+ +A+ +S+D + K V+P+SG+SLW D IP
Sbjct: 220 KPAIAAFDTDAWQNQLLAGDLLLAMCYSTDAVNISKENPKFKYVIPRSGSSLWTDTIVIP 279
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE------ELLKGKPSL 163
+I + G + WI LQ + R+ + E L +
Sbjct: 280 --------KIAANLAGAYA----WINLILQPDVTAKLSKRLNISTPNRAGFEQLPKQSRE 327
Query: 164 DTKLIAGVPPAEILARCEFLEPLSE 188
+T L PP +LA+CE P+ E
Sbjct: 328 NTNLF---PPESLLAKCERSTPIGE 349
>gi|229138074|ref|ZP_04266672.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST26]
gi|229195584|ref|ZP_04322350.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1293]
gi|228587833|gb|EEK45885.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1293]
gi|228645419|gb|EEL01653.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST26]
Length = 306
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 108 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 167
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 168 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 223
>gi|196040686|ref|ZP_03107985.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NVH0597-99]
gi|229090340|ref|ZP_04221584.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-42]
gi|196028476|gb|EDX67084.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NVH0597-99]
gi|228693034|gb|EEL46751.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-42]
Length = 349
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WTDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|443477176|ref|ZP_21067041.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
gi|443017738|gb|ELS32116.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
Length = 382
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQVRLF 56
DW LW + RI++VN PREVIG + Q L L + F
Sbjct: 182 DWSYLWQHKNKLRITLVNDPREVIGMALHTLSYSYNSKEESQIEHAFQKLRELMPAIANF 241
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ GD+ + + +S D + ++ NV V+P +G S+W D AIP +
Sbjct: 242 STDAWRDPLASGDLMMCMAFSGDAISLSRQNPNVKYVLPNNGTSIWTDTIAIPRGA---- 297
Query: 117 KQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLIAG 170
I G H WI + + + + A F T KL + L+ D K I
Sbjct: 298 PNIEG--------AHAWINYVMKPEIAAKISDANSFGTTNKLAKSLIPD----DLKAIKA 345
Query: 171 VPPAE-ILARCEFLEPLSEATLSDYE 195
+ P+E I+A+C+ + L L Y+
Sbjct: 346 LEPSETIIAKCDRITKLDPEALQIYD 371
>gi|49480039|ref|YP_035515.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52144048|ref|YP_082781.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus cereus E33L]
gi|118476862|ref|YP_894013.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis str. Al Hakam]
gi|196035369|ref|ZP_03102774.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
W]
gi|196046554|ref|ZP_03113779.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB108]
gi|218902495|ref|YP_002450329.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus AH820]
gi|225863250|ref|YP_002748628.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus cereus 03BB102]
gi|228913957|ref|ZP_04077581.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228926418|ref|ZP_04089490.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228944986|ref|ZP_04107347.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229120927|ref|ZP_04250169.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
95/8201]
gi|229183580|ref|ZP_04310804.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BGSC 6E1]
gi|301052926|ref|YP_003791137.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus biovar anthracis str. CI]
gi|376265229|ref|YP_005117941.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus cereus F837/76]
gi|423552877|ref|ZP_17529204.1| hypothetical protein IGW_03508 [Bacillus cereus ISP3191]
gi|49331595|gb|AAT62241.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51977517|gb|AAU19067.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
E33L]
gi|118416087|gb|ABK84506.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis str. Al Hakam]
gi|195992046|gb|EDX56009.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
W]
gi|196022738|gb|EDX61420.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB108]
gi|218536733|gb|ACK89131.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH820]
gi|225787506|gb|ACO27723.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB102]
gi|228599990|gb|EEK57586.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BGSC 6E1]
gi|228662587|gb|EEL18185.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
95/8201]
gi|228814655|gb|EEM60915.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228833242|gb|EEM78807.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228845679|gb|EEM90706.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|300375095|gb|ADK03999.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
biovar anthracis str. CI]
gi|364511029|gb|AEW54428.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus cereus F837/76]
gi|401185490|gb|EJQ92584.1| hypothetical protein IGW_03508 [Bacillus cereus ISP3191]
Length = 349
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WTDLWNEKYKGHVTLLNDSREVLGMGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423609801|ref|ZP_17585662.1| hypothetical protein IIM_00516 [Bacillus cereus VD107]
gi|401250283|gb|EJR56584.1| hypothetical protein IIM_00516 [Bacillus cereus VD107]
Length = 349
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNDKYKGHVTLLNDSREVLGMGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|402553230|ref|YP_006594501.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus FRI-35]
gi|401794440|gb|AFQ08299.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus FRI-35]
Length = 349
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423618467|ref|ZP_17594301.1| hypothetical protein IIO_03793 [Bacillus cereus VD115]
gi|401254198|gb|EJR60434.1| hypothetical protein IIO_03793 [Bacillus cereus VD115]
Length = 349
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDAELKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|315644532|ref|ZP_07897664.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
vortex V453]
gi|315280039|gb|EFU43336.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
vortex V453]
Length = 350
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 26/183 (14%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
K W DLW PE G++ +++ RE+IG ++ A IA L L V
Sbjct: 151 KSWGDLWNPEYKGKVLLLDDNREMIGMALKKQGKSNSSKDEAEIIAASDELKTLLPNVLA 210
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
FD + + + WIA WS D +VA VVP+ GA++++D +AIP ++
Sbjct: 211 FDTDNIKQKMIQEEGWIATVWSGDAAFIAAENPDVAYVVPEEGATIFSDNYAIPKGAK-- 268
Query: 116 TKQIGGRVRGPF--PLI----HQWIEFCLQTARALPF-------NTRVKLPEELLKGKPS 162
K++ + P + +++I + +A+ F NT + L EE L+
Sbjct: 269 NKELAEKFINFMLEPEVSAKNYEFIGYSNPNTKAMEFHSEEYRANTMINLTEEELRRTEW 328
Query: 163 LDT 165
LD
Sbjct: 329 LDN 331
>gi|47566174|ref|ZP_00237202.1| PotD [Bacillus cereus G9241]
gi|47556727|gb|EAL15058.1| PotD [Bacillus cereus G9241]
Length = 349
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|42780475|ref|NP_977722.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus ATCC 10987]
gi|42736394|gb|AAS40330.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10987]
Length = 349
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|384179321|ref|YP_005565083.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324325405|gb|ADY20665.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 349
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229074647|ref|ZP_04207670.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-18]
gi|229095872|ref|ZP_04226851.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-29]
gi|229101987|ref|ZP_04232701.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-28]
gi|229114826|ref|ZP_04244240.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-3]
gi|407703754|ref|YP_006827339.1| glycolate oxidase [Bacillus thuringiensis MC28]
gi|423380811|ref|ZP_17358095.1| hypothetical protein IC9_04164 [Bacillus cereus BAG1O-2]
gi|423443843|ref|ZP_17420749.1| hypothetical protein IEA_04173 [Bacillus cereus BAG4X2-1]
gi|423445901|ref|ZP_17422780.1| hypothetical protein IEC_00509 [Bacillus cereus BAG5O-1]
gi|423466935|ref|ZP_17443703.1| hypothetical protein IEK_04122 [Bacillus cereus BAG6O-1]
gi|423536331|ref|ZP_17512749.1| hypothetical protein IGI_04163 [Bacillus cereus HuB2-9]
gi|423538424|ref|ZP_17514815.1| hypothetical protein IGK_00516 [Bacillus cereus HuB4-10]
gi|423544663|ref|ZP_17521021.1| hypothetical protein IGO_01098 [Bacillus cereus HuB5-5]
gi|423625631|ref|ZP_17601409.1| hypothetical protein IK3_04229 [Bacillus cereus VD148]
gi|228668891|gb|EEL24319.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-3]
gi|228681570|gb|EEL35733.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-28]
gi|228687705|gb|EEL41604.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-29]
gi|228708529|gb|EEL60679.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-18]
gi|401132994|gb|EJQ40627.1| hypothetical protein IEC_00509 [Bacillus cereus BAG5O-1]
gi|401177008|gb|EJQ84200.1| hypothetical protein IGK_00516 [Bacillus cereus HuB4-10]
gi|401183638|gb|EJQ90750.1| hypothetical protein IGO_01098 [Bacillus cereus HuB5-5]
gi|401254469|gb|EJR60698.1| hypothetical protein IK3_04229 [Bacillus cereus VD148]
gi|401631563|gb|EJS49360.1| hypothetical protein IC9_04164 [Bacillus cereus BAG1O-2]
gi|402411975|gb|EJV44337.1| hypothetical protein IEA_04173 [Bacillus cereus BAG4X2-1]
gi|402414739|gb|EJV47066.1| hypothetical protein IEK_04122 [Bacillus cereus BAG6O-1]
gi|402461168|gb|EJV92882.1| hypothetical protein IGI_04163 [Bacillus cereus HuB2-9]
gi|407381439|gb|AFU11940.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis MC28]
Length = 349
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDAELKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229029058|ref|ZP_04185157.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1271]
gi|228732338|gb|EEL83221.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1271]
Length = 349
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|206977547|ref|ZP_03238441.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
H3081.97]
gi|217958863|ref|YP_002337411.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH187]
gi|222095022|ref|YP_002529082.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus Q1]
gi|375283358|ref|YP_005103796.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus NC7401]
gi|423354129|ref|ZP_17331755.1| hypothetical protein IAU_02204 [Bacillus cereus IS075]
gi|423371369|ref|ZP_17348709.1| hypothetical protein IC5_00425 [Bacillus cereus AND1407]
gi|423569696|ref|ZP_17545942.1| hypothetical protein II7_02918 [Bacillus cereus MSX-A12]
gi|206744265|gb|EDZ55678.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
H3081.97]
gi|217065950|gb|ACJ80200.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH187]
gi|221239080|gb|ACM11790.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Q1]
gi|358351884|dbj|BAL17056.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NC7401]
gi|401087330|gb|EJP95534.1| hypothetical protein IAU_02204 [Bacillus cereus IS075]
gi|401103195|gb|EJQ11180.1| hypothetical protein IC5_00425 [Bacillus cereus AND1407]
gi|401205915|gb|EJR12713.1| hypothetical protein II7_02918 [Bacillus cereus MSX-A12]
Length = 349
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|428226280|ref|YP_007110377.1| extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
gi|427986181|gb|AFY67325.1| extracellular solute-binding protein family 1 [Geitlerinema sp. PCC
7407]
Length = 376
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 7 KDWKDLW--LPELAGRISMVNSPREVIGT-----------QAAAGRIAVQQNLALLGNQV 53
+DW+ LW P L+ RI+++N REV+G + A A + L L +
Sbjct: 176 EDWRYLWDNQPMLSRRITLLNDMREVMGATLRMLGYSYNAEDPAQLEAAYEELVKLKPAI 235
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP-AAS 112
F + GD+ IA+ +SSD + ++ ++P+SG+SLW D IP +A
Sbjct: 236 ASFTSDAWRSQIITGDLLIAMSYSSDAQLVTEENPDLEYLIPQSGSSLWVDTMVIPKSAP 295
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTA------RALPFNTRVKLPEELLKGKPSLDTK 166
+E + W+ F +Q + + L F + +LL + D
Sbjct: 296 NVEAA-------------YAWLNFMMQPSVLVDLCQRLGFTPPSRAAADLLPTELRNDPG 342
Query: 167 LIAGVPPAEILARCEFLEPLSEA 189
L PP ++LARCE + P+S A
Sbjct: 343 LF---PPDQVLARCEGIAPVSGA 362
>gi|423576894|ref|ZP_17553013.1| hypothetical protein II9_04115 [Bacillus cereus MSX-D12]
gi|423606908|ref|ZP_17582801.1| hypothetical protein IIK_03489 [Bacillus cereus VD102]
gi|401206644|gb|EJR13432.1| hypothetical protein II9_04115 [Bacillus cereus MSX-D12]
gi|401241098|gb|EJR47490.1| hypothetical protein IIK_03489 [Bacillus cereus VD102]
Length = 349
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229154954|ref|ZP_04283068.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 4342]
gi|228628512|gb|EEK85225.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 4342]
Length = 349
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|227825012|ref|ZP_03989844.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|352683976|ref|YP_004895960.1| hypothetical protein Acin_0580 [Acidaminococcus intestini RyC-MR95]
gi|226905511|gb|EEH91429.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|350278630|gb|AEQ21820.1| conserved hypothetical protein [Acidaminococcus intestini RyC-MR95]
Length = 353
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG----------TQAAAGRIAVQ-QNLALLGNQVRLFD 57
W+DLW P GR+ ++N REVIG G+I + ++L L V +D
Sbjct: 156 WQDLWNPVYKGRVILLNDSREVIGMALKKHGFSNNATDPGQIDIAFKDLKTLAPNVLAYD 215
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ F + WI + WS D +V V+PK G ++WAD AIP ++
Sbjct: 216 TDSIKQKFIAEEAWIGMMWSGDAHFVHNDNPDVGFVIPKEGTTVWADTLAIPKGAK 271
>gi|83645024|ref|YP_433459.1| spermidine/putrescine-binding periplasmic protein [Hahella
chejuensis KCTC 2396]
gi|83633067|gb|ABC29034.1| Spermidine/putrescine-binding periplasmic protein [Hahella
chejuensis KCTC 2396]
Length = 349
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 42/209 (20%)
Query: 9 WKDLWLPELAGRISMVNSPREVI----------GTQAAAGRIA-VQQNLALLGNQVRLFD 57
WKDLW P+ G + + + REV G I + L L V +++
Sbjct: 152 WKDLWNPKWKGSLLLTDDVREVFHMALKINGHSGNSTDPAEIKQAYELLKTLTPNVLVYN 211
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ + GDV + + W+ +V+ A + ++ + PK GA+ W D +AIPA + +
Sbjct: 212 SDAPREPYMAGDVNLGMIWNGEVIQAQQENPDIQYIYPKEGAAFWVDSFAIPAGAENKEN 271
Query: 118 QIGGRVRGPFPLIHQWIEFCLQ----------TARALPFNTRVKLPEELLKGKPSLDTKL 167
+ ++I+F LQ A P + + L +E L+ P++
Sbjct: 272 AL------------KFIDFMLQPEIAKRCVEFIGYATPNKSALDLLDEKLRNNPTI---- 315
Query: 168 IAGVPPAEILARCEFLEPLSEAT--LSDY 194
PPAE++ + +F + + EA +DY
Sbjct: 316 ---FPPAEVIQKGDFQQDVGEAMEIYNDY 341
>gi|72160685|ref|YP_288342.1| polyamine-binding lipoprotein [Thermobifida fusca YX]
gi|71914417|gb|AAZ54319.1| putative polyamine-binding lipoprotein [Thermobifida fusca YX]
Length = 412
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 22/122 (18%)
Query: 10 KDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQNLALLGNQ 52
KDLW PE GR+ M+ P+E+ +AAA + Q++ +
Sbjct: 197 KDLWDPEFKGRVGMMRDPQEISNFALLYNGVAPEDSTPEDWEAAAEVLKKQRDDGI---- 252
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLWAIPAA 111
VR + Y++ GD+WI + WS D+ + +N+ V+P+ GA+LW D IP
Sbjct: 253 VRAYYEQDYIQPLTNGDIWITMAWSGDIYQVNAEEGTNLKFVIPEEGATLWTDNLTIPIT 312
Query: 112 SR 113
++
Sbjct: 313 AQ 314
>gi|357385895|ref|YP_004900619.1| putrescine ABC transporter putrescine-binding protein PotF
[Pelagibacterium halotolerans B2]
gi|351594532|gb|AEQ52869.1| putrescine ABC transporter putrescine-binding protein PotF
[Pelagibacterium halotolerans B2]
Length = 363
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 23/133 (17%)
Query: 1 MNENG-FKDWKDLWLPELAGR-----ISMVNSPREVIG-----------TQAAAGRIAVQ 43
+ E+G + W L+ PE+A + IS++++P E++ ++ A +
Sbjct: 145 LGEDGPLQSWDLLFDPEIAAQLADCGISVLDAPVEMVAAALNYLGLDPNSETPEDLEAAE 204
Query: 44 QNLALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKS 97
Q +A + +R+F+ + Y+ G++ +AVG+S DV A R + +A V+P+
Sbjct: 205 QLIASIRPHIRMFNSSQYISDLANGEICLAVGYSGDVFIAADRAAEAGQGVEIAYVIPEE 264
Query: 98 GASLWADLWAIPA 110
GASLW D+ AIPA
Sbjct: 265 GASLWFDMMAIPA 277
>gi|414075947|ref|YP_006995265.1| ABC-type spermidine/putrescine transport system periplasmic binding
component [Anabaena sp. 90]
gi|413969363|gb|AFW93452.1| ABC-type spermidine/putrescine transport system periplasmic binding
component [Anabaena sp. 90]
Length = 360
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 28/201 (13%)
Query: 4 NGFKDWKDLWL--PELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLG 50
N +DW+ LW +L R +++N REV+G +Q Q L +L
Sbjct: 158 NAPEDWEYLWQNQDQLNKRFTLLNDVREVMGATLRMLGYSYNSQNENEVKQAYQKLQILK 217
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
+ FD + GD+ +A+ +S+D + + + V+P+SG+SLW D IP
Sbjct: 218 PAIAAFDTDAWQNKILAGDLAVAMCYSADAVKICQENPKLKFVIPRSGSSLWTDTIVIPK 277
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG 170
++ I G + WI LQ A + R+ + G L +
Sbjct: 278 SN----PNIAG--------AYAWINLILQPEVAAKISERLYISTPSRAGFEQLPKAIQEN 325
Query: 171 V---PPAEILARCEFLEPLSE 188
PP +LA+CE L PL +
Sbjct: 326 TNLFPPQSLLAKCERLTPLGK 346
>gi|423588228|ref|ZP_17564315.1| hypothetical protein IIE_03640 [Bacillus cereus VD045]
gi|401226736|gb|EJR33270.1| hypothetical protein IIE_03640 [Bacillus cereus VD045]
Length = 349
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ A +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGVGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++W D AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWTDTLAIPKGAK 266
>gi|258646316|ref|ZP_05733785.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister
invisus DSM 15470]
gi|260403707|gb|EEW97254.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister
invisus DSM 15470]
Length = 353
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQVRLFD 57
W DLW E GR+ ++N REVIG +V L L + FD
Sbjct: 156 WNDLWKDEYKGRVILLNDNREVIGMGLKKNGHSVNSKDPNEVTQAVDQLRKLTPNLLAFD 215
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ F + WI WS D K ++A ++PK GA +WAD +AIP ++
Sbjct: 216 TDTIKQKFIAEEAWIGTMWSGDASFTHKDNPDIAFIIPKEGAVIWADTFAIPKGAK 271
>gi|374853292|dbj|BAL56204.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
gi|374857069|dbj|BAL59922.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
Length = 352
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 30/199 (15%)
Query: 9 WKDLWLPE----LAGRISMVNSPREVIG----------TQAAAGRIAVQQNLALLGN-QV 53
W DL+ P+ R+SM++ PRE IG ++ +NL L+ +
Sbjct: 152 WADLFEPDRLERYKNRVSMLDDPREAIGAALKYLGYSVNSTDPQQLEAAKNLLLVQKPYL 211
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+D Y GD+ +A GWS + A SN+ V+P+ G +WAD AIP +S+
Sbjct: 212 ARYDSETYDDFLLTGDLVLAHGWSGEFAKAHVENSNIRYVIPREGGVIWADNLAIPKSSQ 271
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AG 170
R+ L H +I+F L+ ++ P + +++ A
Sbjct: 272 --------RID----LAHTFIDFLLRPTINAKIVNFLRYPSTNEAATAHILPEIVNDPAI 319
Query: 171 VPPAEILARCEFLEPLSEA 189
PP EIL + E++ + +A
Sbjct: 320 YPPEEILEKLEWIRDVGDA 338
>gi|229172027|ref|ZP_04299592.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
MM3]
gi|423404099|ref|ZP_17381272.1| hypothetical protein ICW_04497 [Bacillus cereus BAG2X1-2]
gi|423475271|ref|ZP_17451986.1| hypothetical protein IEO_00729 [Bacillus cereus BAG6X1-1]
gi|228611370|gb|EEK68627.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
MM3]
gi|401647306|gb|EJS64915.1| hypothetical protein ICW_04497 [Bacillus cereus BAG2X1-2]
gi|402436373|gb|EJV68404.1| hypothetical protein IEO_00729 [Bacillus cereus BAG6X1-1]
Length = 349
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + G ++++N REV+G T+ +L L + FD
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFSNSTKDDTQLKTAADDLKKLLPNLLAFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + F D WI WS D K +V VVPK G ++WAD AIP ++
Sbjct: 211 TDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|332705363|ref|ZP_08425441.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
gi|332355723|gb|EGJ35185.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
Length = 374
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 88/211 (41%), Gaps = 37/211 (17%)
Query: 7 KDWKDLWLPE--LAGRISMVNSPREVIG-TQAAAGRIAVQQN----------LALLGNQV 53
+DW LW + L+ R++++N REV+G T G N L L +
Sbjct: 174 EDWSYLWQDKDKLSRRMTLLNDVREVMGATLKMLGYSYNSTNPQEIKKAYETLVDLKPSI 233
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP-AAS 112
F + GD+WIA+ +SSD + ++ V+PKSG+SLW D AIP A
Sbjct: 234 ASFSSDAWRSQILSGDLWIAMCYSSDAAEIMAENPDLQYVLPKSGSSLWTDTLAIPKTAP 293
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
LE + WI F L Q L F T + +LL + D
Sbjct: 294 NLEGA-------------YAWINFMLEADVAAQICERLSFATPNQKAFKLLSREIQEDQS 340
Query: 167 LIAGVPPAEILARCEFLEPLSEAT-LSDYEW 196
L P + L RCE L P+ E + L D W
Sbjct: 341 LF---PESSALERCEGLAPVDEVSELYDRYW 368
>gi|427730105|ref|YP_007076342.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
gi|427366024|gb|AFY48745.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
Length = 360
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 34/201 (16%)
Query: 7 KDWKDLWLPE--LAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQV 53
+DW LW + L R++++N REV+G +Q + L L +
Sbjct: 160 EDWNYLWQNQALLNKRMTLLNDVREVMGAVLRMLGYSYNSQNENEIKQAYEKLTELKPAI 219
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
FD + GD+ +A+ +S+D + K + V+P+SG+SLW D IP ++
Sbjct: 220 AAFDTDAWQNQMLAGDLVLAMCYSADAIRVSKENPKLKYVIPRSGSSLWTDTMVIPKSA- 278
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE------ELLKGKPSLDTKL 167
I G + WI F LQ A + R+K+ ELL + + L
Sbjct: 279 ---PNIDG--------AYAWINFILQPEIAATTSQRLKIATPNSAGFELLPNQIKNNDDL 327
Query: 168 IAGVPPAEILARCEFLEPLSE 188
PP +L +CE + PL +
Sbjct: 328 F---PPNALLEKCERISPLGQ 345
>gi|399054172|ref|ZP_10742802.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. CF112]
gi|433544690|ref|ZP_20501067.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus agri BAB-2500]
gi|398048070|gb|EJL40562.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. CF112]
gi|432184038|gb|ELK41562.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus agri BAB-2500]
Length = 350
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG--------TQAAAGRIAVQQNLALLGNQ---VRLFD 57
W DLW GR+ M+N PREV+G + + + ++++ A L V FD
Sbjct: 153 WSDLWNEAYKGRVIMLNDPREVMGMALIKNGFSNSTTNKDELEKSFADLKKMLPGVMAFD 212
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + + WI WS D + +V V+PK GA++WAD AIP ++
Sbjct: 213 TDNIKQKMIAEEAWIGTVWSGDAAIINGQNPDVEYVIPKEGATIWADTLAIPKGAK 268
>gi|226314011|ref|YP_002773907.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus brevis NBRC 100599]
gi|226096961|dbj|BAH45403.1| spermidine/putrescine ABC transporter substrate binding protein
[Brevibacillus brevis NBRC 100599]
Length = 351
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG--------TQAAAGRIAVQQNLALLGN---QVRLFD 57
W DLW GR+ M+N PREV+G + + + ++++ A L V FD
Sbjct: 154 WNDLWNEAYKGRVIMLNDPREVMGMALIKNGFSNSTTNKEELEKSFADLKKVVPNVVAFD 213
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + + WI WS D + +V V+PK GA++WAD AIP ++
Sbjct: 214 TDNIKQKMIAEEAWIGTVWSGDAAFIHAQNPDVEYVIPKEGATIWADTMAIPKGAK 269
>gi|427723684|ref|YP_007070961.1| extracellular solute-binding protein [Leptolyngbya sp. PCC 7376]
gi|427355404|gb|AFY38127.1| extracellular solute-binding protein family 1 [Leptolyngbya sp. PCC
7376]
Length = 386
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 46/206 (22%)
Query: 8 DWKDLW--LPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQV 53
DW LW +L R++++N REV+G T+ A + A ++ L L +
Sbjct: 186 DWNYLWDNADKLQRRMTLLNDVREVLGASLKSLGYSYNSTEEAQVKAAYER-LVELRPAI 244
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F+ + GD+ +A+ +SSD + N A VVP SG+S+WAD IP
Sbjct: 245 ASFNSDAWRTQILSGDLLVAMCYSSDANEITEEDDNFAYVVPSSGSSVWADTLVIP---- 300
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVK-----------LPEELLKGKPS 162
R P + W+ F ++ + R+ LPE+ ++ P+
Sbjct: 301 --------RTAPNVPGAYAWMSFMMRAQVSAEITQRLSFATPNRPGYELLPED-VRTNPN 351
Query: 163 LDTKLIAGVPPAEILARCEFLEPLSE 188
L P +E + RCE L+PL E
Sbjct: 352 L-------FPSSETIDRCEGLKPLGE 370
>gi|406671762|ref|ZP_11079001.1| hypothetical protein HMPREF9706_01261 [Facklamia hominis CCUG
36813]
gi|405581012|gb|EKB55071.1| hypothetical protein HMPREF9706_01261 [Facklamia hominis CCUG
36813]
Length = 357
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 40/215 (18%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRI-AV 42
++E + W DLW PEL G++ M++ REV+G Q +A ++ +
Sbjct: 150 IDEGDIQSWDDLWKPELRGKVMMIDGAREVLGIGLQSQGWSLNETDSQRLQKSADKMKTL 209
Query: 43 QQNL-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASL 101
N+ ALL ++++++ + + IAV +S + A++ N+ +VP+ G+++
Sbjct: 210 MPNIQALLADEIKMY--------LAMEESPIAVTYSGEAAMAMEENENLCYLVPQEGSNI 261
Query: 102 WADLWAIPAASRLETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKG 159
W D AIP ++ +G L++ + E Q A + ++T K + LL
Sbjct: 262 WFDNLAIPKGAK--------NKKGALALMNFLMRPEVAAQNAEYIGYSTPNKAAKALLDP 313
Query: 160 KPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDY 194
+ + D A P + L E L + L +Y
Sbjct: 314 EITSDQ---AFYPDNDTLDHLEVYRNLGKEKLIEY 345
>gi|424513096|emb|CCO66680.1| periplasmic polyamine-binding protein of ABC transporter
[Bathycoccus prasinos]
Length = 572
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 33/218 (15%)
Query: 8 DWKDLWLPELAGR--ISMVNSPREVIGTQAAAGRIAVQQNLALLGNQ------------- 52
DW D++ P + + ++PREV+ G N + N+
Sbjct: 352 DWTDVFDPRFGNKTFVGCADAPREVLSAALKMGDPRNTINPKTIDNERSQRDALRRLRAK 411
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
+++ D YL+ GD+ +A G S DVL +R S V V P SG +L D++ P +
Sbjct: 412 IKVSDDETYLRALQNGDISVAFGGSDDVLALCRRSSLVKPVFPPSGTALHCDVFVRPVLN 471
Query: 113 R--LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKL----------PEELLKGK 160
T + P I W++F L + R N R L + + G+
Sbjct: 472 EGGGYTSSVPHSAPSSSPGIDAWLDFMLDSGR---INERGGLRSGLNPIQFDGDRIYGGR 528
Query: 161 PSLDT--KLIAGVPPAEIL-ARCEFLEPLSEATLSDYE 195
S D + G P ++ + EF+ PLS+A + YE
Sbjct: 529 SSQDDVGDIFKGWLPDDMAWSNSEFVLPLSDAAIRAYE 566
>gi|28900222|ref|NP_799877.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|260361653|ref|ZP_05774680.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus K5030]
gi|260880784|ref|ZP_05893139.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AN-5034]
gi|260896506|ref|ZP_05905002.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus Peru-466]
gi|260899480|ref|ZP_05907875.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ4037]
gi|28808533|dbj|BAC61710.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|308089236|gb|EFO38931.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus Peru-466]
gi|308092107|gb|EFO41802.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AN-5034]
gi|308109246|gb|EFO46786.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ4037]
gi|308112748|gb|EFO50288.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus K5030]
Length = 344
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 83/209 (39%), Gaps = 42/209 (20%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + ++ +++ R+V G T+ A +L L N V L++
Sbjct: 147 WADLWESQYEQQVMLIDDVRDVFGMALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYN 206
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+ + + W+ + M + V+P+ GA LW D + IP+ S+ +T
Sbjct: 207 SDAPQVPYVSGETSVGMQWNGNAFQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNKT- 265
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARALPFNT-----------RVKLPEELLKGKPSLDTK 166
L H++I F Q+ T R KLPEEL +
Sbjct: 266 -----------LAHKFINFMYQSENQAEIVTSLGYASATNAGRDKLPEELKNNRTIF--- 311
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYE 195
P +E + + EF+ + TL+ YE
Sbjct: 312 -----PSSEDMKKGEFINDVGAETLAIYE 335
>gi|113476392|ref|YP_722453.1| extracellular solute-binding protein [Trichodesmium erythraeum
IMS101]
gi|110167440|gb|ABG51980.1| extracellular solute-binding protein, family 1 [Trichodesmium
erythraeum IMS101]
Length = 353
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 83/201 (41%), Gaps = 38/201 (18%)
Query: 7 KDWKDLWLPE--LAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQ 52
DWK LW + + R+++VN REVIG T + A Q+ L L
Sbjct: 153 NDWKYLWENQDLVLKRMTLVNDVREVIGCALRKLGYSYNSTNVDNIKEAYQE-LLTLKPA 211
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
+ F + + D+ IA+ +SSD ++ + P+SG+SLW D IP
Sbjct: 212 IASFTTDGWRSQILVEDLLIAMCYSSDAAEIKPENEDLEYITPRSGSSLWTDTLVIPK-- 269
Query: 113 RLETKQIGGRVRGPFPL-IHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDT 165
P P +QWI F LQ A L F T + ++L + D+
Sbjct: 270 -----------NAPNPEGAYQWINFMLQPDVAAQIVERLSFTTASRKAYQILPEELKEDS 318
Query: 166 KLIAGVPPAEILARCEFLEPL 186
L PP +L +CE L PL
Sbjct: 319 TLF---PPESVLEKCESLAPL 336
>gi|398816806|ref|ZP_10575447.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. BC25]
gi|398031945|gb|EJL25313.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. BC25]
Length = 351
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG--------TQAAAGRIAVQQNLALLGN---QVRLFD 57
W DLW GR+ M+N PREV+G + + ++++ A L V FD
Sbjct: 154 WNDLWNEAYKGRVIMLNDPREVMGMALIKNGFSNSTTNTEELEKSFADLKKVVPNVVAFD 213
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + + WI WS D + +V V+PK GA++WAD AIP ++
Sbjct: 214 TDNIKQKMIAEEAWIGTVWSGDAAFIHAQNPDVEYVIPKEGATIWADTLAIPKGAK 269
>gi|119510563|ref|ZP_01629694.1| extracellular solute-binding protein, family 1 [Nodularia spumigena
CCY9414]
gi|119464830|gb|EAW45736.1| extracellular solute-binding protein, family 1 [Nodularia spumigena
CCY9414]
Length = 360
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 28/198 (14%)
Query: 7 KDWKDLWLPE--LAGRISMVNSPREVIG--------TQAAAGRIAVQQ---NLALLGNQV 53
+DW LW + L RI+++N REV+G + + +QQ L L +
Sbjct: 160 QDWDYLWQNQELLNRRITLLNDVREVMGGVLRMLGYSYNSQDENQIQQAYEKLVELKPAI 219
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F+ + GD+ +A+ +S+D + + V+P+SG+SLW D IP ++
Sbjct: 220 ASFNTDAWQNQLLAGDLTLAMCYSADAIRITQENPQFKYVIPRSGSSLWTDTIVIPKSA- 278
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGV-- 171
+ G + WI + LQ A + R+ L + G L +
Sbjct: 279 -------PNLDGAYA----WINYMLQPDIAASISQRLSLATPNMAGFEQLPQNIQNNANW 327
Query: 172 -PPAEILARCEFLEPLSE 188
PP E+L +CE + PL +
Sbjct: 328 FPPQELLEKCERIAPLGD 345
>gi|403383481|ref|ZP_10925538.1| spermidine/putrescine-binding periplasmic protein [Kurthia sp.
JC30]
Length = 358
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 32/209 (15%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQV--RLFDRTHYLK 63
F W LW P L G++ +V+S REV+G + +++ + N+ +L D + +K
Sbjct: 156 FSSWDQLWDPSLKGKVLLVDSAREVMGMSLNSMNLSLNSKDSNELNKATDKLIDLSPNVK 215
Query: 64 -VFGI--------GDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
V G GD +A+ WS + ++ VPK G++LW D IP S+
Sbjct: 216 AVIGDEVTQLMVNGDASVALTWSGQAADMMYDNEDLTYAVPKEGSNLWFDNMVIPKTSK- 274
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
V G H+++ F L Q A + ++T K +LL + + D +
Sbjct: 275 -------NVEGA----HKFMNFMLDPENAAQNADYVGYSTPNKAALDLLDKEVTSDERY- 322
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYEWL 197
P AE+ + L + + +Y L
Sbjct: 323 --YPSAEVRKNLHVYQNLGKEKIGEYNEL 349
>gi|333367327|ref|ZP_08459603.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Psychrobacter sp.
1501(2011)]
gi|332978832|gb|EGK15515.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Psychrobacter sp.
1501(2011)]
Length = 386
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 41/209 (19%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W DLWLP+ GR+ ++N R+V TQ A + LA L VR F+
Sbjct: 187 WDDLWLPQYKGRVMLMNDLRDVFSMSLLTLGYPTSTQDPNHIKAAYEKLATLMPNVRTFN 246
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKR-MSNVAVVVPKSGASLWADLWAIPA-ASRLE 115
F G+ ++ + W+ +V+ A + M + V PK G +W D AIP A LE
Sbjct: 247 SDAPRMPFMEGETYLGLAWNGEVIMAQDQGMPELDFVYPKEGVIMWMDNMAIPKNAKNLE 306
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG----- 170
+ +I+F ++ P N+ + + EE+ G PS + +
Sbjct: 307 NA-------------YTFIDFLMR-----PENSAI-ISEEIGYGSPSDAARALMPPKMAN 347
Query: 171 ----VPPAEILARCEFLEPLSEATLSDYE 195
PPA+ + F + + T++ Y+
Sbjct: 348 NEIIYPPADKMGHALFRRDVGDKTMALYQ 376
>gi|261495061|ref|ZP_05991528.1| Lpp38 [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261309303|gb|EEY10539.1| Lpp38 [Mannheimia haemolytica serotype A2 str. OVINE]
Length = 364
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 82/199 (41%), Gaps = 28/199 (14%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQV 53
F W DLW PE AG++ +++ REV T + A ++ L L V
Sbjct: 164 FTSWGDLWKPEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPDEIKEAFEE-LKKLRPNV 222
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F + F G+V + W+ V A K + V +V PK G LW D AIPA ++
Sbjct: 223 LSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKENAPVDMVFPKEGPVLWVDTLAIPANAK 282
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE---ELLKGKPSLDTKLIAG 170
+ H+ I + L A + P E LK P T+ IA
Sbjct: 283 NKEN------------AHKLINYLLSAKIAEKLTLAIGYPTSNVEALKVLPKEITEDIAI 330
Query: 171 VPPAEILARCEFLEPLSEA 189
P AE+L + ++ + + +A
Sbjct: 331 YPSAEVLQKSQWQDDVGDA 349
>gi|262403152|ref|ZP_06079712.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC586]
gi|262350651|gb|EEY99784.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC586]
Length = 344
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 42/214 (19%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQ 52
NG W DLW + ++ +++ R+V G ++ ++L L N
Sbjct: 142 NGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEDEIKKAYESLVALKNN 201
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V L++ + G+ + + W+ + M + V+P+ GA LW D + IP+ S
Sbjct: 202 VLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS 261
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVK-----LPEELLKGKP 161
+ PL H++I F Q ++L + + K LP E L+ P
Sbjct: 262 K------------NIPLAHKFINFMYQPENQAEIVKSLGYASATKGGRALLPAE-LRDNP 308
Query: 162 SLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
++ P E + + EF+ + TL+ YE
Sbjct: 309 TI-------FPSEEDMKKGEFINDVGPETLAIYE 335
>gi|269967211|ref|ZP_06181276.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 40B]
gi|269828201|gb|EEZ82470.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 40B]
Length = 344
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 84/217 (38%), Gaps = 42/217 (19%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALL 49
M E K W DLW + ++ +++ R+V G +V +L L
Sbjct: 139 MVEQPVKKWADLWESQYEQQVMLIDDVRDVFGMALKKNGHSVNTKDEAEIEQAFDSLVAL 198
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
N V L++ + G+ + + W+ + M + V+P+ GA LW D + IP
Sbjct: 199 KNNVLLYNSDAPQVPYVSGETSVGMQWNGNAFQGQVEMPELKFVMPEEGAVLWMDNFTIP 258
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNT-----------RVKLPEELLK 158
+ S+ + L H++I F Q+ T R KLPEEL
Sbjct: 259 SGSKNKA------------LAHKFINFMYQSENQAEIVTSLGYASATNAGRDKLPEELKN 306
Query: 159 GKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
+ P +E + + EF+ + TL+ YE
Sbjct: 307 NRTIF--------PSSEDMKKGEFINDVGAETLAIYE 335
>gi|257454396|ref|ZP_05619658.1| spermidine/putrescine-binding periplasmic protein [Enhydrobacter
aerosaccus SK60]
gi|257448162|gb|EEV23143.1| spermidine/putrescine-binding periplasmic protein [Enhydrobacter
aerosaccus SK60]
Length = 380
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW PE GR+ ++N R+V T+ + L L VR F+
Sbjct: 181 WNDLWKPEYEGRVMLMNDIRDVFTMSLLTLGYNGSTKNPEAIKQAYEKLTKLMPNVRTFN 240
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKR-MSNVAVVVPKSGASLWADLWAIPAASRLET 116
F G+ ++ + W+ +V+ A + M + V PK GA +W D IP ++
Sbjct: 241 SDAPRMPFMEGETYLGLAWNGEVIMAQDQGMPELDFVYPKEGAIMWMDNMVIPKNAKNND 300
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKL--PEELLKGK--PSLDTKLIAGVP 172
H++I+F L+ A + + P E K + P L I P
Sbjct: 301 NA------------HKFIDFILRPKYAAMISEEIGYGSPNEAAKKEMPPELANNPIV-YP 347
Query: 173 PAEILARCEFLEPLSEATLSDYE 195
PA++L F E + + ++ Y+
Sbjct: 348 PADLLKHAMFREDVGDEIMALYQ 370
>gi|427716541|ref|YP_007064535.1| extracellular solute-binding protein [Calothrix sp. PCC 7507]
gi|427348977|gb|AFY31701.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
7507]
Length = 361
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 28/202 (13%)
Query: 3 ENGFKDWKDLWL--PELAGRISMVNSPREVIG--------TQAAAGRIAVQQ---NLALL 49
+N +DW LW +L R++++N REV+G + + ++Q L +L
Sbjct: 157 KNAPEDWDYLWQNQTQLHKRMTLLNDVREVMGATLRMLGYSYNSKDENQIKQAYEKLKVL 216
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
+ FD + GD+ +A+ +S+D + K ++ V+P+SG+SLW D IP
Sbjct: 217 KPAIAAFDTDAWQNQILAGDLVLAMCYSADAIRVSKENPHLKYVIPRSGSSLWTDTIIIP 276
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIA 169
+ + G + WI F LQ A + R+ + G L ++
Sbjct: 277 --------KTAPNLDGAYA----WINFILQPEVAAQVSQRLSVATPNRSGFEQLPKQIQN 324
Query: 170 GV---PPAEILARCEFLEPLSE 188
PP I+ +CE + PL +
Sbjct: 325 NTNLFPPESIVEKCERITPLGK 346
>gi|323142870|ref|ZP_08077582.1| putative putrescine-binding periplasmic protein [Succinatimonas
hippei YIT 12066]
gi|322417412|gb|EFY08034.1| putative putrescine-binding periplasmic protein [Succinatimonas
hippei YIT 12066]
Length = 377
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 31/152 (20%)
Query: 21 ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
I++++SP EVI ++ A+ ++ L L + VR F + Y+ G+
Sbjct: 173 IAVLDSPIEVISAAMHYLGKDPNSEKASDYEEAEKLLTALASNVRYFHSSRYINELASGE 232
Query: 70 VWIAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRV 123
+ A+G+S D+L A KR + V PK G+ LW D W IPA +
Sbjct: 233 ICAAIGYSGDILQADKRAIQANRDYRIKYVFPKEGSLLWFDCWTIPAGAE--------NY 284
Query: 124 RGPFPLIHQWIEFCL--QTARALPFNTRVKLP 153
+G H W + L Q A+++ R LP
Sbjct: 285 KGA----HAWFNYLLDPQVAKSVSNEIRYILP 312
>gi|15602126|ref|NP_245198.1| protein PotD [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720490|gb|AAK02345.1| PotD [Pasteurella multocida subsp. multocida str. Pm70]
Length = 358
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 81/200 (40%), Gaps = 28/200 (14%)
Query: 5 GFKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQ 52
F W DLW PE G++ +++ REV T A + A ++ L L N
Sbjct: 157 NFTAWGDLWKPEFKGKVQLLDDAREVFNIALLKLGQDPNTTDPAIIKQAYEELLKLRPN- 215
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V F+ + F G+V + W+ V A K + + +V PK G LW D AIPA S
Sbjct: 216 VLSFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLNMVFPKEGPVLWVDTLAIPANS 275
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKG---KPSLDTKLIA 169
K G H+ I + L A + P LK PS T+ A
Sbjct: 276 ----KNPDGA--------HKLINYLLSAKVAAQLAEEIGYPTSNLKALELLPSEVTQDPA 323
Query: 170 GVPPAEILARCEFLEPLSEA 189
P AEIL + + + +A
Sbjct: 324 VYPTAEILQNSHWQDDVGDA 343
>gi|329927991|ref|ZP_08281995.1| putative spermidine/putrescine ABC transporter [Paenibacillus sp.
HGF5]
gi|328938095|gb|EGG34492.1| putative spermidine/putrescine ABC transporter [Paenibacillus sp.
HGF5]
Length = 350
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W+DLW PE G++ +++ RE+IG + A A L L V FD
Sbjct: 153 WEDLWNPEYKGKVLLLDDNREMIGMALKKQGKSNSSTDEAEITAASDELKTLLPNVLAFD 212
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ + + WIA WS D +VA VVP+ GA++++D +AIP ++ K
Sbjct: 213 TDNIKQKMIQEEGWIATVWSGDAAFIAAENPDVAYVVPEEGATIFSDNYAIPKGAK--NK 270
Query: 118 QIGGRVRGPF--PLI----HQWIEFCLQTARALPF-------NTRVKLPEELL 157
++ + P + +++I + +A+ F NT + L EE L
Sbjct: 271 ELAEKFINFMMEPEVSAKNYEFIGYSNPNTKAMEFHSEEYRANTMINLTEEEL 323
>gi|209525279|ref|ZP_03273821.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|423065114|ref|ZP_17053904.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
gi|209494294|gb|EDZ94607.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|406713407|gb|EKD08577.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
Length = 363
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 50/210 (23%)
Query: 4 NGFKDWKDLWL--PELAGRISMVNSPREVIGTQAAAGRIAVQQN-------------LAL 48
N +DW+DLW +L+ R++++N REV+G A+ R+ N L
Sbjct: 159 NSPEDWEDLWTYQDQLSRRLTLLNDVREVMG--ASLRRLGYSYNSTNPREINQAYQELVK 216
Query: 49 LGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 108
L + F + +GD+ +A+ +SSD + ++ + P SG+SLW D I
Sbjct: 217 LRGAIASFTTDAWRPQMIVGDLLLAMCYSSDAAEVMPENEDLEYITPVSGSSLWIDTLVI 276
Query: 109 PAASRLETKQIGGRVRGPFPL-IHQWIEFCL------QTARALPFNT-----RVKLPEEL 156
P ++ P P +QWI F L Q L F T +LP+E
Sbjct: 277 PKSA-------------PNPEGAYQWINFMLRPDIATQIVERLSFATPSLVAYRQLPQE- 322
Query: 157 LKGKPSLDTKLIAGVPPAEILARCEFLEPL 186
L+ P+L PP ++A E + PL
Sbjct: 323 LREDPAL-------FPPESVIANSETVSPL 345
>gi|222100190|ref|YP_002534758.1| spermidine/putrescine ABC transporter substrate-binding protein
[Thermotoga neapolitana DSM 4359]
gi|221572580|gb|ACM23392.1| Spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Thermotoga
neapolitana DSM 4359]
Length = 335
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 80/196 (40%), Gaps = 28/196 (14%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
K W +L GR+++++ REV+G T+ +Q + +
Sbjct: 142 KSWSIFEREDLRGRMTLLDDMREVLGAALKYLGYSVNTKNPKELEEAKQVVLRWKKNIAK 201
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAV--KRMSNVAVVVPKSGASLWADLWAIPAASR 113
FD T Y G+ W+ G++ DV + N +PK G +LW D IP ++
Sbjct: 202 FDATSYADGVVTGEYWVVHGYAEDVYQRIPEGEEENFDFFIPKEGGTLWIDNMVIPKGAK 261
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP 173
L +++I F L+ A + LP ++ + ++T+ I +
Sbjct: 262 ------------NVDLAYEFINFLLEPQNAAKIADYLGLPSPNVEARKYMETEPIYTL-- 307
Query: 174 AEILARCEFLEPLSEA 189
E L CEF+E + EA
Sbjct: 308 -EDLKNCEFIEDVGEA 322
>gi|261404067|ref|YP_003240308.1| family 1 extracellular solute-binding protein [Paenibacillus sp.
Y412MC10]
gi|261280530|gb|ACX62501.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
Y412MC10]
Length = 350
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W+DLW PE G++ +++ RE+IG + A A L L V FD
Sbjct: 153 WEDLWNPEYKGKVLLLDDNREMIGMALKKQGKSNSSTDEAEITAASDELKTLLPNVLAFD 212
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ + + WIA WS D +VA VVP+ GA++++D +AIP ++ K
Sbjct: 213 TDNIKQKMIQEEGWIATVWSGDAAFIAAENPDVAYVVPEEGATIFSDNYAIPKGAK--NK 270
Query: 118 QIGGRVRGPF--PLI----HQWIEFCLQTARALPF-------NTRVKLPEELL 157
++ + P + +++I + +A+ F NT + L EE L
Sbjct: 271 ELAEKFINFMMEPEVSAKNYEFIGYSNPNTKAMEFHSEEYRANTMINLTEEEL 323
>gi|378774664|ref|YP_005176907.1| spermidine/putrescine-binding periplasmic protein PotD1
[Pasteurella multocida 36950]
gi|386834628|ref|YP_006239945.1| bacterial extracellular solute-binding protein, putative
[Pasteurella multocida subsp. multocida str. 3480]
gi|417854587|ref|ZP_12499874.1| PotD [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|421262976|ref|ZP_15714061.1| PotD [Pasteurella multocida subsp. multocida str. P52VAC]
gi|425062948|ref|ZP_18466073.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida X73]
gi|425065036|ref|ZP_18468156.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida P1059]
gi|338217662|gb|EGP03508.1| PotD [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|356597212|gb|AET15938.1| spermidine/putrescine-binding periplasmic protein PotD1
[Pasteurella multocida 36950]
gi|385201331|gb|AFI46186.1| bacterial extracellular solute-binding protein, putative
[Pasteurella multocida subsp. multocida str. 3480]
gi|401690389|gb|EJS85670.1| PotD [Pasteurella multocida subsp. multocida str. P52VAC]
gi|404383654|gb|EJZ80105.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida X73]
gi|404384490|gb|EJZ80924.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida P1059]
Length = 348
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 81/200 (40%), Gaps = 28/200 (14%)
Query: 5 GFKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQ 52
F W DLW PE G++ +++ REV T A + A ++ L L N
Sbjct: 147 NFTAWGDLWKPEFKGKVQLLDDAREVFNIALLKLGQDPNTTDPAIIKQAYEELLKLRPN- 205
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V F+ + F G+V + W+ V A K + + +V PK G LW D AIPA S
Sbjct: 206 VLSFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLNMVFPKEGPVLWVDTLAIPANS 265
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKG---KPSLDTKLIA 169
K G H+ I + L A + P LK PS T+ A
Sbjct: 266 ----KNPDGA--------HKLINYLLSAKVAAQLAEEIGYPTSNLKALELLPSEVTQDPA 313
Query: 170 GVPPAEILARCEFLEPLSEA 189
P AEIL + + + +A
Sbjct: 314 VYPTAEILQNSHWQDDVGDA 333
>gi|428206397|ref|YP_007090750.1| extracellular solute-binding protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428008318|gb|AFY86881.1| extracellular solute-binding protein family 1 [Chroococcidiopsis
thermalis PCC 7203]
Length = 373
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 36/201 (17%)
Query: 8 DWKDLW--LPELAGRISMVNSPREVIG--------TQAAAGRIAVQQ---NLALLGNQVR 54
DW+ LW +L+GR+++++ REV+G + + ++Q L L +
Sbjct: 174 DWEYLWKNRQQLSGRMTLIDDVREVMGATLRMLGYSYNSKDESQIKQAYEKLRELKPSIA 233
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP-AASR 113
FD + GD+ +A+ +S+D + + N+ ++P SG SLW D AIP A
Sbjct: 234 AFDTDAWRSQILAGDLVLAMAYSTDGIKISQENPNLRYIIPASGTSLWTDTIAIPKTAPN 293
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTR--VKLPE----ELLKGKPSLDTKL 167
L+ + W+ + L+ A R V +P E L + DT L
Sbjct: 294 LDAA-------------YTWLNYNLEPTVAAEICQRQTVAIPNQVALEQLPTQLRQDTNL 340
Query: 168 IAGVPPAEILARCEFLEPLSE 188
PP +L +CE + PL +
Sbjct: 341 F---PPESVLNKCERISPLGD 358
>gi|322514242|ref|ZP_08067303.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Actinobacillus ureae ATCC
25976]
gi|322119854|gb|EFX91868.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Actinobacillus ureae ATCC
25976]
Length = 360
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 78/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV T A + L L + V
Sbjct: 160 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKLGKNPNTTNPEEIKAAYEELKKLRSNVL 219
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F + F G+V + W+ V A K + V +V PK G LW D AIPA ++
Sbjct: 220 SFTSDNPANSFIAGEVSVGQLWNGSVRIAKKEQAPVNMVFPKEGPVLWVDTLAIPANAKN 279
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE---ELLKGKPSLDTKLIAGV 171
+ H+ I + L A + P E LK P T+ A
Sbjct: 280 KEN------------AHKLINYLLSAPVAEKLTLEIGYPTSNVEALKTLPKEITEDPAIY 327
Query: 172 PPAEILARCEFLEPLSEA 189
P AE+L ++ + + +A
Sbjct: 328 PTAEVLKAAQWQDDVGDA 345
>gi|383310635|ref|YP_005363445.1| spermidine/putrescine-binding periplasmic protein PotD1
[Pasteurella multocida subsp. multocida str. HN06]
gi|380871907|gb|AFF24274.1| spermidine/putrescine-binding periplasmic protein PotD1
[Pasteurella multocida subsp. multocida str. HN06]
Length = 348
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 81/200 (40%), Gaps = 28/200 (14%)
Query: 5 GFKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQ 52
F W DLW PE G++ +++ REV T A + A ++ L L N
Sbjct: 147 NFTAWGDLWKPEFKGKVQLLDDAREVFNIALLKLGQDPNTTDPAIIKQAYEELLKLRPN- 205
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V F+ + F G+V + W+ V A K + + +V PK G LW D AIPA S
Sbjct: 206 VLSFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLNMVFPKEGPVLWVDTLAIPANS 265
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKG---KPSLDTKLIA 169
+ P H+ I + L A + P LK PS T+ A
Sbjct: 266 -----------KNP-DAAHKLINYLLSAKVAAQLAEEIGYPTSNLKALELLPSEVTQDPA 313
Query: 170 GVPPAEILARCEFLEPLSEA 189
P AEIL + + + +A
Sbjct: 314 VYPTAEILQNSHWQDDVGDA 333
>gi|284047717|ref|YP_003398056.1| extracellular solute-binding protein [Acidaminococcus fermentans
DSM 20731]
gi|283951938|gb|ADB46741.1| extracellular solute-binding protein family 1 [Acidaminococcus
fermentans DSM 20731]
Length = 353
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG----------TQAAAGRIAVQ-QNLALLGNQVRLFD 57
W DLW P GR+ ++N REV G ++A Q+L L V +D
Sbjct: 156 WNDLWDPAYKGRVILLNDSREVFGMALKKNGWSNNSTDPDQLAKAFQDLKELAPSVLAYD 215
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ F + WI WS D + + N+ V+PK G +WAD AIP ++
Sbjct: 216 TDSLKQKFIAEEGWIGTMWSGDASFSYRENPNLGFVIPKEGTLVWADTLAIPKGAK 271
>gi|354586089|ref|ZP_09004762.1| extracellular solute-binding protein family 1 [Paenibacillus lactis
154]
gi|353183065|gb|EHB48597.1| extracellular solute-binding protein family 1 [Paenibacillus lactis
154]
Length = 350
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W+DLW PE G++ +++ RE+IG T A A +L L V FD
Sbjct: 153 WEDLWNPEYKGKVLLLDDNREMIGMALKKQGKSNSTTDEAEINAAALDLKTLLPNVLAFD 212
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ + + WIA WS D + +VA VVP+ GA++++D +AIP ++ K
Sbjct: 213 TDNIKQKMIQEEGWIATVWSGDAAFIAEENPDVAYVVPEEGATIFSDNYAIPKGAK--NK 270
Query: 118 QIGGRVRGPF--PLI----HQWIEFCLQTARALPF-------NTRVKLPEELL 157
++ + P + +++I + +A+ F NT + L +E L
Sbjct: 271 ELAEKFINFMLEPEVSAKNYEYIGYSNPNTKAMEFHSEDYRSNTMINLTDEEL 323
>gi|359299977|ref|ZP_09185816.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus [parainfluenzae] CCUG 13788]
gi|402305490|ref|ZP_10824549.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sputorum HK 2154]
gi|400376603|gb|EJP29490.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sputorum HK 2154]
Length = 359
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 28/199 (14%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQV 53
F W DLW PE A ++ +++ REV T A + A ++ L L + V
Sbjct: 159 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKLGKNPNTTDPAEIKEAFEE-LKKLRSNV 217
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F+ + F G+V + W+ V A K + + +V PK G LW D AIPA S+
Sbjct: 218 LSFNSDNPANSFISGEVSVGQLWNGSVRIAKKEKAPIDMVFPKEGPVLWVDTLAIPANSK 277
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AG 170
+ H+ I + L + + + P +K L ++ A
Sbjct: 278 NKEN------------AHKLINYLLSASVSKQLTLEIGYPTSNVKALEELPKEITQDPAI 325
Query: 171 VPPAEILARCEFLEPLSEA 189
P AEIL + + + + +A
Sbjct: 326 YPTAEILQKSHWQDDVGDA 344
>gi|152979401|ref|YP_001345030.1| extracellular solute-binding protein [Actinobacillus succinogenes
130Z]
gi|150841124|gb|ABR75095.1| extracellular solute-binding protein family 1 [Actinobacillus
succinogenes 130Z]
Length = 363
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 80/200 (40%), Gaps = 29/200 (14%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQV 53
F W DLW PE AG++ +++ REV T + A ++ L L N V
Sbjct: 162 FTSWGDLWKPEYAGKVQLLDDAREVFNIALVKLGFNPNTTNPDEIKAAYEELLKLRPN-V 220
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN-VAVVVPKSGASLWADLWAIPAAS 112
F+ + F G+V + W+ V A K N + +V PK G LW D AIPA +
Sbjct: 221 LSFNSDNPANSFIAGEVELGQLWNGSVRIAKKDAPNTIDMVFPKEGPVLWVDTLAIPANA 280
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---A 169
+ H+ I + L A + P LK K L ++ A
Sbjct: 281 KHPDAA------------HKLINYLLSEKVAEKLTLEIGYPTSNLKAKAKLPAEITQDPA 328
Query: 170 GVPPAEILARCEFLEPLSEA 189
P AE+L + + + EA
Sbjct: 329 IYPAAEVLQNAHWQDDVGEA 348
>gi|254362547|ref|ZP_04978648.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Mannheimia haemolytica
PHL213]
gi|153094148|gb|EDN75044.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Mannheimia haemolytica
PHL213]
Length = 323
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 28/199 (14%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQV 53
F W DLW PE AG++ +++ REV T + A ++ L L V
Sbjct: 123 FTSWGDLWKPEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPDEIKEAFEE-LKKLRPNV 181
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F + F G+V + W+ V A K + V +V PK G LW D AIPA ++
Sbjct: 182 LSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKENAPVDMVFPKEGPVLWVDTLAIPANAK 241
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE---ELLKGKPSLDTKLIAG 170
+ H+ I + L A + P E LK P T+ A
Sbjct: 242 NKEN------------AHKLINYLLSAKVAEKLTLAIGYPTSNVEALKVLPKEITEDTAI 289
Query: 171 VPPAEILARCEFLEPLSEA 189
P AE+L + ++ + + +A
Sbjct: 290 YPSAEVLQKSQWQDDVGDA 308
>gi|417852729|ref|ZP_12498230.1| PotD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
gi|338216364|gb|EGP02484.1| PotD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
Length = 348
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 81/200 (40%), Gaps = 28/200 (14%)
Query: 5 GFKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQ 52
F W DLW PE G++ +++ REV T A + A ++ L L N
Sbjct: 147 NFTAWGDLWKPEFKGKVQLLDDAREVFNIALLKLGQDPNTTDPAIIKQAYEELLKLRPN- 205
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
+ F+ + F G+V + W+ V A K + + +V PK G LW D AIPA S
Sbjct: 206 ILSFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLNMVFPKEGPVLWVDTLAIPANS 265
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKG---KPSLDTKLIA 169
K G H+ I + L A + P LK PS T+ A
Sbjct: 266 ----KNPDGA--------HKLINYLLSAKVAAQLAEEIGYPTSNLKALELLPSEVTQDPA 313
Query: 170 GVPPAEILARCEFLEPLSEA 189
P AEIL + + + +A
Sbjct: 314 VYPTAEILQNSHWQDDVGDA 333
>gi|428311756|ref|YP_007122733.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
gi|428253368|gb|AFZ19327.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
Length = 378
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 50/216 (23%)
Query: 7 KDWKDLW--LPELAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTH---- 60
+DW LW +L+ R++++N REV+G L +LG D H
Sbjct: 177 EDWSYLWENQQQLSKRMTLLNDVREVMGA-----------TLKMLGYSYNSTDPQHIQQA 225
Query: 61 YLKVFGI------------------GDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLW 102
Y K+ + GD+ +A+ +S+D + ++ VVPKSG+SLW
Sbjct: 226 YQKLMDLKSNLASFTSDAWRPQVLSGDLSVAMCYSADANEVMGENESLEYVVPKSGSSLW 285
Query: 103 ADLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLP---EELLKG 159
D AIP ++ V G + WI F LQ A R+ +E K
Sbjct: 286 MDTLAIPKSA--------PNVEGAY----AWINFMLQPDVAAEVCKRLSFATPNQEAFKL 333
Query: 160 KPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
P + PP IL CE + P+ E+ + Y+
Sbjct: 334 LPPDVKSNQSLFPPEAILETCESIAPVPESISAVYD 369
>gi|428211500|ref|YP_007084644.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
gi|427999881|gb|AFY80724.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
Length = 376
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 86/205 (41%), Gaps = 44/205 (21%)
Query: 7 KDWKDLWL--PELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQ 52
DW+ LW EL+ R++++N REV+G T A R A ++L L
Sbjct: 175 DDWEYLWTHQSELSRRLTLMNDVREVMGAGLRSLGYSYNSTDPAQLR-AAYEHLVNLKPA 233
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
+ F + + GD+ +A+G+S D L ++ VVP SG+SLW D IP
Sbjct: 234 LANFTTDGWRDLILAGDLEVAMGFSFDALSVSDENPDLEYVVPMSGSSLWTDTMVIP--- 290
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQ---TAR-------ALPFNTRVKLPEELLKGKPS 162
+ V+G + WI F Q TA A P L + L+ P+
Sbjct: 291 -----RNAPNVQGAY----AWINFMFQPQVTADLIERLYFATPNRAAYNLLSQELRENPT 341
Query: 163 LDTKLIAGVPPAEILARCEFLEPLS 187
L P +L RCE + PLS
Sbjct: 342 L-------FPSESVLERCEGILPLS 359
>gi|417322038|ref|ZP_12108572.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus 10329]
gi|328470192|gb|EGF41103.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus 10329]
Length = 344
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 42/209 (20%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + ++ +++ R+V G T+ A +L L N V L++
Sbjct: 147 WADLWESQYEQQVMLIDDVRDVFGMALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYN 206
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+ + + W+ + M + V+P+ GA LW D + IP+ S+ +
Sbjct: 207 SDAPQVPYVSGETSVGMQWNGNAFQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNKA- 265
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARALPFNT-----------RVKLPEELLKGKPSLDTK 166
L H++I F Q+ T R KLPEEL +
Sbjct: 266 -----------LAHKFINFMYQSENQAEIVTSLGYASATNAGRDKLPEELKNNRTIF--- 311
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYE 195
P +E + + EF+ + TL+ YE
Sbjct: 312 -----PSSEDMKKGEFINDVGAETLAIYE 335
>gi|376006159|ref|ZP_09783485.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|375325462|emb|CCE19238.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
Length = 363
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 50/210 (23%)
Query: 4 NGFKDWKDLWL--PELAGRISMVNSPREVIGTQAAAGRIAVQQN-------------LAL 48
N +DW+DLW +L R++++N REV+G A+ R+ N L
Sbjct: 159 NSPEDWEDLWTYQDQLNRRLTLLNDVREVMG--ASLRRLGYSYNSTNPREINQAYQELVK 216
Query: 49 LGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 108
L + F + +GD+ +A+ +SSD + ++ + P SG+SLW D I
Sbjct: 217 LRGAIASFTTDAWRPQMIVGDLLLAMCYSSDAAEVMPENEDLEYITPVSGSSLWIDTLVI 276
Query: 109 PAASRLETKQIGGRVRGPFPL-IHQWIEFCL------QTARALPFNT-----RVKLPEEL 156
P ++ P P +QWI F L Q L F T +LP+E
Sbjct: 277 PKSA-------------PNPEGAYQWINFMLRPDIATQIVERLSFATPSLVAYRQLPQE- 322
Query: 157 LKGKPSLDTKLIAGVPPAEILARCEFLEPL 186
L+ P+L PP ++A E + PL
Sbjct: 323 LREDPAL-------FPPESVIANSETVSPL 345
>gi|229522680|ref|ZP_04412096.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TM 11079-80]
gi|419836822|ref|ZP_14360262.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46B1]
gi|421343638|ref|ZP_15794042.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43B1]
gi|421355443|ref|ZP_15805774.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-45]
gi|423736933|ref|ZP_17710051.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41B1]
gi|424011196|ref|ZP_17754068.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-44C1]
gi|229340665|gb|EEO05671.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TM 11079-80]
gi|395942205|gb|EJH52882.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43B1]
gi|395950113|gb|EJH60732.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-45]
gi|408625281|gb|EKK98195.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41B1]
gi|408854981|gb|EKL94722.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-44C1]
gi|408857372|gb|EKL97060.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46B1]
Length = 343
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 42/214 (19%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQ 52
NG W DLW + ++ +++ R+V G ++ ++L L
Sbjct: 141 NGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEEEIKKAYESLVALKKN 200
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V L++ + G+V + + W+ + M + V+P+ GA LW D + IP+ S
Sbjct: 201 VLLYNSDAPHVPYVSGEVTLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS 260
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVK-----LPEELLKGKP 161
+ PL H++I F Q ++L + + K LP E L+ P
Sbjct: 261 K------------NIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLPAE-LRDNP 307
Query: 162 SLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
++ P E + + EF+ + TL+ YE
Sbjct: 308 TI-------FPSDEDMKKGEFINDVGPETLAIYE 334
>gi|52424864|ref|YP_088001.1| PotD protein [Mannheimia succiniciproducens MBEL55E]
gi|52306916|gb|AAU37416.1| PotD protein [Mannheimia succiniciproducens MBEL55E]
Length = 382
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 80/199 (40%), Gaps = 27/199 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE AG++ +++ REV TQ A A + L L V
Sbjct: 181 FTSWGDLWKPEFAGKVQLLDDAREVFNIALLKLGKNPNTQDPAEIKAAYEELLKLRPNVL 240
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM-SNVAVVVPKSGASLWADLWAIPAASR 113
F+ + F G+V + W+ V A K ++ ++ PK G LW D AIPA S
Sbjct: 241 SFNSDNPANAFISGEVEVGQLWNGSVRIAKKEQPGSIDMIFPKEGPVLWVDNLAIPATS- 299
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGK---PSLDTKLIAG 170
K G H+ I + L A + P ++ K P T+ A
Sbjct: 300 ---KNPDG--------AHKLINYLLGAKAAEKLTLAIGYPTANVEAKKVLPKEITEDPAI 348
Query: 171 VPPAEILARCEFLEPLSEA 189
P AE+L + E + EA
Sbjct: 349 YPTAELLRTANWQEDVGEA 367
>gi|23100612|ref|NP_694079.1| spermidine:putrescine ABC transporter [Oceanobacillus iheyensis
HTE831]
gi|22778845|dbj|BAC15113.1| spermidine:putrescine ABC transporter spermidine:putrescine-binding
protein [Oceanobacillus iheyensis HTE831]
Length = 358
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 42/211 (19%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQVRLFD 57
W DLW P L +I +++ RE+IG + ++ + L L VR
Sbjct: 159 WHDLWDPALENQILLIDGAREIIGMGLNSLGYSLNDTNPEHLYQALEKLEELTPNVRAIV 218
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ + IA+GWS D + + +VP+ G++LW D + IP +R
Sbjct: 219 GDENKMLMANNEATIAIGWSGDAADIMGENEAIDYLVPEEGSNLWFDNFVIPKTAR---- 274
Query: 118 QIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVK-----LPEELLKGKPSLDTK 166
I G HQ+I F L Q + ++T K +PEE+++ D +
Sbjct: 275 NIDGA--------HQFINFMLDAEIAAQNTEYVSYSTPNKEALQFMPEEMVE-----DER 321
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
P E+ R E E L + L+ Y L
Sbjct: 322 F---YPDPELTDRLEVYENLGQRNLAFYNEL 349
>gi|395236033|ref|ZP_10414233.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter sp. Ag1]
gi|394729339|gb|EJF29335.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter sp. Ag1]
Length = 370
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 35/181 (19%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T AA A L L +R F + Y+ G
Sbjct: 177 VSFLDAPSEIYATVLHYLGKDPNSTNAADYTGAANDLLMKLRPNIRYFHSSQYINDLANG 236
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIG 120
D+ +A+GWS D+L A R NVA +PK GA ++ D++A+P A ++ E Q
Sbjct: 237 DICVAIGWSGDILQAANRAKEAKNGVNVAYSIPKEGAMVYFDMFALPVDAKNKDEAYQFL 296
Query: 121 GRVRGPFPL--IHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPPAEILA 178
+ P + I I + A P L EE ++ P + PPA+I A
Sbjct: 297 NYLMKPDVIANISNHIYYANANKEATPL-----LSEE-VRSNPGI-------YPPADIRA 343
Query: 179 R 179
+
Sbjct: 344 K 344
>gi|153837449|ref|ZP_01990116.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ3810]
gi|149749249|gb|EDM60034.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ3810]
Length = 344
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 42/209 (20%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + ++ +++ R+V G T+ A +L L N V L++
Sbjct: 147 WADLWESQYEQQVMLIDDVRDVFGMALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYN 206
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+ + + W+ + M + V+P+ GA LW D + IP+ S+ +
Sbjct: 207 SDAPQVPYVSGETSVGMQWNGNAFQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNKA- 265
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARALPFNT-----------RVKLPEELLKGKPSLDTK 166
L H++I F Q+ T R KLPEEL +
Sbjct: 266 -----------LAHKFINFMYQSENQAEIVTSLGYASATNAGRDKLPEELKNNRTIF--- 311
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYE 195
P +E + + EF+ + TL+ YE
Sbjct: 312 -----PSSEDMKKGEFINDVGAETLAIYE 335
>gi|261493836|ref|ZP_05990350.1| Lpp38 [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|452745507|ref|ZP_21945341.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Mannheimia haemolytica serotype 6 str. H23]
gi|1142681|gb|AAA84748.1| Lpp38 [Mannheimia haemolytica]
gi|261310539|gb|EEY11728.1| Lpp38 [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|452086382|gb|EME02771.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Mannheimia haemolytica serotype 6 str. H23]
Length = 364
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 28/199 (14%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQV 53
F W DLW PE AG++ +++ REV T + A ++ L L V
Sbjct: 164 FTSWGDLWKPEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPDEIKEAFEE-LKKLRPNV 222
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F + F G+V + W+ V A K + V +V PK G LW D AIPA ++
Sbjct: 223 LSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKENAPVDMVFPKEGPVLWVDTLAIPANAK 282
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE---ELLKGKPSLDTKLIAG 170
+ H+ I + L A + P E LK P T+ A
Sbjct: 283 NKEN------------AHKLINYLLSAKVAEKLTLAIGYPTSNVEALKVLPKEITEDTAI 330
Query: 171 VPPAEILARCEFLEPLSEA 189
P AE+L + ++ + + +A
Sbjct: 331 YPSAEVLQKSQWQDDVGDA 349
>gi|407803625|ref|ZP_11150459.1| extracellular solute-binding protein [Alcanivorax sp. W11-5]
gi|407022469|gb|EKE34222.1| extracellular solute-binding protein [Alcanivorax sp. W11-5]
Length = 351
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 85/212 (40%), Gaps = 46/212 (21%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRIAV-QQNLALLGNQ 52
+G W DLW P+ GR+ + N REV G + IA + L L
Sbjct: 149 DGVTKWADLWDPKYKGRVLLTNDVREVFHIGLRVLGYSGNSTSEEEIAAAYEKLRELMPS 208
Query: 53 VRLFD----RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 108
VR F+ R YL+ G+ I + W+ + + A + + +A V P+ GA +W D + I
Sbjct: 209 VRAFNSDAPRMPYLE----GEADIGLIWNGEAVMAQEELPELAYVYPEEGAVIWVDNFVI 264
Query: 109 PAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI 168
P +R H++I+F LQ A ++ EE+ P+L + +
Sbjct: 265 PKNAR------------NVEAAHKFIDFVLQPEVA------AQISEEIGYATPNLPAREL 306
Query: 169 ---------AGVPPAEILARCEFLEPLSEATL 191
P E L EF + EA L
Sbjct: 307 LPPEVRENRTSYPTEEDLENAEFQSDVGEALL 338
>gi|91224115|ref|ZP_01259378.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 12G01]
gi|433659509|ref|YP_007300368.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio parahaemolyticus BB22OP]
gi|91191026|gb|EAS77292.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 12G01]
gi|432510896|gb|AGB11713.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio parahaemolyticus BB22OP]
Length = 344
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 42/209 (20%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW + ++ +++ R+V G T+ A +L L N V L++
Sbjct: 147 WADLWESQYEQQVMLIDDVRDVFGMALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYN 206
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+ + + W+ + M + V+P+ GA LW D + IP+ S+ +
Sbjct: 207 SDAPQVPYVSGETSVGMQWNGNAFQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNKA- 265
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARALPFNT-----------RVKLPEELLKGKPSLDTK 166
L H++I F Q+ T R KLPEEL +
Sbjct: 266 -----------LAHKFINFMYQSENQAEIVTSLGYASATNAGRDKLPEELKNNRTIF--- 311
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYE 195
P +E + + EF+ + TL+ YE
Sbjct: 312 -----PSSEDMKKGEFINDVGAETLAIYE 335
>gi|148652871|ref|YP_001279964.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1]
gi|148571955|gb|ABQ94014.1| extracellular solute-binding protein, family 1 [Psychrobacter sp.
PRwf-1]
Length = 374
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 39/213 (18%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
N W DLW PE GR+ ++N R+V T A Q L+ L
Sbjct: 170 NSITSWNDLWRPEFEGRVMLMNDLRDVFTMGLLTLGYPATTHDPKHIEAAYQKLSKLMPN 229
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKR-MSNVAVVVPKSGASLWADLWAIPAA 111
VR F+ F G+ ++ + W+ +V+ A + M + V PK G +W D +IP
Sbjct: 230 VRTFNSDAPRMPFMEGETYLGLAWNGEVIMAQDQGMPELDFVYPKEGVIMWMDNMSIPKN 289
Query: 112 SRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGV 171
++ + +I++ L+ P N + + EE+ G P+ K +
Sbjct: 290 AKNRENA------------YAFIDYLLR-----PDNAAI-ISEEIGYGSPNESAKKLMPA 331
Query: 172 ---------PPAEILARCEFLEPLSEATLSDYE 195
PP ++L F E + + T++ Y+
Sbjct: 332 DIANNQIIYPPDDLLGHALFREDVGDTTMALYQ 364
>gi|260582673|ref|ZP_05850461.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
influenzae NT127]
gi|260094239|gb|EEW78139.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
influenzae NT127]
Length = 379
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 179 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 238
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIPA ++
Sbjct: 239 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLNMVFPKEGPVLWVDTLAIPATAK- 297
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
G H+ I + L A + P ++ K +L ++ A
Sbjct: 298 -------NPEG----AHKLINYMLGKKTAEKLTLAIGYPTSNIEAKKALPKEITEDPAIY 346
Query: 172 PPAEILARCEFLEPLSEA 189
PPA++L + + + +A
Sbjct: 347 PPADVLRNSHWQDDVGDA 364
>gi|261213133|ref|ZP_05927417.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC341]
gi|260838198|gb|EEX64875.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC341]
Length = 344
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQ 52
NG W DLW + ++ +++ R+V G ++ ++L L N
Sbjct: 142 NGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEDEIKKAYESLVALKNN 201
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V L++ + G+ + + W+ + M + V+P+ GA LW D + IP+ S
Sbjct: 202 VLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS 261
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNT-----RVKLPEELLKGKP 161
PL H++I F + ++L + + R LP E L+ P
Sbjct: 262 T------------NIPLAHKFINFMYLPENQAEIVKSLGYASATKGGRAMLPAE-LRDNP 308
Query: 162 SLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
++ P E + + EF+ + TL+ YE
Sbjct: 309 TI-------FPSDEDMKKGEFINDVGSETLAIYE 335
>gi|411118601|ref|ZP_11390982.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410712325|gb|EKQ69831.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 375
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 48/218 (22%)
Query: 5 GFKDWKDLWL--PELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGN 51
G +DW+DLW P+L ++++++ REVIG + + + L L
Sbjct: 170 GPEDWQDLWQMQPQLNRKMTLLSDVREVIGASLKSLGYSYNSTNPSEIKRAYEKLVQLKP 229
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAV--VVPKSGASLWADLWAIP 109
+ F + +GD+ +++ +S+D + ++ + + V+PKSG SLW+D IP
Sbjct: 230 AIATFTTDAWRDRLLVGDLLLSMAYSADAVRLIQENPDTKLRYVIPKSGTSLWSDAMVIP 289
Query: 110 AASRLETKQIGGRVRGPFP-LIHQWIEFCLQTARALPFNTRV-----------KLPEELL 157
S P P + WI F +Q + A+ R+ +LP L
Sbjct: 290 TTS-------------PNPDAAYAWINFMMQPSVAVDVTQRLFFATPNQAAYDQLPAPLR 336
Query: 158 KGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
+ + PP EI+ CE + PL Y+
Sbjct: 337 NNR--------SLFPPEEIIKACERIIPLEAKVTELYD 366
>gi|428217887|ref|YP_007102352.1| extracellular solute-binding protein [Pseudanabaena sp. PCC 7367]
gi|427989669|gb|AFY69924.1| extracellular solute-binding protein family 1 [Pseudanabaena sp.
PCC 7367]
Length = 392
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
+DW+ +W R++++N PREV+G + A + L L V
Sbjct: 191 EDWQFMWEHIDRLRLTLLNDPREVMGMALHTLNYSYNSDNGDELQAAFERLQDLKPAVSK 250
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
FD + + GD I++ +S D L AV++ ++ ++P SG S+W D IP +
Sbjct: 251 FDTYAWAEPLMAGDYLISMAYSGDGLNAVRQNPDIKYILPASGTSIWTDAVVIPKTA--- 307
Query: 116 TKQIGGRVRGPFP-LIHQWIEFCLQTARALPFN--------TRVKLP--EELLKGKPSLD 164
P P + WI+F +Q A + + LP +E LK P
Sbjct: 308 ----------PDPEAAYAWIDFIMQPEIAARMSEESSYGTANKAALPKIKEELKDIP--- 354
Query: 165 TKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
A +P AEILA+ + L L + L YE
Sbjct: 355 ----AWLPSAEILAKSDRLVKLPDEVLQVYE 381
>gi|332290372|ref|YP_004421224.1| hypothetical protein UMN179_02316 [Gallibacterium anatis UMN179]
gi|330433268|gb|AEC18327.1| conserved hypothetical protein [Gallibacterium anatis UMN179]
Length = 348
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 76/198 (38%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE G++ +++ REV T+ A + L L V
Sbjct: 148 FTSWADLWKPEYKGKVQLLDDAREVFNIALLKLGEDPNTKDPAIIKKAYEELLKLRPNVL 207
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ + A K + + V PK G LW D AIP S+
Sbjct: 208 AFNSDNPANSFIAGEVELGQLWNGSIRIAKKENAPINAVYPKEGPVLWVDTLAIPKTSKN 267
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG---V 171
H+ I + L A T + P LK K L ++
Sbjct: 268 PDAA------------HKLINYLLSPKVAARLATEIGYPTTNLKAKEMLPKEITEDPSIY 315
Query: 172 PPAEILARCEFLEPLSEA 189
PPA++L + + + +A
Sbjct: 316 PPADVLKNSYWQDDVGDA 333
>gi|298492376|ref|YP_003722553.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
0708]
gi|298234294|gb|ADI65430.1| extracellular solute-binding protein family 1 ['Nostoc azollae'
0708]
Length = 363
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 28/198 (14%)
Query: 7 KDWKDLWLPE--LAGRISMVNSPREVIG--------TQAAAGRIAVQQ---NLALLGNQV 53
+DW+ LW + L R++++N REV+G + + + ++Q L L +
Sbjct: 164 EDWEYLWRNQDKLYKRMTLLNDVREVMGATLKMLGYSYNSQNEMEIKQAYEKLLSLKPAL 223
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
FD + GD+ +A+ +S+D + K + + V+P+SG+SLW D IP
Sbjct: 224 AAFDTDAWQNQILAGDLLLAMCYSADGIKISKENAKLKYVIPRSGSSLWTDTIVIP---- 279
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGV-- 171
+ P + WI L+ A + R+ + G L ++
Sbjct: 280 --------KTANNLPGAYSWINLLLKPDVAAAISKRLNIATPNRAGFEQLPNQIQNNTNL 331
Query: 172 -PPAEILARCEFLEPLSE 188
PP IL +CE + P+ +
Sbjct: 332 FPPQGILDKCERVTPIGK 349
>gi|409993243|ref|ZP_11276392.1| extracellular solute-binding protein [Arthrospira platensis str.
Paraca]
gi|291569868|dbj|BAI92140.1| putative spermidine/putrescine ABC transporter substrate-binding
protein [Arthrospira platensis NIES-39]
gi|409935915|gb|EKN77430.1| extracellular solute-binding protein [Arthrospira platensis str.
