BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040874
(165 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224074577|ref|XP_002304393.1| predicted protein [Populus trichocarpa]
gi|222841825|gb|EEE79372.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/173 (64%), Positives = 132/173 (76%), Gaps = 11/173 (6%)
Query: 4 CASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFK 63
S++ IF+++S FNK S +A+D+VSVGD WLSFAI+ +IEP+ G E+QDWFK
Sbjct: 58 LGSLENIFSDISASFNKRNIGPMSTVASDIVSVGDSWLSFAIKNAIIEPVRGVEEQDWFK 117
Query: 64 CLSHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP 112
LS KWK G+IWAAPYRWG+M+IAYKKSKF++H LAPIEDW DLWRP
Sbjct: 118 GLSDKWKVYLRRNHEGEIDPEGEIWAAPYRWGSMVIAYKKSKFQEHKLAPIEDWADLWRP 177
Query: 113 ELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
ELAGRISMV+SPREV+GSVLKYMGASYN+ NID QV GGK AVQQNLALL Q
Sbjct: 178 ELAGRISMVDSPREVVGSVLKYMGASYNTKNIDLQVPGGKNAVQQNLALLGKQ 230
>gi|225427562|ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242504 [Vitis vinifera]
gi|296085502|emb|CBI29234.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 130/175 (74%), Gaps = 11/175 (6%)
Query: 2 NLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW 61
N S+ IF+ L P +K K + S +AAD+V+VGD WL AI K +IEPI G EDQDW
Sbjct: 186 NFRGSLQDIFSELCRPLSKGKIEPKSALAADIVTVGDSWLDLAINKGIIEPIQGVEDQDW 245
Query: 62 FKCLSHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW 110
F+ LS+KWK GKIWAAPYRWG+M+IAYKKSKF KH LAPIEDW DLW
Sbjct: 246 FRGLSYKWKVYLRRNSKGELDAEGKIWAAPYRWGSMVIAYKKSKFEKHKLAPIEDWADLW 305
Query: 111 RPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
RPELAGRISM++SPREV+G+VLKYMGASYN++NI+ QV GG+ AVQQNL LL Q
Sbjct: 306 RPELAGRISMIDSPREVVGAVLKYMGASYNTDNIELQVNGGRNAVQQNLMLLAKQ 360
>gi|147822062|emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera]
Length = 875
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 130/189 (68%), Gaps = 25/189 (13%)
Query: 2 NLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW 61
N S+ IF+ L P +K K + S +AAD+V+VGD WL AI K +IEPI G EDQDW
Sbjct: 494 NFRGSLQDIFSELCRPLSKGKIEPKSALAADIVTVGDSWLDLAINKGIIEPIQGVEDQDW 553
Query: 62 FKCLSHKWK-------------------------RTRGKIWAAPYRWGAMMIAYKKSKFR 96
F+ LS+KWK GKIWAAPYRWG+M+IAYKKSKF
Sbjct: 554 FRGLSYKWKGYFKFDTDWFRSFYVIFKRNSKGELDAEGKIWAAPYRWGSMVIAYKKSKFE 613
Query: 97 KHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQ 156
KH LAPIEDW DLWRPELAGRISM++SPREV+G+VLKYMGASYN++NI+ QV GG+ AVQ
Sbjct: 614 KHKLAPIEDWADLWRPELAGRISMIDSPREVVGAVLKYMGASYNTDNIELQVNGGRNAVQ 673
Query: 157 QNLALLQNQ 165
QNL LL Q
Sbjct: 674 QNLMLLAKQ 682
>gi|356559069|ref|XP_003547824.1| PREDICTED: uncharacterized protein LOC100781794 [Glycine max]
Length = 552
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 131/172 (76%), Gaps = 11/172 (6%)
Query: 5 ASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC 64
AS++ IF++LS+PF K K AS +AAD+V +GD W+ FAI K +IEPI EDQ+WFK
Sbjct: 188 ASLENIFSDLSIPFTKGKIGPASALAADIVGIGDSWVKFAINKAIIEPIRDVEDQEWFKS 247
Query: 65 LSHKWK----RTR-------GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE 113
L KWK R R G IWAAPYRWG M+IAYK +KF+KH LAP+EDW DLWRP+
Sbjct: 248 LDDKWKVYLRRNREGEMDPKGDIWAAPYRWGCMVIAYKTNKFQKHKLAPVEDWADLWRPD 307
Query: 114 LAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
LAGRISMV+SPREVIG+VLKYMGASYN+N+I+ +V GG+ AV+ NLALL Q
Sbjct: 308 LAGRISMVDSPREVIGAVLKYMGASYNTNDINMEVNGGRDAVKHNLALLAKQ 359
>gi|255557729|ref|XP_002519894.1| transporter, putative [Ricinus communis]
gi|223540940|gb|EEF42498.1| transporter, putative [Ricinus communis]
Length = 507
Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 133/180 (73%), Gaps = 17/180 (9%)
Query: 3 LCASIDGIFNNLSLPFN------KVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGG 56
L +D IF++LS+ F+ KV S+S AAD+VS+GD WLSFAI+K LIEPI G
Sbjct: 134 LVGGLDNIFSDLSMSFSNNNIKRKVNIGSSSVAAADIVSIGDSWLSFAIQKALIEPIRGV 193
Query: 57 EDQDWFKCLSHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIED 105
EDQDWFK LS KWK G+IW APYRWG+M+IAYKKSKF+K+ LAPIED
Sbjct: 194 EDQDWFKGLSDKWKVYLRRNCEGSIDPNGEIWGAPYRWGSMVIAYKKSKFQKNKLAPIED 253
Query: 106 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
W DLWRP+L GRISM++SPREV+G+VLKYMGASYN+ +I+ +V GGK AVQ+NLAL Q
Sbjct: 254 WADLWRPDLKGRISMIDSPREVVGAVLKYMGASYNAKDIELEVHGGKSAVQENLALFGKQ 313
>gi|449455671|ref|XP_004145575.1| PREDICTED: uncharacterized protein LOC101211357 [Cucumis sativus]
gi|449485058|ref|XP_004157059.1| PREDICTED: uncharacterized protein LOC101230567 [Cucumis sativus]
Length = 549
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 126/171 (73%), Gaps = 11/171 (6%)
Query: 6 SIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCL 65
S++ IF+ LS+P K K K +S M AD+VS+GD WL+FAI+K LIEPI EDQDW+ L
Sbjct: 182 SLESIFSELSVPVGKSKVKPSSIMVADVVSIGDSWLNFAIKKALIEPIQDVEDQDWYNNL 241
Query: 66 SHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPEL 114
S KWK GKIW+APYRWG M+IAY K KFRK++LAP+EDW DLW PEL
Sbjct: 242 STKWKVLLRRNSEGEIDPEGKIWSAPYRWGCMVIAYNKVKFRKNNLAPMEDWSDLWCPEL 301
Query: 115 AGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
GRISMV+SPREVIG+VLKYMGASYN+ NI SQ+ GG+ A+ QNL LL Q
Sbjct: 302 RGRISMVDSPREVIGAVLKYMGASYNTENISSQIPGGRDAIHQNLTLLAKQ 352
>gi|297846532|ref|XP_002891147.1| hypothetical protein ARALYDRAFT_473635 [Arabidopsis lyrata subsp.
lyrata]
gi|297336989|gb|EFH67406.1| hypothetical protein ARALYDRAFT_473635 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 129/172 (75%), Gaps = 11/172 (6%)
Query: 5 ASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC 64
A+++ IF +LS P K + SAS AAD++S+GD WL AI ++LIEP+ G EDQDW+K
Sbjct: 151 ANLEEIFFDLSKPTRKGQKGSASTAAADMISIGDSWLCHAIREKLIEPMKGIEDQDWYKG 210
Query: 65 LSHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE 113
LS KWK G+ WA PYRWG M+IAYKKSKF+ + LAPIEDW DLWRPE
Sbjct: 211 LSEKWKIYLCRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRPE 270
Query: 114 LAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
LAGRI+MVNSPREV+G+VLKYMGASYN+ ++DSQV GG++AV++NLA L Q
Sbjct: 271 LAGRIAMVNSPREVVGAVLKYMGASYNTTDLDSQVPGGRIAVEKNLASLMKQ 322
>gi|28393765|gb|AAO42292.1| unknown protein [Arabidopsis thaliana]
Length = 524
Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 129/171 (75%), Gaps = 11/171 (6%)
Query: 6 SIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCL 65
+++ IF +LS P K +AS AAD++S+GD WLSFAI+++LIEP+ G EDQDW+K L
Sbjct: 153 NLEEIFFDLSKPSKNGKKGAASTAAADMISIGDSWLSFAIKEKLIEPMKGIEDQDWYKGL 212
Query: 66 SHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPEL 114
S KWK G+ WA PYRWG M+IAYKKSKF+ + LAPIEDW DLWRPEL
Sbjct: 213 SDKWKIYLRRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRPEL 272
Query: 115 AGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
AGRI+MVNSPREV+G+VLKYM ASYN+ ++DSQV GG++AV++NLA L Q
Sbjct: 273 AGRIAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEENLASLMKQ 323
>gi|357517389|ref|XP_003628983.1| RING-H2 finger protein ATL5F [Medicago truncatula]
gi|355523005|gb|AET03459.1| RING-H2 finger protein ATL5F [Medicago truncatula]
Length = 786
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 127/172 (73%), Gaps = 11/172 (6%)
Query: 5 ASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC 64
A+++ IF++LS+PF K + +AAD+V +GD WL FA+EK +IEPI E Q+WFK
Sbjct: 188 ATLESIFSDLSIPFTKGDHVPTTALAADIVGIGDSWLKFAVEKAIIEPIKDVEGQEWFKN 247
Query: 65 LSHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE 113
L+ KWK G IWAAPYRWG M+IAYK + F+KH LAPIEDW DLWRP+
Sbjct: 248 LAEKWKVYLRRNCEGEVDPEGDIWAAPYRWGCMVIAYKTNSFQKHKLAPIEDWADLWRPD 307
Query: 114 LAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
LAGRISMV+SPREV+G+VLKYMGASYN+N+I+ +V GG+ AV+ NLALL Q
Sbjct: 308 LAGRISMVDSPREVVGAVLKYMGASYNANDINLEVNGGRDAVKHNLALLAKQ 359
>gi|30692516|ref|NP_174426.2| putrescine-binding periplasmic protein-like protein [Arabidopsis
thaliana]
gi|51536594|gb|AAU05535.1| At1g31410 [Arabidopsis thaliana]
gi|332193231|gb|AEE31352.1| putrescine-binding periplasmic protein-like protein [Arabidopsis
thaliana]
Length = 524
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 129/171 (75%), Gaps = 11/171 (6%)
Query: 6 SIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCL 65
+++ IF +LS P K +AS AAD++S+GD WLSFAI+++LIEP+ G EDQDW+K L
Sbjct: 153 NLEEIFFDLSKPSKNGKKGAASTAAADMISIGDSWLSFAIKEKLIEPMKGIEDQDWYKGL 212
Query: 66 SHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPEL 114
S KWK G+ WA PYRWG M+IAYKKSKF+ + LAPIEDW DLWRPEL
Sbjct: 213 SDKWKIYLRRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRPEL 272
Query: 115 AGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
AGRI+MVNSPREV+G+VLKYM ASYN+ ++DSQV GG++AV++NLA L Q
Sbjct: 273 AGRIAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEKNLASLMKQ 323
>gi|12322546|gb|AAG51275.1|AC027135_16 hypothetical protein [Arabidopsis thaliana]
Length = 526
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 129/173 (74%), Gaps = 13/173 (7%)
Query: 6 SIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCL 65
+++ IF +LS P K +AS AAD++S+GD WLSFAI+++LIEP+ G EDQDW+K L
Sbjct: 153 NLEEIFFDLSKPSKNGKKGAASTAAADMISIGDSWLSFAIKEKLIEPMKGIEDQDWYKGL 212
Query: 66 SHKWKR-------------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP 112
S KWK G+ WA PYRWG M+IAYKKSKF+ + LAPIEDW DLWRP
Sbjct: 213 SDKWKSQIYLRRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRP 272
