Your job contains 1 sequence.
>040874
MNLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQD
WFKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISM
VNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040874
(165 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2206194 - symbol:AT1G31410 species:3702 "Arabi... 494 3.3e-47 1
TIGR_CMR|BA_1300 - symbol:BA_1300 "spermidine/putrescine ... 119 9.9e-07 1
UNIPROTKB|Q9KS37 - symbol:VC1424 "Spermidine/putrescine A... 105 0.00030 1
TIGR_CMR|VC_1424 - symbol:VC_1424 "spermidine/putrescine ... 105 0.00030 1
TIGR_CMR|CPS_2036 - symbol:CPS_2036 "spermidine/putrescin... 96 0.00048 2
UNIPROTKB|P31133 - symbol:potF "putrescine ABC transporte... 103 0.00074 1
UNIPROTKB|P0AFK9 - symbol:potD "putrescine / spermidine A... 102 0.00093 1
>TAIR|locus:2206194 [details] [associations]
symbol:AT1G31410 species:3702 "Arabidopsis thaliana"
[GO:0005215 "transporter activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001188
PRINTS:PR00909 EMBL:CP002684 GO:GO:0009941 GO:GO:0042597
eggNOG:COG0687 GO:GO:0019808 GO:GO:0015846 EMBL:BT015412
IPI:IPI00520881 RefSeq:NP_174426.2 UniGene:At.40347
ProteinModelPortal:Q66GJ0 PaxDb:Q66GJ0 PRIDE:Q66GJ0
EnsemblPlants:AT1G31410.1 GeneID:840031 KEGG:ath:AT1G31410
TAIR:At1g31410 InParanoid:Q66GJ0 OMA:GTMVIAY PhylomeDB:Q66GJ0
ProtClustDB:CLSN2680340 Genevestigator:Q66GJ0 Uniprot:Q66GJ0
Length = 524
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 96/158 (60%), Positives = 120/158 (75%)
Query: 6 SIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCL 65
+++ IF +LS P K +AS AAD++S+GD WLSFAI+++LIEP+ G EDQDW+K L
Sbjct: 153 NLEEIFFDLSKPSKNGKKGAASTAAADMISIGDSWLSFAIKEKLIEPMKGIEDQDWYKGL 212
Query: 66 SHKWK---RTR--------GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPEL 114
S KWK R G+ WA PYRWG M+IAYKKSKF+ + LAPIEDW DLWRPEL
Sbjct: 213 SDKWKIYLRRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRPEL 272
Query: 115 AGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGK 152
AGRI+MVNSPREV+G+VLKYM ASYN+ ++DSQV GG+
Sbjct: 273 AGRIAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGR 310
>TIGR_CMR|BA_1300 [details] [associations]
symbol:BA_1300 "spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0015417 "polyamine-transporting ATPase
activity" evidence=ISS] [GO:0015847 "putrescine transport"
evidence=ISS] [GO:0015848 "spermidine transport" evidence=ISS]
[GO:0042626 "ATPase activity, coupled to transmembrane movement of
substances" evidence=ISS] InterPro:IPR001188 PIRSF:PIRSF019574
PRINTS:PR00909 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0042597 KO:K11069 GO:GO:0019808
HOGENOM:HOG000263814 GO:GO:0015846 RefSeq:NP_843768.1
RefSeq:YP_017915.1 RefSeq:YP_027472.1 HSSP:P23861
ProteinModelPortal:Q81TH5 IntAct:Q81TH5 DNASU:1085223
EnsemblBacteria:EBBACT00000008763 EnsemblBacteria:EBBACT00000013649
EnsemblBacteria:EBBACT00000023557 GeneID:1085223 GeneID:2815193
GeneID:2852748 KEGG:ban:BA_1300 KEGG:bar:GBAA_1300 KEGG:bat:BAS1202
OMA:LYSWADY ProtClustDB:CLSK916172
BioCyc:BANT260799:GJAJ-1277-MONOMER
BioCyc:BANT261594:GJ7F-1335-MONOMER Uniprot:Q81TH5
Length = 345
Score = 119 (46.9 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
Y WG IAY K K+ K AP W DLW + G ++++N REV+G LK G S N
Sbjct: 126 YTWGVTGIAYNK-KYVKE--APTS-WTDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-N 180
Query: 141 SNNIDSQV 148
S D+Q+
Sbjct: 181 STKDDAQL 188
>UNIPROTKB|Q9KS37 [details] [associations]
symbol:VC1424 "Spermidine/putrescine ABC transporter,
periplasmic spermidine/putrescine-binding protein" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0015417
"polyamine-transporting ATPase activity" evidence=ISS] [GO:0015847
"putrescine transport" evidence=ISS] [GO:0015848 "spermidine