Paraca]
Length = 363
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 50/207 (24%)
Query: 7 KDWKDLWL--PELAGRISMVNSPREVIGTQAAAGRIAVQQN-------------LALLGN 51
+DW+DLW +L R++++N REV+G A+ R+ N L L
Sbjct: 162 EDWEDLWTYQDQLNRRLTLLNDVREVMG--ASLRRLGYSYNSTNPREINQAYQELVKLRG 219
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 111
+ F + +GD+ +A+ +SSD + ++ + P SG+SLW D IP +
Sbjct: 220 AIASFTTDAWRPQMIVGDLLLAMCYSSDAAEVMPENEDLEYITPVSGSSLWIDTLVIPKS 279
Query: 112 SRLETKQIGGRVRGPFPL-IHQWIEFCL------QTARALPFNT-----RVKLPEELLKG 159
+ P P +QWI F L Q L F T +LP+E L+
Sbjct: 280 A-------------PNPEGAYQWINFMLRPDIATQIVERLSFATPSLVAYRQLPQE-LRE 325
Query: 160 KPSLDTKLIAGVPPAEILARCEFLEPL 186
P+L PP ++A E + PL
Sbjct: 326 DPAL-------FPPESVIANSETVSPL 345
>gi|434404601|ref|YP_007147486.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
gi|428258856|gb|AFZ24806.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
Length = 361
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 3 ENGFKDWKDLWL--PELAGRISMVNSPREVIG-TQAAAGRIAVQQN----------LALL 49
E +DW LW +L R++++N REVIG T G QN L +L
Sbjct: 157 ETAPEDWDYLWQNKEKLNKRMTLLNDVREVIGATLRMLGYSYNSQNETEIKQAYEKLKVL 216
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
V FD + GD+ +A+ +S D + + + V+P+SG++LW D IP
Sbjct: 217 KPAVSAFDTDAWQNQLLAGDLLLAMCYSGDAVKMSRENPKLKFVIPRSGSTLWTDNLVIP 276
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE------ELLKGKPSL 163
+ + G + WI + LQ + F R+ + +LL +
Sbjct: 277 K----DAPNLAG--------AYAWINWILQPEVSAQFTERLNIATPNSAAFDLLPKRLQE 324
Query: 164 DTKLIAGVPPAEILARCEFLEPLSE 188
D L PP L +CE + PL +
Sbjct: 325 DENLF---PPESSLEKCERVTPLGK 346
>gi|359792822|ref|ZP_09295616.1| family 1 extracellular solute-binding protein [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359251015|gb|EHK54425.1| family 1 extracellular solute-binding protein [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 366
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 22/127 (17%)
Query: 9 WKDLWLPE----LAG-RISMVNSPREVIGTQ-----------AAAGRIAVQQNLALLGNQ 52
W + PE LAG + +++SP ++I T ++ V++ L L
Sbjct: 157 WDVFYKPENLAKLAGCGVYVLDSPSDIIPTTLNYLGLSPESTSSEDFAKVEETLLALRPH 216
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
+R F + Y+ GD+ +A+GWS DV A R + V V+PK GA +W D
Sbjct: 217 IRKFHSSEYINALANGDICLAIGWSGDVFQARDRAAEADQGVVVDYVIPKEGAEMWFDQM 276
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 277 AIPADAK 283
>gi|219870359|ref|YP_002474734.1| spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
parasuis SH0165]
gi|219690563|gb|ACL31786.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Haemophilus parasuis SH0165]
Length = 346
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 26/200 (13%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQ 52
+ F W DLW PE G++ +++ REV T+ A A + L L
Sbjct: 144 DNFTAWGDLWKPEFKGKVQLLDDAREVFNIALLKLGQDPNTKDPAVIKAAYEELLKLRPN 203
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V F + F G+V + W+ V A K + V +V PK G LW D AIP+
Sbjct: 204 VLAFSSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPVNMVFPKEGPVLWVDTLAIPS-- 261
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---A 169
V+ P H+ I + L A + P +K L ++ A
Sbjct: 262 ---------NVKNP-DAAHKLINYLLSAPVAEKLTLEIGYPTSNVKALEKLPKEITEDPA 311
Query: 170 GVPPAEILARCEFLEPLSEA 189
P +E+L + ++ + + +A
Sbjct: 312 IYPTSEVLQKSQWQDDVGDA 331
>gi|33152199|ref|NP_873552.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus ducreyi 35000HP]
gi|33148421|gb|AAP95941.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus ducreyi 35000HP]
Length = 359
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 78/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE ++ +++ REV T A + L L V
Sbjct: 159 FTAWADLWKPEFVNKVQLLDDAREVFNIALLKLGKNPNTTDPAEIKEAYEELKKLRPNVL 218
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIPA S+
Sbjct: 219 SFNSDNPANAFISGEVSVGQLWNGSVRIAKKEQAPIDMVFPKEGPVLWVDTLAIPANSKN 278
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE---ELLKGKPSLDTKLIAGV 171
+ H+ I + L A + P E LK P T+ A
Sbjct: 279 KEN------------AHKLINYLLSAPVAEKLTLAIGYPTSNIEALKVLPKEITQDPAIY 326
Query: 172 PPAEILARCEFLEPLSEA 189
P AE+L + ++ + + +A
Sbjct: 327 PTAEVLQKSQWQDDVGDA 344
>gi|147672269|ref|YP_001214973.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|227120303|ref|YP_002822198.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|262168935|ref|ZP_06036629.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC27]
gi|146314652|gb|ABQ19192.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|227015753|gb|ACP11962.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|262022634|gb|EEY41341.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC27]
Length = 343
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQ 52
NG W DLW + ++ +++ R+V G ++ ++L L
Sbjct: 141 NGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEEEIKKAYESLVALKKN 200
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V L++ + G+ + + W+ + M + V+P+ GA LW D + IP+ S
Sbjct: 201 VLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS 260
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVK-----LPEELLKGKP 161
+ PL H++I F Q ++L + + K LP E L+ P
Sbjct: 261 K------------NIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLPAE-LRDNP 307
Query: 162 SLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
++ P E + + EF+ + TL+ YE
Sbjct: 308 TI-------FPSDEDMKKSEFINDVGPETLAIYE 334
>gi|270261134|ref|ZP_06189407.1| hypothetical protein SOD_a03590 [Serratia odorifera 4Rx13]
gi|421782671|ref|ZP_16219125.1| putrescine-binding periplasmic protein [Serratia plymuthica A30]
gi|270044618|gb|EFA17709.1| hypothetical protein SOD_a03590 [Serratia odorifera 4Rx13]
gi|407755080|gb|EKF65209.1| putrescine-binding periplasmic protein [Serratia plymuthica A30]
Length = 369
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T AA +L L L +R F + Y+ G
Sbjct: 176 VSFLDAPSEVYATVLHYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GWS DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWSGDVMQAANRAKEAKNGVNVAYTIPKEGALTYFDMFAMPADAK 286
>gi|342904851|ref|ZP_08726648.1| Spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
haemolyticus M21621]
gi|341952450|gb|EGT78977.1| Spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
haemolyticus M21621]
Length = 360
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 160 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 219
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP +
Sbjct: 220 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLDMVFPKEGPVLWVDTLAIPKTA-- 277
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 278 --KNPDG--------AHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDPAIY 327
Query: 172 PPAEILARCEFLEPLSEA 189
PPA++L + + + +A
Sbjct: 328 PPADVLKNSHWQDDVGDA 345
>gi|419839300|ref|ZP_14362709.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
haemolyticus HK386]
gi|386909440|gb|EIJ74113.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
haemolyticus HK386]
Length = 360
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 160 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 219
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP +
Sbjct: 220 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLDMVFPKEGPVLWVDTLAIPKTA-- 277
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 278 --KNPDG--------AHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDPAIY 327
Query: 172 PPAEILARCEFLEPLSEA 189
PPA++L + + + +A
Sbjct: 328 PPADVLKNSHWQDDVGDA 345
>gi|417841671|ref|ZP_12487774.1| Spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
haemolyticus M19501]
gi|341948892|gb|EGT75507.1| Spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
haemolyticus M19501]
Length = 360
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 160 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 219
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP +
Sbjct: 220 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLDMVFPKEGPVLWVDTLAIPKTA-- 277
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 278 --KNPDG--------AHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDPAIY 327
Query: 172 PPAEILARCEFLEPLSEA 189
PPA++L + + + +A
Sbjct: 328 PPADVLKNSHWQDDVGDA 345
>gi|417839852|ref|ZP_12486016.1| Spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
haemolyticus M19107]
gi|417840158|ref|ZP_12486308.1| Spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
haemolyticus M19107]
gi|341949920|gb|EGT76518.1| Spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
haemolyticus M19107]
gi|341951485|gb|EGT78056.1| Spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
haemolyticus M19107]
Length = 360
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 160 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 219
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP +
Sbjct: 220 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLDMVFPKEGPVLWVDTLAIPKTA-- 277
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 278 --KNPDG--------AHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDPAIY 327
Query: 172 PPAEILARCEFLEPLSEA 189
PPA++L + + + +A
Sbjct: 328 PPADVLKNSHWQDDVGDA 345
>gi|448241410|ref|YP_007405463.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia marcescens WW4]
gi|445211774|gb|AGE17444.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia marcescens WW4]
Length = 369
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T AA +L L L +R F + Y+ G
Sbjct: 176 VSFLDAPSEVYATVLHYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GWS DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWSGDVMQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAK 286
>gi|453062799|gb|EMF03787.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Serratia marcescens VGH107]
Length = 368
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T AA +L L L +R F + Y+ G
Sbjct: 176 VSFLDAPSEVYATVLHYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GWS DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWSGDVMQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAK 286
>gi|419828281|ref|ZP_14351772.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-1A2]
gi|419833202|ref|ZP_14356663.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A2]
gi|422312585|ref|ZP_16396240.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1035(8)]
gi|422917159|ref|ZP_16951486.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02A1]
gi|423820186|ref|ZP_17716089.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55C2]
gi|423853555|ref|ZP_17719881.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59A1]
gi|423880885|ref|ZP_17723483.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-60A1]
gi|423997575|ref|ZP_17740833.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02C1]
gi|424016282|ref|ZP_17756122.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55B2]
gi|424019223|ref|ZP_17759018.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59B1]
gi|424624766|ref|ZP_18063237.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A1]
gi|424629267|ref|ZP_18067563.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-51A1]
gi|424633298|ref|ZP_18071407.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-52A1]
gi|424636390|ref|ZP_18074404.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55A1]
gi|424640327|ref|ZP_18078216.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A1]
gi|424648362|ref|ZP_18086031.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A1]
gi|443527187|ref|ZP_21093250.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-78A1]
gi|341638136|gb|EGS62790.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02A1]
gi|408013893|gb|EKG51580.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A1]
gi|408019323|gb|EKG56722.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-52A1]
gi|408024628|gb|EKG61723.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A1]
gi|408025295|gb|EKG62357.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55A1]
gi|408034500|gb|EKG70995.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A1]
gi|408056925|gb|EKG91795.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-51A1]
gi|408614575|gb|EKK87845.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1035(8)]
gi|408623354|gb|EKK96308.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-1A2]
gi|408635445|gb|EKL07637.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55C2]
gi|408642066|gb|EKL13823.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-60A1]
gi|408642945|gb|EKL14687.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59A1]
gi|408650526|gb|EKL21801.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A2]
gi|408853217|gb|EKL93014.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02C1]
gi|408860984|gb|EKM00587.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55B2]
gi|408868574|gb|EKM07897.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59B1]
gi|443454281|gb|ELT18085.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-78A1]
Length = 343
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQ 52
NG W DLW + ++ +++ R+V G ++ ++L L
Sbjct: 141 NGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEEEIKKAYESLVALKKN 200
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V L++ + G+ + + W+ + M + V+P+ GA LW D + IP+ S
Sbjct: 201 VLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS 260
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVK-----LPEELLKGKP 161
+ PL H++I F Q ++L + + K LP E L+ P
Sbjct: 261 K------------NIPLAHKFINFMYQPENQAEVVQSLGYASATKGGRALLPAE-LRDNP 307
Query: 162 SLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
++ P E + + EF+ + TL+ YE
Sbjct: 308 TI-------FPSDEDMKKGEFINDVGPETLAIYE 334
>gi|119483298|ref|ZP_01618712.1| extracellular solute-binding protein, family 1 [Lyngbya sp. PCC
8106]
gi|119458065|gb|EAW39187.1| extracellular solute-binding protein, family 1 [Lyngbya sp. PCC
8106]
Length = 367
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 48/207 (23%)
Query: 7 KDWKDLWLP--ELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQ 52
+DWK LW E++ R +++N REV+G T R A ++ LA L
Sbjct: 166 QDWKYLWEHQREISKRFTLLNDVREVMGATLRMLGYSYNSTDPQQIRQAYEK-LAELQPA 224
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
+ F + +GD+ +A+ +S+D + ++ + PKSG+SLW D IP +
Sbjct: 225 IASFTTDAWRPQIIVGDLLMAMCYSADAAEIMPENEDLRYITPKSGSSLWTDTLVIPKS- 283
Query: 113 RLETKQIGGRVRGPFPL-IHQWIEFCLQTARALPFNTRV-----------KLPEELLKGK 160
P P +QW+ F LQ A R+ KLP+ L+
Sbjct: 284 ------------APNPDGAYQWMNFMLQPEIAAQVVERLSFATPSQLAFRKLPKS-LRDD 330
Query: 161 PSLDTKLIAGVPPAEILARCEFLEPLS 187
P+L PP ++ R E L P+S
Sbjct: 331 PTL-------FPPESVIERSESLAPIS 350
>gi|373467045|ref|ZP_09558349.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sp. oral taxon 851 str. F0397]
gi|371759422|gb|EHO48155.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sp. oral taxon 851 str. F0397]
Length = 360
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 160 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 219
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP +
Sbjct: 220 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLDMVFPKEGPVLWVDTLAIPKTA-- 277
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 278 --KNPDG--------AHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDPAIY 327
Query: 172 PPAEILARCEFLEPLSEA 189
PPA++L + + + +A
Sbjct: 328 PPADVLKNSHWQDDVGDA 345
>gi|157369888|ref|YP_001477877.1| putrescine ABC transporter periplasmic-binding protein [Serratia
proteamaculans 568]
gi|157321652|gb|ABV40749.1| extracellular solute-binding protein family 1 [Serratia
proteamaculans 568]
Length = 369
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T AA +L L L +R F + Y+ G
Sbjct: 176 VSFLDAPSEVYATVLHYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GWS DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWSGDVMQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAK 286
>gi|418293170|ref|ZP_12905089.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064572|gb|EHY77315.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 361
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 39/206 (18%)
Query: 7 KDWKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLG 50
+ W ++ PE A + I+ ++S E+I +Q AA ++ L +
Sbjct: 150 ESWSVIFEPENAAKLASCGIAFLDSADEMIPAMLNYLGLDPNSQNAADYQKAEEKLLAVR 209
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWAD 104
VR F + Y+ G++ +A G+S DV A R +A +PK GA+LW D
Sbjct: 210 PHVRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGANLWFD 269
Query: 105 LWAIPA-ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL 163
+ AIPA +S +E H +I++ L+ + V LK +
Sbjct: 270 MLAIPADSSNVEQA-------------HAFIDYLLRPEVIAAVSDYVGYANPNLKAGELM 316
Query: 164 DTKL---IAGVPPAEILARCEFLEPL 186
D ++ + PP E+L R + L
Sbjct: 317 DQEVREDASVYPPQEVLDRLYVMAEL 342
>gi|333926484|ref|YP_004500063.1| family 1 extracellular solute-binding protein [Serratia sp. AS12]
gi|333931437|ref|YP_004505015.1| ABC transporter substrate-binding protein [Serratia plymuthica AS9]
gi|386328307|ref|YP_006024477.1| extracellular solute-binding protein [Serratia sp. AS13]
gi|333473044|gb|AEF44754.1| extracellular solute-binding protein family 1 [Serratia plymuthica
AS9]
gi|333490544|gb|AEF49706.1| extracellular solute-binding protein family 1 [Serratia sp. AS12]
gi|333960640|gb|AEG27413.1| extracellular solute-binding protein family 1 [Serratia sp. AS13]
Length = 369
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T AA +L L L +R F + Y+ G
Sbjct: 176 VSFLDAPSEVYATVLHYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GWS DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWSGDVMQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAK 286
>gi|416070630|ref|ZP_11583661.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|347998970|gb|EGY39854.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
Length = 393
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 193 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 252
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 253 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTS-- 310
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 311 --KNPDGA--------HKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDPAIY 360
Query: 172 PPAEILARCEFLEPLSEA 189
P AE+L + + + + +A
Sbjct: 361 PSAEVLQKSYWQDDVGDA 378
>gi|387121804|ref|YP_006287687.1| spermidine/putrescine-binding periplasmic protein 1
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|385876296|gb|AFI87855.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 393
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 193 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 252
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 253 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTS-- 310
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 311 --KNPDGA--------HKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDPAIY 360
Query: 172 PPAEILARCEFLEPLSEA 189
P AE+L + + + + +A
Sbjct: 361 PSAEVLQKSYWQDDVGDA 378
>gi|15601861|ref|NP_233492.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121585940|ref|ZP_01675733.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
2740-80]
gi|121728505|ref|ZP_01681529.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
V52]
gi|153212814|ref|ZP_01948450.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
1587]
gi|153801275|ref|ZP_01955861.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
MZO-3]
gi|153816688|ref|ZP_01969355.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
NCTC 8457]
gi|153821212|ref|ZP_01973879.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
B33]
gi|153827835|ref|ZP_01980502.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
623-39]
gi|227812675|ref|YP_002812685.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
M66-2]
gi|229506817|ref|ZP_04396326.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
cholerae BX 330286]
gi|229510388|ref|ZP_04399868.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae B33]
gi|229514518|ref|ZP_04403979.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TMA 21]
gi|229517481|ref|ZP_04406926.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC9]
gi|229528004|ref|ZP_04417395.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae 12129(1)]
gi|229605291|ref|YP_002875995.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae MJ-1236]
gi|254224635|ref|ZP_04918251.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
V51]
gi|254284731|ref|ZP_04959698.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
AM-19226]
gi|254850268|ref|ZP_05239618.1| spermidine/putrescine ABC transporter [Vibrio cholerae MO10]
gi|255746164|ref|ZP_05420111.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholera CIRS 101]
gi|262158653|ref|ZP_06029767.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae INDRE 91/1]
gi|262192301|ref|ZP_06050456.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae CT 5369-93]
gi|297579852|ref|ZP_06941779.1| spermidine/putrescine ABC transporter [Vibrio cholerae RC385]
gi|298499871|ref|ZP_07009677.1| spermidine/putrescine ABC transporter [Vibrio cholerae MAK 757]
gi|360038005|ref|YP_004939767.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O1 str. 2010EL-1786]
gi|379744487|ref|YP_005335539.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
IEC224]
gi|417812053|ref|ZP_12458714.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-49A2]
gi|417816647|ref|ZP_12463277.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HCUF01]
gi|417819582|ref|ZP_12466197.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE39]
gi|417822919|ref|ZP_12469517.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE48]
gi|418330651|ref|ZP_12941630.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-06A1]
gi|418337546|ref|ZP_12946441.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-23A1]
gi|418342192|ref|ZP_12949021.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-28A1]
gi|418349219|ref|ZP_12953951.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43A1]
gi|418353640|ref|ZP_12956365.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A1]
gi|419825948|ref|ZP_14349451.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1033(6)]
gi|421317308|ref|ZP_15767878.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1032(5)]
gi|421323930|ref|ZP_15774457.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1041(14)]
gi|421326900|ref|ZP_15777418.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1042(15)]
gi|421331989|ref|ZP_15782468.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1046(19)]
gi|421335622|ref|ZP_15786085.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1048(21)]
gi|421341430|ref|ZP_15791850.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-20A2]
gi|421345945|ref|ZP_15796329.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46A1]
gi|421349691|ref|ZP_15800060.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-25]
gi|422890025|ref|ZP_16932485.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-40A1]
gi|422899504|ref|ZP_16936216.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48A1]
gi|422904982|ref|ZP_16939869.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-70A1]
gi|422915324|ref|ZP_16949773.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HFU-02]
gi|422921232|ref|ZP_16954482.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae BJG-01]
gi|422927985|ref|ZP_16960929.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-38A1]
gi|423147058|ref|ZP_17134546.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-19A1]
gi|423148048|ref|ZP_17135426.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-21A1]
gi|423151833|ref|ZP_17139064.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-22A1]
gi|423158457|ref|ZP_17145470.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-32A1]
gi|423162262|ref|ZP_17149134.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-33A2]
gi|423163362|ref|ZP_17150178.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48B2]
gi|423733226|ref|ZP_17706467.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A1]
gi|423743369|ref|ZP_17710868.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A2]
gi|423910611|ref|ZP_17728599.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62A1]
gi|423919682|ref|ZP_17729512.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-77A1]
gi|423952923|ref|ZP_17734314.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-40]
gi|423981448|ref|ZP_17737678.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-46]
gi|424002295|ref|ZP_17745380.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A2]
gi|424004539|ref|ZP_17747545.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-37A1]
gi|424022471|ref|ZP_17762154.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62B1]
gi|424029250|ref|ZP_17768801.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-69A1]
gi|424588741|ref|ZP_18028237.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1030(3)]
gi|424590579|ref|ZP_18030015.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1037(10)]
gi|424593489|ref|ZP_18032848.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1040(13)]
gi|424597418|ref|ZP_18036635.1| bacterial extracellular solute-binding family protein [Vibrio
Cholerae CP1044(17)]
gi|424603159|ref|ZP_18042293.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1047(20)]
gi|424604995|ref|ZP_18043982.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1050(23)]
gi|424608821|ref|ZP_18047699.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-39A1]
gi|424615603|ref|ZP_18054319.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41A1]
gi|424619448|ref|ZP_18058053.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-42A1]
gi|424620361|ref|ZP_18058909.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-47A1]
gi|424642988|ref|ZP_18080766.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A2]
gi|424651102|ref|ZP_18088648.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A2]
gi|424654885|ref|ZP_18092203.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A2]
gi|429887818|ref|ZP_19369324.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae PS15]
gi|440711255|ref|ZP_20891896.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae 4260B]
gi|443505848|ref|ZP_21072735.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-64A1]
gi|443509756|ref|ZP_21076449.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-65A1]
gi|443513580|ref|ZP_21080150.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-67A1]
gi|443517413|ref|ZP_21083858.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-68A1]
gi|443521071|ref|ZP_21087402.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-71A1]
gi|443521975|ref|ZP_21088250.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-72A2]
gi|443530004|ref|ZP_21096021.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-7A1]
gi|443533700|ref|ZP_21099641.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-80A1]
gi|443537371|ref|ZP_21103229.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A1]
gi|449057568|ref|ZP_21735864.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae O1 str. Inaba G4222]
gi|9658560|gb|AAF97004.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121549876|gb|EAX59896.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
2740-80]
gi|121629223|gb|EAX61661.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
V52]
gi|124116327|gb|EAY35147.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
1587]
gi|124123190|gb|EAY41933.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
MZO-3]
gi|125622698|gb|EAZ51016.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
V51]
gi|126512707|gb|EAZ75301.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
NCTC 8457]
gi|126521271|gb|EAZ78494.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
B33]
gi|148876680|gb|EDL74815.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
623-39]
gi|150425516|gb|EDN17292.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
AM-19226]
gi|227011817|gb|ACP08028.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
M66-2]
gi|229334366|gb|EEN99851.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae 12129(1)]
gi|229345517|gb|EEO10490.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC9]
gi|229348498|gb|EEO13456.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TMA 21]
gi|229352833|gb|EEO17773.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae B33]
gi|229357168|gb|EEO22086.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
cholerae BX 330286]
gi|229371777|gb|ACQ62199.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae MJ-1236]
gi|254845973|gb|EET24387.1| spermidine/putrescine ABC transporter [Vibrio cholerae MO10]
gi|255735918|gb|EET91316.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholera CIRS 101]
gi|262029533|gb|EEY48183.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae INDRE 91/1]
gi|262031794|gb|EEY50377.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae CT 5369-93]
gi|297535498|gb|EFH74332.1| spermidine/putrescine ABC transporter [Vibrio cholerae RC385]
gi|297541852|gb|EFH77903.1| spermidine/putrescine ABC transporter [Vibrio cholerae MAK 757]
gi|340039797|gb|EGR00770.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HCUF01]
gi|340040440|gb|EGR01412.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE39]
gi|340044873|gb|EGR05821.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-49A2]
gi|340049049|gb|EGR09965.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE48]
gi|341627361|gb|EGS52678.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-70A1]
gi|341628863|gb|EGS54056.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48A1]
gi|341628994|gb|EGS54178.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-40A1]
gi|341632302|gb|EGS57173.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HFU-02]
gi|341642870|gb|EGS67170.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-38A1]
gi|341649542|gb|EGS73510.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae BJG-01]
gi|356416981|gb|EHH70601.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-19A1]
gi|356423906|gb|EHH77334.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-06A1]
gi|356424646|gb|EHH78048.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-21A1]
gi|356430930|gb|EHH84135.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-23A1]
gi|356435420|gb|EHH88576.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-32A1]
gi|356437028|gb|EHH90138.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-22A1]
gi|356439650|gb|EHH92617.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-28A1]
gi|356440748|gb|EHH93686.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-33A2]
gi|356446081|gb|EHH98881.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43A1]
gi|356454705|gb|EHI07352.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A1]
gi|356456994|gb|EHI09570.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48B2]
gi|356649159|gb|AET29213.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O1 str. 2010EL-1786]
gi|378797081|gb|AFC60551.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
IEC224]
gi|395919766|gb|EJH30589.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1032(5)]
gi|395921944|gb|EJH32763.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1041(14)]
gi|395930787|gb|EJH41533.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1046(19)]
gi|395933825|gb|EJH44564.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1042(15)]
gi|395935304|gb|EJH46039.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1048(21)]
gi|395937262|gb|EJH47982.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-20A2]
gi|395947472|gb|EJH58127.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46A1]
gi|395950778|gb|EJH61394.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-42A1]
gi|395956308|gb|EJH66902.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-25]
gi|395965920|gb|EJH76058.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A2]
gi|395966528|gb|EJH76647.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A2]
gi|395968101|gb|EJH78091.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1030(3)]
gi|395973397|gb|EJH82958.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1047(20)]
gi|395977877|gb|EJH87271.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-47A1]
gi|408005613|gb|EKG43812.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41A1]
gi|408011780|gb|EKG49583.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-39A1]
gi|408034337|gb|EKG70840.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1037(10)]
gi|408039155|gb|EKG75449.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1040(13)]
gi|408046209|gb|EKG81910.1| bacterial extracellular solute-binding family protein [Vibrio
Cholerae CP1044(17)]
gi|408048133|gb|EKG83590.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1050(23)]
gi|408058880|gb|EKG93659.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A2]
gi|408608738|gb|EKK82121.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1033(6)]
gi|408615804|gb|EKK88979.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A1]
gi|408645801|gb|EKL17435.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A2]
gi|408649720|gb|EKL21033.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62A1]
gi|408659668|gb|EKL30703.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-40]
gi|408661555|gb|EKL32540.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-77A1]
gi|408665384|gb|EKL36200.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-46]
gi|408847776|gb|EKL87837.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A2]
gi|408850875|gb|EKL90818.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-37A1]
gi|408872205|gb|EKM11428.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-69A1]
gi|408876720|gb|EKM15830.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62B1]
gi|429225135|gb|EKY31411.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae PS15]
gi|439972742|gb|ELP48985.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae 4260B]
gi|443429830|gb|ELS72453.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-64A1]
gi|443433792|gb|ELS80006.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-65A1]
gi|443437751|gb|ELS87534.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-67A1]
gi|443441572|gb|ELS94940.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-68A1]
gi|443445504|gb|ELT02225.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-71A1]
gi|443452118|gb|ELT12347.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-72A2]
gi|443459574|gb|ELT26968.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-7A1]
gi|443463176|gb|ELT34186.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-80A1]
gi|443467380|gb|ELT42036.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A1]
gi|448263177|gb|EMB00424.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae O1 str. Inaba G4222]
Length = 343
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQ 52
NG W DLW + ++ +++ R+V G ++ ++L L
Sbjct: 141 NGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEEEIKKAYESLVALKKN 200
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V L++ + G+ + + W+ + M + V+P+ GA LW D + IP+ S
Sbjct: 201 VLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS 260
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVK-----LPEELLKGKP 161
+ PL H++I F Q ++L + + K LP E L+ P
Sbjct: 261 K------------NIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLPAE-LRDNP 307
Query: 162 SLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
++ P E + + EF+ + TL+ YE
Sbjct: 308 TI-------FPSDEDMKKGEFINDVGPETLAIYE 334
>gi|429734884|ref|ZP_19268883.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Aggregatibacter actinomycetemcomitans Y4]
gi|444333997|ref|ZP_21149643.1| spermidine/putrescine-binding periplasmic protein [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|429150939|gb|EKX93829.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Aggregatibacter actinomycetemcomitans Y4]
gi|443551003|gb|ELT59061.1| spermidine/putrescine-binding periplasmic protein [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 380
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 180 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 239
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 240 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTS-- 297
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 298 --KNPDG--------AHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDPAIY 347
Query: 172 PPAEILARCEFLEPLSEA 189
P AE+L + + + + +A
Sbjct: 348 PSAEVLQKSYWQDDVGDA 365
>gi|386825143|ref|ZP_10112270.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia plymuthica PRI-2C]
gi|386378000|gb|EIJ18810.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia plymuthica PRI-2C]
Length = 369
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T AA +L L L +R F + Y+ G
Sbjct: 176 VSFLDAPSEIYATVLHYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GWS DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWSGDVMQAANRAKEAKNGVNVAYTIPKEGALTYFDMFAMPADAK 286
>gi|167856594|ref|ZP_02479296.1| PotD [Haemophilus parasuis 29755]
gi|167852275|gb|EDS23587.1| PotD [Haemophilus parasuis 29755]
Length = 277
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 5 GFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQV 53
F+ W DLW PE + +++ PRE TQ A A + L L +
Sbjct: 76 NFQSWADLWKPEFKDTLQLLDDPREAFNIALLKMGQDPNTQDPAILKAAYEELLKLCPNI 135
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F+ + F G+V I W+ V A + + +V PK G LW D AIPA S+
Sbjct: 136 LAFNSDNPSSSFISGEVEIGTLWNGSVRIAKNEGAKINMVYPKEGTPLWIDNLAIPATSQ 195
>gi|343519595|ref|ZP_08756575.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
pittmaniae HK 85]
gi|343392665|gb|EGV05230.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
pittmaniae HK 85]
Length = 361
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 80/198 (40%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV T+ A + L L V
Sbjct: 161 FTAWGDLWKPEFANKVQLLDDAREVFNIALLKLGQDPNTKDPAIIKQAYEELLKLRPNVL 220
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP+ S
Sbjct: 221 AFNSDNPANAFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPSTS-- 278
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 279 --KNPDG--------AHKLINYMLGKKAAEKLTLAIGYPTSNLEAKKALPKEITEDPAIY 328
Query: 172 PPAEILARCEFLEPLSEA 189
P AEIL + + + + +A
Sbjct: 329 PTAEILQKSYWQDDVGDA 346
>gi|329123532|ref|ZP_08252095.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus aegyptius ATCC
11116]
gi|327470348|gb|EGF15806.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus aegyptius ATCC
11116]
Length = 379
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 179 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 238
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIPA ++
Sbjct: 239 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLNMVFPKEGPVLWVDTLAIPATAK- 297
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
G H+ I + L A + P ++ K +L ++ A
Sbjct: 298 -------NSEG----AHKLINYMLGKKTAEKLTLAIGYPTSNIEAKKALPKEITEDPAIY 346
Query: 172 PPAEILARCEFLEPLSEA 189
P A+IL + + + +A
Sbjct: 347 PSADILKNSHWQDDVGDA 364
>gi|384423359|ref|YP_005632718.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae LMA3984-4]
gi|327486067|gb|AEA80473.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae LMA3984-4]
Length = 343
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQ 52
NG W DLW + ++ +++ R+V G ++ ++L L
Sbjct: 141 NGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEEEIKKAYESLVALKKN 200
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V L++ + G+ + + W+ + M + V+P+ GA LW D + IP+ S
Sbjct: 201 VLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS 260
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVK-----LPEELLKGKP 161
+ PL H++I F Q ++L + + K LP E L+ P
Sbjct: 261 K------------NIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLPAE-LRDNP 307
Query: 162 SLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
++ P E + + EF+ + TL+ YE
Sbjct: 308 TI-------FPSDEDMKKGEFINDVGPETLAIYE 334
>gi|416033238|ref|ZP_11573007.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|416043467|ref|ZP_11574567.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|416060515|ref|ZP_11580897.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|347997183|gb|EGY38210.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347998330|gb|EGY39261.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|347999186|gb|EGY40039.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
Length = 365
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 165 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 224
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 225 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTS-- 282
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 283 --KNPDG--------AHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDPAIY 332
Query: 172 PPAEILARCEFLEPLSEA 189
P AE+L + + + + +A
Sbjct: 333 PSAEVLQKSYWQDDVGDA 350
>gi|260774066|ref|ZP_05882981.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio metschnikovii CIP 69.14]
gi|260611027|gb|EEX36231.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio metschnikovii CIP 69.14]
Length = 344
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 79/206 (38%), Gaps = 26/206 (12%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQ 52
NG W DLW P+ ++ +++ R+V G TQ A Q+L L
Sbjct: 142 NGISRWADLWDPKYVRQVMLIDDMRDVFGMALKLNGFSINTQNEAEIEKAYQSLVALKRN 201
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V L++ + G+V + + W+ + + + + V+P+ GA LW D + IP+ S
Sbjct: 202 VLLYNSDAPHVPYVSGEVALGMQWNGNAFQGQEELPELTFVMPEEGAVLWMDNFTIPSGS 261
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG-- 170
+ L H++I F Q + G+ L +L
Sbjct: 262 NNKA------------LAHKFINFMYQAENQAEIVNSLGYASATQSGRALLADELRNNPS 309
Query: 171 -VPPAEILARCEFLEPLSEATLSDYE 195
P E + + EF+ + L YE
Sbjct: 310 IFPSDEEMQKGEFINDVGPEALVIYE 335
>gi|417844144|ref|ZP_12490206.1| Spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
haemolyticus M21127]
gi|341947695|gb|EGT74338.1| Spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
haemolyticus M21127]
Length = 360
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L +
Sbjct: 160 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNIL 219
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP +
Sbjct: 220 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLDMVFPKEGPVLWVDTLAIPKTA-- 277
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 278 --KNPDG--------AHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDPAIY 327
Query: 172 PPAEILARCEFLEPLSEA 189
PPA++L + + + +A
Sbjct: 328 PPADVLKNSHWQDDVGDA 345
>gi|145632913|ref|ZP_01788646.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 3655]
gi|148825884|ref|YP_001290637.1| ABC transporter ATPase [Haemophilus influenzae PittEE]
gi|229846804|ref|ZP_04466911.1| ABC transporter ATPase component [Haemophilus influenzae 7P49H1]
gi|144986569|gb|EDJ93135.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 3655]
gi|148716044|gb|ABQ98254.1| ABC transporter ATPase component [Haemophilus influenzae PittEE]
gi|229810293|gb|EEP46012.1| ABC transporter ATPase component [Haemophilus influenzae 7P49H1]
Length = 360
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 160 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 219
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIPA ++
Sbjct: 220 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLNMVFPKEGPVLWVDTLAIPATAK- 278
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
G H+ I + L A + P ++ K +L ++ A
Sbjct: 279 -------NSEG----AHKLINYMLGKKTAEKLTLAIGYPTSNIEAKKALPKEITEDPAIY 327
Query: 172 PPAEILARCEFLEPLSEA 189
P A+IL + + + +A
Sbjct: 328 PSADILKNSHWQDDVGDA 345
>gi|145629582|ref|ZP_01785380.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 22.1-21]
gi|1172560|sp|P45168.1|POTD1_HAEIN RecName: Full=Spermidine/putrescine-binding periplasmic protein 1;
Short=SPBP; Flags: Precursor
gi|144978425|gb|EDJ88189.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 22.1-21]
Length = 360
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 160 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 219
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIPA ++
Sbjct: 220 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLNMVFPKEGPVLWVDTLAIPATAK- 278
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
G H+ I + L A + P ++ K +L ++ A
Sbjct: 279 -------NSEG----AHKLINYMLGKKTAEKLTLAIGYPTSNIEAKKALPKEITEDPAIY 327
Query: 172 PPAEILARCEFLEPLSEA 189
P A+IL + + + +A
Sbjct: 328 PSADILKNSHWQDDVGDA 345
>gi|16273254|ref|NP_439495.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae Rd KW20]
gi|145636049|ref|ZP_01791719.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittHH]
gi|260580823|ref|ZP_05848649.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae RdAW]
gi|1574803|gb|AAC22988.1| spermidine/putrescine ABC transporter, periplasmic-binding protein
(potD) [Haemophilus influenzae Rd KW20]
gi|145270571|gb|EDK10504.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittHH]
gi|260092640|gb|EEW76577.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae RdAW]
Length = 379
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 179 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 238
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIPA ++
Sbjct: 239 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLNMVFPKEGPVLWVDTLAIPATAK- 297
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
G H+ I + L A + P ++ K +L ++ A
Sbjct: 298 -------NSEG----AHKLINYMLGKKTAEKLTLAIGYPTSNIEAKKALPKEITEDPAIY 346
Query: 172 PPAEILARCEFLEPLSEA 189
P A+IL + + + +A
Sbjct: 347 PSADILKNSHWQDDVGDA 364
>gi|421319887|ref|ZP_15770445.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1038(11)]
gi|395924775|gb|EJH35577.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1038(11)]
Length = 336
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQ 52
NG W DLW + ++ +++ R+V G ++ ++L L
Sbjct: 134 NGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEEEIKKAYESLVALKKN 193
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V L++ + G+ + + W+ + M + V+P+ GA LW D + IP+ S
Sbjct: 194 VLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS 253
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVK-----LPEELLKGKP 161
+ PL H++I F Q ++L + + K LP E L+ P
Sbjct: 254 K------------NIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLPAE-LRDNP 300
Query: 162 SLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
++ P E + + EF+ + TL+ YE
Sbjct: 301 TI-------FPSDEDMKKGEFINDVGPETLAIYE 327
>gi|319776374|ref|YP_004138862.1| bacterial extracellular solute-binding protein, family 1
[Haemophilus influenzae F3047]
gi|317450965|emb|CBY87192.1| Bacterial extracellular solute-binding protein, family 1
[Haemophilus influenzae F3047]
Length = 379
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 179 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 238
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIPA ++
Sbjct: 239 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLDMVFPKEGPVLWVDTLAIPATAK- 297
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
G H+ I + L A + P ++ K +L ++ A
Sbjct: 298 -------NSEG----AHKLINYMLGKKTAEKLTLAIGYPTSNIEAKKALPKEITEDPAIY 346
Query: 172 PPAEILARCEFLEPLSEA 189
P A+IL + + + +A
Sbjct: 347 PSADILKNSHWQDDVGDA 364
>gi|402814635|ref|ZP_10864229.1| spermidine/putrescine-binding periplasmic protein 2 [Paenibacillus
alvei DSM 29]
gi|402508482|gb|EJW19003.1| spermidine/putrescine-binding periplasmic protein 2 [Paenibacillus
alvei DSM 29]
Length = 348
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 32/193 (16%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIGTQ-AAAGRIAVQQNLALLGNQVR----------LF 56
DW DLW E G++ +++ RE+IG AG+ +N A + V F
Sbjct: 150 DWADLWKDEYKGKVLLLDDNREIIGMALKKAGKSNSSENEADINAAVDDLRKLVPNVLAF 209
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
D + + + WI WS D +VA ++PK+G+++++D +AIP S+ +
Sbjct: 210 DTDNIKQKMIAEEGWIGTVWSGDASVIHGENPDVAFMIPKTGSTIFSDNYAIPKGSKNK- 268
Query: 117 KQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLIAG 170
L ++I F L + ++ ++ V +E K LD K+I
Sbjct: 269 -----------ELAQKFINFMLDPENSAKNYESIGYSNPVTKAKE-FHSKEYLDNKMIN- 315
Query: 171 VPPAEILARCEFL 183
+ L R E+L
Sbjct: 316 -LSDDELTRTEWL 327
>gi|229526354|ref|ZP_04415758.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae bv. albensis VL426]
gi|422910303|ref|ZP_16944943.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-09]
gi|424660148|ref|ZP_18097396.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-16]
gi|229336512|gb|EEO01530.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae bv. albensis VL426]
gi|341633624|gb|EGS58420.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-09]
gi|408051055|gb|EKG86173.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-16]
Length = 343
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 42/214 (19%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQ 52
NG W DLW + ++ +++ R+V G ++ ++L L
Sbjct: 141 NGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEEEIKKAYESLVALKKN 200
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V L++ + G+ + + W+ + M+ + V+P+ GA LW D + IP+ S
Sbjct: 201 VLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMAELKFVMPEEGAVLWMDNFTIPSGS 260
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVK-----LPEELLKGKP 161
+ PL H++I F Q + L + + K LP E L+ P
Sbjct: 261 K------------NIPLAHKFINFMYQPENQAEIVQTLGYASATKGGRAILPAE-LRDNP 307
Query: 162 SLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
++ P E + + EF + TL+ YE
Sbjct: 308 TI-------FPSDEDMKKGEFTNDVGPETLAIYE 334
>gi|113461303|ref|YP_719372.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
gi|112823346|gb|ABI25435.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
Length = 361
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE AG++ +++ REV TQ + L L V
Sbjct: 161 FTSWADLWKPEFAGKVQLLDDAREVFNIALLKLGQDPNTQDPKIIEQAYEELLKLRPNVL 220
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V I W+ V A K + + +V PK G LW D AIP+ S
Sbjct: 221 SFNSDNPANSFISGEVSIGQLWNGSVRIAKKEKAPLDMVFPKEGPVLWVDTLAIPSTS-- 278
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKG---KPSLDTKLIAGV 171
+ P H+ I + L A + P +K P+ T+ A
Sbjct: 279 ---------KNP-DAAHKLINYMLGAKTAAQLTLEIGYPTSNIKALELLPAEITQDPAIY 328
Query: 172 PPAEILARCEFLEPLSEA 189
P AEIL + + + +A
Sbjct: 329 PTAEILQNSYWQDDVGDA 346
>gi|90021014|ref|YP_526841.1| transcription factor jumonji, jmjC [Saccharophagus degradans 2-40]
gi|89950614|gb|ABD80629.1| extracellular solute-binding protein, family 1 [Saccharophagus
degradans 2-40]
Length = 365
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 22/123 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREV-------IGTQAAAGRIAVQQNLALL----GNQ 52
W ++ PE+AG+ IS+++ EV +G A+ A Q+ +A L
Sbjct: 156 WALIFNPEIAGKLASCGISLMDDATEVFAAAKIYLGIDASDFSKATQEAVAALVAKTRKN 215
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+R F + Y+ GD+ +A G+S DVL A R NVA VP+ GA +W+D+
Sbjct: 216 IRYFHSSQYINDLANGDLCVAHGYSGDVLQARARAEEAEKGVNVAYTVPQEGAVVWSDVM 275
Query: 107 AIP 109
IP
Sbjct: 276 VIP 278
>gi|374855306|dbj|BAL58166.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
Length = 352
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 30/199 (15%)
Query: 9 WKDLWLPE----LAGRISMVNSPREVIG----------TQAAAGRIAVQQNLALLGN-QV 53
W DL+ P+ R+SM++ PRE IG ++ +NL L+ +
Sbjct: 152 WADLFEPDRLERYKNRVSMLDDPREAIGAALKYLGYSVNSTDPQQLEAAKNLLLVQKPYL 211
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+D Y GD+ +A GWS + A N+ V+P+ G +WAD AI +S+
Sbjct: 212 ARYDSETYDDFLLTGDLVVAHGWSGEFAKAHVENPNIRYVIPREGGVIWADNLAILKSSQ 271
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AG 170
L H +I+F L+ ++ P + +++ A
Sbjct: 272 R------------IDLAHTFIDFLLRPTINAKIVNFLRYPSTNEAATAHILPEIVNDPAI 319
Query: 171 VPPAEILARCEFLEPLSEA 189
PP EIL + E++ + +A
Sbjct: 320 YPPEEILEKLEWIRDVGDA 338
>gi|46143264|ref|ZP_00204425.1| COG0687: Spermidine/putrescine-binding periplasmic protein
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
Length = 259
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 26/200 (13%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQ 52
+ F W DLW PE A ++ +++ REV T A + L L
Sbjct: 57 DAFTSWGDLWKPEFANKVQLLDDAREVFNIALLKLGKNPNTTNPEEIKAAYEELRKLRPN 116
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V F + F G+V + W+ V A K + V +V PK G LW D AIPA +
Sbjct: 117 VLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKEQAPVNMVFPKEGPVLWVDTLAIPANA 176
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE---ELLKGKPSLDTKLIA 169
+ + H+ I + L A + P E LK P T+ A
Sbjct: 177 KNKEN------------AHKLINYLLSAPVAEKLTLEIGYPTSNVEALKTLPKEITEDPA 224
Query: 170 GVPPAEILARCEFLEPLSEA 189
P A++L ++ + + A
Sbjct: 225 IYPTADVLKAAQWQDDVGNA 244
>gi|310659049|ref|YP_003936770.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [[Clostridium] sticklandii]
gi|308825827|emb|CBH21865.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [[Clostridium] sticklandii]
Length = 345
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W LW P+ G+I M++SPR+ IG T+ A +Q L VR ++
Sbjct: 149 WDILWNPKYEGQIIMLDSPRDTIGITLKKLGYSLNTKNPAELEEAKQALIEQKKLVRSYE 208
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
Y G+ +++ WS D + + ++A +PK G +LW D AIP +
Sbjct: 209 VDTYKGQMIAGEAAMSLAWSGDAMLLMSENEDLAYAIPKEGTNLWFDCMAIPTTA 263
>gi|260769730|ref|ZP_05878663.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio furnissii CIP 102972]
gi|375133100|ref|YP_005049508.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio furnissii
NCTC 11218]
gi|260615068|gb|EEX40254.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio furnissii CIP 102972]
gi|315182275|gb|ADT89188.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio furnissii
NCTC 11218]
Length = 344
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 79/205 (38%), Gaps = 26/205 (12%)
Query: 5 GFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQV 53
G WKDLW + A ++ +++ R+V G ++ Q+LA L + V
Sbjct: 143 GITQWKDLWNSKYAQQVMLIDDIRDVFGMALKLNGYSINTKNEKEIEQAYQSLAALKDNV 202
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
L++ + G+ + + W+ + + M + V+P GA LW D + IP+ S
Sbjct: 203 LLYNSDAPHVPYVSGEASLGMQWNGNAYQGQQEMPELKFVMPAEGAVLWMDNFTIPSGSE 262
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGV-- 171
+ L H++I F Q + G+ L L
Sbjct: 263 HKA------------LAHKFINFMYQPENQAEIVNSLGYASATKSGRALLPEALRNNATI 310
Query: 172 -PPAEILARCEFLEPLSEATLSDYE 195
P E +A+ EF+ + L+ YE
Sbjct: 311 FPAEEDMAKGEFINDVGPQALAIYE 335
>gi|339452207|ref|ZP_08655577.1| extracellular solute-binding protein family 1 [Leuconostoc lactis
KCTC 3528]
Length = 218
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 85/214 (39%), Gaps = 32/214 (14%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W LW P+ ++ ++++PRE IG A A ++ LA L V+
Sbjct: 12 FDTWAKLWAPKTKDQVMLIDAPRESIGMGLQALGYSENDHDPAHIQAAREKLAALARNVK 71
Query: 55 --LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
L D G +V +A +D A+ ++ V+PK G S+W D +IP +
Sbjct: 72 AVLNDEIRAYVTSGEANVAVAYSGVADYAHAIN--PDIDYVIPKDGGSVWTDNMSIPKNA 129
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG-- 170
+ + G + +I F L A V L K L ++ +
Sbjct: 130 Q---NKAGA---------YAFINFLLDPKNAAQNAEYVAYSSPNLAAKKYLSKEITSDKI 177
Query: 171 -VPPAEILARCEFLEPLSEATLSDY--EWLVANL 201
P LA+ E E L++ T+ DY WL A +
Sbjct: 178 LYPQRSKLAKVEHYENLTDKTVQDYSNNWLEAKM 211
>gi|428306605|ref|YP_007143430.1| extracellular solute-binding protein [Crinalium epipsammum PCC
9333]
gi|428248140|gb|AFZ13920.1| extracellular solute-binding protein family 1 [Crinalium epipsammum
PCC 9333]
Length = 376
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 88/217 (40%), Gaps = 44/217 (20%)
Query: 3 ENGFKDWKDLW--LPELAGRISMVNSPREVIGTQ-----AAAGRIAVQQ------NLALL 49
+N +DW LW +L+ ++++ N REV+G + QQ LA L
Sbjct: 171 KNQPQDWNYLWDQQKQLSRKMTLQNDLREVMGATLKMLGYSYNSTDPQQIKQAYEKLAQL 230
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
+ F + GD+ +A+ SSD + N+ V+P+SG+SLW D IP
Sbjct: 231 KPSIASFTSDAWRSQILTGDLLVAMCVSSDANDLIPEAENLQYVLPRSGSSLWTDTLVIP 290
Query: 110 AASRLETKQIGGRVRGPFP-LIHQWIEFCLQ------TARALPFNTRVKLPEELL----K 158
+ P P + WI + LQ + L F T K+ LL +
Sbjct: 291 KTA-------------PNPEAAYAWINYMLQPEVTAAICQRLSFATPNKVAFNLLPPDVR 337
Query: 159 GKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
P L PP +LA+CE + PL + YE
Sbjct: 338 DNPVL-------FPPESLLAKCEGIAPLPDKVKEIYE 367
>gi|190149659|ref|YP_001968184.1| spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307260842|ref|ZP_07542528.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307262967|ref|ZP_07544589.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189914790|gb|ACE61042.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|306869409|gb|EFN01200.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306871593|gb|EFN03315.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 360
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 79/200 (39%), Gaps = 26/200 (13%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREV-------IGTQAAAGRI----AVQQNLALLGNQ 52
+ F W DLW PE A ++ +++ REV +G + A + L L
Sbjct: 158 DAFTSWGDLWKPEFANKVQLLDDAREVFNIALLKLGKNPNTTNLEEIKAAYEELRKLRPN 217
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V F + F G+V + W+ V A K + V +V PK G LW D AIPA +
Sbjct: 218 VLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKEQAPVNMVFPKEGPVLWVDTLAIPANA 277
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE---ELLKGKPSLDTKLIA 169
+ + H+ I + L A + P E LK P T+ A
Sbjct: 278 KNKEN------------AHKLINYLLSAPVAEKLTLEIGYPTSNVEALKTLPKEITEDPA 325
Query: 170 GVPPAEILARCEFLEPLSEA 189
P A++L ++ + + A
Sbjct: 326 IYPTADVLKAAQWQDDVGNA 345
>gi|271963417|ref|YP_003337613.1| spermidine/putrescine-binding periplasmic protein-like protein
[Streptosporangium roseum DSM 43021]
gi|270506592|gb|ACZ84870.1| Spermidine/putrescine-binding periplasmic protein-like protein
[Streptosporangium roseum DSM 43021]
Length = 413
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 10 KDLWLPELAGRISMVNSPREVIG-------------TQA----AAGRIAVQQNLALLGNQ 52
+DLW P+ G++ M+ +EV T+A A ++ Q++ L
Sbjct: 201 QDLWNPKYKGKVGMMLDTQEVANFGMFSLGIDPDKSTEADWRKAGEKLKAQRDAGL---- 256
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
VR + Y+ GDVWI + WS D+ V ++ VVP+ G ++W D IP +
Sbjct: 257 VRKYYENDYVDALVRGDVWITMAWSGDIFQQVAEGKDLKFVVPEEGGTIWTDNMCIPKTA 316
Query: 113 R 113
+
Sbjct: 317 Q 317
>gi|237809505|ref|YP_002893945.1| extracellular solute-binding protein [Tolumonas auensis DSM 9187]
gi|237501766|gb|ACQ94359.1| extracellular solute-binding protein family 1 [Tolumonas auensis
DSM 9187]
Length = 366
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 22/127 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVIGTQ-AAAGRIAVQQN----------LALLGNQ 52
W ++ PE + +S +N+P E++ T G+ N L+ L
Sbjct: 157 WDAVFKPENLAKLKKCGVSFLNAPTEIMATALHYMGKDPNSTNPADYREAGKLLSTLRPH 216
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM----SNVAV--VVPKSGASLWADLW 106
+ F + Y+ GD+ +A+GWS DV+ A R +NV V V+PK GA ++ D+
Sbjct: 217 ISYFHSSQYINDLANGDICVAIGWSGDVMQAAARAEEAKNNVTVDYVIPKEGALVFYDML 276
Query: 107 AIPAASR 113
AIPA S+
Sbjct: 277 AIPADSK 283
>gi|319896999|ref|YP_004135194.1| bacterial extracellular solute-binding protein, family 1
[Haemophilus influenzae F3031]
gi|317432503|emb|CBY80861.1| Bacterial extracellular solute-binding protein,family 1
[Haemophilus influenzae F3031]
Length = 379
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 179 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 238
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIPA ++
Sbjct: 239 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLNMVFPKEGPVLWVDTLAIPATAK- 297
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
G H+ I + L A + P ++ K +L ++ A
Sbjct: 298 -------NSEG----AHKLINYMLGKKTAEKLTLAIGYPTSNIEAKKALPKEITEDPAIY 346
Query: 172 PPAEILARCEFLEPLSEA 189
P A++L + + + +A
Sbjct: 347 PSADVLKNSHWQDDVGDA 364
>gi|170717837|ref|YP_001784897.1| extracellular solute-binding protein [Haemophilus somnus 2336]
gi|168825966|gb|ACA31337.1| extracellular solute-binding protein family 1 [Haemophilus somnus
2336]
Length = 361
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 78/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE AG++ +++ REV TQ + L L V
Sbjct: 161 FTSWADLWKPEFAGKVQLLDDAREVFNIALLKLGQDPNTQDPKIIEQAYEELLKLRPNVL 220
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V I W+ V A K + + +V PK G LW D AIP+ S
Sbjct: 221 SFNSDNPANSFISGEVSIGQLWNGSVRIAKKEKAPLDMVFPKEGPVLWVDTLAIPSTS-- 278
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKG---KPSLDTKLIAGV 171
+ P H+ I + L A + P +K P+ T+ A
Sbjct: 279 ---------KNP-DAAHKLINYMLGAKTAAQLTLEIGYPTSNIKALELLPAEITQDPAIY 328
Query: 172 PPAEILARCEFLEPLSEA 189
P AE+L + + + +A
Sbjct: 329 PTAEVLQNSYWQDDVGDA 346
>gi|372269532|ref|ZP_09505580.1| transcription factor jumonji, jmjC [Marinobacterium stanieri S30]
Length = 363
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 22/124 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI-------GTQA----AAGRIAVQQNLALLGNQ 52
W+ L+ PE+ + +++++ P EV+ G A AG + +A +
Sbjct: 154 WRLLFDPEIVAKLASCGVTLMDDPTEVLVAANIYRGANADDFSKAGIAGASETVAAVRPH 213
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+R F + Y+ GD+ +A G+S DVL A R + +A VP GA +W D+
Sbjct: 214 IRYFHSSQYINDLANGDICVAHGYSGDVLQARDRAAEAGNGVEIAYAVPSEGALVWTDVM 273
Query: 107 AIPA 110
AIPA
Sbjct: 274 AIPA 277
>gi|317485961|ref|ZP_07944816.1| bacterial extracellular solute-binding protein [Bilophila
wadsworthia 3_1_6]
gi|316922734|gb|EFV43965.1| bacterial extracellular solute-binding protein [Bilophila
wadsworthia 3_1_6]
Length = 345
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-----------LALLGNQVRL 55
K WKDL PE GR+ + + R+ G A ++ L L VR+
Sbjct: 146 KSWKDLARPEFKGRVLLSDDLRDTFGVGLKACGYSINSTNPDEIKAAYEWLKALKPSVRV 205
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
FD T + F +V + W+ D A++ ++ +VP+ G +W D +AIPA +
Sbjct: 206 FDVTATKQAFISEEVVAGLAWNGDAFIAMQENPDLEFIVPEEGMLIWLDNFAIPAGAE 263
>gi|172058529|ref|YP_001814989.1| extracellular solute-binding protein [Exiguobacterium sibiricum
255-15]
gi|171991050|gb|ACB61972.1| extracellular solute-binding protein family 1 [Exiguobacterium
sibiricum 255-15]
Length = 357
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 48/214 (22%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGT------------------QAAAGRIAVQQNL-ALL 49
WKD+W P L +I + + REV+G +A A + + N+ A++
Sbjct: 158 WKDIWDPALKNQILLADGAREVMGMSLNSLGYSLNETDETKLQEAKANLMDLTPNVKAIV 217
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G++++L + + I V WS D + N+ V+PK G+++W D IP
Sbjct: 218 GDEIKL--------LLANEEAGIGVVWSGDANEIMSENENLNYVIPKEGSNVWFDNVVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSL 163
++ V+G H++I F L + A + ++T K +LL
Sbjct: 270 KTAK--------NVKGA----HEFINFMLDPKNAAKNADYVGYSTPNKAALKLLDRDVRE 317
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
D + P E+ E E L + L+ Y L
Sbjct: 318 DKRF---YPDKEVTDTLEVYENLGKEMLAHYNEL 348
>gi|345887621|ref|ZP_08838790.1| hypothetical protein HMPREF0178_01564 [Bilophila sp. 4_1_30]
gi|345041620|gb|EGW45761.1| hypothetical protein HMPREF0178_01564 [Bilophila sp. 4_1_30]
Length = 345
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-----------LALLGNQVRL 55
K WKDL PE GR+ + + R+ G A ++ L L VR+
Sbjct: 146 KSWKDLARPEFKGRVLLSDDLRDTFGVGLKACGYSINSTNPDEIKAAYEWLKALKPSVRV 205
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
FD T + F +V + W+ D A++ ++ +VP+ G +W D +AIPA +
Sbjct: 206 FDVTATKQAFISEEVVAGLAWNGDAFIAMQENPDLEFIVPEEGMLIWLDNFAIPAGAE 263
>gi|386817903|ref|ZP_10105121.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
gi|386422479|gb|EIJ36314.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
Length = 343
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 44/197 (22%)
Query: 9 WKDLWLPELAGRISMVNSPREVI------------GTQAAAGRIAVQQNLALLGNQVRLF 56
W DLW P+ G++ + + R + T ++A Q L+ N VR+F
Sbjct: 146 WADLWEPKWKGKLLLTDDLRGIFDMALKKNGFSSNSTNPEEIKVAYQDLQKLMPN-VRVF 204
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + F GDV + + WS + A K ++ + PK GASLW D AI A +
Sbjct: 205 NADAPREPFLAGDVNLGMIWSGEASQAQKENKDIHYIYPKEGASLWVDNLAITAGAENVD 264
Query: 117 KQIGGRVRGPFPLIHQWIEFCL------QTARALPFNT-----RVKLPEELLKGKPSLDT 165
H++I++ L Q L ++T RV L E ++ P +
Sbjct: 265 NA------------HKFIDYMLRPKVAKQMVEKLGYSTPNTAARV-LVSEAIRNDPII-- 309
Query: 166 KLIAGVPPAEILARCEF 182
PPAEIL + EF
Sbjct: 310 -----FPPAEILEKGEF 321
>gi|357049604|ref|ZP_09110823.1| hypothetical protein HMPREF9478_00806 [Enterococcus saccharolyticus
30_1]
gi|355383069|gb|EHG30156.1| hypothetical protein HMPREF9478_00806 [Enterococcus saccharolyticus
30_1]
Length = 359
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 28/204 (13%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDR---------- 58
W DLW PE A I +V+ RE +G A + + QN N + ++
Sbjct: 161 WADLWRPEFANDILVVDGARETLGM--ALQTLDLSQNELDTANLQQAIEKLEALRPNVKA 218
Query: 59 --THYLKVFGIG-DVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
T +K + D I +G+S D + + VVP G ++W D +AIP
Sbjct: 219 VLTDEIKTLMVNNDAPIGIGYSGDAAYVMSENPAITYVVPNDGGAIWTDNFAIPKTV--- 275
Query: 116 TKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP 173
G + G + I+ + E Q A + + T + ++LL P+ T A P
Sbjct: 276 -----GNLEGAYAFINFMLRPENAAQNAEYVGYATPSETAKQLL---PTELTSNKAFYPE 327
Query: 174 AEILARCEFLEPLSEATLSDYEWL 197
E + + E E L + + Y L
Sbjct: 328 PEAMQQMEHYEYLGKNAVEQYNDL 351
>gi|126207852|ref|YP_001053077.1| spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165975828|ref|YP_001651421.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|303249730|ref|ZP_07335934.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303252611|ref|ZP_07338774.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307245196|ref|ZP_07527287.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307247366|ref|ZP_07529414.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307249588|ref|ZP_07531575.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307251917|ref|ZP_07533818.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307254143|ref|ZP_07535988.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307256412|ref|ZP_07538194.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307258607|ref|ZP_07540342.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|407692058|ref|YP_006816847.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus
suis H91-0380]
gi|126096644|gb|ABN73472.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Actinobacillus pleuropneumoniae serovar 5b str. L20]
gi|165875929|gb|ABY68977.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|302648579|gb|EFL78772.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|302651297|gb|EFL81449.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306853840|gb|EFM86054.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306856210|gb|EFM88365.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306858443|gb|EFM90512.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306860609|gb|EFM92621.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306862843|gb|EFM94792.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306865042|gb|EFM96943.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306867264|gb|EFM99117.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|407388115|gb|AFU18608.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus
suis H91-0380]
Length = 360
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 26/200 (13%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQ 52
+ F W DLW PE A ++ +++ REV T A + L L
Sbjct: 158 DAFTSWGDLWKPEFANKVQLLDDAREVFNIALLKLGKNPNTTNPEEIKAAYEELRKLRPN 217
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V F + F G+V + W+ V A K + V +V PK G LW D AIPA +
Sbjct: 218 VLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKEQAPVNMVFPKEGPVLWVDTLAIPANA 277
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE---ELLKGKPSLDTKLIA 169
+ + H+ I + L A + P E LK P T+ A
Sbjct: 278 KNKEN------------AHKLINYLLSAPVAEKLTLEIGYPTSNVEALKTLPKEITEDPA 325
Query: 170 GVPPAEILARCEFLEPLSEA 189
P A++L ++ + + A
Sbjct: 326 IYPTADVLKAAQWQDDVGNA 345
>gi|430002217|emb|CCF17998.1| Putrescine-binding periplasmic protein [Rhizobium sp.]
Length = 365
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 21/142 (14%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V+ F+ + Y+ GD I++GWS DVL A R NV V+PK G +W D
Sbjct: 216 VKTFNSSAYIDELANGDTCISMGWSGDVLQAKARAEEAGNGVNVEYVIPKEGTYMWFDNL 275
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTK 166
AIPA ++ + H++I F ++ + V+ L + LD +
Sbjct: 276 AIPADAKNVEEA------------HEFINFLMKPEVIAKASNYVQYANGNLASQELLDKE 323
Query: 167 LIAG---VPPAEILARCEFLEP 185
++ PPAE +++ + P
Sbjct: 324 VLENPSVYPPAETVSKLFTISP 345
>gi|419802537|ref|ZP_14327723.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
parainfluenzae HK262]
gi|419845105|ref|ZP_14368392.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
parainfluenzae HK2019]
gi|385190097|gb|EIF37547.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
parainfluenzae HK262]
gi|386417031|gb|EIJ31523.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
parainfluenzae HK2019]
Length = 360
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREV-------IGTQAAAGRIAV----QQNLALLGNQVR 54
F W D W PE A +I +++ REV IG A+ + L L V
Sbjct: 160 FTSWGDFWKPEYANKIQLLDDAREVFNIALLKIGQDPNTKDPAIIKQAYEELLKLRPNVL 219
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 220 SFNSDNPANSFISGEVELGQLWNGSVRIAKKEQAPLNMVFPKEGPVLWVDTLAIPKTS-- 277
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG---V 171
K G H+ I + L A + P L+ K L ++
Sbjct: 278 --KNPDG--------AHKLINYLLGAKAAEKLTLAIGYPTANLEAKKVLPKEITEDPSIY 327
Query: 172 PPAEILARCEFLEPLSEA 189
PPAEIL + + + + +A
Sbjct: 328 PPAEILQKSYWQDDVGDA 345
>gi|403667759|ref|ZP_10933059.1| spermidine/putrescine-binding periplasmic protein [Kurthia sp.
JC8E]
Length = 358
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 32/209 (15%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-----------LALLGNQVR 54
F W LW P L G++ +V+S REV+G + +++ + L L V+
Sbjct: 156 FTSWDQLWDPSLKGKVLLVDSAREVLGMSLNSMNMSLNETDSTKLQKATDKLIDLSPNVQ 215
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
++ GD +A+ WS + ++ VP G++LW D IP S
Sbjct: 216 AVIGDEVTQLMVNGDAPVALTWSGQAADMMYDNEDLTYTVPDEGSNLWFDNMVIPKTS-- 273
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
K + G H++I F L Q A + ++T K +LL + + D +
Sbjct: 274 --KNVDGA--------HKFINFMLDPENAAQNADYVGYSTPNKAALKLLDPEVTSDERY- 322
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYEWL 197
P AE+ + L + + +Y L
Sbjct: 323 --YPSAEVRKNLHVYKNLGKEKIGEYNEL 349
>gi|383764711|ref|YP_005443693.1| spermidine/putrescine ABC transporter substrate binding protein
[Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381384979|dbj|BAM01796.1| spermidine/putrescine ABC transporter substrate binding protein
[Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 380
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQN----------LALLGNQVRL 55
+ + DLW P AGR+ M++ R +IG T A G N LA L ++L
Sbjct: 175 QSFADLWNPAYAGRLVMIDDSRAIIGATLLALGYDVNTTNPAELEEAKVKLAELARGIKL 234
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
FD GDV + + W+ + + A + + + + P GA LW D +AIP
Sbjct: 235 FDSDSPKTALIAGDVDLGIVWTGEAVIAKREVPSFEYIYPTEGAILWQDNYAIP 288
>gi|257868707|ref|ZP_05648360.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
gi|257802871|gb|EEV31693.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
Length = 356
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 28/204 (13%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDR---------- 58
W DLW PE A I +V+ RE +G A + + QN N + ++
Sbjct: 158 WADLWRPEFANDILVVDGARETLGM--ALQTLDLSQNELDTANLQQAIEKLEALRPNVKA 215
Query: 59 --THYLKVFGIG-DVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
T +K + D I +G+S D + + VVP G ++W D +AIP
Sbjct: 216 VLTDEIKTLMVNNDAPIGIGYSGDAAYVMSENPAITYVVPNDGGAIWTDNFAIPKTV--- 272
Query: 116 TKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP 173
G + G + I+ + E Q A + + T + ++LL P+ T A P
Sbjct: 273 -----GNLEGAYAFINFMLRPENAAQNAEYVGYATPSETAKQLL---PTELTSNKAFYPE 324
Query: 174 AEILARCEFLEPLSEATLSDYEWL 197
E + + E E L + + Y L
Sbjct: 325 PEAMQQMEHYEYLGKNAVEQYNDL 348
>gi|167855017|ref|ZP_02477791.1| hypothetical protein HPS_10240 [Haemophilus parasuis 29755]
gi|167853865|gb|EDS25105.1| hypothetical protein HPS_10240 [Haemophilus parasuis 29755]
Length = 346
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 26/200 (13%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQ 52
+ F W DLW PE G++ +++ REV T+ A A + L L
Sbjct: 144 DNFTAWGDLWKPEFKGKVQLLDDAREVFNIALLKLGQDPNTKDPAVIKAAYEELLKLRPN 203
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V F + F G+V + W+ V A K + V +V PK G LW D AIP+
Sbjct: 204 VLAFSSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPVNMVFPKEGPVLWVDTLAIPS-- 261
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---A 169
+ P H+ I + L A + P +K L ++ A
Sbjct: 262 ---------NAKNP-DAAHKLINYLLSAPVAEKLTLEIGYPTSNVKALEKLPKEITEDPA 311
Query: 170 GVPPAEILARCEFLEPLSEA 189
P +E+L + ++ + + +A
Sbjct: 312 IYPTSEVLQKSQWQDDVGDA 331
>gi|170747368|ref|YP_001753628.1| extracellular solute-binding protein [Methylobacterium
radiotolerans JCM 2831]
gi|170653890|gb|ACB22945.1| extracellular solute-binding protein family 1 [Methylobacterium
radiotolerans JCM 2831]
Length = 375
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 17/106 (16%)
Query: 21 ISMVNSPREVI-------GTQAAAGR----IAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
I M++SP ++I G +A + R V L + VR F + Y++ GD
Sbjct: 183 IMMLDSPEDLIPSMLPAFGAKADSKRWDDMTLVTDALYKVRGAVRKFHSSEYIQALANGD 242
Query: 70 VWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 109
+ +AVG+S D++ A +R ++A VVPK GA +W D +AIP
Sbjct: 243 ICLAVGYSGDIMQAKRRAEEAKNGIDIAYVVPKEGALMWFDTFAIP 288
>gi|108805698|ref|YP_645635.1| extracellular solute-binding protein [Rubrobacter xylanophilus DSM
9941]
gi|108766941|gb|ABG05823.1| extracellular solute-binding protein, family 1 [Rubrobacter
xylanophilus DSM 9941]
Length = 363
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 81/201 (40%), Gaps = 35/201 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN------LALLGNQVR-------- 54
W +W PE G+I+M+N RE IG AA R+ N LA ++
Sbjct: 166 WDAMWNPEFKGKIAMLNDVRETIG--AALMRLGYSINSTDPDELAEAEESLKEQKPLLRG 223
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F T GD+ + +S D A+ ++ +PK GA+ W D AIP +
Sbjct: 224 YFASTEVRPAVQNGDLLLGHVYSGDAFLAMVENEELSYAIPKPGATRWTDNMAIPVGAPH 283
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQ--TARALPFNTRVKLPEELLKGKPSLDTKL--IAG 170
L H++I + L+ L T P E P +D +L + G
Sbjct: 284 ------------VDLAHEFINYILEPKVGAELSNYTYYNTPNE--AALPMIDEELRRLPG 329
Query: 171 VPPA-EILARCEFLEPLSEAT 190
P+ E+ R + +E + EAT
Sbjct: 330 YTPSQEVFGRLQVIEDVGEAT 350
>gi|365968214|ref|YP_004949776.1| PotD protein [Aggregatibacter actinomycetemcomitans ANH9381]
gi|415769855|ref|ZP_11484511.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans D17P-2]
gi|416074991|ref|ZP_11584820.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|444337409|ref|ZP_21151391.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
gi|444345808|ref|ZP_21153813.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
gi|348006418|gb|EGY46835.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|348657216|gb|EGY74812.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans D17P-2]
gi|365747127|gb|AEW78032.1| PotD protein [Aggregatibacter actinomycetemcomitans ANH9381]
gi|443542429|gb|ELT52760.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
gi|443546951|gb|ELT56535.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
Length = 393
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 193 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 252
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 253 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTS-- 310
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 311 --KNPDGA--------HKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDSAIY 360
Query: 172 PPAEILARCEFLEPLSEA 189
P A++L + + + + +A
Sbjct: 361 PSADVLQKSYWQDDVGDA 378
>gi|315641327|ref|ZP_07896403.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus italicus DSM
15952]
gi|315482900|gb|EFU73420.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus italicus DSM
15952]
Length = 357
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIG------------------TQAAAGRIAV 42
+N W DLW PEL I +++ RE+IG QA A +
Sbjct: 150 VNAEDMTSWNDLWRPELKDNIMLIDGAREIIGLGLNSLGYSVNSKNMDQLNQAVAKLRTL 209
Query: 43 QQNL-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASL 101
N+ A++ ++++++ + +AV +S + + S++ V+PK G +L
Sbjct: 210 TPNVKAIVADEIKMYMENE--------ESAVAVTFSGEAADMMYENSHLHYVIPKEGTNL 261
Query: 102 WADLWAIPAASRLETKQIGGRVRGPFPLIHQWIE--FCLQTARALPFNTRVKLPEELLKG 159
W+D IP S+ + G + I+ +E Q A + ++T + +L+
Sbjct: 262 WSDNIVIPKTSKNQ--------EGAYAFINFMLEPKNAAQNAEYIGYSTPNEAAMKLMPK 313
Query: 160 KPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
+ D + P E++A+ E L L Y L L+
Sbjct: 314 EVVEDKQF---YPTKEMMAKMEVYRDLGSKYLGIYNDLFLELK 353
>gi|393765753|ref|ZP_10354314.1| extracellular solute-binding protein [Methylobacterium sp. GXF4]
gi|392728989|gb|EIZ86293.1| extracellular solute-binding protein [Methylobacterium sp. GXF4]
Length = 394
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 17/106 (16%)
Query: 21 ISMVNSPREVI-------GTQAAAGR----IAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
I M++SP ++I G +A + R V L + VR F + Y++ GD
Sbjct: 202 IMMLDSPEDLIPSMLPVFGAKADSKRWDDLTLVTDALYKVRGSVRKFHASEYIQALANGD 261
Query: 70 VWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 109
+ +AVG+S DV+ A +R +A VVPK GA +W D +AIP
Sbjct: 262 ICVAVGYSGDVMQAKRRAEEAKNGIEIAYVVPKEGALMWFDTFAIP 307
>gi|416052375|ref|ZP_11578250.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347992104|gb|EGY33529.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 393
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 193 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 252
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 253 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTS-- 310
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 311 --KNPDGA--------HKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDPAIY 360
Query: 172 PPAEILARCEFLEPLSEA 189
P A++L + + + + +A
Sbjct: 361 PSADVLQKSYWQDDVGDA 378
>gi|240948616|ref|ZP_04752989.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus
minor NM305]
gi|240297124|gb|EER47695.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus
minor NM305]
Length = 366
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 79/202 (39%), Gaps = 26/202 (12%)
Query: 2 NENGFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLG 50
N F W DLW PE A ++ +++ REV T+ A + L L
Sbjct: 162 NGTEFTSWGDLWKPEFANKVQLLDDAREVFNIALLKLGKNPNTRDPEEIKAAYEELKKLR 221
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
V F + F G+V + W+ V A K + + +V PK G LW D AIPA
Sbjct: 222 PNVLSFTSDNPANSFISGEVSVGQLWNGSVRIAKKEQAPINMVFPKEGPVLWVDTLAIPA 281
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE---ELLKGKPSLDTKL 167
++ + H+ I + L + + P E LK P T+
Sbjct: 282 NAKNKEN------------AHKLINYLLGAKASEKLTLAIGYPTSNVEALKVLPKEITED 329
Query: 168 IAGVPPAEILARCEFLEPLSEA 189
A P AE+L ++ + + +A
Sbjct: 330 PAIYPTAEVLKSSQWQDEVGDA 351
>gi|339006887|ref|ZP_08639462.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
laterosporus LMG 15441]
gi|421873293|ref|ZP_16304907.1| bacterial extracellular solute-binding family protein
[Brevibacillus laterosporus GI-9]
gi|338776096|gb|EGP35624.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
laterosporus LMG 15441]
gi|372457619|emb|CCF14456.1| bacterial extracellular solute-binding family protein
[Brevibacillus laterosporus GI-9]
Length = 349
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIA-----------VQQNLALLGNQVRLFD 57
W DLW P+ GR+ ++N RE +G + +L L + FD
Sbjct: 152 WSDLWNPKYKGRVVVLNDSREALGMSLKKNGFSNSTISEKELDIANADLKKLLPNLLAFD 211
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ F + WI WS D +++ VVPK G +++AD +AIP ++
Sbjct: 212 TDTIKQKFIAEEAWIGTVWSGDAAFIYPENNDIGYVVPKEGGTIFADTFAIPKGAK 267
>gi|418465922|ref|ZP_13036854.1| PotD protein [Aggregatibacter actinomycetemcomitans RhAA1]
gi|359755420|gb|EHK89584.1| PotD protein [Aggregatibacter actinomycetemcomitans RhAA1]
Length = 365
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 165 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 224
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 225 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTS-- 282
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 283 --KNPDG--------AHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDPAIY 332
Query: 172 PPAEILARCEFLEPLSEA 189
P A++L + + + + +A
Sbjct: 333 PSADVLQKSYWQDDVGDA 350
>gi|444348372|ref|ZP_21156051.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|443547201|gb|ELT56742.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 365
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 165 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 224
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 225 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTS-- 282
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 283 --KNPDG--------AHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDSAIY 332
Query: 172 PPAEILARCEFLEPLSEA 189
P A++L + + + + +A
Sbjct: 333 PSADVLQKSYWQDDVGDA 350
>gi|261868427|ref|YP_003256349.1| PotD protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|416103285|ref|ZP_11589278.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|261413759|gb|ACX83130.1| PotD [Aggregatibacter actinomycetemcomitans D11S-1]
gi|348008020|gb|EGY48299.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
Length = 365
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 165 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 224
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 225 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTS-- 282
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 283 --KNPDG--------AHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDSAIY 332
Query: 172 PPAEILARCEFLEPLSEA 189
P A++L + + + + +A
Sbjct: 333 PSADVLQKSYWQDDVGDA 350
>gi|260914210|ref|ZP_05920683.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Pasteurella dagmatis ATCC
43325]
gi|260631843|gb|EEX50021.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Pasteurella dagmatis ATCC
43325]
Length = 351
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 78/199 (39%), Gaps = 26/199 (13%)
Query: 5 GFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQV 53
F W DLW PE G++ +++ REV T+ + L L V
Sbjct: 150 NFTTWGDLWKPEFQGKVQLLDDAREVFNIALLKLGQDPNTKDPEIIKQAYEELLKLRPNV 209
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 210 LSFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPTTS- 268
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE---ELLKGKPSLDTKLIAG 170
K G H+ I + L + + P E LK P+ T+ A
Sbjct: 269 ---KNPDGA--------HKLINYLLSAKVSAKLTEEIGYPTSNVEALKLLPAEITQDPAI 317
Query: 171 VPPAEILARCEFLEPLSEA 189
P AEIL + + + + +A
Sbjct: 318 YPTAEILQKSHWQDDVGDA 336
>gi|416085458|ref|ZP_11587186.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
gi|348010203|gb|EGY50274.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
Length = 393
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 193 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 252
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 253 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTS-- 310
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 311 --KNPDGA--------HKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDSAIY 360
Query: 172 PPAEILARCEFLEPLSEA 189
P A++L + + + + +A
Sbjct: 361 PSADVLQKSYWQDDVGDA 378
>gi|3341857|gb|AAC27498.1| PotD [Aggregatibacter actinomycetemcomitans Y4]
Length = 365
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 165 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 224
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 225 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTS-- 282
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
K G H+ I + L A + P L+ K +L ++ A
Sbjct: 283 --KNPDG--------AHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKEITEDSAIY 332
Query: 172 PPAEILARCEFLEPLSEA 189
P A++L + + + + +A
Sbjct: 333 PSADVLQKSYWQDEVGDA 350
>gi|398854217|ref|ZP_10610791.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398236715|gb|EJN22488.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 362
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 35/148 (23%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK GA+LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLL 272
Query: 107 AIPAASR-----------LETKQIGGRVR------GPFPLIHQWIEFCLQTARALPFNTR 149
AIPA + L Q+ +V P P Q+++ +AL N
Sbjct: 273 AIPADASNTKEAHAFINYLLDPQVIAKVSASVGYANPNPAAKQYMD------QALVNNPE 326
Query: 150 VKLPEELLKGKPSLDTKLIAGVPPAEIL 177
V P+E+ LD I+ PP I+
Sbjct: 327 VYPPQEV------LDKLYISTTPPQAIM 348
>gi|240851507|ref|ZP_04752258.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Actinobacillus minor 202]
gi|240310025|gb|EER48317.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Actinobacillus minor 202]
Length = 366
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 78/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV T+ A + L L V
Sbjct: 166 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKLGKNPNTRDPEEIKAAYEELKKLRPNVL 225
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F + F G+V + W+ V A K + + +V PK G LW D AIPA ++
Sbjct: 226 SFTSDNPANSFISGEVSVGQLWNGSVRIAKKEQAPINMVFPKEGPVLWVDTLAIPANAKN 285
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE---ELLKGKPSLDTKLIAGV 171
+ H+ I + L + + P E LK P T+ A
Sbjct: 286 KEN------------AHKLINYLLGAKASEKLTLAIGYPTSNVEALKVLPKEITEDPAIY 333
Query: 172 PPAEILARCEFLEPLSEA 189
P AE+L ++ + + +A
Sbjct: 334 PTAEVLKSSQWQDEVGDA 351
>gi|403068806|ref|ZP_10910138.1| spermidine:putrescine ABC transporter [Oceanobacillus sp. Ndiop]
Length = 358
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 85/214 (39%), Gaps = 48/214 (22%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG--------TQAAAGRIAVQQNL-----------ALL 49
+ DLW PEL +I +++ RE++G + +Q+ L A++
Sbjct: 159 FNDLWDPELENKILLIDGAREILGMGLNSLGYSLNDTDEDHLQEALTKLKELTPNVKAIV 218
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G++ ++ + + IAVGWS D + N+ VVP+ G++LW D + IP
Sbjct: 219 GDENKMLMENN--------EAAIAVGWSGDARDIMWENENIDYVVPEEGSNLWFDNFVIP 270
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSL 163
++ HQ+I F L Q + ++T K E LK P
Sbjct: 271 KTAQ------------NVDAAHQFINFMLDPEVAAQNTEYVSYSTPNK---EALKYMPED 315
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
P E+ R E E L + L+ Y L
Sbjct: 316 MVNDERFYPEPELTERLEVYENLGKQHLAYYNEL 349
>gi|302037133|ref|YP_003797455.1| polyamine ABC transporter periplasmic-binding protein PotD
[Candidatus Nitrospira defluvii]
gi|300605197|emb|CBK41530.1| Polyamine ABC transporter, periplasmic-binding protein PotD
[Candidatus Nitrospira defluvii]
Length = 349
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 23/113 (20%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQNLALLGN 51
W LW GRISM+N REV G +AA R+ Q+ L
Sbjct: 153 WAILWDERYKGRISMLNDQREVFGAVLRSMGQSMNSTDPQVIEAAKERLLRQKPL----- 207
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 104
V+ + HY ++ G+V +A W V A+ ++ VVPK GA+LWAD
Sbjct: 208 -VKTYTSDHYDQLLASGEVVLAHAWGGPVARAMVERPSIRYVVPKEGATLWAD 259
>gi|113461191|ref|YP_719260.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
gi|112823234|gb|ABI25323.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
Length = 345
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 81/207 (39%), Gaps = 36/207 (17%)
Query: 2 NENGFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLG 50
N + W DLW PE A ++ M++ PRE+ TQ Q L L
Sbjct: 141 NPEHLQSWGDLWNPEFANKLQMLDDPRELFNIALLKMGENPNTQDPKVIEKAYQELLKLR 200
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
+ +F+ + F G+ + + W+ + A + +V PK G LW D AIPA
Sbjct: 201 PNILVFNSDNPANTFITGETDVGLIWNGSIRVAQNAGVPIKIVYPKEGTMLWIDNLAIPA 260
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALP-------FNTRVKLPEELLKGKPSL 163
++ V + LI+ + + L N +LP+EL + K
Sbjct: 261 TAK--------NVESAYKLINYLLSADVSETLTLEIGYPTSNLNALERLPKELTENK--- 309
Query: 164 DTKLIAGV-PPAEILARCEFLEPLSEA 189
G+ P E+L R ++ + EA
Sbjct: 310 ------GIFLPQEVLDRSQWQVDVGEA 330
>gi|456012794|gb|EMF46482.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Planococcus halocryophilus Or1]
Length = 358
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 34/210 (16%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQV 53
F+ W DLW P L + +V+S RE+IG T R A + L +G V
Sbjct: 155 FESWDDLWNPSLEQEVILVDSAREIIGLGLNSLGYSLNSTNVDELREATDK-LKTMGPNV 213
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ +++ + +AV WS + ++ VPK G++LW D IP
Sbjct: 214 KAIIGDEIVELMRREEAAVAVTWSGQAADMMWINEDIDYSVPKEGSNLWFDNMIIP---- 269
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKL 167
+ G + G H +I F L Q A + ++T + L+ + + D +
Sbjct: 270 ----KTAGNIEGA----HAFINFMLDPEVAAQNADYVGYSTPNEKAVTLMDPEVTEDERF 321
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWL 197
PP E+ R E E L L Y L
Sbjct: 322 ---YPPVELRERLEVYENLGLEMLGTYNEL 348
>gi|291519205|emb|CBK74426.1| Spermidine/putrescine-binding periplasmic protein [Butyrivibrio
fibrisolvens 16/4]
Length = 355
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 80/206 (38%), Gaps = 39/206 (18%)
Query: 9 WKDLWLPELAGRISMVNSPRE--VIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFG 66
W LW P RI M+NS R+ ++ + I L L D Y+ +
Sbjct: 158 WDCLWNPNFKNRIVMINSQRDAFMVAQKKLGYDINTSSKKELDDTFNLLCDEKKYVYAYL 217
Query: 67 IGDVW---------IAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ + +AV +S + ++ ++ +VP G +LW D W +P
Sbjct: 218 QDETYECMISEDAAMAVCYSGEAAMGMEYNEDLDYIVPDEGGNLWIDSWFVP-------- 269
Query: 118 QIGGRVRGPFPLIHQWIEF-CLQTARALPF--------NTRVKLPEELLKGKPSLDTKLI 168
R + +WI+F C + A F NT+V E+ + +L + +
Sbjct: 270 ----RTCKHYDAAMKWIDFMCEEQAATDNFEYVWYATPNTKVAQHED----EDTLADETV 321
Query: 169 AGVPPAEILARCEFLEPLSEATLSDY 194
P E LARC+ E + TL DY
Sbjct: 322 --FPTKETLARCKLYEAYDKETL-DY 344
>gi|328545139|ref|YP_004305248.1| ABC transporter polyamine transport protein, periplasmic protein
[Polymorphum gilvum SL003B-26A1]
gi|326414881|gb|ADZ71944.1| ABC transporter, polyamine transport protein, periplasmic protein
[Polymorphum gilvum SL003B-26A1]
Length = 362
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM----SNVAV--VVPKSGASLWADL 105
+R F + Y+ GD+ +AVGWS D+L A R +NV V V+PK GA +W D
Sbjct: 212 HIRKFHSSEYINALANGDICLAVGWSGDILQARDRAAEAGNNVTVEYVIPKEGALMWFDN 271
Query: 106 WAIPAASR 113
AIPA +R
Sbjct: 272 MAIPADAR 279
>gi|325578149|ref|ZP_08148284.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus parainfluenzae
ATCC 33392]
gi|325159885|gb|EGC72014.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus parainfluenzae
ATCC 33392]
Length = 376
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 78/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREV-------IGTQAAAGRIAV----QQNLALLGNQVR 54
F W D W PE A ++ +++ REV IG A+ + L L V
Sbjct: 176 FTSWGDFWKPEYANKVQLLDDAREVFNIALLKIGQDPNTKDPAIIKQAYEELLKLRPNVL 235
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 236 SFNSDNPANSFISGEVELGQLWNGSVRIAKKEQAPLNMVFPKEGPVLWVDTLAIPKTS-- 293
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG---V 171
K G H+ I + L A + P L+ K L ++
Sbjct: 294 --KNPDG--------AHKLINYLLGAKAAEKLTLAIGYPTANLEAKKVLPKEITEDPSIY 343
Query: 172 PPAEILARCEFLEPLSEA 189
PPAEIL + + + + +A
Sbjct: 344 PPAEILQKSYWQDDVGDA 361
>gi|427708603|ref|YP_007050980.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
gi|427361108|gb|AFY43830.1| extracellular solute-binding protein family 1 [Nostoc sp. PCC 7107]
Length = 360
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 28/198 (14%)
Query: 7 KDWKDLWLPE--LAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQV 53
+DW LW + L R++++N REV+G ++ L L +
Sbjct: 160 EDWDYLWQNQSILNKRMTLLNDVREVMGAVLRMLGYSYNSKEEEELKQAYNKLQQLKPAI 219
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
FD + GD+ +A+ +S+D + +K V+P+SG+SLW D +P ++
Sbjct: 220 ASFDTDAWQNQILSGDLVLAMCYSADAIRVIKENPKFKYVIPRSGSSLWTDTIVVPKSA- 278
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG--- 170
I G + WI F LQ A + + + G L KL
Sbjct: 279 ---PNIDG--------AYAWINFILQPEVAAIISQNLNISTPNGAGFEQLPKKLQDNKNL 327
Query: 171 VPPAEILARCEFLEPLSE 188
P A +L +CE + PL +
Sbjct: 328 FPEAALLEKCERITPLGD 345
>gi|407478190|ref|YP_006792067.1| extracellular solute-binding protein family 1 [Exiguobacterium
antarcticum B7]
gi|407062269|gb|AFS71459.1| Extracellular solute-binding protein family 1 [Exiguobacterium
antarcticum B7]
Length = 357
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 48/214 (22%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQ------------------AAAGRIAVQQNL-ALL 49
WKDLW P L +I + + REV+G A A + + N+ A++
Sbjct: 158 WKDLWDPALKNQILLADGAREVMGMSLNSLGYSLNETDETKLQAAKANLMKLTPNVKAIV 217
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G++++L + + I V WS D + N+ V+PK G+++W D IP
Sbjct: 218 GDEIKL--------LLANEEAGIGVVWSGDANEIMSENENLNYVIPKEGSNVWFDNIVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVKLPEELLKGKPSL 163
+ K I G HQ+I F L+ A + ++T +LL +
Sbjct: 270 KTA----KNIDGA--------HQFINFMLEPKNAAKNADYVGYSTPNTAALKLLDREVRE 317
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
D + P E+ E E L + L+ Y L
Sbjct: 318 DERF---YPDKEVTDTLEVYENLGKEMLAHYNEL 348
>gi|365540689|ref|ZP_09365864.1| spermidine/putrescine transport system substrate-binding protein
[Vibrio ordalii ATCC 33509]
Length = 312
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 84/212 (39%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 114 NDFQSWGDLWNPELKGQLMLMDDTREVFHIALRKLGYSGNTTDEKQIDEAYAELQKLMPN 173
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 174 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 233
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK E K P+L
Sbjct: 234 K------------NVEAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNEKFKDSPAL--- 278
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P + L R E+ + E T+ ++ +
Sbjct: 279 ----FPSQDDLDRVEWQSAVGEKTVQYEDYFM 306
>gi|94502154|ref|ZP_01308654.1| extracellular solute-binding protein, family 1 [Oceanobacter sp.
RED65]
gi|94425725|gb|EAT10733.1| extracellular solute-binding protein, family 1 [Oceanobacter sp.