Query: 113 ELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
ELAGRI+MVNSPREV+G+VLKYM ASYN+ ++DSQV GG++AV++NLA L Q
Sbjct: 273 ELAGRIAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEKNLASLMKQ 325
>gi|356560607|ref|XP_003548582.1| PREDICTED: uncharacterized protein LOC100809061 [Glycine max]
Length = 508
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 11/172 (6%)
Query: 5 ASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC 64
AS++ +F++ S+PF K K AS +AAD+V +GD WL FAI K +IEPI EDQ+WFK
Sbjct: 144 ASLENMFSDPSIPFTKGKIGPASALAADIVGIGDSWLKFAINKGIIEPIRDVEDQEWFKS 203
Query: 65 LSHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE 113
L KWK +G IWA+PYRWG M+IAYK +KF+KH LAP+EDW DLWRP+
Sbjct: 204 LDDKWKVYLRRNCEGEIDPKGDIWASPYRWGCMVIAYKTNKFQKHKLAPVEDWADLWRPD 263
Query: 114 LAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
LAGRI MV+SPREV+G+VLKYMGASYN+N+I+++V GG+ V+ NLALL Q
Sbjct: 264 LAGRILMVDSPREVVGAVLKYMGASYNTNDINAEVNGGRDVVKHNLALLAKQ 315
>gi|115460340|ref|NP_001053770.1| Os04g0602200 [Oryza sativa Japonica Group]
gi|113565341|dbj|BAF15684.1| Os04g0602200, partial [Oryza sativa Japonica Group]
Length = 367
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 130/172 (75%), Gaps = 11/172 (6%)
Query: 5 ASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC 64
++D +++ +S +K + K S MAAD+VS+GD WL +AI K L+EP+ E+QDWF+
Sbjct: 8 TNLDVLYSEMSQCLDKGQLKQKSAMAADVVSIGDSWLGYAIRKGLVEPVKNAEEQDWFQS 67
Query: 65 LSHKWK----RTR-------GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE 113
LS++WK R R G IWA PYRWG ++IAYKK+KF++H+L PI+DW DLWRPE
Sbjct: 68 LSNRWKIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPE 127
Query: 114 LAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
LAG+ISMV+SPREVIG+VLK++G+SYN+N+++S++ GG+ V ++L LQNQ
Sbjct: 128 LAGKISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQ 179
>gi|218195504|gb|EEC77931.1| hypothetical protein OsI_17268 [Oryza sativa Indica Group]
gi|222629488|gb|EEE61620.1| hypothetical protein OsJ_16044 [Oryza sativa Japonica Group]
Length = 537
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 130/172 (75%), Gaps = 11/172 (6%)
Query: 5 ASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC 64
++D +++ +S +K + K S MAAD+VS+GD WL +AI K L+EP+ E+QDWF+
Sbjct: 178 TNLDVLYSEMSQCLDKGQLKQKSAMAADVVSIGDSWLGYAIRKGLVEPVKNAEEQDWFQS 237
Query: 65 LSHKWK----RTR-------GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE 113
LS++WK R R G IWA PYRWG ++IAYKK+KF++H+L PI+DW DLWRPE
Sbjct: 238 LSNRWKIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPE 297
Query: 114 LAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
LAG+ISMV+SPREVIG+VLK++G+SYN+N+++S++ GG+ V ++L LQNQ
Sbjct: 298 LAGKISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQ 349
>gi|38344144|emb|CAE01823.2| OSJNBa0041A02.11 [Oryza sativa Japonica Group]
Length = 422
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 130/172 (75%), Gaps = 11/172 (6%)
Query: 5 ASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC 64
++D +++ +S +K + K S MAAD+VS+GD WL +AI K L+EP+ E+QDWF+
Sbjct: 63 TNLDVLYSEMSQCLDKGQLKQKSAMAADVVSIGDSWLGYAIRKGLVEPVKNAEEQDWFQS 122
Query: 65 LSHKWK----RTR-------GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE 113
LS++WK R R G IWA PYRWG ++IAYKK+KF++H+L PI+DW DLWRPE
Sbjct: 123 LSNRWKIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPE 182
Query: 114 LAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
LAG+ISMV+SPREVIG+VLK++G+SYN+N+++S++ GG+ V ++L LQNQ
Sbjct: 183 LAGKISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQ 234
>gi|116310926|emb|CAH67864.1| B0403H10-OSIGBa0105A11.16 [Oryza sativa Indica Group]
Length = 537
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 130/172 (75%), Gaps = 11/172 (6%)
Query: 5 ASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC 64
++D +++ +S +K + K S MAAD+VS+GD WL +AI K L+EP+ E+QDWF+
Sbjct: 178 TNLDVLYSEMSQCLDKGQLKQKSAMAADVVSIGDSWLGYAIRKGLVEPVKNAEEQDWFQS 237
Query: 65 LSHKWK----RTR-------GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE 113
LS++WK R R G IWA PYRWG ++IAYKK+KF++H+L PI+DW DLWRPE
Sbjct: 238 LSNRWKIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPE 297
Query: 114 LAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
LAG+ISMV+SPREVIG+VLK++G+SYN+N+++S++ GG+ V ++L LQNQ
Sbjct: 298 LAGKISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQ 349
>gi|226510377|ref|NP_001146059.1| uncharacterized protein LOC100279590 [Zea mays]
gi|219885513|gb|ACL53131.1| unknown [Zea mays]
gi|413919418|gb|AFW59350.1| putative putrescine-binding domain family protein [Zea mays]
Length = 530
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 123/175 (70%), Gaps = 11/175 (6%)
Query: 2 NLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW 61
L A++DGIF+ +S +K + + S MAAD+VS+GD WL +AI K L+EPI E+QDW
Sbjct: 168 ELRANLDGIFSEMSQCMDKGQVQPKSAMAADVVSLGDSWLGYAIRKGLLEPIKNAEEQDW 227
Query: 62 FKCLSHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW 110
F LS +WK G IW PYRWG M+IAYKK KF++H+L PI+DW+DLW
Sbjct: 228 FHSLSDRWKVHLCRNQNGEADPNGTIWGVPYRWGTMVIAYKKDKFKRHNLKPIQDWEDLW 287
Query: 111 RPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
RPELAGRISMV+SPREVIG+VLK++G+SYN+ +++ V GG+ AV + LQ Q
Sbjct: 288 RPELAGRISMVDSPREVIGAVLKHLGSSYNTVDMEMDVNGGRAAVLNSFTQLQKQ 342
>gi|357165613|ref|XP_003580439.1| PREDICTED: uncharacterized protein LOC100830894 [Brachypodium
distachyon]
Length = 526
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 125/172 (72%), Gaps = 11/172 (6%)
Query: 5 ASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC 64
SID +F LS K + +S S MAAD+VS+GD WL +AI K L+EPI E+QDW++
Sbjct: 167 TSIDTLFTELSQCVEKGEVQSKSAMAADVVSIGDSWLGYAIRKGLVEPIKNAEEQDWYRS 226
Query: 65 LSHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE 113
LS +WK + G +W APYRWG ++IAYKKSKF++H+L PI+DW+DLWRPE
Sbjct: 227 LSDRWKVHLRRNQNGEADSNGSVWGAPYRWGTVVIAYKKSKFKQHNLKPIQDWEDLWRPE 286
Query: 114 LAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
LAG+ISMV+SPREVIG+VLK +G+SYN+ +++++V+GG+ A+ + LQ Q
Sbjct: 287 LAGKISMVDSPREVIGAVLKRLGSSYNTIDMETEVSGGREAILNSFVQLQKQ 338
>gi|326516630|dbj|BAJ92470.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518394|dbj|BAJ88226.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519014|dbj|BAJ92667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520335|dbj|BAK07426.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326524998|dbj|BAK04435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 125/171 (73%), Gaps = 11/171 (6%)
Query: 6 SIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCL 65
SID +F+ LS +K + + S MAADLVS+GD WL +AI K L+EPI+ E+QDW++ L
Sbjct: 173 SIDALFSELSKCVDKGQVQPKSAMAADLVSIGDSWLGYAIRKGLVEPISNAEEQDWYRSL 232
Query: 66 SHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPEL 114
S +WK + G +W PYRWG ++IAYKKSKF++H+L PI+DW+DLWRPEL
Sbjct: 233 SDRWKVHLCRNQNGEADSSGSVWGVPYRWGTVVIAYKKSKFKQHNLKPIQDWEDLWRPEL 292
Query: 115 AGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
AG+ISMV+SPREVIG+VLK +G+SYN+ +++++V GG+ AV + LQ Q
Sbjct: 293 AGKISMVDSPREVIGAVLKQLGSSYNTIDMETEVNGGREAVLNSFTQLQKQ 343
>gi|242077052|ref|XP_002448462.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
gi|241939645|gb|EES12790.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
Length = 531
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/175 (50%), Positives = 124/175 (70%), Gaps = 11/175 (6%)
Query: 2 NLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW 61
L A++DGIF+ +S +K + + S MAAD V++GD WL +AI + L+EP+ E+QDW
Sbjct: 169 ELRANLDGIFSEMSQCMDKGQVQPKSAMAADAVTLGDSWLGYAIRQGLLEPVKNAEEQDW 228
Query: 62 FKCLSHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW 110
F+ LS +WK G IW PYRWG M+IAYKK+KF++H+L PI+DW+DLW
Sbjct: 229 FRSLSDRWKVHLCRNQNGEADPNGTIWGVPYRWGTMVIAYKKNKFKRHNLKPIQDWEDLW 288
Query: 111 RPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
RPELAGRISMV+SPRE+IG+VLK++G+SYN+ +++ V GG+ AV + LQ Q
Sbjct: 289 RPELAGRISMVDSPREIIGAVLKHLGSSYNTVDMEIDVNGGREAVLNSFTQLQKQ 343
>gi|168015953|ref|XP_001760514.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688211|gb|EDQ74589.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 438
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 111/172 (64%), Gaps = 11/172 (6%)
Query: 5 ASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC 64
S+ I L++ + S MAADLV+VGD WL+ A++ L++PI E DWF
Sbjct: 58 GSLSDILAELAVSMENSQITPKSAMAADLVTVGDSWLATAVQGGLLDPIRNAEQFDWFNR 117
Query: 65 LSHKWKR-----------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE 113
L KW+ +G +W PYRWG+++ A+KK K ++ ++PI DWKDL++P+
Sbjct: 118 LHPKWQNFIRRDPEGIINPQGLVWGVPYRWGSLVFAFKKDKLERNGISPIRDWKDLFQPQ 177
Query: 114 LAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
LAGRI+MV+SPREV+G+VLK +GASYN+N+ D+ V GG+ AV++ LQ Q
Sbjct: 178 LAGRIAMVDSPREVVGAVLKSLGASYNTNDFDADVPGGREAVKERFLALQKQ 229
>gi|302820071|ref|XP_002991704.1| hypothetical protein SELMODRAFT_133925 [Selaginella moellendorffii]
gi|300140553|gb|EFJ07275.1| hypothetical protein SELMODRAFT_133925 [Selaginella moellendorffii]
Length = 387
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 107/175 (61%), Gaps = 11/175 (6%)
Query: 2 NLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW 61
S+D I+ L N + S S MAAD+V++GD WL AI +LI + ++ +W
Sbjct: 53 EFLGSLDTIYTQLVSAKNSGQLTSKSTMAADVVTLGDSWLGVAIRNKLIASVGKPQELEW 112