transport" evidence=ISS] InterPro:IPR001188 PIRSF:PIRSF019574
PRINTS:PR00909 GenomeReviews:AE003852_GR GO:GO:0042597 KO:K11069
GO:GO:0019808 GO:GO:0015417 GO:GO:0015847 GO:GO:0015848 HSSP:P23861
EMBL:AE004221 PIR:B82201 RefSeq:NP_231067.1
ProteinModelPortal:Q9KS37 SMR:Q9KS37 DNASU:2614056 GeneID:2614056
KEGG:vch:VC1424 PATRIC:20081910 OMA:DMVFPKE ProtClustDB:CLSK874367
Uniprot:Q9KS37
Length = 345
Score = 105 (42.0 bits), Expect = 0.00030, P = 0.00030
Identities = 37/135 (27%), Positives = 63/135 (46%)
Query: 12 NNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR 71
+N S+ + K+K + A Y DLV ++S ++ +++ I + FK L +
Sbjct: 59 SNESM-YAKLKTQGAGY---DLVVPSTYFVSKMRKEGMLQEIDHSK-LSHFKDLDPNYLN 113
Query: 72 TR---GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVI 128
G ++ PY WGA I K L ++W DLW + AG++ +++ REV
Sbjct: 114 KPFDPGNKFSIPYIWGATGIGINTDMLDKKSL---KNWGDLWDAKWAGQLMLMDDAREVF 170
Query: 129 GSVLKYMGASYNSNN 143
L +G S N+ N
Sbjct: 171 HIALSKLGYSPNTTN 185
>TIGR_CMR|VC_1424 [details] [associations]
symbol:VC_1424 "spermidine/putrescine ABC transporter,
periplasmic spermidine/putrescine-binding protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0015417
"polyamine-transporting ATPase activity" evidence=ISS] [GO:0015847
"putrescine transport" evidence=ISS] [GO:0015848 "spermidine
transport" evidence=ISS] InterPro:IPR001188 PIRSF:PIRSF019574
PRINTS:PR00909 GenomeReviews:AE003852_GR GO:GO:0042597 KO:K11069
GO:GO:0019808 GO:GO:0015417 GO:GO:0015847 GO:GO:0015848 HSSP:P23861
EMBL:AE004221 PIR:B82201 RefSeq:NP_231067.1
ProteinModelPortal:Q9KS37 SMR:Q9KS37 DNASU:2614056 GeneID:2614056
KEGG:vch:VC1424 PATRIC:20081910 OMA:DMVFPKE ProtClustDB:CLSK874367
Uniprot:Q9KS37
Length = 345
Score = 105 (42.0 bits), Expect = 0.00030, P = 0.00030
Identities = 37/135 (27%), Positives = 63/135 (46%)
Query: 12 NNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR 71
+N S+ + K+K + A Y DLV ++S ++ +++ I + FK L +
Sbjct: 59 SNESM-YAKLKTQGAGY---DLVVPSTYFVSKMRKEGMLQEIDHSK-LSHFKDLDPNYLN 113
Query: 72 TR---GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVI 128
G ++ PY WGA I K L ++W DLW + AG++ +++ REV
Sbjct: 114 KPFDPGNKFSIPYIWGATGIGINTDMLDKKSL---KNWGDLWDAKWAGQLMLMDDAREVF 170
Query: 129 GSVLKYMGASYNSNN 143
L +G S N+ N
Sbjct: 171 HIALSKLGYSPNTTN 185
>TIGR_CMR|CPS_2036 [details] [associations]
symbol:CPS_2036 "spermidine/putrescine ABC transporter,
periplasmic spermidine/putrescine-binding protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0015417 "polyamine-transporting
ATPase activity" evidence=ISS] [GO:0015847 "putrescine transport"
evidence=ISS] [GO:0015848 "spermidine transport" evidence=ISS]
[GO:0019808 "polyamine binding" evidence=ISS] InterPro:IPR001188
PIRSF:PIRSF019574 PRINTS:PR00909 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0042597 eggNOG:COG0687 KO:K11069
GO:GO:0019808 HOGENOM:HOG000263814 GO:GO:0015846 RefSeq:YP_268764.1
ProteinModelPortal:Q483K2 STRING:Q483K2 GeneID:3520492
KEGG:cps:CPS_2036 PATRIC:21467195 OMA:PNIANIK
BioCyc:CPSY167879:GI48-2106-MONOMER Uniprot:Q483K2
Length = 342
Score = 96 (38.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 29/139 (20%), Positives = 65/139 (46%)
Query: 6 SIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCL 65
++D +N L K+K+ S+ Y D+V ++ I++ L++ I ++ FK +
Sbjct: 53 TLDSYTSNEDL-LAKLKSGSSDY---DVVFPSQHFVKIMIQEGLLKNI-DAKNMTAFKQV 107
Query: 66 SHKWKRT---RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE--LAGRISM 120
+WK + ++ P+ +G + K++ P WK+ + P AG +++
Sbjct: 108 DDRWKNKWWDKSSEYSIPFVYGTAGYTVNRDKYK----GPANSWKEFFEPTGAAAGNVAV 163
Query: 121 VNSPREVIGSVLKYMGASY 139
++P E+I + Y+ +
Sbjct: 164 FSTPDEIIPAAQLYLDIDF 182
Score = 41 (19.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 137 ASYNSNNIDSQVAGGK 152