RED65]
Length = 350
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 59 THYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQ 118
T Y G G + + VG+S D+L ++ ++ +P+ GAS+W D+ AIP+ S E K+
Sbjct: 215 TQYTDDLGAGKICVGVGYSGDILAEMESNPAISYNIPREGASMWFDMMAIPSNS--ENKE 272
Query: 119 IGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG---VPPAE 175
+ R+ I F A + + P + K +D +++ P E
Sbjct: 273 LAYRL----------INFLSTPKIAGTNSNYIAYPTPVDTAKAFVDAEILEDKTIYPSQE 322
Query: 176 ILARCEFLEPL 186
ILAR + PL
Sbjct: 323 ILARLQAFAPL 333
>gi|392957073|ref|ZP_10322598.1| family 1 extracellular solute-binding protein [Bacillus macauensis
ZFHKF-1]
gi|391876975|gb|EIT85570.1| family 1 extracellular solute-binding protein [Bacillus macauensis
ZFHKF-1]
Length = 357
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 48/214 (22%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG----TQAAAGRIAVQQNL---------------ALL 49
W+DLW +L +I +V+ RE++G T + Q+L A++
Sbjct: 158 WQDLWDKDLRNKIFLVDGVREIMGIGLTTTGYSLNDTNHQHLQKAKRKLDTLIPNVRAIV 217
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G++ +L + GD I +GWS + + ++ V+PK G++LW D IP
Sbjct: 218 GDETKL--------LLANGDASIGIGWSGNAAEIIDENPDLDYVIPKEGSNLWFDNMVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSL 163
++ + + Q++ F L Q + +++ K + L + S
Sbjct: 270 KTAKNKKAAL------------QFMNFMLDPKVAAQNTEYVHYSSPNKAALKYLPKEIST 317
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
D + PP +I + E LS+ +S + L
Sbjct: 318 DKRF---YPPKKITDQLEVYRNLSQKDISYFNEL 348
>gi|433448387|ref|ZP_20411319.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella ceti NC36]
gi|429539858|gb|ELA07892.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella ceti NC36]
Length = 364
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 27/129 (20%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQ-----------------AAAGRIA-VQQN 45
N K W DLW PE +I +V+S R+++G AA G++A + N
Sbjct: 160 NKIKTWNDLWRPEFKKKIMLVDSARDILGMTLVSNGASVNTKNLPELAAADGKLATLMPN 219
Query: 46 L-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 104
+ A++ ++++++ + IAV +S + + R ++ VVPK G +LW D
Sbjct: 220 VKAIVADEIKMY--------MAQNEAAIAVDYSGNAAEMMSRNEHLQYVVPKEGGNLWLD 271
Query: 105 LWAIPAASR 113
+ IP R
Sbjct: 272 NFVIPKTVR 280
>gi|428302168|ref|YP_007140474.1| extracellular solute-binding protein [Calothrix sp. PCC 6303]
gi|428238712|gb|AFZ04502.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
6303]
Length = 365
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 37/209 (17%)
Query: 7 KDWKDLWLPE--LAGRISMVNSPREVIG--------TQAAAGRIAVQ---QNLALLGNQV 53
+DW+ +W L R++++N REV+G + A ++ + L + + +
Sbjct: 165 EDWEYIWQNRDILNKRMTLMNDSREVMGAALKMLGYSYNATDETQIKAAYEKLKEIKDSI 224
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
FD + GD+ +A+ +SSD + K + V+PKSG SLW D I +
Sbjct: 225 SSFDTDAWRSKIVTGDLDLAMSYSSDAIKLTKENPKLKYVIPKSGTSLWTDTLVIMKTA- 283
Query: 114 LETKQIGGRVRGPFPL-IHQWIEFCLQ--TARALPFNTRVKLPE----ELLKGKPSLDTK 166
P P + WI + LQ + L N + P E L +T
Sbjct: 284 ------------PNPDGAYAWINYLLQPEVSAKLTQNQSLATPNRAAFEQLPAAIQNNTN 331
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYE 195
L P +L +C+ + PL + TL YE
Sbjct: 332 LF---PSQSLLEKCDRMSPLGD-TLEIYE 356
>gi|387774151|ref|ZP_10129423.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
parahaemolyticus HK385]
gi|386902295|gb|EIJ67136.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
parahaemolyticus HK385]
Length = 359
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A +I +++ REV T A + L L V
Sbjct: 159 FTSWGDLWKPEFANKIQLLDDAREVFNIALLKLGKNPNTTDPEEIKAAYEELKKLRPNVL 218
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F + F G+V + W+ V A K + + +V PK G LW D AIPA S+
Sbjct: 219 SFSSDNPANSFISGEVSVGQLWNGSVRIAKKEQAPIDMVFPKEGPVLWVDTLAIPANSK 277
>gi|262274396|ref|ZP_06052207.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Grimontia hollisae CIP 101886]
gi|262220959|gb|EEY72273.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Grimontia hollisae CIP 101886]
Length = 347
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 73/195 (37%), Gaps = 26/195 (13%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQVRLFD 57
W DLW PE AG I +++ R+V G A ++ + L L V +++
Sbjct: 152 WADLWKPEFAGHIILLDDVRDVFGMALKAKGYSINTTNEAEIKEAYEMLKTLRPNVVVYN 211
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
F G+V I W+ + A M N+ V P+ G+ LW D + IP +
Sbjct: 212 SDAPHVPFVTGEVGIGQQWNGNAYLAQAEMDNIQFVYPEEGSILWMDNFIIPKGAE---- 267
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG---VPPA 174
L H++I+F + + P + K L + P
Sbjct: 268 --------KVDLAHKFIDFMYRPENQAAMVEELGYPAPSKRAKEKLSAEYTENNVIFPSD 319
Query: 175 EILARCEFLEPLSEA 189
E + + EF + +A
Sbjct: 320 EDVEKGEFTNDVGDA 334
>gi|146280465|ref|YP_001170618.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|386018710|ref|YP_005936734.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
gi|145568670|gb|ABP77776.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|327478682|gb|AEA81992.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
Length = 361
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 39/197 (19%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
W L+ PE A + I+ ++S E+I ++ AA ++ L +
Sbjct: 152 WSVLFEPENAQKLASCGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKAEEKLLAVRPH 211
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
VR F + Y+ G++ +A G+S DV A R +A +PK G +LW D+
Sbjct: 212 VRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDML 271
Query: 107 AIPA-ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
AIPA AS +E H +I + L+ + V LK +D
Sbjct: 272 AIPADASNVEEA-------------HAFINYLLRPEVIAAVSDYVGYANPNLKASELMDQ 318
Query: 166 KL---IAGVPPAEILAR 179
++ + PP E+L R
Sbjct: 319 EVREDASVYPPQEVLDR 335
>gi|339492154|ref|YP_004712447.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338799526|gb|AEJ03358.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 361
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 39/197 (19%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
W L+ PE A + I+ ++S E+I ++ AA ++ L +
Sbjct: 152 WSVLFEPENAQKLASCGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKAEEKLLAVRPH 211
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
VR F + Y+ G++ +A G+S DV A R +A +PK G +LW D+
Sbjct: 212 VRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDML 271
Query: 107 AIPA-ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
AIPA AS +E H +I + L+ + V LK +D
Sbjct: 272 AIPADASNVEEA-------------HAFINYLLRPEVIAAVSDYVGYANPNLKASELMDQ 318
Query: 166 KL---IAGVPPAEILAR 179
++ + PP E+L R
Sbjct: 319 EVREDASVYPPQEVLDR 335
>gi|365837890|ref|ZP_09379247.1| putrescine-binding periplasmic protein [Hafnia alvei ATCC 51873]
gi|364561081|gb|EHM38995.1| putrescine-binding periplasmic protein [Hafnia alvei ATCC 51873]
Length = 368
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +AVGWS DV+ A R N+A +PK GA ++ D+
Sbjct: 218 NIRYFHSSQYINDLANGDICVAVGWSGDVMQAANRAKEAKNGVNIAYSIPKEGALVFFDV 277
Query: 106 WAIPAASRLETK 117
+A+PA ++ T+
Sbjct: 278 FAMPADAKNTTE 289
>gi|386390018|ref|ZP_10074815.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
paraphrohaemolyticus HK411]
gi|385694060|gb|EIG24686.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
paraphrohaemolyticus HK411]
Length = 359
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A +I +++ REV T A + L L V
Sbjct: 159 FTSWGDLWKPEFANKIQLLDDAREVFNIALLKLGKNPNTTDPEEIKAAYEELKKLRPNVL 218
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F + F G+V + W+ V A K + + +V PK G LW D AIPA S+
Sbjct: 219 SFSSDNPANSFISGEVSVGQLWNGSVRIAKKEQAPIDMVFPKEGPVLWVDTLAIPANSK 277
>gi|78358712|ref|YP_390161.1| ABC transporter substrate-binding protein [Desulfovibrio alaskensis
G20]
gi|78221117|gb|ABB40466.1| extracellular solute-binding protein family 1 [Desulfovibrio
alaskensis G20]
Length = 348
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQVRLFD 57
W DL PE G+I + + R+ +G A +V + L L VR+FD
Sbjct: 151 WHDLLRPEFKGKIILSDDLRDTMGMALLATGHSVNSRSDAELKEAYEFLKQLYPSVRVFD 210
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
T + F +V I + W+ D + M N+ + P+ GA LW D IP
Sbjct: 211 VTATKQAFASEEVIIGMSWNGDATVLTQEMPNLQYIYPREGAPLWLDSLCIP 262
>gi|317491403|ref|ZP_07949839.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920950|gb|EFV42273.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 368
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +AVGWS DV+ A R N+A +PK GA ++ D+
Sbjct: 218 NIRYFHSSQYINDLANGDICVAVGWSGDVMQAANRAKEAKNGVNIAYSIPKEGALVFFDV 277
Query: 106 WAIPAASRLETK 117
+A+PA ++ T+
Sbjct: 278 FAMPADAKNTTE 289
>gi|170717788|ref|YP_001784852.1| extracellular solute-binding protein [Haemophilus somnus 2336]
gi|168825917|gb|ACA31288.1| extracellular solute-binding protein family 1 [Haemophilus somnus
2336]
Length = 348
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 81/207 (39%), Gaps = 36/207 (17%)
Query: 2 NENGFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLG 50
N + W DLW PE A ++ M++ PRE+ TQ Q L L
Sbjct: 144 NPEQLQSWGDLWNPEFANKLQMLDDPRELFNIALLKMGENPNTQDPKVIEKAYQELLKLR 203
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
+ +F+ + F G+ + + W+ + A + +V PK G LW D AIPA
Sbjct: 204 PNILVFNSDNPANTFITGETDVGLIWNGSIRVAQNAGVPIKIVYPKEGTMLWIDNLAIPA 263
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALP-------FNTRVKLPEELLKGKPSL 163
++ V + LI+ + + L N +LP+EL + K
Sbjct: 264 TAK--------NVESAYKLINYLLSADVSEKLTLEIGYPTSNLNALERLPKELTENK--- 312
Query: 164 DTKLIAGV-PPAEILARCEFLEPLSEA 189
G+ P E+L R ++ + EA
Sbjct: 313 ------GIFLPQEVLDRSQWQVDVGEA 333
>gi|452750133|ref|ZP_21949885.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
gi|452005783|gb|EMD98063.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
Length = 361
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 39/197 (19%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
W ++ PE A + I+ ++S E+I ++ AA ++ L +
Sbjct: 152 WAVIFEPENAEKLASCGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKAEEKLLAVRPH 211
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
VR F + Y+ G++ +A G+S DV A R +A +PK GA+LW D+
Sbjct: 212 VRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGVEIAYAIPKEGANLWFDML 271
Query: 107 AIPA-ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
AIPA AS +E H +I + L+ + V LK +D
Sbjct: 272 AIPADASNVEEA-------------HAFINYLLRPEVIAAVSDYVGYANPNLKAGELMDQ 318
Query: 166 KLIAGV---PPAEILAR 179
++ PP E+L R
Sbjct: 319 EVRGDASVYPPQEVLDR 335
>gi|409399066|ref|ZP_11249438.1| ABC transporter substrate-binding protein [Acidocella sp. MX-AZ02]
gi|409131710|gb|EKN01399.1| ABC transporter substrate-binding protein [Acidocella sp. MX-AZ02]
Length = 408
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREV-------IGTQAAAGRIAV-QQNLALLGNQ 52
M + ++DLW P AG + M + +E+ +G A ++ A L Q
Sbjct: 194 MTKREITSYEDLWDPAFAGHVGMFSDVQELGCAGLLKLGINPTTSTPAEWEKAAATLKEQ 253
Query: 53 -----VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLW 106
VR + Y+ GD+WI + WS D+ A K ++ VVPK GA +W D
Sbjct: 254 KAKGLVRQYYDQSYINALENGDIWITMAWSGDIYQANSKGYKDLKFVVPKQGAVIWHDNM 313
Query: 107 AIPAASR 113
IP ++
Sbjct: 314 CIPVGAK 320
>gi|421858504|ref|ZP_16290771.1| spermidine/putrescine-binding periplasmic protein [Paenibacillus
popilliae ATCC 14706]
gi|410831949|dbj|GAC41208.1| spermidine/putrescine-binding periplasmic protein [Paenibacillus
popilliae ATCC 14706]
Length = 347
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW E G++ +++ RE+IG T A A +L L V FD
Sbjct: 150 WADLWNDEYKGKVLLLDDNREIIGVALKKAGKSNSTDNEADINAAADDLRKLVPNVVAFD 209
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + + WI WS D +VA VVP+ G++++AD +AIP ++
Sbjct: 210 TDNIKQKMIQEEGWIGTVWSGDAAFIAAENPDVAYVVPQEGSTIFADTYAIPKGAK 265
>gi|262164598|ref|ZP_06032336.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio mimicus VM223]
gi|262173221|ref|ZP_06040898.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio mimicus MB-451]
gi|424808660|ref|ZP_18234057.1| Spermidine/putrescine-binding periplasmic protein 2 [Vibrio mimicus
SX-4]
gi|449144614|ref|ZP_21775428.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio mimicus
CAIM 602]
gi|261890579|gb|EEY36566.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio mimicus MB-451]
gi|262026978|gb|EEY45645.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio mimicus VM223]
gi|342324225|gb|EGU20007.1| Spermidine/putrescine-binding periplasmic protein 2 [Vibrio mimicus
SX-4]
gi|449079745|gb|EMB50665.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio mimicus
CAIM 602]
Length = 343
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 85/214 (39%), Gaps = 42/214 (19%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQ 52
NG W DLW + ++ +++ R+V G ++ ++L L N
Sbjct: 141 NGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEDEIKKAYESLVALKNN 200
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V L++ + G+ + + W+ + M + V+P+ GA LW D + IP+ S
Sbjct: 201 VLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS 260
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNT-----RVKLPEELLKGKP 161
+ L H+++ F Q ++L + + R LP E L+ P
Sbjct: 261 K------------NISLAHKFVNFMYQPENQAEIVKSLGYASATNGGRALLPPE-LRDNP 307
Query: 162 SLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
++ P E + + EF + TL+ YE
Sbjct: 308 TI-------FPSEEDMKKGEFTNDVGPETLAIYE 334
>gi|419955797|ref|ZP_14471919.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
gi|387967393|gb|EIK51696.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
Length = 361
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 37/201 (18%)
Query: 4 NGFKDWKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLA 47
+ W L+ P+ A + I+M++S E+I ++ A ++ L
Sbjct: 147 DSIDSWAVLFEPQNAEKLASCGIAMLDSADEMIPAVLNYLGLDPNSENPADYRKAEEKLL 206
Query: 48 LLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASL 101
+ VR F + Y+ G++ +A G+S DV A R +A +PK G +L
Sbjct: 207 AVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNL 266
Query: 102 WADLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKP 161
W D+ AIPA + G H +I++ L+ A + V LK
Sbjct: 267 WFDMLAIPADA------------GNVEQAHAFIDYLLRPAVIAAVSDYVGYANPNLKAGE 314
Query: 162 SLDTKLI---AGVPPAEILAR 179
+D ++ A PP E+L R
Sbjct: 315 LMDQEVRNDPAVYPPQEVLDR 335
>gi|13475822|ref|NP_107392.1| ABC transporter substrate-binding protein [Mesorhizobium loti
MAFF303099]
gi|14026581|dbj|BAB53178.1| ABC transporter, periplasmic binding-protein [Mesorhizobium loti
MAFF303099]
Length = 365
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 22/127 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVIGTQ----AAAGRIAVQQNLALLGN-------Q 52
W L+ PE A + I++V++P E + G +++L G+
Sbjct: 156 WDVLFKPENAAKLKDCGINIVDAPEETVAVAMNYLGKDGDSKKKEDLEAGGDIYTKIRSY 215
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
VR F+ + Y+ GD I++GWS DVL A R NV ++P+ G +W D
Sbjct: 216 VRTFNSSSYINDLANGDKCISIGWSGDVLQAKNRAKEAKNGVNVEYLIPREGTYMWFDNL 275
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 276 AIPADAK 282
>gi|392945801|ref|ZP_10311443.1| spermidine/putrescine-binding periplasmic protein [Frankia sp. QA3]
gi|392289095|gb|EIV95119.1| spermidine/putrescine-binding periplasmic protein [Frankia sp. QA3]
Length = 423
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 21/118 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREV-----IGT------------QAAAGRIAVQQNLALLGN 51
+ DL+ P+ AG++ M +++ +GT + AA ++ Q+ +
Sbjct: 224 YDDLFDPKFAGKVGMFGDNQDLPNLALLGTGVDPAKSTPDDWKKAAAKLTAQRRDGI--- 280
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
VR + Y+ GD+WI++ WS DV + +N+ VVP G LW D IP
Sbjct: 281 -VRKYYDQSYIDALAGGDLWISMAWSGDVYQQIATGTNLKFVVPAEGGLLWTDNMCIP 337
>gi|258622120|ref|ZP_05717146.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio mimicus
VM573]
gi|258624044|ref|ZP_05718996.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio mimicus
VM603]
gi|258583654|gb|EEW08451.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio mimicus
VM603]
gi|258585444|gb|EEW10167.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio mimicus
VM573]
Length = 370
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 85/214 (39%), Gaps = 42/214 (19%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQ 52
NG W DLW + ++ +++ R+V G ++ ++L L N
Sbjct: 168 NGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEDEIKKAYESLVALKNN 227
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V L++ + G+ + + W+ + M + V+P+ GA LW D + IP+ S
Sbjct: 228 VLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS 287
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNT-----RVKLPEELLKGKP 161
+ L H+++ F Q ++L + + R LP E L+ P
Sbjct: 288 K------------NISLAHKFVNFMYQPENQAEIVKSLGYASATNGGRALLPPE-LRDNP 334
Query: 162 SLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
++ P E + + EF + TL+ YE
Sbjct: 335 TI-------FPSEEDMKKGEFTNDVGPETLAIYE 361
>gi|392423251|ref|YP_006459855.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
gi|390985439|gb|AFM35432.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
Length = 361
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 39/197 (19%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
W ++ PE A + I+ ++S E+I ++ AA ++ L +
Sbjct: 152 WAVIFEPENAEKLASCGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKAEEKLLAVRPH 211
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
VR F + Y+ G++ +A G+S DV A R +A +PK GA+LW D+
Sbjct: 212 VRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGVEIAYAIPKEGANLWFDML 271
Query: 107 AIPA-ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
AIPA AS +E H +I + L+ + V LK +D
Sbjct: 272 AIPADASNVEEA-------------HAFINYLLRPEVIAAVSDYVGYANPNLKAGELMDQ 318
Query: 166 KLIAGV---PPAEILAR 179
++ PP E+L R
Sbjct: 319 EVRGDASVYPPQEVLDR 335
>gi|317495185|ref|ZP_07953555.1| extracellular solute-binding protein [Gemella morbillorum M424]
gi|316914607|gb|EFV36083.1| extracellular solute-binding protein [Gemella morbillorum M424]
Length = 358
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 82/209 (39%), Gaps = 32/209 (15%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGT--QAAAGRIA---------VQQNLALLGNQVR 54
F+ W DLW L I +++ RE++G Q+ + ++ L LL V+
Sbjct: 155 FEKWDDLWDARLENNILLIDGAREMMGIALQSEGNSVNDTNEVNLNLAEKKLELLHKNVK 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + + W++V +S D + N+ VPK G +LW D IP S+
Sbjct: 215 AINADEKKMLMINNEAWVSVVFSGDASAIMTENENMVYSVPKEGTNLWFDNIVIPKTSKN 274
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
E +++I F L Q A+ + + T + +ELL + D +
Sbjct: 275 EDAA------------YKFINFMLRPENAAQNAKFIGYATPNEKAKELLPEDVTSDEQF- 321
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYEWL 197
P + + E E LS L Y L
Sbjct: 322 --YPDLSSIGKAEVYEDLSPEMLQLYNDL 348
>gi|386814709|ref|ZP_10101927.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
gi|386419285|gb|EIJ33120.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
Length = 344
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 32/198 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRI-----------AVQQNLALLGNQVRLFD 57
W DLW P+ G++ + + REV A ++L L V +F+
Sbjct: 147 WADLWDPKWEGKLLLTDDVREVFHMALKKNGFSTNSTNPDEIKAAYEDLQKLMPNVLVFN 206
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ F GDV + + WS +V+ A + ++ + PK GA W D +AIPA +
Sbjct: 207 ADAPREPFLAGDVNLGMIWSGEVVMAQEENPDIQYIFPKEGAGFWVDSFAIPAGAENVDN 266
Query: 118 QIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLIAGV 171
H++I+F L + L ++T ++LL K + ++I
Sbjct: 267 ------------AHKFIDFMLRPEVGQKVVEELGYSTPNTASQDLLPEK-VRNNRVI--F 311
Query: 172 PPAEILARCEFLEPLSEA 189
PP + + + EF + + +A
Sbjct: 312 PPTDAVEKGEFQKDVGDA 329
>gi|145634350|ref|ZP_01790060.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
influenzae PittAA]
gi|145641348|ref|ZP_01796927.1| ABC transporter ATPase component [Haemophilus influenzae R3021]
gi|148826818|ref|YP_001291571.1| ABC transporter ATPase [Haemophilus influenzae PittGG]
gi|145268330|gb|EDK08324.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
influenzae PittAA]
gi|145273891|gb|EDK13758.1| ABC transporter ATPase component [Haemophilus influenzae 22.4-21]
gi|148718060|gb|ABQ99187.1| ABC transporter ATPase component [Haemophilus influenzae PittGG]
gi|309751019|gb|ADO81003.1| Spermidine/putrescine ABC transporter, periplasmic-binding protein
[Haemophilus influenzae R2866]
Length = 379
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 179 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 238
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP ++
Sbjct: 239 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLNMVFPKEGPVLWVDTLAIPVTAK- 297
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
G H+ I + L A + P ++ K +L ++ A
Sbjct: 298 -------NPEG----AHKLINYMLGKKTAEKLTLAIGYPTSNIEAKKALPKEITEDPAIY 346
Query: 172 PPAEILARCEFLEPLSEA 189
P A+IL + + + +A
Sbjct: 347 PSADILKNSHWQDDVGDA 364
>gi|229844198|ref|ZP_04464339.1| ABC transporter ATPase component [Haemophilus influenzae 6P18H1]
gi|229813192|gb|EEP48880.1| ABC transporter ATPase component [Haemophilus influenzae 6P18H1]
Length = 360
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 160 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 219
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP ++
Sbjct: 220 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLNMVFPKEGPVLWVDTLAIPVTAK- 278
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
G H+ I + L A + P ++ K +L ++ A
Sbjct: 279 -------NPEG----AHKLINYMLGKKTAEKLTLAIGYPTSNIEAKKALPKEITEDPAIY 327
Query: 172 PPAEILARCEFLEPLSEA 189
P A+IL + + + +A
Sbjct: 328 PSADILKNSHWQDDVGDA 345
>gi|378697579|ref|YP_005179537.1| spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
influenzae 10810]
gi|301170095|emb|CBW29699.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Haemophilus influenzae 10810]
Length = 379
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 179 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 238
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP ++
Sbjct: 239 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLNMVFPKEGPVLWVDTLAIPVTAK- 297
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
G H+ I + L A + P ++ K +L ++ A
Sbjct: 298 -------NPEG----AHKLINYMLGKKTAEKLTLAIGYPTSNIEAKKALPKEITEDPAIY 346
Query: 172 PPAEILARCEFLEPLSEA 189
P A+IL + + + +A
Sbjct: 347 PSADILKNSHWQDDVGDA 364
>gi|1573475|gb|AAC22155.1| spermidine/putrescine ABC transporter, periplasmic-binding protein
(potD) [Haemophilus influenzae Rd KW20]
Length = 312
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 34/189 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 116 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 174
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 175 NSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAK--- 231
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G H++I+F L+ A + F+ + LL + + D KL
Sbjct: 232 -----NVEG----AHKFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSAEVANDPKLF-- 280
Query: 171 VPPAEILAR 179
PPAE + +
Sbjct: 281 -PPAEEVEK 288
>gi|30995379|ref|NP_438656.2| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae Rd KW20]
gi|145638587|ref|ZP_01794196.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
PittII]
gi|260580439|ref|ZP_05848267.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae RdAW]
gi|21431815|sp|P44731.2|POTD2_HAEIN RecName: Full=Spermidine/putrescine-binding periplasmic protein 2;
Short=SPBP; Flags: Precursor
gi|145272182|gb|EDK12090.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
PittII]
gi|260092781|gb|EEW76716.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae RdAW]
gi|309750089|gb|ADO80073.1| Spermidine/putrescine ABC transporter, periplasmic-binding protein
[Haemophilus influenzae R2866]
Length = 350
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 34/189 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G H++I+F L+ A + F+ + LL + + D KL
Sbjct: 270 -----NVEGA----HKFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSAEVANDPKLF-- 318
Query: 171 VPPAEILAR 179
PPAE + +
Sbjct: 319 -PPAEEVEK 326
>gi|319897986|ref|YP_004136183.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae F3031]
gi|317433492|emb|CBY81875.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae F3031]
Length = 350
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 34/189 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G H++I+F L+ A + F+ + LL + + D KL
Sbjct: 270 -----NVEGA----HKFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSAEVANDPKLF-- 318
Query: 171 VPPAEILAR 179
PPAE + +
Sbjct: 319 -PPAEEVEK 326
>gi|145628878|ref|ZP_01784678.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 22.1-21]
gi|144979348|gb|EDJ89034.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 22.1-21]
Length = 350
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 34/185 (18%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G H++I+F L+ A + F+ + LL + + D KL
Sbjct: 270 -----NVEGA----HKFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSAEVANDLKLF-- 318
Query: 171 VPPAE 175
PPAE
Sbjct: 319 -PPAE 322
>gi|308048910|ref|YP_003912476.1| extracellular solute-binding protein [Ferrimonas balearica DSM
9799]
gi|307631100|gb|ADN75402.1| extracellular solute-binding protein family 1 [Ferrimonas balearica
DSM 9799]
Length = 345
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 34/204 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGT----QAAAGRIA----VQQNLALLGN---QVRLFD 57
WKDLW P+ + + N REV +G ++Q LL + V +F+
Sbjct: 147 WKDLWDPKWQRSLLLTNDVREVFHMALRINGHSGNSTDPEEIKQAYELLRSLMPNVLVFN 206
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA-ASRLET 116
+ F GDV + + W+ + A + + + PK GA+LW D +AIP A+ +E
Sbjct: 207 SDAPREPFLAGDVNLGMLWNGEAFMAQQEEEAIQYIYPKEGAALWVDSFAIPVNAANVEN 266
Query: 117 KQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLIAG 170
H++I+F + Q L + T + +L + S +T +
Sbjct: 267 A-------------HKFIDFMMRPEIAVQVVEYLGYTTPNETAIGMLDPEYSENTAIF-- 311
Query: 171 VPPAEILARCEFLEPLSEATLSDY 194
PP E++ + EF + + + L+ Y
Sbjct: 312 -PPEEVVKQGEFQQDVGDEALAIY 334
>gi|398984257|ref|ZP_10690526.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399011979|ref|ZP_10714307.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398116585|gb|EJM06344.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398155956|gb|EJM44383.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 362
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 21/136 (15%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK GA+LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLL 272
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTK 166
AIPA + TK+ H +I + L + V K +D +
Sbjct: 273 AIPADAS-NTKE-----------AHAFINYLLDPQVIAKVSASVGYANPNPSAKQYMDPE 320
Query: 167 LIAG---VPPAEILAR 179
L+ PP E+L +
Sbjct: 321 LVNNPEVYPPQEVLDK 336
>gi|145630323|ref|ZP_01786104.1| ribokinase [Haemophilus influenzae R3021]
gi|144984058|gb|EDJ91495.1| ribokinase [Haemophilus influenzae R3021]
Length = 350
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 34/189 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G H++I+F L+ A + F+ + LL + + D KL
Sbjct: 270 -----NVEGA----HKFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSAEVANDPKLF-- 318
Query: 171 VPPAEILAR 179
PPAE + +
Sbjct: 319 -PPAEEVEK 326
>gi|145634502|ref|ZP_01790211.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittAA]
gi|145268047|gb|EDK08042.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittAA]
Length = 350
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 34/185 (18%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G H++I+F L+ A + F+ + LL + + D KL
Sbjct: 270 -----NVEGA----HKFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSAEVANDPKLF-- 318
Query: 171 VPPAE 175
PPAE
Sbjct: 319 -PPAE 322
>gi|336124226|ref|YP_004566274.1| Spermidine/putrescine-binding protein [Vibrio anguillarum 775]
gi|335341949|gb|AEH33232.1| Spermidine/putrescine-binding protein [Vibrio anguillarum 775]
Length = 349
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 83/212 (39%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 151 NDFQSWGDLWNPELKGQLMLMDDTREVFHIALRKLGYSGNTTDEKQIDEAYAELQKLMPN 210
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 211 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 270
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H I+F L Q +R + T VK E K P+L
Sbjct: 271 K------------NVEAAHMMIDFLLRPEIAEQISRDTGYLTGVKASNEKFKDSPAL--- 315
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P + L R E+ + E T+ ++ +
Sbjct: 316 ----FPSQDDLDRVEWQSAVGEKTVQYEDYFM 343
>gi|145633546|ref|ZP_01789275.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 3655]
gi|378696696|ref|YP_005178654.1| polyamine transporter subunit [Haemophilus influenzae 10810]
gi|144985915|gb|EDJ92523.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 3655]
gi|301169215|emb|CBW28812.1| polyamine transporter subunit [Haemophilus influenzae 10810]
Length = 350
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 34/189 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G H++I+F L+ A + F+ + LL + + D KL
Sbjct: 270 -----NVEGA----HKFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSAEVANDPKLF-- 318
Query: 171 VPPAEILAR 179
PPAE + +
Sbjct: 319 -PPAEEVEK 326
>gi|417952019|ref|ZP_12595093.1| spermidine/putrescine transport system substrate-binding protein
[Vibrio splendidus ATCC 33789]
gi|342803068|gb|EGU38448.1| spermidine/putrescine transport system substrate-binding protein
[Vibrio splendidus ATCC 33789]
Length = 344
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 38/211 (18%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQ----AAAGRIAVQQ-------NLALLGNQVR 54
F+ W DLW PEL G++ M++ REV +G ++ L L V
Sbjct: 148 FQSWADLWKPELEGQLMMMDDTREVFHIALRKLGYSGNTTNEKEIDEAYAELQKLMPNVL 207
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA-ASR 113
+F+ + + G+V + + W+ A + +V PK G W D +AI + A+
Sbjct: 208 VFNSDNPGAPYMSGEVGLGMLWNGSAAAAQNEGLPIKLVFPKEGGIGWVDNFAISSGATN 267
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKL 167
+E H+ I+F L QT+R + T VK E K P+L
Sbjct: 268 VEA-------------AHKMIDFLLRPEIAEQTSRDTGYLTAVKASNEKFKDSPAL---- 310
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ ++ +
Sbjct: 311 ---FPSQEDLDRVEWQAAVGDKTVKYEDYFM 338
>gi|417852728|ref|ZP_12498229.1| PotD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
gi|338216363|gb|EGP02483.1| PotD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
Length = 348
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 11/119 (9%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVR 54
F+ W+DLW E G++ M++ PRE+ TQ A + L L +
Sbjct: 148 FQSWRDLWNAEFKGKVQMLDDPRELFNIALLKMGKDPNTQDPAVLKEAYEELLKLRPNIL 207
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F+ + F G+ I + W+ + A + V ++ PK G LW D AIP+ ++
Sbjct: 208 SFNSDNPASTFISGETDIGLLWNGSIRIAKNEGATVEMIYPKEGTMLWIDNLAIPSNAK 266
>gi|257066715|ref|YP_003152971.1| family 1 extracellular solute-binding protein [Anaerococcus
prevotii DSM 20548]
gi|256798595|gb|ACV29250.1| extracellular solute-binding protein family 1 [Anaerococcus
prevotii DSM 20548]
Length = 359
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 89/218 (40%), Gaps = 40/218 (18%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN------------LALLGN-- 51
F WK+LW P+ G I + RE +G A +++ + L+GN
Sbjct: 155 FDSWKNLWDPKFEGEILSFDGARETMGIGLLANNLSLNTEDPKKLTEIRNELIGLMGNVK 214
Query: 52 -----QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 106
++R++ + + + + +S D A++ +++ V+PK G+++W D
Sbjct: 215 AILADEIRMY--------MALEEANVGLTFSGDASSAIESNEDLSYVIPKEGSNIWFDTM 266
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKPSLD 164
IP S+ + + I+ + E Q A + + T K +L+ + D
Sbjct: 267 VIPKTSK--------NKKAAYAFINFMLEPENAAQNADYIWYATPNKKAMDLIDSEARND 318
Query: 165 TKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
L P EI+ + E + L + + Y L +L+
Sbjct: 319 KTL---YPDDEIINKLEVFKALDKESTILYNDLFLDLK 353
>gi|68250141|ref|YP_249253.1| spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
influenzae 86-028NP]
gi|68058340|gb|AAX88593.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Haemophilus influenzae 86-028NP]
Length = 388
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 188 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 247
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP ++
Sbjct: 248 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLNMVFPKEGPVLWVDTLAIPVTAK- 306
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI---AGV 171
G H+ I + L A + P ++ K +L ++ A
Sbjct: 307 -------NPEG----AHKLINYMLGKKTAEKLTLAIGYPTSNIEAKKALPKEITEDPAIY 355
Query: 172 PPAEILARCEFLEPLSEA 189
P A+IL + + + +A
Sbjct: 356 PSADILKNSHWQDDVGDA 373
>gi|408378346|ref|ZP_11175943.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
albertimagni AOL15]
gi|407747483|gb|EKF59002.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
albertimagni AOL15]
Length = 366
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 21/143 (14%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
VR F+ + Y+ GD+ + +GWS D+L A R + V+PK G +W D
Sbjct: 216 SVRTFNSSAYIDDLANGDICMTIGWSGDILQAKARAEEANNGVEINYVIPKEGTYMWFDN 275
Query: 106 WAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
AIPA ++ + H++I F ++ + V+ L K LD
Sbjct: 276 MAIPADAKNVAEA------------HEFINFLMRPDVIAKASNYVQYANGNLASKELLDP 323
Query: 166 KLI---AGVPPAEILARCEFLEP 185
++ A PP E++A+ + P
Sbjct: 324 EVKDNPAVYPPEEVMAKLFTISP 346
>gi|15644127|ref|NP_229176.1| spermidine/putrescine ABC transporter substrate-binding protein
[Thermotoga maritima MSB8]
gi|418045432|ref|ZP_12683527.1| extracellular solute-binding protein family 1 [Thermotoga maritima
MSB8]
gi|4981936|gb|AAD36445.1|AE001791_7 spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Thermotoga
maritima MSB8]
gi|351676317|gb|EHA59470.1| extracellular solute-binding protein family 1 [Thermotoga maritima
MSB8]
Length = 336
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 78/196 (39%), Gaps = 28/196 (14%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
K W +L GR+++++ REV+G T+ +Q + +
Sbjct: 143 KSWSIFDREDLRGRMTLLDDMREVLGAALKYLGYSVNTKNPKELEEAKQVVLRWKKNIAK 202
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN--VAVVVPKSGASLWADLWAIPAASR 113
FD + Y G+ W+ G++ DV + +PK G +LW D IP ++
Sbjct: 203 FDASSYADGIVSGEYWVVHGYAEDVYQRIPEGEEKYFDFFIPKEGGTLWIDNMVIPKGAK 262
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP 173
L +++I F L+ A + LP ++ + + T+ I +
Sbjct: 263 ------------NVDLAYKFINFILEPENAAKIADYLGLPSPNVEARKYMQTEPIYTI-- 308
Query: 174 AEILARCEFLEPLSEA 189
E L CEF+E + EA
Sbjct: 309 -EDLKNCEFIEDVGEA 323
>gi|403253681|ref|ZP_10919982.1| spermidine/putrescine ABC transporter substrate-binding protein
[Thermotoga sp. EMP]
gi|402811215|gb|EJX25703.1| spermidine/putrescine ABC transporter substrate-binding protein
[Thermotoga sp. EMP]
Length = 335
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 78/196 (39%), Gaps = 28/196 (14%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
K W +L GR+++++ REV+G T+ +Q + +
Sbjct: 142 KSWSIFDREDLRGRMTLLDDMREVLGAALKYLGYSVNTKNPKELEEAKQVVLRWKKNIAK 201
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN--VAVVVPKSGASLWADLWAIPAASR 113
FD + Y G+ W+ G++ DV + +PK G +LW D IP ++
Sbjct: 202 FDASSYADGIVSGEYWVVHGYAEDVYQRIPEGEEKYFDFFIPKEGGTLWIDNMVIPKGAK 261
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP 173
L +++I F L+ A + LP ++ + + T+ I +
Sbjct: 262 ------------NVDLAYKFINFILEPENAAKIADYLGLPSPNVEARKYMQTEPIYTI-- 307
Query: 174 AEILARCEFLEPLSEA 189
E L CEF+E + EA
Sbjct: 308 -EDLKNCEFIEDVGEA 322
>gi|148827692|ref|YP_001292445.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittGG]
gi|148718934|gb|ABR00062.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittGG]
Length = 350
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 34/185 (18%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G H++I+F L+ A + F+ + LL + + D KL
Sbjct: 270 -----NVEGA----HKFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSAEVANDPKLF-- 318
Query: 171 VPPAE 175
PPAE
Sbjct: 319 -PPAE 322
>gi|37520928|ref|NP_924305.1| periplasmic spermidine/putrescine-binding protein [Gloeobacter
violaceus PCC 7421]
gi|35211923|dbj|BAC89300.1| glr1359 [Gloeobacter violaceus PCC 7421]
Length = 361
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W+DLW P GR+ +++ EV+G T+ A + LA L ++LFD
Sbjct: 157 WEDLWDPAFKGRVVLLDDEFEVLGMALQTLGFDKNTKDPAQLAKARAKLAQLRPNIKLFD 216
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G+VW+ W+ + A + + + P G +W D WA+P
Sbjct: 217 SDSPKTALLSGEVWLGQVWNGEAALAQRENPAIRYLCPAEGCGIWHDNWAVP 268
>gi|373466353|ref|ZP_09557671.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sp. oral taxon 851 str. F0397]
gi|371760719|gb|EHO49392.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sp. oral taxon 851 str. F0397]
Length = 350
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 78/189 (41%), Gaps = 34/189 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T R A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIRTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+ I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEAAIGMIWNGSAYLAHKENPSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLKG--KPSL--DTKLIAG 170
V G H++I+F L + A+ + +P E +K P L D KL
Sbjct: 270 -----NVEG----AHKFIDFLLRPENAKVVVERMGFSMPNEGVKNLLSPELANDPKLF-- 318
Query: 171 VPPAEILAR 179
PPAE + +
Sbjct: 319 -PPAEEVEK 326
>gi|400289028|ref|ZP_10791060.1| extracellular solute-binding protein [Psychrobacter sp. PAMC 21119]
Length = 377
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 39/208 (18%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG----TQAAAGRI-------AVQQNLALLGNQVRLFD 57
W DLW P+ G++ + N REV G T +G A L L V+ F+
Sbjct: 178 WNDLWDPKYKGQVMLTNDVREVFGMALLTLGYSGNSRNPDEIKAAYDKLTTLMPNVKTFN 237
Query: 58 RTHYLKVFGIGDVWIAVGWSSD-VLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ G+ + + W+ + V+ + ++++ P GA LW D + IP +
Sbjct: 238 SDATRMPYIEGETSLGMTWNGEAVMANDEGLTSLVYKYPSEGAILWMDNFVIPKNA---- 293
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG------ 170
KQ+ H++I++ L+ P N ++ + EE+ P++ + +
Sbjct: 294 KQVDA--------AHKFIDYLLR-----PENAKI-VSEEIGYASPNIAARELMDESVRNN 339
Query: 171 ---VPPAEILARCEFLEPLSEATLSDYE 195
P EILA+ EF E + + L Y+
Sbjct: 340 PTIYPSQEILAKAEFQEDVGDEALQVYQ 367
>gi|293334297|ref|NP_001170380.1| hypothetical protein [Zea mays]
gi|224035473|gb|ACN36812.1| unknown [Zea mays]
gi|414585610|tpg|DAA36181.1| TPA: hypothetical protein ZEAMMB73_943866 [Zea mays]
Length = 145
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 107 AIPAASRLETKQIGG----RVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPS 162
A P A L + G RV G +P L+T L + P + K +
Sbjct: 53 AEPEAHLLHSSTSGSTSACRVLGAYPSAKTSSPEHLRTPLYLESPVPPEAPRDSNKRRTK 112
Query: 163 LDTKLIAGVPPAEILARCEFLEPLSEATLSDY 194
LDT L+ GVPP EIL RCEFLEPLS L DY
Sbjct: 113 LDTNLVRGVPPPEILERCEFLEPLSGKALEDY 144
>gi|386847569|ref|YP_006265582.1| Spermidine/putrescine-binding periplasmic protein [Actinoplanes sp.
SE50/110]
gi|359835073|gb|AEV83514.1| Spermidine/putrescine-binding periplasmic protein [Actinoplanes sp.
SE50/110]
Length = 416
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 11 DLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQNLALLGNQV 53
DLW P+ G++ M++ E+ + AA ++ Q++ + V
Sbjct: 203 DLWDPKFKGKVGMMSDSTELANFGLLAAGVKPGESNEADWRKAAAKLKQQRDAGI----V 258
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLWAIPAAS 112
R + Y+ G G+VW+ WS DV + +N+ V+P+ G ++W D +AIP +
Sbjct: 259 RKYYEQDYVDALGKGEVWLTQAWSGDVFQKNLSDGTNLKFVIPQEGGTIWTDNFAIPVTA 318
>gi|365926131|ref|ZP_09448894.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
mali KCTC 3596 = DSM 20444]
gi|420267015|ref|ZP_14769433.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
mali KCTC 3596 = DSM 20444]
gi|394424140|gb|EJE97319.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
mali KCTC 3596 = DSM 20444]
Length = 356
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 91/212 (42%), Gaps = 40/212 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-TQAAAGRIAVQQNL------------------A 47
K W DLW P I +++ REV+G T + G+ N+ A
Sbjct: 157 KHWDDLWNPRFKNSIMLIDGAREVMGLTLNSQGKSVNDTNVKDLQAAYEKLKKLSPNVKA 216
Query: 48 LLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 107
+L ++++++ + +AV +S + + + ++ ++P+ G+++W D
Sbjct: 217 ILADEIKVY--------MAQDEAPLAVSYSGEAMEMMDNNKHLHYIIPEEGSNIWFDNMV 268
Query: 108 IPAASRLETKQIGGRVRGPFPLIHQWIE--FCLQTARALPFNTRVKLPEELLKGKPSLDT 165
IP ++ ++G + ++ +E Q A + + T K +++L K D
Sbjct: 269 IPRTAK--------NIKGAYAFLNFMLEPKNAAQNAEYVAYATPNKAAKKMLP-KSMQDD 319
Query: 166 KLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
K++ P + ++ E + LS+ LS Y L
Sbjct: 320 KVM--YPTNKTISHLEVYDALSQKNLSKYNDL 349
>gi|149187665|ref|ZP_01865962.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Vibrio shilonii AK1]
gi|148838545|gb|EDL55485.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Vibrio shilonii AK1]
Length = 369
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 29/131 (22%)
Query: 9 WKDLWLPELAGRIS-----MVNSPREVIGTQAAAGRIAVQQN-----------LALLGNQ 52
W ++ PE ++S +N+P E++ AA I N LALL Q
Sbjct: 160 WDLVFKPENMEKLSKCGVGFLNAPTEIMA--AALNYIGKDPNSTDPNAYKKDALALL-KQ 216
Query: 53 VR----LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLW 102
VR F + Y+ GDV +A+GWS DVL A R + VA +PK GA W
Sbjct: 217 VRPYVTYFHSSQYINDLANGDVCVAIGWSGDVLQAADRAAEADNGVEVAYSIPKEGALAW 276
Query: 103 ADLWAIPAASR 113
DL AIP ++
Sbjct: 277 FDLMAIPKEAK 287
>gi|93006986|ref|YP_581423.1| extracellular solute-binding protein [Psychrobacter cryohalolentis
K5]
gi|92394664|gb|ABE75939.1| extracellular solute-binding protein, family 1 [Psychrobacter
cryohalolentis K5]
Length = 374
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 39/208 (18%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG----TQAAAGRI-------AVQQNLALLGNQVRLFD 57
W DLW PE G++ ++N REV G T +G A + L L V+ F+
Sbjct: 175 WNDLWRPEYKGQVMLMNDMREVFGMALLTLGYSGNSRNPDEIKAAYEKLTTLMPNVKTFN 234
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKR-MSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ G+ + + W+ + + A ++++ P GA LW D + IP +
Sbjct: 235 SDASRMPYMEGETSVGMTWNGEAIIANSEGLTSLVYKYPTEGAILWMDNFVIPKNAT--- 291
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL--------DTKLI 168
Q+ H++I++ L+ P N+++ + EE+ P++ D K
Sbjct: 292 -QVDA--------AHKFIDYLLR-----PENSKI-VSEEIGYASPNIAAREMMPDDVKNN 336
Query: 169 AGVPPA-EILARCEFLEPLSEATLSDYE 195
+ P+ ++LA+ EF E + + L Y+
Sbjct: 337 PTIYPSKDVLAKAEFQEDVGDEALQVYQ 364
>gi|229844342|ref|ZP_04464482.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 6P18H1]
gi|229812591|gb|EEP48280.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 6P18H1]
Length = 350
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 34/189 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G H++I+F L+ A + F+ + LL + + D KL
Sbjct: 270 -----NVEGA----HKFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSTEVANDPKLF-- 318
Query: 171 VPPAEILAR 179
PPAE + +
Sbjct: 319 -PPAEEVEK 326
>gi|404418332|ref|ZP_11000099.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus arlettae CVD059]
gi|403488925|gb|EJY94503.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus arlettae CVD059]
Length = 357
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 34/217 (15%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAV-----------QQNLALLGNQ 52
+ F W+ L+ P+ I +V+ RE+IG ++ +Q+L L Q
Sbjct: 153 DNFTSWESLYNPKYEEDILLVDGAREIIGLSLNKLGYSLNDKNPQHLRQAEQDLTQLAPQ 212
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
+R + + IAV WS P ++ + VVPK G++LW D AIP +
Sbjct: 213 IRGVVGDEVTMMLEQHEANIAVVWSGVAAPIIQNNPDFNYVVPKEGSNLWFDNMAIPKTA 272
Query: 113 RLETKQIGGRVRGPFPLIH-------QWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
+ + G F L +W+ + +A R LPEE+ S D
Sbjct: 273 Q---NKAGAYKFMNFLLDKKVSKQNTEWVGYATPNKQA-----REALPEEI-----SDDQ 319
Query: 166 KLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
+ P R E E L + TLS+Y N +
Sbjct: 320 RF---YPNRTTQERLEVYEDLGQKTLSEYNEKFLNFK 353
>gi|374604938|ref|ZP_09677885.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
dendritiformis C454]
gi|374389461|gb|EHQ60836.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
dendritiformis C454]
Length = 344
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQ-AAAGRI----------AVQQNLALLGNQVRLFD 57
W DLW E G++ +++ RE+IG AG+ A +L L V FD
Sbjct: 147 WADLWKDEYKGKVLLLDDNREIIGMALKKAGKSNSADNEADINAAADDLRKLVPNVVAFD 206
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + + WI WS D + +VA VVP+ G++++AD +AIP ++
Sbjct: 207 TDNIKQKMIQEEGWIGTVWSGDAAFIAEENPDVAYVVPQEGSTIFADTYAIPKGAK 262
>gi|339482351|ref|YP_004694137.1| extracellular solute-binding protein family 1 [Nitrosomonas sp.
Is79A3]
gi|338804496|gb|AEJ00738.1| extracellular solute-binding protein family 1 [Nitrosomonas sp.
Is79A3]
Length = 371
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 13 WLPELAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVR-----------LFDRTHY 61
+L ++ GR+++++SPRE++ A + NQ + F T Y
Sbjct: 172 YLQKIKGRVTVLDSPRELMAAALLYLGYAANDQDEVHWNQAKELIIRAKPYWAAFSNTSY 231
Query: 62 LKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP---AASRLETKQ 118
++ IGD+W+ G+S+D+ A A+ K+G D +AIP A L++
Sbjct: 232 IREIAIGDLWVVHGYSNDLFQA-------ALDAKKTGRHFTID-YAIPKQGAVMSLDSMV 283
Query: 119 IGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG---VPPAE 175
+ + P L HQ+I F L + + + KP + +L+ P E
Sbjct: 284 LHKSGKHP-GLAHQFINFMLDGKNSAELTNLIGSGNPNIDAKPFIRPELLQNKVIFPDEE 342
Query: 176 ILARCEFLEPLSE 188
L+R E + L+
Sbjct: 343 SLSRLEMITDLNH 355
>gi|148270537|ref|YP_001244997.1| extracellular solute-binding protein [Thermotoga petrophila RKU-1]
gi|281412845|ref|YP_003346924.1| extracellular solute-binding protein family 1 [Thermotoga
naphthophila RKU-10]
gi|147736081|gb|ABQ47421.1| extracellular solute-binding protein, family 1 [Thermotoga
petrophila RKU-1]
gi|281373948|gb|ADA67510.1| extracellular solute-binding protein family 1 [Thermotoga
naphthophila RKU-10]
Length = 336
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 78/196 (39%), Gaps = 28/196 (14%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
K W +L GR+++++ REV+G T+ +Q + +
Sbjct: 143 KSWSIFDREDLRGRMTLLDDMREVLGAALKYLGYSVNTKNPKELEEAKQVVLRWKKNIAK 202
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAV--KRMSNVAVVVPKSGASLWADLWAIPAASR 113
FD + Y G+ W+ G++ DV + +PK G +LW D IP ++
Sbjct: 203 FDASSYADGVVSGEYWVVHGYAEDVYQRIPEGEEEYFDFFIPKEGGTLWIDNMVIPKGAK 262
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP 173
L +++I F L+ A + LP ++ + + T+ I +
Sbjct: 263 ------------NVDLAYKFINFILEPENAAKIADYLGLPSPNVEARKYMQTEPIYTI-- 308
Query: 174 AEILARCEFLEPLSEA 189
E L CEF+E + EA
Sbjct: 309 -EDLKNCEFIEDVGEA 323
>gi|111226166|ref|YP_716960.1| ABC transporter substrate-binding protein [Frankia alni ACN14a]
gi|111153698|emb|CAJ65456.1| ABC-transporter polyamine-binding lipoprotein [Frankia alni ACN14a]
Length = 424
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 21/118 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREV-------IGT----------QAAAGRIAVQQNLALLGN 51
+ DL+ P+ AG++ M +++ IG + AA ++ Q+ +
Sbjct: 225 YNDLFDPKFAGKVGMFGDNQDLPNLALLGIGVDPAKSTPDDWKKAAAKLTAQRRDGI--- 281
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
VR + Y+ GD+WI++ WS DV + +N+ VVP G LW D IP
Sbjct: 282 -VRKYYDQSYIDALAGGDLWISMAWSGDVYQQIATGTNLKFVVPSEGGLLWTDNMCIP 338
>gi|376297850|ref|YP_005169080.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
ND132]
gi|323460412|gb|EGB16277.1| extracellular solute-binding protein family 1 [Desulfovibrio
desulfuricans ND132]
Length = 344
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 36/214 (16%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLAL 48
+ E+ + DLW PE+ R+ + N PREV T A + A ++ L
Sbjct: 138 LGESAVTSYADLWKPEMKDRLLLPNDPREVFAIALKSLGYSLNDTDPAHLKQAYEK-LKG 196
Query: 49 LGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 108
L VR+FD + G+V + V W+ + A + + V PK G SLW D I
Sbjct: 197 LMPYVRVFDSDSPKQALLSGEVAVGVIWNGEAYVANQENPEIKYVYPKEGFSLWMDSLCI 256
Query: 109 PAASRLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVKLPEELLKGKPS 162
P ++ + H ++ + L+ + + ++T ++ E L +
Sbjct: 257 PKGAKNLDEA------------HTFLNYLLRPDVAAAISTEMGYSTPNEVASEFLPAEVR 304
Query: 163 LDTKLIAGVPPAEILARCEFLEPLSEA--TLSDY 194
D ++ P A +R EF + + EA T DY
Sbjct: 305 -DNPIV--YPDATTASRGEFQDDIGEAMKTYEDY 335
>gi|344341161|ref|ZP_08772083.1| extracellular solute-binding protein family 1 [Thiocapsa marina
5811]
gi|343799041|gb|EGV16993.1| extracellular solute-binding protein family 1 [Thiocapsa marina
5811]
Length = 367
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 43/199 (21%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVIGTQAAAGRIAVQQN-------------LALLG 50
W ++ PE A + IS+++ P EV AA + N + +
Sbjct: 158 WALVFDPETASKLGDCGISLLDDPTEVY--SAALAYLGKDPNSLDKDDLDAASALIKAIH 215
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWAD 104
VR F + Y+ GD+ +A+G+S DV A R + V+P+ GA++W D
Sbjct: 216 PHVRYFHSSQYMSDLANGDLCVAMGYSGDVFQAQSRAEEAGKGVVIDYVIPREGAAVWTD 275
Query: 105 LWAIPAASRLETKQIGGRVRGPFP-LIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL 163
+ AIP P P H +I + LQ A + V L P L
Sbjct: 276 VMAIPK-------------DAPNPAAAHAFIAYMLQPAAIAAVSNEVYYANPNLAATPLL 322
Query: 164 DTKL---IAGVPPAEILAR 179
D + A PP E+ R
Sbjct: 323 DDAVREDPAIYPPTEVKER 341
>gi|148825225|ref|YP_001289978.1| cytoplasmic sugar-binding protein [Haemophilus influenzae PittEE]
gi|229846583|ref|ZP_04466691.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
7P49H1]
gi|148715385|gb|ABQ97595.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
PittEE]
gi|229810676|gb|EEP46394.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
7P49H1]
Length = 350
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 34/189 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A K ++ V PK GA W D +AIP +++
Sbjct: 213 NSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAIPNSAQ--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G H++I+F L+ A + F+ + LL + + D KL
Sbjct: 270 -----NVEGA----HKFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSAEVANDPKLF-- 318
Query: 171 VPPAEILAR 179
PPAE + +
Sbjct: 319 -PPAEEVEK 326
>gi|424923080|ref|ZP_18346441.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304240|gb|EJZ58202.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 362
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 35/148 (23%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK GA+LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLL 272
Query: 107 AIPAA-----------SRLETKQIGGRVRG------PFPLIHQWIEFCLQTARALPFNTR 149
A+PA + L Q+ +V P P Q+++ L + N
Sbjct: 273 AVPADAANPKEAHAFINYLLDPQVIAKVSASVGYANPNPPAKQYMDVALVS------NPE 326
Query: 150 VKLPEELLKGKPSLDTKLIAGVPPAEIL 177
V P+E+ LD I+ PP I+
Sbjct: 327 VYPPQEV------LDKLYISTTPPQSIM 348
>gi|312881643|ref|ZP_07741421.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309370706|gb|EFP98180.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 345
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 11/119 (9%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQVR 54
F W DLW PEL G+I +++ REV G +I + + L L V
Sbjct: 149 FTSWSDLWRPELKGQIMLMDDTREVFHIALKKLGFSGNSTDPNQIDSAFEELKTLMPNVL 208
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
LF+ + + G+V + + W+ A K N+ +V PK G W D +AIP +
Sbjct: 209 LFNSDNPAAPYLSGEVGVGMLWNGSAAAAQKEGLNLQLVFPKEGGIGWVDNFAIPKGAH 267
>gi|149191936|ref|ZP_01870168.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio shilonii
AK1]
gi|148834241|gb|EDL51246.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio shilonii
AK1]
Length = 344
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 78/203 (38%), Gaps = 36/203 (17%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVR 54
F W DLW PEL G++ +++ REV T A L L V
Sbjct: 148 FTSWADLWKPELEGQLMLMDDTREVFHIALRKLGYSGNTTDKAQIDEAYTELQKLMPNVL 207
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+F+ + + G+V + + W+ A + +V PK G W D +AI + +R
Sbjct: 208 VFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGLPIKLVFPKEGGIGWVDNFAISSGAR- 266
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
H+ I+F L Q +R + T VK E K P+L
Sbjct: 267 -----------NVEAAHKMIDFLLRPEIAEQISRDTGYLTAVKASNEKFKDSPAL----- 310
Query: 169 AGVPPAEILARCEFLEPLSEATL 191
P E L R E+ + + + T+
Sbjct: 311 --FPSQEDLDRVEWQDAVGDKTV 331
>gi|431929348|ref|YP_007242382.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
gi|431827635|gb|AGA88752.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
Length = 361
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 39/197 (19%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
W ++ PE A + I+ ++S E+I ++ AA ++ L +
Sbjct: 152 WSVIFEPENAAKLASCGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKAEEKLLAVRPH 211
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
VR F + Y+ G++ +A G+S DV A R +A +P GA+LW D+
Sbjct: 212 VRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPAEGANLWFDML 271
Query: 107 AIPA-ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
AIPA AS +E H +I + L+ + V LK +D
Sbjct: 272 AIPADASNVEEA-------------HAFINYLLRPEVIAAVSDYVGYANPNLKAGELMDQ 318
Query: 166 KL---IAGVPPAEILAR 179
++ + PP E+L R
Sbjct: 319 EVREDASVYPPQEVLDR 335
>gi|154246279|ref|YP_001417237.1| extracellular solute-binding protein [Xanthobacter autotrophicus
Py2]
gi|154160364|gb|ABS67580.1| extracellular solute-binding protein family 1 [Xanthobacter
autotrophicus Py2]
Length = 368
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS-----------NVAVVVPKSGASL 101
++ FD + Y+ GD+ +AVGWS DV A R + NVA V+PK GA +
Sbjct: 214 IKKFDSSGYINALARGDICLAVGWSGDVFQAKTRAAEAAKKTKKPPVNVAYVIPKQGALM 273
Query: 102 WADLWAIPAASR 113
W D +AIP ++
Sbjct: 274 WFDNFAIPKDAK 285
>gi|398954989|ref|ZP_10676221.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398151733|gb|EJM40272.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 365
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 6 FKDWKDLWLPELAGRISM-VNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D +P + + + NS E +A A +AV+ V F+ + Y+
Sbjct: 175 FLDSADEMMPTVLNYMGLNANSTNEEDYKKATAKLLAVRP-------YVTYFNSSKYITD 227
Query: 65 FGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAAS 112
GD+ +AVG+S D+ A K+ N+A +PK G +LW D+ AIP S
Sbjct: 228 LANGDICVAVGFSGDIFQARNRAQEAKKGINIAYAIPKEGGALWFDMLAIPKDS 281
>gi|158321557|ref|YP_001514064.1| extracellular solute-binding protein [Alkaliphilus oremlandii
OhILAs]
gi|158141756|gb|ABW20068.1| extracellular solute-binding protein family 1 [Alkaliphilus
oremlandii OhILAs]
Length = 348
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 33/195 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ----QNLALLGNQV---------RL 55
W+ LW + AG+I M++S R+ IG +V + L L ++ +
Sbjct: 152 WELLWDEKYAGQILMMDSQRDSIGITLKKLGFSVNSRDSKELELAKQELIRQKPLVMAYV 211
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR-- 113
D + + G+ IA+ WS D + + + +A VVPK G++LW D IP +++
Sbjct: 212 VDEVKDMMIG--GEAAIAIAWSGDAMLMMGQNEKLAYVVPKEGSNLWFDNMVIPKSAKNK 269
Query: 114 -LETKQIGGRVRGPFPLIH-QWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGV 171
L K I R L + ++IE+ + P ++L +E L P
Sbjct: 270 ELAEKFINFMTRPEISLKNVEYIEY------STPNTGTMELLDEELLNNP-------VAY 316
Query: 172 PPAEILARCE-FLEP 185
P +I+ CE FL+P
Sbjct: 317 PSDDIVDNCEVFLDP 331
>gi|251794433|ref|YP_003009164.1| extracellular solute-binding protein [Paenibacillus sp. JDR-2]
gi|247542059|gb|ACS99077.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
JDR-2]
Length = 356
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 52/219 (23%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIA-VQQNL- 46
F W DLW P L +I +++ REVIG QAA +++ + N+
Sbjct: 154 FHSWNDLWDPSLKNQILLLDGAREVIGMGLNSLHYSLNDTNEEHLQAAKAKLSTLTPNVK 213
Query: 47 ALLGNQVRLFDRTHYLKVFGIGDVWIAVG--WSSDVLPAVKRMSNVAVVVPKSGASLWAD 104
A++G++++L + + AVG WS D + + VVP+ G++LW D
Sbjct: 214 AIVGDEIKLL----------LANEEAAVGLVWSGDASEIMSENEKLDYVVPEEGSNLWFD 263
Query: 105 LWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLK 158
IP + K I G H++I F L Q A + ++T E L
Sbjct: 264 NMVIPKTA----KNIEGA--------HKFINFMLDPEHAAQNAEYVGYSTPNAKALEYLP 311
Query: 159 GKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
+ S D + P E+ + E + L + L Y L
Sbjct: 312 EEISGDKRF---YPDKELTEKLEVYKNLGKKMLVHYNEL 347
>gi|375265483|ref|YP_005022926.1| spermidine/putrescine transport system substrate-binding protein
[Vibrio sp. EJY3]
gi|369840804|gb|AEX21948.1| spermidine/putrescine transport system substrate-binding protein
[Vibrio sp. EJY3]
Length = 343
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 36/205 (17%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWADLWKPELEGQVMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V LF+ + + G+V + + W+ A N+ +V PK G W D +AI + +
Sbjct: 205 VLLFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGLNLKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK E K L
Sbjct: 265 K------------NVEAAHKMIDFLLRPEIAEQISRDTGYLTAVKASNEKFKDVAPL--- 309
Query: 167 LIAGVPPAEILARCEFLEPLSEATL 191
P E L R E+ + + + T+
Sbjct: 310 ----FPSQEDLDRVEWQDSVGDLTV 330
>gi|398887585|ref|ZP_10642244.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398192053|gb|EJM79222.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 365
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 6 FKDWKDLWLPELAGRISM-VNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D +P + + + NS E +A A +AV+ V F+ + Y+
Sbjct: 175 FLDSADEMMPTVLNYMGLNANSTNEEDYKKATAKLLAVRP-------YVTYFNSSKYITD 227
Query: 65 FGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAAS 112
GD+ +AVG+S D+ A K+ N+A +PK G +LW D+ AIP S
Sbjct: 228 LANGDICVAVGFSGDIFQARNRAKEAKKGINIAYAIPKEGGALWFDMLAIPKDS 281
>gi|383777608|ref|YP_005462174.1| putative ABC transporter substrate-binding protein [Actinoplanes
missouriensis 431]
gi|381370840|dbj|BAL87658.1| putative ABC transporter substrate-binding protein [Actinoplanes
missouriensis 431]
Length = 416
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 22/117 (18%)
Query: 11 DLWLPELAGRISMVNSPREVI-----------------GTQAAAGRIAVQQNLALLGNQV 53
DLW P G++ M++ E+ G + A ++ Q++ + V
Sbjct: 203 DLWDPAFKGKVGMMSDLTELANFGMLAAGVKPGESDEAGWKKGAAKLKQQKDAGI----V 258
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLWAIP 109
R + Y+ G G+VWI WS D+ + +N+ V+P+ G ++W D +AIP
Sbjct: 259 RQYYEQDYVDALGNGEVWITQAWSGDIFQKNLSDGTNLKFVIPEEGGTIWTDNFAIP 315
>gi|320354601|ref|YP_004195940.1| family 1 extracellular solute-binding protein [Desulfobulbus
propionicus DSM 2032]
gi|320123103|gb|ADW18649.1| extracellular solute-binding protein family 1 [Desulfobulbus
propionicus DSM 2032]
Length = 367
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 24/203 (11%)
Query: 7 KDWKDLWLPELAGRISMVNSPREV-----------IGTQAAAGRIAVQQNLALLGNQVR- 54
+ W DLW P L G+++M RE+ + ++ + A + L L QVR
Sbjct: 158 RRWSDLWQPRLQGKVAMRAQSRELLGLTLLSLGYSLNSEKPSEIDAAVERLIALKPQVRW 217
Query: 55 -LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS- 112
D + G + +GW D A VA ++P+ G +LW+D + IPA+S
Sbjct: 218 VEVDTPKAVAKLLDGSAPVLLGWPMDYQVAHAANPAVAYILPEEGTALWSDNYVIPASSP 277
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVP 172
+ T ++ L+ I + R+ P L +L+K + D + P
Sbjct: 278 NVYTAEVFINF-----LLRPEISAQIVNERSYPTANEAAL--DLIKPEVRNDPVIF---P 327
Query: 173 PAEILARCEFLEPLSEATLSDYE 195
PAE L R F PLS + Y+
Sbjct: 328 PAEALRRAHFYRPLSREGETLYQ 350
>gi|326797025|ref|YP_004314845.1| extracellular solute-binding protein [Marinomonas mediterranea
MMB-1]
gi|326547789|gb|ADZ93009.1| extracellular solute-binding protein family 1 [Marinomonas
mediterranea MMB-1]
Length = 373
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
VR F + Y+ G++ +A+GWS DV+ A R S N+ +PK G +W D+
Sbjct: 224 VRQFHSSQYISALANGEICVAIGWSGDVIQAQDRASEAENGVNIEYSIPKEGTQIWFDML 283
Query: 107 AIPAASR 113
AIP ++
Sbjct: 284 AIPKGAK 290
>gi|345429988|ref|YP_004823108.1| hypothetical protein PARA_14210 [Haemophilus parainfluenzae T3T1]
gi|301156051|emb|CBW15522.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 360
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 77/198 (38%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREV-------IGTQAAAGRIAV----QQNLALLGNQVR 54
F W D W PE A +I +++ REV IG A+ + L L V
Sbjct: 160 FTSWGDFWKPEYANKIQLLDDAREVFNIALLKIGQDPNTKDPAIIKQAYEELLKLRPNVL 219
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S
Sbjct: 220 SFNSDNPANSFISGEVELGQLWNGSVRIAKKEQAPLNMVFPKEGPVLWVDTLAIPKTS-- 277
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG---V 171
K G H+ I + L A + P L+ K L ++
Sbjct: 278 --KNPDG--------AHKLINYLLGAKAAEKLTLAIGYPTANLEAKKVLPKEITEDPSIY 327
Query: 172 PPAEILARCEFLEPLSEA 189
P AEIL + + + + +A
Sbjct: 328 PTAEILQKSHWQDDVGDA 345
>gi|398973895|ref|ZP_10684687.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
gi|398142322|gb|EJM31222.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
Length = 362
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 13/137 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK GA+LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGANLWFDLL 272
Query: 107 AIPAASRLETKQIGGRVRGPF-PLIHQWIEFCLQTARALPFNTRVKLPE-----ELLKGK 160
AIPA + TK+ + P + + + A P + PE E+ +
Sbjct: 273 AIPADAG-NTKEAHAFINYLLDPQVIAKVSASVGYANPNPAAKQYMDPELVNNPEVYPSQ 331
Query: 161 PSLDTKLIAGVPPAEIL 177
LD I+ PP I+
Sbjct: 332 EVLDKLYISSTPPQSIM 348
>gi|350270463|ref|YP_004881771.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Oscillibacter valericigenes Sjm18-20]
gi|348595305|dbj|BAK99265.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Oscillibacter valericigenes Sjm18-20]
Length = 357
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 30/215 (13%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIG--------TQAAAGRIAVQQNLALLGNQ 52
M + W L+ P+ AG++ M+N+ R+ IG + + + + + LL Q
Sbjct: 151 MVDEAITSWDALFDPKYAGQVLMINNSRDAIGVALKDLGYSYNTTDQAQITEAVNLLIQQ 210
Query: 53 -----VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 107
V+ + G+ I V ++ D L ++ VVP G++++ D
Sbjct: 211 KKDGIVQAYVMDEIFDKLEGGEAAIGVYYAGDYLTMHDNNPDLTFVVPSEGSNIFTDAMC 270
Query: 108 IPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKL 167
IPA + Q G ++I F T + + L+ K +LD +
Sbjct: 271 IPAGA---ANQENGE---------KFINFMCSTEVGVANCEAIGYSTPLMSVKDALDPAI 318
Query: 168 IAG---VPPAEILARCEFLEPLSEATLS--DYEWL 197
+ P +LA CE L +ATL D EWL
Sbjct: 319 TSNPVAYPSDAVLASCEPFLNLPDATLKFYDSEWL 353
>gi|374703156|ref|ZP_09710026.1| extracellular solute-binding protein [Pseudomonas sp. S9]
Length = 365
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 21/136 (15%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + ++ G++ +A G+S DVL A R ++A +PK G +LW D+
Sbjct: 216 VTYFHSSKFISDLANGNICVAAGFSGDVLQAADRAEEAGKGIDIAYAIPKEGGNLWFDMM 275
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTK 166
AIPA S+ KQ H +I + LQ + V LK +D +
Sbjct: 276 AIPADSK-NVKQ-----------AHAFINYLLQPEVIAGVSDYVGYANPNLKSAKFMDQE 323
Query: 167 LIAG---VPPAEILAR 179
+ PP E+L R
Sbjct: 324 VSTNPSVYPPQEVLDR 339
>gi|319775579|ref|YP_004138067.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae F3047]
gi|329122378|ref|ZP_08250965.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus aegyptius ATCC
11116]
gi|317450170|emb|CBY86384.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae F3047]
gi|327473660|gb|EGF19079.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus aegyptius ATCC
11116]
Length = 350
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 34/189 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A K ++ V PK GA W D +AIP +++
Sbjct: 213 NSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAIPNSAQ--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G H++I+F L+ A + F+ + LL + + D KL
Sbjct: 270 -----NVEGA----HKFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSTEVANDPKLF-- 318
Query: 171 VPPAEILAR 179
PPAE + +
Sbjct: 319 -PPAEEVEK 326
>gi|387770608|ref|ZP_10126787.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Pasteurella
bettyae CCUG 2042]
gi|386903974|gb|EIJ68773.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Pasteurella
bettyae CCUG 2042]
Length = 363
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 79/200 (39%), Gaps = 29/200 (14%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQV 53
F W DLW PE A ++ +++ REV T A + A ++ L L N V
Sbjct: 162 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKLGKNPNTTDPAEIKAAYEELLKLRPN-V 220
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM-SNVAVVVPKSGASLWADLWAIPAAS 112
F+ + F G+V + W+ V A K + +V PK G LW D AIP S
Sbjct: 221 LSFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQPGTINMVFPKEGPVLWVDTLAIPKTS 280
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGK---PSLDTKLIA 169
K G H+ I + L A + P L+ K P T+ A
Sbjct: 281 ----KNPDG--------AHKLINYMLGAKAAEKLTLAIGYPTANLEAKKVLPKEITEDPA 328
Query: 170 GVPPAEILARCEFLEPLSEA 189
P AE+L + + + +A
Sbjct: 329 IYPTAEVLKSANWQDDVGDA 348
>gi|443316510|ref|ZP_21045951.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
gi|442783874|gb|ELR93773.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
Length = 382
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 41/213 (19%)
Query: 7 KDWKDLWLPE--LAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLK- 63
+DW LW + LA +I++++ RE +G A + N ++R +K
Sbjct: 182 EDWDYLWENQSSLARQITLLDDVRETMG--ATLKSLGYSYNSTDPAEIEEAYERLVEIKP 239
Query: 64 -------------VFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
+FG GD+ + + +S D + A + +VP SG+S+W D IP
Sbjct: 240 ALASFMSFGYEDALFG-GDLTVVMAYSVDAISATIEDDRMEYIVPASGSSVWTDTMVIPT 298
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVKLPEELLKGKPSLD 164
++ ++W+ F L+ +L F T + +LL + +
Sbjct: 299 SAP------------NVDAAYEWMNFMLEPEVSTSAVESLFFATPNAVSLDLLSDEVRNN 346
Query: 165 TKLIAGVPPAEILARCEFLEPLSEAT-LSDYEW 196
L P E+LARCE + P+ +AT L D W
Sbjct: 347 EDLF---PSDEVLARCEGIAPIGDATDLYDEYW 376
>gi|427419359|ref|ZP_18909542.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
gi|425762072|gb|EKV02925.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
Length = 381
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 51/217 (23%)
Query: 8 DWKDLWLPE--LAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLK-- 63
DW LW L+ +++M++ RE +G A + N + + LK
Sbjct: 182 DWDYLWDNSDVLSRKMTMLDDVRETMG--AVLSSLGYSYNATDPAQLEEAYQKLLELKPS 239
Query: 64 -----VFG------IGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
FG GD+ +++ +S + +P N V+P+SG+S+W D IPA++
Sbjct: 240 LASFKSFGWQDELLSGDLLLSMVYSVEGIPVSLENPNFKYVIPESGSSVWTDTMVIPASA 299
Query: 113 -RLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNT-----RVKLPEELLKGK 160
+E ++WI F LQ T L F T L +ELL K
Sbjct: 300 PNVEAA-------------YEWINFNLQPQVSKDTVERLFFATPNGEAMTMLSQELLDNK 346
Query: 161 PSLDTKLIAGVPPAEILARCEFLEPLSEAT-LSDYEW 196
PP +ILA+CE + P+ EA L D W
Sbjct: 347 NLF--------PPEDILAKCEGIAPVGEANALYDEYW 375
>gi|383190431|ref|YP_005200559.1| spermidine/putrescine-binding periplasmic protein [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
gi|371588689|gb|AEX52419.1| spermidine/putrescine-binding periplasmic protein [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
Length = 369
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T +A+ A L L +R F + Y+ G
Sbjct: 176 VSFLDAPAEIYATVLNYLHLDPNSTKASDYTGAANDLLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV+ A R NVA +PK GA + D++AIPA ++
Sbjct: 236 DICVAIGWAGDVMQAANRAKEAKNGVNVAYSIPKEGALAFFDVFAIPADAK 286
>gi|145640471|ref|ZP_01796055.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae R3021]
gi|145275057|gb|EDK14919.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae 22.4-21]
Length = 350
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 34/189 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A K ++ V PK GA W D +AIP +++
Sbjct: 213 NSDSPEVPYVQGEVAIGMIWNGSAYLAQKENPSLQFVYPKEGAIFWMDNYAIPNSAQ--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G H++I+F L+ A + F+ + LL + + D KL
Sbjct: 270 -----NVEG----AHKFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSAEVANDPKLF-- 318
Query: 171 VPPAEILAR 179
PPAE + +
Sbjct: 319 -PPAEEVEK 326
>gi|145637462|ref|ZP_01793121.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae PittHH]
gi|145269408|gb|EDK09352.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae PittHH]
Length = 350
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 34/189 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A K ++ V PK GA W D +AIP +++
Sbjct: 213 NSDSPEVPYVQGEVAIGMIWNGSAYLAQKENPSLQFVYPKEGAIFWMDNYAIPNSAQ--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G H++I+F L+ A + F+ + LL + + D KL
Sbjct: 270 -----NVEG----AHKFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSAEVANDPKLF-- 318
Query: 171 VPPAEILAR 179
PPAE + +
Sbjct: 319 -PPAEEVEK 326
>gi|358457960|ref|ZP_09168174.1| extracellular solute-binding protein family 1 [Frankia sp. CN3]
gi|357078747|gb|EHI88192.1| extracellular solute-binding protein family 1 [Frankia sp. CN3]
Length = 438
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 13/114 (11%)
Query: 9 WKDLWLPELAGRISMVNSPREV-------IGTQAAAG------RIAVQQNLALLGNQVRL 55
++DL+ P+ AG + M ++ IG + A + N VR
Sbjct: 239 YEDLFDPKFAGHVGMFGDNLDLPNLALVGIGVNPEKSTPDDWKKAAEKLNKQRTDGIVRK 298
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
+ Y+ GD+WI++ WS DV V N+ VVPK G LW D IP
Sbjct: 299 YYTQDYIDALASGDLWISMAWSGDVYQQVAEGKNLRFVVPKEGGILWTDNLCIP 352
>gi|414160396|ref|ZP_11416664.1| hypothetical protein HMPREF9310_01038 [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410878294|gb|EKS26179.1| hypothetical protein HMPREF9310_01038 [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 357
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 87/222 (39%), Gaps = 42/222 (18%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIG----------TQAAAGRI-AVQQNLALLGN 51
+ F W+ L+ P+ I +V+ REV+G + R+ + +LA L
Sbjct: 152 HDDFSSWRSLYNPKFKNDIILVDGAREVMGLSLNKLGYSLNETNPKRLDEAETDLAHLAP 211
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 111
QV+ + + IAV WS P V+ VVPK G++LW D IP
Sbjct: 212 QVKGIVGDEVTMMLEQHEANIAVVWSGTAAPIVQENPEFDYVVPKEGSNLWFDTMVIPKT 271
Query: 112 SRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNT-----RVKLPEELLKGK 160
++ Q G +Q+I F L Q + + T + +LP+E+
Sbjct: 272 AQ---NQAGA---------YQFINFLLDPKNSKQNTEWVGYATPNEAAKKRLPKEIKN-- 317
Query: 161 PSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
D + P E +R E + L + L+DY N +
Sbjct: 318 ---DQRF---YPSKETQSRLEVYKDLGKDILNDYNEHFLNFK 353
>gi|145639063|ref|ZP_01794671.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittII]
gi|145272035|gb|EDK11944.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittII]
Length = 349
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 18/158 (11%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 179 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 238
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP----- 109
F+ + F G+V + W+ V A K + + +V PK G LW D AIP
Sbjct: 239 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLNMVFPKEGPVLWVDTLAIPVTAKN 298
Query: 110 --AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALP 145
A +L +G + L + ++ +ALP
Sbjct: 299 PEGAHKLINYMLGKKTAEKLTLAIGYPTSNIEAKKALP 336
>gi|186686044|ref|YP_001869240.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
gi|186468496|gb|ACC84297.1| extracellular solute-binding protein, family 1 [Nostoc punctiforme
PCC 73102]
Length = 361
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 28/198 (14%)
Query: 7 KDWKDLWLPE--LAGRISMVNSPREVIG--------TQAAAGRIAVQQ---NLALLGNQV 53
+DW LW + L R++++N REV+G + + ++Q L +L +
Sbjct: 161 QDWDYLWQNQEKLNQRMTLLNDVREVMGATLRMLGYSYNSKNEQEIKQAYEKLKVLKPAI 220
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
FD + GD+ +A+ +S+D + + + V+P+SG+SLW D IP +
Sbjct: 221 ARFDTDAWQNQILAGDLLLAMCYSADAVKIAQENPKLKYVIPRSGSSLWTDTIVIPKTA- 279
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKL--IAGV 171
+ G + WI LQ A + R+ + G L + A +
Sbjct: 280 ---PNLAG--------AYAWINMILQPELAAQISQRLSISTPNRAGFEQLPKTIQDNANL 328
Query: 172 PPAE-ILARCEFLEPLSE 188
PAE +LA CE + P+ +
Sbjct: 329 FPAESLLANCERVTPVGD 346
>gi|390452962|ref|ZP_10238490.1| family 1 extracellular solute-binding protein [Paenibacillus
peoriae KCTC 3763]
Length = 357
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 50/218 (22%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQAAA--------GRIAVQQNL----------- 46
F W LW P+L + +V+ RE++G + + +QQ L
Sbjct: 155 FHSWDGLWNPKLRNNLLLVDGAREIMGMSLNSLHYSLNDTNKAHLQQALTKLEKLAPNVK 214
Query: 47 ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 106
A++G+++++ + + V WS D + + + +VP G++LW D
Sbjct: 215 AVVGDEIKM--------LLANEEAAAGVVWSGDASEIMDQNDKLDYIVPDEGSNLWFDNM 266
Query: 107 AIP-AASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKG 159
IP A+ +E H++I F + Q A + ++T K ++LL
Sbjct: 267 VIPKTATHVEAA-------------HKFINFMMQPDVAAQNAEFVGYSTPNKDGKKLLPA 313
Query: 160 KPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
S D + PP+EI + E + L + L+ Y L
Sbjct: 314 DISGDERF---YPPSEITDKLEVYDNLGKRMLAHYNEL 348
>gi|343518390|ref|ZP_08755382.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
pittmaniae HK 85]
gi|343393678|gb|EGV06231.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
pittmaniae HK 85]
Length = 350
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 9 WKDLWLPELAGRISMVNSPREVI------------GTQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ + + REV T+ A + A ++ L LL N V F
Sbjct: 153 WGDLWNPEYKGKVLLTSDSREVFHIALLLDGKSPNSTEEADIKAAYERLLKLLPN-VATF 211
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ F G+V + + W+ K N+ V PK GA W D +AIP +R
Sbjct: 212 NSDSPELPFVQGEVALGMLWNGSAYMGHKENPNLQFVYPKEGAIFWMDNYAIPKNAR 268
>gi|157375531|ref|YP_001474131.1| spermidine/putrescine-binding periplasmic protein [Shewanella
sediminis HAW-EB3]
gi|157317905|gb|ABV37003.1| spermidine/putrescine-binding periplasmic protein [Shewanella
sediminis HAW-EB3]
Length = 358
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 34/199 (17%)
Query: 9 WKDLW--LPELAGRISMVNSPREVIGT------QAAAGRIAVQQNLA--LLGNQVRLFDR 58
WK L+ P+L G++ M++ PR++IG +A +++Q N +L +Q + +
Sbjct: 158 WKQLYSPAPDLKGKLGMIDEPRDLIGMGLKSLGYSANSEVSLQLNEVEEVLQSQKAMVNS 217
Query: 59 THYLKV-----FGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
Y+ + G++ ++ ++ D L + N+ V+P+ G ++W D
Sbjct: 218 YIYMTLDEHSPIVTGEILASMIYNGDALMVKEHSENLTFVLPEEGGAIWVDYLT------ 271
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV-----KLPEELLKGKPSLDTKLI 168
IG + + P L + ++ F Q A V L E L L+ K+I
Sbjct: 272 -----IGAKAKEP-DLAYAFLNFINQAEHAAQLAQYVYYATPNLAAEKLLPDEFLNDKVI 325
Query: 169 AGVPPAEILARCEFLEPLS 187
P A+ L EF +PLS
Sbjct: 326 --YPDADSLKNSEFYKPLS 342
>gi|315658585|ref|ZP_07911456.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus lugdunensis
M23590]
gi|315496374|gb|EFU84698.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus lugdunensis
M23590]
Length = 357
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 83/215 (38%), Gaps = 34/215 (15%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQV 53
F W DL+ + +V+ RE+IG T + R A +Q+L LG QV
Sbjct: 155 FNHWSDLYQERYRNDVLLVDGAREIIGLSLNKLGYSLNDTNSQHIRQA-EQDLKKLGPQV 213
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
R + + IAV WS P V+ VVPK G++LW D IP R
Sbjct: 214 RGVVGDEVTMMLQQNEGNIAVVWSGVAAPLVQGSDKYNYVVPKEGSNLWFDNMVIP---R 270
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKL 167
+ G +Q+I F L + + + T K +LL + D +
Sbjct: 271 TAQNKEGA---------YQFINFLLDAENSKKNTEWVGYATPNKAARQLLPNEIRNDHRF 321
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P + AR E + L + TL +Y N +
Sbjct: 322 ---YPTQQEQARLEVYKDLGQRTLGNYNESFLNFK 353
>gi|376262419|ref|YP_005149139.1| spermidine/putrescine-binding periplasmic protein [Clostridium sp.
BNL1100]
gi|373946413|gb|AEY67334.1| spermidine/putrescine-binding periplasmic protein [Clostridium sp.
BNL1100]
Length = 349
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 43/209 (20%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQNL--ALL 49
W LW + +I M++S R+ IG + A + Q+++ A +
Sbjct: 153 WNILWDKKYDKQIFMLDSQRDSIGVTLKKLGYSLNTKNKEELEKAKNELIKQKDIVQAYV 212
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G++V+ D+ +G+ +AV WS D + + ++ +PK G++LW D IP
Sbjct: 213 GDEVK--DK------MIMGEGALAVVWSGDAVYMKSQNKDLEYAIPKEGSNLWFDSMVIP 264
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLD---TK 166
+ ++ + + ++I F T AL + + K LD K
Sbjct: 265 STAKHQKEA------------EEFINFMCDTEIALENTNYIGYSTPQTEAKKKLDPVLLK 312
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYE 195
IA P E + CE L +A++ DY+
Sbjct: 313 DIAAYPTDEQMKDCEVFIDL-DASIKDYD 340
>gi|421615517|ref|ZP_16056541.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
gi|409782590|gb|EKN62145.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
Length = 361
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 39/197 (19%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
W ++ PE A + I+ ++S E+I ++ AA ++ L +
Sbjct: 152 WAVIFEPENAAKLASCGIAFLDSADEMIPAMLNYLGLDPNSENAADYRKAEEKLLAVRPH 211
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
VR F + Y+ G++ +A G+S DV A R +A +PK G +LW D+
Sbjct: 212 VRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGVEIAYAIPKEGGNLWFDML 271
Query: 107 AIPA-ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
AIPA AS ++ H +I + L+ + V LK +D
Sbjct: 272 AIPADASNVDEA-------------HAFINYLLRPEVIAAVSDYVGYANPNLKASELMDQ 318
Query: 166 KL---IAGVPPAEILAR 179
++ + PP E+L R
Sbjct: 319 EVRQDASVYPPQEVLDR 335
>gi|398873539|ref|ZP_10628794.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398199204|gb|EJM86149.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 362
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 35/148 (23%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK GA+LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLL 272
Query: 107 AIPAASR-----------LETKQIGGRVR------GPFPLIHQWIEFCLQTARALPFNTR 149
AIPA + L Q+ +V P P Q+++ L + N
Sbjct: 273 AIPADASNPKEAHAFINYLLDPQVIAKVSASVGYANPNPAAKQYMDPELVS------NPE 326
Query: 150 VKLPEELLKGKPSLDTKLIAGVPPAEIL 177
V P+E+ LD I+ PP I+
Sbjct: 327 VYPPQEV------LDKLYISTTPPQSIM 348
>gi|444378665|ref|ZP_21177859.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterovibrio sp. AK16]
gi|443677211|gb|ELT83898.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterovibrio sp. AK16]
Length = 347
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 72/195 (36%), Gaps = 26/195 (13%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQVRLFD 57
W DLW E AG+I +++ R+V G A ++ + L L V +++
Sbjct: 152 WADLWNDEFAGQIMLLDDVRDVFGMALKAKGYSINTTNEDEIKEAYEMLKDLRPNVVVYN 211
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
F G+V I W+ + A M N+ V P G+ LW D + IP +
Sbjct: 212 SDAPHVPFVTGEVGIGQQWNGNAYLAQAEMENIEFVYPDEGSILWMDNFIIPKGAE---- 267
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG---VPPA 174
L H++I+F + + P + K L + P
Sbjct: 268 --------KIDLAHKFIDFLYRPENQAAMVEELGYPAPSKRAKEKLSAEYTENNVIFPSD 319
Query: 175 EILARCEFLEPLSEA 189
E + + EF + EA
Sbjct: 320 EDVEKGEFTNDVGEA 334
>gi|426409667|ref|YP_007029766.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. UW4]
gi|426267884|gb|AFY19961.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. UW4]
Length = 362
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 21/136 (15%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK GA+LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLL 272
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTK 166
AIPA + + H +I + L + V K +D +
Sbjct: 273 AIPADASNPKEA------------HAFINYLLDPQVIAKVSASVGYANPNPAAKQYMDPE 320
Query: 167 LIAG---VPPAEILAR 179
L++ PP E+L +
Sbjct: 321 LVSNPEVYPPQEVLDK 336
>gi|398952723|ref|ZP_10674961.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398154781|gb|EJM43245.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 362
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 35/148 (23%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK GA+LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLL 272
Query: 107 AIPAASR-----------LETKQIGGRVR------GPFPLIHQWIEFCLQTARALPFNTR 149
AIPA + L Q+ +V P P Q+++ L + N
Sbjct: 273 AIPADASNPKEAHAFINYLLDPQVIAKVSASVGYANPNPAAKQYMDPELVS------NPE 326
Query: 150 VKLPEELLKGKPSLDTKLIAGVPPAEIL 177
V P+E+ LD I+ PP I+
Sbjct: 327 VYPPQEV------LDKLYISTTPPQSIM 348
>gi|15602125|ref|NP_245197.1| protein PotD [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720489|gb|AAK02344.1| PotD [Pasteurella multocida subsp. multocida str. Pm70]
Length = 348
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F+ W DLW E G++ M++ PRE+ TQ A + L L +
Sbjct: 148 FQSWGDLWNAEFKGKVQMLDDPRELFNIALLKMGKDPNTQDPAVLKEAYEELLKLRPNIL 207
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F+ + F G+ I + W+ + A + V ++ PK G LW D AIP+ ++
Sbjct: 208 SFNSDNPASTFISGETDIGLLWNGSIRIAKNEGATVEMIYPKEGTMLWIDNLAIPSNAK 266
>gi|378774665|ref|YP_005176908.1| spermidine/putrescine-binding periplasmic protein PotD2
[Pasteurella multocida 36950]
gi|356597213|gb|AET15939.1| spermidine/putrescine-binding periplasmic protein PotD2
[Pasteurella multocida 36950]
Length = 348
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F+ W DLW E G++ M++ PRE+ TQ A + L L +
Sbjct: 148 FQSWGDLWNAEFKGKVQMLDDPRELFNIALLKMGKDPNTQDPAVLKEAYEELLKLRPNIL 207
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F+ + F G+ I + W+ + A + V ++ PK G LW D AIP+ ++
Sbjct: 208 SFNSDNPASTFISGETDIGLLWNGSIRIAKNEGATVEMIYPKEGTMLWIDNLAIPSNAK 266
>gi|406914562|gb|EKD53729.1| hypothetical protein ACD_60C00159G0009 [uncultured bacterium]
Length = 343
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 26/206 (12%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-----------LALLGNQ 52
N W DLW + ++ +++ REV + ++ + L L
Sbjct: 140 NSITKWSDLWDKKYENQLMLLDDSREVFSIALKSLGYSINDSDPEHIKKAYLKLRELLPN 199
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
++LF + + D + + W+ D+ A K N+A ++PK G LW D +AIP
Sbjct: 200 IKLFKSDGVITILIDEDANVGMAWNGDLYKAKKENDNLAFILPKDGFVLWIDNFAIP--- 256
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG-- 170
K R ++++ F L+ A + P L + SL + A
Sbjct: 257 ----KNAPHRENA-----YKFLNFMLRADVAKAVSLSNNFPTPNLAAQKSLPEDIRANPI 307
Query: 171 -VPPAEILARCEFLEPLSEATLSDYE 195
P E L R E ++++ L YE
Sbjct: 308 IYPSKETLRRGEIERDVNDSALELYE 333
>gi|383310636|ref|YP_005363446.1| spermidine/putrescine-binding periplasmic protein PotD2
[Pasteurella multocida subsp. multocida str. HN06]
gi|386834629|ref|YP_006239946.1| bacterial extracellular solute-binding protein, putative
[Pasteurella multocida subsp. multocida str. 3480]
gi|417854586|ref|ZP_12499873.1| PotD [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|421262975|ref|ZP_15714060.1| PotD [Pasteurella multocida subsp. multocida str. P52VAC]
gi|425065035|ref|ZP_18468155.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida P1059]
gi|338217661|gb|EGP03507.1| PotD [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|380871908|gb|AFF24275.1| spermidine/putrescine-binding periplasmic protein PotD2
[Pasteurella multocida subsp. multocida str. HN06]
gi|385201332|gb|AFI46187.1| bacterial extracellular solute-binding protein, putative
[Pasteurella multocida subsp. multocida str. 3480]
gi|401690388|gb|EJS85669.1| PotD [Pasteurella multocida subsp. multocida str. P52VAC]
gi|404384489|gb|EJZ80923.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida P1059]
Length = 348
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F+ W DLW E G++ M++ PRE+ TQ A + L L +
Sbjct: 148 FQSWGDLWNAEFKGKVQMLDDPRELFNIALLKMGKDPNTQDPAVLKEAYEELLKLRPNIL 207
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F+ + F G+ I + W+ + A + V ++ PK G LW D AIP+ ++
Sbjct: 208 SFNSDNPASTFISGETDIGLLWNGSIRIAKNEGATVEMIYPKEGTMLWIDNLAIPSNAK 266
>gi|77459054|ref|YP_348560.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77383057|gb|ABA74570.1| putrescine ABC transporter, substrate-binding protein [Pseudomonas
fluorescens Pf0-1]
Length = 362
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 13/137 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK GA+LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFRAANRAKEAKNGVNIAYSIPKEGANLWFDLL 272
Query: 107 AIPAASRLETKQIGGRVRGPF-PLIHQWIEFCLQTARALPFNTRVKLPE-----ELLKGK 160
AIPA + TK+ + P + + + A P + PE E+ +
Sbjct: 273 AIPADAG-NTKEAHAFINYLLDPQVIAKVSASVGYANPNPAAKQYMDPELVNNPEVYPSQ 331
Query: 161 PSLDTKLIAGVPPAEIL 177
LD I+ PP I+
Sbjct: 332 EVLDKLYISSTPPQSIM 348
>gi|30249825|ref|NP_841895.1| solute-binding family 1 protein [Nitrosomonas europaea ATCC 19718]
gi|30180862|emb|CAD85784.1| Bacterial extracellular solute-binding protein, family 1
[Nitrosomonas europaea ATCC 19718]
Length = 369
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 13 WLPELAGRISMVNSPREVI-------GTQAAAGRIAVQQNLALLGNQVR----LFDRTHY 61
+L ++ GR+++++S RE++ G A A Q L + + F+ T Y
Sbjct: 170 YLKKIKGRVTVLDSQRELLAAALKYLGYSAHDTDEAHWQQAKTLIIRAKPYWAAFNNTSY 229
Query: 62 LKVFGIGDVWIAVGWSSDVLPAVK------RMSNVAVVVPKSGASLWADLWAIPAASRLE 115
++ +G++W+A G+S+D+ A + R ++ V+PK GA L D + +
Sbjct: 230 IRELAVGNLWVAHGYSNDMFQAAQDAKKTGRQFSIDFVIPKEGAVLSLDSMVLHRS---- 285
Query: 116 TKQIGGRVRGPFP-LIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG---V 171
G P L H++I F L+ + L +P + ++IA
Sbjct: 286 ---------GHRPDLAHRFINFMLEGENSAELTNLTGSGNPNLDARPHIHPEIIANPAIF 336
Query: 172 PPAEILARCEFLEPLSEA 189
P A +R E LE ++
Sbjct: 337 PDAAQFSRLEMLEDINHT 354
>gi|289551086|ref|YP_003471990.1| spermidine/putrescine ABC transporter substrate-binding protein
[Staphylococcus lugdunensis HKU09-01]
gi|385784705|ref|YP_005760878.1| ABC transporter extracellular binding protein [Staphylococcus
lugdunensis N920143]
gi|418414380|ref|ZP_12987595.1| hypothetical protein HMPREF9308_00760 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|418637440|ref|ZP_13199762.1| ABC transporter, solute-binding protein [Staphylococcus lugdunensis
VCU139]
gi|289180618|gb|ADC87863.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Staphylococcus lugdunensis HKU09-01]
gi|339894961|emb|CCB54266.1| ABC transporter extracellular binding protein [Staphylococcus
lugdunensis N920143]
gi|374839067|gb|EHS02593.1| ABC transporter, solute-binding protein [Staphylococcus lugdunensis
VCU139]
gi|410876987|gb|EKS24884.1| hypothetical protein HMPREF9308_00760 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 357
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 83/215 (38%), Gaps = 34/215 (15%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQV 53
F W DL+ + +V+ RE+IG T + R A +Q+L LG QV
Sbjct: 155 FNHWSDLYQERYRNDVLLVDGAREIIGLSLNKLGYSLNDTNSQHLRQA-EQDLKKLGPQV 213
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
R + + IAV WS P V+ VVPK G++LW D IP R
Sbjct: 214 RGVVGDEVTMMLQQNEGNIAVVWSGVAAPLVQGSDKYNYVVPKEGSNLWFDNMVIP---R 270
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKL 167
+ G +Q+I F L + + + T K +LL + D +
Sbjct: 271 TAQNKEGA---------YQFINFLLDAENSKKNTEWVGYATPNKAARQLLPNEIRNDHRF 321
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P + AR E + L + TL +Y N +
Sbjct: 322 ---YPTQQEQARLEVYKDLGQRTLGNYNESFLNFK 353
>gi|261253386|ref|ZP_05945959.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|417953143|ref|ZP_12596191.1| extracellular solute-binding protein family 1 [Vibrio orientalis
CIP 102891 = ATCC 33934]
gi|260936777|gb|EEX92766.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|342817675|gb|EGU52552.1| extracellular solute-binding protein family 1 [Vibrio orientalis
CIP 102891 = ATCC 33934]
Length = 369
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 43 QQNLALLGNQVR----LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAV 92
Q LALL QVR F + Y+ GD+ +A+GWS DVL A R + +A
Sbjct: 208 QDALALL-KQVRPYVTYFHSSQYINDLANGDICVAIGWSGDVLQAADRAAEADNGVEIAY 266
Query: 93 VVPKSGASLWADLWAIPAASR 113
+PK GA W DL AIP ++
Sbjct: 267 SIPKEGALAWFDLMAIPKEAK 287
>gi|402701746|ref|ZP_10849725.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
fragi A22]
Length = 362
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ IA G+S DV A+ R N+A VVPK G +LW D+
Sbjct: 213 ISYFHSSKYVTDLANGDICIAFGYSGDVYQAIHRAQEAGNGVNIAYVVPKEGGNLWFDML 272
Query: 107 AIPAASR 113
IPA ++
Sbjct: 273 TIPADAK 279
>gi|251792211|ref|YP_003006931.1| PotD [Aggregatibacter aphrophilus NJ8700]
gi|422337917|ref|ZP_16418886.1| spermidine/putrescine-binding periplasmic protein 1
[Aggregatibacter aphrophilus F0387]
gi|247533598|gb|ACS96844.1| PotD [Aggregatibacter aphrophilus NJ8700]
gi|353344923|gb|EHB89223.1| spermidine/putrescine-binding periplasmic protein 1
[Aggregatibacter aphrophilus F0387]
Length = 365
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 74/198 (37%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W D W PE ++ +++ REV TQ A + L L V
Sbjct: 165 FTSWGDFWKPEFTNKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 224
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S+
Sbjct: 225 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTSK- 283
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG---V 171
G H+ I + L A + P L+ K L ++
Sbjct: 284 -------NPEG----AHKLINYLLGAKAAEKLTLAIGYPTANLEAKKVLPKEITEDPSIY 332
Query: 172 PPAEILARCEFLEPLSEA 189
P AE+L + + + +A
Sbjct: 333 PTAEVLKNSHWQDDVGDA 350
>gi|416892519|ref|ZP_11923857.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter aphrophilus ATCC 33389]
gi|347814798|gb|EGY31446.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter aphrophilus ATCC 33389]
Length = 365
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 74/198 (37%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W D W PE ++ +++ REV TQ A + L L V
Sbjct: 165 FTSWGDFWKPEFTNKVQLLDDAREVFNIALLKSGQDPNTQDPAIIKQAYEELLKLRPNVL 224
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AIP S+
Sbjct: 225 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTSK- 283
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG---V 171
G H+ I + L A + P L+ K L ++
Sbjct: 284 -------NPEG----AHKLINYLLGAKAAEKLTLAIGYPTANLEAKKVLPKEITEDPSIY 332
Query: 172 PPAEILARCEFLEPLSEA 189
P AE+L + + + +A
Sbjct: 333 PTAEVLKNSHWQDDVGDA 350
>gi|379724354|ref|YP_005316485.1| family 1 extracellular solute-binding protein [Paenibacillus
mucilaginosus 3016]
gi|378573026|gb|AFC33336.1| family 1 extracellular solute-binding protein [Paenibacillus
mucilaginosus 3016]
Length = 358
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 48/217 (22%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGT------------------QAAAGRIAVQQNL- 46
F W DLW +L +I +V+ REV+G +A A + N+
Sbjct: 156 FTSWNDLWDEKLENQILLVDGAREVMGMGLNSLGYSLNDRDEAHLQEAKAKLDTLTPNVK 215
Query: 47 ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 106
A++G+++++ + + + V WS D + + VVP+ G++LW D
Sbjct: 216 AIVGDEIKM--------LLANEEAAVGVVWSGDASEIMDENDKLDYVVPEEGSNLWFDNM 267
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGK 160
IP + + G H +I F L Q A + ++T + E L +
Sbjct: 268 VIPKTAH--------NIEGA----HAFINFMLDPEVAAQNAEYVGYSTPNESAMEFLPEE 315
Query: 161 PSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
S D + P E+ + E E L + LS Y L
Sbjct: 316 ISGDKRF---YPDPELTEKLEVYENLGKRMLSHYNEL 349
>gi|425062947|ref|ZP_18466072.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida X73]
gi|404383653|gb|EJZ80104.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida X73]
Length = 348
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F+ W DLW E G++ M++ PRE+ TQ A + L L +
Sbjct: 148 FQSWGDLWNAEFKGKVQMLDDPRELFNIALLKMGKDPNTQDPAVLKEAYEELLKLRPNIL 207
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F+ + F G+ I + W+ + A + V ++ PK G LW D AIP+ ++
Sbjct: 208 SFNSDNPASAFISGETDIGLLWNGSIRIAKNEGATVEMIYPKEGTMLWIDNLAIPSNAK 266
>gi|373494689|ref|ZP_09585289.1| hypothetical protein HMPREF0380_00927 [Eubacterium infirmum F0142]
gi|371968070|gb|EHO85535.1| hypothetical protein HMPREF0380_00927 [Eubacterium infirmum F0142]
Length = 355
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 32/195 (16%)
Query: 9 WKDLWLPELAGRISMVNSPRE--VIGTQAAAGRIAVQQNLAL------LGNQVRLF---- 56
W DL + +I M +S R+ I +A I ++ L L NQ L
Sbjct: 158 WNDLLNKKYDQQIVMPDSVRDNFAIALKAKGYSINTKKETELKKATEFLQNQRHLVYKYS 217
Query: 57 -DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
D L + G D IAV W+ +VL + + S++ VVPK G+ + D+WAIPA + E
Sbjct: 218 NDAARDLAIGGSTD--IAVVWNGEVLYSREENSDLDFVVPKEGSEEFLDMWAIPANA--E 273
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTR---VKLPEELLKGKPSLDTKLIAGVP 172
K+ +WI+F ++ AL N + +P + + + S DT+ +
Sbjct: 274 HKKNA----------EKWIDFMMRRKTALK-NYKYLTYTIPNKAVIDEVSKDTENEKYIF 322
Query: 173 PAE-ILARCEFLEPL 186
P E I+++CE L L
Sbjct: 323 PDESIISKCESLMDL 337
>gi|315633931|ref|ZP_07889220.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Aggregatibacter segnis
ATCC 33393]
gi|315477181|gb|EFU67924.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Aggregatibacter segnis
ATCC 33393]
Length = 380
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 77/198 (38%), Gaps = 26/198 (13%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ A + L L V
Sbjct: 180 FTSWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVL 239
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
F+ + F G+V + W+ V A K + + +V PK G LW D AI + S+
Sbjct: 240 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLNMVFPKEGPVLWVDNLAITSTSK- 298
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGK---PSLDTKLIAGV 171
G H+ I + L A + P L+ K P T+ A
Sbjct: 299 -------NPEG----AHKLINYMLGAKAAEKLTLAIGYPTANLEAKKVLPKEITEDPAIY 347
Query: 172 PPAEILARCEFLEPLSEA 189
P AE+L + + + +A
Sbjct: 348 PTAEVLKNSHWQDDVGDA 365
>gi|398882696|ref|ZP_10637662.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398198363|gb|EJM85321.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
Length = 362
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 21/136 (15%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLL 272
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTK 166
AIPA + TK+ H +I + L + V K +D +
Sbjct: 273 AIPADAS-NTKE-----------AHAFINYLLDPQVIAKVSASVGYANPNPAAKQFMDPE 320
Query: 167 LIAG---VPPAEILAR 179
L+ PP E+L +
Sbjct: 321 LVNNPEVYPPQEVLDK 336
>gi|374335858|ref|YP_005092545.1| extracellular solute-binding protein [Oceanimonas sp. GK1]
gi|372985545|gb|AEY01795.1| extracellular solute-binding protein [Oceanimonas sp. GK1]
Length = 349
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 81/201 (40%), Gaps = 26/201 (12%)
Query: 9 WKDLWLPELAGRISMVNSPRE-------VIGTQAAAGRI----AVQQNLALLGNQVRLFD 57
W DLW P+ G++ + + RE +G A + A + L L + V L++
Sbjct: 152 WADLWSPDFNGQLMLTDDIRENYQMALLTLGHSANSRDSQEIEAAYEKLVTLKDNVLLYN 211
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ + G+ I + WS + N+ V P+ GA W D AIPA ++
Sbjct: 212 SDNPRMPYVTGETSIGLLWSDQAYKTQQDGLNLEYVYPEEGAIFWVDSAAIPANAK---- 267
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG---VPPA 174
HQ++++ ++ A A + + L K L +L P A
Sbjct: 268 --------SVEAAHQFLDYLMRPAVAAQIISELGLAVPNQGAKALLPAELATNPVLFPSA 319
Query: 175 EILARCEFLEPLSEATLSDYE 195
E++ + F + L + L+ YE
Sbjct: 320 EVVEKGHFQDDLGDEVLAIYE 340
>gi|300813078|ref|ZP_07093456.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313123351|ref|YP_004033610.1| spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|422845339|ref|ZP_16892049.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
gi|300495919|gb|EFK31063.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312279914|gb|ADQ60633.1| Spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|325684511|gb|EGD26675.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 360
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 36/210 (17%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVR 54
K W DLW + G+I +V+S R+++G T +A ++A + L +G V+
Sbjct: 158 KSWNDLWKKKYQGQILLVDSARDIMGMSLVSMGYSMNDTNSAHLKVA-KAKLDKIGKNVK 216
Query: 55 LFDRTHYLKVFGI-GDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
LK++ + + WI V +S + + + S++ VVP G++LW D IP +
Sbjct: 217 AIVADE-LKMYMVQNEAWIGVTYSGEAATMMDQDSHIHYVVPAQGSNLWFDNIVIPKTCK 275
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKL 167
K+ +++I F L Q A + ++T ++LL D +
Sbjct: 276 --NKEAA----------YKFINFMLEPKNAAQNAEYIGYSTPNTAAQKLLPKSVREDKQF 323
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWL 197
PP + E L + + +Y L
Sbjct: 324 ---YPPMSTVKNLEVYRDLPSSKVQEYNDL 350
>gi|386265113|ref|YP_005828605.1| Spermidine/putrescine ABC transporter, periplasmic-binding protein
[Haemophilus influenzae R2846]
gi|309972349|gb|ADO95550.1| Spermidine/putrescine ABC transporter, periplasmic-binding protein
[Haemophilus influenzae R2846]
Length = 350
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 34/185 (18%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVVT-F 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+ I + W+ A K ++ V PK GA W D +AIP++++
Sbjct: 213 NSDSPEVPYVQGEATIGMIWNGSAYLAQKENPSLQFVYPKEGAIFWMDNYAIPSSAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G H++I+F L+ A + F+ + LL + + D KL
Sbjct: 270 -----NVEGA----HKFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSAEVANDPKLF-- 318
Query: 171 VPPAE 175
PPAE
Sbjct: 319 -PPAE 322
>gi|357050375|ref|ZP_09111575.1| hypothetical protein HMPREF9478_01558 [Enterococcus saccharolyticus
30_1]
gi|355381460|gb|EHG28584.1| hypothetical protein HMPREF9478_01558 [Enterococcus saccharolyticus
30_1]
Length = 357
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 88/221 (39%), Gaps = 40/221 (18%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIG------------------TQAAAGRIAVQQ 44
E K+W DLW PEL I +++ REVIG T A +
Sbjct: 152 EGEIKEWDDLWKPELKDSIMLIDGAREVIGLGLNSLGYSLNSKDDKQLTAAFNKLRKMTP 211
Query: 45 NL-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
N+ A++ ++++++ + +AV +S + + ++ V+P G++LW
Sbjct: 212 NIKAIVADEIKMYMANE--------EASVAVTFSGEAADMMYENEHIHYVIPSEGSNLWF 263
Query: 104 DLWAIPAASRLETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKP 161
D IP S+ E G + ++ + E Q A + ++T K LL +
Sbjct: 264 DNMVIPKTSKNE--------EGAYAFLNFMLEPENAAQNAEYIGYSTPNKKALALLPDEI 315
Query: 162 SLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
+ D + P E++ E E L L Y L L+
Sbjct: 316 TQDKQF---YPSDELMKHLEVYENLGAQYLGIYNDLFLELK 353
>gi|336177004|ref|YP_004582379.1| family 1 extracellular solute-binding protein [Frankia symbiont of
Datisca glomerata]
gi|334857984|gb|AEH08458.1| extracellular solute-binding protein family 1 [Frankia symbiont of
Datisca glomerata]
Length = 462
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 9 WKDLWLPELAGRISMVNSPREV-------IGTQAAAGRIAVQQNLA-LLGNQ-----VRL 55
++DL+ P AGR+ M R++ +G A Q A LL Q VR
Sbjct: 249 FRDLFDPAFAGRVGMFGDARDLPNFTLVGMGITPETSTPADWQKAAELLRRQRDARIVRD 308
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
+ + Y++ GD+W+++ WS D+ A +++ V+P G LW D IP
Sbjct: 309 YYQQDYIEPLKKGDIWLSMAWSGDIFQANSEGADLRFVIPAEGGILWTDSMCIP 362
>gi|398879044|ref|ZP_10634147.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398197590|gb|EJM84567.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 362
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 21/136 (15%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLL 272
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTK 166
AIPA + TK+ H +I + L + V K +D +
Sbjct: 273 AIPADAS-NTKE-----------AHAFINYLLDPQVIAKVSASVGYANPNPAAKQFMDPE 320
Query: 167 LIAG---VPPAEILAR 179
L+ PP E+L +
Sbjct: 321 LVNNPEVYPPQEVLDK 336
>gi|354597990|ref|ZP_09016007.1| extracellular solute-binding protein family 1 [Brenneria sp.
EniD312]
gi|353675925|gb|EHD21958.1| extracellular solute-binding protein family 1 [Brenneria sp.