Query: 62 FKCLSHKWKRT-----------RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW 110
F+ L KW+ G++W APYR G M+IAY+K K K L I+DW DLW
Sbjct: 113 FQHLDPKWQAILRRDAQGRPDETGQVWGAPYRCGCMVIAYRKDKLAKAGLQDIKDWDDLW 172
Query: 111 RPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
+PELAGRISM+ S REV+G VLK +GASYN+ N+D++V GG+ AV++ L+ Q
Sbjct: 173 KPELAGRISMIESTREVVGLVLKSLGASYNARNLDAEVHGGQEAVKERFLRLRKQ 227
>gi|302818713|ref|XP_002991029.1| hypothetical protein SELMODRAFT_132900 [Selaginella moellendorffii]
gi|300141123|gb|EFJ07837.1| hypothetical protein SELMODRAFT_132900 [Selaginella moellendorffii]
Length = 387
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 107/175 (61%), Gaps = 11/175 (6%)
Query: 2 NLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW 61
S+D I+ L N + S S MAAD+V++GD WL AI +LI + ++ +W
Sbjct: 53 EFLGSLDTIYTQLVSAKNSGQLTSKSTMAADVVTLGDSWLGAAIRNKLIASVGKPQELEW 112
Query: 62 FKCLSHKWKRT-----------RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW 110
F+ L KW+ G++W APYR G M+IAY+K K K L I+DW DLW
Sbjct: 113 FQHLDPKWQAILRRDAQGRPDETGQVWGAPYRCGCMVIAYRKDKLAKAGLQDIKDWDDLW 172
Query: 111 RPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
+PELAG+ISM+ S REV+G VLK +GASYN+ N+D++V GG+ AV++ L+ Q
Sbjct: 173 KPELAGKISMIESTREVVGLVLKSLGASYNARNLDAEVHGGQEAVKERFLRLRKQ 227
>gi|354567783|ref|ZP_08986951.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
gi|353542241|gb|EHC11705.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
Length = 382
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 88/142 (61%), Gaps = 13/142 (9%)
Query: 16 LPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR---- 71
L FN S ADLV++GD WL +IEK+LI+P+ + + W L +W+
Sbjct: 87 LRFNLPFGSSQKPNIADLVTLGDYWLKTSIEKKLIQPLEVEQLKQW-AVLPQRWRELVTR 145
Query: 72 -------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSP 124
T+GK+WAAPYRWG+ +I Y++ KF++ P DW DLWR EL RIS++N P
Sbjct: 146 NEQGFLDTQGKVWAAPYRWGSTVIVYRRDKFQQLGWTPT-DWSDLWRTELRDRISLLNHP 204
Query: 125 REVIGSVLKYMGASYNSNNIDS 146
REVIG VLK +G SYN+ N+D+
Sbjct: 205 REVIGLVLKKLGKSYNTENLDA 226
>gi|440681216|ref|YP_007156011.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
gi|428678335|gb|AFZ57101.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
Length = 383
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 88/141 (62%), Gaps = 17/141 (12%)
Query: 16 LPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR---- 71
+PFN+ + S S DLV++GD WL AIE++LI+P+ + + W L KW++
Sbjct: 90 IPFNQSQTTSKS----DLVTLGDYWLKAAIEQKLIQPLQTEKIKQW-PVLEQKWQQLVTR 144
Query: 72 -------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSP 124
+G++W APYRWG +I Y + KF+K D P +DW DLWR EL IS++N P
Sbjct: 145 DKQGNVNPQGQVWGAPYRWGNTVIVYNREKFQKLDWQP-KDWSDLWRSELRSHISLLNHP 203
Query: 125 REVIGSVLKYMGASYNSNNID 145
RE+IG VLK +G SYN+ N+D
Sbjct: 204 REIIGLVLKKLGQSYNTENLD 224
>gi|434405536|ref|YP_007148421.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
gi|428259791|gb|AFZ25741.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
Length = 382
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 81/126 (64%), Gaps = 13/126 (10%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWAA 79
ADLV++GD WL AIE++LI+P+ + + W L KW++ +GK+W A
Sbjct: 102 ADLVTLGDYWLKAAIEQKLIQPLEVEQVKQW-SVLDQKWQKLVQRDDLGNLNPQGKVWGA 160
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG+ +I Y + KF K D P DW DLWR EL RIS++N PREVIG VLK +G SY
Sbjct: 161 PYRWGSTVIVYNREKFEKLDWRP-RDWNDLWRDELQQRISLLNQPREVIGLVLKKLGKSY 219
Query: 140 NSNNID 145
N+ N+D
Sbjct: 220 NTENLD 225
>gi|427734714|ref|YP_007054258.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
gi|427369755|gb|AFY53711.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
Length = 388
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 83/126 (65%), Gaps = 13/126 (10%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWAAP 80
DL+++GD WL AIEK LI+ ++ + Q+W LS KW+ +G+IWAAP
Sbjct: 103 DLLTLGDFWLQEAIEKELIQSLSREDLQNW-SNLSPKWQDLVTRNNQGLVDKQGQIWAAP 161
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
YRWG+ +I Y+K K +K D IEDW DLWR EL GRIS++N PREVIG LK +G SYN
Sbjct: 162 YRWGSTVIIYRKDKLKKFDWK-IEDWSDLWREELKGRISLLNQPREVIGLTLKKLGKSYN 220
Query: 141 SNNIDS 146
S N+ S
Sbjct: 221 SENLQS 226
>gi|75909270|ref|YP_323566.1| periplasmic polyamine-binding protein of ABC transporter [Anabaena
variabilis ATCC 29413]
gi|75702995|gb|ABA22671.1| periplasmic polyamine-binding protein of ABC transporter [Anabaena
variabilis ATCC 29413]
Length = 388
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 88/140 (62%), Gaps = 17/140 (12%)
Query: 16 LPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR---- 71
+PF + S ++ ADLV++GD WL+ AIE++LI+PI + + W L +W+
Sbjct: 97 IPFRQ----SQTFPLADLVTLGDYWLTTAIERKLIQPIETAQLKQW-SGLDSRWRELVTR 151
Query: 72 -------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSP 124
+GK+WAAPYRWG+ +I Y + KF+K P +DW DLWR EL RIS+++ P
Sbjct: 152 NEQGIPDPQGKVWAAPYRWGSTVIVYDREKFKKLGWTP-QDWSDLWRNELRSRISLLDQP 210
Query: 125 REVIGSVLKYMGASYNSNNI 144
REVIG VLK +G SYN N+
Sbjct: 211 REVIGLVLKKLGKSYNIENL 230
>gi|298492009|ref|YP_003722186.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
0708]
gi|298233927|gb|ADI65063.1| extracellular solute-binding protein family 1 ['Nostoc azollae'
0708]
Length = 383
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 83/132 (62%), Gaps = 13/132 (9%)
Query: 24 KSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRT----------- 72
+S ADLV++GD WL AIE++LI+P+ + + W L+ +W++
Sbjct: 94 QSQQQSKADLVTLGDFWLKAAIEQKLIQPLETEKIKQWL-SLNLRWQQLVRRDDQGNIDP 152
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+GKIWAAPY WG +I Y KF+K D P +DW DLWR EL RIS++N PREVIG VL
Sbjct: 153 QGKIWAAPYHWGNTVIIYNGEKFQKFDWQP-KDWSDLWRSELRSRISLLNHPREVIGLVL 211
Query: 133 KYMGASYNSNNI 144
K +G SYN+ NI
Sbjct: 212 KKLGESYNTENI 223
>gi|17227795|ref|NP_484343.1| periplasmic polyamine-binding protein of ABC transporter [Nostoc
sp. PCC 7120]
gi|17135277|dbj|BAB77823.1| periplasmic polyamine-binding protein of ABC transporter [Nostoc
sp. PCC 7120]
Length = 388
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 88/140 (62%), Gaps = 17/140 (12%)
Query: 16 LPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR---- 71
+PF + S ++ ADLV++GD WL+ AIE++LI+ I + + W L +W+
Sbjct: 97 IPFRQ----SQTFPVADLVTLGDYWLTTAIERKLIQAIETEQLKQW-SGLDSRWRELVTR 151
Query: 72 -------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSP 124
+GK+WAAPYRWG+ +I Y + KF+K P +DW DLWR EL RIS+++ P
Sbjct: 152 NEQGVPDPQGKVWAAPYRWGSTVIVYDREKFKKLGWIP-QDWSDLWRSELRSRISVLDQP 210
Query: 125 REVIGSVLKYMGASYNSNNI 144
RE+IG VLK +G SYN+ N+
Sbjct: 211 REIIGLVLKKLGKSYNTENL 230
>gi|427717210|ref|YP_007065204.1| extracellular solute-binding protein [Calothrix sp. PCC 7507]
gi|427349646|gb|AFY32370.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
7507]
Length = 376
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 87/141 (61%), Gaps = 17/141 (12%)
Query: 16 LPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR---- 71
+PF +S + AA+LV++GD WL AIE++LI+P+ + + W L +W +
Sbjct: 85 IPF----GQSQNSPAANLVTLGDYWLKAAIEQKLIQPLEVKQVKQW-SALDERWHKLVTR 139
Query: 72 -------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSP 124
+GK+WAAPYRWG+ +I Y + KF++ P DW DLWR E+ RIS++N P
Sbjct: 140 NDQGILDAQGKVWAAPYRWGSTVIVYNRDKFKELGWTP-SDWGDLWREEVRSRISLLNQP 198
Query: 125 REVIGSVLKYMGASYNSNNID 145
REVIG LK +G SYN+ N+D
Sbjct: 199 REVIGLTLKKLGKSYNTENLD 219
>gi|414075874|ref|YP_006995192.1| solute-binding protein [Anabaena sp. 90]
gi|413969290|gb|AFW93379.1| solute-binding protein [Anabaena sp. 90]
Length = 376
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 92/146 (63%), Gaps = 12/146 (8%)
Query: 16 LPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR---- 71
LPFN+ KS + A+LV++GD WL AI+++LI+P+A ++ L+ KW++
Sbjct: 90 LPFNQ-NQKSPT---ANLVTLGDYWLQAAIDQKLIQPLATTNIKN-LANLNEKWQQLIKR 144
Query: 72 -TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGS 130
GKIW PYRWG +I Y + KF++ P DW DLWR EL RIS++N PREVIG
Sbjct: 145 DQEGKIWGVPYRWGNTVIIYNQEKFQELGWKPT-DWSDLWRSELQNRISLLNHPREVIGL 203
Query: 131 VLKYMGASYNSNNIDSQVAGGKVAVQ 156
VLK +G SYN+ NI Q++ K +Q
Sbjct: 204 VLKKLGKSYNTENI-KQISALKPELQ 228
>gi|428775058|ref|YP_007166845.1| periplasmic polyamine-binding protein [Halothece sp. PCC 7418]
gi|428689337|gb|AFZ42631.1| periplasmic polyamine-binding protein [Halothece sp. PCC 7418]
Length = 372
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 83/137 (60%), Gaps = 13/137 (9%)
Query: 30 AADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWA 78
A+LV++GD WL AI + LI+P+ +W K L W+R GKIW
Sbjct: 83 TANLVTLGDIWLEEAIAENLIQPLDLTSVDNWRK-LPSVWQRLVQRDAQGNLAPNGKIWG 141
Query: 79 APYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS 138
APYRWG +IAY+ +FR+ PI DWKDLWR EL R+S++N PREVIG LK +G S
Sbjct: 142 APYRWGNTVIAYRADQFREAGYEPITDWKDLWREELRDRVSLLNQPREVIGFTLKKLGQS 201
Query: 139 YNSNNIDSQVAGGKVAV 155
YN+++++ QV K +
Sbjct: 202 YNTSDLE-QVPNLKTEL 217
>gi|427706446|ref|YP_007048823.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
gi|427358951|gb|AFY41673.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
Length = 386
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 84/135 (62%), Gaps = 14/135 (10%)
Query: 25 SASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQ--DWFKCLSHKWKR----------- 71