A Y+S+NI S+++ G+
Sbjct: 205 AVYSSDNISSRISSGE 220
>UNIPROTKB|P31133 [details] [associations]
symbol:potF "putrescine ABC transporter - periplasmic
binding protein" species:83333 "Escherichia coli K-12" [GO:0019808
"polyamine binding" evidence=IEA] [GO:0015847 "putrescine
transport" evidence=IDA] [GO:0015594 "putrescine-importing ATPase
activity" evidence=RCA;IMP] [GO:0043190 "ATP-binding cassette (ABC)
transporter complex" evidence=RCA] [GO:0042597 "periplasmic space"
evidence=IEA] InterPro:IPR001188 PIRSF:PIRSF019574 PRINTS:PR00909
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0042597 eggNOG:COG0687 GO:GO:0019808
GO:GO:0015594 EMBL:M93239 PIR:F64823 RefSeq:NP_415375.1
RefSeq:YP_489127.1 PDB:1A99 PDBsum:1A99 ProteinModelPortal:P31133
SMR:P31133 DIP:DIP-10531N IntAct:P31133 TCDB:3.A.1.11.2
SWISS-2DPAGE:P31133 PRIDE:P31133 EnsemblBacteria:EBESCT00000000165
EnsemblBacteria:EBESCT00000000166 EnsemblBacteria:EBESCT00000016488
GeneID:12931000 GeneID:945480 KEGG:ecj:Y75_p0827 KEGG:eco:b0854
PATRIC:32116913 EchoBASE:EB1586 EcoGene:EG11629
HOGENOM:HOG000263815 KO:K11073 OMA:HPAEAHA ProtClustDB:PRK10682
BioCyc:EcoCyc:POTF-MONOMER BioCyc:ECOL316407:JW0838-MONOMER
EvolutionaryTrace:P31133 Genevestigator:P31133 Uniprot:P31133
Length = 370
Score = 103 (41.3 bits), Expect = 0.00074, P = 0.00074
Identities = 35/147 (23%), Positives = 63/147 (42%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWF----KCL 65
+F++ + K+ A S + DLV +L + + +P+ + +W + L
Sbjct: 61 VFDSNEVLEGKLMAGSTGF---DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELL 117
Query: 66 SHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----I 118
K +A PY W I Y K + + AP++ W + +PE + +
Sbjct: 118 KLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGV 177
Query: 119 SMVNSPREVIGSVLKYMGASYNSNNID 145
S +++P EV +VL Y+G NS D
Sbjct: 178 SFLDAPEEVFATVLNYLGKDPNSTKAD 204
>UNIPROTKB|P0AFK9 [details] [associations]
symbol:potD "putrescine / spermidine ABC transporter -
periplasmic binding protein" species:83333 "Escherichia coli K-12"
[GO:0019808 "polyamine binding" evidence=IEA] [GO:0015846
"polyamine transport" evidence=IEA;IMP] [GO:0015417
"polyamine-transporting ATPase activity" evidence=IMP]
InterPro:IPR001188 PIRSF:PIRSF019574 PRINTS:PR00909 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0042597 eggNOG:COG0687 KO:K11069 GO:GO:0019808 GO:GO:0015417
EMBL:M64519 TCDB:3.A.1.11.1 PIR:D40840 RefSeq:NP_415641.1
RefSeq:YP_489391.1 PDB:1POT PDB:1POY PDBsum:1POT PDBsum:1POY
ProteinModelPortal:P0AFK9 SMR:P0AFK9 IntAct:P0AFK9
SWISS-2DPAGE:P0AFK9 PaxDb:P0AFK9 PRIDE:P0AFK9
EnsemblBacteria:EBESCT00000003763 EnsemblBacteria:EBESCT00000015138
GeneID:12932803 GeneID:945682 KEGG:ecj:Y75_p1093 KEGG:eco:b1123
PATRIC:32117493 EchoBASE:EB0745 EcoGene:EG10752
HOGENOM:HOG000263814 OMA:VWNGSAY ProtClustDB:PRK09501
BioCyc:EcoCyc:POTD-MONOMER BioCyc:ECOL316407:JW1109-MONOMER
EvolutionaryTrace:P0AFK9 Genevestigator:P0AFK9 Uniprot:P0AFK9
Length = 348
Score = 102 (41.0 bits), Expect = 0.00093, P = 0.00093
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WGA I D + W DLW+PE G + + + REV L+ +G
Sbjct: 125 YSIPYIWGATAIGVNGDAV---DPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLG 181
Query: 137 ASYNSNNID 145
Y+ N D
Sbjct: 182 --YSGNTTD 188
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.430 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 165 152 0.00073 105 3 11 22 0.48 31
30 0.40 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 603 (64 KB)
Total size of DFA: 168 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.16u 0.11s 14.27t Elapsed: 00:00:01
Total cpu time: 14.16u 0.11s 14.27t Elapsed: 00:00:01
Start: Sat May 11 16:22:54 2013 End: Sat May 11 16:22:55 2013