EniD312]
Length = 369
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T +AA + + L L +R F + Y+ G
Sbjct: 176 VSFLDAPEEIFATVLNYQGKDANSSKAADYNGSATELLLKLRPSIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV+ A R NV +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWAGDVMQAANRAKEAKNGVNVHYSIPKEGALAFFDVFAVPADAK 286
>gi|262402124|ref|ZP_06078685.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC586]
gi|262350906|gb|EEZ00039.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC586]
Length = 343
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 83/212 (39%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + KG L
Sbjct: 265 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKSSNDKFKGVAPL--- 309
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 310 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 337
>gi|257870119|ref|ZP_05649772.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
gi|257804283|gb|EEV33105.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
Length = 357
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 88/221 (39%), Gaps = 40/221 (18%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIG------------------TQAAAGRIAVQQ 44
E K+W DLW PEL I +++ REVIG T A +
Sbjct: 152 EGEIKEWDDLWKPELKDSIMLIDGAREVIGLGLNSLGYSLNSKDDKQLTAAFNKLRKMTP 211
Query: 45 NL-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
N+ A++ ++++++ + +AV +S + + ++ V+P G++LW
Sbjct: 212 NIKAIVADEIKMYMANE--------EASVAVTFSGEAADMMYENEHIHYVIPSEGSNLWF 263
Query: 104 DLWAIPAASRLETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKP 161
D IP S+ E G + ++ + E Q A + ++T K LL +
Sbjct: 264 DNMVIPKTSKNE--------EGAYAFLNFMLEPENAAQNAEYIGYSTPNKKALALLPDEI 315
Query: 162 SLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
+ D + P E++ E E L L Y L L+
Sbjct: 316 TQDKQF---YPSDELMKHLEVYENLGAQYLGIYNDLFLELK 353
>gi|149911832|ref|ZP_01900434.1| spermidine/putrescine ABC transporter,
periplasmicspermidine/putrescine-binding protein
[Moritella sp. PE36]
gi|149805085|gb|EDM65109.1| spermidine/putrescine ABC transporter,
periplasmicspermidine/putrescine-binding protein
[Moritella sp. PE36]
Length = 344
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 32/200 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQ-AAAGRIAVQQN----------LALLGNQVRLFD 57
W DLW P+ G++ + + RE+ G A QN L L V +F+
Sbjct: 146 WTDLWDPKWEGQLLLTDDAREIFHMALKIQGHSANTQNEEELAQAYELLKKLMPNVLVFN 205
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+V + + W+ A + S++ +V PK GA W D AIP ++
Sbjct: 206 SDTPANPYIAGEVELGMIWNGSTYMAQQEDSDITMVYPKEGAVFWMDSLAIPKNAK---- 261
Query: 118 QIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLIAGV 171
+H+ I+F L + A + + T K ++LL K + K++
Sbjct: 262 --------NVDAVHKLIDFLLRPEVAAEVALEIGYPTPNKAAKKLLP-KEFTENKIV--F 310
Query: 172 PPAEILARCEFLEPLSEATL 191
P AE +A EF + EA +
Sbjct: 311 PDAETIANGEFHSDVGEANI 330
>gi|152989077|ref|YP_001345787.1| polyamine transport protein [Pseudomonas aeruginosa PA7]
gi|452878415|ref|ZP_21955626.1| polyamine transport protein [Pseudomonas aeruginosa VRFPA01]
gi|150964235|gb|ABR86260.1| polyamine transport protein [Pseudomonas aeruginosa PA7]
gi|452184919|gb|EME11937.1| polyamine transport protein [Pseudomonas aeruginosa VRFPA01]
Length = 365
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ G++ +A G+S DV A R ++ V+PK GA+LW DL
Sbjct: 216 VSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLM 275
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALP-----FNTRVKLPEELLKGKP 161
AIPA ++ P + + + A A+P + V EE+ +
Sbjct: 276 AIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAVPGARPLMDKSVSDSEEVYPPQA 335
Query: 162 SLDTKLIAGVPPAEIL 177
LD ++ V PA++L
Sbjct: 336 VLDKAYVSAVLPAKVL 351
>gi|398895172|ref|ZP_10647050.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398181368|gb|EJM68937.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 362
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK GA+LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLL 272
Query: 107 AIPA 110
AIPA
Sbjct: 273 AIPA 276
>gi|398968596|ref|ZP_10682419.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398143680|gb|EJM32551.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 362
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK GA+LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLL 272
Query: 107 AIPA 110
AIPA
Sbjct: 273 AIPA 276
>gi|334119180|ref|ZP_08493267.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
gi|333458651|gb|EGK87268.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
Length = 376
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 36/202 (17%)
Query: 7 KDWKDLWL--PELAGRISMVNSPREVIG--------TQAAAGRIAVQQ---NLALLGNQV 53
+DW+ LW ELA R+++ + REV+G + + + V+Q L L +
Sbjct: 176 EDWEYLWQHKQELAKRMTLASDVREVMGAALRMLGYSLNSTNQEQVKQAYEKLVELKPAI 235
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F + GD+ +A+ +SSD + + VVPKSG+SLW D IP S
Sbjct: 236 ASFTTDAWRPQMLTGDLKVAMCYSSDANEVISDNDKLKYVVPKSGSSLWTDTLVIPKGS- 294
Query: 114 LETKQIGGRVRGPFP-LIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTK 166
P P ++WI F LQ A L F+T + LL + +
Sbjct: 295 ------------PNPEAAYKWINFMLQPDVAASLVERLSFSTPSEDAFSLLPPEVRENDI 342
Query: 167 LIAGVPPAEILARCEFLEPLSE 188
L P +L +CE + P+ +
Sbjct: 343 LF---PSEAVLKKCEGVAPVGK 361
>gi|407789477|ref|ZP_11136578.1| spermidine/putrescine-binding periplasmic protein [Gallaecimonas
xiamenensis 3-C-1]
gi|407206835|gb|EKE76785.1| spermidine/putrescine-binding periplasmic protein [Gallaecimonas
xiamenensis 3-C-1]
Length = 347
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 84/200 (42%), Gaps = 36/200 (18%)
Query: 9 WKDLWLPELAGRISMVNSPREV--IG----------TQAAAGRIAVQQNLALLGNQVRLF 56
WKDL+ PE GR+ + + REV IG T A + A + L+ N ++F
Sbjct: 150 WKDLFKPEFKGRLLLTDDVREVFQIGLALNGHSANTTDEAQIKQAYETLKPLIAN-TQVF 208
Query: 57 D----RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
+ R YL GDV I + W+ +V A N+A + PK GA W D +A+P S
Sbjct: 209 NSDAPRLPYLS----GDVDIGMIWNGEVYMANNEGGNLAYIYPKEGAIFWVDSFAVP--S 262
Query: 113 RLETKQIGGRVRGPF---PLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIA 169
E R + +E+ LP + LP+E LK P +
Sbjct: 263 HAEHPDAAHRFINYMMRPEVAKACVEYVGYATPNLP--GKALLPDE-LKNSPVI------ 313
Query: 170 GVPPAEILARCEFLEPLSEA 189
P A +A+ EF + +A
Sbjct: 314 -FPDAATVAKGEFQTDVGDA 332
>gi|197334793|ref|YP_002156114.1| spermidine/putrescine-binding periplasmic protein [Vibrio fischeri
MJ11]
gi|423686064|ref|ZP_17660872.1| spermidine/putrescine ABC transporter periplasmic substrate-binding
protein [Vibrio fischeri SR5]
gi|197316283|gb|ACH65730.1| spermidine/putrescine-binding periplasmic protein [Vibrio fischeri
MJ11]
gi|371494132|gb|EHN69730.1| spermidine/putrescine ABC transporter periplasmic substrate-binding
protein [Vibrio fischeri SR5]
Length = 347
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 27/208 (12%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREV-------IGTQAAAGR----IAVQQNLALL 49
MN N W D W + G++ M++ REV +G A A + L L
Sbjct: 142 MNPNELHSWNDFWDEKWQGQLMMMDDSREVFHIALTKLGYSANTTNPEEIKAAYEELKKL 201
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
+ +F+ + G+ + + W+ A + +N+ +V P+ GA W D AIP
Sbjct: 202 MPNILVFNSDFPANPYLAGETSVGMLWNGSAYMAREEGANIQIVWPEKGAIFWMDSLAIP 261
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIA 169
A + K I HQ ++F L+ A + P + P L +
Sbjct: 262 AGA----KNIDAA--------HQMMDFLLRPENAAKIALEIGYPTPVKSAYPLLPKEFAN 309
Query: 170 G---VPPAEILARCEFLEPLSEA-TLSD 193
PP ++ E+ + + EA TL D
Sbjct: 310 DPNIFPPQSVMDSGEWQDEVGEASTLYD 337
>gi|386056365|ref|YP_005972887.1| polyamine transport protein [Pseudomonas aeruginosa M18]
gi|392981709|ref|YP_006480296.1| polyamine transport protein [Pseudomonas aeruginosa DK2]
gi|419756621|ref|ZP_14282967.1| polyamine transport protein [Pseudomonas aeruginosa PADK2_CF510]
gi|421151364|ref|ZP_15610979.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 14886]
gi|347302671|gb|AEO72785.1| polyamine transport protein [Pseudomonas aeruginosa M18]
gi|384396994|gb|EIE43411.1| polyamine transport protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392317214|gb|AFM62594.1| polyamine transport protein [Pseudomonas aeruginosa DK2]
gi|404527401|gb|EKA37562.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 14886]
gi|453045675|gb|EME93393.1| polyamine transport protein [Pseudomonas aeruginosa PA21_ST175]
Length = 365
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ G++ +A G+S DV A R ++ V+PK GA+LW DL
Sbjct: 216 VSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLM 275
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALP-----FNTRVKLPEELLKGKP 161
AIPA ++ P + + + A A+P + V EE+ +
Sbjct: 276 AIPADAKAADNAYAFIDYLLRPEVISKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQA 335
Query: 162 SLDTKLIAGVPPAEIL 177
LD ++ V PA++L
Sbjct: 336 VLDKLYVSAVLPAKVL 351
>gi|238751802|ref|ZP_04613289.1| Putrescine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
gi|238709931|gb|EEQ02162.1| Putrescine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
Length = 369
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T QA + L L +R F + Y+ G
Sbjct: 176 VSFLDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +AVGW+ D+L A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAVGWAGDILQASNRAKEANNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|254237466|ref|ZP_04930789.1| polyamine transport protein [Pseudomonas aeruginosa C3719]
gi|126169397|gb|EAZ54908.1| polyamine transport protein [Pseudomonas aeruginosa C3719]
Length = 365
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ G++ +A G+S DV A R ++ V+PK GA+LW DL
Sbjct: 216 VSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLM 275
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALP-----FNTRVKLPEELLKGKP 161
AIPA ++ P + + + A A+P + V EE+ +
Sbjct: 276 AIPADAKASDNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQA 335
Query: 162 SLDTKLIAGVPPAEIL 177
LD ++ V PA++L
Sbjct: 336 VLDKLYVSAVLPAKVL 351
>gi|145223724|ref|YP_001134402.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK]
gi|145216210|gb|ABP45614.1| extracellular solute-binding protein, family 1 [Mycobacterium
gilvum PYR-GCK]
Length = 393
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 90/210 (42%), Gaps = 33/210 (15%)
Query: 10 KDLWLPELAGRISMVNSPREVIG----TQAAA----GRIAVQQNLALLGNQ-----VRLF 56
DLW P GR+S+++ ++ +G +Q + +VQ+ + L+ Q +R F
Sbjct: 192 DDLWDPAFKGRVSLLSDTQDGLGMIMLSQGNSPENPSTESVQRAVDLVREQNDRGQIRRF 251
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
Y G++ +A +S DV+ ++ +VP+SG + + D IP ++ +
Sbjct: 252 TGNDYADDLAAGNIAVAQAYSGDVVQLQADNPDLQFIVPQSGGTTFLDTMVIPYTTQNQK 311
Query: 117 KQIGGRVRGPFPLIHQWIEFCL---QTARALPFNTRV----KLPEELLKGKPSLDTKLIA 169
WI++ A+ + F V ++ EEL K P+ + +
Sbjct: 312 A------------AEAWIDYVYDRANYAKLVAFTQFVPVLSEMTEELEKVDPAAASNPLI 359
Query: 170 GVPPAEILARCEFLEPLSEATLSDYEWLVA 199
PPA++L RC+ L++ ++ A
Sbjct: 360 N-PPADVLERCKSWAALTDEQTQEFNTAYA 388
>gi|337751378|ref|YP_004645540.1| ABC transporter substrate-binding protein [Paenibacillus
mucilaginosus KNP414]
gi|336302567|gb|AEI45670.1| extracellular solute-binding protein family 1 [Paenibacillus
mucilaginosus KNP414]
Length = 358
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 48/217 (22%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGT------------------QAAAGRIAVQQNL- 46
F W DLW +L +I +V+ REV+G +A A + N+
Sbjct: 156 FTSWNDLWDEKLENQILLVDGAREVMGMGLNSLGYSLNDRDEAHLQEAKAKLDTLTPNVK 215
Query: 47 ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 106
A++G+++++ + + + V WS D + + VVP+ G++LW D
Sbjct: 216 AIVGDEIKM--------LLANEEAAVGVVWSGDASEIMDENDKLDYVVPEEGSNLWFDNM 267
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGK 160
IP + + G H +I F L Q A + ++T + E L +
Sbjct: 268 VIPKTAH--------NIEGA----HAFINFMLDPEVAAQNAEYVGYSTPNESALEFLPEE 315
Query: 161 PSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
S D + P E+ + E E L + LS Y L
Sbjct: 316 ISGDKRF---YPDPELTEKLEVYENLGKRMLSHYNEL 349
>gi|304415318|ref|ZP_07396003.1| periplasmic-binding component of putrescine ABC transporter
[Candidatus Regiella insecticola LSR1]
gi|304282836|gb|EFL91314.1| periplasmic-binding component of putrescine ABC transporter
[Candidatus Regiella insecticola LSR1]
Length = 379
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T Q A+ L L L +R F + Y+ G
Sbjct: 186 VSFLDAPSEIFATVLHYLGKDANSQLASDYTGSATELLLTLRPNIRYFHSSKYINDLANG 245
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +AVGW+ D++ A R+ N+A +PK GA + D++A+PA ++
Sbjct: 246 DICVAVGWNGDIVQAANRIKEANNGVNIAYSIPKEGALVTFDVFAMPADAK 296
>gi|333900395|ref|YP_004474268.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333115660|gb|AEF22174.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 361
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 46 LALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGA 99
L L V F + Y+ GD+ +AVG+S DV+ A R + + V+PK GA
Sbjct: 205 LQKLAPSVTYFHSSRYISDLANGDICVAVGYSGDVMQAQSRAKDAGKSVDIRYVIPKEGA 264
Query: 100 SLWADLWAIPAASR 113
+LW D+ AIP +R
Sbjct: 265 NLWFDMLAIPCDAR 278
>gi|15603249|ref|NP_246323.1| protein PotD [Pasteurella multocida subsp. multocida str. Pm70]
gi|12721758|gb|AAK03468.1| PotD [Pasteurella multocida subsp. multocida str. Pm70]
Length = 311
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 25/147 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ + + REV T+ + A ++ + L+ N V +F
Sbjct: 115 WADLWKPEYKGKVLLTSDAREVFHIALLLNGKSPNTTKELEIKQAYEKLVKLMPN-VLVF 173
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V + + W+ K SN+ + PK GA W D +AIP ++
Sbjct: 174 NSDSPEVPYVQGEVALGMIWNGSAYLGNKENSNIQFIYPKEGAIFWMDNYAIPKKAK--- 230
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA 143
V G + Q+I+F L+ A
Sbjct: 231 -----NVEGAY----QFIDFLLRPENA 248
>gi|315444052|ref|YP_004076931.1| spermidine/putrescine-binding periplasmic protein [Mycobacterium
gilvum Spyr1]
gi|315262355|gb|ADT99096.1| spermidine/putrescine-binding periplasmic protein [Mycobacterium
gilvum Spyr1]
Length = 393
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 90/210 (42%), Gaps = 33/210 (15%)
Query: 10 KDLWLPELAGRISMVNSPREVIG----TQAAA----GRIAVQQNLALLGNQ-----VRLF 56
DLW P GR+S+++ ++ +G +Q + +VQ+ + L+ Q +R F
Sbjct: 192 DDLWDPAFKGRVSLLSDTQDGLGMIMLSQGNSPENPSTESVQRAVDLVREQNDRGQIRRF 251
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
Y G++ +A +S DV+ ++ +VP+SG + + D IP ++ +
Sbjct: 252 TGNDYADDLAAGNIAVAQAYSGDVVQLQADNPDLQFIVPQSGGTTFLDTMVIPYTTQNQK 311
Query: 117 KQIGGRVRGPFPLIHQWIEFCL---QTARALPFNTRV----KLPEELLKGKPSLDTKLIA 169
WI++ A+ + F V ++ EEL K P+ + +
Sbjct: 312 A------------AEAWIDYVYDRANYAKLVAFTQFVPVLSEMTEELEKVDPAAASNPLI 359
Query: 170 GVPPAEILARCEFLEPLSEATLSDYEWLVA 199
PPA++L RC+ L++ ++ A
Sbjct: 360 N-PPADVLERCKSWAALTDEQTQEFNTAYA 388
>gi|322833214|ref|YP_004213241.1| extracellular solute-binding protein [Rahnella sp. Y9602]
gi|384258392|ref|YP_005402326.1| putrescine ABC transporter periplasmic-binding protein [Rahnella
aquatilis HX2]
gi|321168415|gb|ADW74114.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602]
gi|380754368|gb|AFE58759.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rahnella aquatilis HX2]
Length = 369
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T +A+ A L L +R F + Y+ G
Sbjct: 176 VSFLDAPAEIYATVLNYLHLDPNSTKASDYTGAANDLLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV+ A R NVA +PK GA + D++AIPA ++
Sbjct: 236 DICVAIGWAGDVMQAGNRAKEAKNGVNVAYSIPKEGALAFFDVFAIPADAK 286
>gi|407976320|ref|ZP_11157220.1| extracellular solute-binding protein family 1 [Nitratireductor
indicus C115]
gi|407428218|gb|EKF40902.1| extracellular solute-binding protein family 1 [Nitratireductor
indicus C115]
Length = 365
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 55/124 (44%), Gaps = 22/124 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
W L+ PELA + I M++S EVI T +A + L +
Sbjct: 156 WDVLFKPELAAKFKDCGIHMLDSASEVIRAALIYQGLDPNTPSAEDLAKAEALLVAVRPY 215
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
VR F + Y+ GDV +A+G+S D+ A R + V +PK GA LW D
Sbjct: 216 VRKFHSSEYINGLANGDVCLALGYSGDIFQARDRAAEADQGVEVGYSIPKEGALLWFDQM 275
Query: 107 AIPA 110
AIPA
Sbjct: 276 AIPA 279
>gi|227499864|ref|ZP_03929957.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Anaerococcus tetradius
ATCC 35098]
gi|227217973|gb|EEI83246.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Anaerococcus tetradius
ATCC 35098]
Length = 362
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 48/222 (21%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIA-----------VQQNL-------- 46
F WK+LW P+ G I + RE +G A ++ V L
Sbjct: 155 FSSWKNLWDPKFKGEILSFDGARETLGIGLLADNLSLNTCDKDKLVRVSNELVGYMANVR 214
Query: 47 ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 106
A+L +++R++ +G+ + + +S D A+ ++A +PK G+++W D
Sbjct: 215 AILADEIRMY--------MALGEANVGITFSGDAASAIDSNPDLAYAIPKEGSNIWFDSM 266
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVK----LPEELLKGK 160
IP S+ + I+ + E Q A + + T K L + ++
Sbjct: 267 VIPKTSK--------NTEAAYAFINFMLRAENAAQNAEYISYATPNKKALALIDPAMRNN 318
Query: 161 PSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
+L P +++ R E + L + T Y L +L+
Sbjct: 319 KTL-------YPDDDVIDRLEVFKALDKKTTILYNDLFLDLK 353
>gi|403237367|ref|ZP_10915953.1| spermidine:putrescine ABC transporter [Bacillus sp. 10403023]
Length = 358
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 85/215 (39%), Gaps = 44/215 (20%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQ-AAAGRIAVQQNL-ALLGNQVRLFDRTHYLK 63
F W DLW P L I V+ RE++G + G NL L+ + +L T +K
Sbjct: 155 FTSWNDLWDPSLKNEIIFVDGAREIMGMGLNSLGYSLNDTNLDHLMEAKDKLIKLTPNVK 214
Query: 64 VFGIGD----------VWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+GD I + WS D + ++ VVP G++LW D IP +
Sbjct: 215 AI-VGDEGKVLIQNREAAIGIVWSGDAADIMWENEDLNYVVPSEGSNLWFDNMVIPKTA- 272
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVK-----LPEELLKGKPS 162
K I G HQ+I F L Q + ++T K +PE+++
Sbjct: 273 ---KNIDGA--------HQFINFMLDAEIAAQNTEYVSYSTPNKEALQYMPEDMVT---- 317
Query: 163 LDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
D + P E+ + E E L + L+ Y L
Sbjct: 318 -DERF---YPSPELTEKLEVYENLGKKNLAIYNQL 348
>gi|126729921|ref|ZP_01745733.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sagittula stellata E-37]
gi|126709301|gb|EBA08355.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sagittula stellata E-37]
Length = 365
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
++ F + Y+ G++ +AVGWS DVL A R + VA ++PK GA +W D+
Sbjct: 216 IQKFHSSEYINALANGEICVAVGWSGDVLQARDRAAEADNGVEVAYIIPKEGAQMWFDMM 275
Query: 107 AIP 109
A+P
Sbjct: 276 AVP 278
>gi|417845513|ref|ZP_12491541.1| Spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
haemolyticus M21639]
gi|341955083|gb|EGT81548.1| Spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
haemolyticus M21639]
Length = 360
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 18/158 (11%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DLW PE A ++ +++ REV TQ + L L V
Sbjct: 160 FTSWADLWKPEFANKVQLLDDVREVFNIALLKIGQDPNTQDPTIIKQAYEELLKLRPNVL 219
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP----- 109
F+ + F G+V + W+ V A K + + +V PK G LW D AIP
Sbjct: 220 SFNSDNPANSFISGEVEVGQLWNGSVRIAKKEKAPLDMVFPKEGPVLWVDTLAIPKTAKN 279
Query: 110 --AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALP 145
A +L +G + L + L+ +ALP
Sbjct: 280 PDGAHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALP 317
>gi|421165155|ref|ZP_15623497.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 700888]
gi|404542820|gb|EKA52128.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 700888]
Length = 365
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ G++ +A G+S DV A R ++ V+PK GA+LW DL
Sbjct: 216 VSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLM 275
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALP-----FNTRVKLPEELLKGKP 161
AIPA ++ P + + + A A+P + V EE+ +
Sbjct: 276 AIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQA 335
Query: 162 SLDTKLIAGVPPAEIL 177
LD ++ V PA++L
Sbjct: 336 VLDKLYVSAVLPAKVL 351
>gi|421253999|ref|ZP_15709011.1| PotD, partial [Pasteurella multocida subsp. multocida str.
Anand1_buffalo]
gi|401693164|gb|EJS87362.1| PotD, partial [Pasteurella multocida subsp. multocida str.
Anand1_buffalo]
Length = 329
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 25/147 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ + + REV T+ + A ++ + L+ N V +F
Sbjct: 133 WADLWKPEYKGKVLLTSDAREVFHIALLLNGKSPNTTKELEIKQAYEKLVKLMPN-VLVF 191
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V + + W+ K SN+ + PK GA W D +AIP ++
Sbjct: 192 NSDSPEVPYVQGEVALGMIWNGSAYLGNKENSNIQFIYPKEGAIFWMDNYAIPKKAK--- 248
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA 143
V G + Q+I+F L+ A
Sbjct: 249 -----NVEGAY----QFIDFLLRPENA 266
>gi|419299149|ref|ZP_13841162.1| putrescine-binding periplasmic protein [Escherichia coli DEC11C]
gi|419873077|ref|ZP_14395081.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H2 str. CVM9450]
gi|378155103|gb|EHX16163.1| putrescine-binding periplasmic protein [Escherichia coli DEC11C]
gi|388332378|gb|EIK99049.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H2 str. CVM9450]
Length = 295
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASRLETKQI 119
+A+PA ++ +TK I
Sbjct: 280 FAMPADAKKKTKPI 293
>gi|375309572|ref|ZP_09774853.1| spermidine/putrescine import ABC transporter
spermidine/putrescine-binding protein potd
[Paenibacillus sp. Aloe-11]
gi|375078881|gb|EHS57108.1| spermidine/putrescine import ABC transporter
spermidine/putrescine-binding protein potd
[Paenibacillus sp. Aloe-11]
Length = 357
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 89/218 (40%), Gaps = 50/218 (22%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQAAA--------GRIAVQQNL----------- 46
F W LW P+L + +V+ RE++G + + +QQ L
Sbjct: 155 FHSWDGLWDPKLRNNLLLVDGAREIMGMSLNSLHYSLNDTNKAHLQQALTKLEKLAPNVK 214
Query: 47 ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 106
A++G+++++ + + V WS D + + + +VP G++LW D
Sbjct: 215 AVVGDEIKM--------LLANEEAAAGVVWSGDASEIMDQNDKLDYIVPDEGSNLWFDNM 266
Query: 107 AIP-AASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKG 159
IP A+ ++ H++I F + Q A + ++T K ++LL
Sbjct: 267 VIPKTATHVDAA-------------HKFINFMMQPDVAAQNAEFVGYSTPNKDGKKLLPA 313
Query: 160 KPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
S D + PP+EI + E + L + L+ Y L
Sbjct: 314 DISGDERF---YPPSEITDKLEVYDNLGKRMLAHYNEL 348
>gi|397688814|ref|YP_006526133.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
stutzeri DSM 10701]
gi|395810370|gb|AFN79775.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 10701]
Length = 361
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 21/136 (15%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
VR F + Y+ G++ IA G+S DV A R ++A +PK G +LW D+
Sbjct: 212 VRYFHSSKYVSDLANGNICIAAGFSGDVFQAAARADEAGKGIDIAYAIPKEGGNLWFDML 271
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTK 166
AIPA ++ + H +I + L+ + V LK +D +
Sbjct: 272 AIPADAQNVDEA------------HAFINYLLEPEVIASVSDYVGYANPNLKAGELMDPE 319
Query: 167 L---IAGVPPAEILAR 179
+ ++ PP E+L R
Sbjct: 320 VRNDVSVYPPQEVLDR 335
>gi|336112957|ref|YP_004567724.1| family 1 extracellular solute-binding protein [Bacillus coagulans
2-6]
gi|335366387|gb|AEH52338.1| extracellular solute-binding protein family 1 [Bacillus coagulans
2-6]
Length = 357
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 40/210 (19%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGT------------------QAAAGRIAVQQNL-ALL 49
W DLW P+L +I +V+ REV+G QA A + N+ A++
Sbjct: 158 WDDLWDPDLKNQILLVDGAREVMGMGLNSLHYSLNDTNEKHLQQAKAKLDRLMPNVKAIV 217
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G+++++ + G+ + V WS D + + VVP G++LW D IP
Sbjct: 218 GDEIKM--------LLANGEASLGVVWSGDAAEIMSENKKLNYVVPSEGSNLWFDNMVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIE--FCLQTARALPFNTRVKLPEELLKGKPSLDTKL 167
++ V G I+ ++ Q A + ++T + +LL S D +
Sbjct: 270 KTAK--------NVDGALKFINFMLDPKNAAQNAEYVGYSTPNQAALQLLPKSISGDRRF 321
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWL 197
P A + + E + L + L+ Y L
Sbjct: 322 ---YPDAALTKKLEVYKNLGKKKLARYNEL 348
>gi|15595498|ref|NP_248992.1| polyamine transporter [Pseudomonas aeruginosa PAO1]
gi|107099282|ref|ZP_01363200.1| hypothetical protein PaerPA_01000294 [Pseudomonas aeruginosa PACS2]
gi|116054027|ref|YP_788470.1| polyamine transport protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889041|ref|YP_002437905.1| polyamine transport protein [Pseudomonas aeruginosa LESB58]
gi|254243398|ref|ZP_04936720.1| polyamine transport protein [Pseudomonas aeruginosa 2192]
gi|296386794|ref|ZP_06876293.1| polyamine transport protein [Pseudomonas aeruginosa PAb1]
gi|313112088|ref|ZP_07797872.1| polyamine transport protein [Pseudomonas aeruginosa 39016]
gi|355646504|ref|ZP_09054459.1| hypothetical protein HMPREF1030_03545 [Pseudomonas sp. 2_1_26]
gi|386063282|ref|YP_005978586.1| polyamine transport protein [Pseudomonas aeruginosa NCGM2.S1]
gi|416878351|ref|ZP_11920375.1| polyamine transport protein [Pseudomonas aeruginosa 152504]
gi|418584347|ref|ZP_13148409.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418591159|ref|ZP_13155060.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P2]
gi|420136865|ref|ZP_14644878.1| polyamine transport protein [Pseudomonas aeruginosa CIG1]
gi|421157298|ref|ZP_15616680.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 25324]
gi|421172021|ref|ZP_15629801.1| polyamine transport protein [Pseudomonas aeruginosa CI27]
gi|421178211|ref|ZP_15635826.1| polyamine transport protein [Pseudomonas aeruginosa E2]
gi|421514913|ref|ZP_15961599.1| polyamine transport protein [Pseudomonas aeruginosa PAO579]
gi|424943286|ref|ZP_18359049.1| polyamine transport protein [Pseudomonas aeruginosa NCMG1179]
gi|451984064|ref|ZP_21932323.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
gi|9946146|gb|AAG03690.1|AE004468_2 polyamine transport protein [Pseudomonas aeruginosa PAO1]
gi|115589248|gb|ABJ15263.1| polyamine transport protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126196776|gb|EAZ60839.1| polyamine transport protein [Pseudomonas aeruginosa 2192]
gi|218769264|emb|CAW25024.1| polyamine transport protein [Pseudomonas aeruginosa LESB58]
gi|310884374|gb|EFQ42968.1| polyamine transport protein [Pseudomonas aeruginosa 39016]
gi|334838401|gb|EGM17123.1| polyamine transport protein [Pseudomonas aeruginosa 152504]
gi|346059732|dbj|GAA19615.1| polyamine transport protein [Pseudomonas aeruginosa NCMG1179]
gi|348031841|dbj|BAK87201.1| polyamine transport protein [Pseudomonas aeruginosa NCGM2.S1]
gi|354828463|gb|EHF12583.1| hypothetical protein HMPREF1030_03545 [Pseudomonas sp. 2_1_26]
gi|375045845|gb|EHS38418.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375050052|gb|EHS42538.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P2]
gi|403250363|gb|EJY63806.1| polyamine transport protein [Pseudomonas aeruginosa CIG1]
gi|404348641|gb|EJZ74978.1| polyamine transport protein [Pseudomonas aeruginosa PAO579]
gi|404538248|gb|EKA47791.1| polyamine transport protein [Pseudomonas aeruginosa CI27]
gi|404548541|gb|EKA57488.1| polyamine transport protein [Pseudomonas aeruginosa E2]
gi|404550731|gb|EKA59455.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 25324]
gi|451758300|emb|CCQ84846.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
Length = 365
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ G++ +A G+S DV A R ++ V+PK GA+LW DL
Sbjct: 216 VSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLM 275
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALP-----FNTRVKLPEELLKGKP 161
AIPA ++ P + + + A A+P + V EE+ +
Sbjct: 276 AIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQA 335
Query: 162 SLDTKLIAGVPPAEIL 177
LD ++ V PA++L
Sbjct: 336 VLDKLYVSAVLPAKVL 351
>gi|381352986|pdb|3TTL|A Chain A, Crystal Structure Of Apo-Spue
gi|381352987|pdb|3TTL|B Chain B, Crystal Structure Of Apo-Spue
Length = 340
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ G++ +A G+S DV A R ++ V+PK GA+LW DL
Sbjct: 194 VSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLM 253
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALP-----FNTRVKLPEELLKGKP 161
AIPA ++ P + + + A A+P + V EE+ +
Sbjct: 254 AIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQA 313
Query: 162 SLDTKLIAGVPPAEIL 177
LD ++ V PA++L
Sbjct: 314 VLDKLYVSAVLPAKVL 329
>gi|422642389|ref|ZP_16705807.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae Cit 7]
gi|440745316|ref|ZP_20924611.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP39023]
gi|330954771|gb|EGH55031.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae Cit 7]
gi|440372683|gb|ELQ09469.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP39023]
Length = 364
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKSRAEEAGKGVKIAYSIPKEGGNLWFDMLAIPADSK 281
>gi|302189523|ref|ZP_07266196.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. syringae 642]
Length = 364
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKSRAEEAGKGVKIAYSIPKEGGNLWFDMLAIPADSK 281
>gi|398921988|ref|ZP_10660067.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398163704|gb|EJM51855.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 362
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK GA+LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLL 272
Query: 107 AIPA 110
A+PA
Sbjct: 273 AVPA 276
>gi|70730318|ref|YP_260057.1| periplasmic putrescine-binding protein [Pseudomonas protegens Pf-5]
gi|68344617|gb|AAY92223.1| periplasmic putrescine-binding protein [Pseudomonas protegens Pf-5]
Length = 362
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 21 ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
+SM++SP EV ++ + L L + F + Y+ GD
Sbjct: 170 VSMMDSPDEVFPAVLNYLGLDPRSENPEDYKKAEAKLLTLRPYITYFHSSKYVSDLANGD 229
Query: 70 VWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 110
+ IA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 230 ICIAFGYSGDVFQAANRAREAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|407776772|ref|ZP_11124044.1| extracellular solute-binding protein [Nitratireductor pacificus
pht-3B]
gi|407301468|gb|EKF20588.1| extracellular solute-binding protein [Nitratireductor pacificus
pht-3B]
Length = 365
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 22/124 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
W L+ PE+A + I M++S EV+ T +A ++ L +
Sbjct: 156 WDVLFQPEVAAKFKDCGIHMLDSASEVVRAALIYQGLNPNTPSADDLARAEELLTAVRPN 215
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
VR F + Y+ GD+ +A+G+S D+ A R + V +PK GA LW D
Sbjct: 216 VRKFHSSEYINGLANGDICLALGYSGDIFQARDRAAEADQGVAVGYAIPKEGALLWFDQM 275
Query: 107 AIPA 110
AIPA
Sbjct: 276 AIPA 279
>gi|383311230|ref|YP_005364040.1| spermidine/putrescine-binding periplasmic protein PotD3
[Pasteurella multocida subsp. multocida str. HN06]
gi|386835250|ref|YP_006240567.1| bacterial extracellular solute-binding protein, putative
[Pasteurella multocida subsp. multocida str. 3480]
gi|425064097|ref|ZP_18467222.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida X73]
gi|380872502|gb|AFF24869.1| spermidine/putrescine-binding periplasmic protein PotD3
[Pasteurella multocida subsp. multocida str. HN06]
gi|385201953|gb|AFI46808.1| bacterial extracellular solute-binding protein, putative
[Pasteurella multocida subsp. multocida str. 3480]
gi|404381690|gb|EJZ78158.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida X73]
Length = 349
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 25/147 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ + + REV T+ + A ++ + L+ N V +F
Sbjct: 153 WADLWKPEYKGKVLLTSDAREVFHIALLLNGKSPNTTKELEIKQAYEKLVKLMPN-VLVF 211
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V + + W+ K SN+ + PK GA W D +AIP ++
Sbjct: 212 NSDSPEVPYVQGEVALGMIWNGSAYLGNKENSNIQFIYPKEGAIFWMDNYAIPKKAK--- 268
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA 143
V G + Q+I+F L+ A
Sbjct: 269 -----NVEGAY----QFIDFLLRPENA 286
>gi|417851408|ref|ZP_12497153.1| PotD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
gi|338219480|gb|EGP05129.1| PotD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
Length = 349
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 25/147 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ + + REV T+ + A ++ + L+ N V +F
Sbjct: 153 WADLWKPEYKGKVLLTSDAREVFHIALLLNGKSPNTTKELEIKQAYEKLVKLMPN-VLVF 211
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V + + W+ K SN+ + PK GA W D +AIP ++
Sbjct: 212 NSDSPEVPYVQGEVALGMIWNGSAYLGNKENSNIQFIYPKEGAIFWMDNYAIPKKAK--- 268
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA 143
V G + Q+I+F L+ A
Sbjct: 269 -----NVEGAY----QFIDFLLRPENA 286
>gi|323494348|ref|ZP_08099460.1| extracellular solute-binding protein family 1 [Vibrio brasiliensis
LMG 20546]
gi|323311511|gb|EGA64663.1| extracellular solute-binding protein family 1 [Vibrio brasiliensis
LMG 20546]
Length = 369
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 46 LALLGN---QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPK 96
LALL + V F + Y+ GD+ +A+GWS DVL A R + +A +PK
Sbjct: 211 LALLKDIRPYVTYFHSSQYINDLANGDICVAIGWSGDVLQAADRAAEADNGVEIAYSIPK 270
Query: 97 SGASLWADLWAIPAASR 113
GA W DL AIP ++
Sbjct: 271 EGALAWFDLMAIPKEAK 287
>gi|138894300|ref|YP_001124753.1| spermidine/putrescine ABC transporter substrate-binding protein
[Geobacillus thermodenitrificans NG80-2]
gi|196248099|ref|ZP_03146801.1| extracellular solute-binding protein family 1 [Geobacillus sp.
G11MC16]
gi|134265813|gb|ABO66008.1| Spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Geobacillus thermodenitrificans NG80-2]
gi|196212883|gb|EDY07640.1| extracellular solute-binding protein family 1 [Geobacillus sp.
G11MC16]
Length = 357
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 85/215 (39%), Gaps = 48/215 (22%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQ------NL-AL 48
DW DLW P L +I +V+ REV+G T R A Q+ N+ A+
Sbjct: 157 DWNDLWDPSLRNQILLVDGAREVMGMALNSLGYSLNDTNKHHLREAKQKLDRLMPNVKAI 216
Query: 49 LGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 108
+G++++L + I V WS D + + VVP+ G++LW D I
Sbjct: 217 VGDEIKLLLVNE--------EAAIGVVWSGDAAEIIAENDKLDYVVPEEGSNLWFDNMVI 268
Query: 109 PAASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPS 162
P + K I G H +I F L Q A + ++T K L +
Sbjct: 269 PKTA----KNIEG--------AHAFINFMLDPKHAAQNAEYVGYSTPNKAALRYLPKDVA 316
Query: 163 LDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
D + P + + R E E L + L+ Y L
Sbjct: 317 NDQRF---YPDLDSVGRLEVYENLGKRMLAYYNEL 348
>gi|313141348|ref|ZP_07803541.1| spermidine/putrescine-binding protein [Helicobacter canadensis MIT
98-5491]
gi|313130379|gb|EFR47996.1| spermidine/putrescine-binding protein [Helicobacter canadensis MIT
98-5491]
Length = 347
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 27/191 (14%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W+DLW E G+++++ ++++ T+ + L +L D
Sbjct: 144 WRDLWRDEFKGKVAIIKDYQKMLQVSLVSLGYSRNTKEEEKITKAFEELLILAKNANFID 203
Query: 58 ----RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
L F G+ IA W +DV K N+ ++PK G +W D +A+ A ++
Sbjct: 204 FSKINNEDLISFFDGNNAIATMWINDVKAIQKYNKNIHFIIPKEGGMIWMDSFALTANAK 263
Query: 114 LETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGV 171
+ + I+ + + ++ A + FNT +K +L+K +LD
Sbjct: 264 --------NIENAYKFINFTLRPDISVKIANNIKFNTTLKY--DLIKQNLNLDNYQNIVF 313
Query: 172 PPAEILARCEF 182
+ L EF
Sbjct: 314 MSDDELNHFEF 324
>gi|253827147|ref|ZP_04870032.1| permidine/putrescine ABC transporter,periplasmic
spermidine/putrescine-binding protein [Helicobacter
canadensis MIT 98-5491]
gi|253510553|gb|EES89212.1| permidine/putrescine ABC transporter,periplasmic
spermidine/putrescine-binding protein [Helicobacter
canadensis MIT 98-5491]
Length = 348
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 27/191 (14%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W+DLW E G+++++ ++++ T+ + L +L D
Sbjct: 145 WRDLWRDEFKGKVAIIKDYQKMLQVSLVSLGYSRNTKEEEKITKAFEELLILAKNANFID 204
Query: 58 ----RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
L F G+ IA W +DV K N+ ++PK G +W D +A+ A ++
Sbjct: 205 FSKINNEDLISFFDGNNAIATMWINDVKAIQKYNKNIHFIIPKEGGMIWMDSFALTANAK 264
Query: 114 LETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGV 171
+ + I+ + + ++ A + FNT +K +L+K +LD
Sbjct: 265 --------NIENAYKFINFTLRPDISVKIANNIKFNTTLKY--DLIKQNLNLDNYQNIVF 314
Query: 172 PPAEILARCEF 182
+ L EF
Sbjct: 315 MSDDELNHFEF 325
>gi|378775234|ref|YP_005177477.1| spermidine/putrescine-binding periplasmic protein PotD3
[Pasteurella multocida 36950]
gi|421264132|ref|ZP_15715137.1| PotD [Pasteurella multocida subsp. multocida str. P52VAC]
gi|356597782|gb|AET16508.1| spermidine/putrescine-binding periplasmic protein PotD3
[Pasteurella multocida 36950]
gi|401688597|gb|EJS84160.1| PotD [Pasteurella multocida subsp. multocida str. P52VAC]
Length = 349
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 25/147 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ + + REV T+ + A ++ + L+ N V +F
Sbjct: 153 WADLWKPEYKGKVLLTSDAREVFHIALLLNGKSPNTTKELEIKQAYEKLVKLMPN-VLVF 211
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V + + W+ K SN+ + PK GA W D +AIP ++
Sbjct: 212 NSDSPEVPYVQGEVALGMIWNGSAYLGNKENSNIQFIYPKEGAIFWMDNYAIPKKAK--- 268
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA 143
V G + Q+I+F L+ A
Sbjct: 269 -----NVEGAY----QFIDFLLRPENA 286
>gi|422648357|ref|ZP_16711480.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. maculicola str. ES4326]
gi|330961894|gb|EGH62154.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 364
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAMLNYLGLDPNSTKEADYKKAEAKLMAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKSRAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|398925198|ref|ZP_10661743.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398172395|gb|EJM60261.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 362
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK GA+LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLL 272
Query: 107 AIPA 110
A+PA
Sbjct: 273 AVPA 276
>gi|347732884|ref|ZP_08865955.1| potD [Desulfovibrio sp. A2]
gi|347518360|gb|EGY25534.1| potD [Desulfovibrio sp. A2]
Length = 345
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 23/142 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-----------LALLGNQVRLFD 57
W DL PE AG++ + + R+ +G A +V L L VR+FD
Sbjct: 148 WNDLNRPEFAGKVILSDDQRDSMGVALKALGYSVNSTNEAEIKAAYEWLKKLLPAVRVFD 207
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
T + F +V + W+ D A N+ + PK G LW D AIP ++ +
Sbjct: 208 VTASKQAFISEEVAAGLIWNGDAYIAASENKNLVYIYPKEGVPLWVDSLAIPVGAKHKEN 267
Query: 118 QIGGRVRGPFPLIHQWIEFCLQ 139
H++I+F L+
Sbjct: 268 A------------HKFIDFLLR 277
>gi|410453778|ref|ZP_11307722.1| spermidine/putrescine import ABC transporter
spermidine/putrescine-binding protein PotD [Bacillus
bataviensis LMG 21833]
gi|409932824|gb|EKN69780.1| spermidine/putrescine import ABC transporter
spermidine/putrescine-binding protein PotD [Bacillus
bataviensis LMG 21833]
Length = 357
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 79/214 (36%), Gaps = 32/214 (14%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALL 49
+N W DLW P L +I +++ REV+G A I ++ L L
Sbjct: 150 LNGKKITSWNDLWAPSLRNKILLIDGAREVMGMGLNSLGYSLNDTKKAHLIKAKEKLDTL 209
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
V+ + + + + WS D + ++ VVPK G++LW D IP
Sbjct: 210 TPNVKAIVGDEIKMLLANEEASVGLVWSGDASEIMSENEDLDYVVPKEGSNLWFDNMVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSL 163
++ H++I F L Q + ++T K + LK P
Sbjct: 270 KTAK------------NIEAAHKFINFMLDPKVAAQNTEYVGYSTPNK---QALKHMPKE 314
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
K P E+ + E E L + L+ Y L
Sbjct: 315 VVKDERFYPSPELTEKLEVYENLGKRNLAYYNEL 348
>gi|319652982|ref|ZP_08007087.1| spermidine/putrescine ABC transporter [Bacillus sp. 2_A_57_CT2]
gi|317395331|gb|EFV76064.1| spermidine/putrescine ABC transporter [Bacillus sp. 2_A_57_CT2]
Length = 357
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 81/211 (38%), Gaps = 42/211 (19%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNL--------ALL 49
W DLW PEL +I +++ REV+G + + +Q L A++
Sbjct: 158 WNDLWDPELKNQILLIDGAREVMGMGLNSLHYSLNDKNRDHLVEAKQKLDSLTPNIKAIV 217
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G+++R+ + I V WS + N+ V+P+ G++LW D IP
Sbjct: 218 GDEIRMLMEN--------DEAGIGVVWSGTAQELMWEKDNLEYVLPEEGSNLWFDNMVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIA 169
+ + P HQ++ F L A V + +D + I+
Sbjct: 270 KTA-----------KNP-EAAHQFMNFILDPENAAQNTEYVGYSTPNKEALKYMDEETIS 317
Query: 170 G---VPPAEILARCEFLEPLSEATLSDYEWL 197
P E+ AR E E L + L+ Y L
Sbjct: 318 DERFYPDEEMTARLEVYENLGKRMLAYYNEL 348
>gi|418282905|ref|ZP_12895662.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21202]
gi|365168502|gb|EHM59840.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21202]
Length = 357
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 83/214 (38%), Gaps = 32/214 (14%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F WK L+ P+ +I +V+ RE+IG + + +++L L QVR
Sbjct: 155 FDSWKSLYNPKFKNQILLVDGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVR 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + IAV WS P V+ V+PK G++LW D IP ++
Sbjct: 215 GVVGDEITMMLEQNEGNIAVVWSGVAAPLVQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ- 273
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
G + +++ F L Q A + + T K +LL + D +
Sbjct: 274 -------NKEGAY----KFMNFLLDAKNNKQNAEFVGYATPNKAARQLLPKEIKDDHRF- 321
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P E R E + L + LS+Y N +
Sbjct: 322 --YPTKEEQKRLEVYKDLGQEVLSEYNENFLNFK 353
>gi|422654041|ref|ZP_16716794.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. actinidiae str. M302091]
gi|330967077|gb|EGH67337.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 364
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAMLNYLGLSPNSTNEADYKKAEAKLLAIRP-------HVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|238762095|ref|ZP_04623068.1| Putrescine-binding periplasmic protein [Yersinia kristensenii ATCC
33638]
gi|238699823|gb|EEP92567.1| Putrescine-binding periplasmic protein [Yersinia kristensenii ATCC
33638]
Length = 369
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T QA + L L +R F + Y+ G
Sbjct: 176 VSFLDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +AVGW+ D++ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|123441805|ref|YP_001005789.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|420259064|ref|ZP_14761782.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122088766|emb|CAL11571.1| putrescine-binding periplasmic protein precursor [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|404513431|gb|EKA27248.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 369
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T QA + L L +R F + Y+ G
Sbjct: 176 VSFLDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +AVGW+ D++ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|332162254|ref|YP_004298831.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|386307807|ref|YP_006003863.1| putrescine ABC transporter putrescine-binding protein PotF
[Yersinia enterocolitica subsp. palearctica Y11]
gi|418242130|ref|ZP_12868647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433548238|ref|ZP_20504288.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Yersinia enterocolitica IP 10393]
gi|318606319|emb|CBY27817.1| putrescine ABC transporter putrescine-binding protein PotF
[Yersinia enterocolitica subsp. palearctica Y11]
gi|325666484|gb|ADZ43128.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860389|emb|CBX70699.1| putrescine-binding periplasmic protein [Yersinia enterocolitica
W22703]
gi|351778478|gb|EHB20631.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431790798|emb|CCO67328.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Yersinia enterocolitica IP 10393]
Length = 369
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T QA + L L +R F + Y+ G
Sbjct: 176 VSFLDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +AVGW+ D++ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|308048856|ref|YP_003912422.1| extracellular solute-binding protein [Ferrimonas balearica DSM
9799]
gi|307631046|gb|ADN75348.1| extracellular solute-binding protein family 1 [Ferrimonas balearica
DSM 9799]
Length = 364
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 40/194 (20%)
Query: 9 WKDLWLPELAGRI----SMVNSPREVIGTQAAAGRIAVQQN-------------LALLGN 51
W ++ PE+ +I + +N+P E+I AA + + N L +
Sbjct: 156 WDLVFKPEMISKIDCGVAFLNAPSEII--PAAMHYLGMDPNSTNPKDVEPAEELLLKVRP 213
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+ F + ++ GD+ +AVGWS D+L A R + V+P+ G +W DL
Sbjct: 214 YITYFHSSQFINDLANGDICLAVGWSGDILQAADRADEADNGITIEYVIPQEGTLVWFDL 273
Query: 106 WAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
AIP +R HQ+I++ ++ + V + K ++D
Sbjct: 274 MAIPRDAR------------NVDAAHQFIDYLMRPEVMAEISNYVWYANAIPSSKATIDE 321
Query: 166 KLIAG---VPPAEI 176
++ PPAE+
Sbjct: 322 EVTGHPGIYPPAEV 335
>gi|218459052|ref|ZP_03499143.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Rhizobium etli Kim 5]
Length = 199
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 17/110 (15%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
I ++++P++V+ T A V++ L + +R F + Y+ F GD
Sbjct: 7 IYVLDTPKDVMTTALRISALIRNSTKAEDFKKVEELLTAVRPYIRKFHSSEYINAFANGD 66
Query: 70 VWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
+ IA G+S D+L A R + V +P GA +W D+ AIPA ++
Sbjct: 67 ICIAFGYSGDMLQARDRAAEAKNGVEVNYSIPAQGAQMWFDMMAIPADAK 116
>gi|84385476|ref|ZP_00988507.1| Spermidine/putrescine-binding periplasmic protein [Vibrio
splendidus 12B01]
gi|84379456|gb|EAP96308.1| Spermidine/putrescine-binding periplasmic protein [Vibrio
splendidus 12B01]
Length = 344
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 40/212 (18%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI--AVQQNLALLGNQV 53
F+ W DLW PEL G++ M++ REV G I A + L L+ N V
Sbjct: 148 FQSWADLWNPELEGQLMMMDDTREVFHIALRKLGYSGNTTNEKEIDEAYAELLKLMPN-V 206
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS- 112
+F+ + + G+V + + W+ A + +V PK G W D +AI + +
Sbjct: 207 LVFNSDNPGAPYMSGEVGLGMLWNGSAAAAQNEGLPIKLVFPKEGGIGWVDNFAISSGAI 266
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+E H+ I+F L Q +R + T VK E K P+L
Sbjct: 267 NVEAA-------------HKMIDFLLRPEIAEQISRDTGYLTAVKASNEKFKDSPAL--- 310
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ ++ +
Sbjct: 311 ----FPSQEDLDRVEWQAAVGDKTVKYEDYFM 338
>gi|390450397|ref|ZP_10235990.1| extracellular solute-binding protein family 1 [Nitratireductor
aquibiodomus RA22]
gi|389662745|gb|EIM74302.1| extracellular solute-binding protein family 1 [Nitratireductor
aquibiodomus RA22]
Length = 365
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 22/127 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
W ++ PELA + I M++S EV+ T ++ ++ L +
Sbjct: 156 WDVMFTPELAAKFKDCGIYMLDSASEVVRSALIYLGLDPNTPSSDDLAKAEELLLSVRPY 215
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
VR F + Y+ GD+ +A+G+S D+ A R + V +PK GA LW D
Sbjct: 216 VRKFHSSEYINGLANGDICLALGYSGDIFQARDRAAEADQGVTVGYAIPKEGAMLWFDQM 275
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 276 AIPADAK 282
>gi|418021465|ref|ZP_12660549.1| Spermidine/putrescine-binding periplasmic protein [Candidatus
Regiella insecticola R5.15]
gi|347603175|gb|EGY28056.1| Spermidine/putrescine-binding periplasmic protein [Candidatus
Regiella insecticola R5.15]
Length = 379
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T Q A+ L L L +R F + Y+ G
Sbjct: 186 VSFLDAPSEIFATLLHYLGKDANSQLASDYTGSATELLLTLRPSIRYFHSSQYINDLANG 245
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +AVGW+ D++ A R N+A +PK GA + D++A+PA ++
Sbjct: 246 DICVAVGWNGDIVQAANRAKEAKNGVNIAYSIPKEGALVTFDVFAMPADAK 296
>gi|310643170|ref|YP_003947928.1| spermidine/putrescine import ABC transporter
spermidine/putrescine-binding protein potd
[Paenibacillus polymyxa SC2]
gi|309248120|gb|ADO57687.1| Spermidine/putrescine import ABC transporter,
spermidine/putrescine-binding protein PotD
[Paenibacillus polymyxa SC2]
gi|392303966|emb|CCI70329.1| Spermidine/putrescine-binding periplasmic protein 1 SPBP
[Paenibacillus polymyxa M1]
Length = 357
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 50/218 (22%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQAAA--------GRIAVQQNL----------- 46
F W LW P+L + +V+ RE++G + + +QQ L
Sbjct: 155 FHSWDGLWDPKLRNNLLLVDGAREIMGMSLNSLHYSLNDTNKAHLQQALTKLEKLAPNVK 214
Query: 47 ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 106
A++G+++++ + + V WS D + + + VVP G++LW D
Sbjct: 215 AVVGDEIKM--------LLANEEAAAGVVWSGDASEIMDQNDKLDYVVPDEGSNLWFDNI 266
Query: 107 AIP-AASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKG 159
IP A+ ++ H++I F + Q A + ++T K ++LL
Sbjct: 267 VIPKTATHVDAA-------------HKFINFMMQPDVAAQNAEFVGYSTPNKDAKKLLPE 313
Query: 160 KPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
S D + PP+EI + E + L + L+ Y L
Sbjct: 314 DISGDERF---YPPSEITDKLEVYDNLGKRMLAHYNEL 348
>gi|68249097|ref|YP_248209.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae 86-028NP]
gi|260582237|ref|ZP_05850030.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae NT127]
gi|68057296|gb|AAX87549.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae 86-028NP]
gi|260094605|gb|EEW78500.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae NT127]
Length = 350
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 34/185 (18%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A K ++ V PK GA W D +AIP +++
Sbjct: 213 NSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAIPNSAQ--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLDTKLIAG 170
V G + ++I+F L+ A + F+ + LL + + D KL
Sbjct: 270 -----NVEGAY----KFIDFLLRPENAKIVIERMGFSMPNNGAKTLLSAEVANDPKLF-- 318
Query: 171 VPPAE 175
PPAE
Sbjct: 319 -PPAE 322
>gi|395499287|ref|ZP_10430866.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. PAMC 25886]
gi|395793876|ref|ZP_10473221.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. Ag1]
gi|421143690|ref|ZP_15603626.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens BBc6R8]
gi|395341989|gb|EJF73785.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. Ag1]
gi|404505108|gb|EKA19142.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens BBc6R8]
Length = 362
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 213 ITYFHSSKYISDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLL 272
Query: 107 AIPA 110
AIPA
Sbjct: 273 AIPA 276
>gi|148976184|ref|ZP_01812927.1| ABC-type spermidine/putrescine-binding periplasmic protein
[Vibrionales bacterium SWAT-3]
gi|145964579|gb|EDK29833.1| ABC-type spermidine/putrescine-binding periplasmic protein
[Vibrionales bacterium SWAT-3]
Length = 344
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 82/211 (38%), Gaps = 38/211 (18%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQVR 54
F+ W DLW PEL G++ M++ REV G I L L V
Sbjct: 148 FQSWADLWKPELEGQLMMMDDTREVFHIALRKLGYSGNTTNEKEIDEAYAELQKLMPNVL 207
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP-AASR 113
+F+ + + G+V + + W+ A + +V PK G W D +AI A+
Sbjct: 208 VFNSDNPGAPYMSGEVGLGMLWNGSAAAAQNEGLPIKLVFPKEGGIGWVDNFAISFGATN 267
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKL 167
+E H+ I+F L Q +R + T VK E K P+L
Sbjct: 268 VEA-------------AHKMIDFLLRPEIAEQISRDTGYLTAVKASNEKFKDSPAL---- 310
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ ++ +
Sbjct: 311 ---FPSQEDLDRVEWQAAVGDKTVKYEDYFM 338
>gi|254506754|ref|ZP_05118894.1| spermidine/putrescine-binding periplasmic protein [Vibrio
parahaemolyticus 16]
gi|219550335|gb|EED27320.1| spermidine/putrescine-binding periplasmic protein [Vibrio
parahaemolyticus 16]
Length = 344
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 78/201 (38%), Gaps = 26/201 (12%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-----------LALLGNQVRLFD 57
W LW + A ++ +++ R+V G ++ N L L + V L++
Sbjct: 147 WAQLWDAKYAQQVMLIDDIRDVFGMALKLNGHSINSNNEQEIKQAYESLVALKDNVLLYN 206
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+ + + W+ + M+ + V+P+ GA LW D + IP+ S+ +
Sbjct: 207 SDAPQMPYVAGETALGMQWNGNAYQGQAEMAELKFVMPEEGAVLWMDNFTIPSGSQNKA- 265
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGV---PPA 174
L HQ+I F Q + + G+ L +L P
Sbjct: 266 -----------LAHQFIRFMYQPQQQAEIVNSLGYASVTQSGRALLVDELKNNATIFPSV 314
Query: 175 EILARCEFLEPLSEATLSDYE 195
E + + EF+ + TL+ YE
Sbjct: 315 EDIQKGEFINDVGSETLAVYE 335
>gi|423721323|ref|ZP_17695505.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Geobacillus thermoglucosidans TNO-09.020]
gi|383365694|gb|EID42987.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Geobacillus thermoglucosidans TNO-09.020]
Length = 357
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 82/207 (39%), Gaps = 34/207 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQ-NLALLGNQVRLFDR-THYLKVFG 66
W DLW +L +I +V+ REVIG + ++ N L DR T +K
Sbjct: 158 WNDLWDKDLRNQILLVDGAREVIGMGLNSLHYSLNDTNKKHLQEAKEKLDRLTPNVKAI- 216
Query: 67 IGD----------VWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+GD I V WS D + + VVPK G++LW D IP +
Sbjct: 217 VGDEIKMLLVNEEAAIGVVWSGDAAEIIAENDKLDYVVPKEGSNLWFDNMVIPKTA---- 272
Query: 117 KQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLIAG 170
K I G HQ+I F L Q A + ++T + + L + + D +
Sbjct: 273 KNIEGA--------HQFINFMLDPKNAAQNAEYVGYSTPNEKALDYLPKEVTEDKRF--- 321
Query: 171 VPPAEILARCEFLEPLSEATLSDYEWL 197
P E + E E L + L+ Y L
Sbjct: 322 YPDFESVGNLEVYENLGKRMLAYYNEL 348
>gi|329770316|ref|ZP_08261700.1| hypothetical protein HMPREF0433_01464 [Gemella sanguinis M325]
gi|328836740|gb|EGF86394.1| hypothetical protein HMPREF0433_01464 [Gemella sanguinis M325]
Length = 358
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 32/198 (16%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQ-AAAGRIAVQQN----------LALLGNQVR 54
F+ W DLW L I ++ RE++G + GR ++N L LL ++
Sbjct: 155 FEKWDDLWDSRLQNNILAIDGAREMLGLALQSEGRSVNEKNEVNLNLAEKKLELLHPNIK 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + + W++V +S D ++ ++ +PK G +LW D IP +
Sbjct: 215 AINSDEKKMLMINNEAWVSVVFSGDASAIMEENKDMVYAIPKEGTNLWFDNMVIPNTVKN 274
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
E +++I F L Q A+ + + T K +ELL + D +
Sbjct: 275 EDAA------------YKFINFMLRPENAAQNAKFIGYATPNKKAKELLPEDVTSDEQF- 321
Query: 169 AGVPPAEILARCEFLEPL 186
P + L + E E L
Sbjct: 322 --YPDLDSLGKAEVYEAL 337
>gi|37675937|ref|NP_936333.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio vulnificus YJ016]
gi|37200477|dbj|BAC96303.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio vulnificus
YJ016]
Length = 360
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 84/209 (40%), Gaps = 42/209 (20%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQVRLFD 57
W DLW + A ++ +++ R+V G ++ ++L L N V L++
Sbjct: 163 WADLWDKKYAQQVMLIDDIRDVFGMALKLNGYSINTKNEDEIKKAYESLVALKNNVLLYN 222
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+ + + W+ + M + V+P+ GA +W D + IP+ S+ +
Sbjct: 223 SDAPQVPYVSGETSVGMQWNGNAYQGQVEMPELKFVMPEEGAVMWMDNFTIPSGSKHKE- 281
Query: 118 QIGGRVRGPFPLIHQWIEFCLQ------TARALPFNT-----RVKLPEELLKGKPSLDTK 166
L H++I F Q +L + + R LP+E LK P++
Sbjct: 282 -----------LAHKFINFMYQPEHQAEIVNSLGYASATNAGRALLPDE-LKNNPTI--- 326
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYE 195
P + + EF+ + LS YE
Sbjct: 327 ----FPADADVKKGEFINDVGPEALSIYE 351
>gi|407364788|ref|ZP_11111320.1| extracellular solute-binding protein [Pseudomonas mandelii JR-1]
Length = 362
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLL 272
Query: 107 AIPA 110
AIPA
Sbjct: 273 AIPA 276
>gi|418613820|ref|ZP_13176818.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU118]
gi|420198916|ref|ZP_14704600.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM031]
gi|374822486|gb|EHR86507.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU118]
gi|394272602|gb|EJE17052.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM031]
Length = 357
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 84/215 (39%), Gaps = 34/215 (15%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DL+ +L I +V+ RE+IG + +++L L QVR
Sbjct: 155 FDSWGDLYHSQLKNDILLVDGAREIIGMGLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVR 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + +AV WS P V+ ++ V+PK G++LW D IP ++
Sbjct: 215 GIVGDEITMMLQQNEGHVAVVWSGVAAPLVQENTHYNYVIPKEGSNLWFDNMVIPKTAQ- 273
Query: 115 ETKQIGGRVRGPFPLIHQ-------WIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKL 167
+ G F L Q W+ + A R KLP+E+ D +
Sbjct: 274 --NKEGAYKFMNFLLDAQNSAQNTEWVGYATPNKAA-----RSKLPKEVRN-----DHRF 321
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P + R E + L +++LSDY N +
Sbjct: 322 ---YPSKQEQQRLEVYKDLGQSSLSDYNESFLNFK 353
>gi|229590032|ref|YP_002872151.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
fluorescens SBW25]
gi|229361898|emb|CAY48798.1| putrescine ABC transporter, substrate-binding protein [Pseudomonas
fluorescens SBW25]
Length = 362
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 213 ITYFHSSKYISDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLL 272
Query: 107 AIPA 110
AIPA
Sbjct: 273 AIPA 276
>gi|410089930|ref|ZP_11286537.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas viridiflava UASWS0038]
gi|409762797|gb|EKN47796.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas viridiflava UASWS0038]
Length = 364
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAMLNYLGLDPNSTKEADYKKAEAKLMAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|440225582|ref|YP_007332673.1| putative putrescine ABC transporter, substrate-binding protein
[Rhizobium tropici CIAT 899]
gi|440037093|gb|AGB70127.1| putative putrescine ABC transporter, substrate-binding protein
[Rhizobium tropici CIAT 899]
Length = 365
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
VR F + Y+ GD+ +A G+S DVL A R + N+A +P GA +W D+
Sbjct: 216 VRKFHSSEYINALANGDICLAFGYSGDVLQARNRAAEAKNGVNIAYSIPTKGAQMWFDVM 275
Query: 107 AIPA-ASRLETKQI 119
AIPA A +E I
Sbjct: 276 AIPADAPHVEEAHI 289
>gi|312112389|ref|YP_003990705.1| family 1 extracellular solute-binding protein [Geobacillus sp.
Y4.1MC1]
gi|336236840|ref|YP_004589456.1| family 1 extracellular solute-binding protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311217490|gb|ADP76094.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y4.1MC1]
gi|335363695|gb|AEH49375.1| extracellular solute-binding protein family 1 [Geobacillus
thermoglucosidasius C56-YS93]
Length = 357
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 82/207 (39%), Gaps = 34/207 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQ-NLALLGNQVRLFDR-THYLKVFG 66
W DLW +L +I +V+ REVIG + ++ N L DR T +K
Sbjct: 158 WNDLWDKDLRNQILLVDGAREVIGMGLNSLHYSLNDTNKKHLQEAKEKLDRLTPNVKAI- 216
Query: 67 IGD----------VWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+GD I V WS D + + VVPK G++LW D IP +
Sbjct: 217 VGDEIKMLLVNEEAAIGVVWSGDAAEIIAENDKLDYVVPKEGSNLWFDNMVIPKTA---- 272
Query: 117 KQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLIAG 170
K I G HQ+I F L Q A + ++T + + L + + D +
Sbjct: 273 KNIEGA--------HQFINFMLDPKNAAQNAEYVGYSTPNEKALDYLPKEVTEDKRF--- 321
Query: 171 VPPAEILARCEFLEPLSEATLSDYEWL 197
P E + E E L + L+ Y L
Sbjct: 322 YPDFESVGNLEVYENLGKRMLAYYNEL 348
>gi|398865909|ref|ZP_10621415.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398242096|gb|EJN27723.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 362
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEARNGVNIAYAIPKEGSNLWFDLL 272
Query: 107 AIPA 110
AIPA
Sbjct: 273 AIPA 276
>gi|375264908|ref|YP_005022351.1| extracellular solute-binding protein [Vibrio sp. EJY3]
gi|369840232|gb|AEX21376.1| extracellular solute-binding protein [Vibrio sp. EJY3]
Length = 369
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A+GWS DVL A R + +A +PK GA W DL
Sbjct: 221 VTYFHSSQYINDLANGDICVAIGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLM 280
Query: 107 AIPAASR 113
AIP ++
Sbjct: 281 AIPKDAK 287
>gi|163751564|ref|ZP_02158786.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella benthica KT99]
gi|161328572|gb|EDP99725.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella benthica KT99]
Length = 366
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 21/136 (15%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S D+ A R ++ +PK GA+LW D+
Sbjct: 217 VTYFHSSRYIIDLANGDICVAFGYSGDIFQAAARAEEADNGQVISYAIPKEGANLWFDML 276
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTK 166
AIPA ++ V+ H +I + L+ P V L + +D +
Sbjct: 277 AIPADAK--------NVKNA----HTFINYLLRPEVIAPITNYVAYANPNLAAQEFVDKE 324
Query: 167 LIAGV---PPAEILAR 179
++ P EIL R
Sbjct: 325 ILNDTSIYPNEEILKR 340
>gi|293396880|ref|ZP_06641154.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Serratia odorifera DSM 4582]
gi|291420351|gb|EFE93606.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Serratia odorifera DSM 4582]
Length = 369
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
VR F + Y+ GD+ +A+GW+ DV+ A R NVA +PK GA + D+
Sbjct: 219 SVRYFHSSQYINDLANGDICVAIGWAGDVMQASNRAKDAKNGVNVAYSIPKEGALAFFDV 278
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 279 FAMPADAK 286
>gi|218887047|ref|YP_002436368.1| extracellular solute-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758001|gb|ACL08900.1| extracellular solute-binding protein family 1 [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 358
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 23/142 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-----------LALLGNQVRLFD 57
W DL PE AG++ + + R+ +G A +V L L VR+FD
Sbjct: 161 WNDLNRPEFAGKVILSDDQRDSMGVALKALGYSVNSTNEAEIKAAYEWLKKLLPAVRVFD 220
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
T + F +V + W+ D A N+ V P+ G LW D AIP ++ +
Sbjct: 221 VTASKQAFISEEVAAGLIWNGDAYIAASENENLVYVYPREGVPLWVDSLAIPVGAKHKDN 280
Query: 118 QIGGRVRGPFPLIHQWIEFCLQ 139
H++I+F L+
Sbjct: 281 A------------HKFIDFLLR 290
>gi|338738412|ref|YP_004675374.1| putrescine ABC transporter periplasmic-binding protein
[Hyphomicrobium sp. MC1]
gi|337758975|emb|CCB64800.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Hyphomicrobium sp. MC1]
Length = 372
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 22/124 (17%)
Query: 12 LWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRL 55
++ PE+A + I M++SP ++I T+ V+ L + ++
Sbjct: 166 IFKPEIAAKFKDCGIYMLDSPEDIIPVALNYLGLDPNTKNPEDFQKVEDMLLKIRPYIKK 225
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 109
F + Y+ GD +A+GWS D+L A R + +PK G +W D+ AIP
Sbjct: 226 FHSSEYINALANGDACMALGWSGDILQAASRAEEAKNGQVIKYNIPKEGTQMWFDMMAIP 285
Query: 110 AASR 113
A ++
Sbjct: 286 ADAK 289
>gi|120404362|ref|YP_954191.1| extracellular solute-binding protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957180|gb|ABM14185.1| extracellular solute-binding protein, family 1 [Mycobacterium
vanbaalenii PYR-1]
Length = 393
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 33/213 (15%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG----TQAAA----GRIAVQQNLALL-----GNQV 53
K DLW P GR+S+ + ++ +G +Q + +VQ+ + L+ Q+
Sbjct: 189 KTIDDLWDPAFKGRVSLFSDAQDGLGMIMLSQGNSPENPSMESVQKAVDLVREQNDKGQI 248
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
R F Y G+V +A +S DV+ ++ +VP+SGA+ + D IP ++
Sbjct: 249 RRFTGNDYADDLAAGNVAVAQAYSGDVVQLQADNPDLQFIVPESGATTFVDTMVIPYTTQ 308
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVK-------LPEELLKGKPSLDTK 166
+ WI + A + V+ + EEL K P+
Sbjct: 309 NQKA------------AEAWINYVYDRANYAKLVSYVQYVPVLSDMTEELEKIDPAAAAN 356
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLVA 199
+ PPA++LA+ + L++ +Y A
Sbjct: 357 PLIN-PPADVLAKSKGWAALTDEQTQEYNTAYA 388
>gi|395649466|ref|ZP_10437316.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 362
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 213 ITYFHSSKYISDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLL 272
Query: 107 AIPA 110
AIPA
Sbjct: 273 AIPA 276
>gi|104773746|ref|YP_618726.1| spermidine/putrescine ABC transporter substrate-binding protein
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
gi|103422827|emb|CAI97479.1| Spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
Length = 360
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 34/209 (16%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIGTQ-----------AAAGRIAVQQNLALLGNQVRL 55
K W DLW + G+I +V+S R+++G +A A + L +G V+
Sbjct: 158 KSWNDLWKKKYQGQILLVDSARDIMGMSLVSMGYSMNDTNSAHLKAAKAKLDKIGKNVKA 217
Query: 56 FDRTHYLKVFGI-GDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
LK++ + + WI V +S + + + S++ VVP G++LW D IP +
Sbjct: 218 IVADE-LKMYMVQNEAWIGVTYSGEAAMMMDQDSHIHYVVPAQGSNLWFDNIVIPKTCK- 275
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
K+ +++I F L Q A + ++T ++LL D +
Sbjct: 276 -NKEAA----------YKFINFMLEPKNAAQNAEYIGYSTPNTAAQKLLPKSVREDKQF- 323
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYEWL 197
PP + E L + + +Y L
Sbjct: 324 --YPPMSTVKNLEVYRDLPSSKVQEYNDL 350
>gi|269127601|ref|YP_003300971.1| family 1 extracellular solute-binding protein [Thermomonospora
curvata DSM 43183]
gi|268312559|gb|ACY98933.1| extracellular solute-binding protein family 1 [Thermomonospora
curvata DSM 43183]
Length = 416
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 25/118 (21%)
Query: 12 LWLPELAGRISMVNSPREV-------IGT----------QAAAGRIAVQQNLALLGNQVR 54
LW P+ G+I M+ +E+ IG + AA ++ Q++L VR
Sbjct: 209 LWDPKYKGKIGMMADSQELGNFGMFAIGVDPEKSTPDDWRKAAAKLREQKDL------VR 262
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
+ Y GDVWI + WS DV + +V VVP+ G +LW D IP +
Sbjct: 263 KYYNQDYADAIAKGDVWITMAWSGDVYSL--GLEDVKFVVPEEGGTLWTDNMCIPKTA 318
>gi|425066266|ref|ZP_18469386.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida P1059]
gi|404381851|gb|EJZ78316.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida P1059]
Length = 349
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 25/147 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ + + REV T+ + A ++ + L+ N V +F
Sbjct: 153 WADLWKPEYKGKVLLTSDAREVFHIALLLNGKSPNTTKELEIKQAYEKLVKLMPN-VLVF 211
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V + + W+ K SN+ + PK GA W D +AIP ++
Sbjct: 212 NSDSPEVPYVQGEVALGMIWNGSAYLGNKENSNIQFIYPKEGAIFWMDNYAIPKKAK--- 268
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA 143
+ G + Q+I+F L+ A
Sbjct: 269 -----NIEGAY----QFIDFLLRPENA 286
>gi|420241083|ref|ZP_14745247.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF080]
gi|398072841|gb|EJL64038.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF080]
Length = 365
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 21/142 (14%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V+ F+ + Y+ GD I +GWS DVL A R N+ ++PK G +W D
Sbjct: 216 VKTFNSSAYIDELANGDSCITIGWSGDVLQAKTRAEEAKNGVNIEFIIPKEGTYMWFDNL 275
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTK 166
AIPA ++ + H +I + L+ + V+ L + LD +
Sbjct: 276 AIPADAKHVAEA------------HAFINYLLKPEVIAKASNYVQYANGNLASQKFLDKE 323
Query: 167 LIAG---VPPAEILARCEFLEP 185
++ PP +++ + + P
Sbjct: 324 VLENPSVYPPEDVVKKLFTISP 345
>gi|398859600|ref|ZP_10615273.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
gi|398236561|gb|EJN22339.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
Length = 362
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLL 272
Query: 107 AIPA 110
AIPA
Sbjct: 273 AIPA 276
>gi|170289243|ref|YP_001739481.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Thermotoga sp.
RQ2]
gi|170176746|gb|ACB09798.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Thermotoga sp.
RQ2]
Length = 336
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 77/196 (39%), Gaps = 28/196 (14%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
K W +L GR+++++ REV+G T+ +Q + +
Sbjct: 143 KSWSIFDREDLRGRMTLLDDMREVLGAALKYLGYSVNTKNPKELEEAKQVVLRWKKNIAK 202
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAV--KRMSNVAVVVPKSGASLWADLWAIPAASR 113
FD + Y + W+ G++ DV + +PK G +LW D IP ++
Sbjct: 203 FDASSYADGVVSDEYWVVHGYAEDVYQRIPEGEEEYFDFFIPKEGGTLWIDNMVIPKGAK 262
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP 173
L +++I F L+ A + LP ++ + + T+ I +
Sbjct: 263 ------------NVDLAYKFINFILEPENAAKIADYLGLPSPNVEARKYMQTEPIYTI-- 308
Query: 174 AEILARCEFLEPLSEA 189
E L CEF+E + EA
Sbjct: 309 -EDLKNCEFIEDVGEA 323
>gi|406658463|ref|ZP_11066603.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus iniae 9117]
gi|405578678|gb|EKB52792.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus iniae 9117]
Length = 357
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 34/209 (16%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIGTQ-AAAGRIAVQQNLALLGNQVR--LFDRT---- 59
K W+DLW PE I +++ REV+G G +N LG QV+ L D T
Sbjct: 156 KHWEDLWRPEYRNNIMLIDGAREVMGLGLNTFGYSLNSKNKQELG-QVKEHLQDLTPNIK 214
Query: 60 ----HYLKVFGI-GDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+K + I GD I V +S + + N+ VVP+ G++LW D + P +
Sbjct: 215 AIVADEMKGYMIQGDAAIGVTFSGEASEMLDSNKNLHYVVPEEGSNLWFDNFVFPKTMKH 274
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
E + + +I F L Q A + + T +ELL D
Sbjct: 275 EKEA------------YAFINFMLDPKNAAQNAEYIGYATPNNKAKELLPDDIKNDK--- 319
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYEWL 197
A P +I+ + E + L + L Y L
Sbjct: 320 AFYPSQQIINKLEVYDNLGQYWLGYYNDL 348
>gi|429081852|ref|ZP_19144947.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter condimenti 1330]
gi|426549418|emb|CCJ70988.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter condimenti 1330]
Length = 370
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T +A +A L L +R F + Y+ G
Sbjct: 177 VSFLDAPEEIFATVLNYLGKDPNSSKADDYSVAATDLLLKLRPNIRYFHSSQYINDLANG 236
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|359299639|ref|ZP_09185478.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus [parainfluenzae] CCUG 13788]
Length = 346
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 25/163 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW E G++ ++N PREV ++ A A + L + V +F+
Sbjct: 148 WGDLWRDEYKGKLLLMNDPREVFHIALLLDGKSPNSENEAEIKAAYERLQKIVPNVLVFN 207
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+V + + WS A ++ + PK GA LW D + IP + E K
Sbjct: 208 SDSPEMPYLQGEVSVGMQWSGSAHRAKSENPDLKFIFPKEGAVLWMDNYVIPKGA--ENK 265
Query: 118 QIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLK 158
+ H++I+F L ++A+ + +P E +K
Sbjct: 266 EAA----------HKFIDFLLRPESAKEVIETMGFSMPNEGVK 298
>gi|163853417|ref|YP_001641460.1| extracellular solute-binding protein [Methylobacterium extorquens
PA1]
gi|163665022|gb|ABY32389.1| extracellular solute-binding protein family 1 [Methylobacterium
extorquens PA1]
Length = 367
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 17/106 (16%)
Query: 21 ISMVNSPREVI-------GTQAAAGR----IAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
+ +++SP ++I G ++ + R AV L + VR F + Y+ GD
Sbjct: 175 VMLLDSPEDLIPSILPFYGFKSDSKRWDDITAVTDALYKVRGAVRKFHSSEYVNGLANGD 234
Query: 70 VWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 109
V +AVG+S DV+ A KR +A +PK GA +W D +AIP
Sbjct: 235 VCLAVGYSGDVMQAKKRAEESKNGIEIAYFIPKEGALMWFDAFAIP 280
>gi|389876148|ref|YP_006369713.1| PotF [Tistrella mobilis KA081020-065]
gi|388526932|gb|AFK52129.1| PotF [Tistrella mobilis KA081020-065]
Length = 379
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 38/192 (19%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREV-------IGTQAAAGRIA----VQQNLALLGNQ 52
W+ ++ PE+ + +S+++SP E +G ++ V + +
Sbjct: 168 WRLIFDPEVVSKLADCGVSVMDSPDETFPAMLNYLGLDPDGHKVEDVDKVAEAYMKIRPH 227
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLW 106
+R F + Y+ G+V +A+G+S D+L A R + + V+P GA LW D+
Sbjct: 228 IRKFHNSQYINDLANGEVCVAMGYSGDILQARDRAQEADNGNEIVYVIPSEGAQLWFDML 287
Query: 107 AIPAASRLETKQIGGRVRGPFPL-IHQWIEFCLQTARALPFNTRVKLPEELLKGKP--SL 163
AIPA + P P H +I + L+ + V K P S
Sbjct: 288 AIPADA-------------PHPENAHTFINYILEPKVTAAISDYVAYANANAKATPLVSE 334
Query: 164 DTKLIAGVPPAE 175
D + G+ P+E
Sbjct: 335 DVRNDPGIYPSE 346
>gi|418058269|ref|ZP_12696246.1| extracellular solute-binding protein family 1 [Methylobacterium
extorquens DSM 13060]
gi|373568190|gb|EHP94142.1| extracellular solute-binding protein family 1 [Methylobacterium
extorquens DSM 13060]
Length = 367
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 17/106 (16%)
Query: 21 ISMVNSPREVI-------GTQAAAGR----IAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
+ +++SP ++I G ++ + R AV L + VR F + Y+ GD
Sbjct: 175 VMLLDSPEDLIPSILPFYGFKSDSKRWDDITAVTDALYKVRGAVRKFHSSEYVNGLANGD 234
Query: 70 VWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 109
V +AVG+S DV+ A KR +A +PK GA +W D +AIP
Sbjct: 235 VCLAVGYSGDVMQAKKRAEESKNGIEIAYFIPKEGALMWFDAFAIP 280
>gi|242242407|ref|ZP_04796852.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
W23144]
gi|420175104|ref|ZP_14681549.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM061]
gi|420192847|ref|ZP_14698704.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM023]
gi|242234114|gb|EES36426.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
W23144]
gi|394244390|gb|EJD89735.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM061]
gi|394260663|gb|EJE05472.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM023]
Length = 357
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 83/215 (38%), Gaps = 34/215 (15%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DL+ +L I +V+ RE+IG + +++L L QVR
Sbjct: 155 FDSWDDLYHSQLKNDILLVDGAREIIGMGLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVR 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + +AV WS P V+ + V+PK G++LW D IP ++
Sbjct: 215 GIVGDEITMMLQQNEGHVAVVWSGVAAPLVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ- 273
Query: 115 ETKQIGGRVRGPFPLIHQ-------WIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKL 167
+ G F L Q W+ + A R KLP+E+ D +
Sbjct: 274 --NKEGAYKFMNFLLDAQNSAQNTEWVGYATPNKAA-----RSKLPKEVRN-----DHRF 321
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P + R E + L +++LSDY N +
Sbjct: 322 ---YPSKQEQQRLEVYKDLGQSSLSDYNESFLNFK 353
>gi|402304825|ref|ZP_10823889.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sputorum HK 2154]
gi|400377232|gb|EJP30112.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sputorum HK 2154]
Length = 346
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 25/163 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW E G++ ++N PREV ++ A A + L + V +F+
Sbjct: 148 WGDLWRDEYKGKLLLMNDPREVFHIALLLDGKSPNSENEAEIKAAYERLQKIVPNVLVFN 207
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+V + + WS A ++ + PK GA LW D + IP + E K
Sbjct: 208 SDSPEMPYLQGEVSVGMQWSGSAHRAKSENPDLKFIFPKEGAVLWMDNYVIPKGA--ENK 265
Query: 118 QIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLK 158
+ H++I+F L ++A+ + +P E +K
Sbjct: 266 EAA----------HKFIDFLLRPESAKEVIETMGFSMPNEGVK 298
>gi|66048088|ref|YP_237929.1| extracellular solute-binding protein [Pseudomonas syringae pv.
syringae B728a]
gi|63258795|gb|AAY39891.1| extracellular solute-binding protein, family 1 [Pseudomonas
syringae pv. syringae B728a]
Length = 364
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAVLNYLGLDPNSTKEADYKEAEAKLMAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|409396642|ref|ZP_11247622.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
gi|409118824|gb|EKM95215.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
Length = 361
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 37/196 (18%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
W L+ P+ A + I+M++S E+I ++ A ++ L +
Sbjct: 152 WAVLFEPQNAEKLASCGIAMLDSADEMIPAMLNYLGLDPNSENPADYRKAEEKLLAVRPH 211
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
VR F + Y+ G++ +A G+S DV A R +A +PK G +LW D+
Sbjct: 212 VRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDML 271
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTK 166
AIPA + G H +I++ L+ + V LK +D +
Sbjct: 272 AIPADA------------GNVEQAHAFIDYLLRPEVIASVSDYVGYANPNLKAGELMDQE 319
Query: 167 LIAG---VPPAEILAR 179
+ PP ++L R
Sbjct: 320 VRNDPSIYPPQDVLDR 335
>gi|29829151|ref|NP_823785.1| ABC transporter substrate-binding protein [Streptomyces avermitilis
MA-4680]
gi|29606257|dbj|BAC70320.1| putative ABC transporter solute-binding protein [Streptomyces
avermitilis MA-4680]
Length = 396
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 13/121 (10%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-------------TQAAAGRIAVQQNLALLGNQ 52
K DLW +L GR+++++ E T R+ Q + Q
Sbjct: 187 IKHVSDLWASDLKGRVTLLSGLDEAFALLMQGNGVDITRWTADDFHRVCDQVEKHVRSGQ 246
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
+R F Y+K GDV +S DV+ ++ VVP+ GA LWA+ IP +
Sbjct: 247 IRRFTGNDYIKDLSSGDVLACQAYSGDVIQLQADDPDIHFVVPQEGAELWAESLMIPNLA 306
Query: 113 R 113
R
Sbjct: 307 R 307
>gi|110632525|ref|YP_672733.1| extracellular solute-binding protein [Chelativorans sp. BNC1]
gi|110283509|gb|ABG61568.1| extracellular solute-binding protein, family 1 [Chelativorans sp.
BNC1]
Length = 365
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +AVG+S DV A R + +A +PK GA +W D
Sbjct: 215 NIRKFHSSEYINALANGDICVAVGYSGDVFQARDRAAEAGQGVEIAYAIPKEGAQMWFDQ 274
Query: 106 WAIPA 110
AIPA
Sbjct: 275 MAIPA 279
>gi|410692224|ref|YP_003622845.1| Periplasmic ABC transporter polyamine-binding protein potD
[Thiomonas sp. 3As]
gi|294338648|emb|CAZ86977.1| Periplasmic ABC transporter polyamine-binding protein potD
[Thiomonas sp. 3As]
Length = 424
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 14/117 (11%)
Query: 11 DLWLPELAGRISMVNSPREV-------IGTQAAAGRIAVQQNLA--LLGNQ----VRLFD 57
DLW P G + M +P + +G A + + A L+ + VR +
Sbjct: 221 DLWDPAFKGHVGMFKNPTQYGDFGLLKLGIDPATATVEDWKKAAKELMAQRKEGLVRQYY 280
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLWAIPAASR 113
Y+K GD WI++ WS D+ A + ++ ++PK GA W D IP ++
Sbjct: 281 DQSYIKALESGDAWISMAWSGDIYQANTQGYKDLKFIIPKEGAMYWHDNMFIPQGAK 337
>gi|254563346|ref|YP_003070441.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Methylobacterium extorquens DM4]
gi|254270624|emb|CAX26627.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Methylobacterium extorquens DM4]
Length = 366
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 17/106 (16%)
Query: 21 ISMVNSPREVI-------GTQAAAGR----IAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
+ +++SP ++I G ++ + R AV L + VR F + Y+ GD
Sbjct: 174 VMLLDSPEDLIPSILPFYGFKSDSKRWDDITAVTDALYKVRGAVRKFHSSEYVNGLANGD 233
Query: 70 VWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 109
V +AVG+S DV+ A KR +A +PK GA +W D +AIP
Sbjct: 234 VCLAVGYSGDVMQAKKRAEESKNGIEIAYFIPKEGALMWFDAFAIP 279
>gi|163847330|ref|YP_001635374.1| extracellular solute-binding protein [Chloroflexus aurantiacus
J-10-fl]
gi|163668619|gb|ABY34985.1| extracellular solute-binding protein family 1 [Chloroflexus
aurantiacus J-10-fl]
Length = 312
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG----------TQAAAGRIAV-QQNLALLGNQVRLFD 57
W DLW P+LAG+I + PR+ I G++AV ++ A L ++V L
Sbjct: 111 WADLWKPDLAGKIVLWPIPRDTINVLLKSLGYSINTTDPGQLAVARERAAELAHRVTLTQ 170
Query: 58 R-THYLKVFGIGDVWI-AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
+ + + D + A+GW+ D A + N+A ++P G LW D + IP S
Sbjct: 171 EGDEVVTPYLLSDEHVVALGWTYDAFDAQAQNENIAYIIPAEGTILWFDNFVIPTTS 227
>gi|409422830|ref|ZP_11259910.1| periplasmic putrescine-binding protein [Pseudomonas sp. HYS]
Length = 362
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 20/122 (16%)
Query: 5 GFKDWKDLWLPELAGRISM---VNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHY 61
F D D P + + M N+P + +A L L + F + Y
Sbjct: 171 SFMDSADELFPAILNYMGMDPRSNNPEDYKKAEA---------KLLTLRPYITYFHSSKY 221
Query: 62 LKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASR 113
+ GD+ +A G+S DV A R N+A +PK G++LW DL AIP A++R
Sbjct: 222 VSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPSDASNR 281
Query: 114 LE 115
E
Sbjct: 282 KE 283
>gi|374705415|ref|ZP_09712285.1| ABC transporter substrate-binding protein [Pseudomonas sp. S9]
Length = 358
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADL 105
V F + Y+ GD+ +AVG+S D+L + R ++ + VVPK GA LW D+
Sbjct: 208 NVLYFHSSKYVSDLANGDICVAVGFSGDILQSATRAADANNGVHIDYVVPKEGAPLWFDM 267
Query: 106 WAIPAASRLE 115
A+PA S+ E
Sbjct: 268 VAMPADSKNE 277
>gi|239825895|ref|YP_002948519.1| family 1 extracellular solute-binding protein [Geobacillus sp.
WCH70]
gi|239806188|gb|ACS23253.1| extracellular solute-binding protein family 1 [Geobacillus sp.
WCH70]
Length = 357
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 82/207 (39%), Gaps = 34/207 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQ-NLALLGNQVRLFDR-THYLKVFG 66
W DLW +L +I +V+ REVIG + ++ N L DR T +K
Sbjct: 158 WNDLWDKDLRNQILLVDGAREVIGMGLNSLHYSLNDTNKKHLQEAKEKLDRLTPNVKAI- 216
Query: 67 IGD----------VWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+GD I V WS D + + VVPK G++LW D IP +
Sbjct: 217 VGDEIKMLLVNEEAAIGVVWSGDAAGIIAENDKLDYVVPKEGSNLWFDNMVIPKTA---- 272
Query: 117 KQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLIAG 170
K I G HQ+I F L Q A + ++T + + L + + D +
Sbjct: 273 KNIEGA--------HQFINFMLDPKNAAQNAEYVGYSTPNEKALDYLPKEVTEDKRF--- 321
Query: 171 VPPAEILARCEFLEPLSEATLSDYEWL 197
P E + E E L + L+ Y L
Sbjct: 322 YPDFESVGNLEVYENLGKRMLAYYNEL 348
>gi|222525176|ref|YP_002569647.1| family 1 extracellular solute-binding protein [Chloroflexus sp.
Y-400-fl]
gi|222449055|gb|ACM53321.1| extracellular solute-binding protein family 1 [Chloroflexus sp.
Y-400-fl]
Length = 350
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIG----------TQAAAGRIAV-QQNLALLGN 51
E W DLW P+LAG+I + PR+ I G++AV ++ A L +
Sbjct: 143 EQPITRWADLWKPDLAGKIVLWPIPRDTINVLLKSLGYSINTTDPGQLAVARERAAELAH 202
Query: 52 QVRLFDR-THYLKVFGIGDVWI-AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
+V L + + + D + A+GW+ D A + N+A ++P G LW D + IP
Sbjct: 203 RVTLTQEGDEVVTPYLLSDEHVVALGWTYDAFDAQAQNENIAYIIPAEGTILWFDNFVIP 262
Query: 110 AAS 112
S
Sbjct: 263 TTS 265
>gi|407072110|ref|ZP_11102948.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio cyclitrophicus ZF14]
Length = 344
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 81/210 (38%), Gaps = 36/210 (17%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQVR 54
F+ W DLW PEL G++ M++ REV G I L L V
Sbjct: 148 FQSWADLWKPELEGQLMMMDDTREVFHIALRKLGYSGNTTNEKEIDEAYAELKKLMPNVL 207
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+F+ + + G+V + + W+ A + +V PK G W D +AI +
Sbjct: 208 VFNSDNPGSPYMSGEVGLGMLWNGSAAAAQNEGLPIQLVFPKEGGIGWVDNFAISS---- 263
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
G V H+ I+F L Q +R + T VK E K P+L
Sbjct: 264 ------GAVN--VEAAHKMIDFLLRPEIAEQISRDTGYLTAVKASNEKFKDSPAL----- 310
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ ++ +
Sbjct: 311 --FPSQEDLDRVEWQAAVGDKTVKYEDYFM 338
>gi|59711926|ref|YP_204702.1| polyamine transporter binding protein [Vibrio fischeri ES114]
gi|59480027|gb|AAW85814.1| polyamine transporter binding protein [Vibrio fischeri ES114]
Length = 347
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 27/208 (12%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREV-------IGTQAAAGR----IAVQQNLALL 49
MN N W D W + G++ M++ REV +G A A + L L
Sbjct: 142 MNPNELHSWNDFWDEKWQGQLMMMDDSREVFHIALTKLGYSANTTNPEEIKAAYEELKKL 201
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
+ +F+ + G+ + + W+ A + +N+ +V P+ GA W D AIP
Sbjct: 202 MPNILVFNSDFPANPYLAGETSVGMLWNGSAYMAREEGANIQIVWPEKGAIFWMDSLAIP 261
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIA 169
A + K I H+ ++F L+ A + P + P L +
Sbjct: 262 AGA----KNIDAA--------HEMMDFLLRPENAAKIALEIGYPTPVKSAYPLLPKEFAN 309
Query: 170 G---VPPAEILARCEFLEPLSEA-TLSD 193
PP ++ E+ + + EA TL D
Sbjct: 310 DPNIFPPQSVMDSGEWQDEVGEASTLYD 337
>gi|428318683|ref|YP_007116565.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
gi|428242363|gb|AFZ08149.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
Length = 376
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 85/203 (41%), Gaps = 38/203 (18%)
Query: 7 KDWKDLWL--PELAGRISMVNSPREVIG--------TQAAAGRIAVQQ---NLALLGNQV 53
+DW LW ELA R+++ N REV+G + + + V+Q L L +
Sbjct: 176 EDWDYLWQHKQELAKRMTLANDVREVMGAALRMLGYSLNSTNQEQVKQAYEKLVELKPAI 235
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F + GD+ +A+ +SSD + + VVPKSG+SLW D IP +
Sbjct: 236 ASFTTDAWRPQMLTGDLKVAMCYSSDANEVIPDNDKLRYVVPKSGSSLWTDTLVIPKGA- 294
Query: 114 LETKQIGGRVRGPFP-LIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVP 172
P P ++WI F LQ + L E L PS D + +
Sbjct: 295 ------------PNPEAAYKWINFMLQA------DVAASLVERLSFSTPSEDA--FSLLT 334
Query: 173 PAEILARCEFLEPLSEATLSDYE 195
P + E L P SEATL + E
Sbjct: 335 PE--VRENEILFP-SEATLKNCE 354
>gi|398998348|ref|ZP_10701126.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398120775|gb|EJM10428.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 362
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLL 272
Query: 107 AIPA 110
A+PA
Sbjct: 273 AVPA 276
>gi|219871497|ref|YP_002475872.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus parasuis SH0165]
gi|219691701|gb|ACL32924.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus parasuis SH0165]
Length = 349
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ ++N REV T A + A ++ L+ N V +F
Sbjct: 152 WGDLWKPEFKGKVLLMNDSREVFHMALLLDGKSPNTTNADEIKTAYERLTKLVPN-VLVF 210
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A ++ + PK GA +W D + IP ++
Sbjct: 211 NSDSPEMPYLQGEVAIGMQWTGSAYRAKSENPDLKFIFPKEGAVIWMDNYVIPKNAK--N 268
Query: 117 KQIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLKG 159
K+ H++I+F L ++A+ + +P E +K
Sbjct: 269 KEAA----------HKFIDFLLRPESAKTVIETMGFSMPNENVKA 303
>gi|163790907|ref|ZP_02185331.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Carnobacterium
sp. AT7]
gi|159873860|gb|EDP67940.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Carnobacterium
sp. AT7]
Length = 357
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 85/209 (40%), Gaps = 32/209 (15%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIG--TQAAAGRIAVQQNLALLGNQVRLFDRT- 59
E+ + W DLW PEL + +++ RE+IG + + +++ L +L T
Sbjct: 152 EDAIQHWDDLWNPELKNEVMLIDGAREIIGLALDSEGNSLNSKEDDQLAAAAKKLSGLTP 211
Query: 60 -------HYLKVFGIG-DVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 111
+K++ I + +AV +S + + N+ V+P G++LW D + IP
Sbjct: 212 NVKAIVADEIKMYMIQEEASVAVTFSGEASEMLYENENLHYVIPSEGSNLWFDNFVIPKT 271
Query: 112 SRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDT 165
++ F + +I F L Q A + ++T K ++L + + D
Sbjct: 272 AK------------NFEAAYAFINFMLEPENAAQNAEYVGYSTPNKEAMKILPAEITEDE 319
Query: 166 KLIAGVPPAEILARCEFLEPLSEATLSDY 194
+ P E + E E L + Y
Sbjct: 320 QF---YPNEETMKNLEVYEDLGSKYIGVY 345
>gi|381352990|pdb|3TTN|A Chain A, Crystal Structures Of Polyamine Receptors Spud And Spue
From Pseudomonas Aeruginosa
gi|381352991|pdb|3TTN|B Chain B, Crystal Structures Of Polyamine Receptors Spud And Spue
From Pseudomonas Aeruginosa
Length = 340
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ G++ +A G+S DV A R ++ V+PK GA+LW DL
Sbjct: 194 VSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLX 253
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALP-----FNTRVKLPEELLKGKP 161
AIPA ++ P + + + A A+P + V EE+ +
Sbjct: 254 AIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLXDKSVSDSEEVYPPQA 313
Query: 162 SLDTKLIAGVPPAEIL 177
LD ++ V PA++L
Sbjct: 314 VLDKLYVSAVLPAKVL 329
>gi|238795802|ref|ZP_04639315.1| Putrescine-binding periplasmic protein [Yersinia mollaretii ATCC
43969]
gi|238720265|gb|EEQ12068.1| Putrescine-binding periplasmic protein [Yersinia mollaretii ATCC
43969]
Length = 369
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T QA + L L +R F + Y+ G
Sbjct: 176 VSFLDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +AVGW+ D++ A R NVA +PK GA + D++A+P+ ++
Sbjct: 236 DICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAK 286
>gi|238789658|ref|ZP_04633441.1| Putrescine-binding periplasmic protein [Yersinia frederiksenii ATCC
33641]
gi|238722211|gb|EEQ13868.1| Putrescine-binding periplasmic protein [Yersinia frederiksenii ATCC
33641]
Length = 369
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T QA+ L L +R F + Y+ G
Sbjct: 176 VSFLDAPSEIFATVLNYLGKDPNSIQASDYTGPATDLLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +AVGW+ DV+ A R NVA +PK GA + D++A+P+ ++
Sbjct: 236 DICVAVGWAGDVMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAK 286
>gi|429333574|ref|ZP_19214268.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
gi|428761774|gb|EKX83994.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
Length = 361
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 22/127 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
W L+ PE + ++ ++S E+I + AA ++ L L
Sbjct: 152 WATLYEPENLKKLQQCGVAFMDSADELIPSILNYLGLDPNSSNAADYAKAEKRLLELRPY 211
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S DVL A R +A +PK G++LW DL
Sbjct: 212 VTYFHSSKYISDLANGDICVAFGFSGDVLQAANRAREAGNGVKIAYSIPKEGSNLWFDLI 271
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 272 AIPADAK 278
>gi|398840193|ref|ZP_10597431.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398111211|gb|EJM01101.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 362
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLL 272
Query: 107 AIPA 110
AIPA
Sbjct: 273 AIPA 276
>gi|389820015|ref|ZP_10209562.1| spermidine/putrescine-binding periplasmic protein [Planococcus
antarcticus DSM 14505]
gi|388463070|gb|EIM05445.1| spermidine/putrescine-binding periplasmic protein [Planococcus
antarcticus DSM 14505]
Length = 358
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 82/210 (39%), Gaps = 34/210 (16%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQV 53
F+ W DLW P L + +V+S REVIG T R A + L LG V
Sbjct: 155 FESWDDLWDPTLQQEVILVDSAREVIGMGLNSLGYSLNSTDMDELREATDK-LKTLGPNV 213
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ +++ + +A+ WS + ++ VP+ G++LW D IP
Sbjct: 214 KAIIGDEIVEMMRREEAAVALTWSGQAADMMWINEDIDYSVPEEGSNLWFDNMIIP---- 269
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKL 167
+ V G H +I F L Q A + ++T + L+ + + D +
Sbjct: 270 ----KTADNVEGA----HAFINFMLDPEVAAQNADYVGYSTPNEQAITLMDPEVTRDERF 321
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWL 197
PP E+ R E E L L Y L
Sbjct: 322 ---YPPEELRERLEVYENLGLEMLGTYNEL 348
>gi|422673021|ref|ZP_16732383.1| extracellular solute-binding protein [Pseudomonas syringae pv.
aceris str. M302273]
gi|330970757|gb|EGH70823.1| extracellular solute-binding protein [Pseudomonas syringae pv.
aceris str. M302273]
Length = 364
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAVLNYLGLDPNSTKEADYKKAEAKLMAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|399911594|ref|ZP_10779908.1| extracellular solute-binding protein [Halomonas sp. KM-1]
Length = 367
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 9 WKDLWLPELAGR-------ISMVNSPREVIG-----------TQAAAGRIAVQQNLALLG 50
W L+ PE+ ISM++S E++ ++ A A +A +
Sbjct: 156 WALLFDPEITTALRQGGCGISMLDSGDEMLSPAMAYLGLSPLSEETADLEAAGDLIAAVR 215
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 104
+ + F + Y+ GD+ +A G+S D+ A R + ++PK GA+LW D
Sbjct: 216 DNITYFHSSRYISDLANGDICVAAGYSGDIFQAADRAEEAGRDFTIDYIIPKEGAALWFD 275
Query: 105 LWAIPA 110
+ AIPA
Sbjct: 276 MMAIPA 281
>gi|84683820|ref|ZP_01011723.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Maritimibacter alkaliphilus HTCC2654]
gi|84668563|gb|EAQ15030.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Maritimibacter alkaliphilus HTCC2654]
Length = 361
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 42 VQQNLALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVP 95
V++ + + ++ F + Y++ GD+ +AVGWS D+L A R + + VVP
Sbjct: 201 VEEVYSGIAPYIQKFHSSEYIEALANGDICVAVGWSGDILQARDRAAEADNGNVIEYVVP 260
Query: 96 KSGASLWADLWAIP 109
K GA +W D AIP
Sbjct: 261 KEGAQMWFDQMAIP 274
>gi|237802234|ref|ZP_04590695.1| putrescine ABC transporter periplasmic putrescine-binding protein,
partial [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025091|gb|EGI05147.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 342
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 177 FLDSADEMLPAMLNYLGLDPNSTKEADYKKAEAKLMAIRP-------YVTYFHSSKYITD 229
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 230 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSQ 284
>gi|254500570|ref|ZP_05112721.1| Bacterial extracellular solute-binding protein, putative [Labrenzia
alexandrii DFL-11]
gi|222436641|gb|EEE43320.1| Bacterial extracellular solute-binding protein, putative [Labrenzia
alexandrii DFL-11]
Length = 359
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V+ F + Y+ GD+ +AVGWS DVL A R + V +PK GA +W D
Sbjct: 210 VQKFHSSEYINALANGDICLAVGWSGDVLQARDRAAEADNGVTVEYAIPKEGALMWFDQM 269
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 270 AIPADAK 276
>gi|386847416|ref|YP_006265429.1| Spermidine/putrescine-binding periplasmic protein 2 [Actinoplanes
sp. SE50/110]
gi|359834920|gb|AEV83361.1| Spermidine/putrescine-binding periplasmic protein 2 [Actinoplanes
sp. SE50/110]
Length = 416
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Query: 11 DLWLPELAGRISMVNSPREVIG--------TQAAAGRIAVQQNLALLGNQ-----VRLFD 57
DLW P+ G++ M + +E+ A +G +Q L Q VR +
Sbjct: 203 DLWDPQFKGKVGMFSDTQELANFGLLAAGLKPAGSGEAEWKQAAEKLKQQKSAGMVRNYY 262
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLWAIP 109
Y+ G G+VW+ WS D+ V ++ V+P+ G ++W D IP
Sbjct: 263 DQSYVDALGKGEVWLTQAWSGDIFQKNVSDGTDFRFVIPEEGGTIWTDNMTIP 315
>gi|417843859|ref|ZP_12489924.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21127]
gi|341948322|gb|EGT74952.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21127]
Length = 350
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 25/147 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+ I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEAAIGMIWNGSAYLAHKENPSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA 143
V G H++I+F L+ A
Sbjct: 270 -----NVEG----AHKFIDFLLRPENA 287
>gi|419838750|ref|ZP_14362170.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
haemolyticus HK386]
gi|386909978|gb|EIJ74640.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
haemolyticus HK386]
Length = 350
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 25/147 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N V F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+ I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEAAIGMIWNGSAYLAHKENPSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA 143
V G H++I+F L+ A
Sbjct: 270 -----NVEG----AHKFIDFLLRPENA 287
>gi|424069748|ref|ZP_17807192.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|424074540|ref|ZP_17811948.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|407994030|gb|EKG34642.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|407994062|gb|EKG34667.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe037]
Length = 364
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|422300669|ref|ZP_16388180.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas avellanae BPIC 631]
gi|407987082|gb|EKG29964.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas avellanae BPIC 631]
Length = 364
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAMLNYLGLSPNSTNEADYKKAEAKLLAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|398907683|ref|ZP_10654002.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398171118|gb|EJM59030.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 362
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLL 272
Query: 107 AIPA 110
AIPA
Sbjct: 273 AIPA 276
>gi|417003430|ref|ZP_11942493.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Anaerococcus
prevotii ACS-065-V-Col13]
gi|325478622|gb|EGC81734.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 359
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 55/130 (42%), Gaps = 27/130 (20%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN----------------- 45
E+ F WK+LW + G I + RE +G A +++
Sbjct: 152 ESDFSSWKNLWDKKFEGEILSFDGARETLGIGLLANNLSLNTTDPKKLVEVRNELIGFMG 211
Query: 46 --LALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
A+L +++R++ + + + + +S D A++ N++ +PK G+++W
Sbjct: 212 NVKAILADEIRMY--------MALEEANVGITFSGDASSAIESNENLSYTIPKEGSNIWF 263
Query: 104 DLWAIPAASR 113
D IP S+
Sbjct: 264 DTMVIPKTSK 273
>gi|261418972|ref|YP_003252654.1| extracellular solute-binding protein [Geobacillus sp. Y412MC61]
gi|297531063|ref|YP_003672338.1| family 1 extracellular solute-binding protein [Geobacillus sp.