S + DLVS+GD WL AIE++LI+P+ E Q ++ L +W++
Sbjct: 96 SQTTTVVDLVSLGDYWLKSAIEQKLIQPLEAAEVQKLQYWSKLDERWRQLVTRNDQGILD 155
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
+GK+WAAPYRWG+ +I Y + KFR+ P +DW DLWR L IS++++PREVIG V
Sbjct: 156 PQGKVWAAPYRWGSTVIVYDRHKFRELGWQP-QDWSDLWRDGLRSHISLLDNPREVIGLV 214
Query: 132 LKYMGASYNSNNIDS 146
LK G SYN+ N+D+
Sbjct: 215 LKKFGKSYNTENLDT 229
>gi|428778824|ref|YP_007170610.1| spermidine/putrescine-binding periplasmic protein [Dactylococcopsis
salina PCC 8305]
gi|428693103|gb|AFZ49253.1| spermidine/putrescine-binding periplasmic protein [Dactylococcopsis
salina PCC 8305]
Length = 369
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 13/138 (9%)
Query: 30 AADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWA 78
A+LV++GD WL AI+K LI+P+ ++W + L W++ RGK+W
Sbjct: 83 TANLVTLGDIWLEKAIKKELIQPLTVNSLRNW-EMLPASWQKLVQRDRNGNLDARGKVWG 141
Query: 79 APYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS 138
PYRWG+ +IAY++ +FR+ P DW DLWR EL RIS++N PREVIG LK +G S
Sbjct: 142 IPYRWGSTVIAYREDRFRQAGYDPPTDWGDLWREELRDRISLLNQPREVIGLTLKKLGFS 201
Query: 139 YNSNNIDSQVAGGKVAVQ 156
YN+ ++DS ++ K A++
Sbjct: 202 YNTPDLDS-ISDLKTALK 218
>gi|427731993|ref|YP_007078230.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
gi|427367912|gb|AFY50633.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
Length = 382
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 88/142 (61%), Gaps = 17/142 (11%)
Query: 16 LPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR---- 71
+PF + S S A+LV++GD WL IE+RLI+P+ + + W + L +W++
Sbjct: 90 IPFRQ----SQSSAVANLVTLGDYWLKTVIEQRLIQPLEPAQLKQWTE-LDARWQQLVRR 144
Query: 72 -------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSP 124
+GK+WAAPYRWG+ +I Y + KF+ P +DW DLWR E+ R S+++ P
Sbjct: 145 NDQGFPDPQGKVWAAPYRWGSTVIVYNQDKFKDLGWMP-QDWSDLWREEMRSRFSLLDHP 203
Query: 125 REVIGSVLKYMGASYNSNNIDS 146
REVIG VLK +G SYN+ N+D+
Sbjct: 204 REVIGLVLKKLGKSYNTENLDA 225
>gi|186683650|ref|YP_001866846.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
gi|186466102|gb|ACC81903.1| extracellular solute-binding protein, family 1 [Nostoc punctiforme
PCC 73102]
Length = 385
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 81/129 (62%), Gaps = 16/129 (12%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIA---GGEDQDWFKCLSHKWKR-----------TRGKI 76
ADLV++GD WL AI ++LI+P+ G + + W L KWK+ T+GK+
Sbjct: 102 ADLVTLGDYWLKAAIGQKLIQPLQELQGNQLKQW-STLDEKWKKLVTRDDQGNLDTQGKV 160
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
W APYRWG +I Y + KFR+ P +DW DLWR + RIS++N PREVIG VLK +G
Sbjct: 161 WGAPYRWGTTVIVYNRDKFRELGWTP-KDWSDLWRDGMQQRISLLNQPREVIGLVLKKLG 219
Query: 137 ASYNSNNID 145
SYN+ N+D
Sbjct: 220 KSYNTENLD 228
>gi|428304513|ref|YP_007141338.1| extracellular solute-binding protein [Crinalium epipsammum PCC
9333]
gi|428246048|gb|AFZ11828.1| extracellular solute-binding protein family 1 [Crinalium epipsammum
PCC 9333]
Length = 391
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 88/145 (60%), Gaps = 17/145 (11%)
Query: 12 NNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR 71
N L +PF K DLV++GD WL AI+++LI+PIA + ++W + + +W+
Sbjct: 84 NKLKIPFLSPKQPEI----PDLVTLGDYWLESAIQQQLIQPIALDKLKNW-QQMPKQWQE 138
Query: 72 -----------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISM 120
GKIW APYRWG+ +IAY+K KF+ P +W DLWR E GRIS+
Sbjct: 139 LVQRNEQGQLDAAGKIWGAPYRWGSTVIAYRKDKFKSLGWTPT-NWSDLWREECKGRISL 197
Query: 121 VNSPREVIGSVLKYMGASYNSNNID 145
++ PRE+IG LK++G SYN+ N+D
Sbjct: 198 LDQPREIIGLTLKHLGYSYNTTNLD 222
>gi|218438983|ref|YP_002377312.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 7424]
gi|218171711|gb|ACK70444.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 7424]
Length = 384
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 76/126 (60%), Gaps = 13/126 (10%)
Query: 30 AADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRT-----------RGKIWA 78
ADLV++GD WL AIE++LI P+ E W + L +W+ +G+IW
Sbjct: 97 VADLVTLGDGWLKGAIEQQLISPLDINELSQWPQ-LPPRWQEIVQRNQLGMVDKQGQIWG 155
Query: 79 APYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS 138
APYRWG MI Y+ +K D P DW DLWR EL GRIS++N PREVIG LK +G S
Sbjct: 156 APYRWGTTMIVYRSDILKKFDWQPT-DWSDLWREELQGRISLLNQPREVIGLTLKKLGYS 214
Query: 139 YNSNNI 144
YN+ NI
Sbjct: 215 YNTQNI 220
>gi|434391078|ref|YP_007126025.1| periplasmic polyamine-binding protein of ABC transporter
[Gloeocapsa sp. PCC 7428]
gi|428262919|gb|AFZ28865.1| periplasmic polyamine-binding protein of ABC transporter
[Gloeocapsa sp. PCC 7428]
Length = 378
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 15/142 (10%)
Query: 15 SLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR--- 71
SLP +++S + + L+++GD WLS AI+++LI+P+ + Q+W L +W+
Sbjct: 84 SLPLPTRQSQSPN--PSTLITLGDYWLSTAIQQQLIQPLNITQLQNW-NALPSRWQELVR 140
Query: 72 --------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNS 123
+G+IWAAPYRWG+ +I Y + KF P DW DLWRPEL RIS+V+
Sbjct: 141 RNNQGESDPQGQIWAAPYRWGSTVILYNREKFNSLGWTP-NDWSDLWRPELRSRISIVDQ 199
Query: 124 PREVIGSVLKYMGASYNSNNID 145
REVIG LK +G SYN+ N+D
Sbjct: 200 SREVIGLTLKRLGQSYNAQNLD 221
>gi|113476419|ref|YP_722480.1| periplasmic polyamine-binding protein of ABC transporter
[Trichodesmium erythraeum IMS101]
gi|110167467|gb|ABG52007.1| periplasmic polyamine-binding protein of ABC transporter
[Trichodesmium erythraeum IMS101]
Length = 382
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 83/133 (62%), Gaps = 13/133 (9%)
Query: 24 KSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKW----KRT------- 72
K+ + A+LV++GD WL+ AI++ LI+P +W K L KW KR
Sbjct: 88 KTENINIANLVTLGDYWLANAIKQELIQPFNSQSLANWNK-LPEKWLELVKRNNQGYVDP 146
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+GKIWAAPY+WG +IAY+ KF+ P +DW DLWRPEL G IS++N REVIG L
Sbjct: 147 QGKIWAAPYQWGTTLIAYRVDKFKALGWEP-KDWSDLWRPELKGNISLLNQAREVIGLTL 205
Query: 133 KYMGASYNSNNID 145
K +G SYN+ NID
Sbjct: 206 KKLGKSYNTKNID 218
>gi|166363771|ref|YP_001656044.1| periplasmic polyamine-binding protein [Microcystis aeruginosa
NIES-843]
gi|166086144|dbj|BAG00852.1| periplasmic polyamine-binding protein [Microcystis aeruginosa
NIES-843]
Length = 382
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 99/167 (59%), Gaps = 22/167 (13%)
Query: 13 NLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-- 70
++S+PF + + +LV++GD WL AI LI+P+ + +W K L +W+
Sbjct: 86 SISIPF-----REQNPAMGNLVTLGDAWLGKAITNGLIQPLDTSQLSNWSK-LPPRWQEN 139
Query: 71 ---------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMV 121
+T GK+W APYRWG +IAY + KF + D P +DW DLWRPEL G+I+++
Sbjct: 140 MTRNAQGQPQTEGKVWGAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 122 NSPREVIGSVLKYMGASYNSNNIDSQVAGGK---VAVQQNLALLQNQ 165
++ REVIG LK MG SYNS+++ QV G K A+Q+ + +Q
Sbjct: 199 DNRREVIGLTLKKMGYSYNSSDL-KQVMGLKDQLFALQKQVKFYSSQ 244
>gi|359457473|ref|ZP_09246036.1| ABC transporter periplasmic solute-binding protein [Acaryochloris
sp. CCMEE 5410]
Length = 371
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 83/139 (59%), Gaps = 13/139 (9%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------- 71
K+ + + + L S+GD WL AI++ LI+P++ + W L+ +W++
Sbjct: 83 EKLPPEDKPKLPSRLASLGDYWLPQAIQQNLIQPLSVDDLNRW-SALAPQWQQLVRRDLQ 141
Query: 72 ----TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREV 127
T GKIW APYRWGA MIA++K KFR P +DW DLWR EL G IS+ + PREV
Sbjct: 142 GNPSTEGKIWGAPYRWGATMIAFRKDKFRDLGWQP-QDWSDLWRSELKGHISLPDQPREV 200
Query: 128 IGSVLKYMGASYNSNNIDS 146
IG LK +G SYN ++D+
Sbjct: 201 IGLTLKKLGQSYNLEDLDT 219
>gi|300869610|ref|ZP_07114190.1| Periplasmic polyamine-binding protein of ABC transporter
[Oscillatoria sp. PCC 6506]
gi|300332388|emb|CBN59390.1| Periplasmic polyamine-binding protein of ABC transporter
[Oscillatoria sp. PCC 6506]
Length = 349
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 80/126 (63%), Gaps = 12/126 (9%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWAA 79
ADLV +GD WL+ AI+++LI+P+ + +W + L W+ +GKIWAA
Sbjct: 60 ADLVMIGDYWLAKAIQQKLIQPLDPAKLTNWSQ-LPPAWQTLVRRNDSGIADEKGKIWAA 118
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +I Y+ KF+ L P DW DLWR EL RIS++++PREVIG LK +G SY
Sbjct: 119 PYRWGTTVIVYRIDKFKSLGLKPPTDWSDLWREELRDRISLLDNPREVIGLTLKKLGKSY 178
Query: 140 NSNNID 145
N+ +++
Sbjct: 179 NTRDLN 184
>gi|425439720|ref|ZP_18820036.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9717]
gi|389720001|emb|CCH96242.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9717]
Length = 382
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 97/164 (59%), Gaps = 23/164 (14%)
Query: 13 NLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-- 70
++S+PF + K +LV++GD WL AI LI+P+ + +W K L +W+
Sbjct: 86 SISIPFREQKPA-----IGNLVTLGDAWLGKAITNGLIQPLDTSQLSNWSK-LPPRWQEN 139
Query: 71 ---------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMV 121
+T GK+W APYRWG +IAY + KF + D P +DW DLWRPEL G+I+++
Sbjct: 140 MARNAQGQPQTEGKVWGAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 122 NSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
++ REVIG LK +G SYNS+++ QV A++ L LQ Q
Sbjct: 199 DNRREVIGLTLKKLGYSYNSSDL-KQV----TALKDQLFALQKQ 237
>gi|425443832|ref|ZP_18823896.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9443]
gi|389733602|emb|CCI02643.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9443]
Length = 382