C56-T3]
gi|319765789|ref|YP_004131290.1| extracellular solute-binding protein [Geobacillus sp. Y412MC52]
gi|261375429|gb|ACX78172.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y412MC61]
gi|297254315|gb|ADI27761.1| extracellular solute-binding protein family 1 [Geobacillus sp.
C56-T3]
gi|317110655|gb|ADU93147.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y412MC52]
Length = 357
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 77/206 (37%), Gaps = 32/206 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAA-GRIAVQQNLALLGNQVRLFDRTHYLKVFGI 67
W DLW P+L +I +V+ REV+G + G N A L R DR +
Sbjct: 158 WNDLWNPDLRNQILLVDGAREVMGMALNSLGYSLNDTNKAHLQEAKRKLDRLMPNVKAIV 217
Query: 68 GD----------VWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
GD I V WS D + + VVPK G++LW D IP + K
Sbjct: 218 GDEIKLLLANEEAAIGVVWSGDAAEIIAENDKLDYVVPKEGSNLWFDNMVIPKTA----K 273
Query: 118 QIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLIAGV 171
I G H +I F L Q A + ++T K L + D +
Sbjct: 274 NIEGA--------HAFINFMLDPKHAAQNAEYVGYSTPNKKALAYLPKDIAGDRRF---Y 322
Query: 172 PPAEILARCEFLEPLSEATLSDYEWL 197
P + E E L + L+ Y L
Sbjct: 323 PDLDSAGHLEVYENLGKHMLAYYNEL 348
>gi|387889855|ref|YP_006320153.1| putrescine-binding periplasmic protein [Escherichia blattae DSM
4481]
gi|414592478|ref|ZP_11442128.1| putrescine ABC transporter substrate-binding periplasmic protein
[Escherichia blattae NBRC 105725]
gi|386924688|gb|AFJ47642.1| putrescine-binding periplasmic protein precursor [Escherichia
blattae DSM 4481]
gi|403196547|dbj|GAB79780.1| putrescine ABC transporter substrate-binding periplasmic protein
[Escherichia blattae NBRC 105725]
Length = 369
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 22/127 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVIGT-----------QAAAGRIAVQQNLALLGNQ 52
W ++ PE + ++ +++P E+ T AA A L L
Sbjct: 160 WDLIFKPENIAKLKSCGVAFLDAPSEMYATVLHYLGKDPNSSNAADYNAATDLLLKLRPS 219
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
VR F + Y+ GDV +A+GWS DVL A R S ++A +PK GA + D +
Sbjct: 220 VRYFHSSQYINDLANGDVCVAIGWSGDVLQAANRASEAKNGVHIAYSIPKEGAIGYFDNF 279
Query: 107 AIPAASR 113
AI A ++
Sbjct: 280 AITADAK 286
>gi|289672275|ref|ZP_06493165.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. syringae FF5]
gi|422633838|ref|ZP_16698957.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. pisi str. 1704B]
gi|422668304|ref|ZP_16728162.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440724022|ref|ZP_20904372.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34876]
gi|440728705|ref|ZP_20908910.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34881]
gi|330944393|gb|EGH46414.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. pisi str. 1704B]
gi|330980671|gb|EGH78774.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440358665|gb|ELP96011.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34876]
gi|440360838|gb|ELP98093.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34881]
Length = 364
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|443641720|ref|ZP_21125570.1| Sperimdine/putrescine ABC-type transport system, substrate-binding
protein [Pseudomonas syringae pv. syringae B64]
gi|443281737|gb|ELS40742.1| Sperimdine/putrescine ABC-type transport system, substrate-binding
protein [Pseudomonas syringae pv. syringae B64]
Length = 364
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|222084921|ref|YP_002543450.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter
K84]
gi|221722369|gb|ACM25525.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter
K84]
Length = 374
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ + G+S DVL A R + N++ +PK GA +W D+
Sbjct: 224 NIRKFHSSEYINALANGDICLTFGYSGDVLQARNRAAEAKNGINISYSIPKKGAQMWFDV 283
Query: 106 WAIPA 110
AIPA
Sbjct: 284 MAIPA 288
>gi|71733632|ref|YP_276985.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|71554185|gb|AAZ33396.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. phaseolicola 1448A]
Length = 364
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|398944508|ref|ZP_10671287.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398158081|gb|EJM46442.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 362
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ GD+ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLL 272
Query: 107 AIPA 110
A+PA
Sbjct: 273 AVPA 276
>gi|387886760|ref|YP_006317059.1| putrescine ABC transporter periplasmic protein [Francisella
noatunensis subsp. orientalis str. Toba 04]
gi|386871576|gb|AFJ43583.1| ATP-binding cassette putrescine uptake system, periplasmic protein
[Francisella noatunensis subsp. orientalis str. Toba 04]
Length = 393
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGTQAAAGRIAVQQN---------LALLGN---QVRLFDRTHYLKVFGIG 68
+S+++ P ++ G I N L ++ N ++ FD Y F G
Sbjct: 191 VSLLDEPEQIFGNYFFYHGIDPNTNSKAEYEKAALDIIKNVRPYIKYFDSNKYQNDFTAG 250
Query: 69 DVWIAVGWSSDVLPAVKRMSNV------AVVVPKSGASLWADLWAIPAASR 113
++ + +G+S DV+ +VKR V A V+PK G ++W D+ IP ++
Sbjct: 251 NLCLVMGYSGDVVRSVKRAKTVNPYVTLAYVIPKEGTNIWFDMLMIPKGAK 301
>gi|422586173|ref|ZP_16661192.1| putrescine ABC transporter periplasmic putrescine-binding protein,
partial [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330880486|gb|EGH14635.1| putrescine ABC transporter periplasmic putrescine-binding protein,
partial [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 359
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAMLNYLGLSPNSTNEADYKKAEAKLLAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|302537224|ref|ZP_07289566.1| ABC transporter solute-binding protein [Streptomyces sp. C]
gi|302446119|gb|EFL17935.1| ABC transporter solute-binding protein [Streptomyces sp. C]
Length = 393
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 13/121 (10%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-------------TQAAAGRIAVQQNLALLGNQ 52
K KDLW P+LAG++++ + E T++ R+ Q +
Sbjct: 184 IKSVKDLWHPDLAGKVTLFSGLDESFSLLMQGNGTDVTRWTESDFHRMCDQVEDLVRKKH 243
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
+R F Y G GDV +S D + ++ VVP+ G LWA+ +P +
Sbjct: 244 IRRFTGNDYTSDLGKGDVLACQAYSGDAIQLRADNPDIEFVVPEEGGELWAESLLVPNLA 303
Query: 113 R 113
R
Sbjct: 304 R 304
>gi|257877440|ref|ZP_05657093.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
gi|257811606|gb|EEV40426.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
Length = 357
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 40/215 (18%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------------TQAAAGRI-AVQQNL-ALL 49
W DLW PELA I +++ REV+G Q A ++ + N+ A++
Sbjct: 158 WDDLWKPELANSIMLIDGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTMTPNIKAIV 217
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
++++++ + +AV +S + + ++ V+P G++LW D IP
Sbjct: 218 ADEIKMYMANE--------EASVAVTFSGEAADMMYENEHIHYVIPSEGSNLWFDNMVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKPSLDTKL 167
S+ E+ G + ++ + E Q A + ++T + LL + + D +
Sbjct: 270 KTSQNES--------GAYAFLNFMLEPENAAQNAEYIGYSTPNQAAMALLPDEITEDEQF 321
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P E++ E E L L Y L L+
Sbjct: 322 ---YPSDELMEHLEVYENLGAEYLGIYNDLFLELK 353
>gi|399519023|ref|ZP_10759831.1| putrescine transport system substrate-binding protein [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112847|emb|CCH36389.1| putrescine transport system substrate-binding protein [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 363
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 20/94 (21%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
V F + Y+ G++ IA G+S DVL A R +A V+PK GA+LW D+
Sbjct: 214 VTYFHSSKYIGDLANGNICIAAGFSGDVLQAADRADEAGKGIEIAYVIPKEGANLWFDMM 273
Query: 107 AIPA-ASRLETKQIGGRVRGPFPLIHQWIEFCLQ 139
AIPA A+ +E H +I F L+
Sbjct: 274 AIPADAANVEQA-------------HAFINFLLE 294
>gi|167856022|ref|ZP_02478767.1| hypothetical protein HPS_02738 [Haemophilus parasuis 29755]
gi|167852861|gb|EDS24130.1| hypothetical protein HPS_02738 [Haemophilus parasuis 29755]
Length = 349
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ ++N REV T A + A ++ L+ N V +F
Sbjct: 152 WGDLWKPEFKGKVLLMNDSREVFHIALLLDGKSPNTTNADEIKTAYERLTKLVPN-VLVF 210
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V I + W+ A ++ + PK GA +W D + IP ++
Sbjct: 211 NSDSPEMPYLQGEVAIGMQWTGSAYRAKSENPDLKFIFPKEGAVIWMDNYVIPKNAK--N 268
Query: 117 KQIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLKG 159
K+ H++I+F L ++A+ + +P E +K
Sbjct: 269 KEAA----------HKFIDFLLRPESAKMVIETMGFSMPNENVKA 303
>gi|422608005|ref|ZP_16679996.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. mori str. 301020]
gi|330891638|gb|EGH24299.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. mori str. 301020]
Length = 364
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAVLNYMGLDPNSTKEADYKKAEAKLMAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|357026312|ref|ZP_09088415.1| family 1 extracellular solute-binding protein [Mesorhizobium
amorphae CCNWGS0123]
gi|355541823|gb|EHH10996.1| family 1 extracellular solute-binding protein [Mesorhizobium
amorphae CCNWGS0123]
Length = 365
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 106
+R F + Y+ GD+ +AVGWS DV A K+ + VPK GA +W D
Sbjct: 216 IRKFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYAVPKEGAQMWFDQM 275
Query: 107 AIPA 110
AIPA
Sbjct: 276 AIPA 279
>gi|423128300|ref|ZP_17115979.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5250]
gi|376393656|gb|EHT06312.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5250]
Length = 370
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 23/138 (16%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIH--QWIEFCLQTARALPFNTRVKLPEELLKGKP 161
+A+P A ++ E Q + P + H + + +LP L E ++ P
Sbjct: 280 FAMPADAKNKDEAYQFLNYLMRPDVIAHISDHVYYANGNKASLP------LVSEEIRNNP 333
Query: 162 SLDTKLIAGVPPAEILAR 179
++ PPA++ A+
Sbjct: 334 AI-------YPPADVFAK 344
>gi|421725684|ref|ZP_16164869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca M5al]
gi|410373478|gb|EKP28174.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca M5al]
Length = 370
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 23/138 (16%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIH--QWIEFCLQTARALPFNTRVKLPEELLKGKP 161
+A+P A ++ E Q + P + H + + +LP L E ++ P
Sbjct: 280 FAMPADAKNKDEAYQFLNYLMRPDVIAHISDHVYYANGNKASLP------LVSEEIRNNP 333
Query: 162 SLDTKLIAGVPPAEILAR 179
++ PPA++ A+
Sbjct: 334 AI-------YPPADVFAK 344
>gi|257483767|ref|ZP_05637808.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|422596916|ref|ZP_16671194.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|422682743|ref|ZP_16741007.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|330987211|gb|EGH85314.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|331012081|gb|EGH92137.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 364
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAVLNYMGLDPNSTKEADYKKAEAKLMAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|398381287|ref|ZP_10539397.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
AP16]
gi|397719592|gb|EJK80159.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
AP16]
Length = 365
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ + G+S DVL A R + N++ +PK GA +W D+
Sbjct: 215 NIRKFHSSEYINALANGDICLTFGYSGDVLQARNRAAEAKNGINISYSIPKKGAQMWFDV 274
Query: 106 WAIPA 110
AIPA
Sbjct: 275 MAIPA 279
>gi|241889938|ref|ZP_04777236.1| spermidine/putrescine-binding periplasmic protein PotD [Gemella
haemolysans ATCC 10379]
gi|241863560|gb|EER67944.1| spermidine/putrescine-binding periplasmic protein PotD [Gemella
haemolysans ATCC 10379]
Length = 359
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 11/121 (9%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGT--QAAAGRIA---------VQQNLALLGNQVR 54
F+ W DLW L I +++ RE++G Q+ + ++ L LL ++
Sbjct: 155 FEKWNDLWDARLENNILLIDGAREMMGIALQSEGNSVNDTNEVNLNLAEKKLELLHPNIK 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + + W++V +S D ++ N+ +PK G +LW D IP S+
Sbjct: 215 AINSDEKKMLMINNEAWVSVVFSGDAKSIMEENENMVYALPKEGTNLWFDNIVIPKTSKN 274
Query: 115 E 115
E
Sbjct: 275 E 275
>gi|218532276|ref|YP_002423092.1| family 1 extracellular solute-binding protein [Methylobacterium
extorquens CM4]
gi|218524579|gb|ACK85164.1| extracellular solute-binding protein family 1 [Methylobacterium
extorquens CM4]
Length = 367
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 17/106 (16%)
Query: 21 ISMVNSPREVI-------GTQAAAGR----IAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
+ +++SP ++I G ++ + R AV L + VR F + Y+ GD
Sbjct: 175 VMLLDSPEDLIPSILPFYGFKSDSKRWDDITAVTDALYKVRGAVRKFHSSEYVNGLANGD 234
Query: 70 VWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 109
V +AVG+S DV+ A KR +A +PK GA +W D +A+P
Sbjct: 235 VCLAVGYSGDVMQAKKRAEESKNGIEIAYFIPKEGALMWFDAFAVP 280
>gi|417840447|ref|ZP_12486581.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M19107]
gi|341948206|gb|EGT74838.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M19107]
Length = 350
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 25/147 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N + F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEGDIKTAYERLEKLLPN-IATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+ I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEAAIGMIWNGSAYLAQKENPSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA 143
V G H++I+F L+ A
Sbjct: 270 -----NVEG----AHKFIDFLLRPENA 287
>gi|417891784|ref|ZP_12535841.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21200]
gi|341851070|gb|EGS91999.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21200]
Length = 357
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 32/214 (14%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F WK L+ P+ +I +V+ RE+IG + + +++L L QVR
Sbjct: 155 FDSWKSLYNPKFKNQILLVDGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVR 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + IAV WS P V+ V+PK G++LW D IP ++
Sbjct: 215 GVVGDEITMMLEQNEGNIAVFWSGVAAPLVQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ- 273
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
G + +++ F L Q + + T K +LL + D +
Sbjct: 274 -------NKEGAY----KFMNFLLDAKNNKQNTEFVGYATPNKAARQLLPKEIKDDHRF- 321
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P E R E + L + LS+Y N +
Sbjct: 322 --YPTKEEQKRLEVYKDLGQEVLSEYNENFLNFK 353
>gi|46578512|ref|YP_009320.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Desulfovibrio vulgaris str. Hildenborough]
gi|387151995|ref|YP_005700931.1| extracellular solute-binding protein [Desulfovibrio vulgaris RCH1]
gi|46447923|gb|AAS94579.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Desulfovibrio vulgaris str. Hildenborough]
gi|311232439|gb|ADP85293.1| extracellular solute-binding protein family 1 [Desulfovibrio
vulgaris RCH1]
Length = 345
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 23/142 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-----------LALLGNQVRLFD 57
W DL+ PE G + + + R+ G A +V L L VR+FD
Sbjct: 148 WNDLFRPEFKGGVILSDDLRDTFGIALKALGYSVNSTSEAEIKAAYEWLLKLKPSVRVFD 207
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
T + F +V + W+ D A+ ++A V PK G LW D AIP
Sbjct: 208 VTATKQAFIAEEVKGGMSWNGDAFIAMNENPDLAFVYPKEGLPLWVDSLAIP-------- 259
Query: 118 QIGGRVRGPFPLIHQWIEFCLQ 139
IG + H++I+F L+
Sbjct: 260 -IGAEHKDN---AHKFIDFLLR 277
>gi|386826294|ref|ZP_10113401.1| spermidine/putrescine-binding periplasmic protein [Beggiatoa alba
B18LD]
gi|386427178|gb|EIJ41006.1| spermidine/putrescine-binding periplasmic protein [Beggiatoa alba
B18LD]
Length = 369
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 109
F + Y+ GD+ +AVGWS DVL A R + V VPK G +W D+ AIP
Sbjct: 223 FHSSEYINALANGDICVAVGWSGDVLQAADRAAEANKGVKVEYSVPKEGTIMWVDMMAIP 282
Query: 110 AASR 113
++
Sbjct: 283 KDAK 286
>gi|335035434|ref|ZP_08528775.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium sp. ATCC 31749]
gi|333793201|gb|EGL64557.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium sp. ATCC 31749]
Length = 365
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V+ F+ + Y+ GD I++GWS D+L A R V V+PK G +W D +
Sbjct: 216 VKTFNSSPYINDLANGDTCISIGWSGDILQAKTRAEEAKNGVEVNYVIPKEGTYIWMDSF 275
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 276 AIPADAK 282
>gi|120603905|ref|YP_968305.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4]
gi|120564134|gb|ABM29878.1| extracellular solute-binding protein, family 1 [Desulfovibrio
vulgaris DP4]
Length = 345
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 23/142 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-----------LALLGNQVRLFD 57
W DL+ PE G + + + R+ G A +V L L VR+FD
Sbjct: 148 WNDLFRPEFKGGVILSDDLRDTFGIALKALGYSVNSTSEAEIKAAYEWLLKLKPSVRVFD 207
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
T + F +V + W+ D A+ ++A V PK G LW D AIP
Sbjct: 208 VTATKQAFIAEEVKGGMSWNGDAFIAMNENPDLAFVYPKEGLPLWVDSLAIP-------- 259
Query: 118 QIGGRVRGPFPLIHQWIEFCLQ 139
IG + H++I+F L+
Sbjct: 260 -IGAEHKDN---AHKFIDFLLR 277
>gi|418328747|ref|ZP_12939849.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
14.1.R1.SE]
gi|365231674|gb|EHM72701.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
14.1.R1.SE]
Length = 357
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 83/215 (38%), Gaps = 34/215 (15%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DL+ +L I +V+ RE+IG + +++L L QVR
Sbjct: 155 FDSWGDLYHSQLKNDILLVDGAREIIGMGLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVR 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + +AV WS P V+ + V+PK G++LW D IP ++
Sbjct: 215 GIVGDEITMMLQQNEGHVAVVWSGVAAPLVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ- 273
Query: 115 ETKQIGGRVRGPFPLIHQ-------WIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKL 167
+ G F L Q W+ + A R KLP+E+ D +
Sbjct: 274 --NKEGAYKFMNFLLDAQNSAQNTEWVGYATPNKAA-----RSKLPKEVRN-----DHRF 321
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P + R E + L +++LSDY N +
Sbjct: 322 ---YPSKQEQQRLEVYKDLGQSSLSDYNESFLNFK 353
>gi|170722071|ref|YP_001749759.1| extracellular solute-binding protein [Pseudomonas putida W619]
gi|169760074|gb|ACA73390.1| extracellular solute-binding protein family 1 [Pseudomonas putida
W619]
Length = 362
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 70/184 (38%), Gaps = 27/184 (14%)
Query: 5 GFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D P + + M PR ++ A + +L L + F + Y+
Sbjct: 171 AFMDSPDELFPAMLNYLGM--DPR----SEKPADYAKAEAHLLELRPYITYFHSSKYVSD 224
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLETKQ 118
GD+ IA G+S DV A R +A +PK G++LW DL AIP + +
Sbjct: 225 LANGDICIAFGYSGDVFQAANRSVEAKNGVKIAYSIPKEGSNLWFDLLAIPKDASNPEQA 284
Query: 119 IGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG---VPPAE 175
+ +I + L+ + V L K +D L+ PP E
Sbjct: 285 LA------------FINYLLEPQVIAKVSATVGYANANLDAKAYMDESLVNNPEIYPPQE 332
Query: 176 ILAR 179
+L +
Sbjct: 333 VLDK 336
>gi|416022126|ref|ZP_11567366.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|422403034|ref|ZP_16480093.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|320331741|gb|EFW87679.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330872512|gb|EGH06661.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
Length = 364
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|416013841|ref|ZP_11561773.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. B076]
gi|320326259|gb|EFW82312.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. B076]
Length = 364
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|383814371|ref|ZP_09969792.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia sp. M24T3]
gi|383296781|gb|EIC85094.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia sp. M24T3]
Length = 368
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +AVGW+ DV+ A R N+A +PK GA + D+
Sbjct: 218 SIRYFHSSQYINDLANGDICVAVGWAGDVIQASNRAKEAKNGVNIAYSIPKEGALAFFDV 277
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 278 FAMPADAK 285
>gi|357417210|ref|YP_004930230.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
spadix BD-a59]
gi|355334788|gb|AER56189.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
spadix BD-a59]
Length = 381
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 21/137 (15%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADL 105
+ F + Y+ GD + VGWS DV+ A R +A +PK GA LW D+
Sbjct: 231 SISQFHSSSYIDAMANGDTCLVVGWSGDVIQARDRAEEAGNGVKIAYSIPKEGAPLWFDM 290
Query: 106 WAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
AIP +R + +I + L + + P + K K +D
Sbjct: 291 LAIPKDARNVDNA------------YAYINYLLDPQVMANNSNFISYPNAVPKAKELMDE 338
Query: 166 KLIAG---VPPAEILAR 179
++ + PP E+ A+
Sbjct: 339 QITSDPTIYPPPEVAAK 355
>gi|416124466|ref|ZP_11595462.1| bacterial extracellular solute-binding family protein
[Staphylococcus epidermidis FRI909]
gi|418634606|ref|ZP_13196999.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU129]
gi|420177479|ref|ZP_14683815.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM057]
gi|420180221|ref|ZP_14686476.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM053]
gi|420189697|ref|ZP_14695665.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM037]
gi|420204050|ref|ZP_14709610.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM015]
gi|319401576|gb|EFV89786.1| bacterial extracellular solute-binding family protein
[Staphylococcus epidermidis FRI909]
gi|374836829|gb|EHS00406.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU129]
gi|394247863|gb|EJD93105.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM057]
gi|394251260|gb|EJD96359.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM053]
gi|394261032|gb|EJE05834.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM037]
gi|394274064|gb|EJE18489.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM015]
Length = 357
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 83/215 (38%), Gaps = 34/215 (15%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DL+ +L I +V+ RE+IG + +++L L QVR
Sbjct: 155 FDSWGDLYHSQLKNDILLVDGAREIIGMGLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVR 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + +AV WS P V+ + V+PK G++LW D IP ++
Sbjct: 215 GIVGDEITMMLQQNEGHVAVVWSGVAAPLVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ- 273
Query: 115 ETKQIGGRVRGPFPLIHQ-------WIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKL 167
+ G F L Q W+ + A R KLP+E+ D +
Sbjct: 274 --NKEGAYKFMNFLLDAQNSAQNTEWVGYATPNKAA-----RSKLPKEVRN-----DHRF 321
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P + R E + L +++LSDY N +
Sbjct: 322 ---YPSKQEQQRLEVYKDLGQSSLSDYNESFLNFK 353
>gi|296103163|ref|YP_003613309.1| putrescine transporter periplasmic-binding component [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057622|gb|ADF62360.1| putrescine transporter periplasmic-binding component [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 370
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 23/138 (16%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIH--QWIEFCLQTARALPFNTRVKLPEELLKGKP 161
+A+P A ++ E Q + P + H + + +LP L E ++ P
Sbjct: 280 FAMPADAKNKDEAYQFLNYLMRPEVIAHISDHVYYANGNKASLP------LISEEIRNNP 333
Query: 162 SLDTKLIAGVPPAEILAR 179
++ PPA++ A+
Sbjct: 334 AI-------YPPADVFAK 344
>gi|289626089|ref|ZP_06459043.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289651117|ref|ZP_06482460.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. 2250]
gi|422584131|ref|ZP_16659245.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330868952|gb|EGH03661.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 364
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAVLNYMGLDPNSTKEADYKKAEAKLMAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|114705308|ref|ZP_01438216.1| putrescine-binding periplasmic protein [Fulvimarina pelagi
HTCC2506]
gi|114540093|gb|EAU43213.1| putrescine-binding periplasmic protein [Fulvimarina pelagi
HTCC2506]
Length = 365
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F+ + Y+ GD+ +A GWS D+L + R + V+PK GA +W D
Sbjct: 215 HIRKFNSSEYITALANGDICMAHGWSGDILQSRDRAKEAGQGVEIQYVIPKEGAVIWVDN 274
Query: 106 WAIPA 110
AIPA
Sbjct: 275 MAIPA 279
>gi|374336217|ref|YP_005092904.1| putrescine ABC transporter periplasmic-binding protein [Oceanimonas
sp. GK1]
gi|372985904|gb|AEY02154.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Oceanimonas sp. GK1]
Length = 368
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADL 105
+ F + Y+ GD+ +AVGWS D+L A R VA +PK GA +W D+
Sbjct: 218 HITYFHSSKYINDLANGDICVAVGWSGDILQARDRADEAERGVKVAYRIPKEGALMWVDM 277
Query: 106 WAIPAASR 113
IP +R
Sbjct: 278 LTIPKDAR 285
>gi|15887954|ref|NP_353635.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium fabrum str. C58]
gi|15155556|gb|AAK86420.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium fabrum str. C58]
Length = 365
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V+ F+ + Y+ GD I++GWS D+L A R V V+PK G +W D +
Sbjct: 216 VKTFNSSPYINDLANGDTCISIGWSGDILQAKTRAEEAKNGVEVNYVIPKEGTYIWMDSF 275
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 276 AIPADAK 282
>gi|28872418|ref|NP_795037.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato str. DC3000]
gi|28855673|gb|AAO58732.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 374
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 5 GFKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLK 63
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 173 AFLDSADEMLPAMLNYLGLDPNSTKEADYKKAEAKLMAIRP-------YVTYFHSSKYIT 225
Query: 64 VFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A PK G +LW D+ AIPA S+
Sbjct: 226 DLANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSTPKEGGNLWFDMLAIPADSK 281
>gi|260772830|ref|ZP_05881746.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio metschnikovii CIP 69.14]
gi|260611969|gb|EEX37172.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio metschnikovii CIP 69.14]
Length = 345
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 36/210 (17%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRI-------------AVQQNLA 47
++++ +W DLW + G++ +++ REV A ++ A Q L
Sbjct: 141 LDKSALTNWNDLWDAKWRGQLMLMDDAREVF--HMALSKLGYSPNSTNPEEIEAAYQELT 198
Query: 48 LLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 107
L V +F+ F G+V + + W+ A + +N+ ++ P+ GA W D A
Sbjct: 199 KLMPNVLVFNSDFPANPFLAGEVSLGMLWNGSAYMARQEGANIEIIWPEKGAIFWMDSIA 258
Query: 108 IPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKP 161
IPA ++ H+ I+F L+ A + + T VK +LL +
Sbjct: 259 IPAGAK------------NIEAAHKMIDFLLRPENAAKIALEIGYPTPVKTAHKLLPAEF 306
Query: 162 SLDTKLIAGVPPAEILARCEFLEPLSEATL 191
D + PP ++ E+ + + EA++
Sbjct: 307 VNDPNIF---PPQSVMESGEWQDDVGEASI 333
>gi|260914211|ref|ZP_05920684.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Pasteurella dagmatis ATCC
43325]
gi|260631844|gb|EEX50022.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Pasteurella dagmatis ATCC
43325]
Length = 348
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVR 54
F+ W DLW P+ G + M++ PRE+ TQ + + L L +
Sbjct: 148 FQSWADLWSPDFKGTLQMLDDPRELFNIALLKMGKDPNTQDPEVLKSAYEELLKLRPNIL 207
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
F+ + F G+ + + W+ A + V +V PK G LW D AIP+ ++
Sbjct: 208 SFNSDNPASSFISGEAELGLLWNGSARIAKNEGAKVDMVYPKEGTILWVDNLAIPSTAK 266
>gi|205372303|ref|ZP_03225117.1| extracellular solute-binding protein [Bacillus coahuilensis m4-4]
Length = 356
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIG--TQAAAGRIAVQQNLALLGNQVRLFDR 58
M E F W DLW P L I +V+ REV+G + + + L+ + +L
Sbjct: 149 MVEGEFTSWDDLWDPSLKNEILLVDGAREVMGFALNSLGYSLNDTNHTHLIEAKEKLDTL 208
Query: 59 THYLKVFGIGD----------VWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 108
T +K +GD +AV WS + + ++ +P+ G++LW D I
Sbjct: 209 TPNIKAI-VGDEIKILMANEEASVAVVWSGEAADMMWENEDLTYAIPEEGSNLWFDNMVI 267
Query: 109 PAASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPS 162
P ++ V G HQ++ F L Q A + ++T K +LL +
Sbjct: 268 PKTAQ--------NVEGA----HQFMNFMLDPEVAAQNADYVGYSTPNKAALDLLPEETV 315
Query: 163 LDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
D + P E+ + E L + L+ Y L
Sbjct: 316 EDERF---YPGEELSEKLEVYNNLGQEMLAYYNEL 347
>gi|218709468|ref|YP_002417089.1| spermidine/putrescine-binding periplasmic protein [Vibrio
splendidus LGP32]
gi|218322487|emb|CAV18644.1| Spermidine/putrescine-binding periplasmic protein precursor [Vibrio
splendidus LGP32]
Length = 344
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 36/210 (17%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQ----AAAGRIAVQQNLALLGNQVR------- 54
F+ W DLW PEL G++ M++ REV +G ++ + ++R
Sbjct: 148 FQSWADLWKPELEGQLMMMDDTREVFHIALRKLGYSGNTTNEKEIDEAYAELRKLMPNVL 207
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+F+ + + G+V + + W+ A + +V PK G W D +AI +
Sbjct: 208 VFNSDNPGAPYMSGEVGLGMLWNGSAAAAQNEGLPIKLVFPKEGGIGWVDNFAISS---- 263
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
G V H+ I+F L Q +R + T VK E K P+L
Sbjct: 264 ------GAVN--VEAAHKMIDFLLRPEIAEQISRDTGYLTAVKASNEKFKDSPAL----- 310
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ ++ +
Sbjct: 311 --FPSQEDLDRVEWQAAVGDKTVKYEDYFM 338
>gi|294497048|ref|YP_003560748.1| spermidine/putrescine import ABC transporter
spermidine/putrescine-binding protein PotD [Bacillus
megaterium QM B1551]
gi|294346985|gb|ADE67314.1| spermidine/putrescine import ABC transporter,
spermidine/putrescine-binding protein PotD [Bacillus
megaterium QM B1551]
Length = 357
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 34/209 (16%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQ-NLALLGNQVRLFDR-THYLKV 64
K W DLW P+L +I + + REV+G + ++ N A L R D T +K
Sbjct: 156 KSWDDLWDPKLKNQILLADGAREVMGMGLNSLNYSLNDTNKAHLQEAKRKLDTLTPNVKA 215
Query: 65 FGIGD----------VWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+GD I V WS D + + VVP+ G++LW D IP ++
Sbjct: 216 I-VGDEIKMLLANEEAAIGVVWSGDASEIMSENDKLNYVVPEEGSNLWFDNMVIPKTAK- 273
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
V G H+++ F L Q A + ++T K + L + + D +
Sbjct: 274 -------NVEGA----HKFMNFMLDPKHAAQNAEYVGYSTPNKQALDYLPKEVAEDERF- 321
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYEWL 197
P E+ + E L + L+ Y L
Sbjct: 322 --YPEEELTKKLEVYNNLGKRMLAYYNEL 348
>gi|257867366|ref|ZP_05647019.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC30]
gi|257873697|ref|ZP_05653350.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC10]
gi|257801422|gb|EEV30352.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC30]
gi|257807861|gb|EEV36683.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC10]
Length = 357
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIG-----------------TQAAAGRI-AV 42
+E W DLW PELA I +++ REV+G Q A ++ +
Sbjct: 150 FDEGEITQWDDLWKPELANSIMLIDGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTM 209
Query: 43 QQNL-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASL 101
N+ A++ ++++++ + +AV +S + + ++ V+P G++L
Sbjct: 210 TPNIKAIVADEIKMYMANE--------EASVAVTFSGEAADMMYENEHIHYVIPSEGSNL 261
Query: 102 WADLWAIPAASRLETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKG 159
W D IP S+ E G + ++ + E Q A + ++T + LL
Sbjct: 262 WFDNMVIPKTSQNEA--------GAYAFLNFMLEPENAAQNAEYIGYSTPNQAAMALLPD 313
Query: 160 KPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
+ + D + P E++ E E L L Y L L+
Sbjct: 314 EITEDEQF---YPSDELMEHLEVYENLGAEYLGIYNDLFLELK 353
>gi|119719819|ref|YP_920314.1| extracellular solute-binding protein [Thermofilum pendens Hrk 5]
gi|119524939|gb|ABL78311.1| extracellular solute-binding protein, family 1 [Thermofilum pendens
Hrk 5]
Length = 360
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 67/164 (40%), Gaps = 28/164 (17%)
Query: 12 LWLPELAGRISMVNSPREVIGTQAAAGRIAV--------QQNLALLGNQVRL----FDRT 59
++LP G++SM+ EV+ I + Q+ + LL Q + +
Sbjct: 165 VFLPRHKGKVSMLEEFLEVVNAAKLYLGIPLNDWSEESKQRIIELLREQRDFLAGYYGAS 224
Query: 60 HYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 119
Y+ GD+ A WS DV+ A +V V+PK GA +W D IP +R
Sbjct: 225 VYIPALAKGDLHAAHAWSGDVVQAQSENKSVEYVLPKEGAFVWIDFMVIPVNARSPD--- 281
Query: 120 GGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPE----ELLKG 159
L ++WI F L A A ++ P ELL+G
Sbjct: 282 ---------LAYEWINFLLDPAVAAKNSSYTYYPSPVKRELLEG 316
>gi|222147628|ref|YP_002548585.1| ABC transporter substrate binding protein (putrescine)
[Agrobacterium vitis S4]
gi|221734616|gb|ACM35579.1| ABC transporter substrate binding protein (putrescine)
[Agrobacterium vitis S4]
Length = 371
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWA 107
+ F+ + YL GD+ +GWS DV+ A KR +A V+PK G +W D A
Sbjct: 223 KTFNSSSYLNDLANGDICATIGWSGDVIQAKKRAEEAKNGVEIAYVIPKEGTYMWFDNLA 282
Query: 108 IPAASR 113
IPA ++
Sbjct: 283 IPADAK 288
>gi|238794852|ref|ZP_04638452.1| Putrescine-binding periplasmic protein [Yersinia intermedia ATCC
29909]
gi|238725795|gb|EEQ17349.1| Putrescine-binding periplasmic protein [Yersinia intermedia ATCC
29909]
Length = 369
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T QA + L L +R F + Y+ G
Sbjct: 176 VSFLDAPAEIFATVLNYLGKDPNSLQATDYTGPATELLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +AVGW+ D++ A R NVA +PK GA + D++A+P+ ++
Sbjct: 236 DICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAK 286
>gi|238753457|ref|ZP_04614820.1| Putrescine-binding periplasmic protein [Yersinia ruckeri ATCC
29473]
gi|238708410|gb|EEQ00765.1| Putrescine-binding periplasmic protein [Yersinia ruckeri ATCC
29473]
Length = 369
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT----------QAAAGRI--AVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T + AG + + L L +R F + Y+ G
Sbjct: 176 VSFLDAPSEIFATVLNYQGKDPNSSNAGDYTGSATELLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +AVGW+ DV+ A R NVA +PK GA + D++A+P ++
Sbjct: 236 DICVAVGWAGDVMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAK 286
>gi|27367812|ref|NP_763339.1| ABC transporter periplasmic spermidine putrescine-binding protein
potD [Vibrio vulnificus CMCP6]
gi|27359385|gb|AAO08329.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Vibrio vulnificus CMCP6]
Length = 360
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 84/209 (40%), Gaps = 42/209 (20%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQVRLFD 57
W DLW + A ++ +++ R+V G ++ ++L L N V L++
Sbjct: 163 WADLWDKKYAQQVMLIDDIRDVFGMALKLNGYSINTKNEDEIKKAYESLVALKNNVLLYN 222
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+ + + W+ + M + V+P+ GA +W D + IP+ S+ +
Sbjct: 223 SDAPQVPYVSGETSVGMQWNGNAYQGQVEMPELKFVMPEEGAVMWMDNFTIPSGSKHKE- 281
Query: 118 QIGGRVRGPFPLIHQWIEFCLQ------TARALPFNT-----RVKLPEELLKGKPSLDTK 166
L H++I F Q +L + + R LP+E LK P++
Sbjct: 282 -----------LAHKFINFMYQPEHQAEIVNSLGYASATNAGRALLPDE-LKNNPTI--- 326
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYE 195
P + + EF+ + L+ YE
Sbjct: 327 ----FPADADVKKGEFINDVGPEALAIYE 351
>gi|24372851|ref|NP_716893.1| ABC-type putrescine uptake system substrate-binding component PotF
[Shewanella oneidensis MR-1]
gi|24346959|gb|AAN54338.1| ABC-type putrescine uptake system substrate-binding component PotF
[Shewanella oneidensis MR-1]
Length = 367
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 37/144 (25%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S DV A R + + +PK GA+LW D+
Sbjct: 218 VTYFHSSRYISDLANGDICVAYGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDML 277
Query: 107 AIPA-ASRLETKQIGGRVRGPFPLIHQWIEFCLQ----------TARALPFNTRVKLPEE 155
AIPA A+ +E H+ I + L+ A A P + L +E
Sbjct: 278 AIPADATNVENA-------------HKLINYLLRPEVIAPISNYVAYANPNDLAQPLVDE 324
Query: 156 LLKGKPSLDTKLIAGVPPAEILAR 179
++ P++ PP E+L +
Sbjct: 325 AIRNDPAI-------YPPKEVLDK 341
>gi|335357864|ref|ZP_08549734.1| spermidine/putrescine-binding protein [Lactobacillus animalis KCTC
3501]
Length = 357
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 30/213 (14%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQ-AAAGRIAVQQNLALLGNQVRLFDR------ 58
FK W DLW P+L +I ++ RE +G A+ GR +N A L R +++
Sbjct: 155 FKTWNDLWDPQLKNKIMFIDGAREFMGIGLASMGRSLNSKNDADLD---RAYNKLKALTP 211
Query: 59 ------THYLKVFGIG-DVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 111
+ +K + + +AV +S + +++ S++ V+P+ G +LW D IP
Sbjct: 212 NAKAIVSDEIKTYMANEESSVAVTFSGEAADMMEKNSHLHYVIPEGGTNLWFDNLVIPKT 271
Query: 112 SRLETKQIGGRVRGPFPLIHQWIE--FCLQTARALPFNTRVKLPEELLKGKPSLDTKLIA 169
++ +G + I+ ++ Q + ++T K LK P T
Sbjct: 272 AK--------NKQGAYEFINFMLDPKNAAQNTEYIGYSTPNKAA---LKYLPKAITSNKE 320
Query: 170 GVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P A + + E E L L Y L L+
Sbjct: 321 FYPSAARIKQMEIYEDLGPKYLEKYNDLFLELK 353
>gi|116513745|ref|YP_812651.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|385815365|ref|YP_005851756.1| Spermidine and putrescine periplasmatic ABC transporter
[Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|418035487|ref|ZP_12673944.1| hypothetical protein LDBUL1519_00644 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|116093060|gb|ABJ58213.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|325125402|gb|ADY84732.1| Spermidine and putrescine periplasmatic ABC transporter
[Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|354690476|gb|EHE90424.1| hypothetical protein LDBUL1519_00644 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 360
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIGTQ-----------AAAGRIAVQQNLALLGNQVRL 55
K W DLW + G+I +V+S R+++G +A A + L +G V+
Sbjct: 158 KSWNDLWKKKYQGQILLVDSARDIMGMSLVSMGYSMNDTNSAHLKAAKAKLDKIGKNVKA 217
Query: 56 FDRTHYLKVFGI-GDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
LK++ + + WI V +S + + + S++ VVP G++LW D IP +
Sbjct: 218 IVADE-LKMYMVQNEAWIGVTYSGEAAMMMDQDSHIHYVVPAQGSNLWFDNIVIPKTCK 275
>gi|258423602|ref|ZP_05686492.1| ABC transporter extracellular binding protein [Staphylococcus
aureus A9635]
gi|418308093|ref|ZP_12919750.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21194]
gi|418559168|ref|ZP_13123714.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21252]
gi|418888895|ref|ZP_13443031.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1524]
gi|257846303|gb|EEV70327.1| ABC transporter extracellular binding protein [Staphylococcus
aureus A9635]
gi|365241826|gb|EHM82560.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21194]
gi|371975459|gb|EHO92753.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21252]
gi|377754405|gb|EHT78314.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1524]
Length = 357
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 32/214 (14%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F WK L+ P+ +I +V+ RE+IG + + +++L L QVR
Sbjct: 155 FDSWKSLYNPKFKNQILLVDGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVR 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + IAV WS P V+ V+PK G++LW D IP ++
Sbjct: 215 GVVGDEITMMLEQNEGNIAVVWSGVAAPLVQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ- 273
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
G + +++ F L Q + + T K +LL + D +
Sbjct: 274 -------NKEGAY----KFMNFLLDAKNNKQNTEFVGYATPNKAARQLLPKEIKDDHRF- 321
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P E R E + L + LS+Y N +
Sbjct: 322 --YPTKEEQKRLEVYKDLGQEVLSEYNENFLNFK 353
>gi|407789271|ref|ZP_11136373.1| polyamine transport protein [Gallaecimonas xiamenensis 3-C-1]
gi|407207249|gb|EKE77192.1| polyamine transport protein [Gallaecimonas xiamenensis 3-C-1]
Length = 416
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 21 ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
+S +++P E++ ++ A + L+ + V + + Y+ GD
Sbjct: 224 VSFLDAPSEILPAALNYLGLNPNSEDPADYAKAEAMLSKVAPYVTYYHSSKYIDDLANGD 283
Query: 70 VWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 109
+ IA+G+S DVL A R V+ V+PK GA +W D+ AIP
Sbjct: 284 ICIAIGFSGDVLQAATRADEAKNGVQVSYVIPKEGAGMWFDMMAIP 329
>gi|344343930|ref|ZP_08774796.1| extracellular solute-binding protein family 1 [Marichromatium
purpuratum 984]
gi|343804541|gb|EGV22441.1| extracellular solute-binding protein family 1 [Marichromatium
purpuratum 984]
Length = 369
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 79/197 (40%), Gaps = 39/197 (19%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVIGTQAA-----------AGRIAVQQNLALLGNQ 52
W ++ P++A R I++++ P EV A A A + + +
Sbjct: 160 WALVFDPQIAARLAGCGIALLDDPTEVFSAALAYLGKDPNSLERADLDAAAELIKGVYPH 219
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+R F + Y+ GD+ IA G+S DVL A +R V +P+ GA++W D+
Sbjct: 220 IRYFHSSQYISDLANGDLCIAHGYSGDVLQAQERADEAGKGVEVIYRIPREGAAMWTDVM 279
Query: 107 AIPAASRLETKQIGGRVRGPFP-LIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
AIP + P P H +I LQ A + V L+ +D
Sbjct: 280 AIPRDA-------------PNPEAAHAFIAHLLQPAVIAAVSDYVYYANPNLEATALVDA 326
Query: 166 KLIAG---VPPAEILAR 179
L PPAE+ AR
Sbjct: 327 ALREDPGIYPPAEVKAR 343
>gi|126668738|ref|ZP_01739687.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinobacter sp. ELB17]
gi|126626775|gb|EAZ97423.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinobacter sp. ELB17]
Length = 360
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 22/123 (17%)
Query: 9 WKDLWLPELAGRIS-----MVNSPREVIGTQ--------AAAGRIAVQQNLALLGN---Q 52
W L+ P+ +++ +++SP EV+ + + R +++ L+
Sbjct: 151 WDMLFDPDTVAKLADCGVVIMDSPTEVMSSALNYLGLDPHSEDRADLEKGSELMMGVRPH 210
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+R F + Y+ GD+ I VG+S D+L A R S N+A +P+ GA + D+
Sbjct: 211 IRYFHSSQYINDLANGDICITVGYSGDILQARDRASEAGQGINIAYTIPREGAVIGFDML 270
Query: 107 AIP 109
AIP
Sbjct: 271 AIP 273
>gi|342903319|ref|ZP_08725130.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21621]
gi|341955423|gb|EGT81879.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21621]
Length = 350
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 30/154 (19%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N + F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-IATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+ I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEAAIGMIWNGSAYLAHKENPSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV 150
V G H++I+F L+ P N++V
Sbjct: 270 -----NVEG----AHKFIDFLLR-----PENSKV 289
>gi|417841023|ref|ZP_12487130.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M19501]
gi|341950118|gb|EGT76711.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M19501]
Length = 350
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 30/154 (19%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N + F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-IATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+ I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEAAIGMIWNGSAYLAHKENPSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV 150
V G H++I+F L+ P N++V
Sbjct: 270 -----NVEG----AHKFIDFLLR-----PENSKV 289
>gi|213971986|ref|ZP_03400083.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato T1]
gi|301384876|ref|ZP_07233294.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato Max13]
gi|302062784|ref|ZP_07254325.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato K40]
gi|302133837|ref|ZP_07259827.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213923248|gb|EEB56846.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato T1]
Length = 364
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAMLNYLGLDPNSTKEADYKKAEAKLMAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSTPKEGGNLWFDMLAIPADSK 281
>gi|448236906|ref|YP_007400964.1| spermidine/putrescine ABC importer substrate-binding protein
[Geobacillus sp. GHH01]
gi|445205748|gb|AGE21213.1| spermidine/putrescine ABC importer substrate-binding protein
[Geobacillus sp. GHH01]
Length = 357
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 76/206 (36%), Gaps = 32/206 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAA-GRIAVQQNLALLGNQVRLFDRTHYLKVFGI 67
W DLW P L +I +V+ REV+G + G N A L R DR +
Sbjct: 158 WNDLWDPSLRNQILLVDGAREVMGMALNSLGYSLNDTNKAHLQEAKRKLDRLMPNVKAIV 217
Query: 68 GD----------VWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
GD I V WS D + + VVPK G++LW D IP + K
Sbjct: 218 GDEIKLLLADEEAAIGVVWSGDAAEIIAENDKLDYVVPKEGSNLWFDNMVIPKTA----K 273
Query: 118 QIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLIAGV 171
I G H +I F L Q A + ++T K L + D +
Sbjct: 274 NIEG--------AHAFINFMLDPKHAAQNAEYVGYSTPNKKALRYLPKDIAGDRRF---Y 322
Query: 172 PPAEILARCEFLEPLSEATLSDYEWL 197
P + E E L + L+ Y L
Sbjct: 323 PDLDSAGHLEVYENLGKHMLAYYNEL 348
>gi|262275521|ref|ZP_06053331.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Grimontia hollisae CIP 101886]
gi|262220766|gb|EEY72081.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Grimontia hollisae CIP 101886]
Length = 343
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 80/206 (38%), Gaps = 36/206 (17%)
Query: 2 NENGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLG 50
N F W DLW PEL G+I +++ REV G +I + L L
Sbjct: 143 NPEDFDSWADLWNPELKGQIMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYEELKKLM 202
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
V +F+ + + G+V + + W+ A + + +V PK G W D AIP
Sbjct: 203 PNVLVFNSDNPANPYLSGEVGLGMLWNGSAAAAQREGLPIELVWPKEGGIFWVDSLAIPK 262
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARA------LPFNTRVKLPEELLKGKPSLD 164
++ V H+ I+F L+ A + T V+ K P+L
Sbjct: 263 NAK--------NVEA----AHKMIDFLLRPEIAARISADTGYLTGVEKSNAKYKDNPTL- 309
Query: 165 TKLIAGVPPAEILARCEFLEPLSEAT 190
PP E L R E+ + + E T
Sbjct: 310 ------FPPQEDLDRGEWQDAVGELT 329
>gi|114048491|ref|YP_739041.1| extracellular solute-binding protein [Shewanella sp. MR-7]
gi|113889933|gb|ABI43984.1| extracellular solute-binding protein, family 1 [Shewanella sp.
MR-7]
Length = 387
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 23/137 (16%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S DV A R + + +PK GA+LW D+
Sbjct: 238 VTYFHSSRYISDLANGDICVAFGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDML 297
Query: 107 AIPA-ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
AIPA A+ +E H+ I + L+ P + V +P +D
Sbjct: 298 AIPADAANVENA-------------HKLINYLLRPEVIAPISNYVAYANPNDPAQPLVDE 344
Query: 166 KLI---AGVPPAEILAR 179
+ A PP E+L +
Sbjct: 345 AIRNDPAIYPPKEVLDK 361
>gi|417845005|ref|ZP_12491038.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21639]
gi|341955897|gb|EGT82342.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21639]
Length = 350
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 25/147 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ M + REV T + A ++ LL N + F
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-IATF 212
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+ I + W+ A K ++ V PK GA W D +AIP ++
Sbjct: 213 NSDSPEVPYVQGEAAIGMIWNGSAYLAHKENPSLQFVYPKEGAIFWMDNYAIPTTAK--- 269
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARA 143
V G H++I+F L+ A
Sbjct: 270 -----NVEG----AHKFIDFLLRPENA 287
>gi|422658420|ref|ZP_16720854.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M302278]
gi|331017047|gb|EGH97103.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M302278]
Length = 364
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F + Y+
Sbjct: 174 FLDSADEMLPAMLNYLGLDPNSTKEADYKKAEAKLMAIRP-------YVTYFHSSKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSTPKEGGNLWFDMLAIPADSK 281
>gi|325568827|ref|ZP_08145120.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus casseliflavus
ATCC 12755]
gi|420263774|ref|ZP_14766410.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus sp. C1]
gi|325157865|gb|EGC70021.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus casseliflavus
ATCC 12755]
gi|394769216|gb|EJF49079.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus sp. C1]
Length = 357
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIG-----------------TQAAAGRI-AV 42
+E W DLW PELA I +++ REV+G Q A ++ +
Sbjct: 150 FDEGEITQWDDLWKPELANSIMLIDGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTM 209
Query: 43 QQNL-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASL 101
N+ A++ ++++++ + +AV +S + + ++ V+P G++L
Sbjct: 210 TPNIKAIVADEIKMYMANE--------EASVAVTFSGEAADMMYENEHIHYVIPSEGSNL 261
Query: 102 WADLWAIPAASRLETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKG 159
W D IP S+ E G + ++ + E Q A + ++T + LL
Sbjct: 262 WFDNMVIPKTSQNEA--------GAYAFLNFMLEPENAAQNAEYIGYSTPNQEAMALLPD 313
Query: 160 KPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
+ + D + P E++ E E L L Y L L+
Sbjct: 314 EITEDEQF---YPSDELMEHLEVYENLGAEYLGIYNDLFLELK 353
>gi|157375543|ref|YP_001474143.1| putrescine-binding periplasmic protein [Shewanella sediminis
HAW-EB3]
gi|157317917|gb|ABV37015.1| putrescine-binding periplasmic protein precursor [Shewanella
sediminis HAW-EB3]
Length = 362
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 17/110 (15%)
Query: 21 ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
++MV++P EV+ +Q A V+++L + + F + Y+ G+
Sbjct: 170 VAMVDAPSEVVSAMLKYLGKNPNSQDLADLKLVEEHLLKIRPYITYFHSSSYVTDLASGN 229
Query: 70 VWIAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAASR 113
+ +A+GWS DV A R NV V+P+ GA WAD + I + S+
Sbjct: 230 ICLAMGWSGDVFMAANRAIEAKNGINVNYVIPREGAQGWADTFNITSDSK 279
>gi|113971253|ref|YP_735046.1| extracellular solute-binding protein [Shewanella sp. MR-4]
gi|117921535|ref|YP_870727.1| extracellular solute-binding protein [Shewanella sp. ANA-3]
gi|113885937|gb|ABI39989.1| extracellular solute-binding protein, family 1 [Shewanella sp.
MR-4]
gi|117613867|gb|ABK49321.1| extracellular solute-binding protein, family 1 [Shewanella sp.
ANA-3]
Length = 387
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 23/137 (16%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S DV A R + + +PK GA+LW D+
Sbjct: 238 VTYFHSSRYISDLANGDICVAFGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDML 297
Query: 107 AIPA-ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
AIPA A+ +E H+ I + L+ P + V +P +D
Sbjct: 298 AIPADAANVENA-------------HKLINYLLRPEVIAPISNYVAYANPNDPAQPLVDE 344
Query: 166 KLI---AGVPPAEILAR 179
+ A PP E+L +
Sbjct: 345 AIRNDPAIYPPKEVLDK 361
>gi|398853858|ref|ZP_10610447.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398238126|gb|EJN23862.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 365
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A+G+S D+ A R + N+A VPK G +LW D+
Sbjct: 216 VTYFHSSKYIGDLANGDICVAIGFSGDIFQAKNRAAEAKKGVNIAYTVPKEGGALWFDML 275
Query: 107 AIPAAS 112
AIP S
Sbjct: 276 AIPKDS 281
>gi|386818476|ref|ZP_10105694.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
gi|386423052|gb|EIJ36887.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
Length = 352
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 29/197 (14%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRIAV-QQNLALL 49
++++ K W DLWL + GR+ + + REV G I + + L+ L
Sbjct: 147 VDKSQVKRWADLWLKQWKGRLLLTDDMREVFHMALLVNGHSGDTNNPEEIKLAYEKLSTL 206
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
V++ + + F G+V I + W+ ++ + + ++ + P+ G ++W D + IP
Sbjct: 207 MPGVKVVSGSPSAE-FLSGNVDIGLIWNGEITISKEEKPSLEYIYPEEGVNVWIDSFVIP 265
Query: 110 A-ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLI 168
A A+ ++ HQ+I++ L+ A + LK + LD KL
Sbjct: 266 ARATNVDNA-------------HQFIDYMLRPEVAARCVQELGYATPSLKARELLDAKLR 312
Query: 169 AG---VPPAEILARCEF 182
PPAE+LA EF
Sbjct: 313 NNPVIFPPAEVLADAEF 329
>gi|418362030|ref|ZP_12962674.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|356686665|gb|EHI51258.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida 01-B526]
Length = 353
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S D+L A R N+A +PK G +LW D+
Sbjct: 204 VTYFHSSKYIGDLANGDICVAAGFSGDILQAAARADEAGKGINIAYSIPKEGGNLWFDMM 263
Query: 107 AIPA 110
AIPA
Sbjct: 264 AIPA 267
>gi|302556323|ref|ZP_07308665.1| ABC transporter solute-binding protein [Streptomyces
viridochromogenes DSM 40736]
gi|302473941|gb|EFL37034.1| ABC transporter solute-binding protein [Streptomyces
viridochromogenes DSM 40736]
Length = 395
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
Query: 10 KDLWLPELAGRISMVNSPREVIGTQAAAGRIAV-------------QQNLALLGNQVRLF 56
DLW +L GR+++++ E + + Q + Q+R F
Sbjct: 190 SDLWASDLKGRVTLLSGMDEAFALLMQGNGVDITDWKADDFHTVCDQVEEQVSRGQIRRF 249
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
YLK GDV +S DV+ +V VVP++GA LWA+ IP +R +T
Sbjct: 250 TGNDYLKDLSSGDVLACQAYSGDVIQLQADDPDVEFVVPEAGAELWAESLMIPNLARHKT 309
Query: 117 K 117
Sbjct: 310 N 310
>gi|145297278|ref|YP_001140119.1| ABC-type putrescine transporter periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida A449]
gi|142850050|gb|ABO88371.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida A449]
Length = 361
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S D+L A R N+A +PK G +LW D+
Sbjct: 212 VTYFHSSKYIGDLANGDICVAAGFSGDILQAAARADEAGKGINIAYSIPKEGGNLWFDMM 271
Query: 107 AIPA 110
AIPA
Sbjct: 272 AIPA 275
>gi|418464540|ref|ZP_13035479.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans RhAA1]
gi|359756495|gb|EHK90652.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans RhAA1]
Length = 348
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 11/121 (9%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRI-----------AVQQNLALLGNQ 52
N W DLW PE G++ + + REV R A + L L
Sbjct: 147 NKITSWSDLWNPEYKGKVLLTSDAREVFHVALLLDRKSPNTTNEDEIKAAYERLEKLLPN 206
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + G+V + + W+ A + N+ V PK GA W D +AIP ++
Sbjct: 207 VAVFNSDSPEVPYVQGEVALGMIWNGSAYMAHRENENIQFVYPKEGAIFWMDNYAIPKSA 266
Query: 113 R 113
+
Sbjct: 267 K 267
>gi|320158082|ref|YP_004190460.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio vulnificus MO6-24/O]
gi|319933394|gb|ADV88257.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio vulnificus MO6-24/O]
Length = 344
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 84/209 (40%), Gaps = 42/209 (20%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQVRLFD 57
W DLW + A ++ +++ R+V G ++ ++L L N V L++
Sbjct: 147 WADLWDKKYAQQVMLIDDIRDVFGMALKLNGYSINTKNEDEIKKAYESLVALKNNVLLYN 206
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+ + + W+ + M + V+P+ GA +W D + IP+ S+ +
Sbjct: 207 SDAPQVPYVSGETSVGMQWNGNAYQGQVEMPELKFVMPEEGAVMWMDNFTIPSGSKHKE- 265
Query: 118 QIGGRVRGPFPLIHQWIEFCLQ------TARALPFNT-----RVKLPEELLKGKPSLDTK 166
L H++I F Q +L + + R LP+E LK P++
Sbjct: 266 -----------LAHKFINFMYQPEHQAEIVNSLGYASATNAGRALLPDE-LKNNPTI--- 310
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYE 195
P + + EF+ + L+ YE
Sbjct: 311 ----FPADADVKKGEFINDVGPEALAIYE 335
>gi|375007599|ref|YP_004981232.1| spermidine/putrescine-binding periplasmic protein [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359286448|gb|AEV18132.1| Spermidine/putrescine-binding periplasmic protein [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 357
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAA-GRIAVQQNLALLGNQVRLFDRTHYLKVFGI 67
W DLW P L +I +V+ REV+G + G N A L R DR +
Sbjct: 158 WNDLWDPNLRNQILLVDGAREVMGMALNSLGYSLNDTNKAHLQEAKRKLDRLMPNVKAIV 217
Query: 68 GD----------VWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
GD I V WS D + + VVPK G++LW D IP + K
Sbjct: 218 GDEIKLLLANEEAAIGVVWSGDAAEIISENDKLDYVVPKEGSNLWFDNMVIPKTA----K 273
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARA 143
I G H +I F L A
Sbjct: 274 NIEG--------AHAFINFMLDPKHA 291
>gi|389690758|ref|ZP_10179651.1| spermidine/putrescine-binding periplasmic protein [Microvirga sp.
WSM3557]
gi|388589001|gb|EIM29290.1| spermidine/putrescine-binding periplasmic protein [Microvirga sp.
WSM3557]
Length = 361
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
++ F + Y+ GD+ +AVG+S D++ A R V V+P+ GA +W D
Sbjct: 211 NIQKFHSSEYINALANGDICVAVGYSGDMIQAKNRAEEAKNGVEVGYVIPREGALMWFDS 270
Query: 106 WAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
+AIPA ++ + H++I F ++ A + V L K +D
Sbjct: 271 FAIPADAKNVAEA------------HEFINFMMKPEIAAMNSNFVSYASGNLAAKQHIDK 318
Query: 166 KLIA--GVPPAE 175
++ G+ P E
Sbjct: 319 AILDNPGIYPDE 330
>gi|260914643|ref|ZP_05921109.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Pasteurella dagmatis ATCC
43325]
gi|260631242|gb|EEX49427.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Pasteurella dagmatis ATCC
43325]
Length = 342
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ + + REV TQ + A + + L+ N V +F
Sbjct: 146 WADLWKPEYKGKVLLTSDAREVFHLALLLNGKSPNTTQENEIKDAYNKLVELMPN-VLVF 204
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+ + G+V + + W+ A K ++ + PK GA W D +AIP ++
Sbjct: 205 NSDSPEVPYVQGEVSLGMIWNGSAYLATKENPSIQFIYPKEGAIFWMDNYAIPKSA---- 260
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV--KLPEELLKG--KPSLDTKLIAGVP 172
K I G +++I+F L+ A R+ +P E +K P L + I P
Sbjct: 261 KNIEGA--------YKFIDFLLRPENAKIVIERMGFSMPNEGVKKLLSPELVSNPIL-FP 311
Query: 173 PAE 175
PAE
Sbjct: 312 PAE 314
>gi|86145991|ref|ZP_01064318.1| Spermidine/putrescine-binding periplasmic protein [Vibrio sp.
MED222]
gi|85836196|gb|EAQ54327.1| Spermidine/putrescine-binding periplasmic protein [Vibrio sp.
MED222]
Length = 344
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 38/211 (18%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQ----AAAGRIAVQQNLALLGNQVR------- 54
F+ W DLW PEL G++ M++ REV +G ++ + ++R
Sbjct: 148 FQSWADLWKPELEGQLMMMDDTREVFHIALRKLGYSGNTTNEKEIDEAYAELRKLMPNVL 207
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS-R 113
+F+ + + G+V + + W+ A + +V PK G W D +AI + +
Sbjct: 208 VFNSDNPGAPYMSGEVGLGMLWNGSAAAAQNEGLPIKLVFPKEGGIGWVDNFAISSGAIN 267
Query: 114 LETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKL 167
+E H+ I+F L Q +R + T VK E K P+L
Sbjct: 268 VEA-------------AHKMIDFLLRPEIAEQISRDTGYLTAVKASNEKFKDSPAL---- 310
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ ++ +
Sbjct: 311 ---FPSQEDLDRVEWQAAVGDKTVKYEDYFM 338
>gi|325291998|ref|YP_004277862.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
sp. H13-3]
gi|418408087|ref|ZP_12981404.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens 5A]
gi|325059851|gb|ADY63542.1| putrescine ABC transporter, substrate binding protein
[Agrobacterium sp. H13-3]
gi|358006073|gb|EHJ98398.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens 5A]
Length = 365
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V+ F+ + Y+ GD I +GWS D+L A KR V V+PK G +W D
Sbjct: 216 VKTFNSSAYIDELANGDSCITIGWSGDILQAKKRAEEAKNGVEVNYVIPKEGTYMWFDNL 275
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 276 AIPADAK 282
>gi|188583690|ref|YP_001927135.1| family 1 extracellular solute-binding protein [Methylobacterium
populi BJ001]
gi|179347188|gb|ACB82600.1| extracellular solute-binding protein family 1 [Methylobacterium
populi BJ001]
Length = 367
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 21 ISMVNSPREVI-------GTQAAAGR----IAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
+ +++SP ++I G +A + R V L + +R F + Y+ GD
Sbjct: 175 VMLLDSPEDLIPSILPFYGYKADSKRWDDITTVTDALYKVRGSIRKFHSSEYINGLANGD 234
Query: 70 VWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 109
V +AVG+S DV+ A KR +A +PK G +W D +AIP
Sbjct: 235 VCLAVGYSGDVMQAKKRAEESKNGVEIAYFIPKEGTLMWFDTFAIP 280
>gi|422620565|ref|ZP_16689242.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. japonica str. M301072]
gi|330900922|gb|EGH32341.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. japonica str. M301072]
Length = 364
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 6 FKDWKDLWLPELAGRISMV-NSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + NS +E +A A +A++ V F Y+
Sbjct: 174 FLDSADEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRP-------YVTYFHSAKYITD 226
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 227 LANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|160895165|ref|ZP_02075938.1| hypothetical protein CLOL250_02725 [Clostridium sp. L2-50]
gi|156863199|gb|EDO56630.1| ABC transporter, solute-binding protein [Clostridium sp. L2-50]
Length = 354
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 82/211 (38%), Gaps = 43/211 (20%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG----------TQAAAGRIA-VQQNLALLGNQVR 54
K + DL+ P L G+I ++ R VIG + ++A V+ L L + +
Sbjct: 156 IKGYADLFDPSLKGQIVALDDYRAVIGMTERSMGLSMNETDTAKLAEVETKLLTLKDNIA 215
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR- 113
++D GD I WS++V A+ ++ +V P+ GA + D WAI ++
Sbjct: 216 VYDSDSPKSSLISGDCNIGYCWSAEVALAMDENPSIKIVFPEEGAYKFIDNWAIAKGAKN 275
Query: 114 ----------LETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL 163
+ + +V +P ++ A A+ N K E
Sbjct: 276 YDNAMKFINYMCDPDVATKVMAEYPYLN-------ANATAVEANEDYKNNE--------- 319
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDY 194
A PAE+ + EF+ L TL+ Y
Sbjct: 320 -----AKNVPAEVFEKGEFVGNLDTDTLTVY 345
>gi|448747704|ref|ZP_21729359.1| Bacterial periplasmic spermidine/putrescine-binding protein
[Halomonas titanicae BH1]
gi|445564647|gb|ELY20764.1| Bacterial periplasmic spermidine/putrescine-binding protein
[Halomonas titanicae BH1]
Length = 369
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 14 LPELAGRISMVNSPREVIG-TQAAAGRIAVQQNL----------ALLGNQVRLFDRTHYL 62
L E +SM++S E++ A G + +NL A + + + F + Y+
Sbjct: 170 LSEAGCGLSMLDSADEMLSPAMAYLGFDPLSENLDDIEAAGELIAEVRDDMTYFHSSRYV 229
Query: 63 KVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 110
GD+ +A G+S D+ A R +A +PK GA+LW D+ A+PA
Sbjct: 230 SDLANGDICVAAGYSGDIFQAADRAEEAGRDFTIAYSIPKEGAALWFDMMAVPA 283
>gi|397657008|ref|YP_006497710.1| putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella oxytoca E718]
gi|394345525|gb|AFN31646.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella oxytoca E718]
Length = 370
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYYIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL 163
+A+P A ++ E Q + P + H A V L E ++ P++
Sbjct: 280 FAMPADAKNKDEAYQFLNYLMRPEVIAH----ISDHVYYANGNKASVPLVSEAIRNNPAI 335
Query: 164 DTKLIAGVPPAEILAR 179
PPA++ A+
Sbjct: 336 -------YPPADVFAK 344
>gi|402842571|ref|ZP_10890983.1| putrescine-binding periplasmic protein [Klebsiella sp. OBRC7]
gi|423102198|ref|ZP_17089900.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5242]
gi|376390094|gb|EHT02781.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5242]
gi|402279513|gb|EJU28298.1| putrescine-binding periplasmic protein [Klebsiella sp. OBRC7]
Length = 370
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYYIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL 163
+A+P A ++ E Q + P + H A V L E ++ P++
Sbjct: 280 FAMPADAKNKDEAYQFLNYLMRPDVIAH----ISDHVYYANGNKASVPLVSEAIRNNPAI 335
Query: 164 DTKLIAGVPPAEILAR 179
PPA++ A+
Sbjct: 336 -------YPPADVFAK 344
>gi|401762953|ref|YP_006577960.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400174487|gb|AFP69336.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 370
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL 163
+A+P A ++ E Q + P + H A V L E ++ P++
Sbjct: 280 FAMPADAKNKDEAYQFLNYLMRPDVIAH----ISDHVYYANGNKASVPLVSEAIRSNPAI 335
Query: 164 DTKLIAGVPPAEILAR 179
PPA++ A+
Sbjct: 336 -------YPPADVFAK 344
>gi|418935702|ref|ZP_13489464.1| extracellular solute-binding protein family 1 [Rhizobium sp.
PDO1-076]
gi|375057645|gb|EHS53807.1| extracellular solute-binding protein family 1 [Rhizobium sp.