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 85/133 (63%), Gaps = 14/133 (10%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-----------RTRGKIWAA 79
+LV++GD WL AI LI+P+ + +W K L +W+ +T GK+WAA
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWAA 157
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY + KF + D P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 140 NSNNIDSQVAGGK 152
NS+++ QV G K
Sbjct: 217 NSSDL-KQVMGLK 228
>gi|158338236|ref|YP_001519413.1| ABC transporter periplasmic solute-binding protein [Acaryochloris
marina MBIC11017]
gi|158308477|gb|ABW30094.1| ABC transporter, periplasmic solute-binding protein [Acaryochloris
marina MBIC11017]
Length = 371
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 83/139 (59%), Gaps = 13/139 (9%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------- 71
KV ++ + + L S+GD WL AI++ LI+P++ + W L+ +W++
Sbjct: 83 EKVPSEDQPKLPSRLASLGDYWLPQAIQQNLIQPLSADDLNRW-SALAPQWQQLVRRDLQ 141
Query: 72 ----TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREV 127
GKIW APYRWGA MIA++K KFR P +DW DLWR EL IS+++ PREV
Sbjct: 142 GNPSAEGKIWGAPYRWGATMIAFRKDKFRDLGWQP-QDWSDLWRSELKEHISLLDQPREV 200
Query: 128 IGSVLKYMGASYNSNNIDS 146
IG LK +G SYN ++D+
Sbjct: 201 IGLTLKKLGQSYNLEDLDT 219
>gi|422303925|ref|ZP_16391274.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9806]
gi|389791060|emb|CCI13120.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9806]
Length = 382
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 87/143 (60%), Gaps = 18/143 (12%)
Query: 13 NLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-- 70
+ +PF + K +LV++GD WL I LI+P+ + +W K L +W+
Sbjct: 86 SFPIPFREQKPA-----IGNLVTLGDAWLGKVITNGLIQPLDTSQLSNWSK-LPPRWQEN 139
Query: 71 ---------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMV 121
+T GK+WAAPYRWG +IAY + KF + D P +DW DLWRPEL+G+I+++
Sbjct: 140 MTRNAQGQPQTEGKVWAAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELSGKIALI 198
Query: 122 NSPREVIGSVLKYMGASYNSNNI 144
++ REVIG LK +G SYNS+N+
Sbjct: 199 DNRREVIGLTLKKLGYSYNSSNL 221
>gi|307153205|ref|YP_003888589.1| extracellular solute-binding protein [Cyanothece sp. PCC 7822]
gi|306983433|gb|ADN15314.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC
7822]
Length = 383
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 87/144 (60%), Gaps = 19/144 (13%)
Query: 13 NLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRT 72
N LPF + K A DLV++GD WL+ AIE++LI P+ G D W + L +W+
Sbjct: 84 NSGLPF--INKKPAP--VPDLVTLGDSWLATAIEQKLISPLEG--DLKW-QQLPPRWQEI 136
Query: 73 -----------RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMV 121
+GKIW APYRWG MIAY+K +K P +DW DLWR ++ RIS++
Sbjct: 137 VRRDEQGMVSQQGKIWGAPYRWGTTMIAYRKDNLKKLGWEP-KDWGDLWREDVRNRISLL 195
Query: 122 NSPREVIGSVLKYMGASYNSNNID 145
+ PREVIG LK +G SYNS+NI+
Sbjct: 196 DQPREVIGLTLKKLGYSYNSDNIN 219
>gi|428317919|ref|YP_007115801.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
gi|428241599|gb|AFZ07385.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
Length = 369
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 80/126 (63%), Gaps = 13/126 (10%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWAA 79
ADLV +GD WL+ AI ++LI+PI + +W + L +W++ +GK+WAA
Sbjct: 83 ADLVMLGDYWLTLAIRQKLIQPIDPAKFANWSQ-LPERWQKLVRRNDEGKLDPQGKVWAA 141
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG+ +IAY+ KF+ P DWKDLWR EL RIS+ +S REVIG LK +G SY
Sbjct: 142 PYRWGSTVIAYRTDKFKALGWTPT-DWKDLWRSELRDRISLPDSAREVIGLTLKKLGKSY 200
Query: 140 NSNNID 145
N+ +D
Sbjct: 201 NTQQLD 206
>gi|119512455|ref|ZP_01631537.1| periplasmic polyamine-binding protein of ABC transporter [Nodularia
spumigena CCY9414]
gi|119462921|gb|EAW43876.1| periplasmic polyamine-binding protein of ABC transporter [Nodularia
spumigena CCY9414]
Length = 244
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 90/154 (58%), Gaps = 18/154 (11%)
Query: 6 SIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGE-------- 57
+ D F +PF K S +A+DLV++GD WL AIE++LI+P+ E
Sbjct: 94 TTDKPFWTRFIPFRK----SPPAVASDLVTLGDYWLKAAIEQKLIQPLEEAEIKQLKHWS 149
Query: 58 --DQDWFKCLSHKWK---RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP 112
D+ W + ++ + T+G +WAAPYRWG+ +I Y + K + P +DW DLWR
Sbjct: 150 ALDKTWQQLVTRDNQGNLDTQGNVWAAPYRWGSTVIVYNRQKLQSLGWTP-QDWSDLWRD 208
Query: 113 ELAGRISMVNSPREVIGSVLKYMGASYNSNNIDS 146
L RIS+V+ REVIG VLK +G SYN+ N+D+
Sbjct: 209 GLQERISIVDQSREVIGLVLKKLGESYNTENLDT 242
>gi|390439185|ref|ZP_10227598.1| Genome sequencing data, contig C304 [Microcystis sp. T1-4]
gi|389837404|emb|CCI31722.1| Genome sequencing data, contig C304 [Microcystis sp. T1-4]
Length = 382
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 91/149 (61%), Gaps = 17/149 (11%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-----------RTRGKIWAA 79
+LV++GD WL AI LI+P+ + +W K L +W+ +T GK+W A
Sbjct: 99 GNLVTLGDAWLGKAITNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWGA 157
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY + KF + D P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 140 NSNNIDSQVAGGK---VAVQQNLALLQNQ 165
NS+++ QV G K A+Q+ + +Q
Sbjct: 217 NSSDL-KQVTGLKDELFALQKQVKFYSSQ 244
>gi|434397206|ref|YP_007131210.1| extracellular solute-binding protein family 1 [Stanieria
cyanosphaera PCC 7437]
gi|428268303|gb|AFZ34244.1| extracellular solute-binding protein family 1 [Stanieria
cyanosphaera PCC 7437]
Length = 383
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 87/135 (64%), Gaps = 14/135 (10%)
Query: 22 KAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKW----KRTR---- 73
+ + S M+A LV++GD WL+ AI+K+LI+P+ + W K L +W KR R
Sbjct: 91 QENNQSKMSA-LVTLGDTWLTTAIQKQLIQPLDLTQLTAW-KSLDSRWQNLVKRDRNGQL 148
Query: 74 ---GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGS 130
G+IW APYRWG +I Y++ KF+ D P +DW+DLW +L RIS+V+ PREVIG
Sbjct: 149 AENGQIWGAPYRWGNTIIVYRRDKFKDLDWQP-KDWQDLWHQDLRDRISIVDQPREVIGL 207
Query: 131 VLKYMGASYNSNNID 145
LK +G SYN+N+++
Sbjct: 208 TLKKLGYSYNTNDLN 222
>gi|428774536|ref|YP_007166324.1| extracellular solute-binding protein [Cyanobacterium stanieri PCC
7202]
gi|428688815|gb|AFZ48675.1| extracellular solute-binding protein family 1 [Cyanobacterium
stanieri PCC 7202]
Length = 378
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 16/150 (10%)
Query: 5 ASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW--- 61
A+ + F SLPF + + + A DLV++G+ WLS AI++ LI+P+ E +W
Sbjct: 80 ATEESRFQFPSLPFIQSEIEKA-----DLVTLGNYWLSLAIQENLIQPLNQNELNNWANI 134
Query: 62 ---FKCLSHKWKRT----RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPEL 114
F+ L + + G+IW APYRWG MIAY++ K P +DW DLWR EL
Sbjct: 135 PPVFQNLVMRNNQGDIDGNGQIWGAPYRWGYTMIAYREDKIAPLGFTP-KDWSDLWRVEL 193
Query: 115 AGRISMVNSPREVIGSVLKYMGASYNSNNI 144
+IS+++ PRE+IG +LK +G SYN+NNI
Sbjct: 194 MNQISLLSQPREIIGLILKKLGYSYNTNNI 223
>gi|425472395|ref|ZP_18851246.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9701]
gi|389881535|emb|CCI37923.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9701]
Length = 382
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 91/149 (61%), Gaps = 17/149 (11%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-----------RTRGKIWAA 79
+LV++GD WL AI LI+P+ + +W K L +W+ +T GK+W A
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWGA 157
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY + KF + D P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 140 NSNNIDSQVAGGK---VAVQQNLALLQNQ 165
NS+++ QV G K A+Q+ + +Q
Sbjct: 217 NSSDL-KQVMGLKDQLFALQKQVKFYSSQ 244
>gi|428207943|ref|YP_007092296.1| extracellular solute-binding protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428009864|gb|AFY88427.1| extracellular solute-binding protein family 1 [Chroococcidiopsis
thermalis PCC 7203]
Length = 398
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 83/136 (61%), Gaps = 14/136 (10%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWAA 79
A+LV+VGD WL+ AI + LI+P+ + W + L ++W+ +G +WAA
Sbjct: 105 ANLVTVGDYWLAAAIRQNLIQPLDPTQLSQWSQ-LPNRWQELVRRNQAGQFDAKGDVWAA 163
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY + KF+ + P +DW DLWR EL RIS+ N PREVIG LKY+G SY
Sbjct: 164 PYRWGYTVIAYNRDKFQSLNWKP-QDWGDLWREELRDRISLPNHPREVIGLTLKYLGKSY 222
Query: 140 NSNNIDSQVAGGKVAV 155
N+ N SQV V +
Sbjct: 223 NTEN-PSQVPDLTVQL 237
>gi|425459716|ref|ZP_18839202.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9808]
gi|389827779|emb|CCI20808.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9808]
Length = 382
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 17/149 (11%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWAA 79
+LV++GD WL AI LI+P+ + +W K L +W+ T GK+W A
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLETEGKVWGA 157
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY + KF + D P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 140 NSNNIDSQVAGGK---VAVQQNLALLQNQ 165
NS+++ QV G K A+Q+ + +Q
Sbjct: 217 NSSDL-KQVTGLKDQLFALQKQVRFYSSQ 244
>gi|428311092|ref|YP_007122069.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
gi|428252704|gb|AFZ18663.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
Length = 432
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 89/150 (59%), Gaps = 18/150 (12%)
Query: 14 LSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-- 71
SLPF V K+ ADLV++GD WL AI + LI+P+ E + W K L +W+