PDO1-076]
Length = 366
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V+ F+ + Y+ GD+ + +GWS D+L A R + V+PK G +W D
Sbjct: 217 VKTFNSSSYIDDLANGDICVTIGWSGDILQAKARAEEAKNGVEIEYVIPKEGTYMWFDNL 276
Query: 107 AIPAASR 113
AIPA S+
Sbjct: 277 AIPADSK 283
>gi|262169279|ref|ZP_06036971.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC27]
gi|262022092|gb|EEY40801.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC27]
Length = 343
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIG--------TQAAAGRIAVQQNLALLGN---Q 52
N F+ W DLW PEL G++ +++ REV + + G + + A L
Sbjct: 145 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTGDKQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 265 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQDVAPL--- 309
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 310 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 337
>gi|261252984|ref|ZP_05945557.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417953565|ref|ZP_12596609.1| spermidine/putrescine transport system substrate-binding protein
[Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260936375|gb|EEX92364.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342816921|gb|EGU51811.1| spermidine/putrescine transport system substrate-binding protein
[Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 344
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 40/214 (18%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-------------LALLG 50
N F W DLW PEL G++ M++ REV A ++ N L L
Sbjct: 146 NDFTSWADLWNPELEGQLMMMDDTREVF--HIALRKLGYSGNSKDPKQIDEAYAELQKLM 203
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
V +F+ + + G+V + + W+ A N+ +V PK G W D +AI +
Sbjct: 204 PNVLVFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGMNLKLVFPKEGGIGWVDNFAISS 263
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLD 164
++ H+ I+F L Q +R + T V+ K L
Sbjct: 264 GAK------------NVEAAHKMIDFLLRPEIAEQISRDTGYLTAVEASNAKFKDVAPL- 310
Query: 165 TKLIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + + T+ E+ +
Sbjct: 311 ------FPSQEDLDRVEWQDAVGDMTVKYEEYFL 338
>gi|375259929|ref|YP_005019099.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
oxytoca KCTC 1686]
gi|365909407|gb|AEX04860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca KCTC 1686]
Length = 370
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYYIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL 163
+A+P A ++ E Q + P + H A V L E ++ P++
Sbjct: 280 FAMPADAKNKDEAYQFLNYLMRPEVIAH----ISDHVYYANGNKASVPLVSEAIRNNPAI 335
Query: 164 DTKLIAGVPPAEILAR 179
PPA++ A+
Sbjct: 336 -------YPPADVFAK 344
>gi|449144080|ref|ZP_21774898.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio mimicus CAIM 602]
gi|449080404|gb|EMB51320.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio mimicus CAIM 602]
Length = 343
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + K L
Sbjct: 265 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFKDVAPL--- 309
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 310 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 337
>gi|289768808|ref|ZP_06528186.1| polyamine-binding lipoprotein [Streptomyces lividans TK24]
gi|289699007|gb|EFD66436.1| polyamine-binding lipoprotein [Streptomyces lividans TK24]
Length = 397
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 13/117 (11%)
Query: 10 KDLWLPELAGRISMVNSPREVIGTQAAAG-------------RIAVQQNLALLGNQVRLF 56
DLW +L GR+++++ E RI Q + Q+R F
Sbjct: 192 SDLWAADLKGRVTLLSGMDEAFALLMQGNGVDITDWKTDDFHRICDQVEKQVAKGQIRRF 251
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
Y+K GDV +S DV+ ++ VVP+ GA LWA+ IP +R
Sbjct: 252 TGNDYIKDLSSGDVLACQAYSGDVIQLQADDPDIEFVVPEEGAELWAESLMIPDLAR 308
>gi|296268994|ref|YP_003651626.1| family 1 extracellular solute-binding protein [Thermobispora
bispora DSM 43833]
gi|296091781|gb|ADG87733.1| extracellular solute-binding protein family 1 [Thermobispora
bispora DSM 43833]
Length = 419
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 22/121 (18%)
Query: 11 DLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQNLALLGNQV 53
DLW P+ G++ M+ +E+ + AA ++ Q++ + V
Sbjct: 206 DLWNPKYKGKVGMMADAQEIANFGLLLLGIKPETSTPDDWEKAAEKLREQRDSGI----V 261
Query: 54 RLFDRTHYLKVFGIGDVWIAVGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLWAIPAAS 112
R + Y+ GD+W+ + WS DV + +++ V+P+ GA++W D IP +
Sbjct: 262 RKYYDQSYIDPLAKGDIWLTMAWSGDVFQKNISDGTDLRFVIPEEGATIWTDNMVIPKTA 321
Query: 113 R 113
Sbjct: 322 E 322
>gi|398983481|ref|ZP_10690058.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399013788|ref|ZP_10716090.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398112689|gb|EJM02545.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398157207|gb|EJM45608.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 365
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A+G+S D+ A R + N+A VPK G +LW D+
Sbjct: 216 VTYFHSSKYIGDLANGDICVAIGFSGDIFQAKNRAAEAKKGVNIAYAVPKEGGALWFDML 275
Query: 107 AIPAAS 112
AIP S
Sbjct: 276 AIPKDS 281
>gi|242239712|ref|YP_002987893.1| putrescine ABC transporter periplasmic-binding protein [Dickeya
dadantii Ech703]
gi|242131769|gb|ACS86071.1| extracellular solute-binding protein family 1 [Dickeya dadantii
Ech703]
Length = 369
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV+ A R N++ +PK GA + D+
Sbjct: 219 SIRYFHSSQYINDLANGDICVAIGWAGDVMQAANRAKEAKNGVNISYAIPKEGALAFFDV 278
Query: 106 WAIPAASR 113
+AIP ++
Sbjct: 279 FAIPKDAK 286
>gi|409436131|ref|ZP_11263323.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rhizobium mesoamericanum STM3625]
gi|408752041|emb|CCM74472.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rhizobium mesoamericanum STM3625]
Length = 366
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
VR F + Y+ GD+ IA G+S D+ A R + + +P GA +W D+
Sbjct: 217 VRKFHSSEYINALANGDICIAFGYSGDIFQAANRATEAKNGVEIGYSIPSQGAQMWFDMM 276
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 277 AIPADAK 283
>gi|373465167|ref|ZP_09556654.1| periplasmic spermidine/putrescine-binding protein PotD
[Lactobacillus kisonensis F0435]
gi|371761196|gb|EHO49831.1| periplasmic spermidine/putrescine-binding protein PotD
[Lactobacillus kisonensis F0435]
Length = 356
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 79/206 (38%), Gaps = 32/206 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W LW + I +++S R+++G T A IA + L L V+
Sbjct: 158 WNQLWQSKYRDGIMLIDSARDIMGFSLISLGKSVNTTKTANLIAARNKLNRLSPNVKAVV 217
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
G+ +AV WS + + + S++ VVP G+++W D IP ++
Sbjct: 218 ADEIKMYMAEGEAPVAVDWSGEASEMMSQNSHLHYVVPTEGSNMWFDNLVIPKTAK---- 273
Query: 118 QIGGRVRGPFPLIHQWIEF------CLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGV 171
F I+ ++ F Q A+ + ++T +LL D +
Sbjct: 274 --------HFKAIYAFLNFMNQPENAAQNAKYIGYSTPNNKALKLLPKSVRDDKQF---Y 322
Query: 172 PPAEILARCEFLEPLSEATLSDYEWL 197
PP ++L R + LS + Y L
Sbjct: 323 PPQDVLDRLQVYSNLSPQKVQQYNDL 348
>gi|433773782|ref|YP_007304249.1| spermidine/putrescine-binding periplasmic protein [Mesorhizobium
australicum WSM2073]
gi|433665797|gb|AGB44873.1| spermidine/putrescine-binding periplasmic protein [Mesorhizobium
australicum WSM2073]
Length = 365
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 106
+R F + Y+ GD+ +AVGWS DV A K+ + VPK GA +W D
Sbjct: 216 IRKFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEGAQMWFDQM 275
Query: 107 AIPA 110
AIPA
Sbjct: 276 AIPA 279
>gi|307130758|ref|YP_003882774.1| putrescine ABC transporter substrate-binding protein [Dickeya
dadantii 3937]
gi|306528287|gb|ADM98217.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Dickeya dadantii 3937]
Length = 369
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
VR F + Y+ GD+ +A+GW+ DV+ A R N++ +PK GA + D+
Sbjct: 219 SVRYFHSSQYINDLANGDICVAIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDV 278
Query: 106 WAIPAASR 113
+AIP ++
Sbjct: 279 FAIPKDAK 286
>gi|21224009|ref|NP_629788.1| polyamine-binding lipoprotein [Streptomyces coelicolor A3(2)]
gi|3319728|emb|CAA19894.1| putative polyamine-binding lipoprotein [Streptomyces coelicolor
A3(2)]
Length = 399
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 13/117 (11%)
Query: 10 KDLWLPELAGRISMVNSPREVIGTQAAAG-------------RIAVQQNLALLGNQVRLF 56
DLW +L GR+++++ E RI Q + Q+R F
Sbjct: 194 SDLWAADLKGRVTLLSGMDEAFALLMQGNGVDITDWKTDDFHRICDQVEKQVAKGQIRRF 253
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
Y+K GDV +S DV+ ++ VVP+ GA LWA+ IP +R
Sbjct: 254 TGNDYIKDLSSGDVLACQAYSGDVIQLQADDPDIEFVVPEEGAELWAESLMIPDLAR 310
>gi|410458782|ref|ZP_11312539.1| spermidine:putrescine ABC transporter [Bacillus azotoformans LMG
9581]
gi|409931132|gb|EKN68120.1| spermidine:putrescine ABC transporter [Bacillus azotoformans LMG
9581]
Length = 357
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 78/207 (37%), Gaps = 34/207 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAA-GRIAVQQNLALLGNQVRLFDR-THYLKVFG 66
W DLW P L +I +++ REV+G + G N L DR T +K
Sbjct: 158 WNDLWDPALKNQILLIDGAREVMGMGLNSLGYSLNDTNKDHLMEAKEKLDRLTPNVKAI- 216
Query: 67 IGD----------VWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+GD I + WS D + N+ VVP+ G++LW D IP ++
Sbjct: 217 VGDEIKMLMANEEAAIGLVWSGDAADIMSENENLDYVVPEEGSNLWFDNMVIPKTAK--- 273
Query: 117 KQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLIAG 170
HQ+I F L Q + ++T K E LK P
Sbjct: 274 ---------NIEAAHQFINFMLDPEVAAQNTEYVSYSTPNK---EALKYMPRDMVTDERF 321
Query: 171 VPPAEILARCEFLEPLSEATLSDYEWL 197
P E+ + E E L + L+ Y L
Sbjct: 322 YPSPELTEKLEVYENLGKKNLAYYNAL 348
>gi|157374200|ref|YP_001472800.1| extracellular solute-binding protein [Shewanella sediminis HAW-EB3]
gi|157316574|gb|ABV35672.1| extracellular solute-binding protein, family 1 [Shewanella
sediminis HAW-EB3]
Length = 366
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADL 105
+ F + Y+ GD+ +AVG+S D+L A R + +PK GA+LW D+
Sbjct: 216 HITYFHSSRYITDLANGDLCVAVGYSGDILQAATRAEEAENGHVIGYSIPKEGANLWFDM 275
Query: 106 WAIPA 110
AIPA
Sbjct: 276 LAIPA 280
>gi|399040652|ref|ZP_10735990.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF122]
gi|398061439|gb|EJL53235.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF122]
Length = 366
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
VR F + Y+ GD+ IA G+S D+ A R + + +P GA +W D+
Sbjct: 217 VRKFHSSEYINALANGDICIAFGYSGDIFQAANRATEAKNGVEIGYSIPSQGAQMWFDMM 276
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 277 AIPADAK 283
>gi|319782139|ref|YP_004141615.1| family 1 extracellular solute-binding protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317168027|gb|ADV11565.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 365
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 106
+R F + Y+ GD+ +AVGWS DV A K+ + VPK GA +W D
Sbjct: 216 IRKFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEGAQMWFDQM 275
Query: 107 AIPA 110
AIPA
Sbjct: 276 AIPA 279
>gi|383821148|ref|ZP_09976396.1| spermidine/putrescine-binding periplasmic protein [Mycobacterium
phlei RIVM601174]
gi|383333611|gb|EID12060.1| spermidine/putrescine-binding periplasmic protein [Mycobacterium
phlei RIVM601174]
Length = 391
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 31/209 (14%)
Query: 10 KDLWLPELAGRISMVNSPREVIGT--QAAAGRIA------VQQNLALLGNQ-----VRLF 56
+DLW PE GR+S+ ++ +G Q+ G A VQ+ + ++ Q +R F
Sbjct: 190 EDLWAPEFKGRVSLFTDFQDGLGMIMQSLGGDPAAPTLESVQKAIDVVAEQKAKGQIRRF 249
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
Y G++ IA +S DV+ ++ VVP+SG + + D IP ++ +
Sbjct: 250 TGNDYADDLAAGNIVIAQAYSGDVVQLQADNPDLQFVVPESGCTDFLDTMVIPYTTQNQK 309
Query: 117 KQIGGRVRGPFPLIHQWIEFCL---QTARALPFNTRVKLPEELLKGKPSLDTKLIAGV-- 171
+I++ A+ + + V + ++ + LD +L
Sbjct: 310 A------------AEAFIDYIYDRENYAKLVAYTQFVPVLSDMTEALDKLDPELAKNELI 357
Query: 172 -PPAEILARCEFLEPLSEATLSDYEWLVA 199
P E LAR + PL + +Y L A
Sbjct: 358 NPSPETLARVKAWAPLEDEQKQEYATLYA 386
>gi|442804688|ref|YP_007372837.1| spermidine/putrescine transport system substarte-binding protein
PotD [Clostridium stercorarium subsp. stercorarium DSM
8532]
gi|442740538|gb|AGC68227.1| spermidine/putrescine transport system substarte-binding protein
PotD [Clostridium stercorarium subsp. stercorarium DSM
8532]
Length = 352
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 32/200 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG--------TQAAAGRIAVQQNLALLGNQVRLFDRTH 60
W LW + AG+I M++S R+ IG + ++Q LL Q L + +
Sbjct: 152 WDILWNEKYAGKILMLDSMRDTIGVALKKLGYSLNTTDTEKLEQAKQLLIQQRPLVNGYY 211
Query: 61 YLKVFGI---GDVWIAVGWSSDVLPAV-KRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
++ + GD IAV WS + + + + VVPK G++LW D IP S+ +
Sbjct: 212 VDEIKDMMINGDAAIAVDWSGSAMDIYWEGIDYIKYVVPKEGSNLWFDCMVIPKTSQHKK 271
Query: 117 KQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLP-------EELLKGKPSLDTKLIA 169
+ +I F L A + V E +++ P + ++ A
Sbjct: 272 EA------------EMFINFMLDPENAYQNSLYVGYASPVTEAFERIMQENPEV-AEMDA 318
Query: 170 GVPPAEILARCEFLEPLSEA 189
P E+L +CE L ++
Sbjct: 319 YNPSEEVLDKCEVFIDLGDS 338
>gi|402702656|ref|ZP_10850635.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas fragi A22]
Length = 364
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 106
V F + Y+ G++ +A+G+S DV A K+ N+A +VPK G +LW D+
Sbjct: 215 VTYFHSSKYISDLANGNICVAIGFSGDVFQAKARAEEAKKGVNIAYIVPKEGGALWFDML 274
Query: 107 AIPAAS 112
AIP S
Sbjct: 275 AIPKDS 280
>gi|337267065|ref|YP_004611120.1| family 1 extracellular solute-binding protein [Mesorhizobium
opportunistum WSM2075]
gi|336027375|gb|AEH87026.1| extracellular solute-binding protein family 1 [Mesorhizobium
opportunistum WSM2075]
Length = 365
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 106
+R F + Y+ GD+ +AVGWS DV A K+ + VPK GA +W D
Sbjct: 216 IRKFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEGAQMWFDQM 275
Query: 107 AIPA 110
AIPA
Sbjct: 276 AIPA 279
>gi|260778681|ref|ZP_05887573.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio coralliilyticus ATCC BAA-450]
gi|260604845|gb|EEX31140.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio coralliilyticus ATCC BAA-450]
Length = 344
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G A +I L L
Sbjct: 146 NDFQSWADLWNPELEGQVMLMDDTREVFHIALRKLGYSGNSTDAKQIDEAYAELQKLMPN 205
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A N+ +V PK G W D +AI + +
Sbjct: 206 VLVFNSDNPGAPYMSGEVGVGMLWNGSAAAAQSEGMNLKLVFPKEGGIGWVDNFAISSGA 265
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
H+ I+F L Q +R + T V+ K L
Sbjct: 266 ------------ANVDAAHKMIDFLLRPEIAEQISRDTGYLTAVEASNAKFKDVAPL--- 310
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + + T+ ++ +
Sbjct: 311 ----FPSQEDLDRVEWQDAVGDLTMKYEDYFM 338
>gi|354722725|ref|ZP_09036940.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter mori LMG 25706]
Length = 370
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL 163
+A+P A ++ E Q + P + H A V L E ++ P++
Sbjct: 280 FAMPADAKNKDEAYQFLNYLMRPDVIAH----ISDHVYYANGNKASVPLVSEEIRNNPAI 335
Query: 164 DTKLIAGVPPAEILAR 179
PPA++ A+
Sbjct: 336 -------YPPADVFAK 344
>gi|295702413|ref|YP_003595488.1| spermidine/putrescine import ABC transporter
spermidine/putrescine-binding protein PotD [Bacillus
megaterium DSM 319]
gi|294800072|gb|ADF37138.1| spermidine/putrescine import ABC transporter,
spermidine/putrescine-binding protein PotD [Bacillus
megaterium DSM 319]
Length = 357
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 34/209 (16%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQ-NLALLGNQVRLFDR-THYLKV 64
K W DLW P+L +I + + REV+G + ++ N A L R D T +K
Sbjct: 156 KSWNDLWDPKLKNQILLADGAREVMGMGLNSLNYSLNDTNKAHLQEAKRKLDTLTPNVKA 215
Query: 65 FGIGD----------VWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+GD + V WS D + + VVP+ G++LW D IP ++
Sbjct: 216 I-VGDEIKMLLANEEAAVGVVWSGDASEIMSENDKLNYVVPEEGSNLWFDNMVIPKTAK- 273
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
V G H+++ F L Q A + ++T K + L + + D +
Sbjct: 274 -------NVEGA----HKFMNFMLDPKHAAQNAEYVGYSTPNKKALDYLPKEVAEDERF- 321
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYEWL 197
P E+ + E L + L+ Y L
Sbjct: 322 --YPDEELTNKLEVYNNLGKRMLAYYNEL 348
>gi|449468189|ref|XP_004151804.1| PREDICTED: putrescine-binding periplasmic protein-like, partial
[Cucumis sativus]
Length = 292
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 23/136 (16%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 148 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 207
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL 163
+A+P A ++ E Q + P H + + ++P L E ++ P++
Sbjct: 208 FAMPADAKNKEEAYQFLNYLMRPHTSNH--VYYANGNKASVP------LVSEEIRNNPAI 259
Query: 164 DTKLIAGVPPAEILAR 179
PPA++ A+
Sbjct: 260 -------YPPADVFAK 268
>gi|57340024|gb|AAW49999.1| hypothetical protein FTT0481 [synthetic construct]
Length = 428
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGTQAAAGRIAVQQN---------LALLGN---QVRLFDRTHYLKVFGIG 68
+S+++ P ++ G I N L ++ N ++ FD Y F G
Sbjct: 217 VSLLDEPEQIFGNYFFYHGIDPNTNSKAEYEKAALDIIKNVRPYIKYFDSNKYQNDFTAG 276
Query: 69 DVWIAVGWSSDVLPAVKRMSNV------AVVVPKSGASLWADLWAIPAASR 113
++ + +G+S DV+ +V+R +V A V+PK G ++W D+ IP ++
Sbjct: 277 NLCLVMGYSGDVVRSVERAKSVNPDVTLAYVIPKEGTNIWFDMLMIPKGAK 327
>gi|295096449|emb|CBK85539.1| Spermidine/putrescine-binding periplasmic protein [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 370
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL 163
+A+P A ++ E Q + P + H A V L E ++ P++
Sbjct: 280 FAMPADAKNKEEAYQFLNYLMRPEVIAH----ISDHVYYANGNKASVPLVSEEIRNNPAI 335
Query: 164 DTKLIAGVPPAEILAR 179
PPA++ A+
Sbjct: 336 -------YPPADVFAK 344
>gi|104781971|ref|YP_608469.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas entomophila L48]
gi|95110958|emb|CAK15676.1| putative putrescine ABC transporter, periplasmic putrescine-binding
protein [Pseudomonas entomophila L48]
Length = 362
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
+ F + Y+ GDV IA G+S DVL A R VA +PK G++LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDVCIAFGYSGDVLQAAHRAEEAGNGVKVAYSIPKEGSNLWFDLL 272
Query: 107 AIPAASR 113
AIP ++
Sbjct: 273 AIPKDAK 279
>gi|387824097|ref|YP_005823568.1| Putrescine ABC transporter putrescine-binding protein potF
[Francisella cf. novicida 3523]
gi|328675696|gb|AEB28371.1| Putrescine ABC transporter putrescine-binding protein potF
[Francisella cf. novicida 3523]
Length = 393
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGTQAAAGRIAVQQN---------LALLGN---QVRLFDRTHYLKVFGIG 68
+S+++ P ++ G I N L ++ N ++ FD Y F G
Sbjct: 191 VSLLDEPEQIFGNYFFYHGIDPNTNSKAEYEKAALDIIKNVRPYIKYFDSNKYQNDFTAG 250
Query: 69 DVWIAVGWSSDVLPAVKRMSNV------AVVVPKSGASLWADLWAIPAASR 113
++ + +G+S DV+ +V+R +V A V+PK G ++W D+ IP ++
Sbjct: 251 NLCLVMGYSGDVVRSVERAKSVNPDVTLAYVIPKEGTNIWFDMLMIPKGAK 301
>gi|398878302|ref|ZP_10633427.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398882495|ref|ZP_10637462.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398198647|gb|EJM85601.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398200559|gb|EJM87470.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 365
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ GD+ IA+G+S D+ A R + N+A +PK G +LW D+
Sbjct: 216 VTYFHSSKYIADLANGDICIAIGFSGDMFQARNRAAEAKKGVNIAYTIPKEGGALWFDML 275
Query: 107 AIPAAS 112
AIP S
Sbjct: 276 AIPKDS 281
>gi|51595702|ref|YP_069893.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis IP 32953]
gi|108806618|ref|YP_650534.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Antiqua]
gi|108812810|ref|YP_648577.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Nepal516]
gi|145599638|ref|YP_001163714.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Pestoides F]
gi|149366690|ref|ZP_01888724.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CA88-4125]
gi|153950739|ref|YP_001401610.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis IP 31758]
gi|162421714|ref|YP_001606071.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Angola]
gi|165924359|ref|ZP_02220191.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165936192|ref|ZP_02224761.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. IP275]
gi|166009827|ref|ZP_02230725.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166211526|ref|ZP_02237561.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. B42003004]
gi|167399794|ref|ZP_02305312.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167419605|ref|ZP_02311358.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167424261|ref|ZP_02316014.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167469049|ref|ZP_02333753.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Yersinia pestis FV-1]
gi|170024955|ref|YP_001721460.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis YPIII]
gi|186894775|ref|YP_001871887.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis PB1/+]
gi|218928481|ref|YP_002346356.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis CO92]
gi|229841290|ref|ZP_04461449.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229843393|ref|ZP_04463539.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
India 195]
gi|229895767|ref|ZP_04510937.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Pestoides A]
gi|229903229|ref|ZP_04518342.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Nepal516]
gi|270487022|ref|ZP_06204096.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM
D27]
gi|294503326|ref|YP_003567388.1| putrescine-binding periplasmic protein [Yersinia pestis Z176003]
gi|384121769|ref|YP_005504389.1| putrescine-binding periplasmic protein [Yersinia pestis D106004]
gi|384125432|ref|YP_005508046.1| putrescine-binding periplasmic protein [Yersinia pestis D182038]
gi|384141038|ref|YP_005523740.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis A1122]
gi|384415312|ref|YP_005624674.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis biovar Medievalis str. Harbin 35]
gi|420546012|ref|ZP_15044054.1| putrescine-binding periplasmic protein [Yersinia pestis PY-01]
gi|420551322|ref|ZP_15048809.1| putrescine-binding periplasmic protein [Yersinia pestis PY-02]
gi|420556862|ref|ZP_15053699.1| putrescine-binding periplasmic protein [Yersinia pestis PY-03]
gi|420562420|ref|ZP_15058583.1| putrescine-binding periplasmic protein [Yersinia pestis PY-04]
gi|420567439|ref|ZP_15063123.1| putrescine-binding periplasmic protein [Yersinia pestis PY-05]
gi|420573088|ref|ZP_15068249.1| putrescine-binding periplasmic protein [Yersinia pestis PY-06]
gi|420578406|ref|ZP_15073065.1| putrescine-binding periplasmic protein [Yersinia pestis PY-07]
gi|420583781|ref|ZP_15077952.1| putrescine-binding periplasmic protein [Yersinia pestis PY-08]
gi|420588922|ref|ZP_15082586.1| putrescine-binding periplasmic protein [Yersinia pestis PY-09]
gi|420594243|ref|ZP_15087376.1| putrescine-binding periplasmic protein [Yersinia pestis PY-10]
gi|420599926|ref|ZP_15092456.1| putrescine-binding periplasmic protein [Yersinia pestis PY-11]
gi|420605403|ref|ZP_15097357.1| putrescine-binding periplasmic protein [Yersinia pestis PY-12]
gi|420610751|ref|ZP_15102191.1| putrescine-binding periplasmic protein [Yersinia pestis PY-13]
gi|420616055|ref|ZP_15106888.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-14]
gi|420621445|ref|ZP_15111640.1| putrescine-binding periplasmic protein [Yersinia pestis PY-15]
gi|420626498|ref|ZP_15116222.1| putrescine-binding periplasmic protein [Yersinia pestis PY-16]
gi|420631706|ref|ZP_15120929.1| putrescine-binding periplasmic protein [Yersinia pestis PY-19]
gi|420636814|ref|ZP_15125505.1| putrescine-binding periplasmic protein [Yersinia pestis PY-25]
gi|420642346|ref|ZP_15130505.1| putrescine-binding periplasmic protein [Yersinia pestis PY-29]
gi|420647544|ref|ZP_15135254.1| putrescine-binding periplasmic protein [Yersinia pestis PY-32]
gi|420653181|ref|ZP_15140319.1| putrescine-binding periplasmic protein [Yersinia pestis PY-34]
gi|420658704|ref|ZP_15145282.1| putrescine-binding periplasmic protein [Yersinia pestis PY-36]
gi|420663998|ref|ZP_15150017.1| putrescine-binding periplasmic protein [Yersinia pestis PY-42]
gi|420668962|ref|ZP_15154515.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-45]
gi|420674289|ref|ZP_15159368.1| putrescine-binding periplasmic protein [Yersinia pestis PY-46]
gi|420679845|ref|ZP_15164402.1| putrescine-binding periplasmic protein [Yersinia pestis PY-47]
gi|420685101|ref|ZP_15169109.1| putrescine-binding periplasmic protein [Yersinia pestis PY-48]
gi|420690277|ref|ZP_15173691.1| putrescine-binding periplasmic protein [Yersinia pestis PY-52]
gi|420696075|ref|ZP_15178772.1| putrescine-binding periplasmic protein [Yersinia pestis PY-53]
gi|420701483|ref|ZP_15183371.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-54]
gi|420707437|ref|ZP_15188236.1| putrescine-binding periplasmic protein [Yersinia pestis PY-55]
gi|420712778|ref|ZP_15193045.1| putrescine-binding periplasmic protein [Yersinia pestis PY-56]
gi|420718189|ref|ZP_15197781.1| putrescine-binding periplasmic protein [Yersinia pestis PY-58]
gi|420723771|ref|ZP_15202593.1| putrescine-binding periplasmic protein [Yersinia pestis PY-59]
gi|420729368|ref|ZP_15207586.1| putrescine-binding periplasmic protein [Yersinia pestis PY-60]
gi|420734446|ref|ZP_15212171.1| putrescine-binding periplasmic protein [Yersinia pestis PY-61]
gi|420739919|ref|ZP_15217101.1| putrescine-binding periplasmic protein [Yersinia pestis PY-63]
gi|420745304|ref|ZP_15221816.1| putrescine-binding periplasmic protein [Yersinia pestis PY-64]
gi|420751046|ref|ZP_15226754.1| putrescine-binding periplasmic protein [Yersinia pestis PY-65]
gi|420756368|ref|ZP_15231339.1| putrescine-binding periplasmic protein [Yersinia pestis PY-66]
gi|420762171|ref|ZP_15236104.1| putrescine-binding periplasmic protein [Yersinia pestis PY-71]
gi|420767417|ref|ZP_15240838.1| putrescine-binding periplasmic protein [Yersinia pestis PY-72]
gi|420772395|ref|ZP_15245313.1| putrescine-binding periplasmic protein [Yersinia pestis PY-76]
gi|420777841|ref|ZP_15250166.1| putrescine-binding periplasmic protein [Yersinia pestis PY-88]
gi|420783361|ref|ZP_15255003.1| putrescine-binding periplasmic protein [Yersinia pestis PY-89]
gi|420788694|ref|ZP_15259708.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-90]
gi|420794161|ref|ZP_15264645.1| putrescine-binding periplasmic protein [Yersinia pestis PY-91]
gi|420799283|ref|ZP_15269250.1| putrescine-binding periplasmic protein [Yersinia pestis PY-92]
gi|420804630|ref|ZP_15274064.1| putrescine-binding periplasmic protein [Yersinia pestis PY-93]
gi|420809886|ref|ZP_15278819.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-94]
gi|420815566|ref|ZP_15283914.1| putrescine-binding periplasmic protein [Yersinia pestis PY-95]
gi|420820764|ref|ZP_15288616.1| putrescine-binding periplasmic protein [Yersinia pestis PY-96]
gi|420825852|ref|ZP_15293170.1| putrescine-binding periplasmic protein [Yersinia pestis PY-98]
gi|420831629|ref|ZP_15298392.1| putrescine-binding periplasmic protein [Yersinia pestis PY-99]
gi|420836477|ref|ZP_15302761.1| putrescine-binding periplasmic protein [Yersinia pestis PY-100]
gi|420841626|ref|ZP_15307426.1| putrescine-binding periplasmic protein [Yersinia pestis PY-101]
gi|420847242|ref|ZP_15312495.1| putrescine-binding periplasmic protein [Yersinia pestis PY-102]
gi|420852680|ref|ZP_15317268.1| putrescine-binding periplasmic protein [Yersinia pestis PY-103]
gi|420858176|ref|ZP_15321956.1| putrescine-binding periplasmic protein [Yersinia pestis PY-113]
gi|421762784|ref|ZP_16199581.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis INS]
gi|51588984|emb|CAH20601.1| ABC type periplasmic putrescine/spermidine binding protein, potF
[Yersinia pseudotuberculosis IP 32953]
gi|108776458|gb|ABG18977.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Nepal516]
gi|108778531|gb|ABG12589.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Antiqua]
gi|115347092|emb|CAL19984.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CO92]
gi|145211334|gb|ABP40741.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Pestoides F]
gi|149291064|gb|EDM41139.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CA88-4125]
gi|152962234|gb|ABS49695.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pseudotuberculosis IP 31758]
gi|162354529|gb|ABX88477.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis Angola]
gi|165915806|gb|EDR34414.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. IP275]
gi|165923419|gb|EDR40551.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165991223|gb|EDR43524.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166207297|gb|EDR51777.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. B42003004]
gi|166962346|gb|EDR58367.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167050502|gb|EDR61910.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167057110|gb|EDR66873.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169751489|gb|ACA69007.1| extracellular solute-binding protein family 1 [Yersinia
pseudotuberculosis YPIII]
gi|186697801|gb|ACC88430.1| extracellular solute-binding protein family 1 [Yersinia
pseudotuberculosis PB1/+]
gi|229678999|gb|EEO75102.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Nepal516]
gi|229689740|gb|EEO81801.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
India 195]
gi|229697656|gb|EEO87703.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700690|gb|EEO88719.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Pestoides A]
gi|262361365|gb|ACY58086.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
D106004]
gi|262365096|gb|ACY61653.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
D182038]
gi|270335526|gb|EFA46303.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM
D27]
gi|294353785|gb|ADE64126.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Z176003]
gi|320015816|gb|ADV99387.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342856167|gb|AEL74720.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis A1122]
gi|391429137|gb|EIQ91021.1| putrescine-binding periplasmic protein [Yersinia pestis PY-01]
gi|391430413|gb|EIQ92134.1| putrescine-binding periplasmic protein [Yersinia pestis PY-02]
gi|391431954|gb|EIQ93448.1| putrescine-binding periplasmic protein [Yersinia pestis PY-03]
gi|391445044|gb|EIR05211.1| putrescine-binding periplasmic protein [Yersinia pestis PY-04]
gi|391445985|gb|EIR06067.1| putrescine-binding periplasmic protein [Yersinia pestis PY-05]
gi|391449804|gb|EIR09495.1| putrescine-binding periplasmic protein [Yersinia pestis PY-06]
gi|391461597|gb|EIR20195.1| putrescine-binding periplasmic protein [Yersinia pestis PY-07]
gi|391462641|gb|EIR21136.1| putrescine-binding periplasmic protein [Yersinia pestis PY-08]
gi|391464758|gb|EIR23010.1| putrescine-binding periplasmic protein [Yersinia pestis PY-09]
gi|391478057|gb|EIR35020.1| putrescine-binding periplasmic protein [Yersinia pestis PY-10]
gi|391479255|gb|EIR36070.1| putrescine-binding periplasmic protein [Yersinia pestis PY-12]
gi|391479435|gb|EIR36226.1| putrescine-binding periplasmic protein [Yersinia pestis PY-11]
gi|391493548|gb|EIR48888.1| putrescine-binding periplasmic protein [Yersinia pestis PY-13]
gi|391494646|gb|EIR49849.1| putrescine-binding periplasmic protein [Yersinia pestis PY-15]
gi|391497235|gb|EIR52109.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-14]
gi|391509359|gb|EIR62991.1| putrescine-binding periplasmic protein [Yersinia pestis PY-16]
gi|391510142|gb|EIR63704.1| putrescine-binding periplasmic protein [Yersinia pestis PY-19]
gi|391514371|gb|EIR67479.1| putrescine-binding periplasmic protein [Yersinia pestis PY-25]
gi|391524903|gb|EIR77080.1| putrescine-binding periplasmic protein [Yersinia pestis PY-29]
gi|391527667|gb|EIR79561.1| putrescine-binding periplasmic protein [Yersinia pestis PY-34]
gi|391528645|gb|EIR80444.1| putrescine-binding periplasmic protein [Yersinia pestis PY-32]
gi|391541013|gb|EIR91591.1| putrescine-binding periplasmic protein [Yersinia pestis PY-36]
gi|391543171|gb|EIR93528.1| putrescine-binding periplasmic protein [Yersinia pestis PY-42]
gi|391544275|gb|EIR94507.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-45]
gi|391558283|gb|EIS07178.1| putrescine-binding periplasmic protein [Yersinia pestis PY-46]
gi|391558950|gb|EIS07785.1| putrescine-binding periplasmic protein [Yersinia pestis PY-47]
gi|391560061|gb|EIS08733.1| putrescine-binding periplasmic protein [Yersinia pestis PY-48]
gi|391573487|gb|EIS20537.1| putrescine-binding periplasmic protein [Yersinia pestis PY-52]
gi|391574043|gb|EIS21001.1| putrescine-binding periplasmic protein [Yersinia pestis PY-53]
gi|391585571|gb|EIS30965.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-54]
gi|391585813|gb|EIS31176.1| putrescine-binding periplasmic protein [Yersinia pestis PY-55]
gi|391589491|gb|EIS34379.1| putrescine-binding periplasmic protein [Yersinia pestis PY-56]
gi|391602784|gb|EIS46038.1| putrescine-binding periplasmic protein [Yersinia pestis PY-60]
gi|391602825|gb|EIS46075.1| putrescine-binding periplasmic protein [Yersinia pestis PY-58]
gi|391604444|gb|EIS47452.1| putrescine-binding periplasmic protein [Yersinia pestis PY-59]
gi|391617103|gb|EIS58687.1| putrescine-binding periplasmic protein [Yersinia pestis PY-61]
gi|391617910|gb|EIS59408.1| putrescine-binding periplasmic protein [Yersinia pestis PY-63]
gi|391624218|gb|EIS64885.1| putrescine-binding periplasmic protein [Yersinia pestis PY-64]
gi|391628962|gb|EIS68955.1| putrescine-binding periplasmic protein [Yersinia pestis PY-65]
gi|391640283|gb|EIS78856.1| putrescine-binding periplasmic protein [Yersinia pestis PY-71]
gi|391641901|gb|EIS80245.1| putrescine-binding periplasmic protein [Yersinia pestis PY-66]
gi|391642643|gb|EIS80890.1| putrescine-binding periplasmic protein [Yersinia pestis PY-72]
gi|391652353|gb|EIS89417.1| putrescine-binding periplasmic protein [Yersinia pestis PY-76]
gi|391657874|gb|EIS94341.1| putrescine-binding periplasmic protein [Yersinia pestis PY-88]
gi|391662913|gb|EIS98807.1| putrescine-binding periplasmic protein [Yersinia pestis PY-89]
gi|391665174|gb|EIT00787.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-90]
gi|391671686|gb|EIT06596.1| putrescine-binding periplasmic protein [Yersinia pestis PY-91]
gi|391683384|gb|EIT17167.1| putrescine-binding periplasmic protein [Yersinia pestis PY-93]
gi|391684769|gb|EIT18392.1| putrescine-binding periplasmic protein [Yersinia pestis PY-92]
gi|391685532|gb|EIT19059.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-94]
gi|391697257|gb|EIT29662.1| putrescine-binding periplasmic protein [Yersinia pestis PY-95]
gi|391700935|gb|EIT32985.1| putrescine-binding periplasmic protein [Yersinia pestis PY-96]
gi|391702206|gb|EIT34126.1| putrescine-binding periplasmic protein [Yersinia pestis PY-98]
gi|391711411|gb|EIT42379.1| putrescine-binding periplasmic protein [Yersinia pestis PY-99]
gi|391717995|gb|EIT48287.1| putrescine-binding periplasmic protein [Yersinia pestis PY-100]
gi|391718497|gb|EIT48738.1| putrescine-binding periplasmic protein [Yersinia pestis PY-101]
gi|391729174|gb|EIT58194.1| putrescine-binding periplasmic protein [Yersinia pestis PY-102]
gi|391732267|gb|EIT60859.1| putrescine-binding periplasmic protein [Yersinia pestis PY-103]
gi|391736137|gb|EIT64190.1| putrescine-binding periplasmic protein [Yersinia pestis PY-113]
gi|411176990|gb|EKS47005.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis INS]
Length = 369
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +AVGW+ D++ A R NVA +PK GA + D+
Sbjct: 219 NIRYFHSSQYINDLANGDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDV 278
Query: 106 WAIPAASR 113
+A+P ++
Sbjct: 279 FAMPTDAK 286
>gi|392978294|ref|YP_006476882.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter cloacae subsp. dissolvens SDM]
gi|392324227|gb|AFM59180.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. dissolvens
SDM]
Length = 370
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 23/138 (16%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIH--QWIEFCLQTARALPFNTRVKLPEELLKGKP 161
+A+P A ++ E Q + P + H + + +LP L E ++ P
Sbjct: 280 FAMPADAKNKDEAYQFLNYLMRPEVIAHISDHVYYANGNKASLP------LISEEIRKNP 333
Query: 162 SLDTKLIAGVPPAEILAR 179
++ PPA++ A+
Sbjct: 334 AI-------YPPADVFAK 344
>gi|253681534|ref|ZP_04862331.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum D str. 1873]
gi|253561246|gb|EES90698.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum D str. 1873]
Length = 347
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 78/204 (38%), Gaps = 33/204 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLF- 56
W LW P+ +I MV+S R+ I T +Q L VR +
Sbjct: 151 WNALWNPKYKDQILMVDSQRDAIAVALKKLGYSINTTNKGELKKAEQELMKQKPLVRAYV 210
Query: 57 -DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
D L V G IAV WS D + +K N+ V+PK G++LW D IP S +
Sbjct: 211 GDEVKDLMVDEEG--AIAVVWSGDAITMMKNNPNLRYVIPKEGSNLWFDNMVIPKGSSHK 268
Query: 116 TKQ---IGGRVRGPFPLIH-QWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGV 171
+ I R L + +I + A+ + L +E K A
Sbjct: 269 KQAELFINFMTRADISLKNVDYIGYSTPNAKTMEM-----LDDETKNNK--------AAY 315
Query: 172 PPAEILARCEFLEPLSEATLSDYE 195
P E + +CE L + + DY+
Sbjct: 316 PEYEKIKKCEVFIDLGDF-IKDYD 338
>gi|134302441|ref|YP_001122411.1| hypothetical protein FTW_1589 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134050218|gb|ABO47289.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 380
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGTQAAAGRIAVQQN---------LALLGN---QVRLFDRTHYLKVFGIG 68
+S+++ P ++ G I N L ++ N ++ FD Y F G
Sbjct: 178 VSLLDEPEQIFGNYFFYHGIDPNTNSKAEYEKAALDIIKNVRPYIKYFDSNKYQNDFTAG 237
Query: 69 DVWIAVGWSSDVLPAVKRMSNV------AVVVPKSGASLWADLWAIPAASR 113
++ + +G+S DV+ +V+R +V A V+PK G ++W D+ IP ++
Sbjct: 238 NLCLVMGYSGDVVRSVERAKSVNPDVTLAYVIPKEGTNIWFDMLMIPKGAK 288
>gi|418993721|ref|ZP_13541358.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG290]
gi|377746880|gb|EHT70850.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG290]
Length = 357
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 32/214 (14%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F WK L+ P+ +I +V+ RE+IG + + +++L L QVR
Sbjct: 155 FDSWKSLYNPKFKNQILLVDGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVR 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + IAV WS P V+ V+PK G++LW D IP ++
Sbjct: 215 GVVGDEITMMLEQNEGNIAVVWSGVAAPLVQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ- 273
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTKLI 168
G + +++ F L Q + + T K +LL + D +
Sbjct: 274 -------NKEGAY----KFMNFLLDAKNNKQNTEFVGYATPNKAARQLLPKEIKDDHRF- 321
Query: 169 AGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P E R E + L + LS+Y N +
Sbjct: 322 --YPTKEEQKRLEVYKDLGQEFLSEYNENFLNFK 353
>gi|334122697|ref|ZP_08496733.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Enterobacter hormaechei ATCC 49162]
gi|333391812|gb|EGK62921.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Enterobacter hormaechei ATCC 49162]
Length = 370
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL 163
+A+P A ++ E Q + P + H A V L E ++ P++
Sbjct: 280 FAMPADAKNKDEAYQFLNYLMRPEVIAH----ISDHVYYANGNKASVPLVSEEIRNNPAI 335
Query: 164 DTKLIAGVPPAEILAR 179
PPA++ A+
Sbjct: 336 -------YPPADVFAK 344
>gi|345298511|ref|YP_004827869.1| family 1 extracellular solute-binding protein [Enterobacter
asburiae LF7a]
gi|345092448|gb|AEN64084.1| extracellular solute-binding protein family 1 [Enterobacter
asburiae LF7a]
Length = 370
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL 163
+A+P A ++ E Q + P + H A V L E ++ P++
Sbjct: 280 FAMPADAKNKDEAYQFLNYLMRPDVIAH----ISDHVYYANGNKASVPLVSEEIRNNPAI 335
Query: 164 DTKLIAGVPPAEILAR 179
PPA++ A+
Sbjct: 336 -------YPPADVFAK 344
>gi|315635181|ref|ZP_07890459.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Aggregatibacter segnis
ATCC 33393]
gi|315476143|gb|EFU66897.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Aggregatibacter segnis
ATCC 33393]
Length = 348
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ + + REV T + A ++ + LL N V +F
Sbjct: 152 WADLWNPEYKGKVLLTSDSREVFHVALLLDGKSPNTTNEEEIKAAYERLVKLLPN-VAVF 210
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + G+V + + W+ A K +A V PK GA W D +AIP +++
Sbjct: 211 NSDSPEVPYVQGEVSLGMIWNGSGYLAHKENDKIAFVYPKEGAIFWMDNYAIPKSAK 267
>gi|271500855|ref|YP_003333880.1| family 1 extracellular solute-binding protein [Dickeya dadantii
Ech586]
gi|270344410|gb|ACZ77175.1| extracellular solute-binding protein family 1 [Dickeya dadantii
Ech586]
Length = 369
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV+ A R N++ +PK GA + D+
Sbjct: 219 NIRYFHSSQYINDLANGDICVAIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDV 278
Query: 106 WAIPAASR 113
+AIP ++
Sbjct: 279 FAIPKDAK 286
>gi|251789985|ref|YP_003004706.1| putrescine ABC transporter subunit periplasmic-binding protein
[Dickeya zeae Ech1591]
gi|247538606|gb|ACT07227.1| extracellular solute-binding protein family 1 [Dickeya zeae
Ech1591]
Length = 369
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV+ A R N++ +PK GA + D+
Sbjct: 219 NIRYFHSSQYINDLANGDICVAIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDV 278
Query: 106 WAIPAASR 113
+AIP ++
Sbjct: 279 FAIPKDAK 286
>gi|94499306|ref|ZP_01305844.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Bermanella marisrubri]
gi|94428938|gb|EAT13910.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Oceanobacter sp. RED65]
Length = 361
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 43 QQNLALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPK 96
++ + + + +R F + Y+ GD+ +A+GWS DV A R +A +PK
Sbjct: 204 EEKMLSIRDNIRYFHSSRYISDLANGDLCVAIGWSGDVFQAAARAEEAENGVEIAYYIPK 263
Query: 97 SGASLWADLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ 139
G ++W+D+ AIP ++ H+WI + L
Sbjct: 264 EGTAMWSDMMAIPKDAK------------NVEQAHKWINYILD 294
>gi|383778932|ref|YP_005463498.1| putative ABC transporter substrate-binding protein [Actinoplanes
missouriensis 431]
gi|381372164|dbj|BAL88982.1| putative ABC transporter substrate-binding protein [Actinoplanes
missouriensis 431]
Length = 403
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 11 DLWLPELAGRISMVNSPREV--IGTQAA------AGRIAVQQNLALLGNQ-----VRLFD 57
DLW P G++ M +E+ G AA +G ++ A L Q VR +
Sbjct: 190 DLWDPAFKGKVGMFRDLQELGNFGLLAAGIKPGESGEAEWKKAAAKLREQKDAGIVRQYY 249
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLWAIP 109
Y+ G G+VWI WS D+ V ++ VVP+ G ++W D IP
Sbjct: 250 DQTYIDALGKGEVWITQAWSGDIFQKNVSDGTDFKFVVPEEGGTIWTDNMTIP 302
>gi|385792494|ref|YP_005825470.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676640|gb|AEB27510.1| Putrescine ABC transporter putrescine-binding protein potF
[Francisella cf. novicida Fx1]
Length = 380
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGTQAAAGRIAVQQN---------LALLGN---QVRLFDRTHYLKVFGIG 68
+S+++ P ++ G I N L ++ N ++ FD Y F G
Sbjct: 178 VSLLDEPEQIFGNYFFYHGIDPNTNSKAEYEKAALDIIKNVRPYIKYFDSNKYQNDFTAG 237
Query: 69 DVWIAVGWSSDVLPAVKRMSNV------AVVVPKSGASLWADLWAIPAASR 113
++ + +G+S DV+ +V+R +V A V+PK G ++W D+ IP ++
Sbjct: 238 NLCLVMGYSGDVVRSVERAKSVNPDVTLAYVIPKEGTNIWFDMLMIPKGAK 288
>gi|242278796|ref|YP_002990925.1| extracellular solute-binding protein [Desulfovibrio salexigens DSM
2638]
gi|242121690|gb|ACS79386.1| extracellular solute-binding protein family 1 [Desulfovibrio
salexigens DSM 2638]
Length = 342
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Query: 11 DLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLFDR 58
DLW PEL G++ + N PREV T A A Q+ L L VR+FD
Sbjct: 148 DLWKPELKGKLLLPNEPREVFALALKLLGYPLNETDPAHIEEAYQK-LKTLIPSVRVFDS 206
Query: 59 THYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ G++ + V ++ + A + ++ V P G +LW D IP ++
Sbjct: 207 DSPKQALLAGEIAVGVVFNGEAFIANQENPDIKYVYPPEGYNLWVDSLCIPKGAK 261
>gi|401678958|ref|ZP_10810908.1| family 1 extracellular solute-binding protein [Enterobacter sp.
SST3]
gi|400213809|gb|EJO44745.1| family 1 extracellular solute-binding protein [Enterobacter sp.
SST3]
Length = 370
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL 163
+A+P A ++ E Q + P + H A V L E ++ P++
Sbjct: 280 FAMPADAKNKDEAYQFLNYLMRPEVIAH----ISDHVYYANGNKASVPLVSEEIRNNPAI 335
Query: 164 DTKLIAGVPPAEILAR 179
PPA++ A+
Sbjct: 336 -------YPPADVFAK 344
>gi|404403552|ref|ZP_10995136.1| putrescine ABC transporter periplasmic protein [Pseudomonas
fuscovaginae UPB0736]
Length = 364
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 18/93 (19%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F+ + Y+ G++ +A G+S D+ A KR ++A V+PK G +LW D+
Sbjct: 215 VTYFNSSKYISDLANGEICVAAGFSGDIFQAKKRAEEAKKGVDIAYVIPKEGGNLWFDML 274
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ 139
AIP + G V+ H +I + LQ
Sbjct: 275 AIP--------KDAGNVKEA----HAFINYLLQ 295
>gi|118497171|ref|YP_898221.1| putrescine ABC transporter periplasmic protein [Francisella
novicida U112]
gi|194323469|ref|ZP_03057246.1| bacterial extracellular solute-binding protein, putative
[Francisella novicida FTE]
gi|208778964|ref|ZP_03246310.1| bacterial extracellular solute-binding protein, putative
[Francisella novicida FTG]
gi|254372537|ref|ZP_04988026.1| hypothetical protein FTCG_00100 [Francisella tularensis subsp.
novicida GA99-3549]
gi|254373999|ref|ZP_04989481.1| putrescine-binding periplasmic protein [Francisella novicida
GA99-3548]
gi|118423077|gb|ABK89467.1| ATP-binding cassette putrescine uptake system, periplasmic protein
[Francisella novicida U112]
gi|151570264|gb|EDN35918.1| hypothetical protein FTCG_00100 [Francisella novicida GA99-3549]
gi|151571719|gb|EDN37373.1| putrescine-binding periplasmic protein [Francisella novicida
GA99-3548]
gi|194322324|gb|EDX19805.1| bacterial extracellular solute-binding protein, putative
[Francisella tularensis subsp. novicida FTE]
gi|208744764|gb|EDZ91062.1| bacterial extracellular solute-binding protein, putative
[Francisella novicida FTG]
Length = 393
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGTQAAAGRIAVQQN---------LALLGN---QVRLFDRTHYLKVFGIG 68
+S+++ P ++ G I N L ++ N ++ FD Y F G
Sbjct: 191 VSLLDEPEQIFGNYFFYHGIDPNTNSKAEYEKAALDIIKNVRPYIKYFDSNKYQNDFTAG 250
Query: 69 DVWIAVGWSSDVLPAVKRMSNV------AVVVPKSGASLWADLWAIPAASR 113
++ + +G+S DV+ +V+R +V A V+PK G ++W D+ IP ++
Sbjct: 251 NLCLVMGYSGDVVRSVERAKSVNPDVTLAYVIPKEGTNIWFDMLMIPKGAK 301
>gi|89256859|ref|YP_514221.1| putrescine-binding periplasmic protein [Francisella tularensis
subsp. holarctica LVS]
gi|115315240|ref|YP_763963.1| putrescine ABC transporter ATP-binding protein [Francisella
tularensis subsp. holarctica OSU18]
gi|169656703|ref|YP_001429098.2| hypothetical protein FTA_1667 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254368135|ref|ZP_04984155.1| putrescine-binding periplasmic protein [Francisella tularensis
subsp. holarctica 257]
gi|254369736|ref|ZP_04985746.1| putrescine-binding periplasmic protein [Francisella tularensis
subsp. holarctica FSC022]
gi|290954341|ref|ZP_06558962.1| hypothetical protein FtulhU_08982 [Francisella tularensis subsp.
holarctica URFT1]
gi|422939154|ref|YP_007012301.1| putrescine ABC transporter periplasmic protein [Francisella
tularensis subsp. holarctica FSC200]
gi|423051230|ref|YP_007009664.1| hypothetical protein F92_08760 [Francisella tularensis subsp.
holarctica F92]
gi|89144690|emb|CAJ80021.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. holarctica LVS]
gi|115130139|gb|ABI83326.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Francisella tularensis subsp.
holarctica OSU18]
gi|134253945|gb|EBA53039.1| putrescine-binding periplasmic protein [Francisella tularensis
subsp. holarctica 257]
gi|157122695|gb|EDO66824.1| putrescine-binding periplasmic protein [Francisella tularensis
subsp. holarctica FSC022]
gi|164551771|gb|ABU62142.2| hypothetical protein FTA_1667 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|407294305|gb|AFT93211.1| ATP-binding cassette putrescine uptake system, periplasmic protein
[Francisella tularensis subsp. holarctica FSC200]
gi|421951952|gb|AFX71201.1| hypothetical protein F92_08760 [Francisella tularensis subsp.
holarctica F92]
Length = 393
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGTQAAAGRIAVQQN---------LALLGN---QVRLFDRTHYLKVFGIG 68
+S+++ P ++ G I N L ++ N ++ FD Y F G
Sbjct: 191 VSLLDEPEQIFGNYFFYHGIDPNTNSKAEYEKAALDIIKNVRPYIKYFDSNKYQNDFTAG 250
Query: 69 DVWIAVGWSSDVLPAVKRMSNV------AVVVPKSGASLWADLWAIPAASR 113
++ + +G+S DV+ +V+R +V A V+PK G ++W D+ IP ++
Sbjct: 251 NLCLVMGYSGDVVRSVERAKSVNPDVTLAYVIPKEGTNIWFDMLMIPKGAK 301
>gi|197104670|ref|YP_002130047.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Phenylobacterium zucineum HLK1]
gi|196478090|gb|ACG77618.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Phenylobacterium zucineum HLK1]
Length = 366
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
VR F + Y++ GD +AVG+S DVL A R + VVPK G+ +W D++
Sbjct: 217 VRKFHSSEYIEALANGDACVAVGYSGDVLQAKARAQEAKTGVALGYVVPKEGSQVWFDVF 276
Query: 107 AIP 109
AIP
Sbjct: 277 AIP 279
>gi|387893506|ref|YP_006323803.1| periplasmic putrescine-binding protein [Pseudomonas fluorescens
A506]
gi|387164504|gb|AFJ59703.1| periplasmic putrescine-binding protein [Pseudomonas fluorescens
A506]
Length = 362
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ G++ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 213 ITYFHSSKYISDLANGNICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLL 272
Query: 107 AIPA 110
AIPA
Sbjct: 273 AIPA 276
>gi|147674149|ref|YP_001216982.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|227117891|ref|YP_002819787.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|146316032|gb|ABQ20571.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|227013341|gb|ACP09551.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
Length = 366
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIG--------TQAAAGRIAVQQNLALLGN---Q 52
N F+ W DLW PEL G++ +++ REV + + G + + A L
Sbjct: 168 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTGDKQIDEAYAELQKLMPN 227
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 228 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 287
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 288 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQDVAPL--- 332
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 333 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 360
>gi|56707623|ref|YP_169519.1| putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110670094|ref|YP_666651.1| putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis FSC198]
gi|187932047|ref|YP_001892032.1| ATP-binding cassette putrescine uptake system, periplasmic protein
[Francisella tularensis subsp. mediasiatica FSC147]
gi|254370140|ref|ZP_04986146.1| putrescine ABC superfamily ATP binding cassette transporter
[Francisella tularensis subsp. tularensis FSC033]
gi|254874443|ref|ZP_05247153.1| putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis MA00-2987]
gi|379716883|ref|YP_005305219.1| Putrescine ABC transporter putrescine-binding protein PotF
[Francisella tularensis subsp. tularensis TIGB03]
gi|379725487|ref|YP_005317673.1| putrescine ABC transporter putrescine-binding protein PotF
[Francisella tularensis subsp. tularensis TI0902]
gi|385794245|ref|YP_005830651.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis NE061598]
gi|421752311|ref|ZP_16189340.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis AS_713]
gi|421754177|ref|ZP_16191156.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis 831]
gi|421755113|ref|ZP_16192066.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis 80700075]
gi|421757902|ref|ZP_16194768.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis 80700103]
gi|421759739|ref|ZP_16196566.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis 70102010]
gi|424675059|ref|ZP_18111971.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis 70001275]
gi|54114341|gb|AAV29804.1| NT02FT1098 [synthetic construct]
gi|56604115|emb|CAG45114.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110320427|emb|CAL08497.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis FSC198]
gi|151568384|gb|EDN34038.1| putrescine ABC superfamily ATP binding cassette transporter
[Francisella tularensis subsp. tularensis FSC033]
gi|187712956|gb|ACD31253.1| ATP-binding cassette putrescine uptake system, periplasmic protein
[Francisella tularensis subsp. mediasiatica FSC147]
gi|254840442|gb|EET18878.1| putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis MA00-2987]
gi|282158780|gb|ADA78171.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis NE061598]
gi|377826936|gb|AFB80184.1| Putrescine ABC transporter putrescine-binding protein PotF
[Francisella tularensis subsp. tularensis TI0902]
gi|377828560|gb|AFB78639.1| Putrescine ABC transporter putrescine-binding protein PotF
[Francisella tularensis subsp. tularensis TIGB03]
gi|409085202|gb|EKM85351.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis 831]
gi|409085476|gb|EKM85617.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis AS_713]
gi|409088987|gb|EKM89042.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis 80700075]
gi|409090118|gb|EKM90141.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis 70102010]
gi|409091438|gb|EKM91436.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis 80700103]
gi|417434314|gb|EKT89273.1| Putrescine-binding periplasmic protein [Francisella tularensis
subsp. tularensis 70001275]
Length = 393
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGTQAAAGRIAVQQN---------LALLGN---QVRLFDRTHYLKVFGIG 68
+S+++ P ++ G I N L ++ N ++ FD Y F G
Sbjct: 191 VSLLDEPEQIFGNYFFYHGIDPNTNSKAEYEKAALDIIKNVRPYIKYFDSNKYQNDFTAG 250
Query: 69 DVWIAVGWSSDVLPAVKRMSNV------AVVVPKSGASLWADLWAIPAASR 113
++ + +G+S DV+ +V+R +V A V+PK G ++W D+ IP ++
Sbjct: 251 NLCLVMGYSGDVVRSVERAKSVNPDVTLAYVIPKEGTNIWFDMLMIPKGAK 301
>gi|329767050|ref|ZP_08258578.1| hypothetical protein HMPREF0428_00275 [Gemella haemolysans M341]
gi|328837775|gb|EGF87400.1| hypothetical protein HMPREF0428_00275 [Gemella haemolysans M341]
Length = 359
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 11/121 (9%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGT--QAAAGRI----AVQQNLA-----LLGNQVR 54
F+ W DLW LA I +++ RE++G Q+ + V NLA LL V+
Sbjct: 155 FEKWNDLWDTRLANNILLIDGAREMMGIALQSEGNSVNDTNEVNLNLAERKLELLHPNVK 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + + W +V +S D + N+ +PK G +LW D IP S+
Sbjct: 215 AINADEKKMLMINNEAWASVVFSGDAKAIMGENENMVYALPKEGTNLWFDNIVIPKTSKN 274
Query: 115 E 115
E
Sbjct: 275 E 275
>gi|56419261|ref|YP_146579.1| spermidine/putrescine ABC transporter substrate-binding protein
[Geobacillus kaustophilus HTA426]
gi|56379103|dbj|BAD75011.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Geobacillus kaustophilus HTA426]
Length = 357
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAA-GRIAVQQNLALLGNQVRLFDRTHYLKVFGI 67
W DLW P L +I +V+ REV+G + G N A L R DR +
Sbjct: 158 WNDLWEPSLRNQILLVDGAREVMGMALNSLGYSLNDTNKAHLQEAKRKLDRLMPNVKAIV 217
Query: 68 GD----------VWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
GD I V WS D + + VVPK G++LW D IP + K
Sbjct: 218 GDEIKLLLANEEAAIGVVWSGDAAEIIAENDKLDYVVPKEGSNLWFDNMVIPKTA----K 273
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARA 143
I G H +I F L A
Sbjct: 274 NIEG--------AHAFINFMLDPKHA 291
>gi|307947450|ref|ZP_07662783.1| putrescine-binding periplasmic protein [Roseibium sp. TrichSKD4]
gi|307769268|gb|EFO28496.1| putrescine-binding periplasmic protein [Roseibium sp. TrichSKD4]
Length = 363
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V+ F + Y+ GD+ +AVGWS DVL A R + V +PK GA +W D
Sbjct: 214 VQKFHSSEYINALANGDICVAVGWSGDVLQARDRAAEADNGVTVEYSIPKEGALMWFDQM 273
Query: 107 AIPA 110
A+PA
Sbjct: 274 AVPA 277
>gi|374308426|ref|YP_005054857.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Filifactor alocis ATCC 35896]
gi|291166751|gb|EFE28797.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Filifactor alocis
ATCC 35896]
Length = 354
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W LW + G I M++S R+ I TQ ++ L VR ++
Sbjct: 158 WNILWNEKYKGDIVMLDSSRDTIAVALLKLGYSINTQNEEELQKAKEELIKQKPLVRSYE 217
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+Y G++ + V W+ D + + ++ +PK G +LW D AIP S+ +T+
Sbjct: 218 VDNYKNSMASGELAMVVTWAGDAMNLMAENEDLEYALPKEGTNLWFDAIAIPVTSKHKTE 277
>gi|118443532|ref|YP_877312.1| extracellular solute-binding protein [Clostridium novyi NT]
gi|118133988|gb|ABK61032.1| Bacterial extracellular solute-binding protein, putative
[Clostridium novyi NT]
Length = 347
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 27/124 (21%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNL--------ALL 49
W LW P+ G+I MV+S R+ I T A +Q L A +
Sbjct: 151 WDALWNPKYKGQILMVDSQRDAIAVALKKLGYSMNTTNKAELEKAKQELIKQKPLVHAYV 210
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G++V+ + + IAV WS D + +K N+ V+PK G++LW D IP
Sbjct: 211 GDEVK--------DLMTDEEGAIAVVWSGDAVTMMKNNKNLRYVIPKEGSNLWFDNMVIP 262
Query: 110 AASR 113
S+
Sbjct: 263 KGSK 266
>gi|365969713|ref|YP_004951274.1| putrescine-binding periplasmic protein [Enterobacter cloacae
EcWSU1]
gi|365748626|gb|AEW72853.1| Putrescine-binding periplasmic protein [Enterobacter cloacae
EcWSU1]
Length = 370
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL 163
+A+P A ++ E Q + P + H A V L E ++ P++
Sbjct: 280 FAMPADAKNKDEAYQFLNYLMRPEVIAH----ISDHVYYANGNKASVPLVSEEIRNNPAI 335
Query: 164 DTKLIAGVPPAEILAR 179
PPA++ A+
Sbjct: 336 -------YPPADVFAK 344
>gi|317047520|ref|YP_004115168.1| family 1 extracellular solute-binding protein [Pantoea sp. At-9b]
gi|316949137|gb|ADU68612.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b]
Length = 369
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 21/142 (14%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ G++ +A+GWS D+L A R + N+A VPK GA + D+
Sbjct: 219 SIRYFHSSQYINDLANGNICVAIGWSGDILQAKDRAAQAKNGVNLAYSVPKQGALAFFDM 278
Query: 106 WAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKP--SL 163
AIP ++ +QW+ F + + ++ P +
Sbjct: 279 MAIPKDAK------------NLDEAYQWLNFIMDPKVIADISNKMNYANGNKASLPLINA 326
Query: 164 DTKLIAGV-PPAEILARCEFLE 184
D + G+ PPA+I+++ L+
Sbjct: 327 DVRNNPGIFPPADIMSKLFVLK 348
>gi|220934438|ref|YP_002513337.1| transcription factor jumonji, JmjC [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995748|gb|ACL72350.1| transcription factor jumonji, JmjC [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 366
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVA------VVVPKSGASLWADLW 106
+R F + Y+ GD+ +A G+S DV+ A R V ++P+ GA LW DL
Sbjct: 217 IRYFHASRYINDLANGDICVAHGYSGDVIQARDRAEEVGRGVEIDYIIPREGAVLWFDLM 276
Query: 107 AIPA 110
AIPA
Sbjct: 277 AIPA 280
>gi|319787665|ref|YP_004147140.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
suwonensis 11-1]
gi|317466177|gb|ADV27909.1| extracellular solute-binding protein family 1 [Pseudoxanthomonas
suwonensis 11-1]
Length = 374
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V+ F + Y+ G +AVGWS D++ A R NVA +PK GA W D+
Sbjct: 225 VQNFHSSQYVSSLANGSTCLAVGWSGDIIQARDRAEEAENGVNVAYSIPKEGAPQWFDML 284
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 285 AIPADAK 291
>gi|255521833|ref|ZP_05389070.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL
J1-175]
Length = 287
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 48/220 (21%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQ- 44
+ F W L+ PEL +I +++ REV+G QAA ++
Sbjct: 82 DKNFDTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTP 141
Query: 45 NL-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
N+ A++G++++L + + +AV +S + + ++ V+PK G++LW
Sbjct: 142 NVKAIVGDEIKL--------LMADNEAGVAVTFSGEAAEMLSENEDLEYVIPKDGSNLWF 193
Query: 104 DLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVKLPEELL 157
D IP + K + G H++I F L+ A + + T ELL
Sbjct: 194 DNMVIPKTA----KNVDG--------AHKFINFMLKPENAAINAEYVGYATPNAKAVELL 241
Query: 158 KGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
+ S D + P + L E + L + LS Y L
Sbjct: 242 PKEISSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 278
>gi|254877450|ref|ZP_05250160.1| putrescine-binding periplasmic protein [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254843471|gb|EET21885.1| putrescine-binding periplasmic protein [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 393
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGTQAAAGRIAVQQN---------LALLGN---QVRLFDRTHYLKVFGIG 68
+S+++ P ++ G I N L ++ N ++ FD Y F G
Sbjct: 191 VSLLDEPEQIFGNYFFYHGIDPNTNSKAEYEKAALDIIKNVRPYIKYFDSNKYQNDFTAG 250
Query: 69 DVWIAVGWSSDVLPAVKRMSNV------AVVVPKSGASLWADLWAIPAASR 113
++ + +G+S DV+ +V+R V A V+PK G ++W D+ IP ++
Sbjct: 251 NLCLVMGYSGDVVRSVERAKTVNPDVTLAYVIPKEGTNIWFDMLMIPKGAK 301
>gi|418056504|ref|ZP_12694557.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans 1NES1]
gi|353209723|gb|EHB75126.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans 1NES1]
Length = 370
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 106
++ F + Y+ GD+ IAVG+S D+L A K +A +PK GA +W D
Sbjct: 221 IQKFHSSEYINALANGDICIAVGYSGDILQARSRAEEAKNGQEIAYSLPKQGAQMWFDEM 280
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 281 AIPADAK 287
>gi|255029864|ref|ZP_05301815.1| spermidine/putrescine-binding protein [Listeria monocytogenes LO28]
Length = 296
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 48/220 (21%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQ- 44
+ F W L+ PEL +I +++ REV+G QAA ++
Sbjct: 91 DKNFDTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTP 150
Query: 45 NL-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
N+ A++G++++L + + +AV +S + + ++ V+PK G++LW
Sbjct: 151 NVKAIVGDEIKL--------LMADNEAGVAVTFSGEAAEMLSENEDLEYVIPKDGSNLWF 202
Query: 104 DLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVKLPEELL 157
D IP + K + G H++I F L+ A + + T ELL
Sbjct: 203 DNMVIPKTA----KNVDGA--------HKFINFMLKPENAAINAEYVGYATPNAKAVELL 250
Query: 158 KGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
+ S D + P + L E + L + LS Y L
Sbjct: 251 PKEISSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 287
>gi|262275716|ref|ZP_06053525.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Grimontia hollisae CIP 101886]
gi|262219524|gb|EEY70840.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Grimontia hollisae CIP 101886]
Length = 346
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 26/205 (12%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREV-------IGTQAAAGR----IAVQQNLALL 49
M+++ W DLW PE G++ M++ RE +G A + A + L +
Sbjct: 141 MDKSTVNAWADLWNPEYKGQLLMMDDAREFFHIALRKLGYSANSTNPDEIKAAYEELKKI 200
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
V +F+ + G+V + + W+ A + V +V P+ GA W D AIP
Sbjct: 201 MPNVLVFNSDFPANPYMAGEVALGMLWNGSAYIARSEGAPVDIVWPEEGAIFWMDSLAIP 260
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIA 169
+ K + H+ I+F L+ A ++ P + P L
Sbjct: 261 TTA----KNVDAA--------HKMIDFLLRPENAARLAMKIGYPTPVKAAYPLLPKAFKD 308
Query: 170 G---VPPAEILARCEFLEPLSEATL 191
PP E++ + E+ + EA +
Sbjct: 309 DPSIYPPQEVMEKGEWQSSVGEANV 333
>gi|167626482|ref|YP_001676982.1| putrescine ABC transporter periplasmic protein [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|167596483|gb|ABZ86481.1| ATP-binding cassette putrescine uptake system, periplasmic protein
[Francisella philomiragia subsp. philomiragia ATCC
25017]
Length = 395
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGTQAAAGRIAVQQN---------LALLGN---QVRLFDRTHYLKVFGIG 68
+S+++ P ++ G I N L ++ N ++ FD Y F G
Sbjct: 191 VSLLDEPEQIFGNYFFYHGIDPNTNSKAEYEKAALDIIKNVRPYIKYFDSNKYQNDFTAG 250
Query: 69 DVWIAVGWSSDVLPAVKRMSNV------AVVVPKSGASLWADLWAIPAASR 113
++ + +G+S DV+ +V+R V A V+PK G ++W D+ IP ++
Sbjct: 251 NLCLVMGYSGDVVRSVERAKTVNPDVTLAYVIPKEGTNIWFDMLMIPKGAK 301
>gi|22126728|ref|NP_670151.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis KIM10+]
gi|45441089|ref|NP_992628.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis biovar Microtus str. 91001]
gi|21959748|gb|AAM86402.1|AE013887_9 periplasmic putrescine-binding protein of putrescine ABC
transporter [Yersinia pestis KIM10+]
gi|45435948|gb|AAS61505.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
biovar Microtus str. 91001]
Length = 408
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +AVGW+ D++ A R NVA +PK GA + D+
Sbjct: 258 NIRYFHSSQYINDLANGDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDV 317
Query: 106 WAIPAASR 113
+A+P ++
Sbjct: 318 FAMPTDAK 325
>gi|398992661|ref|ZP_10695625.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398136670|gb|EJM25751.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 365
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ GD+ IA+G+S D+ A R NVA +PK G +LW D+
Sbjct: 216 VTYFHSSKYIADLANGDICIAIGFSGDMFQAKARAEEAGKGVNVAYTIPKEGGALWFDML 275
Query: 107 AIPAAS 112
AIP S
Sbjct: 276 AIPKDS 281
>gi|375335501|ref|ZP_09776845.1| extracellular solute-binding protein [Succinivibrionaceae bacterium
WG-1]
Length = 367
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 22/124 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVIGTQAA-----------AGRIAVQQNLALLGNQ 52
W ++ PE + ++++N+P E+I T ++ L +
Sbjct: 158 WDLIFKPENLSKMKDCGVAVLNAPTEIIATAMHYLGLPNQPMDIKAYAPAEELLMKMREN 217
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +++GWS D+L A R ++ VVPK GA ++ D+
Sbjct: 218 VTYFHSSQYINDMANGDICLSIGWSGDMLQAASRAEEANNGVHLDYVVPKEGALIFFDML 277
Query: 107 AIPA 110
AIPA
Sbjct: 278 AIPA 281
>gi|312960500|ref|ZP_07775007.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens WH6]
gi|311285234|gb|EFQ63808.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens WH6]
Length = 362
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ G++ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 213 ITYFHSSKYISDLANGNICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLL 272
Query: 107 AIPA 110
AIPA
Sbjct: 273 AIPA 276
>gi|290893772|ref|ZP_06556752.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J2-071]
gi|404407260|ref|YP_006689975.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2376]
gi|290556721|gb|EFD90255.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J2-071]
gi|404241409|emb|CBY62809.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2376]
Length = 357
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 48/220 (21%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQ- 44
+ F W L+ PEL +I +++ REV+G QAA ++
Sbjct: 152 DKNFDTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTP 211
Query: 45 NL-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
N+ A++G++++L + + +AV +S + + ++ V+PK G++LW
Sbjct: 212 NVKAIVGDEIKL--------LMADNEAGVAVTFSGEAAEMLSENEDLEYVIPKDGSNLWF 263
Query: 104 DLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVKLPEELL 157
D IP + K I G H++I F L+ A + + T + +LL
Sbjct: 264 DNMVIPKTA----KNIDGA--------HKFINFMLKPENAAINAEYVGYATPNEKAVQLL 311
Query: 158 KGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
+ S D + P + L E + L + LS Y L
Sbjct: 312 PKEISSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 348
>gi|88861147|ref|ZP_01135781.1| periplasmic putrescine-binding protein [Pseudoalteromonas tunicata
D2]
gi|88816869|gb|EAR26690.1| periplasmic putrescine-binding protein [Pseudoalteromonas tunicata
D2]
Length = 365
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADL 105
++ F + Y+ GD +A G+S D+L A R + VA VVP GA +W D+
Sbjct: 215 HIKYFHSSQYINDLANGDSCVAHGYSGDLLQARDRAAEANNGVEVAYVVPSEGAVVWTDV 274
Query: 106 WAIPAASR 113
AIPA S+
Sbjct: 275 MAIPADSK 282
>gi|388601318|ref|ZP_10159714.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio campbellii DS40M4]
Length = 343
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 42/206 (20%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W+DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWEDLWKPELEGQVMLMDDTREVFHIALRKLGYSGNSTDPKQIDEASAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A N+ +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGMNLKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVP 172
+ H+ I+F L R ++ E++ S DT + V
Sbjct: 265 K------------NVEAAHKMIDFLL----------RPEIAEQI-----SADTGYLTAV- 296
Query: 173 PAEILARCEFLEPL--SEATLSDYEW 196
AE A+ + + PL S+ L EW
Sbjct: 297 -AESNAKFKDVAPLFPSQEDLDRVEW 321
>gi|288905425|ref|YP_003430647.1| spermidine/putrescine ABC transporter substrate-binding protein
[Streptococcus gallolyticus UCN34]
gi|325978415|ref|YP_004288131.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|386337870|ref|YP_006034039.1| spermidine/putrescine transport system substrate-binding protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
43143]
gi|288732151|emb|CBI13716.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
gallolyticus UCN34]
gi|325178343|emb|CBZ48387.1| potD [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|334280506|dbj|BAK28080.1| spermidine/putrescine transport system substrate-binding protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
43143]
Length = 357
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 80/210 (38%), Gaps = 24/210 (11%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALL 49
M EN + W DLW E A I +V+ REV+G T++ + A Q L L
Sbjct: 150 MVENAPEHWSDLWNSEYANDIMLVDGAREVMGVGLGTLGYSLNTKSLSELNAASQKLDDL 209
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
++ GD I V +S + + ++ VVP G++LW D IP
Sbjct: 210 TPNIKAIVGDEMKGYMINGDAAIGVTFSGEASEMLDSNEHLHYVVPSEGSNLWFDNLVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKPSLDTKL 167
++ + + I+ + E Q A + ++T +ELL D
Sbjct: 270 KTAK--------HIDEAYAFINFMLRPENAAQNAEYIGYSTPNDAAKELLPDDVKNDQ-- 319
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWL 197
A P E + E + L + L Y L
Sbjct: 320 -AFYPSEETIENLEVYDNLGQKWLGIYNDL 348
>gi|254993330|ref|ZP_05275520.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL
J2-064]
Length = 357
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 48/220 (21%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQ- 44
+ F W L+ PEL +I +++ REV+G QAA ++
Sbjct: 152 DKNFDTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTP 211
Query: 45 NL-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
N+ A++G++++L + + +AV +S + + ++ V+PK G++LW
Sbjct: 212 NVKAIVGDEIKL--------LMADNEAGVAVTFSGEAAEMLSENEDLEYVIPKDGSNLWF 263
Query: 104 DLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVKLPEELL 157
D IP + K + G H++I F L+ A + + T ELL
Sbjct: 264 DNMVIPKTA----KNVDGA--------HKFINFMLKPENAAINAEYVGYATPNAKAVELL 311
Query: 158 KGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
+ S D + P + L E + L + LS Y L
Sbjct: 312 PKEISSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 348
>gi|291454443|ref|ZP_06593833.1| ABC transporter solute-binding protein [Streptomyces albus J1074]
gi|291357392|gb|EFE84294.1| ABC transporter solute-binding protein [Streptomyces albus J1074]
Length = 396
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 13/117 (11%)
Query: 10 KDLWLPELAGRISMVNSPREVIG-------------TQAAAGRIAVQQNLALLGNQVRLF 56
DLW +L GR+++++ E T R+ + + +RLF
Sbjct: 191 SDLWAEDLRGRVTLLSGMDEAFALLLQGDGVDIARWTADDFHRMCDRVEGLVRAGHIRLF 250
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
Y+K GDV +S DV+ ++ VVP+ GA LWA+ IP +R
Sbjct: 251 TGNDYIKDLAAGDVLACQAYSGDVIQLQNDDPDIEFVVPEEGAELWAESLMIPNLAR 307
>gi|326204713|ref|ZP_08194568.1| extracellular solute-binding protein family 1 [Clostridium
papyrosolvens DSM 2782]
gi|325985084|gb|EGD45925.1| extracellular solute-binding protein family 1 [Clostridium
papyrosolvens DSM 2782]
Length = 349
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 43/209 (20%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQNL--ALL 49
W LW + +I M++S R+ I + A + Q+++ A +
Sbjct: 153 WNILWDKKYDKQIFMLDSQRDSIAVALKKLGYSLNTKNKAELEKAKNELIKQKDIVQAYV 212
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G++V+ D+ +G+ +AV WS D + + ++ +PK G++LW D IP
Sbjct: 213 GDEVK--DK------MIMGEGALAVVWSGDAVYMKNQNKDLEYAIPKEGSNLWFDSMVIP 264
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKL-- 167
+ ++ + + ++I F T AL + + K LD L
Sbjct: 265 STAKHQKEA------------EEFINFMCDTEIALKNTNYIGYSTPQTEVKKKLDPALLK 312
Query: 168 -IAGVPPAEILARCEFLEPLSEATLSDYE 195
IA P E + CE L +A++ DY+
Sbjct: 313 DIAAYPSEEQMKGCEVFVDL-DASIKDYD 340
>gi|337755781|ref|YP_004648292.1| putrescine ABC transporter putrescine-binding protein PotF
[Francisella sp. TX077308]
gi|336447386|gb|AEI36692.1| Putrescine ABC transporter putrescine-binding protein PotF
[Francisella sp. TX077308]
Length = 395
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGTQAAAGRIAVQQN---------LALLGN---QVRLFDRTHYLKVFGIG 68
+S+++ P ++ G I N L ++ N ++ FD Y F G
Sbjct: 191 VSLLDEPEQIFGNYFYYHGIDPNTNSKAEYEKAALDIIKNIRPYIKYFDSNKYQNDFTAG 250
Query: 69 DVWIAVGWSSDVLPAVKRMSNV------AVVVPKSGASLWADLWAIPAASR 113
++ + +G+S DV+ +V+R + A V+PK G ++W D+ IP ++
Sbjct: 251 NLCLVMGYSGDVVRSVERAKTINPDVTLAYVIPKEGTNIWFDMLMIPKGAK 301
>gi|386727089|ref|YP_006193415.1| extracellular solute-binding protein [Paenibacillus mucilaginosus
K02]
gi|384094214|gb|AFH65650.1| extracellular solute-binding protein family 1 [Paenibacillus
mucilaginosus K02]
Length = 358
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 48/217 (22%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGT------------------QAAAGRIAVQQNL- 46
F W DLW +L +I +V+ REV+G +A A + N+
Sbjct: 156 FTSWNDLWDEKLENQILLVDGAREVMGMGLNSLGYSLNDRDEAHLQEAKAKLDTLTPNVK 215
Query: 47 ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 106
A++G+++++ + + + V WS D + + VVP+ G++LW D
Sbjct: 216 AIVGDEIKM--------LLANEEAAVGVVWSGDASEIMDENDKLDYVVPEEGSNLWFDNM 267
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGK 160
IP + + G H +I F L Q A + ++T + E L +
Sbjct: 268 VIPKTAH--------NIEGA----HAFINFMLDPEVAAQNAEYVGYSTPNESALEFLPEE 315
Query: 161 PSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
S D + P + + E E L + LS Y L
Sbjct: 316 ISGDKRF---YPDPGLTEKLEVYENLGKRMLSHYNEL 349
>gi|16802852|ref|NP_464337.1| hypothetical protein lmo0810 [Listeria monocytogenes EGD-e]
gi|46907040|ref|YP_013429.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes serotype 4b str. F2365]
gi|47094815|ref|ZP_00232429.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 1/2a F6854]
gi|226223427|ref|YP_002757534.1| spermidine/putrescine-binding protein [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254823923|ref|ZP_05228924.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J1-194]
gi|254828893|ref|ZP_05233580.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
N3-165]
gi|254853773|ref|ZP_05243121.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-503]
gi|254911493|ref|ZP_05261505.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J2818]
gi|254931190|ref|ZP_05264549.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
HPB2262]
gi|254935819|ref|ZP_05267516.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
F6900]
gi|284801140|ref|YP_003413005.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578]
gi|284994282|ref|YP_003416050.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923]
gi|300765116|ref|ZP_07075103.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes FSL N1-017]
gi|386043137|ref|YP_005961942.1| spermidine/putrescine transport system substrate-binding protein
[Listeria monocytogenes 10403S]
gi|386046472|ref|YP_005964804.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J0161]
gi|386049737|ref|YP_005967728.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-561]
gi|386053073|ref|YP_005970631.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
Finland 1998]
gi|386731563|ref|YP_006205059.1| extracellular solute-binding protein [Listeria monocytogenes
07PF0776]
gi|404280362|ref|YP_006681260.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2755]
gi|404283250|ref|YP_006684147.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2372]
gi|404286220|ref|YP_006692806.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes serotype 7 str. SLCC2482]
gi|404410049|ref|YP_006695637.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC5850]
gi|404412893|ref|YP_006698480.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC7179]
gi|405749162|ref|YP_006672628.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes ATCC 19117]
gi|405752027|ref|YP_006675492.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2378]
gi|405754888|ref|YP_006678352.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2540]
gi|405757805|ref|YP_006687081.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2479]
gi|406703584|ref|YP_006753938.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes L312]
gi|417317055|ref|ZP_12103681.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1-220]
gi|424713687|ref|YP_007014402.1| Spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes serotype 4b str. LL195]
gi|424822534|ref|ZP_18247547.1| periplasmic protein (SPBP) [Listeria monocytogenes str. Scott A]
gi|16410199|emb|CAC98888.1| lmo0810 [Listeria monocytogenes EGD-e]
gi|46880306|gb|AAT03606.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|47016697|gb|EAL07616.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 1/2a F6854]
gi|225875889|emb|CAS04593.1| Putative spermidine/putrescine-binding protein [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258601306|gb|EEW14631.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
N3-165]
gi|258607153|gb|EEW19761.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-503]
gi|258608406|gb|EEW21014.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
F6900]
gi|284056702|gb|ADB67643.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578]
gi|284059749|gb|ADB70688.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923]
gi|293582738|gb|EFF94770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
HPB2262]
gi|293589436|gb|EFF97770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J2818]
gi|293593149|gb|EFG00910.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J1-194]
gi|300514241|gb|EFK41301.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes FSL N1-017]
gi|328475514|gb|EGF46273.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1-220]
gi|332311214|gb|EGJ24309.1| periplasmic protein (SPBP) [Listeria monocytogenes str. Scott A]
gi|345533463|gb|AEO02904.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J0161]
gi|345536371|gb|AEO05811.1| spermidine/putrescine transport system substrate-binding protein
[Listeria monocytogenes 10403S]
gi|346423583|gb|AEO25108.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-561]
gi|346645724|gb|AEO38349.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
Finland 1998]
gi|384390321|gb|AFH79391.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes 07PF0776]
gi|404218362|emb|CBY69726.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes ATCC 19117]
gi|404221227|emb|CBY72590.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2378]
gi|404224088|emb|CBY75450.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2540]
gi|404226997|emb|CBY48402.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2755]
gi|404229875|emb|CBY51279.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC5850]
gi|404232752|emb|CBY54155.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2372]
gi|404235687|emb|CBY57089.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2479]
gi|404238592|emb|CBY59993.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC7179]
gi|404245149|emb|CBY03374.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes serotype 7 str. SLCC2482]
gi|406360614|emb|CBY66887.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes L312]
gi|424012871|emb|CCO63411.1| Spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes serotype 4b str. LL195]
Length = 357
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 48/220 (21%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQ- 44
+ F W L+ PEL +I +++ REV+G QAA ++
Sbjct: 152 DKNFDTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTP 211
Query: 45 NL-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
N+ A++G++++L + + +AV +S + + ++ V+PK G++LW
Sbjct: 212 NVKAIVGDEIKL--------LMADNEAGVAVTFSGEAAEMLSENEDLEYVIPKDGSNLWF 263
Query: 104 DLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVKLPEELL 157
D IP + K + G H++I F L+ A + + T ELL
Sbjct: 264 DNMVIPKTA----KNVDGA--------HKFINFMLKPENAAINAEYVGYATPNAKAVELL 311
Query: 158 KGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
+ S D + P + L E + L + LS Y L
Sbjct: 312 PKEISSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 348
>gi|334315175|ref|YP_004547794.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti AK83]
gi|384534820|ref|YP_005718905.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
SM11]
gi|407719548|ref|YP_006839210.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
Rm41]
gi|418399937|ref|ZP_12973482.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti CCNWSX0020]
gi|334094169|gb|AEG52180.1| extracellular solute-binding protein family 1 [Sinorhizobium
meliloti AK83]
gi|336031712|gb|AEH77644.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
SM11]
gi|359506054|gb|EHK78571.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti CCNWSX0020]
gi|407317780|emb|CCM66384.1| Putrescine-binding periplasmic protein [Sinorhizobium meliloti
Rm41]
Length = 364
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 8 DWKDLWLPELAGR-----ISMVNSPREVIGTQAA--------AGRIAVQQNLALLGN--- 51
+W ++ PE+A + I +++SP +++ + A + +++ LL
Sbjct: 154 NWDVIFDPEIAAKFKDCGIHLLDSPTDIMPSALAYLGLNPDSHDQADLEKAADLLMKVRP 213
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +AVG+S DV A R + V +P+ GA +W D+
Sbjct: 214 NIRKFHSSEYINALANGDICLAVGFSGDVFQARDRAAEAKAGVTVDYSIPEQGAQMWFDM 273
Query: 106 WAIPA 110
AIPA
Sbjct: 274 LAIPA 278
>gi|239991118|ref|ZP_04711782.1| putative polyamine ABC transporter substrate-binding protein
[Streptomyces roseosporus NRRL 11379]
Length = 387
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 11 DLWLPELAGRISMVNSPREVIG-------------TQAAAGRIAVQQNLALLGNQVRLFD 57
DLW +L GR+++++ E T I Q + +R F
Sbjct: 183 DLWADDLRGRVTLLSGLDESFALLMQGNGVDITRWTADDFHEICEQTEKRVRSKHIRRFT 242
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
Y+K GDV +S DV+ ++ VVP+ GA LWA+ IP +R
Sbjct: 243 GNDYIKDLATGDVLACQAYSGDVIQLQADNPDIEFVVPEEGAELWAESLMIPNLAR 298
>gi|291448117|ref|ZP_06587507.1| ABC transporter solute-binding protein [Streptomyces roseosporus
NRRL 15998]
gi|291351064|gb|EFE77968.1| ABC transporter solute-binding protein [Streptomyces roseosporus
NRRL 15998]
Length = 395
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 11 DLWLPELAGRISMVNSPREVIG-------------TQAAAGRIAVQQNLALLGNQVRLFD 57
DLW +L GR+++++ E T I Q + +R F
Sbjct: 191 DLWADDLRGRVTLLSGLDESFALLMQGNGVDITRWTADDFHEICEQTEKRVRSKHIRRFT 250
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
Y+K GDV +S DV+ ++ VVP+ GA LWA+ IP +R
Sbjct: 251 GNDYIKDLATGDVLACQAYSGDVIQLQADNPDIEFVVPEEGAELWAESLMIPNLAR 306
>gi|87303042|ref|ZP_01085846.1| hypothetical protein WH5701_07706 [Synechococcus sp. WH 5701]
gi|87282538|gb|EAQ74497.1| hypothetical protein WH5701_07706 [Synechococcus sp. WH 5701]
Length = 355
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRL 55
+ W L P L G + + +SPR VI G +A+ G + + L+ L Q
Sbjct: 156 EGWSLLLDPSLRGELLLPSSPRLVIDLALRQLGLPPGDRASLGDLRLGDQLSRLRRQAAA 215
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
FD L + G V AV S VLP ++ + + ++P SG++LW +L PA +
Sbjct: 216 FDDRDGLNLLLSGRVEAAVLPSQRVLPLLRSDTRLTALLPASGSALWWNLLLRPA----Q 271
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRV-------KLPEELLKGKPSLDTKLI 168
T+++ + + LQ AR +P R+ L ELL S +
Sbjct: 272 TREVPP------------LRWLLQ-AREMPLLNRLLAAGWVPPLRRELLAAALSSWPPAV 318
Query: 169 AGV--PPAEILARCEFLEPLSE 188
A + P +LARC L PL+E
Sbjct: 319 AALLYPQPAVLARCTSLPPLAE 340
>gi|15964467|ref|NP_384820.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
1021]
gi|384528421|ref|YP_005712509.1| extracellular solute-binding protein [Sinorhizobium meliloti
BL225C]
gi|433612474|ref|YP_007189272.1| Spermidine/putrescine-binding periplasmic protein [Sinorhizobium
meliloti GR4]
gi|15073644|emb|CAC45286.1| Probable putrescine-binding periplasmic protein [Sinorhizobium
meliloti 1021]
gi|333810597|gb|AEG03266.1| extracellular solute-binding protein family 1 [Sinorhizobium
meliloti BL225C]
gi|429550664|gb|AGA05673.1| Spermidine/putrescine-binding periplasmic protein [Sinorhizobium
meliloti GR4]
Length = 364
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 8 DWKDLWLPELAGR-----ISMVNSPREVIGTQAA--------AGRIAVQQNLALLGN--- 51
+W ++ PE+A + I +++SP +++ + A + +++ LL
Sbjct: 154 NWDVIFDPEIAAKFKDCGIHLLDSPTDIMPSALAYLGLNPDSHDQADLEKAADLLMKVRP 213
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +AVG+S DV A R + V +P+ GA +W D+
Sbjct: 214 NIRKFHSSEYINALANGDICLAVGFSGDVFQARDRAAEAKAGVTVDYSIPEQGAQMWFDM 273
Query: 106 WAIPA 110
AIPA
Sbjct: 274 LAIPA 278
>gi|299133628|ref|ZP_07026822.1| extracellular solute-binding protein family 1 [Afipia sp. 1NLS2]
gi|298591464|gb|EFI51665.1| extracellular solute-binding protein family 1 [Afipia sp. 1NLS2]
Length = 363
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
VR F + YL G++ +AVGWS D+ A KR + +A +PK GA ++ D
Sbjct: 214 VRKFHSSEYLSALATGEICLAVGWSGDIKQAQKRAAESNNGVEIAYAIPKEGAQMFFDNL 273
Query: 107 AIPAASR 113
AIP+ ++
Sbjct: 274 AIPSDAK 280
>gi|423113485|ref|ZP_17101176.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5245]
gi|376388854|gb|EHT01547.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5245]
Length = 370
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 23/138 (16%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIH--QWIEFCLQTARALPFNTRVKLPEELLKGKP 161
+A+P A ++ E Q + P + H + + + P L E ++ P
Sbjct: 280 FAMPADAKNKEEAYQFLNYLMRPDVIAHISDHVYYANGNKASTP------LVSEAIRSNP 333
Query: 162 SLDTKLIAGVPPAEILAR 179
++ PPA++ A+
Sbjct: 334 AI-------YPPADVFAK 344
>gi|365863749|ref|ZP_09403454.1| putative polyamine ABC transporter substrate-binding protein
[Streptomyces sp. W007]
gi|364006788|gb|EHM27823.1| putative polyamine ABC transporter substrate-binding protein
[Streptomyces sp. W007]
Length = 364
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 11 DLWLPELAGRISMVNSPREVIG-------------TQAAAGRIAVQQNLALLGNQVRLFD 57
DLW +L GR+++++ E T I Q + +R F
Sbjct: 160 DLWADDLRGRVTLLSGLDESFALLMQGNGVDITRWTADDFHEICEQTQKRVRSKHIRRFT 219
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
Y+K GDV +S DV+ ++ VVP+ GA LWA+ IP +R
Sbjct: 220 GNDYIKDLATGDVLACQAYSGDVIQLQADNPDIEFVVPEEGAELWAESLMIPNLAR 275
>gi|260432277|ref|ZP_05786248.1| putrescine-binding periplasmic protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416105|gb|EEX09364.1| putrescine-binding periplasmic protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 361
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
++ F + Y+ GD+ +AVGWS DVL A R +A PK GA +W D
Sbjct: 212 IQKFHSSEYINALANGDICVAVGWSGDVLQARDRADEADNGVTIAYHAPKEGAQMWFDQM 271
Query: 107 AIP 109
AIP
Sbjct: 272 AIP 274
>gi|163758096|ref|ZP_02165184.1| probable putrescine-binding periplasmic protein [Hoeflea
phototrophica DFL-43]
gi|162284385|gb|EDQ34668.1| probable putrescine-binding periplasmic protein [Hoeflea
phototrophica DFL-43]
Length = 353
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 21/143 (14%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
VR + + Y+ GD+ +AVGWS D+L A R + VA +PK GA +W D
Sbjct: 203 NVRKYHSSEYINALANGDICLAVGWSGDILQARDRAAEADAGVTVAYEIPKEGALMWFDN 262
Query: 106 WAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
AIP+ ++ + H+++ + ++ + V L KP L+
Sbjct: 263 MAIPSDAKNVAEA------------HEFLNYIMKPEVMAKASNYVYYANGNLASKPFLNE 310
Query: 166 KLIAGV---PPAEILARCEFLEP 185
+I P E + R + P
Sbjct: 311 DVIGDTAIYPDDETIGRLYTVSP 333
>gi|399001424|ref|ZP_10704138.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
gi|398127546|gb|EJM16953.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
Length = 219
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ G++ +A G+S DV A R N+A +PK G++LW DL
Sbjct: 70 ITYFHSSKYVSDLANGNICVAFGYSGDVFQAANRAKDAKNGVNIAYSIPKEGSNLWFDLL 129
Query: 107 AIPA 110
AIPA
Sbjct: 130 AIPA 133
>gi|336312486|ref|ZP_08567435.1| putrescine ABC transporter putrescine-binding protein PotF
[Shewanella sp. HN-41]
gi|335863992|gb|EGM69110.1| putrescine ABC transporter putrescine-binding protein PotF
[Shewanella sp. HN-41]
Length = 366
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 23/137 (16%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S DV A R + + +PK GA+LW D+
Sbjct: 217 VTYFHSSRYISDLANGDICVAFGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDML 276
Query: 107 AIPA-ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDT 165
AIPA A+ ++ H+ I + L+ P + V +P +D
Sbjct: 277 AIPADATNVDNA-------------HKLINYLLRPDVIAPISNYVAYANPNDPAQPLVDE 323
Query: 166 KLI---AGVPPAEILAR 179
+ A PP E+L +
Sbjct: 324 AIRNDPAIYPPKEVLDK 340
>gi|306831506|ref|ZP_07464664.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|304426291|gb|EFM29405.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
Length = 357
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 80/210 (38%), Gaps = 24/210 (11%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALL 49
M EN + W DLW E A I +V+ REV+G T++ + A Q L L
Sbjct: 150 MVENAPEHWSDLWNSEYANDIMLVDGAREVMGIGLGTLGYSLNTKSLSELNAASQKLDDL 209
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
++ GD I V +S + + ++ VVP G++LW D IP
Sbjct: 210 TPNIKAIVGDEMKGYMINGDAAIGVTFSGEASEMLDSNEHLHYVVPSEGSNLWFDNLVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKPSLDTKL 167
++ + + I+ + E Q A + ++T +ELL D
Sbjct: 270 KTAK--------HIDEAYAFINFMLRPENAAQNAEYIGYSTPNDAAKELLPDDVKNDQ-- 319
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWL 197
A P E + E + L + L Y L
Sbjct: 320 -AFYPSEETIENLEVYDNLGQKWLGIYNDL 348
>gi|118593580|ref|ZP_01550957.1| ABC transporter, polyamine transport protein, periplasmic protein
[Stappia aggregata IAM 12614]
gi|118433798|gb|EAV40458.1| ABC transporter, polyamine transport protein, periplasmic protein
[Stappia aggregata IAM 12614]
Length = 364
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
++ F + Y+ GD+ +AVGWS DVL A R + V +PK GA +W D
Sbjct: 215 IQKFHSSEYINALANGDICLAVGWSGDVLQARDRAAEADNGVTVEYSIPKEGALMWFDQM 274
Query: 107 AIPA 110
AIPA
Sbjct: 275 AIPA 278
>gi|418411544|ref|ZP_12984812.1| hypothetical protein HMPREF9281_00416 [Staphylococcus epidermidis
BVS058A4]
gi|410893088|gb|EKS40879.1| hypothetical protein HMPREF9281_00416 [Staphylococcus epidermidis
BVS058A4]
Length = 357
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 82/215 (38%), Gaps = 34/215 (15%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DL+ + I +V+ RE+IG + +++L L QVR
Sbjct: 155 FDSWDDLYHSQFKNDILLVDGAREIIGMGLNKLGYSLNDKNLTHIHQAEKDLHNLAPQVR 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + +AV WS P V+ + V+PK G++LW D IP ++
Sbjct: 215 GIVGDEITMMLQQNEGHVAVVWSGVAAPLVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ- 273
Query: 115 ETKQIGGRVRGPFPLIHQ-------WIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKL 167
+ G F L Q W+ + A R KLP+++ D +
Sbjct: 274 --NKEGAYKFMNFLLDAQNSAQNTEWVGYATPNKAA-----RSKLPKKVRN-----DYRF 321
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P + R E + L +A+LSDY N +
Sbjct: 322 ---YPSKQEQQRLEVYKDLGQASLSDYNESFLNFK 353
>gi|398844417|ref|ZP_10601481.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398254503|gb|EJN39596.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 312
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 12/111 (10%)
Query: 5 GFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D P + + M PR ++ A + L L + F + Y+
Sbjct: 121 AFMDSPDELFPAILNYMGM--DPR----SEKAGDYAKAEARLLELRPYITYFHSSKYVSD 174
Query: 65 FGIGDVWIAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIP 109
GDV +A G+S DV A R VA +PK G++LW DL AIP
Sbjct: 175 LANGDVCVAFGYSGDVFQAANRAIEAKNGVKVAYSIPKEGSNLWFDLLAIP 225
>gi|375262549|ref|YP_005024779.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio sp. EJY3]
gi|369842977|gb|AEX23805.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio sp. EJY3]
Length = 344
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 80/208 (38%), Gaps = 26/208 (12%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQ-----------QNLALLGNQVRLFD 57
W DLW ++ +++ R+V G +V ++L L N V L++
Sbjct: 147 WADLWDAHYEQQVMLIDDIRDVFGMALKMNGHSVNSKNEAEIKQAYESLVALKNNVLLYN 206
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+ + + W+ + M + V+P GA LW D + IP+ S +
Sbjct: 207 SDAPQVPYVSGETSVGMQWNGNAYQGQVEMPELKFVMPAEGAVLWMDNFTIPSGSENKV- 265
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSL--DTKLIAGVPPAE 175
L H++I F Q + G+ L + K A + PAE
Sbjct: 266 -----------LAHKFINFMYQPQNQAEIVNSLGYASATNAGRNLLPDELKNNATIFPAE 314
Query: 176 -ILARCEFLEPLSEATLSDYEWLVANLQ 202
L + EF+ + TL+ YE NL+
Sbjct: 315 DDLEKGEFINDVGAETLAIYEKYWQNLR 342
>gi|416052558|ref|ZP_11578341.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347991957|gb|EGY33397.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 348
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW PE G++ + + REV T A + L L V +F+
Sbjct: 152 WSDLWNPEYKGKVLLTSDAREVFHVALLLDGKSPNTTNEDEIKAAYERLEKLLPNVAVFN 211
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ G+V + + W+ A + N+ V PK GA W D +AIP +++
Sbjct: 212 SDSPEVPYVQGEVALGMIWNGSAYMAHRENENIQFVYPKEGAIFWMDNYAIPKSAK 267
>gi|423107544|ref|ZP_17095239.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5243]
gi|376388316|gb|EHT01015.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5243]
Length = 370
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 23/138 (16%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIP--AASRLETKQIGGRVRGPFPLIH--QWIEFCLQTARALPFNTRVKLPEELLKGKP 161
+A+P A ++ E Q + P + H + + + P L E ++ P
Sbjct: 280 FAMPADAKNKDEAYQFLNYLMRPDVIAHISDHVYYANGNKASTP------LVSEAIRSNP 333
Query: 162 SLDTKLIAGVPPAEILAR 179
++ PPA++ A+
Sbjct: 334 AI-------YPPADVFAK 344
>gi|257465625|ref|ZP_05629996.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus minor 202]
gi|257451285|gb|EEV25328.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus minor 202]
Length = 359
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 25/169 (14%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
N W DLW E G++ ++N PREV ++ + + L L
Sbjct: 156 NTLSSWGDLWREEYKGKLLLMNDPREVFHIALLLDGKSPNSENEQEIKSAYERLKKLIPN 215
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + G+V + + WS A ++ + PK GA LW D + IP +
Sbjct: 216 VLVFNSDSPEMPYLQGEVSVGMQWSGSAYRAKNENKDLQFIFPKEGAVLWMDNYVIPKGA 275
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLKG 159
K+ H++I+F L ++A+ + +P E +K
Sbjct: 276 V--NKEAA----------HKFIDFLLRPESAKEVIETMGFSMPNEGVKA 312
>gi|423099912|ref|ZP_17087619.1| ABC transporter, solute-binding protein [Listeria innocua ATCC
33091]
gi|370793645|gb|EHN61478.1| ABC transporter, solute-binding protein [Listeria innocua ATCC
33091]
Length = 357
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 48/220 (21%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQ- 44
+ F W L+ PEL +I +++ REV+G QAA ++
Sbjct: 152 DKNFDTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTP 211
Query: 45 NL-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
N+ A++G++++L + + +AV +S + + ++ V+PK G++LW
Sbjct: 212 NVKAIVGDEIKL--------LMADNEAGVAVTFSGEAAEMLSENEDLEYVIPKDGSNLWF 263
Query: 104 DLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVKLPEELL 157
D IP + K I G H++I F L+ A + + T + +LL
Sbjct: 264 DNMVIPKTA----KNIDGA--------HKFINFMLKPENAAINAEYVGYATPNEKAVKLL 311
Query: 158 KGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
+ S D + P + L E + L + LS Y L
Sbjct: 312 PKEISSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 348
>gi|212640642|ref|YP_002317162.1| Spermidine/putrescine transport system substrate-binding protein
[Anoxybacillus flavithermus WK1]
gi|212562122|gb|ACJ35177.1| Spermidine/putrescine transport system substrate-binding protein
[Anoxybacillus flavithermus WK1]
Length = 357
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 50/215 (23%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGT------------------QAAAGRIAVQQNL-ALL 49
W DLW P I + + RE+IG QA A+ N+ A++
Sbjct: 158 WNDLWDPAFKNEILLADGAREIIGMALNSLHYSLNDTNKTHLQQAKQKLDALTPNVKAIV 217
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G+++++ + + I + WS D + + V+PK G +LW D IP
Sbjct: 218 GDEIKM--------LLANEEAAIGIVWSGDAAEIMWENERLDYVIPKEGTNLWFDNMVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSL 163
+ K I G HQ+I F L Q A + ++T K E L +
Sbjct: 270 KTA----KNIEGA--------HQFINFMLDPKNAAQNAEYVGYSTPNKKALEYLPKEVVE 317
Query: 164 DTKLIAGVPPAEILA-RCEFLEPLSEATLSDYEWL 197
D + P E LA + E E L ++ L+ Y L
Sbjct: 318 DERFY----PGEKLANKLEVYENLGKSMLAYYNEL 348
>gi|387120968|ref|YP_006286851.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|415756792|ref|ZP_11481152.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans D17P-3]
gi|416049453|ref|ZP_11576594.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|416061192|ref|ZP_11581077.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype e str.
SCC393]
gi|416071784|ref|ZP_11583943.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|347991456|gb|EGY32921.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|347997820|gb|EGY38781.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype e str.