Sbjct: 113 FSLPF--VGKKTPKL--ADLVTLGDYWLESAIGQGLIKPLEVQELEGW-KNLPSRWQEIV 167
Query: 72 TR---------GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVN 122
TR G++W APYRWG +I Y++ KF + P +DW DLWRPEL RIS+++
Sbjct: 168 TRNQQGLLAKNGQVWGAPYRWGTTVIVYRRDKFEELGWTP-KDWSDLWRPELRDRISLLD 226
Query: 123 SPREVIGSVLKYMGASYNSNNIDSQVAGGK 152
PREVIG LK +G SYN N+ SQV K
Sbjct: 227 QPREVIGLTLKKLGFSYNHKNL-SQVPNLK 255
>gi|428223996|ref|YP_007108093.1| extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
gi|427983897|gb|AFY65041.1| extracellular solute-binding protein family 1 [Geitlerinema sp. PCC
7407]
Length = 388
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 12/136 (8%)
Query: 16 LPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTR-- 73
LP + A+LV++GD WL AI++ LI+P+ Q+W + W+R
Sbjct: 86 LPIPAFGGSAEQPAQANLVTLGDAWLQPAIQQGLIQPLRPETWQNW-ASIPEAWRRISQR 144
Query: 74 ---------GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSP 124
G +W APYRWG +IAY+K KF ++ L P +DW DLW+P L GR+S+++
Sbjct: 145 NEQGLVSPAGSVWGAPYRWGTTVIAYRKDKFERNGLRPPQDWADLWQPGLRGRLSLLDQE 204
Query: 125 REVIGSVLKYMGASYN 140
REVIG VLK +G SYN
Sbjct: 205 REVIGLVLKKLGQSYN 220
>gi|443657684|ref|ZP_21131934.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Microcystis aeruginosa DIANCHI905]
gi|159027984|emb|CAO87944.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333157|gb|ELS47731.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Microcystis aeruginosa DIANCHI905]
Length = 382
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 14/133 (10%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-----------RTRGKIWAA 79
+LV++GD WL AI LI+P+ + +W K L +W+ +T GK+W A
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLQTEGKVWGA 157
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY + KF + D P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 140 NSNNIDSQVAGGK 152
N++++ QV G K
Sbjct: 217 NASDL-KQVTGLK 228
>gi|307111783|gb|EFN60017.1| hypothetical protein CHLNCDRAFT_9420, partial [Chlorella
variabilis]
Length = 204
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 81/133 (60%), Gaps = 14/133 (10%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWAAP 80
D V++GD WL AI + LI+PI W+ L +W++ RG++WAAP
Sbjct: 1 DAVTLGDTWLQRAIAEGLIQPIPDARQYRWWAALYPRWQQLVCRDGAGQPDPRGEVWAAP 60
Query: 81 YRWGAMMIAYKKSKFRKHDL---APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGA 137
YRWGA ++AY++ K + D API DW DL +P+L GR++ ++SPR+V+G+ LK +G
Sbjct: 61 YRWGATLVAYRRDKLGRADGGGGAPIRDWSDLLQPQLKGRVAFMDSPRDVVGAALKTLGL 120
Query: 138 SYNSNNIDSQVAG 150
YNS+ D + G
Sbjct: 121 GYNSSAADIRRCG 133
>gi|440756421|ref|ZP_20935622.1| twin-arginine translocation pathway signal sequence domain protein
[Microcystis aeruginosa TAIHU98]
gi|440173643|gb|ELP53101.1| twin-arginine translocation pathway signal sequence domain protein
[Microcystis aeruginosa TAIHU98]
Length = 382
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 17/149 (11%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWAA 79
+LV++GD WL AI LI+P+ + +W K L +W+ T GK+W A
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLETEGKVWGA 157
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY + KF + D P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 140 NSNNIDSQVAGGK---VAVQQNLALLQNQ 165
NS+++ QV G K A+Q+ + +Q
Sbjct: 217 NSSDL-KQVMGLKDQLFALQKQVRFYSSQ 244
>gi|425456329|ref|ZP_18836040.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9807]
gi|389802604|emb|CCI18362.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9807]
Length = 382
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 84/133 (63%), Gaps = 14/133 (10%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-----------RTRGKIWAA 79
+LV++GD WL AI LI+P+ + +W K L +W+ +T GK+WAA
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWAA 157
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY + KF + D P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 140 NSNNIDSQVAGGK 152
N +++ QV G K
Sbjct: 217 NYSDL-KQVMGLK 228
>gi|425467732|ref|ZP_18847011.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9809]
gi|389829411|emb|CCI29285.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9809]
Length = 382
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 92/158 (58%), Gaps = 18/158 (11%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-------- 70
N + + + +LV++GD WL AI LI+P+ + +W K L +W+
Sbjct: 87 NSIPFREQNTAIGNLVTLGDAWLGKAITNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQ 145
Query: 71 ---RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREV 127
+T GK+W APYRWG +IAY + KF + D P +DW DLWRPEL G+I+++++ REV
Sbjct: 146 GQPQTEGKVWGAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREV 204
Query: 128 IGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
IG LK +G SYN +++ QV A++ L LQ Q
Sbjct: 205 IGLTLKKLGYSYNYSDL-KQV----TALKDQLFALQKQ 237
>gi|334121096|ref|ZP_08495171.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
gi|333455585|gb|EGK84231.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
Length = 369
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 88/154 (57%), Gaps = 13/154 (8%)
Query: 3 LCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWF 62
L + +G L + K S A+LV +GD WL+ AI ++LI+PI + +W
Sbjct: 55 LQVTQEGQLKELFALLQEWKQVPQSKNQANLVMLGDYWLTLAIRQKLIKPIDPAKFANWP 114
Query: 63 KCLSHKWKR-----------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWR 111
+ L +W++ +GK+WAAPYRWG+ +IAY+ KF+ P DWKDLWR
Sbjct: 115 Q-LPERWQKLVRRNDEGKLDPQGKVWAAPYRWGSTVIAYRTDKFKALGWTPT-DWKDLWR 172
Query: 112 PELAGRISMVNSPREVIGSVLKYMGASYNSNNID 145
EL RIS+ +S REVIG LK +G SYN+ +D
Sbjct: 173 SELRDRISLPDSAREVIGLTLKKLGKSYNTQQLD 206
>gi|428297544|ref|YP_007135850.1| extracellular solute-binding protein [Calothrix sp. PCC 6303]
gi|428234088|gb|AFY99877.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
6303]
Length = 387
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 81/133 (60%), Gaps = 12/133 (9%)
Query: 25 SASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TR 73
S + + DLV++GD +L AI +RLI P+ G+ W L +W+ ++
Sbjct: 98 SETKVPGDLVTLGDSYLQDAIARRLIRPLDVGKLPQW-SSLPSRWQELVTRDDRGFPSSQ 156
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
GK+WAAPYRWG+ M+ Y++ KF L +DW DLWR +L R+S+++ PRE+IG LK
Sbjct: 157 GKVWAAPYRWGSTMMIYRRDKFADLGLKAPQDWSDLWRDDLRNRVSLLDHPREIIGLTLK 216
Query: 134 YMGASYNSNNIDS 146
+G SYN+ ++ +
Sbjct: 217 KLGKSYNTQDLST 229
>gi|332706228|ref|ZP_08426297.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
gi|332355065|gb|EGJ34536.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
Length = 396
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 90/151 (59%), Gaps = 14/151 (9%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------ 71
+ ++ +S + ++ DLV++GD WL AIE+ LI+P+ W K L ++++
Sbjct: 90 LDLIRIRSRTPISPDLVTLGDYWLKSAIEQELIQPLNIETLPGW-KQLPPEYQKLVKRDQ 148
Query: 72 -----TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPRE 126
GK+W APYRWGA +IAY++ KF+ P DW DLWR L RIS++N PRE
Sbjct: 149 TGQLDNSGKVWGAPYRWGATVIAYRRDKFKALGWTPT-DWSDLWRESLRDRISVLNHPRE 207
Query: 127 VIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
VIG LK +G SYN +++ QV K A++Q
Sbjct: 208 VIGLTLKNLGLSYNQQDLN-QVKDLKPALRQ 237
>gi|425451461|ref|ZP_18831282.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
7941]
gi|389767205|emb|CCI07314.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
7941]
Length = 392
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 89/149 (59%), Gaps = 17/149 (11%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWAA 79
+LV++GD WL AI LI+P+ + +W K L +W+ T GK+W A
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLETEGKVWGA 157
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY + KF + D P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 140 NSNNIDSQVAGGK---VAVQQNLALLQNQ 165
N +++ QV G K A+Q+ + +Q
Sbjct: 217 NYSDL-KQVTGLKDQLFALQKQVRFYSSQ 244
>gi|425434255|ref|ZP_18814726.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9432]
gi|389676326|emb|CCH94643.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9432]
Length = 382
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 89/149 (59%), Gaps = 17/149 (11%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWAA 79
+LV++GD WL AI LI+P+ + +W K L +W+ T GK+W A
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLETEGKVWGA 157
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY + KF + D P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 140 NSNNIDSQVAGGK---VAVQQNLALLQNQ 165
N +++ QV G K A+Q+ + +Q
Sbjct: 217 NYSDL-KQVTGLKDQLFALQKQVRFYSSQ 244
>gi|67921536|ref|ZP_00515054.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii
WH 8501]
gi|416384741|ref|ZP_11684684.1| periplasmic polyamine-binding protein of ABC transporter
[Crocosphaera watsonii WH 0003]
gi|67856648|gb|EAM51889.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii
WH 8501]
gi|357264996|gb|EHJ13812.1| periplasmic polyamine-binding protein of ABC transporter
[Crocosphaera watsonii WH 0003]
Length = 387
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 16/126 (12%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-----------RTRGKIWAA 79
+D V++GD WL AIEK LI+P+ E ++W + L +WK + G IW A
Sbjct: 103 SDFVTLGDVWLGEAIEKELIDPLDIAEIENW-QTLPSRWKNLVKRDRQGNLQENGLIWGA 161
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY+ K D P +DW DLW L+ RISMVN PRE+IG LK +G SY
Sbjct: 162 PYRWGTTLIAYRSDKL---DWQP-QDWSDLWDERLSDRISMVNQPREIIGLTLKQLGKSY 217
Query: 140 NSNNID 145
N+ N++
Sbjct: 218 NTENLE 223
>gi|428769711|ref|YP_007161501.1| periplasmic polyamine-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428683990|gb|AFZ53457.1| periplasmic polyamine-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 380
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 79/124 (63%), Gaps = 13/124 (10%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWAAP 80
DL ++G+ WL FAIE LI+P+ ++W K LS +++ +G+IW AP
Sbjct: 107 DLTTLGNYWLPFAIENELIDPLDLKILENWSK-LSPLFQKLVIRNNQGKLDNQGQIWGAP 165
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
YRWG MIAY++ K + P +DW+DLW+PE+ R S++N PREVIG VLK +G SYN
Sbjct: 166 YRWGYTMIAYREDKLQNLGWQP-QDWEDLWKPEIKHRFSLLNQPREVIGLVLKKLGYSYN 224
Query: 141 SNNI 144
+ N+
Sbjct: 225 TKNL 228
>gi|209522903|ref|ZP_03271460.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|376001837|ref|ZP_09779691.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|423062300|ref|ZP_17051090.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
gi|209496490|gb|EDZ96788.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|375329748|emb|CCE15444.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|406716208|gb|EKD11359.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
Length = 371
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 84/146 (57%), Gaps = 16/146 (10%)
Query: 13 NLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR- 71
NL + +++A++ S ADLV +GD WLS AI + LIEP+ ED ++ L W+
Sbjct: 64 NLEDLYQELQAEATSN-PADLVMIGDYWLSAAIREELIEPL-NPEDLSQWQQLPENWQNL 121
Query: 72 ------------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRIS 119
G+IW APYRWG IAY+ +F K P DW+DLWR E GRIS
Sbjct: 122 VRRNPNGELSNSPEGQIWGAPYRWGTTAIAYRVDRFEKLGWTPT-DWQDLWRSECQGRIS 180
Query: 120 MVNSPREVIGSVLKYMGASYNSNNID 145
+++ REVIG LK +G SYN+ ++D
Sbjct: 181 LLDQAREVIGLTLKKLGYSYNTPDLD 206
>gi|254413480|ref|ZP_05027250.1| hypothetical protein MC7420_6059 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196179587|gb|EDX74581.1| hypothetical protein MC7420_6059 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 397
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 84/136 (61%), Gaps = 14/136 (10%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKW----KRTR-------GKIWAA 79
A+LV++GD WL AI ++LI+P+ W + L +W +R R G IW A
Sbjct: 101 ANLVTLGDYWLESAIGEQLIQPLELSTLPGW-QQLPPRWQGIVRRNRQGQLDESGLIWGA 159
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG ++IAY++ KF + P DW DLWRPEL RIS+++SPREVIG LK +G SY
Sbjct: 160 PYRWGTVVIAYRRDKFEELGWTPT-DWSDLWRPELRDRISLLDSPREVIGLTLKKLGFSY 218
Query: 140 NSNNIDSQVAGGKVAV 155
++ N+ SQV K +
Sbjct: 219 DTANL-SQVPNLKTEL 233
>gi|257060659|ref|YP_003138547.1| hypothetical protein Cyan8802_2862 [Cyanothece sp. PCC 8802]
gi|256590825|gb|ACV01712.1| conserved hypothetical protein [Cyanothece sp. PCC 8802]
Length = 391
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 78/130 (60%), Gaps = 14/130 (10%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-----------RTRGKIWAA 79
DLV++GD WLS AI+ LIEP+ W K L +W+ +G+IW A
Sbjct: 103 VDLVTLGDAWLSQAIQAELIEPLPLEVIPTWSK-LPSRWQGLVKRDSKGNLSPQGQIWGA 161
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY +F K P +DW DLWR EL RI++V+ PREVIG LK +G SY
Sbjct: 162 PYRWGTTLIAYDSHRFEKLGWTP-KDWSDLWREELRDRIALVDQPREVIGLTLKKLGYSY 220
Query: 140 NSNNIDSQVA 149
N+ ++ SQV+
Sbjct: 221 NTTDL-SQVS 229
>gi|434384916|ref|YP_007095527.1| spermidine/putrescine-binding periplasmic protein [Chamaesiphon
minutus PCC 6605]
gi|428015906|gb|AFY92000.1| spermidine/putrescine-binding periplasmic protein [Chamaesiphon
minutus PCC 6605]
Length = 403
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 81/134 (60%), Gaps = 13/134 (9%)
Query: 23 AKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR----------- 71
A+ A Y+ +L S+GD WLS AIE++LI+PI +W K L +W+
Sbjct: 95 AQGAEYIP-NLTSLGDAWLSRAIEQKLIQPIDTNNLTNWRK-LDSRWRELAQRDERGNSS 152
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
+ G+IW PYRWG +I Y++ K + ++ +DW DLW P+L RIS+++ REVIG
Sbjct: 153 STGQIWGVPYRWGTTVIIYRRDKLTEANIPLPQDWADLWNPQLRQRISLLDRSREVIGLT 212
Query: 132 LKYMGASYNSNNID 145
LK +G SYN+ ++D
Sbjct: 213 LKKLGYSYNAADLD 226
>gi|443329204|ref|ZP_21057792.1| spermidine/putrescine-binding periplasmic protein [Xenococcus sp.
PCC 7305]
gi|442791149|gb|ELS00648.1| spermidine/putrescine-binding periplasmic protein [Xenococcus sp.
PCC 7305]
Length = 393
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 84/128 (65%), Gaps = 9/128 (7%)
Query: 27 SYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRT---RGKIWAAPYRW 83
S ADLV++G+ WL AI + LI+P+ E W L ++++ GKI+AAPYRW
Sbjct: 96 SSTQADLVTLGNSWLENAIAEELIQPLDINELAGW-TSLDPRFQKLVTKDGKIYAAPYRW 154
Query: 84 GAMMIAYKKSKFRKHDLAPIE-----DWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS 138
G +IAY+K K ++ + +E DW DLWRPELAG+IS++++ RE+IG LK +G S
Sbjct: 155 GNTVIAYRKDKLQEFNKDRVEKLEITDWADLWRPELAGQISLLDNYREIIGLTLKKLGHS 214
Query: 139 YNSNNIDS 146
YNS+N+ +
Sbjct: 215 YNSSNLTA 222
>gi|428211975|ref|YP_007085119.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
gi|428000356|gb|AFY81199.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
Length = 417
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 82/144 (56%), Gaps = 15/144 (10%)
Query: 13 NLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR- 71
NL LP+ A ++ ADLV++G+ WL AI + LI P+ W L +W+
Sbjct: 109 NLPLPWINRDAGPSNL--ADLVTLGNYWLERAIAQELILPLDPTPLDQW-DNLPSQWQTL 165
Query: 72 ----------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMV 121
G++W APYRWG +IAY+ +FR P +DW DLWRPEL R+S++
Sbjct: 166 VRRNAEGQLDPEGQVWGAPYRWGTTVIAYRVDRFRNLGWTP-QDWSDLWRPELRDRLSLL 224
Query: 122 NSPREVIGSVLKYMGASYNSNNID 145
+SPREVIG LK +G SYN + +D
Sbjct: 225 DSPREVIGLTLKTLGHSYNRDRLD 248
>gi|218248017|ref|YP_002373388.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 8801]
gi|218168495|gb|ACK67232.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 8801]
Length = 391
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 78/130 (60%), Gaps = 14/130 (10%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-----------RTRGKIWAA 79
DLV++GD WL+ AI+ LIEP+ W K L +W+ +G+IW A
Sbjct: 103 VDLVTLGDAWLAQAIQAELIEPLPLEVIPTWSK-LPSRWQGLVKRDSKGNLSPQGQIWGA 161
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY +F K P +DW DLWR EL RI++V+ PREVIG LK +G SY
Sbjct: 162 PYRWGTTLIAYDSHRFEKLGWTP-KDWSDLWREELRDRIALVDQPREVIGLTLKKLGYSY 220
Query: 140 NSNNIDSQVA 149
N+ ++ SQV+
Sbjct: 221 NTTDL-SQVS 229
>gi|409993345|ref|ZP_11276490.1| periplasmic polyamine-binding protein of ABC transporter
[Arthrospira platensis str. Paraca]
gi|291567216|dbj|BAI89488.1| putative ABC transporter substrate-binding protein [Arthrospira
platensis NIES-39]
gi|409935824|gb|EKN77343.1| periplasmic polyamine-binding protein of ABC transporter
[Arthrospira platensis str. Paraca]
Length = 389
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 83/146 (56%), Gaps = 16/146 (10%)
Query: 13 NLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRT 72
NL + +++A++ S +A LV +GD WLS AI + LIEP+ ED ++ L W+
Sbjct: 82 NLEDLYQQLQAEAISN-SALLVMIGDYWLSAAIREELIEPL-NPEDLSQWQQLPQNWQNL 139
Query: 73 -------------RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRIS 119
G IW APYRWG IAY+ KF K P DW+DLWR E GRIS
Sbjct: 140 VRRNQNGELSDSLEGNIWGAPYRWGTTAIAYRVDKFEKLGWTPT-DWEDLWRSECKGRIS 198
Query: 120 MVNSPREVIGSVLKYMGASYNSNNID 145
++N REVIG LK +G SYN+ ++D
Sbjct: 199 LLNQGREVIGLTLKKLGYSYNTPDLD 224
>gi|282899638|ref|ZP_06307602.1| periplasmic polyamine-binding protein of ABC transporter
[Cylindrospermopsis raciborskii CS-505]
gi|281195517|gb|EFA70450.1| periplasmic polyamine-binding protein of ABC transporter
[Cylindrospermopsis raciborskii CS-505]
Length = 394
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 76/124 (61%), Gaps = 13/124 (10%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWAA 79
DLV++GD WL AIE++LI P+ + + W L KW++ ++G++W A
Sbjct: 108 CDLVTLGDYWLKPAIEQKLIRPLPIKKSKQW-SSLQEKWQQLVKRDDQGNWDSQGEVWGA 166
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG ++ Y + + +K + P DW DLWR +L RIS+ N PREVIG VLK +G SY
Sbjct: 167 PYRWGNTVLVYNQKQLQKFNWQP-RDWGDLWRSDLRSRISLPNHPREVIGLVLKKLGRSY 225
Query: 140 NSNN 143
N+ N
Sbjct: 226 NTVN 229
>gi|427711348|ref|YP_007059972.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 6312]
gi|427375477|gb|AFY59429.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 6312]
Length = 354
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%), Gaps = 19/151 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------ 71
FN+++A + + +S+GD WL AIE + IEP+ + L +W++
Sbjct: 68 FNQLEADTPT---TQWLSLGDAWLKLAIETKTIEPLRTLPH---WANLEPRWQQLVQRNE 121
Query: 72 -----TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPRE 126
+GKIW PYRWG ++AY+ + P +DW+DLW+PEL ++S++N PRE
Sbjct: 122 RGEPDPQGKIWGLPYRWGTTVMAYRADLIQPTGWWP-QDWEDLWKPELTQKLSLLNQPRE 180
Query: 127 VIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
VIG VLK +G SYN+ +I+ QV+G K A+++
Sbjct: 181 VIGLVLKKLGQSYNTADIN-QVSGLKPALEE 210
>gi|428204536|ref|YP_007083125.1| spermidine/putrescine-binding periplasmic protein [Pleurocapsa sp.
PCC 7327]
gi|427981968|gb|AFY79568.1| spermidine/putrescine-binding periplasmic protein [Pleurocapsa sp.