SCC393]
gi|347998415|gb|EGY39344.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|348655660|gb|EGY71102.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans D17P-3]
gi|385875460|gb|AFI87019.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 348
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ + + REV T + A ++ LL N V +F
Sbjct: 152 WSDLWNPEYKGKVLLTSDAREVFHVALLLDGKSPNTTNEDEIKAAYERLEKLLPN-VAVF 210
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + G+V + + W+ A + N+ V PK GA W D +AIP +++
Sbjct: 211 NSDSPEVPYVQGEVALGMIWNGSAYMAHRENKNIQFVYPKEGAIFWMDNYAIPKSAK 267
>gi|261867034|ref|YP_003254956.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|415768715|ref|ZP_11483904.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans D17P-2]
gi|261412366|gb|ACX81737.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|348657749|gb|EGY75332.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans D17P-2]
Length = 348
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ + + REV T + A ++ LL N V +F
Sbjct: 152 WSDLWNPEYKGKVLLTSDAREVFHVALLLDGKSPNTTNEDEIKAAYERLEKLLPN-VAVF 210
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + G+V + + W+ A + N+ V PK GA W D +AIP +++
Sbjct: 211 NSDSPEVPYVQGEVALGMIWNGSAYMAHRENENIQFVYPKEGAIFWMDNYAIPKSAK 267
>gi|260429146|ref|ZP_05783123.1| putrescine-binding periplasmic protein [Citreicella sp. SE45]
gi|260419769|gb|EEX13022.1| putrescine-binding periplasmic protein [Citreicella sp. SE45]
Length = 362
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
++ F+ + Y+ GD+ +AVGWS D+L A R + ++ P GA +W D+
Sbjct: 213 IQKFNSSEYINALANGDICVAVGWSGDILQARDRAAEADNGVEISYYAPDEGAQMWFDMM 272
Query: 107 AIP 109
AIP
Sbjct: 273 AIP 275
>gi|156934649|ref|YP_001438565.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii ATCC BAA-894]
gi|156532903|gb|ABU77729.1| hypothetical protein ESA_02483 [Cronobacter sakazakii ATCC BAA-894]
Length = 393
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T +A A L L +R F + Y+ G
Sbjct: 200 VSFLDAPEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANG 259
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 260 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 310
>gi|70733210|ref|YP_262983.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas protegens Pf-5]
gi|68347509|gb|AAY95115.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas protegens Pf-5]
Length = 364
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 18/93 (19%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ G++ +A+G+S DV A R + N+A +PK G +LW D+
Sbjct: 215 VTYFHSSKYISDLANGNICVAIGFSGDVFQAKARAADAGKGVNIAYAIPKEGGALWFDML 274
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ 139
AIP S KQ H +I + LQ
Sbjct: 275 AIPKDST-NVKQ-----------AHAFINYLLQ 295
>gi|414162976|ref|ZP_11419223.1| hypothetical protein HMPREF9697_01124 [Afipia felis ATCC 53690]
gi|410880756|gb|EKS28596.1| hypothetical protein HMPREF9697_01124 [Afipia felis ATCC 53690]
Length = 363
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
VR F + YL G++ +AVGWS D+ A KR + +A +PK GA ++ D
Sbjct: 214 VRKFHSSEYLSALATGEICLAVGWSGDIKQAQKRAAESNNGVEIAYAIPKEGAQMFFDNL 273
Query: 107 AIPAASR 113
AIP+ ++
Sbjct: 274 AIPSDAK 280
>gi|418326858|ref|ZP_12938035.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU071]
gi|420185169|ref|ZP_14691265.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM040]
gi|365224167|gb|EHM65433.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU071]
gi|394255203|gb|EJE00160.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM040]
Length = 357
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 82/215 (38%), Gaps = 34/215 (15%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DL+ + I +V+ RE+IG + +++L L QVR
Sbjct: 155 FDSWDDLYHSQFKNDILLVDGAREIIGMGLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVR 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + +AV WS P V+ + V+PK G++LW D IP ++
Sbjct: 215 GIVGDEITMMLQQNEGHVAVVWSGVAAPLVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ- 273
Query: 115 ETKQIGGRVRGPFPLIHQ-------WIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKL 167
+ G F L Q W+ + A R KLP+++ D +
Sbjct: 274 --NKEGAYKFMNFLLDAQNSAQNTEWVGYATPNKAA-----RSKLPKKVRN-----DYRF 321
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P + R E + L +A+LSDY N +
Sbjct: 322 ---YPSKQEQQRLEVYKDLGQASLSDYNESFLNFK 353
>gi|407717664|ref|YP_006795069.1| spermidine/putrescine-binding periplasmic protein [Leuconostoc
carnosum JB16]
gi|407241420|gb|AFT81070.1| spermidine/putrescine-binding periplasmic protein [Leuconostoc
carnosum JB16]
Length = 359
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALL 49
+N K W DLW + +I +++S R+V+G T++AA A Q L L
Sbjct: 152 VNAKDIKHWDDLWSTKFRNKIMLIDSARDVLGFTLMTQNKSVNTRSAADLAAAQGKLTTL 211
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
V+ + IA+ +S + A+ S++ +VP G++LW D +P
Sbjct: 212 MPNVKAIVADEIKMYMAQEEAAIAITYSGEAAEAMSNNSHLHYLVPSEGSNLWFDNIVMP 271
Query: 110 AASR 113
++
Sbjct: 272 RTAK 275
>gi|384919869|ref|ZP_10019899.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citreicella sp. 357]
gi|384466255|gb|EIE50770.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citreicella sp. 357]
Length = 361
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 104
+ ++ F+ + Y+ GD+ +AVGWS DVL A R + +A P GA +W D
Sbjct: 210 DHIQKFNSSEYVNALANGDICVAVGWSGDVLQARDRAAEAGNGVEIAYYAPDEGAQMWFD 269
Query: 105 LWAIP 109
AIP
Sbjct: 270 EMAIP 274
>gi|260597254|ref|YP_003209825.1| putrescine ABC transporter periplasmic binding protein [Cronobacter
turicensis z3032]
gi|260216431|emb|CBA29533.1| Putrescine-binding periplasmic protein [Cronobacter turicensis
z3032]
Length = 393
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T +A A L L +R F + Y+ G
Sbjct: 200 VSFLDAPEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANG 259
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 260 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 310
>gi|398871289|ref|ZP_10626605.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398206544|gb|EJM93307.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 365
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A+G+S D+ A K+ N+A +PK G +LW D+
Sbjct: 216 VTYFHSSKYIADLANGDICVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKEGGALWFDML 275
Query: 107 AIPAAS 112
AIP S
Sbjct: 276 AIPKDS 281
>gi|374331995|ref|YP_005082179.1| putrescine-binding periplasmic protein [Pseudovibrio sp. FO-BEG1]
gi|359344783|gb|AEV38157.1| Putrescine-binding periplasmic protein [Pseudovibrio sp. FO-BEG1]
Length = 368
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 22/123 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVIGTQ--------AAAGRIAVQQNLALLGN---Q 52
W+ ++ PE+ + I M+++P E+I + + +++ LL
Sbjct: 159 WEIIFNPEILAKFQDCGIHMLDAPTELIPAALNHLGLNPDSHDKAEIEKAAELLKTIRPY 218
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V+ F + Y+ GD+ +A+GWS DV A R + V ++PK GA +W D
Sbjct: 219 VQKFHSSEYINALANGDICLAIGWSGDVFQARDRAAEADNGVTVNYIIPKEGALMWFDQM 278
Query: 107 AIP 109
AIP
Sbjct: 279 AIP 281
>gi|444424427|ref|ZP_21219885.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444242422|gb|ELU53936.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 343
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 42/206 (20%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W+DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWEDLWKPELEGQVMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A N+ +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGMNLKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVP 172
+ H+ I+F L R ++ E++ S DT + V
Sbjct: 265 K------------NVEAAHKMIDFLL----------RPEIAEQI-----SADTGYLTAV- 296
Query: 173 PAEILARCEFLEPL--SEATLSDYEW 196
AE A+ + + PL S+ L EW
Sbjct: 297 -AESNAKFKDVAPLFPSQEDLDRVEW 321
>gi|365966841|ref|YP_004948403.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans ANH9381]
gi|416107105|ref|ZP_11590250.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|444347105|ref|ZP_21155054.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
gi|348005812|gb|EGY46284.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|365745754|gb|AEW76659.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans ANH9381]
gi|443540939|gb|ELT51449.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
Length = 365
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW PE G++ + + REV T A + L L V +F+
Sbjct: 169 WSDLWNPEYKGKVLLTSDAREVFHVALLLDGKSPNTTNEDEIKAAYERLEKLLPNVAVFN 228
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ G+V + + W+ A + N+ V PK GA W D +AIP +++
Sbjct: 229 SDSPEVPYVQGEVALGMIWNGSAYMAHRENENIQFVYPKEGAIFWMDNYAIPKSAK 284
>gi|417824477|ref|ZP_12471067.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE48]
gi|419829973|ref|ZP_14353459.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-1A2]
gi|419833550|ref|ZP_14357010.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A2]
gi|422307268|ref|ZP_16394430.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1035(8)]
gi|422917381|ref|ZP_16951703.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02A1]
gi|423821369|ref|ZP_17716306.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55C2]
gi|423854501|ref|ZP_17720100.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59A1]
gi|423881896|ref|ZP_17723700.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-60A1]
gi|423997792|ref|ZP_17741047.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02C1]
gi|424016685|ref|ZP_17756518.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55B2]
gi|424019613|ref|ZP_17759402.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59B1]
gi|424624984|ref|ZP_18063452.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A1]
gi|424629478|ref|ZP_18067770.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-51A1]
gi|424633517|ref|ZP_18071623.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-52A1]
gi|424636600|ref|ZP_18074611.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55A1]
gi|424639271|ref|ZP_18077170.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A1]
gi|424648582|ref|ZP_18086248.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A1]
gi|443527481|ref|ZP_21093537.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-78A1]
gi|340047481|gb|EGR08405.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE48]
gi|341637736|gb|EGS62407.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02A1]
gi|408013578|gb|EKG51289.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A1]
gi|408019055|gb|EKG56473.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-52A1]
gi|408024942|gb|EKG62019.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55A1]
gi|408027530|gb|EKG64501.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A1]
gi|408033819|gb|EKG70339.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A1]
gi|408056370|gb|EKG91258.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-51A1]
gi|408621558|gb|EKK94561.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-1A2]
gi|408622365|gb|EKK95352.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1035(8)]
gi|408635321|gb|EKL07534.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55C2]
gi|408641793|gb|EKL13560.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-60A1]
gi|408642031|gb|EKL13789.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59A1]
gi|408650153|gb|EKL21446.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A2]
gi|408853099|gb|EKL92908.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02C1]
gi|408860446|gb|EKM00080.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55B2]
gi|408867915|gb|EKM07266.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59B1]
gi|443454135|gb|ELT17946.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-78A1]
Length = 343
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 265 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQNVAPL--- 309
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 310 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 337
>gi|422356129|ref|ZP_16436821.1| bacterial extracellular solute-binding protein [Escherichia coli MS
117-3]
gi|422763989|ref|ZP_16817742.1| extracellular solute-binding protein [Escherichia coli E1167]
gi|422775327|ref|ZP_16828983.1| bacterial extracellular solute-binding protein [Escherichia coli
H120]
gi|323947122|gb|EGB43133.1| bacterial extracellular solute-binding protein [Escherichia coli
H120]
gi|324015948|gb|EGB85167.1| bacterial extracellular solute-binding protein [Escherichia coli MS
117-3]
gi|324116167|gb|EGC10090.1| extracellular solute-binding protein [Escherichia coli E1167]
Length = 395
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ ++PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFLIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|398908920|ref|ZP_10654281.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398188983|gb|EJM76268.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 365
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ GD+ IA+G+S D+ A R + N+A +PK G +LW D+
Sbjct: 216 VTYFHSSKYIADLANGDICIAIGFSGDMFQARNRAAEAKKGVNIAYSIPKEGGALWFDML 275
Query: 107 AIPAAS 112
AIP S
Sbjct: 276 AIPKDS 281
>gi|416086950|ref|ZP_11587581.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
gi|348009770|gb|EGY49881.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
Length = 345
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLALLGNQVRLF 56
W DLW PE G++ + + REV T + A ++ LL N V +F
Sbjct: 149 WSDLWNPEYKGKVLLTSDAREVFHVALLLDGKSPNTTNEDEIKAAYERLEKLLPN-VAVF 207
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + G+V + + W+ A + N+ V PK GA W D +AIP +++
Sbjct: 208 NSDSPEVPYVQGEVALGMIWNGSAYMAHRENENIQFVYPKEGAIFWMDNYAIPKSAK 264
>gi|417359080|ref|YP_002933226.2| spermidine/putrescine-binding periplasmic protein, putative
[Edwardsiella ictaluri 93-146]
gi|409033247|gb|ACR68991.2| spermidine/putrescine-binding periplasmic protein, putative
[Edwardsiella ictaluri 93-146]
Length = 352
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 24/195 (12%)
Query: 9 WKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQVRLFD 57
W DLW PE G + + + REV G +I A Q L L V F+
Sbjct: 155 WADLWKPEYKGSLLLTDDAREVFQIALRKLGYSGNTTDPKQIQAAYQELVKLMPNVLAFN 214
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ F G+V + + W+ A + + V +V PK GA W D AIPA ++
Sbjct: 215 SDNPANPFMEGEVNLGMIWNGSAYVARQADTPVQIVWPKEGAIFWMDSLAIPANAK---- 270
Query: 118 QIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPPAE 175
G LI+ + + Q A + + T ++LL + D L P AE
Sbjct: 271 ----NPEGAMKLINFLLRPDVAAQVAETIGYPTPNLAAQKLLPKEVVSDKSL---YPDAE 323
Query: 176 ILARCEFLEPLSEAT 190
+A+ E+ + A+
Sbjct: 324 TIAKGEWQNDVGSAS 338
>gi|312963723|ref|ZP_07778194.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens WH6]
gi|311281758|gb|EFQ60368.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens WH6]
Length = 364
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 18/93 (19%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ G++ +A G+S DV A R S N+A V+PK G +LW D+
Sbjct: 215 VTYFHSSKYISDLANGNICVAAGFSGDVFQAKARASEAGKGVNIAYVIPKEGGNLWFDVL 274
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ 139
AIP + KQ H +I + LQ
Sbjct: 275 AIPKDAT-NVKQ-----------AHAFINYLLQ 295
>gi|426412094|ref|YP_007032193.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
gi|426270311|gb|AFY22388.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
Length = 365
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A+G+S D+ A K+ N+A +PK G +LW D+
Sbjct: 216 VTYFHSSKYIADLANGDICVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKEGGALWFDML 275
Query: 107 AIPAAS 112
AIP S
Sbjct: 276 AIPKDS 281
>gi|444376510|ref|ZP_21175753.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterovibrio sp. AK16]
gi|443679376|gb|ELT86033.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterovibrio sp. AK16]
Length = 343
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 79/206 (38%), Gaps = 36/206 (17%)
Query: 2 NENGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLG 50
N F W DLW PEL G+I +++ REV G +I + L L
Sbjct: 143 NPEDFDSWADLWNPELEGQIMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYEELKKLM 202
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
V +F+ + + G+V + + W+ A + + +V PK G W D AIP
Sbjct: 203 PNVLVFNSDNPANPYLSGEVGLGMLWNGSAAAAQREGLPIELVWPKEGGIFWVDSLAIPK 262
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFN------TRVKLPEELLKGKPSLD 164
++ H+ I+F L+ A + T V+ K P+L
Sbjct: 263 NAKNTEAA------------HKMIDFLLRPEIAAKISADTGYLTAVEKSNAAYKDNPTL- 309
Query: 165 TKLIAGVPPAEILARCEFLEPLSEAT 190
PP E + R E+ + + + T
Sbjct: 310 ------FPPQEDIDRGEWQDAVGDLT 329
>gi|444344150|ref|ZP_21152448.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
gi|443544699|gb|ELT54641.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
Length = 311
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG----------TQAAAGRI-AVQQNLALLGNQVRLFD 57
W DLW PE G++ + + REV A I A + L L V +F+
Sbjct: 115 WSDLWNPEYKGKVLLTSDAREVFHVALLLDGKSPNTANEDEIKAAYERLEKLLPNVAVFN 174
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ G+V + + W+ A + N+ V PK GA W D +AIP +++
Sbjct: 175 SDSPEVPYVQGEVALGMIWNGSAYMAHRENENIQFVYPKEGAIFWMDNYAIPKSAK 230
>gi|429114895|ref|ZP_19175813.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 701]
gi|426318024|emb|CCK01926.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 701]
Length = 370
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T +A A L L +R F + Y+ G
Sbjct: 177 VSFLDAPEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANG 236
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|153817735|ref|ZP_01970402.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, partial [Vibrio
cholerae NCTC 8457]
gi|126511673|gb|EAZ74267.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
NCTC 8457]
Length = 269
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 71 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 130
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 131 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 190
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 191 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQDVAPL--- 235
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 236 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 263
>gi|229521524|ref|ZP_04410943.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TM 11079-80]
gi|229341622|gb|EEO06625.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TM 11079-80]
Length = 348
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 150 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 209
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 210 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 269
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 270 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQNVAPL--- 314
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 315 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 342
>gi|227485336|ref|ZP_03915652.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Anaerococcus lactolyticus
ATCC 51172]
gi|227236627|gb|EEI86642.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Anaerococcus lactolyticus
ATCC 51172]
Length = 359
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 81/215 (37%), Gaps = 40/215 (18%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-------------------LALL 49
W LW P+ G I + RE +G + + A+L
Sbjct: 158 WAKLWDPKFKGEILSFDGARETLGIGLLKNGYDINEKDEKILRKVKNDLVPFMANVKAIL 217
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
+++R++ G+ I + +S + A +A ++PK G+++W D IP
Sbjct: 218 ADEIRMY--------VAQGEADIGITFSGEAAKAEALNDKLAYIIPKEGSNIWFDTMVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKPSLDTKL 167
S+ G + LI + E + A + + T K +L+K P +D L
Sbjct: 270 KTSK--------NKEGAYALISYLLRPEVAAKNADYIHYATPNKKAMKLVKPNPRIDKTL 321
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
P +I+ + + L + T Y L +L+
Sbjct: 322 ---YPDDDIIDKLTVFKDLGKETTILYNDLYLDLK 353
>gi|386388626|ref|ZP_10073483.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
paraphrohaemolyticus HK411]
gi|385697477|gb|EIG27900.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
paraphrohaemolyticus HK411]
Length = 346
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 27/183 (14%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-------GTQAAAGR----IAVQQNLALLGNQVRLFD 57
W DLW E G++ ++N PREV G G A + L + V +F+
Sbjct: 148 WGDLWRDEYKGKLLLMNDPREVFHIALLLDGKSPNTGNEEEIKAAYERLKTIVPNVLVFN 207
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+V + + WS A ++ + PK GA LW D + IP + K
Sbjct: 208 SDSPEMPYLQGEVAVGMQWSGSAHRAKSENPDLQFIFPKEGAVLWMDNYVIPKGAA--NK 265
Query: 118 QIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLKG--KPSLDTKLIAGVPP 173
+ H++I+F L ++A+ + +P E +K P L + + P
Sbjct: 266 EAA----------HKFIDFLLRPESAKEVIETMGFSMPNEGVKALLSPELASDPLIFPPS 315
Query: 174 AEI 176
EI
Sbjct: 316 EEI 318
>gi|416077489|ref|ZP_11585927.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|348003976|gb|EGY44517.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
Length = 348
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG----------TQAAAGRI-AVQQNLALLGNQVRLFD 57
W DLW PE G++ + + REV A I A + L L V +F+
Sbjct: 152 WSDLWNPEYKGKVLLTSDAREVFHVALLLDGKSPNTANEDEIKAAYERLEKLLPNVAVFN 211
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ G+V + + W+ A + N+ V PK GA W D +AIP +++
Sbjct: 212 SDSPEVPYVQGEVALGMIWNGSAYMAHRENENIQFVYPKEGAIFWMDNYAIPKSAK 267
>gi|398928686|ref|ZP_10663639.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398168075|gb|EJM56101.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 365
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ GD+ IA+G+S D+ A R + N+A +PK G +LW D+
Sbjct: 216 VTYFHSSKYIADLANGDICIAIGFSGDMFQARNRAAEAKKGVNIAYSIPKEGGALWFDML 275
Query: 107 AIPAAS 112
AIP S
Sbjct: 276 AIPKDS 281
>gi|419957687|ref|ZP_14473753.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. cloacae
GS1]
gi|388607845|gb|EIM37049.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. cloacae
GS1]
Length = 372
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 222 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 281
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 282 FAMPADAK 289
>gi|209885624|ref|YP_002289481.1| putrescine-binding periplasmic protein [Oligotropha carboxidovorans
OM5]
gi|337740782|ref|YP_004632510.1| putrescine-binding periplasmic protein PotF [Oligotropha
carboxidovorans OM5]
gi|386029799|ref|YP_005950574.1| putrescine-binding periplasmic protein PotF [Oligotropha
carboxidovorans OM4]
gi|209873820|gb|ACI93616.1| putrescine-binding periplasmic protein [Oligotropha carboxidovorans
OM5]
gi|336094867|gb|AEI02693.1| putrescine-binding periplasmic protein PotF [Oligotropha
carboxidovorans OM4]
gi|336098446|gb|AEI06269.1| putrescine-binding periplasmic protein PotF [Oligotropha
carboxidovorans OM5]
Length = 368
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+R F + YL G++ +AVGWS D+ A KR + +A +PK GA ++ D
Sbjct: 219 IRKFHSSEYLSALATGEICLAVGWSGDIKQAQKRAAESKNGVEIAYAIPKEGAQMFFDNL 278
Query: 107 AIPAASR 113
AIP+ ++
Sbjct: 279 AIPSDAK 285
>gi|429734214|ref|ZP_19268250.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Aggregatibacter actinomycetemcomitans Y4]
gi|429152978|gb|EKX95777.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Aggregatibacter actinomycetemcomitans Y4]
Length = 365
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW PE G++ + + REV T A + L L V +F+
Sbjct: 169 WSDLWNPEYKGKVLLTSDAREVFHVALLLDGKSPNTTNEDEIKAAYERLEKLLPNVAVFN 228
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ G+V + + W+ A + N+ V PK GA W D +AIP +++
Sbjct: 229 SDSPEVPYVQGEVALGMIWNGSAYMAHRENKNIQFVYPKEGAIFWMDNYAIPKSAK 284
>gi|333898571|ref|YP_004472444.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333113836|gb|AEF20350.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 364
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 21 ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
+S ++S EVI +Q+A + L + + F + Y+ G+
Sbjct: 172 VSFMDSADEVIPSVLNYLGLDPNSQSADDYAKAEAKLMEVRPYISYFHSSKYISDLANGN 231
Query: 70 VWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 109
+ +A G+S DVL A R + +A +PK GA+LW D+ AIP
Sbjct: 232 ICVAFGYSGDVLQAADRAAEAGKGVEIAYAIPKEGANLWFDMLAIP 277
>gi|384424533|ref|YP_005633891.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae LMA3984-4]
gi|327484086|gb|AEA78493.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae LMA3984-4]
Length = 343
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 265 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQDVAPL--- 309
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 310 ----FPSQEDLDRVEWQSAVDDKTVKYEEYFM 337
>gi|224025704|ref|ZP_03644070.1| hypothetical protein BACCOPRO_02445 [Bacteroides coprophilus DSM
18228]
gi|224018940|gb|EEF76938.1| hypothetical protein BACCOPRO_02445 [Bacteroides coprophilus DSM
18228]
Length = 445
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 27/140 (19%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIGT--------QAAAGRI------------ 40
++E+ K W LW AG+I M ++ R+ G A GR+
Sbjct: 157 VSESDLKSWGCLWDKRFAGKILMKDAYRDAYGMALLYARRRDLAEGRVTVPELMNDYSPA 216
Query: 41 ---AVQQNLALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAV----V 93
+V++ L LL V ++ ++ G W+ + WS D A++ V V
Sbjct: 217 SMDSVEKYLKLLKPNVAGWEADFGKEMMTKGKAWMNMTWSGDAQWAIEEARTVGVELAYT 276
Query: 94 VPKSGASLWADLWAIPAASR 113
VP+ G+++W D W IP +R
Sbjct: 277 VPEEGSNIWYDGWVIPKYAR 296
>gi|153823726|ref|ZP_01976393.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
B33]
gi|183179407|ref|ZP_02957618.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
MZO-3]
gi|126518754|gb|EAZ75977.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
B33]
gi|183012818|gb|EDT88118.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
MZO-3]
Length = 312
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 114 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 173
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 174 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 233
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 234 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQDVAPL--- 278
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 279 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 306
>gi|440288330|ref|YP_007341095.1| spermidine/putrescine-binding periplasmic protein
[Enterobacteriaceae bacterium strain FGI 57]
gi|440047852|gb|AGB78910.1| spermidine/putrescine-binding periplasmic protein
[Enterobacteriaceae bacterium strain FGI 57]
Length = 370
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
VR F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NVRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|406707040|ref|YP_006757392.1| extracellular solute-binding protein [alpha proteobacterium HIMB59]
gi|406652816|gb|AFS48215.1| extracellular solute-binding protein [alpha proteobacterium HIMB59]
Length = 354
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 21 ISMVNSPREVI-------GTQAAAGRIAVQQNLALLGNQVR----LFDRTHYLKVFGIGD 69
++M+++P EV+ G + L Q+R FD + Y+ G+
Sbjct: 164 VAMLDAPSEVVEIALNYLGYDPNTENTKANEEALELLKQIRPYIKYFDSSQYIDDLANGE 223
Query: 70 VWIAVGWSSDV-LPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ +AVGWS DV + A + + V +P G +W D+ IPA ++
Sbjct: 224 ICLAVGWSGDVFIAAYEEIEEVWYSIPNEGTVIWFDMMGIPADAK 268
>gi|325848745|ref|ZP_08170255.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|325480389|gb|EGC83451.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 345
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 35/145 (24%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQA-AAGR-----------------IAVQQNL- 46
F WK+LW P+ G I + RE +G A GR + +N+
Sbjct: 141 FSSWKNLWDPKFEGEILSFDGARETLGIGLLANGRSLNETDEKVLRQTKDELVGFMKNVK 200
Query: 47 ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 106
A+L +++R++ G+ + + +S + A N++ +PK G+++W D
Sbjct: 201 AILADEIRMY--------MAQGEADVGITFSGEASMAESINKNLSYTIPKEGSNIWFDTM 252
Query: 107 AIPAASRLETKQIGGRVRGPFPLIH 131
IP S+ +G + LI+
Sbjct: 253 VIPKTSK--------NTKGAYALIN 269
>gi|432830829|ref|ZP_20064412.1| putrescine-binding periplasmic protein [Escherichia coli KTE135]
gi|431379670|gb|ELG64599.1| putrescine-binding periplasmic protein [Escherichia coli KTE135]
Length = 370
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ ++PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFLIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|77461625|ref|YP_351132.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77385628|gb|ABA77141.1| putrescine ABC transport system, substrate-binding periplasmic
protein precursor [Pseudomonas fluorescens Pf0-1]
Length = 375
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A+G+S D+ A K+ N+A +PK G +LW D+
Sbjct: 226 VTYFHSSKYIGDLANGDICVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKEGGALWFDML 285
Query: 107 AIPAAS 112
AIP S
Sbjct: 286 AIPKDS 291
>gi|420163650|ref|ZP_14670393.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM095]
gi|420167416|ref|ZP_14674076.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM087]
gi|394234073|gb|EJD79660.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM095]
gi|394238616|gb|EJD84078.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM087]
Length = 357
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 82/220 (37%), Gaps = 44/220 (20%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F W DL+ + I +V+ RE+IG + +++L L QVR
Sbjct: 155 FDSWDDLYHSQFKNDILLVDGAREIIGMGLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVR 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + +AV WS P V+ + V+PK G++LW D IP ++
Sbjct: 215 GIVGDEITMMLQQNEGHVAVVWSGVAAPLVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ- 273
Query: 115 ETKQIGGRVRGPFPLIH------------QWIEFCLQTARALPFNTRVKLPEELLKGKPS 162
G + ++ +W+ + A R KLP+++
Sbjct: 274 -------NKEGAYKFMNFLLDPQNSAQNTEWVGYATPNKAA-----RSKLPKKVRN---- 317
Query: 163 LDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWLVANLQ 202
D + P + R E + L +A+LSDY N +
Sbjct: 318 -DYRF---YPSKQEQQRLEVYKDLGQASLSDYNESFLNFK 353
>gi|51891606|ref|YP_074297.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Symbiobacterium thermophilum IAM 14863]
gi|51855295|dbj|BAD39453.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Symbiobacterium thermophilum IAM 14863]
Length = 353
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW PE GR+ + + RE+IG T ++ L L V+ F+
Sbjct: 157 WADLWNPEFQGRLVVPDDAREMIGIALRTEGYGVNTTDPDALARAKEKLKALKPNVKAFN 216
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
+ G+VW V WS + ++ ++P G ++W D AIP
Sbjct: 217 SDSPKDLLLGGEVWGGVVWSGEAALVMRESDAFQFILPPEGVTMWVDNVAIP 268
>gi|398868529|ref|ZP_10623926.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398232983|gb|EJN18931.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 370
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 37/207 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI----------GTQAAAGRIAVQQNLAL-LGNQ 52
W L+ PE A + IS ++SP E+I ++A + L L +
Sbjct: 161 WDLLFKPENAAKLKSCGISFLDSPTEMIPVALHYLGYPTDSQDKKQLAEAEALFLKIRPS 220
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ G++ +AVG+S D+ A R + V+ +PK GA + D+
Sbjct: 221 VGYFHSSKYISDLANGNICVAVGYSGDIYQAKSRAAEAGDKVKVSYNIPKEGAGSFYDMV 280
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTK 166
AIP + V G + +++ F + V+ P P +D +
Sbjct: 281 AIPKDAE--------NVEGAY----KFMTFLQKPEIMAEITNAVRFPNGNAAATPLVDKE 328
Query: 167 LIAG---VPPAEILARCEFLEPLSEAT 190
+ A PPA++LA+ + L AT
Sbjct: 329 ITADPGIYPPADVLAKLYAIADLPAAT 355
>gi|209918103|ref|YP_002292187.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SE11]
gi|417144631|ref|ZP_11986437.1| putrescine-binding periplasmic protein [Escherichia coli 1.2264]
gi|417152559|ref|ZP_11991350.1| putrescine-binding periplasmic protein [Escherichia coli 96.0497]
gi|417580120|ref|ZP_12230937.1| putrescine-binding periplasmic protein [Escherichia coli STEC_B2F1]
gi|433091183|ref|ZP_20277478.1| putrescine-binding periplasmic protein [Escherichia coli KTE138]
gi|209911362|dbj|BAG76436.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE11]
gi|345342465|gb|EGW74859.1| putrescine-binding periplasmic protein [Escherichia coli STEC_B2F1]
gi|386164514|gb|EIH26300.1| putrescine-binding periplasmic protein [Escherichia coli 1.2264]
gi|386169283|gb|EIH35791.1| putrescine-binding periplasmic protein [Escherichia coli 96.0497]
gi|431613376|gb|ELI82573.1| putrescine-binding periplasmic protein [Escherichia coli KTE138]
Length = 370
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ ++PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFLIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|429103745|ref|ZP_19165719.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter turicensis 564]
gi|426290394|emb|CCJ91832.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter turicensis 564]
Length = 370
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T +A A L L +R F + Y+ G
Sbjct: 177 VSFLDAPEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANG 236
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|389841581|ref|YP_006343665.1| putrescine transporter subunit PotF [Cronobacter sakazakii ES15]
gi|424798972|ref|ZP_18224514.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 696]
gi|429090151|ref|ZP_19152883.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter universalis NCTC 9529]
gi|429109669|ref|ZP_19171439.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 507]
gi|429122224|ref|ZP_19182813.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 680]
gi|387852057|gb|AFK00155.1| putrescine transporter subunit PotF [Cronobacter sakazakii ES15]
gi|423234693|emb|CCK06384.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 696]
gi|426310826|emb|CCJ97552.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 507]
gi|426323276|emb|CCK13550.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 680]
gi|426509954|emb|CCK17995.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter universalis NCTC 9529]
Length = 370
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T +A A L L +R F + Y+ G
Sbjct: 177 VSFLDAPEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANG 236
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|359786979|ref|ZP_09290052.1| extracellular solute-binding protein [Halomonas sp. GFAJ-1]
gi|359295745|gb|EHK60007.1| extracellular solute-binding protein [Halomonas sp. GFAJ-1]
Length = 367
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 47 ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGAS 100
A+ GN + F + Y+ GD+ +A G+S D+ A R + +PK GA+
Sbjct: 213 AIRGN-ITYFHSSRYVSDLANGDICVAAGYSGDIFQAADRAEEAGRDFTIGYSIPKEGAA 271
Query: 101 LWADLWAIPA 110
LW D+ AIPA
Sbjct: 272 LWFDMMAIPA 281
>gi|404370601|ref|ZP_10975922.1| hypothetical protein CSBG_02094 [Clostridium sp. 7_2_43FAA]
gi|226913267|gb|EEH98468.1| hypothetical protein CSBG_02094 [Clostridium sp. 7_2_43FAA]
Length = 350
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 68 GDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGP 126
G+ IA+ WS + L N+ V+PK GA+ W D WAIPA A+ ET +
Sbjct: 222 GEASIAMIWSGEGLTLADENENLEYVIPKEGANYWLDSWAIPANANDKETAE-------K 274
Query: 127 FPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPPAEILARCEFLEPL 186
F + + A + + T KL ++ +P P EI+ +CE + L
Sbjct: 275 FINFVSGKDNAYKIAEEIGYTTPNKLA---MEEQPEEVKNNEGAYMPKEIMEKCEVYKYL 331
Query: 187 SEATLSDYE 195
+ L YE
Sbjct: 332 PQEKLRLYE 340
>gi|238757952|ref|ZP_04619134.1| Putrescine-binding periplasmic protein [Yersinia aldovae ATCC
35236]
gi|238703937|gb|EEP96472.1| Putrescine-binding periplasmic protein [Yersinia aldovae ATCC
35236]
Length = 369
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T QA + L L +R F + Y+ G
Sbjct: 176 VSFLDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANG 235
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +AVGW+ D++ A R NVA +PK G + D++A+P+ ++
Sbjct: 236 DICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGVLAFFDVFAMPSDAK 286
>gi|416893688|ref|ZP_11924780.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Aggregatibacter aphrophilus ATCC 33389]
gi|347813745|gb|EGY30399.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Aggregatibacter aphrophilus ATCC 33389]
Length = 363
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW PE G++ + + REV T + A + L L V +F+
Sbjct: 167 WADLWNPEYKGKVLLTSDAREVFHIALLLDGKSPNTTSEDDIKAAYERLVKLLPNVAVFN 226
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ G+V + + W+ A K +A V PK GA W D +AIP ++
Sbjct: 227 SDSPEVPYVQGEVALGMIWNGSGYLAHKENDKIAFVYPKEGAIFWMDNYAIPKGAK 282
>gi|255745805|ref|ZP_05419753.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholera CIRS 101]
gi|262158916|ref|ZP_06030028.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae INDRE 91/1]
gi|360035320|ref|YP_004937083.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O1 str. 2010EL-1786]
gi|379741220|ref|YP_005333189.1| spermidine/putrescine transport system substrate-binding protein
[Vibrio cholerae IEC224]
gi|417813439|ref|ZP_12460095.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-49A2]
gi|417816303|ref|ZP_12462935.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HCUF01]
gi|418332453|ref|ZP_12943385.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-06A1]
gi|418337194|ref|ZP_12946092.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-23A1]
gi|418344712|ref|ZP_12950494.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-28A1]
gi|418348862|ref|ZP_12953596.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43A1]
gi|418354835|ref|ZP_12957556.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A1]
gi|419825904|ref|ZP_14349408.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1033(6)]
gi|421316332|ref|ZP_15766903.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1032(5)]
gi|421321028|ref|ZP_15771585.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1038(11)]
gi|421325023|ref|ZP_15775549.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1041(14)]
gi|421328683|ref|ZP_15779197.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1042(15)]
gi|421331707|ref|ZP_15782187.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1046(19)]
gi|421335282|ref|ZP_15785748.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1048(21)]
gi|421339172|ref|ZP_15789607.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-20A2]
gi|421347193|ref|ZP_15797575.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46A1]
gi|421351188|ref|ZP_15801553.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-25]
gi|421354178|ref|ZP_15804510.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-45]
gi|422891535|ref|ZP_16933908.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-40A1]
gi|422902742|ref|ZP_16937736.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48A1]
gi|422906625|ref|ZP_16941449.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-70A1]
gi|422913204|ref|ZP_16947721.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HFU-02]
gi|422922727|ref|ZP_16955904.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae BJG-01]
gi|422925684|ref|ZP_16958707.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-38A1]
gi|423145007|ref|ZP_17132614.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-19A1]
gi|423149682|ref|ZP_17137010.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-21A1]
gi|423153495|ref|ZP_17140689.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-22A1]
gi|423156310|ref|ZP_17143414.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-32A1]
gi|423160134|ref|ZP_17147102.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-33A2]
gi|423164860|ref|ZP_17151611.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48B2]
gi|423730991|ref|ZP_17704303.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A1]
gi|423758144|ref|ZP_17712346.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A2]
gi|423892680|ref|ZP_17726360.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62A1]
gi|423927599|ref|ZP_17730978.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-77A1]
gi|424002327|ref|ZP_17745411.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A2]
gi|424006162|ref|ZP_17749140.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-37A1]
gi|424024180|ref|ZP_17763838.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62B1]
gi|424027029|ref|ZP_17766640.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-69A1]
gi|424586303|ref|ZP_18025890.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1030(3)]
gi|424590918|ref|ZP_18030351.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1037(10)]
gi|424595006|ref|ZP_18034338.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1040(13)]
gi|424598874|ref|ZP_18038063.1| bacterial extracellular solute-binding family protein [Vibrio
Cholerae CP1044(17)]
gi|424601604|ref|ZP_18040756.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1047(20)]
gi|424606602|ref|ZP_18045560.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1050(23)]
gi|424610432|ref|ZP_18049283.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-39A1]
gi|424613238|ref|ZP_18052039.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41A1]
gi|424617228|ref|ZP_18055912.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-42A1]
gi|424622002|ref|ZP_18060523.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-47A1]
gi|424644974|ref|ZP_18082722.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A2]
gi|424652696|ref|ZP_18090130.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A2]
gi|424656557|ref|ZP_18093855.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A2]
gi|429884851|ref|ZP_19366458.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae PS15]
gi|440709678|ref|ZP_20890335.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
4260B]
gi|443503514|ref|ZP_21070490.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-64A1]
gi|443507413|ref|ZP_21074195.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-65A1]
gi|443511543|ref|ZP_21078195.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-67A1]
gi|443515098|ref|ZP_21081622.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-68A1]
gi|443518891|ref|ZP_21085300.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-71A1]
gi|443523786|ref|ZP_21090009.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-72A2]
gi|443531391|ref|ZP_21097406.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-7A1]
gi|443535173|ref|ZP_21101062.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-80A1]
gi|443538734|ref|ZP_21104589.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A1]
gi|449056092|ref|ZP_21734760.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae O1 str. Inaba G4222]
gi|255736880|gb|EET92277.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholera CIRS 101]
gi|262029101|gb|EEY47753.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae INDRE 91/1]
gi|340041025|gb|EGR01994.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-49A2]
gi|340042029|gb|EGR02995.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HCUF01]
gi|341623127|gb|EGS48693.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-70A1]
gi|341623164|gb|EGS48729.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48A1]
gi|341624190|gb|EGS49698.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-40A1]
gi|341639276|gb|EGS63897.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HFU-02]
gi|341644985|gb|EGS69142.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae BJG-01]
gi|341647122|gb|EGS71212.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-38A1]
gi|356419012|gb|EHH72582.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-06A1]
gi|356419347|gb|EHH72895.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-21A1]
gi|356424409|gb|EHH77815.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-19A1]
gi|356430596|gb|EHH83802.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-22A1]
gi|356432772|gb|EHH85969.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-23A1]
gi|356435910|gb|EHH89046.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-28A1]
gi|356441710|gb|EHH94598.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-32A1]
gi|356447601|gb|EHI00392.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43A1]
gi|356448465|gb|EHI01235.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-33A2]
gi|356453237|gb|EHI05900.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A1]
gi|356454241|gb|EHI06893.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48B2]
gi|356646474|gb|AET26529.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O1 str. 2010EL-1786]
gi|378794730|gb|AFC58201.1| spermidine/putrescine transport system substrate-binding protein
[Vibrio cholerae IEC224]
gi|395920693|gb|EJH31515.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1041(14)]
gi|395921289|gb|EJH32109.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1032(5)]
gi|395924010|gb|EJH34821.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1038(11)]
gi|395930189|gb|EJH40938.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1042(15)]
gi|395932971|gb|EJH43714.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1046(19)]
gi|395936236|gb|EJH46964.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1048(21)]
gi|395944120|gb|EJH54794.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-20A2]
gi|395946253|gb|EJH56917.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46A1]
gi|395951633|gb|EJH62247.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-25]
gi|395953303|gb|EJH63916.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-45]
gi|395960142|gb|EJH70530.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A2]
gi|395961280|gb|EJH71617.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A2]
gi|395963980|gb|EJH74225.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-42A1]
gi|395971968|gb|EJH81594.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-47A1]
gi|395975269|gb|EJH84763.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1030(3)]
gi|395977249|gb|EJH86667.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1047(20)]
gi|408008100|gb|EKG46117.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-39A1]
gi|408014319|gb|EKG51971.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41A1]
gi|408033684|gb|EKG70213.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1037(10)]
gi|408033780|gb|EKG70304.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1040(13)]
gi|408043223|gb|EKG79230.1| bacterial extracellular solute-binding family protein [Vibrio
Cholerae CP1044(17)]
gi|408044546|gb|EKG80453.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1050(23)]
gi|408055160|gb|EKG90100.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A2]
gi|408609985|gb|EKK83361.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1033(6)]
gi|408625133|gb|EKK98053.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A1]
gi|408637752|gb|EKL09772.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A2]
gi|408655756|gb|EKL26864.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-77A1]
gi|408657242|gb|EKL28328.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62A1]
gi|408846729|gb|EKL86814.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-37A1]
gi|408847448|gb|EKL87517.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A2]
gi|408871222|gb|EKM10466.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62B1]
gi|408879715|gb|EKM18666.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-69A1]
gi|429228367|gb|EKY34289.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae PS15]
gi|439975267|gb|ELP51403.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
4260B]
gi|443432106|gb|ELS74640.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-64A1]
gi|443435945|gb|ELS82070.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-65A1]
gi|443439485|gb|ELS89186.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-67A1]
gi|443443586|gb|ELS96875.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-68A1]
gi|443447442|gb|ELT04085.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-71A1]
gi|443450188|gb|ELT10469.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-72A2]
gi|443458474|gb|ELT25870.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-7A1]
gi|443461636|gb|ELT32698.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-80A1]
gi|443466323|gb|ELT40982.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A1]
gi|448264428|gb|EMB01666.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae O1 str. Inaba G4222]
Length = 343
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 265 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQDVAPL--- 309
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 310 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 337
>gi|374325022|ref|YP_005078151.1| extracellular solute-binding protein [Paenibacillus terrae HPL-003]
gi|357204031|gb|AET61928.1| extracellular solute-binding protein family 1 [Paenibacillus terrae
HPL-003]
Length = 357
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 86/218 (39%), Gaps = 50/218 (22%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQAAA--------GRIAVQQNL----------- 46
F W LW P+L + +V+ REV+G + +QQ L
Sbjct: 155 FHSWDGLWNPKLRNNLLLVDGAREVVGMSLNSLHYSLNDTNEAHLQQALAKLEKLAPNVK 214
Query: 47 ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 106
A++G+++++ + + V WS D + + +VP G++LW D
Sbjct: 215 AVVGDEIKM--------LLANEEAAAGVVWSGDASEIMDENDKLDYIVPDEGSNLWFDNM 266
Query: 107 AIP-AASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKG 159
IP A+ ++ H++I F + Q A + ++T + ++LL
Sbjct: 267 VIPKTATHVDAA-------------HKFINFMMQPDVAAQNAEFVGYSTPNEDGKKLLPE 313
Query: 160 KPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
S D + PP+EI + E L + L+ Y L
Sbjct: 314 DISGDERF---YPPSEITDKLEVYNNLGKRMLAHYNEL 348
>gi|218658780|ref|ZP_03514710.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Rhizobium etli IE4771]
Length = 163
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 17/110 (15%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
I ++++P++V+ T A V++ L + +R F + Y+ GD
Sbjct: 43 IYVLDTPKDVMTTALRYLGLDPNSTKAEDFKKVEELLTAVRPYIRKFHSSEYINALANGD 102
Query: 70 VWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
+ IA G+S D+L A R + V +P GA +W D+ AIPA ++
Sbjct: 103 ICIAFGYSGDMLQARDRAAEAKNGVEVNYSIPAQGAQMWFDMMAIPADAK 152
>gi|432464817|ref|ZP_19706923.1| putrescine-binding periplasmic protein [Escherichia coli KTE205]
gi|432582913|ref|ZP_19819323.1| putrescine-binding periplasmic protein [Escherichia coli KTE57]
gi|433071904|ref|ZP_20258598.1| putrescine-binding periplasmic protein [Escherichia coli KTE129]
gi|433119402|ref|ZP_20305109.1| putrescine-binding periplasmic protein [Escherichia coli KTE157]
gi|433182391|ref|ZP_20366686.1| putrescine-binding periplasmic protein [Escherichia coli KTE85]
gi|430996623|gb|ELD12899.1| putrescine-binding periplasmic protein [Escherichia coli KTE205]
gi|431119929|gb|ELE22928.1| putrescine-binding periplasmic protein [Escherichia coli KTE57]
gi|431592074|gb|ELI62980.1| putrescine-binding periplasmic protein [Escherichia coli KTE129]
gi|431648264|gb|ELJ15663.1| putrescine-binding periplasmic protein [Escherichia coli KTE157]
gi|431711030|gb|ELJ75392.1| putrescine-binding periplasmic protein [Escherichia coli KTE85]
Length = 370
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA ++ D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMVFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|424925503|ref|ZP_18348864.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404306663|gb|EJZ60625.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 365
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A+G+S D+ A K+ N+A +PK G +LW D+
Sbjct: 216 VTYFHSSKYIGDLANGDICVAIGFSGDIFQAKHRAEEAKKGVNIAYSIPKEGGALWFDML 275
Query: 107 AIPAAS 112
AIP S
Sbjct: 276 AIPKDS 281
>gi|417789994|ref|ZP_12437590.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii E899]
gi|449308836|ref|YP_007441192.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii SP291]
gi|333955915|gb|EGL73622.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii E899]
gi|449098869|gb|AGE86903.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii SP291]
Length = 370
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT------------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIG 68
+S +++P E+ T +A A L L +R F + Y+ G
Sbjct: 177 VSFLDAPEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANG 236
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|116250535|ref|YP_766373.1| putrescine-binding periplasmic component of ABC transporter
[Rhizobium leguminosarum bv. viciae 3841]
gi|115255183|emb|CAK06257.1| putative putrescine-binding periplasmic component of ABC
transporter [Rhizobium leguminosarum bv. viciae 3841]
Length = 365
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
I ++++P++VI T A ++ L + +R F + Y+ GD
Sbjct: 173 IYVLDTPKDVISTAFRYLGLDPNSTKAEDFKKAEELLTAVRPNIRKFHSSEYINALANGD 232
Query: 70 VWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 110
+ IA G+S D+L A R + V +P GA +W D+ AIPA
Sbjct: 233 ICIAFGYSGDMLQARDRAAEAKNGVEVNYSIPSQGAQMWFDMMAIPA 279
>gi|398975950|ref|ZP_10685976.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
gi|398139942|gb|EJM28930.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
Length = 365
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A+G+S D+ A K+ N+A +PK G +LW D+
Sbjct: 216 VTYFHSSKYIGDLANGDICVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKEGGALWFDML 275
Query: 107 AIPAAS 112
AIP S
Sbjct: 276 AIPKDS 281
>gi|393784280|ref|ZP_10372446.1| hypothetical protein HMPREF1071_03314 [Bacteroides salyersiae
CL02T12C01]
gi|392666320|gb|EIY59835.1| hypothetical protein HMPREF1071_03314 [Bacteroides salyersiae
CL02T12C01]
Length = 443
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 29/141 (20%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIGT--------QAAAGRIAVQQNLALLGNQ 52
+ E W LW + AG+I M ++ R+ GT + A G++ V+Q + Q
Sbjct: 156 VTEQDVDTWGCLWDKKFAGKILMKDAYRDAYGTAIIYSHAKELAEGKVTVEQLMNDYSPQ 215
Query: 53 VRLFDRTHYLKV-----------FGI-----GDVWIAVGWSSDVLPAVKRMSNVAV---- 92
YLK FG WI + WS D + A++ V V
Sbjct: 216 AMAI-VEKYLKAMKPNIAGWEADFGKEMMTKNKAWINMTWSGDAMWAIEEADAVGVDLDY 274
Query: 93 VVPKSGASLWADLWAIPAASR 113
VVP+ G+++W D W IP +R
Sbjct: 275 VVPEEGSNIWYDGWVIPKYAR 295
>gi|347751388|ref|YP_004858953.1| extracellular solute-binding protein family 1 [Bacillus coagulans
36D1]
gi|347583906|gb|AEP00173.1| extracellular solute-binding protein family 1 [Bacillus coagulans
36D1]
Length = 357
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 48/214 (22%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGT------------------QAAAGRIAVQQNL-ALL 49
W DLW P+L +I +V+ REV+G QA A + N+ A++
Sbjct: 158 WDDLWDPDLKNQILLVDGAREVMGMGLNSLHYSLNDTNEKHLQQAKAKLDRLMPNVKAIV 217
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G+++++ + + + V WS D + + VVP G++LW D IP
Sbjct: 218 GDEIKM--------LLANEEASLGVVWSGDAAEIMSENKKLNYVVPSEGSNLWFDNMVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSL 163
+ K + G ++ +I F L Q A + ++T K ++L S
Sbjct: 270 KTA----KNVDGALK--------FINFMLDPKNAAQNAEYVGYSTPNKAALKILPKSISG 317
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
D + P A + + E + L + L+ Y L
Sbjct: 318 DRRF---YPDAALTKKLEVYKNLGKKKLARYNEL 348
>gi|295425899|ref|ZP_06818577.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus amylolyticus
DSM 11664]
gi|295064397|gb|EFG55327.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus amylolyticus
DSM 11664]
Length = 357
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAV-----------QQNLALLGNQVRLFD 57
W DLW + +I +++S R+ +G A+ ++ Q L LGN ++
Sbjct: 158 WNDLWRKKYRRQILLIDSARDAMGLSLASMGYSMNSTNNLKLKLAQTKLNGLGNNIKAII 217
Query: 58 RTHYLKVFGI-GDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLET 116
+K++ I + I V WS + ++ S++ V+PK ++LW D IP ++
Sbjct: 218 ADE-MKMYMIQNEAAIGVTWSGEAHEMMESNSHLHYVIPKPASNLWFDNLVIPKTAK--- 273
Query: 117 KQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPPA 174
+ + I+ + E Q A+ + + T ++LL K D + P A
Sbjct: 274 -----NKKAAYEFINFMLEPENAAQNAKYIGYATPNTAAQKLLPKKTRNDRQF---YPSA 325
Query: 175 EILARCEFLEPLSEATLSDYE 195
+ L+ + + L +Y
Sbjct: 326 KTLSHLQVYQDLGNKVTQEYN 346
>gi|163800914|ref|ZP_02194814.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio sp. AND4]
gi|159175263|gb|EDP60060.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio sp. AND4]
Length = 348
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 42/206 (20%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 150 NDFQSWADLWKPELEGQVMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPN 209
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A N+ +V PK G W D +AI + +
Sbjct: 210 VLVFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGMNLKLVFPKEGGIGWVDNFAISSGA 269
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVP 172
+ H+ I+F L R K+ E++ S DT + V
Sbjct: 270 K------------NVDAAHKMIDFLL----------RPKIAEQI-----SADTGYLTAV- 301
Query: 173 PAEILARCEFLEPL--SEATLSDYEW 196
AE A+ + + PL ++ L EW
Sbjct: 302 -AESNAKFKDVAPLFPTQEDLDRIEW 326
>gi|262165669|ref|ZP_06033406.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio mimicus VM223]
gi|262171533|ref|ZP_06039211.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio mimicus MB-451]
gi|261892609|gb|EEY38595.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio mimicus MB-451]
gi|262025385|gb|EEY44053.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio mimicus VM223]
Length = 343
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T V+ + K L
Sbjct: 265 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVQASNDKFKDVAPL--- 309
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 310 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 337
>gi|424873780|ref|ZP_18297442.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393169481|gb|EJC69528.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 365
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
I ++++P++VI T A ++ L + +R F + Y+ GD
Sbjct: 173 IYVLDTPKDVISTAFRYLGLDPNSTKAEDFKKAEELLTAVRPNIRKFHSSEYINALANGD 232
Query: 70 VWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 110
+ IA G+S D+L A R + V +P GA +W D+ AIPA
Sbjct: 233 ICIAFGYSGDMLQARDRAAEAKNGVEVNYSIPSQGAQMWFDMMAIPA 279
>gi|417820831|ref|ZP_12467445.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE39]
gi|423953534|ref|ZP_17734542.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-40]
gi|423982981|ref|ZP_17738093.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-46]
gi|340038462|gb|EGQ99436.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE39]
gi|408659431|gb|EKL30481.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-40]
gi|408664912|gb|EKL35733.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-46]
Length = 343
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDQQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 265 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQDVAPL--- 309
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 310 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 337
>gi|288940868|ref|YP_003443108.1| family 1 extracellular solute-binding protein [Allochromatium
vinosum DSM 180]
gi|288896240|gb|ADC62076.1| extracellular solute-binding protein family 1 [Allochromatium
vinosum DSM 180]
Length = 368
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 22/123 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQ 52
W ++ PE A + IS+++ P EV +QA A + + +
Sbjct: 159 WALIFDPEKASKLAGCGISLLDDPTEVFAAALVYLGKDPNSQAPEDLEAAAELIKAVRPH 218
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+R F + Y+ G +A G+S DVL A +R VA +P+ GA LW D+
Sbjct: 219 IRYFHSSQYISDLANGATCVAHGYSGDVLQARERAEEAGKGVTVAYRIPREGAVLWTDVM 278
Query: 107 AIP 109
AIP
Sbjct: 279 AIP 281
>gi|419836271|ref|ZP_14359713.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46B1]
gi|421342686|ref|ZP_15793091.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43B1]
gi|422910530|ref|ZP_16945165.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-09]
gi|423735179|ref|ZP_17708382.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41B1]
gi|424009108|ref|ZP_17752050.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-44C1]
gi|424658783|ref|ZP_18096034.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-16]
gi|341633318|gb|EGS58139.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-09]
gi|395943203|gb|EJH53878.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43B1]
gi|408053975|gb|EKG88969.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-16]
gi|408630215|gb|EKL02843.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41B1]
gi|408857749|gb|EKL97431.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46B1]
gi|408864619|gb|EKM04049.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-44C1]
Length = 343
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 265 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQDVAPL--- 309
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 310 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 337
>gi|322515385|ref|ZP_08068379.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Actinobacillus ureae ATCC
25976]
gi|322118612|gb|EFX90840.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Actinobacillus ureae ATCC
25976]
Length = 349
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 58/146 (39%), Gaps = 23/146 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW E G++ M+N PREV ++ + Q L L V +F+
Sbjct: 152 WGDLWRDEYKGKLLMMNDPREVFHIALLLDGKSPNSENEQEIQSAYQRLQKLVPNVLVFN 211
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+V + + WS A ++ V PK GA +W D + IP + K
Sbjct: 212 SDSPEMPYLQGEVSVGMQWSGSAHRAKSENPDLKFVFPKEGAVIWMDNYVIPKGAV--NK 269
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARA 143
+ H++I+F L A
Sbjct: 270 EAA----------HKFIDFLLHPESA 285
>gi|224368487|ref|YP_002602650.1| protein PotD1 [Desulfobacterium autotrophicum HRM2]
gi|223691203|gb|ACN14486.1| PotD1 [Desulfobacterium autotrophicum HRM2]
Length = 343
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 13/125 (10%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQQNLAL 48
+N WKDLW PE R+ M + REV G T A + A + L
Sbjct: 138 VNPGNMTSWKDLWRPEFKNRLVMNDDLREVFGVGLIVNGFSVNDTDPAHIKTAFESIKTL 197
Query: 49 LGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 108
+ N +R+F + + + + W+ + A + + V PK GA W D I
Sbjct: 198 MPN-IRVFSGDSPKQPLLNLETYAGMIWNGEAYMASQEFPAIQYVYPKEGAIFWVDSMCI 256
Query: 109 PAASR 113
P S+
Sbjct: 257 PKGSK 261
>gi|422337723|ref|ZP_16418693.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter aphrophilus F0387]
gi|353345055|gb|EHB89353.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter aphrophilus F0387]
Length = 388
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW PE G++ + + REV T + A + L L V +F+
Sbjct: 192 WADLWNPEYKGKVLLTSDAREVFHIALLLDGKSPNTTSEDDIKAAYERLVKLLPNVAVFN 251
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ G+V + + W+ A K +A V PK GA W D +AIP ++
Sbjct: 252 SDSPEVPYVQGEVALGMIWNGSGYLAHKENDKIAFVYPKEGAIFWMDNYAIPKGAK 307
>gi|407693810|ref|YP_006818599.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus suis H91-0380]
gi|407389867|gb|AFU20360.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus suis H91-0380]
Length = 349
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 25/163 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW E G++ M+N PREV ++ + Q L L V +F+
Sbjct: 152 WGDLWRDEYKGKLLMMNDPREVFHIALLLDGKSPNSENEQEIQSAYQRLQKLVPNVLVFN 211
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+V + + WS A ++ V PK GA +W D + IP + K
Sbjct: 212 SDSPEMPYLQGEVSVGMQWSGSAHRAKSENPDLKFVFPKEGAVIWMDNYVIPKGAV--NK 269
Query: 118 QIGGRVRGPFPLIHQWIEFCL--QTARALPFNTRVKLPEELLK 158
+ H++I+F L ++A+ + +P E +K
Sbjct: 270 EAA----------HKFIDFLLRPESAKEVIETMGFSMPNEGVK 302
>gi|418602598|ref|ZP_13165997.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21345]
gi|374394945|gb|EHQ66220.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21345]
Length = 357
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F WK L+ P+ +I +V+ RE+IG + + +++L L QVR
Sbjct: 155 FDSWKSLYNPKFKNQILLVDGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVR 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + IAV WS P V+ V+PK G++LW D IP ++
Sbjct: 215 GVVGDEITMILEQNEGNIAVVWSGVAAPLVQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|330501319|ref|YP_004378188.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
gi|328915605|gb|AEB56436.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
Length = 363
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
V F + Y+ G++ +A G+S D+L A R +A +PK GA+LW D+
Sbjct: 214 VTYFHSSKYIGDLANGNICVAAGFSGDILQAADRAEEAGKGIEIAYSIPKEGANLWFDMM 273
Query: 107 AIPAAS 112
AIPA S
Sbjct: 274 AIPADS 279
>gi|387774188|ref|ZP_10129460.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
parahaemolyticus HK385]
gi|386902332|gb|EIJ67173.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
parahaemolyticus HK385]
Length = 346
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 23/146 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW E G++ ++N PREV T+ A + L + V +F+
Sbjct: 148 WGDLWRDEYKGKLLLMNDPREVFHIALLLNGKSPNTENEEEIKAAYERLKTIVPNVLVFN 207
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ G+V + + WS A ++ + PK GA LW D + IP + K
Sbjct: 208 SDSPEMPYLQGEVAVGMQWSGSAHRAKSENPDLQFIFPKEGAVLWMDNYVIPKGAA--NK 265
Query: 118 QIGGRVRGPFPLIHQWIEFCLQTARA 143
+ H++I+F L+ A
Sbjct: 266 EAA----------HKFIDFLLRPESA 281
>gi|257874990|ref|ZP_05654643.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
gi|257809156|gb|EEV37976.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
Length = 359
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 41/205 (20%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG--------TQAAAGRIAVQQNLALLGN-----QVRL 55
W DLW+P + MV+ RE +G +Q V + L L + + L
Sbjct: 161 WSDLWVPAFKNDVLMVDGARETLGIALQTLGLSQNEKDPTKVTKALKKLESIRPNVKAVL 220
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
D L + D + +G+S D + V +VP G ++W D +AIP
Sbjct: 221 TDEIKTLMINN--DAPLGIGYSGDAAYVMAENPAVTYIVPNDGGAIWTDNFAIP------ 272
Query: 116 TKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPP 173
+ G + G + I+ + E Q A + + T + + +L P
Sbjct: 273 --KTVGNLEGAYAFINFMLRPENAAQNAEYVGYATPSETAKAML---------------P 315
Query: 174 AEILARCEFL-EPLSEATLSDYEWL 197
AE+ A F EP + + YE+L
Sbjct: 316 AELTADKTFYPEPSAMEQMEHYEYL 340
>gi|251793731|ref|YP_003008461.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter aphrophilus NJ8700]
gi|247535128|gb|ACS98374.1| spermidine/putrescine-binding periplasmic protein 2
[Aggregatibacter aphrophilus NJ8700]
Length = 388
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW PE G++ + + REV T + A + L L V +F+
Sbjct: 192 WADLWNPEYKGKVLLTSDAREVFHIALLLDGKSPNTTSEDDIKAAYERLVKLLPNVAVFN 251
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ G+V + + W+ A K +A V PK GA W D +AIP ++
Sbjct: 252 SDSPEVPYVQGEVALGMIWNGSGYLAHKENDKIAFVYPKEGAIFWMDNYAIPKGAK 307
>gi|156974568|ref|YP_001445475.1| hypothetical protein VIBHAR_02286 [Vibrio harveyi ATCC BAA-1116]
gi|156526162|gb|ABU71248.1| hypothetical protein VIBHAR_02286 [Vibrio harveyi ATCC BAA-1116]
Length = 343
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 42/206 (20%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWADLWKPELEGQVMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A N+ +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGMNLKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVP 172
+ H+ I+F L R ++ E++ S DT + V
Sbjct: 265 K------------NVEAAHKMIDFLL----------RPEIAEQI-----SADTGYLTAV- 296
Query: 173 PAEILARCEFLEPL--SEATLSDYEW 196
AE A+ + + PL S+ L EW
Sbjct: 297 -AESNAKFQDVAPLFPSQEDLDRVEW 321
>gi|331268532|ref|YP_004395024.1| extracellular solute-binding protein [Clostridium botulinum
BKT015925]
gi|329125082|gb|AEB75027.1| Bacterial extracellular solute-binding protein, putative
[Clostridium botulinum BKT015925]
Length = 347
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 80/204 (39%), Gaps = 33/204 (16%)
Query: 9 WKDLWLPELAGRISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQVRLF- 56
W LW P+ +I MV+S R+ I T+ +Q L VR +
Sbjct: 151 WDALWNPKYKDQILMVDSQRDAIAVALKKLGYSINTRNKDELKKAEQELMKQKPLVRAYV 210
Query: 57 -DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 115
D L V G IAV WS D + +K N+ V+PK G++LW D IP S +
Sbjct: 211 GDEVKDLMVDEEGS--IAVVWSGDAVTMMKNNPNLRYVIPKEGSNLWFDNMVIPKGSAHK 268
Query: 116 TKQ---IGGRVRGPFPLIH-QWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGV 171
+ I R L + +I + A+ + E+L + D A
Sbjct: 269 KQAELFINFMTRPDISLKNVDYIGYSTPNAKTM----------EMLDPETKNDK---AAY 315
Query: 172 PPAEILARCEFLEPLSEATLSDYE 195
P E L +CE L + + DY+
Sbjct: 316 PEDEKLKKCEVFIDLGDF-IKDYD 338
>gi|229505000|ref|ZP_04394510.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae BX 330286]
gi|229511331|ref|ZP_04400810.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae B33]
gi|229515790|ref|ZP_04405249.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TMA 21]
gi|229518449|ref|ZP_04407893.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC9]
gi|229608003|ref|YP_002878651.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae MJ-1236]
gi|229345164|gb|EEO10138.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC9]
gi|229347559|gb|EEO12519.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TMA 21]
gi|229351296|gb|EEO16237.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae B33]
gi|229357223|gb|EEO22140.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae BX 330286]
gi|229370658|gb|ACQ61081.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae MJ-1236]
Length = 348
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 150 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 209
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 210 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 269
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 270 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQDVAPL--- 314
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 315 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 342
>gi|229523491|ref|ZP_04412896.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae bv. albensis VL426]
gi|229337072|gb|EEO02089.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae bv. albensis VL426]
Length = 348
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 150 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 209
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 210 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 269
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 270 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQDVAPL--- 314
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 315 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 342
>gi|120599867|ref|YP_964441.1| extracellular solute-binding protein [Shewanella sp. W3-18-1]
gi|146292197|ref|YP_001182621.1| extracellular solute-binding protein [Shewanella putrefaciens
CN-32]
gi|386312872|ref|YP_006009037.1| ABC polyamine transporter, periplasmic ligand-binding subunit, PotF
[Shewanella putrefaciens 200]
gi|120559960|gb|ABM25887.1| extracellular solute-binding protein, family 1 [Shewanella sp.
W3-18-1]
gi|145563887|gb|ABP74822.1| extracellular solute-binding protein, family 1 [Shewanella
putrefaciens CN-32]
gi|319425497|gb|ADV53571.1| ABC polyamine transporter, periplasmic ligand-binding subunit, PotF
[Shewanella putrefaciens 200]
Length = 366
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S DV A R + + +PK GA+LW D+
Sbjct: 217 VTYFHSSRYISDLANGDICVAYGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDML 276
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 277 AIPADAK 283
>gi|429215499|ref|ZP_19206659.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. M1]
gi|428153906|gb|EKX00459.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. M1]
Length = 361
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 9 WKDLWLPELAGRIS-----MVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
W L+ PE ++S ++SP E+I + A + LA +
Sbjct: 152 WAVLFEPENIKKLSACGVAFMDSPDEMIPSVLNYLGLDPNSTNPADYPKAEAKLAAVRPY 211
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
V F + Y+ G++ +A G+S DV A R +A +PK GA+LW DL
Sbjct: 212 VTYFHSSKYISDLANGNICVAFGYSGDVFQAAARAREAKNGIEIAYAIPKEGANLWFDLM 271
Query: 107 AIPA 110
AIP+
Sbjct: 272 AIPS 275
>gi|339487683|ref|YP_004702211.1| extracellular solute-binding protein [Pseudomonas putida S16]
gi|338838526|gb|AEJ13331.1| extracellular solute-binding protein [Pseudomonas putida S16]
Length = 403
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 5 GFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D P + + M +PR ++ A + L L + F + Y+
Sbjct: 212 AFMDSPDELFPAVLNYLGM--NPR----SEKPADYAKAEARLLELRPYITYFHSSKYVSD 265
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 109
GDV +A G+S DV A R +A +PK G++LW DL AIP
Sbjct: 266 LANGDVCVAFGYSGDVFQAANRAVEAKNGVKIAYSIPKEGSNLWFDLLAIP 316
>gi|217965101|ref|YP_002350779.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes HCC23]
gi|386007529|ref|YP_005925807.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Listeria monocytogenes L99]
gi|386026122|ref|YP_005946898.1| putative spermidine/putrescine uptake ABC transporter, substrate
binding protein [Listeria monocytogenes M7]
gi|217334371|gb|ACK40165.1| ABC transporter spermidine/putrescine binding protein [Listeria
monocytogenes HCC23]
gi|307570339|emb|CAR83518.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Listeria monocytogenes L99]
gi|336022703|gb|AEH91840.1| putative spermidine/putrescine uptake ABC transporter, substrate
binding protein [Listeria monocytogenes M7]
Length = 357
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 48/218 (22%)
Query: 5 GFKDWKDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQ-NL 46
F W L+ PEL +I +++ REV+G QAA ++ N+
Sbjct: 154 NFDTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNV 213
Query: 47 -ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 105
A++G++++L + + +AV +S + + ++ V+PK G++LW D
Sbjct: 214 KAIVGDEIKL--------LMADNEAGVAVTFSGEAAEMLSENEDLEYVIPKDGSNLWFDN 265
Query: 106 WAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVKLPEELLKG 159
IP + K + G H++I F L+ A + + T + +LL
Sbjct: 266 MVIPKTA----KNVDGA--------HKFINFMLKPENAAINAEYVGYATPNEKAVQLLPK 313
Query: 160 KPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
+ S D + P + L E + L + LS Y L
Sbjct: 314 EISSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 348
>gi|306833615|ref|ZP_07466742.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus bovis ATCC
700338]
gi|336064370|ref|YP_004559229.1| spermidine/putrescine transport system substrate-binding protein
[Streptococcus pasteurianus ATCC 43144]
gi|304424385|gb|EFM27524.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus bovis ATCC
700338]
gi|334282570|dbj|BAK30143.1| spermidine/putrescine transport system substrate-binding protein
[Streptococcus pasteurianus ATCC 43144]
Length = 357
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 80/210 (38%), Gaps = 24/210 (11%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALL 49
M EN + W DLW E A I +V+ REV+G T++ + A Q L L
Sbjct: 150 MVENAPEHWSDLWNSEYANDIMLVDGAREVMGIGLGTLGYSLNTKSLSELNAASQKLDDL 209
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
++ GD I V +S + + ++ VVP G++LW D IP
Sbjct: 210 TPNIKAIVGDEMKGYMINGDAAIGVTFSGEASEMLDSNEHLHYVVPSEGSNLWFDNLVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKPSLDTKL 167
++ V + I+ + E Q A + ++T +ELL D
Sbjct: 270 KTAK--------HVDEAYAFINFMLRPENAAQNAEYIGYSTPNDAAKELLPDDVKNDQ-- 319
Query: 168 IAGVPPAEILARCEFLEPLSEATLSDYEWL 197
A P + + E + L + L Y L
Sbjct: 320 -AFYPSEDTIENLEVYDNLGQKWLGIYNDL 348
>gi|433447823|ref|ZP_20411199.1| Spermidine/putrescine transport system substrate-binding protein
[Anoxybacillus flavithermus TNO-09.006]
gi|431999664|gb|ELK20580.1| Spermidine/putrescine transport system substrate-binding protein
[Anoxybacillus flavithermus TNO-09.006]
Length = 357
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 48/214 (22%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG--------TQAAAGRIAVQQ----------NL-ALL 49
W DLW P ++ +++ RE++G + R +QQ N+ A++
Sbjct: 158 WNDLWDPSFKNQVLLIDGAREIMGMALNSLHYSLNDTNRAHLQQAKQKLDKLTPNVKAIV 217
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G+++++ + + I + WS D + + V+PK G +LW D IP
Sbjct: 218 GDEIKM--------LLANEEAAIGIVWSGDAAEIMWENERLDYVIPKEGTNLWFDNMVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSL 163
+ K I G HQ+I F L Q A + ++T K E L +
Sbjct: 270 KTA----KNIEGA--------HQFINFMLDPKNAAQNAEYVGYSTPNKKALEYLPKEIVE 317
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
D + P ++ + E E ++TL+ Y L
Sbjct: 318 DERF---YPSEQLADKLEVYENPGKSTLAYYNEL 348
>gi|148550287|ref|YP_001270389.1| extracellular solute-binding protein [Pseudomonas putida F1]
gi|148514345|gb|ABQ81205.1| extracellular solute-binding protein, family 1 [Pseudomonas putida
F1]
Length = 364
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 40 IAVQQNLALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVV 93
+ +Q L + V F + Y+ GD+ +A G+S DV A K+ N+A
Sbjct: 202 VKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAKKGVNLAYA 261
Query: 94 VPKSGASLWADLWAIPAASR 113
+PK G +LW D+ AIP ++
Sbjct: 262 IPKEGGNLWFDVLAIPKDAK 281
>gi|378953501|ref|YP_005210989.1| protein SpuE/PotF2 [Pseudomonas fluorescens F113]
gi|359763515|gb|AEV65594.1| SpuE/PotF2 [Pseudomonas fluorescens F113]
Length = 365
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F+ + Y+ G++ +A G+S D+ A +R S ++A V+PK G +LW D+
Sbjct: 216 VTYFNSSKYISDLANGEICVAAGFSGDIFQARERASEAGKGVDIAYVIPKEGGNLWFDML 275
Query: 107 AIP 109
AIP
Sbjct: 276 AIP 278
>gi|328958141|ref|YP_004375527.1| spermidine/putrescine ABC transporter substrate binding lipoprotein
[Carnobacterium sp. 17-4]
gi|328674465|gb|AEB30511.1| spermidine/putrescine ABC transporter, substrate binding
lipoprotein precursor [Carnobacterium sp. 17-4]
Length = 357
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 32/211 (15%)
Query: 1 MNENGFKDWKDLWLPELAGRISMVNSPREVIGTQ-AAAGRIAVQQNLALLGNQVRLFDR- 58
++E+ + W DLW L ++ +++ RE+IG + G ++ L + D
Sbjct: 150 VDEDAIQHWDDLWNSSLKNKVMLIDGAREIIGLALDSEGHSLNSKDDEQLAAAAKKLDSL 209
Query: 59 --------THYLKVFGIG-DVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
+K++ I + +AV +S + + N+ V+P G++LW D + IP
Sbjct: 210 TPNVKAIVADEIKMYMIQEEASVAVTFSGEASEMLWENENLHYVIPSEGSNLWFDNFVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSL 163
++ F + +I F L Q A + ++T K ELL + +
Sbjct: 270 KTAK------------NFDAAYAFINFMLEPENAAQNAEYVGYSTPNKTALELLPSEITE 317
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDY 194
D + P E + E E L + Y
Sbjct: 318 DEQF---YPNEETMKNLEVYEDLGSEYIGIY 345
>gi|149204428|ref|ZP_01881395.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Roseovarius sp. TM1035]
gi|149142313|gb|EDM30360.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Roseovarius sp. TM1035]
Length = 362
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
++ F+ + Y+ GD+ +AVGWS D+L A R + + PK GA +W D
Sbjct: 212 HIQKFNSSEYINALANGDICVAVGWSGDILQARDRAAEADNGVEIVYNAPKEGAQMWFDQ 271
Query: 106 WAIP 109
AIP
Sbjct: 272 MAIP 275
>gi|47093931|ref|ZP_00231669.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 4b H7858]
gi|417314873|ref|ZP_12101566.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1816]
gi|422412245|ref|ZP_16489204.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
innocua FSL S4-378]
gi|422415289|ref|ZP_16492246.1| spermidine/putrescine-binding periplasmic protein PotD [Listeria
innocua FSL J1-023]
gi|422808896|ref|ZP_16857307.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Listeria monocytogenes FSL J1-208]
gi|47017691|gb|EAL08486.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 4b H7858]
gi|313619899|gb|EFR91458.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
innocua FSL S4-378]
gi|313624594|gb|EFR94576.1| spermidine/putrescine-binding periplasmic protein PotD [Listeria
innocua FSL J1-023]
gi|328467360|gb|EGF38440.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1816]
gi|378752510|gb|EHY63095.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Listeria monocytogenes FSL J1-208]
Length = 357
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 48/220 (21%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQ- 44
+ F W L+ PEL +I +++ REV+G QAA ++
Sbjct: 152 DKNFDTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTP 211
Query: 45 NL-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
N+ A++G++++L + + +AV +S + + ++ V+PK G++LW
Sbjct: 212 NVKAIVGDEIKL--------LMADNEAGVAVTFSGEAAEMLSENEDLEYVIPKDGSNLWF 263
Query: 104 DLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVKLPEELL 157
D IP + K + G H++I F L+ A + + T + +LL
Sbjct: 264 DNMVIPKTA----KNVDGA--------HKFINFMLKPENAAINAEYVGYATPNEKAVKLL 311
Query: 158 KGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
+ S D + P + L E + L + LS Y L
Sbjct: 312 PKEISSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 348
>gi|423119457|ref|ZP_17107141.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5246]
gi|376398515|gb|EHT11140.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5246]
Length = 370
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|260899656|ref|ZP_05908051.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ4037]
gi|308109449|gb|EFO46989.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ4037]
Length = 278
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 80 NDFQSWADLWKPELEGQVMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPN 139
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A N+ +V PK G W D +AI + +
Sbjct: 140 VLVFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGLNLKLVFPKEGGIGWVDNFAISSGA 199
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T V K L
Sbjct: 200 K------------NVEAAHKMIDFLLRPEIAEQISRDTGYLTAVTESNSKFKDVAPL--- 244
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + + T+ ++ +
Sbjct: 245 ----FPSQEDLDRVEWQDSVGDMTVKYEDYFL 272
>gi|157961031|ref|YP_001501065.1| extracellular solute-binding protein [Shewanella pealeana ATCC
700345]
gi|157846031|gb|ABV86530.1| extracellular solute-binding protein family 1 [Shewanella pealeana
ATCC 700345]
Length = 361
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 22/135 (16%)
Query: 1 MNENGFKDWKDLWLPELAGRIS-----MVNSPREVI-----------GTQAAAGRIAVQQ 44
+ E W+ L+ E + S MV++P EV+ +Q V++
Sbjct: 144 LGEQPLNTWELLFQAETVSKFSECGVAMVDAPSEVVSAMLKYLGKNPNSQNLDDLKLVEE 203
Query: 45 NLALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM------SNVAVVVPKSG 98
L + + F + Y+ G++ +A+GWS DV A R NV V+PK G
Sbjct: 204 RLLAIRPYITYFHSSSYVTDLASGNICLAMGWSGDVFMAANRALEANNGVNVDYVIPKEG 263
Query: 99 ASLWADLWAIPAASR 113
A WAD + I S+
Sbjct: 264 AQGWADTFNITNDSK 278
>gi|117928490|ref|YP_873041.1| twin-arginine translocation pathway signal protein [Acidothermus
cellulolyticus 11B]
gi|117648953|gb|ABK53055.1| Twin-arginine translocation pathway signal [Acidothermus
cellulolyticus 11B]
Length = 420
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 11 DLWLPELAGRISMVNSPRE--------VIGTQAAAGRIAVQQNLALLGNQ-----VRLFD 57
DLW L G++ M + + G G +Q A L Q VR +
Sbjct: 208 DLWDERLKGKVGMFADNEDLPNAVLVAMFGDPQKTGPNEWRQAAAKLKEQRDKGIVRQYY 267
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKR-MSNVAVVVPKSGASLWAD 104
Y+K GD+W + WS DV A+ SN+ V+PK G +W D
Sbjct: 268 EQDYIKALSNGDIWASQAWSGDVFQALASGASNLKFVIPKEGGVIWTD 315
>gi|300022947|ref|YP_003755558.1| family 1 extracellular solute-binding protein [Hyphomicrobium
denitrificans ATCC 51888]
gi|299524768|gb|ADJ23237.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans ATCC 51888]
Length = 370
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 106
V+ F + Y+ GD+ IAVG+S D+L A K + +PK GA +W D
Sbjct: 221 VQKFHSSEYINALANGDICIAVGYSGDILQARTRAQEAKNGQEIGYSLPKQGAQMWFDEM 280
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 281 AIPADAK 287
>gi|406914561|gb|EKD53728.1| spermidine/putrescine-binding periplasmic protein PotD [uncultured
bacterium]
Length = 348
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 85/217 (39%), Gaps = 37/217 (17%)
Query: 1 MNENGFKD-----WKDLWLPELAGRISMVNSPREVIG------------TQAAAGRIAVQ 43
MN+N F + W DL + A ++ +++ PRE T A + A
Sbjct: 137 MNKNYFSENEVLQWSDLLKKKYANQLMILDDPREAFSMALLMLGYSINDTNPAHIKQAYI 196
Query: 44 QNLALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
+ L+ N +RLF+ + D I + W+ D+ A S + V PK G +W
Sbjct: 197 KLRELMPN-IRLFNTDAVTSILIDEDATIGIAWNGDLFKANLENSQLMFVYPKDGFEIWV 255
Query: 104 DLWAI-PAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGK-- 160
D +AI +A E +Q++ F L+ A + + L K
Sbjct: 256 DNFAILKSAPHKENA-------------YQFLNFMLRPDIAKSVSININYATANLAAKNL 302
Query: 161 --PSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYE 195
PS+ + P A +L +F + +AT + YE
Sbjct: 303 MPPSIKNNSVL-YPSAALLRHGQFETDIGDATFALYE 338
>gi|419395467|ref|ZP_13936249.1| potF [Escherichia coli DEC15B]
gi|378250079|gb|EHY09987.1| potF [Escherichia coli DEC15B]
Length = 325
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T A +L L L +R F + Y+ G
Sbjct: 132 VSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANG 191
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 192 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|388543373|ref|ZP_10146664.1| extracellular solute-binding protein [Pseudomonas sp. M47T1]
gi|388278685|gb|EIK98256.1| extracellular solute-binding protein [Pseudomonas sp. M47T1]
Length = 362
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ G++ +A G+S DV A R ++A +PK GA+LW DL
Sbjct: 213 VTYFHSSKYVSDLANGNICVAFGYSGDVFQAANRAKEAKNGIHIAYAIPKEGANLWFDLL 272
Query: 107 AIPA 110
AIPA
Sbjct: 273 AIPA 276
>gi|121727550|ref|ZP_01680662.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
V52]
gi|121630134|gb|EAX62537.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
V52]
Length = 361
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 163 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 222
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 223 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 282
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 283 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQDVAPL--- 327
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 328 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 355
>gi|425080696|ref|ZP_18483793.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|428936123|ref|ZP_19009554.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae JHCK1]
gi|405605831|gb|EKB78835.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|426298988|gb|EKV61354.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae JHCK1]
Length = 370
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|388468123|ref|ZP_10142333.1| periplasmic putrescine-binding protein [Pseudomonas synxantha
BG33R]
gi|388011703|gb|EIK72890.1| periplasmic putrescine-binding protein [Pseudomonas synxantha
BG33R]
Length = 366
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+ F + Y+ G++ +A G+S DV A R N+A +P+ G++LW DL
Sbjct: 217 ITYFHSSKYISDLANGNICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPREGSNLWFDLL 276
Query: 107 AIPA 110
AIPA
Sbjct: 277 AIPA 280
>gi|339489912|ref|YP_004704440.1| extracellular solute-binding protein [Pseudomonas putida S16]
gi|338840755|gb|AEJ15560.1| extracellular solute-binding protein [Pseudomonas putida S16]
Length = 381
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKVF 65
F D D LP + + + + QAA ++ L + V F + Y+
Sbjct: 191 FLDSADEMLPAVLNYMGLDPNSTNAKDYQAA------EKKLLAVRPYVTYFHSSKYITDL 244
Query: 66 GIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 245 ANGDICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 298
>gi|377576361|ref|ZP_09805345.1| putrescine ABC transporter substrate binding periplasmic protein
[Escherichia hermannii NBRC 105704]
gi|377542393|dbj|GAB50510.1| putrescine ABC transporter substrate binding periplasmic protein
[Escherichia hermannii NBRC 105704]
Length = 370
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T + A L L L +R F + Y+ G
Sbjct: 177 VSFLDAPEEVFATVLNYLGKDPNSEKADDYTGPATELLLKLRPNIRYFHSSQYINDLANG 236
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIG 120
D+ +A+GW+ DV A R N++ ++PK GA + D++A+P A ++ E Q
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYIIPKEGALAFFDVFAMPTDAKNKEEAYQFL 296
Query: 121 GRVRGPFPLIH 131
+ P + H
Sbjct: 297 NYLMRPDVIAH 307
>gi|417858952|ref|ZP_12504009.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium tumefaciens F2]
gi|338824956|gb|EGP58923.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium tumefaciens F2]
Length = 365
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V+ F+ + Y+ GD I +GWS D+L A R V V+PK G +W D
Sbjct: 216 VKTFNSSAYIDELANGDSCITIGWSGDILQAKSRAEEAKNGVEVNYVIPKEGTYMWFDNL 275
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 276 AIPADAK 282
>gi|259046608|ref|ZP_05737009.1| spermidine/putrescine-binding periplasmic protein PotD
[Granulicatella adiacens ATCC 49175]
gi|259036773|gb|EEW38028.1| spermidine/putrescine-binding periplasmic protein PotD
[Granulicatella adiacens ATCC 49175]
Length = 362
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 24/199 (12%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W DLW E ++ +++ RE +G ++ A ++ L L + VR
Sbjct: 164 WGDLWKEEFKNKLLVLDGNREALGMALQSLGYSLNSKNETELKAAEEKLKELKSNVRAVL 223
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
+ + + I +G+S D + NV ++PK G+++W D +AI +
Sbjct: 224 NEEIKTMMKLEEAPIGMGYSGDAAAVAEENPNVQYILPKDGSAVWTDNFAIAHTAV---- 279
Query: 118 QIGGRVRGPFPLIHQWI--EFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVPPAE 175
V G + I+ + E + A + + T + +EL+ + + D P E
Sbjct: 280 ----NVEGAYAFINFMLRPENAAKNAEFVGYATPNEKAKELMDPEVTADETF---YPSEE 332
Query: 176 ILARCEFLEPLSEATLSDY 194
++ E E L ++ Y
Sbjct: 333 VIQSLEHYEFLGNEWITKY 351
>gi|431805015|ref|YP_007231918.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
gi|430795780|gb|AGA75975.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
Length = 364
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKVF 65
F D D LP + + + + QAA ++ L + V F + Y+
Sbjct: 174 FLDSADEMLPAVLNYMGLDPNSTNAKDYQAA------EKKLLAVRPYVTYFHSSKYITDL 227
Query: 66 GIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 228 ANGDICVAAGFSGDVFQAKTRAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|152969442|ref|YP_001334551.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206577099|ref|YP_002239497.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae 342]
gi|288936345|ref|YP_003440404.1| family 1 extracellular solute-binding protein [Klebsiella variicola
At-22]
gi|290510599|ref|ZP_06549969.1| periplasmic-binding component [Klebsiella sp. 1_1_55]
gi|329999807|ref|ZP_08303535.1| putrescine-binding periplasmic protein [Klebsiella sp. MS 92-3]
gi|378977921|ref|YP_005226062.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|402781600|ref|YP_006637146.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|419762541|ref|ZP_14288788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|419971965|ref|ZP_14487395.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419978771|ref|ZP_14494066.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419985544|ref|ZP_14500684.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419992759|ref|ZP_14507711.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995076|ref|ZP_14509884.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420003546|ref|ZP_14518191.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420009197|ref|ZP_14523682.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016570|ref|ZP_14530860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420021885|ref|ZP_14536060.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420025169|ref|ZP_14539179.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420032279|ref|ZP_14546095.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420039041|ref|ZP_14552681.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420043699|ref|ZP_14557185.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050082|ref|ZP_14563385.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056222|ref|ZP_14569381.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420061218|ref|ZP_14574209.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067945|ref|ZP_14580732.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072702|ref|ZP_14585337.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420077640|ref|ZP_14590104.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420083426|ref|ZP_14595708.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421909288|ref|ZP_16339108.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421915899|ref|ZP_16345491.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424934273|ref|ZP_18352645.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|425077462|ref|ZP_18480565.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425088095|ref|ZP_18491188.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|425090758|ref|ZP_18493843.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|428150839|ref|ZP_18998595.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428941619|ref|ZP_19014657.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae VA360]
gi|449057000|ref|ZP_21735513.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae hvKP1]
gi|150954291|gb|ABR76321.1| periplasmic putrescine-binding protein; permease protein
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|206566157|gb|ACI07933.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae 342]
gi|288891054|gb|ADC59372.1| extracellular solute-binding protein family 1 [Klebsiella variicola
At-22]
gi|289777315|gb|EFD85313.1| periplasmic-binding component [Klebsiella sp. 1_1_55]
gi|328538204|gb|EGF64354.1| putrescine-binding periplasmic protein [Klebsiella sp. MS 92-3]
gi|364517332|gb|AEW60460.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397351214|gb|EJJ44299.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397351358|gb|EJJ44442.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397352903|gb|EJJ45981.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397360172|gb|EJJ52854.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397368849|gb|EJJ61454.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397369366|gb|EJJ61967.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397374739|gb|EJJ67059.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397381977|gb|EJJ74142.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397385957|gb|EJJ78044.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397397726|gb|EJJ89398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397398046|gb|EJJ89712.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397403619|gb|EJJ95176.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397412009|gb|EJK03253.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397413505|gb|EJK04718.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397420859|gb|EJK11906.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427266|gb|EJK18047.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397431278|gb|EJK21955.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438769|gb|EJK29249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397445829|gb|EJK36062.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397451255|gb|EJK41343.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|397744722|gb|EJK91933.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|402542476|gb|AFQ66625.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|405593171|gb|EKB66623.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405602227|gb|EKB75369.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|405613736|gb|EKB86465.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|407808460|gb|EKF79711.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|410116845|emb|CCM81733.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410121811|emb|CCM88116.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426300139|gb|EKV62438.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae VA360]
gi|427539108|emb|CCM94733.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448875441|gb|EMB10458.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae hvKP1]
Length = 370
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|432552849|ref|ZP_19789579.1| putrescine-binding periplasmic protein [Escherichia coli KTE47]
gi|431086421|gb|ELD92444.1| putrescine-binding periplasmic protein [Escherichia coli KTE47]
Length = 325
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T A +L L L +R F + Y+ G
Sbjct: 132 VSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANG 191
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 192 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|421529430|ref|ZP_15975965.1| extracellular solute-binding protein [Pseudomonas putida S11]
gi|402213158|gb|EJT84520.1| extracellular solute-binding protein [Pseudomonas putida S11]
Length = 288
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 5 GFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D LP + + + + QAA ++ L + V F + Y+
Sbjct: 97 AFLDSADEMLPAVLNYMGLDPNSTNAKDYQAA------EKKLLAVRPYVTYFHSSKYITD 150
Query: 65 FGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 113
GD+ +A G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 151 LANGDICVAAGFSGDVFQAKTRAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 205
>gi|386704035|ref|YP_006167882.1| putrescine ABC transporter periplasmic-binding protein, partial
[Escherichia coli P12b]
gi|383102203|gb|AFG39712.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli P12b]
Length = 298
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T A +L L L +R F + Y+ G
Sbjct: 105 VSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANG 164
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 165 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 215
>gi|229529505|ref|ZP_04418895.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae 12129(1)]
gi|229333279|gb|EEN98765.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae 12129(1)]
Length = 366
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 168 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 227
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 228 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 287
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 288 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQDVAPL--- 332
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 333 ----FPSQEDLDRVEWQSAVDDKTVKYEEYFM 360
>gi|388256493|ref|ZP_10133674.1| extracellular solute-binding protein, family 1 [Cellvibrio sp. BR]
gi|387940193|gb|EIK46743.1| extracellular solute-binding protein, family 1 [Cellvibrio sp. BR]
Length = 357
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 42/205 (20%)
Query: 9 WKDLWLPELAGRISMVNSPRE-------VIGTQAAAGR----IAVQQNLALLGNQVRLFD 57
W DLW PE AG++ +++ R+ V G Q + A + L L +++ +
Sbjct: 160 WADLWKPEYAGKLMIMDDVRDNFYVGLRVAGFQNNSTNEEEIKAAYEKLKALWPSIKVIN 219
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP-AASRLET 116
G+V I W+ + A + M N+ + P+ GA LW D + IP A+ +E
Sbjct: 220 SDSPKTPLIQGNVSIGAIWNGEAYMAQQEMENLQYIYPEEGAVLWVDSFVIPKGAANVEN 279
Query: 117 KQIGGRVRGPFPLIHQWIEFCL----------QTARALPFNTRVKLPEELLKGKPSLDTK 166
H++I+F L + A P + L +E L+ ++
Sbjct: 280 A-------------HKFIDFMLRAESAKAAIEELGYAAPNTAGIALLDEALRTNKTV--- 323
Query: 167 LIAGVPPAEILARCEFLEPLSEATL 191
P A +A+ F + L + L
Sbjct: 324 ----FPAAGDIAKGSFHQDLGDTVL 344
>gi|386034068|ref|YP_005953981.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae KCTC 2242]
gi|424829863|ref|ZP_18254591.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|339761196|gb|AEJ97416.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae KCTC 2242]
gi|414707288|emb|CCN28992.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae subsp. pneumoniae Ecl8]
Length = 370
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|238893913|ref|YP_002918647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238546229|dbj|BAH62580.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
Length = 376
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 226 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 285
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 286 FAMPADAK 293
>gi|429210720|ref|ZP_19201886.1| extracellular solute-binding protein [Pseudomonas sp. M1]
gi|428158134|gb|EKX04681.1| extracellular solute-binding protein [Pseudomonas sp. M1]
Length = 365
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ G++ +A G+S DV A R N+A +PK GA+LW D+
Sbjct: 216 VTYFHSSKYISDLANGNICVAAGFSGDVFQAANRAKEAGKGVNIAYAIPKEGANLWFDIL 275
Query: 107 AIP 109
AIP
Sbjct: 276 AIP 278
>gi|15641436|ref|NP_231068.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121590946|ref|ZP_01678267.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
2740-80]
gi|153827254|ref|ZP_01979921.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
MZO-2]
gi|227081597|ref|YP_002810148.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio cholerae M66-2]
gi|254286128|ref|ZP_04961088.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
AM-19226]
gi|254848545|ref|ZP_05237895.1| spermidine/putrescine ABC transporter [Vibrio cholerae MO10]
gi|297579013|ref|ZP_06940941.1| spermidine/putrescine ABC transporter [Vibrio cholerae RC385]
gi|298498496|ref|ZP_07008303.1| spermidine/putrescine ABC transporter [Vibrio cholerae MAK 757]
gi|9655923|gb|AAF94582.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121547221|gb|EAX57346.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
2740-80]
gi|149738834|gb|EDM53174.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
MZO-2]
gi|150423797|gb|EDN15738.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
AM-19226]
gi|227009485|gb|ACP05697.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
M66-2]
gi|254844250|gb|EET22664.1| spermidine/putrescine ABC transporter [Vibrio cholerae MO10]
gi|297536607|gb|EFH75440.1| spermidine/putrescine ABC transporter [Vibrio cholerae RC385]
gi|297542829|gb|EFH78879.1| spermidine/putrescine ABC transporter [Vibrio cholerae MAK 757]
Length = 366
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 168 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 227
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 228 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 287
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T VK + + L
Sbjct: 288 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQDVAPL--- 332
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 333 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 360
>gi|424909501|ref|ZP_18332878.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392845532|gb|EJA98054.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 365
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V+ F+ + Y+ GD I +GWS D+L A R V V+PK G +W D
Sbjct: 216 VKTFNSSAYIDELANGDSCITIGWSGDILQAKSRAEEAKNGVEVNYVIPKEGTYMWFDNL 275
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 276 AIPADAK 282
>gi|420330059|ref|ZP_14831756.1| putrescine-binding periplasmic domain protein [Shigella flexneri
K-1770]
gi|391258105|gb|EIQ17211.1| putrescine-binding periplasmic domain protein [Shigella flexneri
K-1770]
Length = 289
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T A +L L L +R F + Y+ G
Sbjct: 96 VSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANG 155
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 156 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 206
>gi|419305443|ref|ZP_13847353.1| putrescine-binding periplasmic protein [Escherichia coli DEC11D]
gi|378151922|gb|EHX13024.1| putrescine-binding periplasmic protein [Escherichia coli DEC11D]
Length = 325
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T A +L L L +R F + Y+ G
Sbjct: 132 VSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANG 191
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 192 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|3891734|pdb|1A99|A Chain A, Putrescine Receptor (Potf) From E. Coli
gi|3891735|pdb|1A99|B Chain B, Putrescine Receptor (Potf) From E. Coli
gi|3891736|pdb|1A99|C Chain C, Putrescine Receptor (Potf) From E. Coli
gi|3891737|pdb|1A99|D Chain D, Putrescine Receptor (Potf) From E. Coli
Length = 344
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T A +L L L +R F + Y+ G
Sbjct: 151 VSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANG 210
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 211 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 261
>gi|338174752|ref|YP_004651562.1| spermidine/putrescine-binding periplasmic protein [Parachlamydia
acanthamoebae UV-7]
gi|336479110|emb|CCB85708.1| spermidine/putrescine-binding periplasmic protein [Parachlamydia
acanthamoebae UV-7]
Length = 343
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 80/211 (37%), Gaps = 54/211 (25%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGT------------------QAAAGRIAVQQNLALLG 50
W+ +L GR++M+N RE +G QAA+ I ++NLA
Sbjct: 146 WEIFARRDLKGRMTMLNDVREALGAALKSLGYSLNSTDDFQIAQAASTLINWKRNLAK-- 203
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
FD Y + + G+S D++ ++ +N+ ++ P+ G ++ D IP
Sbjct: 204 -----FDSEQYKNGIASAEYLVVQGYSGDLIQVMQEDANIGILYPQEGTAISIDEIIIPK 258
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARAL----------PFNTRVKLPEELLKGK 160
+ L H +I F L+ RA P + ++
Sbjct: 259 HA------------PEVQLAHAFINFLLEPKRAAENMEFVFFISPNTAAAQYLSPKVRNN 306
Query: 161 PSLDTKLIAGVPPAEILARCEFLEPLSEATL 191
P+L+ P EIL R E + LSE +
Sbjct: 307 PALNL-------PNEILQRSEVIHDLSENNI 330
>gi|77405839|ref|ZP_00782922.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae H36B]
gi|77175549|gb|EAO78335.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae H36B]
Length = 357
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 11/118 (9%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
K W DLW PE +I +V+S REVIG T+ + A + L L V+
Sbjct: 156 KHWDDLWRPEFRNKIMLVDSAREVIGVGLNSLGYGLNTKNISELKAASKKLDALTPNVKA 215
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
GD I V +S + + ++ VVP G++LW D IP +
Sbjct: 216 IVADEMKGYMIQGDAAIGVTFSGEAREMLDGNKHLHYVVPSEGSNLWFDNIVIPKTVK 273
>gi|390951419|ref|YP_006415178.1| spermidine/putrescine-binding periplasmic protein [Thiocystis
violascens DSM 198]
gi|390427988|gb|AFL75053.1| spermidine/putrescine-binding periplasmic protein [Thiocystis
violascens DSM 198]
Length = 367
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 23/138 (16%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A G+S DVL A +R ++ +P+ GA+LW D+
Sbjct: 217 HIRYFHSSQYISDLANGDLCVAHGYSGDVLQAQERAEEAGKGVDLEYRIPREGAALWTDV 276
Query: 106 WAIPAASRLETKQIGGRVRGPFP-LIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLD 164
AIP + P P H +I + L + V L P +D
Sbjct: 277 MAIPKDA-------------PNPAAAHAFIAYLLDPKVIAAASDYVYYANPNLAATPLID 323
Query: 165 TKLIAG---VPPAEILAR 179
+ L PPAE+ R
Sbjct: 324 SDLRGNPGIYPPAEVKQR 341
>gi|365139255|ref|ZP_09345724.1| putrescine-binding periplasmic protein [Klebsiella sp. 4_1_44FAA]
gi|363654420|gb|EHL93323.1| putrescine-binding periplasmic protein [Klebsiella sp. 4_1_44FAA]
Length = 370
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|91209888|ref|YP_539874.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli UTI89]
gi|117623034|ref|YP_851947.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli APEC O1]
gi|237707182|ref|ZP_04537663.1| putrescine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
gi|300991852|ref|ZP_07179677.1| bacterial extracellular solute-binding protein [Escherichia coli MS
200-1]
gi|331646122|ref|ZP_08347225.1| putrescine-binding periplasmic protein [Escherichia coli M605]
gi|422358904|ref|ZP_16439553.1| bacterial extracellular solute-binding protein [Escherichia coli MS
110-3]
gi|422368868|ref|ZP_16449272.1| bacterial extracellular solute-binding protein [Escherichia coli MS
16-3]
gi|422375650|ref|ZP_16455913.1| bacterial extracellular solute-binding protein [Escherichia coli MS
60-1]
gi|422378970|ref|ZP_16459173.1| bacterial extracellular solute-binding protein [Escherichia coli MS
57-2]
gi|91071462|gb|ABE06343.1| putrescine-binding periplasmic protein precursor [Escherichia coli
UTI89]
gi|115512158|gb|ABJ00233.1| putrescine-binding periplasmic protein precursor [Escherichia coli
APEC O1]
gi|226898392|gb|EEH84651.1| putrescine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
gi|300305462|gb|EFJ59982.1| bacterial extracellular solute-binding protein [Escherichia coli MS
200-1]
gi|315287314|gb|EFU46725.1| bacterial extracellular solute-binding protein [Escherichia coli MS
110-3]
gi|315299397|gb|EFU58649.1| bacterial extracellular solute-binding protein [Escherichia coli MS
16-3]
gi|324009780|gb|EGB78999.1| bacterial extracellular solute-binding protein [Escherichia coli MS
57-2]
gi|324013016|gb|EGB82235.1| bacterial extracellular solute-binding protein [Escherichia coli MS
60-1]
gi|331044874|gb|EGI17001.1| putrescine-binding periplasmic protein [Escherichia coli M605]
Length = 418
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 268 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 327
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 328 FAMPADAK 335
>gi|426412095|ref|YP_007032194.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
gi|426270312|gb|AFY22389.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
Length = 370
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 37/207 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI----------GTQAAAGRIAVQQNLAL-LGNQ 52
W L+ PE A + IS ++SP E+I ++A + L L +
Sbjct: 161 WDLLFKPENAAKLKSCGISFLDSPTEMIPVALHYLGYPTDSQDKKQLAEAEALFLKIRPS 220
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ G++ +AVG+S D+ A R V+ +PK GA + D+
Sbjct: 221 VGYFHSSKYISDLANGNICVAVGYSGDIYQAKSRAEEAGDKVKVSYNIPKEGAGSFYDMV 280
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTK 166
AIP + V G + +++ F + V+ P P +D +
Sbjct: 281 AIPKDAE--------NVEGAY----KFMTFLQKPEIMAEITNAVRFPNGNAAATPLVDKE 328
Query: 167 LIAG---VPPAEILARCEFLEPLSEAT 190
+ A PPA++LA+ + L AT
Sbjct: 329 ITADPGIYPPADVLAKLYAIADLPAAT 355
>gi|425738066|ref|ZP_18856334.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus massiliensis S46]
gi|425480551|gb|EKU47716.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus massiliensis S46]
Length = 357
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 23/145 (15%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAV-----------QQNLALLGNQVR 54
F W DL P+L I +V+S RE++G ++ Q LA L V+
Sbjct: 155 FNSWNDLLKPQLKQDILLVDSAREIVGIALNMNHDSLNTTDPEKLKEAQLKLAKLAPNVK 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 114
+ + +AV WS +P V VVP+ G++LW D IP S+
Sbjct: 215 GVVGDELPLMLEQQEAHVAVVWSGVAMPIVTENDTYQYVVPQEGSNLWFDNMVIPKTSQ- 273
Query: 115 ETKQIGGRVRGPFPLIHQWIEFCLQ 139
V G H++I+F L+
Sbjct: 274 -------NVDGA----HRFIDFLLR 287
>gi|398868530|ref|ZP_10623927.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398232984|gb|EJN18932.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 365
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A+G+S D+ A R + N+A +PK G +LW D+
Sbjct: 216 VTYFHSSKYIADLANGDICVAIGFSGDMFQARNRAAEAKKGVNIAYSIPKEGGALWFDML 275
Query: 107 AIPAAS 112
AIP S
Sbjct: 276 AIPKDS 281
>gi|418945897|ref|ZP_13498573.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Escherichia coli O157:H43 str.
T22]
gi|375318787|gb|EHS65157.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Escherichia coli O157:H43 str.
T22]
Length = 288
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T A +L L L +R F + Y+ G
Sbjct: 95 VSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANG 154
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 155 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 205
>gi|398857089|ref|ZP_10612792.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
gi|398241403|gb|EJN27055.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
Length = 370
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 82/207 (39%), Gaps = 37/207 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGNQ 52
W L+ PE A + IS ++SP E+I TQ + +
Sbjct: 161 WDLLFKPENAAKLKSCGISFLDSPTEMIPVALHYLGYPTDTQDKKQLAEAEALFLKIRPS 220
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ G++ +AVG+S D+ A R + V+ +PK GA + D+
Sbjct: 221 VGYFHSSKYISDLANGNICVAVGYSGDIYQAKARAAEAGDKVKVSYNIPKEGAGSFYDMV 280
Query: 107 AIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTK 166
AIP + V G + +++ F + V+ P P ++ +
Sbjct: 281 AIPKDAE--------NVEGAY----KFMTFLQKPEIMAEITNAVRFPNGNAAATPLVEKE 328
Query: 167 LIAG---VPPAEILARCEFLEPLSEAT 190
+ A PPAE+LA+ + L AT
Sbjct: 329 ITADPGIYPPAEVLAKLYAIADLPAAT 355
>gi|114331324|ref|YP_747546.1| extracellular solute-binding protein [Nitrosomonas eutropha C91]
gi|114308338|gb|ABI59581.1| extracellular solute-binding protein, family 1 [Nitrosomonas
eutropha C91]
Length = 369
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 40/201 (19%)
Query: 13 WLPELAGRISMVNSPREVIG--------TQAAAGRIAVQQNLALLGNQVRL------FDR 58
+L ++ GRI++++S RE++ + + QQ AL+ +R F
Sbjct: 170 YLKKIKGRITVLDSQRELMAAALKYLGYSASDTDENHWQQAKALI---IRAKPYWAAFSN 226
Query: 59 THYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAAS 112
T Y++ IG++W+A G+S+D+ A R +V V+P+ GA L D + +
Sbjct: 227 TSYIRELAIGNLWVAHGYSNDMYQAALDAKKTGRRFSVDFVIPREGAVLSLDSMVLHHS- 285
Query: 113 RLETKQIGGRVRGPFP-LIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAG- 170
G P L H++I F L+ + L +P + ++IA
Sbjct: 286 ------------GHRPDLAHRFINFMLEGKNSAELTNLTGSGNPNLAARPYIHPEIIANH 333
Query: 171 --VPPAEILARCEFLEPLSEA 189
P L+R E L ++
Sbjct: 334 AIFPDTAQLSRLEMLHDINHT 354
>gi|22537266|ref|NP_688117.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae 2603V/R]
gi|77413025|ref|ZP_00789227.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 515]
gi|410594609|ref|YP_006951336.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
agalactiae SA20-06]
gi|421532211|ref|ZP_15978578.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
STIR-CD-17]
gi|22534134|gb|AAM99989.1|AE014242_18 spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 2603V/R]
gi|77160923|gb|EAO72032.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 515]
gi|403642577|gb|EJZ03410.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
STIR-CD-17]
gi|410518248|gb|AFV72392.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
agalactiae SA20-06]
Length = 357
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 11/118 (9%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
K W DLW PE +I +V+S REVIG T+ + A + L L V+
Sbjct: 156 KHWDDLWRPEFRNKIMLVDSAREVIGVGLNSLGYGLNTKNISELKAASKKLDALTPNVKA 215
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
GD I V +S + + ++ VVP G++LW D IP +
Sbjct: 216 IVADEMKGYMIQGDAAIGVTFSGEAREMLDGNKHLHYVVPSEGSNLWFDNIVIPKTVK 273
>gi|28558948|ref|NP_788208.1| RC221 [Ruegeria sp. PR1b]
gi|22726499|gb|AAN05294.1| RC221 [Ruegeria sp. PR1b]
Length = 428
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 22/123 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQ 52
W ++ P+ A + I++++SP EV+ T+ A + + +
Sbjct: 219 WDMIFDPDTAAKLADCGIALLDSPTEVLAPALNYLGLDPNTEDKADLAKAEALMMSIRPH 278
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
+R F+ + Y+ GD+ + +G+S DVL A R + V +P+ GA + D+
Sbjct: 279 IRYFNSSQYINDLANGDICVTLGYSGDVLQARDRAAEAGQGIRVTYTIPREGAQIGFDML 338
Query: 107 AIP 109
AIP
Sbjct: 339 AIP 341
>gi|398350258|ref|YP_006395722.1| putrescine-binding periplasmic protein PotF [Sinorhizobium fredii
USDA 257]
gi|390125584|gb|AFL48965.1| putrescine-binding periplasmic protein PotF [Sinorhizobium fredii
USDA 257]
Length = 364
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 22/125 (17%)
Query: 8 DWKDLWLPELAGR-----ISMVNSPREVI-----------GTQAAAGRIAVQQNLALLGN 51
+W ++ PE+A + I +++SP ++I + A + L +
Sbjct: 154 NWDVVFNPEIAAKFKDCGIHLLDSPTDIIPSALAYLGLNPDSHEQADLDKAAELLLKVRP 213
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +AVG+S D+ A R + V +P GA +W D+
Sbjct: 214 YIRKFHSSEYINALANGDICLAVGFSGDIFQARDRAAEAKSGVTVDYSIPAQGAQMWFDM 273
Query: 106 WAIPA 110
AIPA
Sbjct: 274 LAIPA 278
>gi|25011226|ref|NP_735621.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae NEM316]
gi|76797917|ref|ZP_00780179.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 18RS21]
gi|77408716|ref|ZP_00785448.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae COH1]
gi|77410532|ref|ZP_00786893.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae CJB111]
gi|421147260|ref|ZP_15606950.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
GB00112]
gi|23095650|emb|CAD46834.1| Unknown [Streptococcus agalactiae NEM316]
gi|76586754|gb|EAO63250.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 18RS21]
gi|77163480|gb|EAO74430.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae CJB111]
gi|77172691|gb|EAO75828.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae COH1]
gi|401685938|gb|EJS81928.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
GB00112]
Length = 357
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 11/118 (9%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
K W DLW PE +I +V+S REVIG T+ + A + L L V+
Sbjct: 156 KHWDDLWRPEFRNKIMLVDSAREVIGVGLNSLGYGLNTKNISELKAASKKLDALTPNVKA 215
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
GD I V +S + + ++ VVP G++LW D IP +
Sbjct: 216 IVADEMKGYMIQGDAAIGVTFSGEAREMLDGNKHLHYVVPSEGSNLWFDNIVIPKTVK 273
>gi|374703154|ref|ZP_09710024.1| extracellular solute-binding protein [Pseudomonas sp. S9]
Length = 364
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 22/127 (17%)
Query: 9 WKDLWLPELAGR-----ISMVNSPREVIGT-----------QAAAGRIAVQQNLALLGNQ 52
W ++ PE + +SM+++P EV Q+ ++ L +
Sbjct: 155 WDIIFKPENMDKLKSCGVSMLDAPEEVYAAALHYLGLNPIAQSVEDVKKAEELLLKVRPD 214
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
V F + Y+ G++ +A+GWS DV A R V+ V+PK GA+ + D+
Sbjct: 215 VTYFHSSKYISDLANGNICVALGWSGDVFQAEARAEEAKNGVPVSYVIPKEGAAAFFDMM 274
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 275 AIPADAK 281
>gi|338997731|ref|ZP_08636423.1| extracellular solute-binding protein [Halomonas sp. TD01]
gi|338765360|gb|EGP20300.1| extracellular solute-binding protein [Halomonas sp. TD01]
Length = 367
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 46 LALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGA 99
+A + + + F + Y+ GD+ +A G+S D+ A R + +PK GA
Sbjct: 211 IANIRDNITYFHSSRYVSDLANGDICVAAGYSGDIFQAADRAEEAGRDFTIGYSIPKEGA 270
Query: 100 SLWADLWAIPA 110
+LW D+ A+PA
Sbjct: 271 ALWFDMMAVPA 281
>gi|422800217|ref|ZP_16848715.1| extracellular solute-binding protein [Escherichia coli M863]
gi|323967289|gb|EGB62712.1| extracellular solute-binding protein [Escherichia coli M863]
Length = 395
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|258623285|ref|ZP_05718291.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio mimicus
VM573]
gi|258625960|ref|ZP_05720826.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio mimicus
VM603]
gi|424809707|ref|ZP_18235080.1| spermidine/putrescine ABC transporter [Vibrio mimicus SX-4]
gi|258581751|gb|EEW06634.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio mimicus
VM603]
gi|258584417|gb|EEW09160.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio mimicus
VM573]
gi|342322804|gb|EGU18591.1| spermidine/putrescine ABC transporter [Vibrio mimicus SX-4]
Length = 366
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 168 NDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPN 227
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A K + +V PK G W D +AI + +
Sbjct: 228 VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNFAISSGA 287
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T V+ + K L
Sbjct: 288 K------------NVDAAHKMIDFLLRPEIAEQISRDTGYLTGVQASNDKFKDVAPL--- 332
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + T+ E+ +
Sbjct: 333 ----FPSQEDLDRVEWQSAVGDKTVKYEEYFM 360
>gi|424036604|ref|ZP_17775598.1| bacterial extracellular solute-binding family protein, partial
[Vibrio cholerae HENC-02]
gi|408896441|gb|EKM32531.1| bacterial extracellular solute-binding family protein, partial
[Vibrio cholerae HENC-02]
Length = 235
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 42/206 (20%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 37 NDFQSWADLWKPELEGQVMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPN 96
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A N+ +V PK G W D +AI + +
Sbjct: 97 VLVFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGMNLKLVFPKEGGIGWVDNFAISSGA 156
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVP 172
+ H+ I+F L R ++ E++ S DT + V
Sbjct: 157 K------------NVEAAHKMIDFLL----------RPEIAEQI-----SADTGYLTAV- 188
Query: 173 PAEILARCEFLEPL--SEATLSDYEW 196
AE A+ + + PL S+ L EW
Sbjct: 189 -AESNAKFKDVAPLFPSQEDLDRVEW 213
>gi|422782310|ref|ZP_16835095.1| extracellular solute-binding protein [Escherichia coli TW10509]
gi|323976761|gb|EGB71849.1| extracellular solute-binding protein [Escherichia coli TW10509]
Length = 395
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|188496410|ref|ZP_03003680.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 53638]
gi|188491609|gb|EDU66712.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 53638]
Length = 420
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 270 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 329
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 330 FAMPADAK 337
>gi|78063626|ref|YP_373534.1| ABC spermidine/putrescine transporter, periplasmic ligand binding
protein [Burkholderia sp. 383]
gi|77971511|gb|ABB12890.1| ABC spermidine/putrescine transporter, periplasmic ligand binding
protein [Burkholderia sp. 383]
Length = 371
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 84/211 (39%), Gaps = 39/211 (18%)
Query: 2 NENGFKDWKDLWLPELAGR-----ISMVNSPREVIG-----------TQAAAGRIAVQQN 45
N+ W L+ P+ A + IS+++SP + G T A A +
Sbjct: 156 NDAPLDSWALLFDPKYAQKLKHCGISVLDSPVDAFGMAFVYLKKDPNTTNPADYQAAYEL 215
Query: 46 LALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPA------VKRMSNVAVVVPKSGA 99
L + + F+ + Y+ GD+ +A+GWS DV A K+ ++ V+P G+
Sbjct: 216 LKTVRPYITQFNSSSYINDLAGGDICLALGWSGDVNSARIAAASAKKPYHIKYVIPTEGS 275
Query: 100 SLWADLWAIPAASRLETKQIGGRVRGPFP-LIHQWIEFCLQTARALPFNTRVKLPEELLK 158
++W D+ A+P P P +++ F L + P +
Sbjct: 276 AMWFDMMAVPK-------------DAPHPDAALKFVNFVLSEKESANLTNDTSYPSAVPS 322
Query: 159 GKPSLDTKLI---AGVPPAEILARCEFLEPL 186
K + ++ A PPA+++ + +P+
Sbjct: 323 SKHLVRAEVTSDPAVFPPADVIRKLSLSKPV 353
>gi|26246877|ref|NP_752917.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CFT073]
gi|227884182|ref|ZP_04001987.1| putrescine ABC superfamily ATP binding cassette transporter
periplasmic substrate-binding protein [Escherichia coli
83972]
gi|300993458|ref|ZP_07180400.1| bacterial extracellular solute-binding protein [Escherichia coli MS
45-1]
gi|301051218|ref|ZP_07198047.1| bacterial extracellular solute-binding protein [Escherichia coli MS
185-1]
gi|386628394|ref|YP_006148114.1| putrescine transporter subunit [Escherichia coli str. 'clone D i2']
gi|386633314|ref|YP_006153033.1| putrescine transporter subunit [Escherichia coli str. 'clone D
i14']
gi|422364764|ref|ZP_16445275.1| bacterial extracellular solute-binding protein [Escherichia coli MS
153-1]
gi|26107277|gb|AAN79460.1|AE016758_64 Putrescine-binding periplasmic protein precursor [Escherichia coli
CFT073]
gi|227838934|gb|EEJ49400.1| putrescine ABC superfamily ATP binding cassette transporter
periplasmic substrate-binding protein [Escherichia coli
83972]
gi|300297125|gb|EFJ53510.1| bacterial extracellular solute-binding protein [Escherichia coli MS
185-1]
gi|300406572|gb|EFJ90110.1| bacterial extracellular solute-binding protein [Escherichia coli MS
45-1]
gi|315292529|gb|EFU51881.1| bacterial extracellular solute-binding protein [Escherichia coli MS
153-1]
gi|355419293|gb|AER83490.1| putrescine transporter subunit [Escherichia coli str. 'clone D i2']
gi|355424213|gb|AER88409.1| putrescine transporter subunit [Escherichia coli str. 'clone D
i14']
Length = 418
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 268 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 327
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 328 FAMPADAK 335
>gi|339301436|ref|ZP_08650537.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus agalactiae
ATCC 13813]
gi|319745106|gb|EFV97431.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus agalactiae
ATCC 13813]
Length = 357
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 11/118 (9%)
Query: 7 KDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRL 55
K W DLW PE +I +V+S REVIG T+ + A + L L V+
Sbjct: 156 KHWDDLWRPEFRNKIMLVDSAREVIGVGLNSLGYGLNTKNISELKAASKKLDALTPNVKA 215
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
GD I V +S + + ++ VVP G++LW D IP +
Sbjct: 216 IVADEMKGYMIQGDAAIGVTFSGEAREMLDGNKHLHYVVPSEGSNLWFDNIVIPKTVK 273
>gi|312193930|ref|YP_004013991.1| extracellular solute-binding protein [Frankia sp. EuI1c]
gi|311225266|gb|ADP78121.1| extracellular solute-binding protein family 1 [Frankia sp. EuI1c]
Length = 414
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 21/118 (17%)
Query: 9 WKDLWLPELAGRISMVNSPREV-------------IGTQA----AAGRIAVQQNLALLGN 51
++DL+ P G + M ++ T+A AA ++ Q++ +
Sbjct: 215 YEDLFDPAFKGHVGMFGDNEDLPNFCMVGMGIKPETSTEADWKNAAAKLTKQRDDGI--- 271
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
VR + Y+ GD+W+++ WS DV N+ VVPK G W D IP
Sbjct: 272 -VRKYYDQGYIDALASGDLWLSMAWSGDVYQQQAGGKNLKFVVPKEGGLFWTDNMCIP 328
>gi|238022429|ref|ZP_04602855.1| hypothetical protein GCWU000324_02336 [Kingella oralis ATCC 51147]
gi|237867043|gb|EEP68085.1| hypothetical protein GCWU000324_02336 [Kingella oralis ATCC 51147]
Length = 382
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 33/154 (21%)
Query: 7 KDWKDLWLPELAGR-----ISMVNSPRE-------VIG----TQAAAGRIAVQQNLALLG 50
+W ++ PE G+ IS +SP E IG + A A + + +
Sbjct: 172 NEWDLVFNPEYTGKLKHCGISFFDSPTEQFPLVLKYIGKDPNSNDKADLEAAAETMRKVR 231
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM-----SNVAVVVPKSGASLWADL 105
+ VRLF + Y+ G++ +A+G+ D+ A +R +++ V+ PK+G +W D
Sbjct: 232 HDVRLFSSSGYINNLAQGNLCVAIGYGGDLNIAKRRAAEIGNNDIQVLTPKTGVGIWIDS 291
Query: 106 WAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ 139
+ IP + K I H++I + L
Sbjct: 292 FMIPK----DAKNIAN--------AHKYINYTLD 313
>gi|261339163|ref|ZP_05967021.1| hypothetical protein ENTCAN_05386 [Enterobacter cancerogenus ATCC
35316]
gi|288319007|gb|EFC57945.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Enterobacter cancerogenus ATCC 35316]
Length = 370
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|160874318|ref|YP_001553634.1| extracellular solute-binding protein [Shewanella baltica OS195]
gi|378707564|ref|YP_005272458.1| extracellular solute-binding protein [Shewanella baltica OS678]
gi|160859840|gb|ABX48374.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS195]
gi|315266553|gb|ADT93406.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS678]
Length = 366
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S DV A R + + +PK GA+LW D+
Sbjct: 217 VTYFHSSRYISDLANGDICVAFGFSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDML 276
Query: 107 AIPAAS 112
AIPA S
Sbjct: 277 AIPADS 282
>gi|424045745|ref|ZP_17783310.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HENC-03]
gi|408886074|gb|EKM24767.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HENC-03]
Length = 343
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 42/206 (20%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWADLWKPELEGQVMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A N+ +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGMNLKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVP 172
+ H+ I+F L R ++ E++ S DT + V
Sbjct: 265 K------------NVEAAHKMIDFLL----------RPEIAEQI-----SADTGYLTAV- 296
Query: 173 PAEILARCEFLEPL--SEATLSDYEW 196
AE A+ + + PL S+ L EW
Sbjct: 297 -AESNAKFKDVAPLFPSQEDLDRVEW 321
>gi|300871274|ref|YP_003786147.1| spermidine/putrescine transport ATP-binding protein PotD
[Brachyspira pilosicoli 95/1000]
gi|300688975|gb|ADK31646.1| spermidine/putrescine transport ATP binding protein, PotD
[Brachyspira pilosicoli 95/1000]
Length = 400
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 42/205 (20%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIGTQAA--------AGRIAVQQNLALLGNQ---VRLF 56
DW L+ + G+I M +PR+ G A + +++ +L Q V+ +
Sbjct: 168 DWNILFNDKYKGQILMYYNPRDAFGVAQAYLNYSLNTTNEMELRETARILKEQKPLVQAY 227
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA-ASRLE 115
G+ + V ++ D L + ++ V+P+ GA+L+ D IP+ A +E
Sbjct: 228 VMDEIYDKMEAGEAALGVYYAGDSLSMIDNNPDLKFVIPEKGANLFVDAICIPSNAQNVE 287
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARAL----------PFNTRVKLPEELLKGKPSLDT 165
++ +I F + AL P N + + + +K P +
Sbjct: 288 AAEL-------------YINFLCEAEVALANIEYINYGSPNNAAINIMSDEVKNNPLI-- 332
Query: 166 KLIAGVPPAEILARCEFLEPLSEAT 190
PPAE+L CE L + T
Sbjct: 333 -----YPPAEVLDNCEVYITLPDET 352
>gi|126173349|ref|YP_001049498.1| extracellular solute-binding protein [Shewanella baltica OS155]
gi|386340106|ref|YP_006036472.1| extracellular solute-binding protein [Shewanella baltica OS117]
gi|418023188|ref|ZP_12662173.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS625]
gi|125996554|gb|ABN60629.1| extracellular solute-binding protein, family 1 [Shewanella baltica
OS155]
gi|334862507|gb|AEH12978.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS117]
gi|353537071|gb|EHC06628.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS625]
Length = 366
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S DV A R + + +PK GA+LW D+
Sbjct: 217 VTYFHSSRYISDLANGDICVAFGFSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDML 276
Query: 107 AIPAAS 112
AIPA S
Sbjct: 277 AIPADS 282
>gi|434381272|ref|YP_006703055.1| spermidine/putrescine transport ATP-binding protein PotD
[Brachyspira pilosicoli WesB]
gi|404429921|emb|CCG55967.1| spermidine/putrescine transport ATP-binding protein PotD
[Brachyspira pilosicoli WesB]
Length = 400
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 80/205 (39%), Gaps = 42/205 (20%)
Query: 8 DWKDLWLPELAGRISMVNSPREVIGTQAA--------AGRIAVQQNLALLGNQ---VRLF 56
DW L+ + G+I M +PR+ G A + +++ +L Q V+ +
Sbjct: 168 DWNILFNDKYKGQILMYYNPRDAFGVAQAYLNYSLNTTNEMELRETARILKEQKPLVQAY 227
Query: 57 DRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA-ASRLE 115
G+ I V ++ D L + ++ V+P+ GA+L+ D IP+ A +E
Sbjct: 228 VMDEIYDKMESGEAAIGVYYAGDSLSMIGNNPDLKFVIPEKGANLFVDAICIPSNAQNVE 287
Query: 116 TKQIGGRVRGPFPLIHQWIEFCLQTARAL----------PFNTRVKLPEELLKGKPSLDT 165
++ +I F + AL P N + + + +K P +
Sbjct: 288 AAEL-------------YINFLCEAEVALANIEYINYGSPNNAAINIMSDEVKNNPLI-- 332
Query: 166 KLIAGVPPAEILARCEFLEPLSEAT 190
PPAE+L CE L + T
Sbjct: 333 -----YPPAEVLDNCEVYITLPDET 352
>gi|300901217|ref|ZP_07119319.1| bacterial extracellular solute-binding protein [Escherichia coli MS
198-1]
gi|300939899|ref|ZP_07154534.1| bacterial extracellular solute-binding protein [Escherichia coli MS
21-1]
gi|331672393|ref|ZP_08373184.1| putrescine-binding periplasmic protein [Escherichia coli TA280]
gi|300355342|gb|EFJ71212.1| bacterial extracellular solute-binding protein [Escherichia coli MS
198-1]
gi|300455281|gb|EFK18774.1| bacterial extracellular solute-binding protein [Escherichia coli MS
21-1]
gi|331070588|gb|EGI41952.1| putrescine-binding periplasmic protein [Escherichia coli TA280]
Length = 395
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|422765428|ref|ZP_16819155.1| bacterial extracellular solute-binding protein [Escherichia coli
E1520]
gi|323937961|gb|EGB34223.1| bacterial extracellular solute-binding protein [Escherichia coli
E1520]
Length = 395
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|406939602|gb|EKD72586.1| hypothetical protein ACD_45C00633G0013 [uncultured bacterium]
Length = 351
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 11/117 (9%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-----------LALLGNQ 52
N W DLW + ++ +++ REV ++ + L L
Sbjct: 148 NSITKWSDLWDKKYENQLLLLDDSREVFAIALKILGYSINDSNPEHIKQAYLKLTELLPN 207
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
++LF + + D I + W+ D+ A K SN+ V PK G +W D +AIP
Sbjct: 208 IKLFKSDGAITILIDEDANIGMAWNGDLYKAQKENSNLTFVFPKDGFVMWVDNFAIP 264
>gi|424898361|ref|ZP_18321935.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393182588|gb|EJC82627.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 365
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 22/121 (18%)
Query: 12 LWLPELAGR-----ISMVNSPREVIGT-----------QAAAGRIAVQQNLALLGNQVRL 55
++ P++A + I ++++P++VI T A ++ L + +R
Sbjct: 159 IFDPKVAAKFKDCGIYVLDTPKDVITTAFRYLGLDPNSTKAEDFKKAEELLTAVRPNIRK 218
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 109
F + Y+ GD+ IA G+S D+L A R + V VP GA +W D+ AIP
Sbjct: 219 FHSSEYINALANGDICIAFGYSGDMLQARDRAAEAKNGVEVNYSVPPQGAQMWFDMMAIP 278
Query: 110 A 110
A
Sbjct: 279 A 279
>gi|387929101|ref|ZP_10131778.1| extracellular solute-binding protein family 1 [Bacillus
methanolicus PB1]
gi|387585919|gb|EIJ78243.1| extracellular solute-binding protein family 1 [Bacillus
methanolicus PB1]
Length = 357
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 79/214 (36%), Gaps = 48/214 (22%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQN-------------------LALL 49
W DLW P+ I +++ REV+G + ++ A++
Sbjct: 158 WNDLWDPDFKNEILLIDGAREVMGMGLNSLHYSLNDTNKSHLLEAKEKLDKLTPNIKAIV 217
Query: 50 GNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 109
G+++R+ + I V WS + N+ VVP+ G++LW D IP
Sbjct: 218 GDEIRMLMEN--------DEAAIGVVWSGTAAELMWEKDNLEYVVPEEGSNLWFDNMVIP 269
Query: 110 AASRLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSL 163
++ H++I F L Q + ++T K + + +
Sbjct: 270 KTAK------------NIEAAHKFINFMLDPKIAAQNTEYVGYSTPNKEALKYMDKEIVN 317
Query: 164 DTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
D + P E+ AR E E L + L+ Y L
Sbjct: 318 DKRF---YPDEEMTARLEVYENLGKKMLAYYNEL 348
>gi|350531160|ref|ZP_08910101.1| spermidine/putrescine transport system substrate-binding protein
[Vibrio rotiferianus DAT722]
Length = 343
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 42/206 (20%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWADLWKPELEGQVMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A N+ +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGMNLKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVP 172
+ H+ I+F L R ++ E++ S DT + V
Sbjct: 265 K------------NVEAAHKMIDFLL----------RPEIAEQI-----SADTGYLTAV- 296
Query: 173 PAEILARCEFLEPL--SEATLSDYEW 196
AE A+ + + PL S+ L EW
Sbjct: 297 -AESNAKFKDVAPLFPSQEDLDRVEW 321
>gi|331651869|ref|ZP_08352888.1| putrescine-binding periplasmic protein [Escherichia coli M718]
gi|331050147|gb|EGI22205.1| putrescine-binding periplasmic protein [Escherichia coli M718]
Length = 395
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|282892024|ref|ZP_06300501.1| hypothetical protein pah_c205o044 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498066|gb|EFB40408.1| hypothetical protein pah_c205o044 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 343
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 80/211 (37%), Gaps = 54/211 (25%)
Query: 9 WKDLWLPELAGRISMVNSPREVIGT------------------QAAAGRIAVQQNLALLG 50
W+ +L GR++M+N RE +G QAA+ I ++NLA
Sbjct: 146 WEIFARRDLKGRMTMLNDVREALGAALKSLGYSLNSTDDFQIAQAASTLINWKRNLAK-- 203
Query: 51 NQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 110
FD Y + + G+S D++ ++ +N+ ++ P+ G ++ D IP
Sbjct: 204 -----FDSEQYKNGIASAEYLVVQGYSGDLIQVMQEDANIGILYPQEGTAISIDEIIIPK 258
Query: 111 ASRLETKQIGGRVRGPFPLIHQWIEFCLQTARAL----------PFNTRVKLPEELLKGK 160
+ L H +I F L+ RA P + ++
Sbjct: 259 HA------------PEVQLAHAFINFLLEPKRAAENMEFVFFISPNTAAAQYLSPKVRNN 306
Query: 161 PSLDTKLIAGVPPAEILARCEFLEPLSEATL 191
P+L+ P EIL R E + LSE +
Sbjct: 307 PALNL-------PNEILQRSEVIHDLSENNI 330
>gi|398844426|ref|ZP_10601490.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398254512|gb|EJN39605.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 362
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 12/114 (10%)
Query: 5 GFKDWKDLWLPELAGRISMVNSPREVIGTQAAAGRIAVQQNLALLGNQVRLFDRTHYLKV 64
F D D P + + M +PR ++ A + L L V F + Y+
Sbjct: 171 AFMDSPDELFPAMLNYLGM--NPR----SENLADYAKAEARLMELRPSVTYFHSSKYISD 224
Query: 65 FGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 112
G++ +A G+S DV A R +A +PK GA++W DL A+P S
Sbjct: 225 LANGNICVAFGYSGDVFQAASRAQEAKNGVKIAYSIPKEGANIWFDLLAVPKDS 278
>gi|420390323|ref|ZP_14889591.1| potF [Escherichia coli EPEC C342-62]
gi|391314647|gb|EIQ72197.1| potF [Escherichia coli EPEC C342-62]
Length = 353
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 203 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 262
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 263 FAMPADAK 270
>gi|417737718|ref|ZP_12386319.1| putrescine-binding periplasmic protein [Shigella flexneri 4343-70]
gi|332759765|gb|EGJ90068.1| putrescine-binding periplasmic protein [Shigella flexneri 4343-70]
Length = 353
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T A +L L L +R F + Y+ G
Sbjct: 160 VSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANG 219
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 220 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|300902387|ref|ZP_07120370.1| bacterial extracellular solute-binding protein [Escherichia coli MS
84-1]
gi|301305374|ref|ZP_07211469.1| bacterial extracellular solute-binding protein [Escherichia coli MS
124-1]
gi|415860860|ref|ZP_11534575.1| bacterial extracellular solute-binding protein [Escherichia coli MS
85-1]
gi|300405534|gb|EFJ89072.1| bacterial extracellular solute-binding protein [Escherichia coli MS
84-1]
gi|300839392|gb|EFK67152.1| bacterial extracellular solute-binding protein [Escherichia coli MS
124-1]
gi|315257890|gb|EFU37858.1| bacterial extracellular solute-binding protein [Escherichia coli MS
85-1]
Length = 395
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|153837764|ref|ZP_01990431.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, partial [Vibrio
parahaemolyticus AQ3810]
gi|149748869|gb|EDM59704.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ3810]
Length = 331
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 133 NDFQSWADLWKPELEGQVMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPN 192
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A N+ +V PK G W D +AI + +
Sbjct: 193 VLVFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGLNLKLVFPKEGGIGWVDNFAISSGA 252
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T V K L
Sbjct: 253 K------------NVEAAHKMIDFLLRPEIAEQISRDTGYLTAVTESNSKFKDVAPL--- 297
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + + T+ ++ +
Sbjct: 298 ----FPSQEDLDRVEWQDSVGDMTVKYEDYFL 325
>gi|429108125|ref|ZP_19169994.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 681]
gi|426294848|emb|CCJ96107.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 681]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R N++ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|300947056|ref|ZP_07161277.1| bacterial extracellular solute-binding protein [Escherichia coli MS
116-1]
gi|300957057|ref|ZP_07169303.1| bacterial extracellular solute-binding protein [Escherichia coli MS
175-1]
gi|422770088|ref|ZP_16823779.1| extracellular solute-binding protein [Escherichia coli E482]
gi|300316197|gb|EFJ65981.1| bacterial extracellular solute-binding protein [Escherichia coli MS
175-1]
gi|300453295|gb|EFK16915.1| bacterial extracellular solute-binding protein [Escherichia coli MS
116-1]
gi|323942771|gb|EGB38936.1| extracellular solute-binding protein [Escherichia coli E482]
Length = 415
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 265 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 324
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 325 FAMPADAK 332
>gi|218514463|ref|ZP_03511303.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Rhizobium etli 8C-3]
Length = 304
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 17/110 (15%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLALLGNQVRLFDRTHYLKVFGIGD 69
I ++++P++V+ T A V++ L + +R F + Y+ GD
Sbjct: 112 IYVLDTPKDVMTTALKYLGLDPNSTKAEDFKKVEELLTAVRPYIRKFHSSEYINALANGD 171
Query: 70 VWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
+ IA G+S D+L A R + V +P GA +W D+ AIPA ++
Sbjct: 172 ICIAFGYSGDMLQARDRAAEAKNGVEVNYSIPVQGAQMWFDMMAIPADAK 221
>gi|373948568|ref|ZP_09608529.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS183]
gi|386325590|ref|YP_006021707.1| extracellular solute-binding protein [Shewanella baltica BA175]
gi|333819735|gb|AEG12401.1| extracellular solute-binding protein family 1 [Shewanella baltica
BA175]
gi|373885168|gb|EHQ14060.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS183]
Length = 366
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S DV A R + + +PK GA+LW D+
Sbjct: 217 VTYFHSSRYISDLANGDICVAFGFSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDML 276
Query: 107 AIPAAS 112
AIPA S
Sbjct: 277 AIPADS 282
>gi|300823995|ref|ZP_07104117.1| bacterial extracellular solute-binding protein [Escherichia coli MS
119-7]
gi|300921116|ref|ZP_07137500.1| bacterial extracellular solute-binding protein [Escherichia coli MS
115-1]
gi|301646291|ref|ZP_07246182.1| bacterial extracellular solute-binding protein [Escherichia coli MS
146-1]
gi|331641375|ref|ZP_08342510.1| putrescine-binding periplasmic protein [Escherichia coli H736]
gi|331676642|ref|ZP_08377338.1| putrescine-binding periplasmic protein [Escherichia coli H591]
gi|422793872|ref|ZP_16846565.1| extracellular solute-binding protein [Escherichia coli TA007]
gi|300411967|gb|EFJ95277.1| bacterial extracellular solute-binding protein [Escherichia coli MS
115-1]
gi|300523506|gb|EFK44575.1| bacterial extracellular solute-binding protein [Escherichia coli MS
119-7]
gi|301075494|gb|EFK90300.1| bacterial extracellular solute-binding protein [Escherichia coli MS
146-1]
gi|323969582|gb|EGB64870.1| extracellular solute-binding protein [Escherichia coli TA007]
gi|331038173|gb|EGI10393.1| putrescine-binding periplasmic protein [Escherichia coli H736]
gi|331075331|gb|EGI46629.1| putrescine-binding periplasmic protein [Escherichia coli H591]
Length = 395
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|301020628|ref|ZP_07184703.1| bacterial extracellular solute-binding protein [Escherichia coli MS
69-1]
gi|300398604|gb|EFJ82142.1| bacterial extracellular solute-binding protein [Escherichia coli MS
69-1]
Length = 395
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|419146898|ref|ZP_13691589.1| potF [Escherichia coli DEC6B]
gi|378000417|gb|EHV63488.1| potF [Escherichia coli DEC6B]
Length = 353
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T A +L L L +R F + Y+ G
Sbjct: 160 VSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANG 219
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 220 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|308178366|ref|YP_003917772.1| polyamine ABC transporter substrate-binding protein [Arthrobacter
arilaitensis Re117]
gi|307745829|emb|CBT76801.1| polyamine ABC transporter, substrate-binding protein [Arthrobacter
arilaitensis Re117]
Length = 409
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 19/130 (14%)
Query: 5 GFKDWKDLWLPELAGRISMVNSPREVIG----------------TQAAAGRIAVQQNLAL 48
G K +DLW P L GRI++++ R+ IG + A +++N+
Sbjct: 201 GMKSVEDLWDPSLKGRITVLDEMRDTIGLLMMQNGVDIAGDWGENEFGAATDLLRKNID- 259
Query: 49 LGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLP-AVKRMSNVAVVVPKSGASLWADLWA 107
Q+R Y + F GD + WS D++ + ++P++G +LW+D
Sbjct: 260 -NGQIRQVKGNSYKQDFISGDAIAGIVWSGDIVQMNFENDDQWEFIIPEAGGTLWSDNMM 318
Query: 108 IPAASRLETK 117
+P S +T
Sbjct: 319 VPVGSPRKTN 328
>gi|300924463|ref|ZP_07140433.1| bacterial extracellular solute-binding protein [Escherichia coli MS
182-1]
gi|301325862|ref|ZP_07219295.1| bacterial extracellular solute-binding protein [Escherichia coli MS
78-1]
gi|300419348|gb|EFK02659.1| bacterial extracellular solute-binding protein [Escherichia coli MS
182-1]
gi|300847376|gb|EFK75136.1| bacterial extracellular solute-binding protein [Escherichia coli MS
78-1]
Length = 395
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|254474316|ref|ZP_05087705.1| ABC transporter, polyamine transport protein, periplasmic protein
[Pseudovibrio sp. JE062]
gi|211956591|gb|EEA91802.1| ABC transporter, polyamine transport protein, periplasmic protein
[Pseudovibrio sp. JE062]
Length = 363
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
+R F + ++ GD+ +A GWS DVL A R + V ++P GA +W D
Sbjct: 214 IRKFHNSEFVNGLANGDICLAYGWSGDVLQAADRAAEADKGVEVTYILPNEGAQMWFDQI 273
Query: 107 AIPAASR 113
AIPA +
Sbjct: 274 AIPADAE 280
>gi|381182867|ref|ZP_09891648.1| extracellular solute-binding protein family 1 [Listeriaceae
bacterium TTU M1-001]
gi|380317249|gb|EIA20587.1| extracellular solute-binding protein family 1 [Listeriaceae
bacterium TTU M1-001]
Length = 357
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 48/220 (21%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIG--------TQAAAGRIAVQQNL-------- 46
+ F W LW +L +I +++ REV+G + +++ L
Sbjct: 152 DKNFDHWDSLWDKDLENQILLIDGAREVMGLGLNSLGYSLNDTNEKHLEEALLKLKKMTP 211
Query: 47 ---ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
A++G++++L + + +AV +S + + +++ V+PK G++LW
Sbjct: 212 NVKAIVGDEIKL--------LMADNEAGVAVTFSGEASEMLSENADLDYVIPKEGSNLWF 263
Query: 104 DLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQ------TARALPFNTRVKLPEELL 157
D IP ++ V G HQ+I F L+ A + + T K +LL
Sbjct: 264 DNMVIPKTAK--------NVDGA----HQFINFMLKPENAAINAEYVGYATPNKAAIKLL 311
Query: 158 KGKPSLDTKLIAGVPPAEILARCEFLEPLSEATLSDYEWL 197
+ S D + P L E + L + LS Y L
Sbjct: 312 PKEISQDKRF---YPDMNELDNLEVYDNLGKRMLSHYNEL 348
>gi|300817047|ref|ZP_07097266.1| bacterial extracellular solute-binding protein [Escherichia coli MS
107-1]
gi|332282252|ref|ZP_08394665.1| putrescine-binding periplasmic protein [Shigella sp. D9]
gi|415880496|ref|ZP_11545169.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli MS 79-10]
gi|300530399|gb|EFK51461.1| bacterial extracellular solute-binding protein [Escherichia coli MS
107-1]
gi|332104604|gb|EGJ07950.1| putrescine-binding periplasmic protein [Shigella sp. D9]
gi|342926405|gb|EGU95127.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli MS 79-10]
Length = 395
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|452970892|ref|ZP_21969119.1| putrescine/spermidine ABC transporter substrate-binding protein
[Escherichia coli O157:H7 str. EC4009]
Length = 353
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 203 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 262
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 263 FAMPADAK 270
>gi|417209667|ref|ZP_12020951.1| putrescine-binding periplasmic protein [Escherichia coli JB1-95]
gi|419202092|ref|ZP_13745314.1| potF [Escherichia coli DEC8B]
gi|378055736|gb|EHW17997.1| potF [Escherichia coli DEC8B]
gi|386196292|gb|EIH90518.1| putrescine-binding periplasmic protein [Escherichia coli JB1-95]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|309795351|ref|ZP_07689769.1| bacterial extracellular solute-binding protein [Escherichia coli MS
145-7]
gi|308121001|gb|EFO58263.1| bacterial extracellular solute-binding protein [Escherichia coli MS
145-7]
Length = 395
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|217974349|ref|YP_002359100.1| family 1 extracellular solute-binding protein [Shewanella baltica
OS223]
gi|217499484|gb|ACK47677.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS223]
Length = 366
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S DV A R + + +PK GA+LW D+
Sbjct: 217 VTYFHSSRYISDLANGDICVAFGFSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDML 276
Query: 107 AIPAAS 112
AIPA S
Sbjct: 277 AIPADS 282
>gi|152999700|ref|YP_001365381.1| extracellular solute-binding protein [Shewanella baltica OS185]
gi|151364318|gb|ABS07318.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS185]
Length = 366
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S DV A R + + +PK GA+LW D+
Sbjct: 217 VTYFHSSRYISDLANGDICVAFGFSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDML 276
Query: 107 AIPAAS 112
AIPA S
Sbjct: 277 AIPADS 282
>gi|397167724|ref|ZP_10491164.1| putrescine-binding periplasmic protein [Enterobacter radicincitans
DSM 16656]
gi|396090542|gb|EJI88112.1| putrescine-binding periplasmic protein [Enterobacter radicincitans
DSM 16656]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVTYTIPKEGALAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|13194613|gb|AAK15488.1|AF323694_3 PotF2 [Pseudomonas fluorescens]
Length = 365
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 106
V F+ + Y+ G++ +A G+S D+ A R S +A V+PK G +LW D+
Sbjct: 216 VTYFNSSKYISDLANGEICVAAGFSGDIFQAAARASEAGKGVEIAYVIPKEGGNLWFDML 275
Query: 107 AIP 109
AIP
Sbjct: 276 AIP 278
>gi|423139332|ref|ZP_17126970.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379051886|gb|EHY69777.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 371
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD +A+GW+ DV A R N+A +PK GA + D+
Sbjct: 221 NIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNIAFSIPKEGAMAFFDV 280
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 281 FAMPADAK 288
>gi|417742354|ref|ZP_12390904.1| potF [Shigella flexneri 2930-71]
gi|417826927|ref|ZP_12473500.1| potF [Shigella flexneri J1713]
gi|332768025|gb|EGJ98211.1| potF [Shigella flexneri 2930-71]
gi|335576695|gb|EGM62940.1| potF [Shigella flexneri J1713]
Length = 353
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 21 ISMVNSPREVIGT-----------QAAAGRIAVQQNLAL-LGNQVRLFDRTHYLKVFGIG 68
+S +++P EV T A +L L L +R F + Y+ G
Sbjct: 160 VSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANG 219
Query: 69 DVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 113
D+ +A+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 220 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|300929337|ref|ZP_07144810.1| bacterial extracellular solute-binding protein [Escherichia coli MS
187-1]
gi|422785446|ref|ZP_16838185.1| extracellular solute-binding protein [Escherichia coli H489]
gi|300462683|gb|EFK26176.1| bacterial extracellular solute-binding protein [Escherichia coli MS
187-1]
gi|323962967|gb|EGB58539.1| extracellular solute-binding protein [Escherichia coli H489]
Length = 395
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|291281853|ref|YP_003498671.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O55:H7 str. CB9615]
gi|290761726|gb|ADD55687.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O55:H7 str. CB9615]
Length = 420
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 270 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 329
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 330 FAMPADAK 337
>gi|429330947|ref|ZP_19211721.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas putida CSV86]
gi|428764274|gb|EKX86415.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas putida CSV86]
Length = 364
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A G+S DV A R +VA V+PK G +LW D+
Sbjct: 215 VTYFHSSKYISDLANGDICVAAGFSGDVFQAKARAEEAGKGVDVAYVIPKEGGNLWFDML 274
Query: 107 AIP 109
AIP
Sbjct: 275 AIP 277
>gi|398839011|ref|ZP_10596261.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398113641|gb|EJM03485.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 365
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V F + Y+ GD+ +A+G+S D+ A R + N+A +PK G +LW D+
Sbjct: 216 VTYFHSSKYIADLANGDICVAIGFSGDMFQAKARAAEAGKGMNIAYSIPKEGGALWFDML 275
Query: 107 AIPAAS 112
AIP S
Sbjct: 276 AIPKDS 281
>gi|384542392|ref|YP_005726454.1| Putrescine-binding periplasmic protein [Shigella flexneri 2002017]
gi|281600177|gb|ADA73161.1| Putrescine-binding periplasmic protein [Shigella flexneri 2002017]
Length = 395
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|110804852|ref|YP_688372.1| spermidine/putrescine ABC transporter substrate-binding protein
[Shigella flexneri 5 str. 8401]
gi|424837314|ref|ZP_18261951.1| putrescine ABC transporter periplasmic-binding protein [Shigella
flexneri 5a str. M90T]
gi|110614400|gb|ABF03067.1| Putrescine-binding periplasmic protein precursor [Shigella flexneri
5 str. 8401]
gi|383466366|gb|EID61387.1| putrescine ABC transporter periplasmic-binding protein [Shigella
flexneri 5a str. M90T]
Length = 395
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 245 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 304
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 305 FAMPADAK 312
>gi|28898300|ref|NP_797905.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|308094668|ref|ZP_05890992.2| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AN-5034]
gi|308095547|ref|ZP_05906703.2| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus Peru-466]
gi|308125372|ref|ZP_05774859.2| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus K5030]
gi|433657709|ref|YP_007275088.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio parahaemolyticus BB22OP]
gi|28806517|dbj|BAC59789.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|308089128|gb|EFO38823.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus Peru-466]
gi|308091194|gb|EFO40889.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AN-5034]
gi|308111406|gb|EFO48946.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus K5030]
gi|432508397|gb|AGB09914.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio parahaemolyticus BB22OP]
Length = 355
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 36/212 (16%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 157 NDFQSWADLWKPELEGQVMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPN 216
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A N+ +V PK G W D +AI + +
Sbjct: 217 VLVFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGLNLKLVFPKEGGIGWVDNFAISSGA 276
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCL------QTARALPFNTRVKLPEELLKGKPSLDTK 166
+ H+ I+F L Q +R + T V K L
Sbjct: 277 K------------NVEAAHKMIDFLLRPEIAEQISRDTGYLTAVTESNSKFKDVAPL--- 321
Query: 167 LIAGVPPAEILARCEFLEPLSEATLSDYEWLV 198
P E L R E+ + + + T+ ++ +
Sbjct: 322 ----FPSQEDLDRVEWQDSVGDMTVKYEDYFL 349
>gi|424032353|ref|ZP_17771772.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HENC-01]
gi|408876046|gb|EKM15181.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HENC-01]
Length = 343
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 42/206 (20%)
Query: 4 NGFKDWKDLWLPELAGRISMVNSPREVI----------GTQAAAGRI-AVQQNLALLGNQ 52
N F+ W DLW PEL G++ +++ REV G +I L L
Sbjct: 145 NDFQSWADLWKPELEGQVMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPN 204
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 112
V +F+ + + G+V + + W+ A N+ +V PK G W D +AI + +
Sbjct: 205 VLVFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGMNLKLVFPKEGGIGWVDNFAISSGA 264
Query: 113 RLETKQIGGRVRGPFPLIHQWIEFCLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGVP 172
+ H+ I+F L R ++ E++ S DT + V
Sbjct: 265 K------------NVEAAHKMIDFLL----------RPEIAEQI-----SADTGYLTAV- 296
Query: 173 PAEILARCEFLEPL--SEATLSDYEW 196
AE A+ + + PL S+ L EW
Sbjct: 297 -AESNAKFKDVAPLFPSQDDLDRVEW 321
>gi|366159061|ref|ZP_09458923.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia sp. TW09308]
gi|432371595|ref|ZP_19614648.1| putrescine-binding periplasmic protein [Escherichia coli KTE11]
gi|430899033|gb|ELC21139.1| putrescine-binding periplasmic protein [Escherichia coli KTE11]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|301027634|ref|ZP_07190954.1| bacterial extracellular solute-binding protein [Escherichia coli MS
196-1]
gi|299879236|gb|EFI87447.1| bacterial extracellular solute-binding protein [Escherichia coli MS
196-1]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|417665994|ref|ZP_12315556.1| putrescine-binding periplasmic protein [Escherichia coli STEC_O31]
gi|397786545|gb|EJK97381.1| putrescine-binding periplasmic protein [Escherichia coli STEC_O31]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|420380950|ref|ZP_14880405.1| putrescine-binding periplasmic protein [Shigella dysenteriae
225-75]
gi|391300985|gb|EIQ58888.1| putrescine-binding periplasmic protein [Shigella dysenteriae
225-75]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|260867027|ref|YP_003233429.1| putrescine transporter subunit PotF [Escherichia coli O111:H- str.
11128]
gi|415824741|ref|ZP_11512975.1| putrescine-binding periplasmic protein [Escherichia coli OK1180]
gi|417192859|ref|ZP_12014706.1| putrescine-binding periplasmic protein [Escherichia coli 4.0522]
gi|417590576|ref|ZP_12241291.1| putrescine-binding periplasmic protein [Escherichia coli 2534-86]
gi|419195972|ref|ZP_13739376.1| putrescine-binding periplasmic protein [Escherichia coli DEC8A]
gi|419891682|ref|ZP_14411727.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9570]
gi|419894607|ref|ZP_14414503.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9574]
gi|420088758|ref|ZP_14600618.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9602]
gi|420098068|ref|ZP_14609349.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9634]
gi|424769414|ref|ZP_18196641.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str.
CFSAN001632]
gi|257763383|dbj|BAI34878.1| putrescine transporter subunit PotF [Escherichia coli O111:H- str.
11128]
gi|323175524|gb|EFZ61119.1| putrescine-binding periplasmic protein [Escherichia coli OK1180]
gi|345344522|gb|EGW76889.1| putrescine-binding periplasmic protein [Escherichia coli 2534-86]
gi|378051780|gb|EHW14095.1| putrescine-binding periplasmic protein [Escherichia coli DEC8A]
gi|386190040|gb|EIH78788.1| putrescine-binding periplasmic protein [Escherichia coli 4.0522]
gi|388349030|gb|EIL14580.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9570]
gi|388363444|gb|EIL27373.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9574]
gi|394382247|gb|EJE59894.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9634]
gi|394389548|gb|EJE66690.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9602]
gi|421944063|gb|EKU01325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|146311026|ref|YP_001176100.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter sp. 638]
gi|145317902|gb|ABP60049.1| extracellular solute-binding protein, family 1 [Enterobacter sp.
638]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVTYTIPKEGALAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|85706011|ref|ZP_01037107.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Roseovarius sp. 217]
gi|85669599|gb|EAQ24464.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Roseovarius sp. 217]
Length = 362
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
++ F+ + Y+ GD+ +AVGWS D+L A R + + PK GA +W D
Sbjct: 213 IQKFNSSEYINALANGDICVAVGWSGDILQARDRAAEADNGVEIVYNAPKEGAQMWFDQM 272
Query: 107 AIP 109
AIP
Sbjct: 273 AIP 275
>gi|193064481|ref|ZP_03045562.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E22]
gi|260843105|ref|YP_003220883.1| putrescine transporter subunit PotF [Escherichia coli O103:H2 str.
12009]
gi|417177493|ref|ZP_12006974.1| putrescine-binding periplasmic protein [Escherichia coli 3.2608]
gi|417180250|ref|ZP_12007958.1| putrescine-binding periplasmic protein [Escherichia coli 93.0624]
gi|192928943|gb|EDV82556.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E22]
gi|257758252|dbj|BAI29749.1| putrescine transporter subunit PotF [Escherichia coli O103:H2 str.
12009]
gi|386176042|gb|EIH53524.1| putrescine-binding periplasmic protein [Escherichia coli 3.2608]
gi|386185605|gb|EIH68331.1| putrescine-binding periplasmic protein [Escherichia coli 93.0624]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|432579551|ref|ZP_19815982.1| putrescine-binding periplasmic protein [Escherichia coli KTE56]
gi|431107541|gb|ELE11706.1| putrescine-binding periplasmic protein [Escherichia coli KTE56]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|425421448|ref|ZP_18802655.1| putrescine-binding periplasmic protein [Escherichia coli 0.1288]
gi|408347112|gb|EKJ61346.1| putrescine-binding periplasmic protein [Escherichia coli 0.1288]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|417230223|ref|ZP_12031809.1| putrescine-binding periplasmic protein [Escherichia coli 5.0959]
gi|386206713|gb|EII11219.1| putrescine-binding periplasmic protein [Escherichia coli 5.0959]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|260854146|ref|YP_003228037.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. 11368]
gi|415785124|ref|ZP_11492761.1| putrescine-binding periplasmic protein [Escherichia coli EPECa14]
gi|417295212|ref|ZP_12082468.1| putrescine-binding periplasmic protein [Escherichia coli 900105
(10e)]
gi|419208005|ref|ZP_13751128.1| potF [Escherichia coli DEC8C]
gi|419214551|ref|ZP_13757573.1| potF [Escherichia coli DEC8D]
gi|419220151|ref|ZP_13763103.1| potF [Escherichia coli DEC8E]
gi|419225642|ref|ZP_13768525.1| potF [Escherichia coli DEC9A]
gi|419231629|ref|ZP_13774417.1| potF [Escherichia coli DEC9B]
gi|419236828|ref|ZP_13779571.1| potF [Escherichia coli DEC9C]
gi|419242358|ref|ZP_13785005.1| potF [Escherichia coli DEC9D]
gi|419247875|ref|ZP_13790482.1| potF [Escherichia coli DEC9E]
gi|419253613|ref|ZP_13796152.1| potF [Escherichia coli DEC10A]
gi|419259675|ref|ZP_13802119.1| potF [Escherichia coli DEC10B]
gi|419265753|ref|ZP_13808134.1| potF [Escherichia coli DEC10C]
gi|419271357|ref|ZP_13813681.1| potF [Escherichia coli DEC10D]
gi|419282843|ref|ZP_13825054.1| potF [Escherichia coli DEC10F]
gi|419874556|ref|ZP_14396479.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9534]
gi|419885475|ref|ZP_14406218.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9545]
gi|419902683|ref|ZP_14421875.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9942]
gi|419909554|ref|ZP_14428111.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. CVM10026]
gi|420105546|ref|ZP_14616016.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9455]
gi|420111561|ref|ZP_14621389.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9553]
gi|420117654|ref|ZP_14627009.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10021]
gi|420124077|ref|ZP_14632947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10030]
gi|420129649|ref|ZP_14638175.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10224]
gi|420133082|ref|ZP_14641352.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9952]
gi|424747221|ref|ZP_18175418.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424755887|ref|ZP_18183731.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425377764|ref|ZP_18762130.1| putrescine-binding periplasmic protein [Escherichia coli EC1865]
gi|257752795|dbj|BAI24297.1| putrescine transporter subunit PotF [Escherichia coli O26:H11 str.
11368]
gi|323155772|gb|EFZ41941.1| putrescine-binding periplasmic protein [Escherichia coli EPECa14]
gi|378061179|gb|EHW23365.1| potF [Escherichia coli DEC8C]
gi|378066804|gb|EHW28932.1| potF [Escherichia coli DEC8D]
gi|378071385|gb|EHW33455.1| potF [Escherichia coli DEC8E]
gi|378080011|gb|EHW41977.1| potF [Escherichia coli DEC9A]
gi|378081347|gb|EHW43302.1| potF [Escherichia coli DEC9B]
gi|378087691|gb|EHW49547.1| potF [Escherichia coli DEC9C]
gi|378093709|gb|EHW55513.1| potF [Escherichia coli DEC9D]
gi|378100040|gb|EHW61737.1| potF [Escherichia coli DEC9E]
gi|378105153|gb|EHW66800.1| potF [Escherichia coli DEC10A]
gi|378114455|gb|EHW76011.1| potF [Escherichia coli DEC10B]
gi|378117332|gb|EHW78848.1| potF [Escherichia coli DEC10C]
gi|378120888|gb|EHW82350.1| potF [Escherichia coli DEC10D]
gi|378138045|gb|EHW99306.1| potF [Escherichia coli DEC10F]
gi|386261575|gb|EIJ17040.1| putrescine-binding periplasmic protein [Escherichia coli 900105
(10e)]
gi|388349802|gb|EIL15254.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9545]
gi|388350747|gb|EIL16075.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9534]
gi|388372924|gb|EIL36301.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. CVM10026]
gi|388373469|gb|EIL36739.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9942]
gi|394381956|gb|EJE59609.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10224]
gi|394395831|gb|EJE72224.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9455]
gi|394398150|gb|EJE74350.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9553]
gi|394401884|gb|EJE77653.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10021]
gi|394415718|gb|EJE89562.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10030]
gi|394426734|gb|EJE99527.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9952]
gi|408308734|gb|EKJ25967.1| putrescine-binding periplasmic protein [Escherichia coli EC1865]
gi|421946651|gb|EKU03767.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421949939|gb|EKU06844.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str.
CFSAN001630]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|194428217|ref|ZP_03060760.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B171]
gi|415803209|ref|ZP_11500357.1| putrescine-binding periplasmic protein [Escherichia coli E128010]
gi|417622217|ref|ZP_12272541.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_H.1.8]
gi|419310481|ref|ZP_13852352.1| putrescine-binding periplasmic protein [Escherichia coli DEC11E]
gi|419315769|ref|ZP_13857593.1| putrescine-binding periplasmic protein [Escherichia coli DEC12A]
gi|419321715|ref|ZP_13863447.1| potF [Escherichia coli DEC12B]
gi|419327845|ref|ZP_13869473.1| putrescine-binding periplasmic protein [Escherichia coli DEC12C]
gi|419333369|ref|ZP_13874924.1| potF [Escherichia coli DEC12D]
gi|419338686|ref|ZP_13880171.1| potF [Escherichia coli DEC12E]
gi|194413777|gb|EDX30056.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B171]
gi|323159676|gb|EFZ45655.1| putrescine-binding periplasmic protein [Escherichia coli E128010]
gi|345385041|gb|EGX14891.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_H.1.8]
gi|378160196|gb|EHX21193.1| putrescine-binding periplasmic protein [Escherichia coli DEC11E]
gi|378173150|gb|EHX33994.1| potF [Escherichia coli DEC12B]
gi|378173861|gb|EHX34694.1| putrescine-binding periplasmic protein [Escherichia coli DEC12A]
gi|378175304|gb|EHX36122.1| putrescine-binding periplasmic protein [Escherichia coli DEC12C]
gi|378188605|gb|EHX49201.1| potF [Escherichia coli DEC12D]
gi|378193209|gb|EHX53750.1| potF [Escherichia coli DEC12E]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|82750711|ref|YP_416452.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus RF122]
gi|82656242|emb|CAI80656.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus RF122]
Length = 357
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F WK L+ P+ +I +V+ RE+IG + + +++L L QVR
Sbjct: 155 FDSWKSLYNPKFKNQILLVDGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVR 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + IAV WS P V+ V+PK G++LW D IP ++
Sbjct: 215 GVVGDEITMMLQQNEGNIAVVWSGVAAPLVQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|424888563|ref|ZP_18312166.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393174112|gb|EJC74156.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 365
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 22/121 (18%)
Query: 12 LWLPELAGR-----ISMVNSPREVIGT-----------QAAAGRIAVQQNLALLGNQVRL 55
++ P++A + I ++++P++VI T A ++ L + +R
Sbjct: 159 IFDPKVAAKFKDCGIYVLDTPKDVITTAFRYLGLDPNSTKAEDFKKAEELLTAVRPNIRK 218
Query: 56 FDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 109
F + Y+ GD+ IA G+S D+L A R + V VP GA +W D+ AIP
Sbjct: 219 FHSSEYINALANGDICIAFGYSGDMLQARDRAAEAKNGVEVNYSVPPQGAQMWFDMMAIP 278
Query: 110 A 110
A
Sbjct: 279 A 279
>gi|419917933|ref|ZP_14436152.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD2]
gi|432792074|ref|ZP_20026164.1| putrescine-binding periplasmic protein [Escherichia coli KTE78]
gi|432798037|ref|ZP_20032062.1| putrescine-binding periplasmic protein [Escherichia coli KTE79]
gi|388392734|gb|EIL54143.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD2]
gi|431341656|gb|ELG28662.1| putrescine-binding periplasmic protein [Escherichia coli KTE78]
gi|431345059|gb|ELG31991.1| putrescine-binding periplasmic protein [Escherichia coli KTE79]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|417638181|ref|ZP_12288347.1| putrescine-binding periplasmic protein [Escherichia coli TX1999]
gi|419168841|ref|ZP_13713235.1| putrescine-binding periplasmic protein [Escherichia coli DEC7A]
gi|419179821|ref|ZP_13723444.1| potF [Escherichia coli DEC7C]
gi|419185382|ref|ZP_13728904.1| potF [Escherichia coli DEC7D]
gi|419190576|ref|ZP_13734043.1| putrescine-binding periplasmic protein [Escherichia coli DEC7E]
gi|419864881|ref|ZP_14387276.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H25 str. CVM9340]
gi|420384482|ref|ZP_14883866.1| putrescine-binding periplasmic protein [Escherichia coli EPECa12]
gi|427803967|ref|ZP_18971034.1| periplasmic putrescine-binding protein [Escherichia coli chi7122]
gi|427808553|ref|ZP_18975618.1| periplasmic putrescine-binding protein; permease protein
[Escherichia coli]
gi|433129206|ref|ZP_20314674.1| putrescine-binding periplasmic protein [Escherichia coli KTE163]
gi|433134030|ref|ZP_20319403.1| putrescine-binding periplasmic protein [Escherichia coli KTE166]
gi|443616928|ref|YP_007380784.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli APEC O78]
gi|345395035|gb|EGX24788.1| putrescine-binding periplasmic protein [Escherichia coli TX1999]
gi|378018059|gb|EHV80926.1| putrescine-binding periplasmic protein [Escherichia coli DEC7A]
gi|378027006|gb|EHV89638.1| potF [Escherichia coli DEC7C]
gi|378032800|gb|EHV95381.1| potF [Escherichia coli DEC7D]
gi|378041813|gb|EHW04271.1| putrescine-binding periplasmic protein [Escherichia coli DEC7E]
gi|388338572|gb|EIL05020.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H25 str. CVM9340]
gi|391308840|gb|EIQ66527.1| putrescine-binding periplasmic protein [Escherichia coli EPECa12]
gi|412962149|emb|CCK46063.1| periplasmic putrescine-binding protein [Escherichia coli chi7122]
gi|412968732|emb|CCJ43357.1| periplasmic putrescine-binding protein; permease protein
[Escherichia coli]
gi|431650784|gb|ELJ18095.1| putrescine-binding periplasmic protein [Escherichia coli KTE163]
gi|431661316|gb|ELJ28130.1| putrescine-binding periplasmic protein [Escherichia coli KTE166]
gi|443421436|gb|AGC86340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli APEC O78]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|422806126|ref|ZP_16854558.1| extracellular solute-binding protein [Escherichia fergusonii B253]
gi|324112664|gb|EGC06640.1| extracellular solute-binding protein [Escherichia fergusonii B253]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|148254930|ref|YP_001239515.1| putrescine ABC transporter periplasmic binding protein
[Bradyrhizobium sp. BTAi1]
gi|146407103|gb|ABQ35609.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. BTAi1]
Length = 368
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
VR F + YL G++ + VGWS D++ A R + +PK GA ++ D
Sbjct: 218 SVRKFHSSEYLSALATGEICLVVGWSGDIMQARSRAEEAKNGIEIGYAIPKEGAQMFFDN 277
Query: 106 WAIPAASRLETK 117
+AIPA ++ T+
Sbjct: 278 FAIPADAQHVTE 289
>gi|387611396|ref|YP_006114512.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli ETEC H10407]
gi|404374179|ref|ZP_10979398.1| putrescine-binding periplasmic protein [Escherichia sp. 1_1_43]
gi|432368912|ref|ZP_19612013.1| putrescine-binding periplasmic protein [Escherichia coli KTE10]
gi|432484548|ref|ZP_19726468.1| putrescine-binding periplasmic protein [Escherichia coli KTE212]
gi|432669800|ref|ZP_19905340.1| putrescine-binding periplasmic protein [Escherichia coli KTE119]
gi|432880589|ref|ZP_20097124.1| putrescine-binding periplasmic protein [Escherichia coli KTE154]
gi|433172684|ref|ZP_20357237.1| putrescine-binding periplasmic protein [Escherichia coli KTE232]
gi|309701132|emb|CBJ00430.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli ETEC H10407]
gi|404292237|gb|EJZ49066.1| putrescine-binding periplasmic protein [Escherichia sp. 1_1_43]
gi|430888124|gb|ELC10847.1| putrescine-binding periplasmic protein [Escherichia coli KTE10]
gi|431017699|gb|ELD31154.1| putrescine-binding periplasmic protein [Escherichia coli KTE212]
gi|431212330|gb|ELF10257.1| putrescine-binding periplasmic protein [Escherichia coli KTE119]
gi|431412817|gb|ELG95616.1| putrescine-binding periplasmic protein [Escherichia coli KTE154]
gi|431695675|gb|ELJ60977.1| putrescine-binding periplasmic protein [Escherichia coli KTE232]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|16799874|ref|NP_470142.1| hypothetical protein lin0800 [Listeria innocua Clip11262]
gi|16413251|emb|CAC96032.1| lin0800 [Listeria innocua Clip11262]
Length = 357
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 39/160 (24%)
Query: 3 ENGFKDWKDLWLPELAGRISMVNSPREVIGT-----------------QAAAGRIAVQQ- 44
+ F W L+ PEL +I +++ REV+G QAA ++
Sbjct: 152 DKNFDTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKSHLQAARDKLETMTP 211
Query: 45 NL-ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 103
N+ A++G++++L + + +AV +S + + ++ V+PK G++LW
Sbjct: 212 NVKAIVGDEIKL--------LMADNEAGVAVTFSGEAAEMLSENEDLEYVIPKDGSNLWF 263
Query: 104 DLWAIPAASRLETKQIGGRVRGPFPLIHQWIEFCLQTARA 143
D IP + K + G H++I F L+ A
Sbjct: 264 DNMVIPKTA----KNVDGA--------HKFINFMLKPENA 291
>gi|417601190|ref|ZP_12251772.1| putrescine-binding periplasmic protein [Escherichia coli STEC_94C]
gi|345353196|gb|EGW85432.1| putrescine-binding periplasmic protein [Escherichia coli STEC_94C]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|386830638|ref|YP_006237292.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus HO 5096 0412]
gi|417798993|ref|ZP_12446145.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21310]
gi|418655576|ref|ZP_13217427.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-105]
gi|334274885|gb|EGL93191.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21310]
gi|375036327|gb|EHS29402.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-105]
gi|385196030|emb|CCG15647.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus HO 5096 0412]
Length = 357
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVR 54
F WK L+ P+ +I +V+ RE+IG + + +++L L QVR
Sbjct: 155 FDSWKSLYNPKFKNQILLVDGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVR 214
Query: 55 LFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 113
+ + IAV WS P V+ V+PK G++LW D IP ++
Sbjct: 215 GVVGDEITMMLQQNEGNIAVVWSGVAAPLVQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|218553440|ref|YP_002386353.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli IAI1]
gi|417130876|ref|ZP_11976147.1| putrescine-binding periplasmic protein [Escherichia coli 5.0588]
gi|419806824|ref|ZP_14331914.1| bacterial extracellular solute-binding protein [Escherichia coli
AI27]
gi|419952129|ref|ZP_14468305.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CUMT8]
gi|432749336|ref|ZP_19983948.1| putrescine-binding periplasmic protein [Escherichia coli KTE29]
gi|432804981|ref|ZP_20038922.1| putrescine-binding periplasmic protein [Escherichia coli KTE91]
gi|432933420|ref|ZP_20133088.1| putrescine-binding periplasmic protein [Escherichia coli KTE184]
gi|432966952|ref|ZP_20155868.1| putrescine-binding periplasmic protein [Escherichia coli KTE203]
gi|433192847|ref|ZP_20376859.1| putrescine-binding periplasmic protein [Escherichia coli KTE90]
gi|218360208|emb|CAQ97758.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli IAI1]
gi|384470184|gb|EIE54305.1| bacterial extracellular solute-binding protein [Escherichia coli
AI27]
gi|386153984|gb|EIH05265.1| putrescine-binding periplasmic protein [Escherichia coli 5.0588]
gi|388413096|gb|EIL73112.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CUMT8]
gi|431298626|gb|ELF88250.1| putrescine-binding periplasmic protein [Escherichia coli KTE29]
gi|431356593|gb|ELG43283.1| putrescine-binding periplasmic protein [Escherichia coli KTE91]
gi|431455062|gb|ELH35418.1| putrescine-binding periplasmic protein [Escherichia coli KTE184]
gi|431472924|gb|ELH52758.1| putrescine-binding periplasmic protein [Escherichia coli KTE203]
gi|431720070|gb|ELJ84105.1| putrescine-binding periplasmic protein [Escherichia coli KTE90]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|212696357|ref|ZP_03304485.1| hypothetical protein ANHYDRO_00894 [Anaerococcus hydrogenalis DSM
7454]
gi|212676635|gb|EEB36242.1| hypothetical protein ANHYDRO_00894 [Anaerococcus hydrogenalis DSM
7454]
Length = 359
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 35/145 (24%)
Query: 6 FKDWKDLWLPELAGRISMVNSPREVIGT------------------QAAAGRIAVQQNL- 46
F WK+LW P+ G I + RE +G Q + +N+
Sbjct: 155 FSSWKNLWDPKFEGEILSFDGARETLGIGLLANGKSLNETDEKVLRQTKDELVGFMKNVK 214
Query: 47 ALLGNQVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 106
A+L +++R++ G+ + + +S + A N++ +PK G+++W D
Sbjct: 215 AILADEIRMY--------MAQGEADVGITFSGEASMAESINPNLSYTIPKEGSNIWFDTM 266
Query: 107 AIPAASRLETKQIGGRVRGPFPLIH 131
IP S+ +G + LI+
Sbjct: 267 VIPKTSK--------NTKGAYALIN 283
>gi|191166164|ref|ZP_03027998.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B7A]
gi|417595859|ref|ZP_12246518.1| putrescine-binding periplasmic protein [Escherichia coli 3030-1]
gi|190903773|gb|EDV63488.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B7A]
gi|345358605|gb|EGW90788.1| putrescine-binding periplasmic protein [Escherichia coli 3030-1]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|432946095|ref|ZP_20141788.1| putrescine-binding periplasmic protein [Escherichia coli KTE196]
gi|433042361|ref|ZP_20229883.1| putrescine-binding periplasmic protein [Escherichia coli KTE117]
gi|431462087|gb|ELH42305.1| putrescine-binding periplasmic protein [Escherichia coli KTE196]
gi|431559359|gb|ELI32919.1| putrescine-binding periplasmic protein [Escherichia coli KTE117]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|429048944|ref|ZP_19113597.1| putrescine-binding periplasmic protein [Escherichia coli 97.0003]
gi|427304345|gb|EKW67002.1| putrescine-binding periplasmic protein [Escherichia coli 97.0003]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|82776067|ref|YP_402414.1| putrescine ABC transporter periplasmic-binding protein [Shigella
dysenteriae Sd197]
gi|309786474|ref|ZP_07681098.1| putrescine-binding periplasmic protein [Shigella dysenteriae 1617]
gi|81240215|gb|ABB60925.1| periplasmic putrescine-binding protein [Shigella dysenteriae Sd197]
gi|308925662|gb|EFP71145.1| putrescine-binding periplasmic protein [Shigella dysenteriae 1617]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEANNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|418296592|ref|ZP_12908435.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens CCNWGS0286]
gi|355538767|gb|EHH08009.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens CCNWGS0286]
Length = 365
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V+ F+ + Y+ GD I +GWS D+L A R V ++PK G +W D
Sbjct: 216 VKTFNSSAYIDELANGDSCITIGWSGDILQAKSRAEEAKNGVEVNYIIPKEGTYMWFDNL 275
Query: 107 AIPAASR 113
AIPA ++
Sbjct: 276 AIPADAK 282
>gi|227512618|ref|ZP_03942667.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, substrate binding protein [Lactobacillus
buchneri ATCC 11577]
gi|227522844|ref|ZP_03952893.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, substrate binding protein [Lactobacillus
hilgardii ATCC 8290]
gi|227084083|gb|EEI19395.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, substrate binding protein [Lactobacillus
buchneri ATCC 11577]
gi|227089996|gb|EEI25308.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, substrate binding protein [Lactobacillus
hilgardii ATCC 8290]
Length = 356
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 79/206 (38%), Gaps = 32/206 (15%)
Query: 9 WKDLWLPELAGRISMVNSPREVIG-----------TQAAAGRIAVQQNLALLGNQVRLFD 57
W LW + I +++S R+++G T IA + L L V+
Sbjct: 158 WDQLWHSKYRNDIMLIDSARDIMGFSLISQGHSVNTTNTKELIAAKNKLNRLSPNVKAVV 217
Query: 58 RTHYLKVFGIGDVWIAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 117
G+ IAV WS + + + +++ VVP G+++W D IP ++
Sbjct: 218 ADEIKMYMAEGEAPIAVDWSGEATEMMSQNAHLHYVVPTEGSNMWFDNLVIPKTAK---- 273
Query: 118 QIGGRVRGPFPLIHQWIEF------CLQTARALPFNTRVKLPEELLKGKPSLDTKLIAGV 171
F I+ ++ F Q A+ + ++T +LL K D K
Sbjct: 274 --------HFKAIYAFLNFMNKPENAAQNAKYIGYSTPNTDAYKLLP-KSVRDNKQF--Y 322
Query: 172 PPAEILARCEFLEPLSEATLSDYEWL 197
PP ++L + E LS + Y L
Sbjct: 323 PPKQVLDKLEVYSNLSAKKVQQYNDL 348
>gi|220924807|ref|YP_002500109.1| family 1 extracellular solute-binding protein [Methylobacterium
nodulans ORS 2060]
gi|219949414|gb|ACL59806.1| extracellular solute-binding protein family 1 [Methylobacterium
nodulans ORS 2060]
Length = 366
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 53 VRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 106
V+ F + Y+ GDV ++VG+S DVL A KR ++A +P+ GA +W D +
Sbjct: 217 VQKFHSSEYINQLANGDVCLSVGYSGDVLQARKRAQEAKNDVDIAYYIPQQGALMWFDSF 276
Query: 107 AIPAASRLETKQIGGRVRGPFPL-IHQWIEFCLQ 139
AIP + P P H +I+F L+
Sbjct: 277 AIPKDA-------------PHPAEAHAFIDFMLR 297
>gi|157157062|ref|YP_001462051.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli E24377A]
gi|307311758|ref|ZP_07591398.1| extracellular solute-binding protein family 1 [Escherichia coli W]
gi|378713742|ref|YP_005278635.1| extracellular solute-binding protein [Escherichia coli KO11FL]
gi|386608222|ref|YP_006123708.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli W]
gi|386702331|ref|YP_006166168.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli KO11FL]
gi|386708666|ref|YP_006172387.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli W]
gi|417161332|ref|ZP_11997568.1| putrescine-binding periplasmic protein [Escherichia coli 99.0741]
gi|419369124|ref|ZP_13910250.1| putrescine-binding periplasmic protein [Escherichia coli DEC14A]
gi|419928713|ref|ZP_14446420.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-1]
gi|422959017|ref|ZP_16970948.1| putrescine-binding periplasmic protein [Escherichia coli H494]
gi|432764176|ref|ZP_19998624.1| putrescine-binding periplasmic protein [Escherichia coli KTE48]
gi|450212610|ref|ZP_21894582.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O08]
gi|157079092|gb|ABV18800.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E24377A]
gi|306908313|gb|EFN38812.1| extracellular solute-binding protein family 1 [Escherichia coli W]
gi|315060139|gb|ADT74466.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli W]
gi|323379303|gb|ADX51571.1| extracellular solute-binding protein family 1 [Escherichia coli
KO11FL]
gi|371595673|gb|EHN84521.1| putrescine-binding periplasmic protein [Escherichia coli H494]
gi|378220799|gb|EHX81050.1| putrescine-binding periplasmic protein [Escherichia coli DEC14A]
gi|383393858|gb|AFH18816.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KO11FL]
gi|383404358|gb|AFH10601.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli W]
gi|386173868|gb|EIH45869.1| putrescine-binding periplasmic protein [Escherichia coli 99.0741]
gi|388405079|gb|EIL65516.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-1]
gi|431312755|gb|ELG00744.1| putrescine-binding periplasmic protein [Escherichia coli KTE48]
gi|449321719|gb|EMD11729.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O08]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|16128822|ref|NP_415375.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
MG1655]
gi|82543342|ref|YP_407289.1| putrescine ABC transporter periplasmic-binding protein [Shigella
boydii Sb227]
gi|170080513|ref|YP_001729833.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli str. K-12 substr. DH10B]
gi|187731226|ref|YP_001880949.1| putrescine ABC transporter periplasmic-binding protein [Shigella
boydii CDC 3083-94]
gi|218694328|ref|YP_002401995.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli 55989]
gi|238900113|ref|YP_002925909.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli BW2952]
gi|293433152|ref|ZP_06661580.1| hypothetical protein ECCG_01277 [Escherichia coli B088]
gi|331667228|ref|ZP_08368093.1| putrescine-binding periplasmic protein [Escherichia coli TA271]
gi|386279901|ref|ZP_10057574.1| putrescine-binding periplasmic protein [Escherichia sp. 4_1_40B]
gi|386596310|ref|YP_006092710.1| extracellular solute-binding protein [Escherichia coli DH1]
gi|387620580|ref|YP_006128207.1| putrescine transporter subunit:periplasmic-binding component of ABC
superfamily [Escherichia coli DH1]
gi|388476939|ref|YP_489127.1| putrescine transporter subunit [Escherichia coli str. K-12 substr.
W3110]
gi|407468328|ref|YP_006785230.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2009EL-2071]
gi|407482940|ref|YP_006780089.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2011C-3493]
gi|410483492|ref|YP_006771038.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2009EL-2050]
gi|415812750|ref|ZP_11504845.1| putrescine-binding periplasmic protein [Escherichia coli LT-68]
gi|415827641|ref|ZP_11514466.1| putrescine-binding periplasmic protein [Escherichia coli OK1357]
gi|416267761|ref|ZP_11641934.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella dysenteriae CDC 74-1112]
gi|416304941|ref|ZP_11654096.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella flexneri CDC 796-83]
gi|416345141|ref|ZP_11678784.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli EC4100B]
gi|417224560|ref|ZP_12027851.1| putrescine-binding periplasmic protein [Escherichia coli 96.154]
gi|417241354|ref|ZP_12037300.1| putrescine-binding periplasmic protein [Escherichia coli 9.0111]
gi|417262034|ref|ZP_12049522.1| putrescine-binding periplasmic protein [Escherichia coli 2.3916]
gi|417268341|ref|ZP_12055702.1| putrescine-binding periplasmic protein [Escherichia coli 3.3884]
gi|417274279|ref|ZP_12061619.1| putrescine-binding periplasmic protein [Escherichia coli 2.4168]
gi|417277787|ref|ZP_12065108.1| putrescine-binding periplasmic protein [Escherichia coli 3.2303]
gi|417290075|ref|ZP_12077358.1| putrescine-binding periplasmic protein [Escherichia coli B41]
gi|417607078|ref|ZP_12257597.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_DG131-3]
gi|417611949|ref|ZP_12262421.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_EH250]
gi|417617293|ref|ZP_12267723.1| putrescine-binding periplasmic protein [Escherichia coli G58-1]
gi|417633487|ref|ZP_12283706.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_S1191]
gi|417681255|ref|ZP_12330633.1| putrescine-binding periplasmic protein [Shigella boydii 3594-74]
gi|417804235|ref|ZP_12451266.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. LB226692]
gi|417831986|ref|ZP_12478506.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. 01-09591]
gi|417864139|ref|ZP_12509186.1| potF [Escherichia coli O104:H4 str. C227-11]
gi|417943847|ref|ZP_12587093.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH140A]
gi|417975178|ref|ZP_12615978.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH001]
gi|418042980|ref|ZP_12681161.1| bacterial extracellular solute-binding protein [Escherichia coli
W26]
gi|418301780|ref|ZP_12913574.1| putrescine-binding periplasmic protein [Escherichia coli UMNF18]
gi|418958811|ref|ZP_13510721.1| bacterial extracellular solute-binding protein [Escherichia coli
J53]
gi|419141372|ref|ZP_13686126.1| putrescine-binding periplasmic protein [Escherichia coli DEC6A]
gi|419152772|ref|ZP_13697355.1| putrescine-binding periplasmic protein [Escherichia coli DEC6C]
gi|419158187|ref|ZP_13702704.1| putrescine-binding periplasmic protein [Escherichia coli DEC6D]
gi|419163121|ref|ZP_13707597.1| potF [Escherichia coli DEC6E]
gi|419174361|ref|ZP_13718213.1| potF [Escherichia coli DEC7B]
gi|419277125|ref|ZP_13819386.1| potF [Escherichia coli DEC10E]
gi|419344479|ref|ZP_13885861.1| potF [Escherichia coli DEC13A]
gi|419348918|ref|ZP_13890271.1| potF [Escherichia coli DEC13B]
gi|419353906|ref|ZP_13895188.1| potF [Escherichia coli DEC13C]
gi|419359301|ref|ZP_13900526.1| potF [Escherichia coli DEC13D]
gi|419364270|ref|ZP_13905448.1| potF [Escherichia coli DEC13E]
gi|419374613|ref|ZP_13915661.1| potF [Escherichia coli DEC14B]
gi|419379848|ref|ZP_13920820.1| potF [Escherichia coli DEC14C]
gi|419385250|ref|ZP_13926138.1| potF [Escherichia coli DEC14D]
gi|419390310|ref|ZP_13931144.1| potF [Escherichia coli DEC15A]
gi|419400824|ref|ZP_13941555.1| potF [Escherichia coli DEC15C]
gi|419406035|ref|ZP_13946734.1| potF [Escherichia coli DEC15D]
gi|419411498|ref|ZP_13952166.1| potF [Escherichia coli DEC15E]
gi|419809532|ref|ZP_14334417.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O32:H37 str. P4]
gi|419925739|ref|ZP_14443568.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-15]
gi|419940973|ref|ZP_14457687.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 75]
gi|420324628|ref|ZP_14826408.1| putrescine-binding periplasmic protein [Shigella flexneri CCH060]
gi|420353441|ref|ZP_14854558.1| putrescine-binding periplasmic protein [Shigella boydii 4444-74]
gi|421681582|ref|ZP_16121408.1| potF [Shigella flexneri 1485-80]
gi|422819882|ref|ZP_16868092.1| putrescine-binding periplasmic protein [Escherichia coli M919]
gi|422991589|ref|ZP_16982360.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C227-11]
gi|422993531|ref|ZP_16984295.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C236-11]
gi|422998742|ref|ZP_16989498.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 09-7901]
gi|423007203|ref|ZP_16997946.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 04-8351]
gi|423008849|ref|ZP_16999587.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-3677]
gi|423023037|ref|ZP_17013740.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4404]
gi|423028189|ref|ZP_17018882.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4522]
gi|423034023|ref|ZP_17024707.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4623]
gi|423036889|ref|ZP_17027563.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423042008|ref|ZP_17032675.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423048698|ref|ZP_17039355.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423052280|ref|ZP_17041088.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423059246|ref|ZP_17048042.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C5]
gi|423701702|ref|ZP_17676161.1| putrescine-binding periplasmic protein [Escherichia coli H730]
gi|423708776|ref|ZP_17683154.1| putrescine-binding periplasmic protein [Escherichia coli B799]
gi|425114214|ref|ZP_18516035.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0566]
gi|425118923|ref|ZP_18520645.1| putrescine-binding periplasmic protein [Escherichia coli 8.0569]
gi|425271605|ref|ZP_18663100.1| putrescine-binding periplasmic protein [Escherichia coli TW15901]
gi|425282258|ref|ZP_18673363.1| putrescine-binding periplasmic protein [Escherichia coli TW00353]
gi|429723080|ref|ZP_19257969.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9450]
gi|429775254|ref|ZP_19307252.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02030]
gi|429780443|ref|ZP_19312392.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02033-1]
gi|429784494|ref|ZP_19316403.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02092]
gi|429789831|ref|ZP_19321703.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02093]
gi|429796061|ref|ZP_19327884.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02281]
gi|429801986|ref|ZP_19333761.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02318]
gi|429805618|ref|ZP_19337362.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02913]
gi|429811214|ref|ZP_19342913.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03439]
gi|429816565|ref|ZP_19348221.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-04080]
gi|429821773|ref|ZP_19353385.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03943]
gi|429907442|ref|ZP_19373410.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9990]
gi|429911643|ref|ZP_19377599.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9941]
gi|429917478|ref|ZP_19383418.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4984]
gi|429922516|ref|ZP_19388437.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5604]
gi|429923369|ref|ZP_19389285.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4986]
gi|429932264|ref|ZP_19398158.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4987]
gi|429933866|ref|ZP_19399756.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4988]
gi|429939525|ref|ZP_19405399.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5603]
gi|429947167|ref|ZP_19413022.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-6006]
gi|429949799|ref|ZP_19415647.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0465]
gi|429958077|ref|ZP_19423906.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0466]
gi|432375966|ref|ZP_19618974.1| putrescine-binding periplasmic protein [Escherichia coli KTE12]
gi|432415841|ref|ZP_19658465.1| putrescine-binding periplasmic protein [Escherichia coli KTE44]
gi|432480228|ref|ZP_19722190.1| putrescine-binding periplasmic protein [Escherichia coli KTE210]
gi|432533080|ref|ZP_19770071.1| putrescine-binding periplasmic protein [Escherichia coli KTE234]
gi|432562836|ref|ZP_19799456.1| putrescine-binding periplasmic protein [Escherichia coli KTE51]
gi|432626460|ref|ZP_19862441.1| putrescine-binding periplasmic protein [Escherichia coli KTE77]
gi|432636127|ref|ZP_19872009.1| putrescine-binding periplasmic protein [Escherichia coli KTE81]
gi|432660081|ref|ZP_19895731.1| putrescine-binding periplasmic protein [Escherichia coli KTE111]
gi|432684658|ref|ZP_19919970.1| putrescine-binding periplasmic protein [Escherichia coli KTE156]
gi|432690779|ref|ZP_19926018.1| putrescine-binding periplasmic protein [Escherichia coli KTE161]
gi|432703423|ref|ZP_19938542.1| putrescine-binding periplasmic protein [Escherichia coli KTE171]
gi|432736354|ref|ZP_19971125.1| putrescine-binding periplasmic protein [Escherichia coli KTE42]
gi|432812956|ref|ZP_20046801.1| putrescine-binding periplasmic protein [Escherichia coli KTE101]
gi|432833936|ref|ZP_20067478.1| putrescine-binding periplasmic protein [Escherichia coli KTE136]
gi|432954154|ref|ZP_20146273.1| putrescine-binding periplasmic protein [Escherichia coli KTE197]
gi|433046991|ref|ZP_20234401.1| putrescine-binding periplasmic protein [Escherichia coli KTE120]
gi|442593231|ref|ZP_21011185.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|450240880|ref|ZP_21899436.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S17]
gi|2507606|sp|P31133.3|POTF_ECOLI RecName: Full=Putrescine-binding periplasmic protein; Flags:
Precursor
gi|1651387|dbj|BAA35565.1| putrescine transporter subunit [Escherichia coli str. K12 substr.
W3110]
gi|1787078|gb|AAC73941.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
MG1655]
gi|81244753|gb|ABB65461.1| periplasmic putrescine-binding protein [Shigella boydii Sb227]
gi|169888348|gb|ACB02055.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
DH10B]
gi|187428218|gb|ACD07492.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella boydii CDC 3083-94]
gi|218351060|emb|CAU96764.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 55989]
gi|238863342|gb|ACR65340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli BW2952]
gi|260449999|gb|ACX40421.1| extracellular solute-binding protein family 1 [Escherichia coli
DH1]
gi|291323971|gb|EFE63393.1| hypothetical protein ECCG_01277 [Escherichia coli B088]
gi|315135503|dbj|BAJ42662.1| putrescine transporter subunit:periplasmic-binding component of ABC
superfamily [Escherichia coli DH1]
gi|320175294|gb|EFW50400.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella dysenteriae CDC 74-1112]
gi|320183206|gb|EFW58064.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella flexneri CDC 796-83]
gi|320199089|gb|EFW73686.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli EC4100B]
gi|323172180|gb|EFZ57818.1| putrescine-binding periplasmic protein [Escherichia coli LT-68]
gi|323185182|gb|EFZ70547.1| putrescine-binding periplasmic protein [Escherichia coli OK1357]
gi|331065584|gb|EGI37477.1| putrescine-binding periplasmic protein [Escherichia coli TA271]
gi|332097188|gb|EGJ02171.1| putrescine-binding periplasmic protein [Shigella boydii 3594-74]
gi|339413878|gb|AEJ55550.1| putrescine-binding periplasmic protein [Escherichia coli UMNF18]
gi|340735276|gb|EGR64334.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. 01-09591]
gi|340741099|gb|EGR75249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. LB226692]
gi|341917428|gb|EGT67044.1| potF [Escherichia coli O104:H4 str. C227-11]
gi|342364333|gb|EGU28434.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH140A]
gi|344195169|gb|EGV49239.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH001]
gi|345363669|gb|EGW95810.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_DG131-3]
gi|345365298|gb|EGW97407.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_EH250]
gi|345380465|gb|EGX12364.1| putrescine-binding periplasmic protein [Escherichia coli G58-1]
gi|345390201|gb|EGX20000.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_S1191]
gi|354856591|gb|EHF17049.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 04-8351]
gi|354857838|gb|EHF18291.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C227-11]
gi|354864606|gb|EHF25035.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C236-11]
gi|354874919|gb|EHF35285.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 09-7901]
gi|354878879|gb|EHF39226.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4404]
gi|354882671|gb|EHF42993.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-3677]
gi|354884293|gb|EHF44606.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4522]
gi|354887350|gb|EHF47625.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4623]
gi|354900545|gb|EHF60679.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354903690|gb|EHF63790.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354906053|gb|EHF66135.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354916970|gb|EHF76940.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C5]
gi|354921031|gb|EHF80956.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C4]
gi|359331546|dbj|BAL37993.1| putrescine transporter subunit [Escherichia coli str. K-12 substr.
MDS42]
gi|377998987|gb|EHV62074.1| putrescine-binding periplasmic protein [Escherichia coli DEC6A]
gi|378002122|gb|EHV65175.1| putrescine-binding periplasmic protein [Escherichia coli DEC6C]
gi|378012276|gb|EHV75208.1| putrescine-binding periplasmic protein [Escherichia coli DEC6D]
gi|378015823|gb|EHV78714.1| potF [Escherichia coli DEC6E]
gi|378036704|gb|EHV99243.1| potF [Escherichia coli DEC7B]
gi|378132294|gb|EHW93646.1| potF [Escherichia coli DEC10E]
gi|378188907|gb|EHX49501.1| potF [Escherichia coli DEC13A]
gi|378204580|gb|EHX64996.1| potF [Escherichia coli DEC13B]
gi|378206760|gb|EHX67162.1| potF [Escherichia coli DEC13D]
gi|378207878|gb|EHX68266.1| potF [Escherichia coli DEC13C]
gi|378217725|gb|EHX78001.1| potF [Escherichia coli DEC13E]
gi|378223981|gb|EHX84189.1| potF [Escherichia coli DEC14B]
gi|378232035|gb|EHX92138.1| potF [Escherichia coli DEC14C]
gi|378234699|gb|EHX94775.1| potF [Escherichia coli DEC14D]
gi|378242613|gb|EHY02565.1| potF [Escherichia coli DEC15A]
gi|378251129|gb|EHY11030.1| potF [Escherichia coli DEC15C]
gi|378256876|gb|EHY16721.1| potF [Escherichia coli DEC15D]
gi|378260718|gb|EHY20518.1| potF [Escherichia coli DEC15E]
gi|383474083|gb|EID66081.1| bacterial extracellular solute-binding protein [Escherichia coli
W26]
gi|384378552|gb|EIE36433.1| bacterial extracellular solute-binding protein [Escherichia coli
J53]
gi|385157713|gb|EIF19704.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O32:H37 str. P4]
gi|385536497|gb|EIF83390.1| putrescine-binding periplasmic protein [Escherichia coli M919]
gi|385707497|gb|EIG44528.1| putrescine-binding periplasmic protein [Escherichia coli B799]
gi|385711690|gb|EIG48647.1| putrescine-binding periplasmic protein [Escherichia coli H730]
gi|386122970|gb|EIG71574.1| putrescine-binding periplasmic protein [Escherichia sp. 4_1_40B]
gi|386199608|gb|EIH98599.1| putrescine-binding periplasmic protein [Escherichia coli 96.154]
gi|386212035|gb|EII22484.1| putrescine-binding periplasmic protein [Escherichia coli 9.0111]
gi|386225161|gb|EII47496.1| putrescine-binding periplasmic protein [Escherichia coli 2.3916]
gi|386230699|gb|EII58054.1| putrescine-binding periplasmic protein [Escherichia coli 3.3884]
gi|386232707|gb|EII64692.1| putrescine-binding periplasmic protein [Escherichia coli 2.4168]
gi|386239474|gb|EII76403.1| putrescine-binding periplasmic protein [Escherichia coli 3.2303]
gi|386256113|gb|EIJ05801.1| putrescine-binding periplasmic protein [Escherichia coli B41]
gi|388385634|gb|EIL47309.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-15]
gi|388401822|gb|EIL62435.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 75]
gi|391255716|gb|EIQ14857.1| putrescine-binding periplasmic protein [Shigella flexneri CCH060]
gi|391278930|gb|EIQ37626.1| putrescine-binding periplasmic protein [Shigella boydii 4444-74]
gi|404341533|gb|EJZ67939.1| potF [Shigella flexneri 1485-80]
gi|406778654|gb|AFS58078.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055237|gb|AFS75288.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2011C-3493]
gi|407064363|gb|AFS85410.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408197064|gb|EKI22335.1| putrescine-binding periplasmic protein [Escherichia coli TW15901]
gi|408205387|gb|EKI30275.1| putrescine-binding periplasmic protein [Escherichia coli TW00353]
gi|408571926|gb|EKK47853.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0566]
gi|408572938|gb|EKK48819.1| putrescine-binding periplasmic protein [Escherichia coli 8.0569]
gi|429349989|gb|EKY86724.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02030]
gi|429350701|gb|EKY87426.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02033-1]
gi|429351079|gb|EKY87800.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02092]
gi|429365357|gb|EKZ01970.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02093]
gi|429366308|gb|EKZ02911.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02281]
gi|429368871|gb|EKZ05454.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02318]
gi|429381278|gb|EKZ17765.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02913]
gi|429382246|gb|EKZ18711.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03439]
gi|429383681|gb|EKZ20140.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03943]
gi|429395512|gb|EKZ31878.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-04080]
gi|429396726|gb|EKZ33074.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9450]
gi|429397604|gb|EKZ33950.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9990]
gi|429409332|gb|EKZ45562.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4984]
gi|429417792|gb|EKZ53939.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4987]
gi|429421461|gb|EKZ57582.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4988]
gi|429423201|gb|EKZ59309.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4986]
gi|429427203|gb|EKZ63288.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5603]
gi|429434085|gb|EKZ70114.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5604]
gi|429438072|gb|EKZ74066.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0465]
gi|429443428|gb|EKZ79380.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-6006]
gi|429449531|gb|EKZ85430.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0466]
gi|429455407|gb|EKZ91263.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9941]
gi|430900594|gb|ELC22612.1| putrescine-binding periplasmic protein [Escherichia coli KTE12]
gi|430942386|gb|ELC62519.1| putrescine-binding periplasmic protein [Escherichia coli KTE44]
gi|431009710|gb|ELD24324.1| putrescine-binding periplasmic protein [Escherichia coli KTE210]
gi|431062801|gb|ELD72061.1| putrescine-binding periplasmic protein [Escherichia coli KTE234]
gi|431097397|gb|ELE02725.1| putrescine-binding periplasmic protein [Escherichia coli KTE51]
gi|431164408|gb|ELE64799.1| putrescine-binding periplasmic protein [Escherichia coli KTE77]
gi|431173021|gb|ELE73102.1| putrescine-binding periplasmic protein [Escherichia coli KTE81]
gi|431201953|gb|ELF00649.1| putrescine-binding periplasmic protein [Escherichia coli KTE111]
gi|431224165|gb|ELF21394.1| putrescine-binding periplasmic protein [Escherichia coli KTE156]
gi|431229165|gb|ELF25817.1| putrescine-binding periplasmic protein [Escherichia coli KTE161]
gi|431245988|gb|ELF40266.1| putrescine-binding periplasmic protein [Escherichia coli KTE171]
gi|431285894|gb|ELF76729.1| putrescine-binding periplasmic protein [Escherichia coli KTE42]
gi|431356162|gb|ELG42853.1| putrescine-binding periplasmic protein [Escherichia coli KTE101]
gi|431386817|gb|ELG70770.1| putrescine-binding periplasmic protein [Escherichia coli KTE136]
gi|431469452|gb|ELH49381.1| putrescine-binding periplasmic protein [Escherichia coli KTE197]
gi|431571099|gb|ELI44006.1| putrescine-binding periplasmic protein [Escherichia coli KTE120]
gi|441606984|emb|CCP96512.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|449324103|gb|EMD14041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S17]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R NV+ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
>gi|336249457|ref|YP_004593167.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter aerogenes KCTC 2190]
gi|444352385|ref|YP_007388529.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Enterobacter aerogenes EA1509E]
gi|334735513|gb|AEG97888.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter aerogenes KCTC 2190]
gi|443903215|emb|CCG30989.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Enterobacter aerogenes EA1509E]
Length = 370
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 52 QVRLFDRTHYLKVFGIGDVWIAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 105
+R F + Y+ GD+ +A+GW+ DV A R N++ +PK GA + D+
Sbjct: 220 NIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYFIPKEGALAFFDV 279
Query: 106 WAIPAASR 113
+A+PA ++
Sbjct: 280 FAMPADAK 287
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,569,676,980
Number of Sequences: 23463169
Number of extensions: 141639228
Number of successful extensions: 314521
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 2345
Number of HSP's that attempted gapping in prelim test: 311182
Number of HSP's gapped (non-prelim): 2975
length of query: 215
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 79
effective length of database: 9,168,204,383
effective search space: 724288146257
effective search space used: 724288146257
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)