PCC 7327]
Length = 399
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 24/163 (14%)
Query: 5 ASIDGIFNNLSLPFNKVKAKSASY-----------MAADLVSVGDPWLSFAIEKRLIEPI 53
A + +F+ L + K + +SA Y +ADLV++GD WL AI ++LI P+
Sbjct: 63 AQLKDLFDLLRIWQQKPQNQSAWYDRMPVIGKETPTSADLVTLGDYWLEKAIVEQLIRPL 122
Query: 54 AGGEDQDWFKCLSHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAP 102
+ W + L +W+ RG+IW APYRWG+ +IAY++ +F K P
Sbjct: 123 NVNDLTGWQR-LPTRWQALVRRNEQGMPDERGQIWGAPYRWGSTLIAYRQEEFEKLGWLP 181
Query: 103 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 145
DW DLWR EL RIS+++ PREVIG LK + SYNS +++
Sbjct: 182 T-DWGDLWREELRDRISLLDQPREVIGLTLKKLKHSYNSQDLN 223
>gi|119490051|ref|ZP_01622675.1| periplasmic polyamine-binding protein of ABC transporter [Lyngbya
sp. PCC 8106]
gi|119454203|gb|EAW35355.1| periplasmic polyamine-binding protein of ABC transporter [Lyngbya
sp. PCC 8106]
Length = 357
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 85/135 (62%), Gaps = 13/135 (9%)
Query: 22 KAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK----------- 70
K++ + ++DL+ +GD WL+ AI+++L++P+ Q W + L +W+
Sbjct: 58 KSRPENRSSSDLIMIGDYWLTQAIQQQLVQPLDPQVWQRWNQ-LPPQWQALVTRNSQGML 116
Query: 71 RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGS 130
+G++WAAPYRWG IAY++ +F P +DW DLWR ++ +IS++N+PRE IG
Sbjct: 117 DPQGQVWAAPYRWGTTAIAYRREQFETLGWTP-QDWGDLWREDIRNQISVLNNPRETIGL 175
Query: 131 VLKYMGASYNSNNID 145
+LK +G+SYN ++D
Sbjct: 176 ILKKLGSSYNITDLD 190
>gi|411118674|ref|ZP_11391054.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710537|gb|EKQ68044.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 407
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 91/164 (55%), Gaps = 24/164 (14%)
Query: 16 LPF--NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW--------FKCL 65
+PF N+ K K +L+++GD WL AI + LI PI W FK L
Sbjct: 108 VPFLGNRTKNK-----VPNLMTLGDFWLGMAIAQGLISPIDVSSLPTWTKLAQFPQFKQL 162
Query: 66 SHKWKRTR----GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMV 121
+ ++ + G+IWA PYR G +IAY++ F + +L P DW DLWR +L RI+++
Sbjct: 163 VTRNQQGQLDPDGQIWALPYRIGTTVIAYRRDIFEQRNLQPPTDWSDLWRKDLRRRIALL 222
Query: 122 NSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
N+PREVIG LK +G SYN+ ++ S +QQ L LLQ Q
Sbjct: 223 NNPREVIGLTLKKLGKSYNTEDLAS-----VPTLQQELNLLQEQ 261
>gi|284929800|ref|YP_003422322.1| spermidine/putrescine-binding periplasmic protein [cyanobacterium
UCYN-A]
gi|284810244|gb|ADB95941.1| spermidine/putrescine-binding periplasmic protein [cyanobacterium
UCYN-A]
Length = 385
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 73/125 (58%), Gaps = 16/125 (12%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRT-----------RGKIWAA 79
+DLV++GD WL+ AI+K LI+PI +W K S+ W+ G +W A
Sbjct: 101 SDLVTLGDSWLTQAIQKDLIQPITISSWHNWHKLPSY-WQNLVIRDQNGIPNKNGFVWGA 159
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY+ K I+DW DLW P+L RIS+V+ PREVIG LK + SY
Sbjct: 160 PYRWGTTLIAYRADKLD----GEIKDWSDLWDPKLENRISLVDQPREVIGLTLKKLNKSY 215
Query: 140 NSNNI 144
N+ N+
Sbjct: 216 NTKNL 220
>gi|428220899|ref|YP_007105069.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 7502]
gi|427994239|gb|AFY72934.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 7502]
Length = 357
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 69/116 (59%), Gaps = 8/116 (6%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR--TR-GKIWAAPYRWGAMMI 88
D+ S+GD WL AI + LI P+ W + LS WK+ TR GK+W PYRWG I
Sbjct: 86 DVASLGDAWLDLAIAQHLISPLTITSIPQW-QNLSPLWKQAVTRNGKVWGIPYRWGLTAI 144
Query: 89 AYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI 144
AY+ K PI W DLWR EL G+I++ N PREVIG LK +G SYN+ NI
Sbjct: 145 AYRSDKLD----IPINGWADLWRTELKGKITLPNDPREVIGLTLKKLGYSYNTANI 196
>gi|126660470|ref|ZP_01731578.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. CCY0110]
gi|126618229|gb|EAZ88990.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. CCY0110]
Length = 387
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 76/125 (60%), Gaps = 16/125 (12%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-----------RTRGKIWAA 79
+D V++GD WL+ AI+K LIEP+ + ++W K L +W+ + G IW A
Sbjct: 103 SDFVTLGDIWLADAIKKDLIEPLNLTQVENWDK-LPSRWQTLVKRNKQGQLQDNGLIWGA 161
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY+ K D P +DW DLW L+ RISMV+ REVIG LKY+G SY
Sbjct: 162 PYRWGTTLIAYRSDKL---DWQP-QDWSDLWDQRLSDRISMVDQYREVIGLTLKYLGHSY 217
Query: 140 NSNNI 144
N+ N+
Sbjct: 218 NTENL 222
>gi|443313248|ref|ZP_21042860.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 7509]
gi|442776653|gb|ELR86934.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 7509]
Length = 383
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 80/143 (55%), Gaps = 15/143 (10%)
Query: 30 AADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWA 78
ADL+++GD L AI ++LI+P+ + W + L +W+ G+IWA
Sbjct: 101 VADLLTLGDFRLKEAIAQKLIQPLEITDLSQW-QNLPSRWQELVRRNAQGEVDINGQIWA 159
Query: 79 APYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS 138
APYRWG +IAY + KF P +W DLWR EL RIS+ N PREVIG LK +G S
Sbjct: 160 APYRWGNTVIAYNRKKFESLGWTPT-NWSDLWREELRSRISLPNQPREVIGLTLKKLGYS 218
Query: 139 YNSNNID--SQVAGGKVAVQQNL 159
YNS N+ SQ+A + Q +
Sbjct: 219 YNSQNLQQVSQLADQLKTLHQQV 241
>gi|16331125|ref|NP_441853.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|383322868|ref|YP_005383721.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|383326037|ref|YP_005386890.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|383491921|ref|YP_005409597.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|384437189|ref|YP_005651913.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|451815282|ref|YP_007451734.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|1653619|dbj|BAA18531.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|339274221|dbj|BAK50708.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|359272187|dbj|BAL29706.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|359275357|dbj|BAL32875.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|359278527|dbj|BAL36044.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|407961501|dbj|BAM54741.1| spermidine/putrescine-binding periplasmicprotein [Bacillus subtilis
BEST7613]
gi|451781251|gb|AGF52220.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
Length = 384
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 80/161 (49%), Gaps = 24/161 (14%)
Query: 5 ASIDGIFNNLSLPFNKVKAKSASYM-----------AADLVSVGDPWLSFAIEKRLIEPI 53
A++ +F+NL N A ++ + A LV+ GD WL I+++LI+P
Sbjct: 68 ANLQSLFDNLQTWHNAQNADTSKGLWGSGSRANQTPKAQLVTGGDLWLERVIKEKLIQPF 127
Query: 54 AGGEDQDWFKCLSHKWK-----------RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAP 102
+ W L +W+ GKIWA PYRWG MI Y++ F P
Sbjct: 128 VPDQLSQW-SSLPPRWQLLGQRNDQGLPDQSGKIWAVPYRWGPTMIIYRQQPFADLGWQP 186
Query: 103 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
DW DLWRPEL RI++V+ PRE IG LK +G SYN N
Sbjct: 187 T-DWSDLWRPELKQRIALVDDPREAIGLTLKKLGYSYNVTN 226
>gi|427419007|ref|ZP_18909190.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
gi|425761720|gb|EKV02573.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
Length = 380
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 72/125 (57%), Gaps = 9/125 (7%)
Query: 29 MAADLVSVGDPWLSFAIEKRLIEPI-----AGGEDQDWFKCLSHK---WKRTRGKIWAAP 80
+ A LV++ DPWL AI + LI+P+ A + W K L + RGK+WA P
Sbjct: 101 VGAHLVTLSDPWLEHAIRQDLIQPLPDFPLAYALPEPWQKLLRRDREGYSSERGKLWAVP 160
Query: 81 YRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
YR +MIAY+K F+ + + PI W DLWRPELAGRI+M N PR I VLK +G S
Sbjct: 161 YRTQGLMIAYQKPIFQTNTNNKPITKWADLWRPELAGRIAMPNQPRLAIAIVLKALGYSV 220
Query: 140 NSNNI 144
N +
Sbjct: 221 NDEAV 225
>gi|428217472|ref|YP_007101937.1| extracellular solute-binding protein [Pseudanabaena sp. PCC 7367]
gi|427989254|gb|AFY69509.1| extracellular solute-binding protein family 1 [Pseudanabaena sp.
PCC 7367]
Length = 419
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 15/136 (11%)
Query: 22 KAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGE---DQDWFKCLSHKWKRT---RGK 75
K +A DLVS+ D WL AI + LI PI + W K L W+ + G+
Sbjct: 133 KTNAAQRKVPDLVSLSDAWLDAAIAQDLIRPIPAADLAKISQWPK-LEPNWQASVTRNGQ 191
Query: 76 IWAAPYRWGAMMIAYK--KSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
+W PYRWG+ +IAY+ ++KF I+ W DLWRPEL RI + +SPREVIG VLK
Sbjct: 192 VWGVPYRWGSTVIAYRPDRTKFE------IKSWADLWRPELKRRIVLPDSPREVIGLVLK 245
Query: 134 YMGASYNSNNIDSQVA 149
+G SYN+ N+++ A
Sbjct: 246 KLGDSYNNENLNAIAA 261
>gi|220909337|ref|YP_002484648.1| ABC transporter periplasmic solute-binding protein [Cyanothece sp.
PCC 7425]
gi|219865948|gb|ACL46287.1| ABC transporter, periplasmic solute-binding protein [Cyanothece sp.
PCC 7425]
Length = 377
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 89/157 (56%), Gaps = 26/157 (16%)
Query: 27 SYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR--TRG---------- 74
S A LVS+GD WL A +++LI+P+ + + W + L +W++ RG
Sbjct: 82 SLATAPLVSLGDYWLVSAQQQKLIQPLDPAQLRHW-QQLPERWQQLVQRGSQQTPAQPAR 140
Query: 75 -----KIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIG 129
++W APYRWG +IAY+K KF + P DW+DLWR L R+S+++ PREVIG
Sbjct: 141 TAIKQEVWGAPYRWGMTVIAYRKDKFEQLGWLP-ADWQDLWRSPLRHRLSLLDHPREVIG 199
Query: 130 SVLKYMGASYNSNNIDSQVAGGKVA-VQQNLALLQNQ 165
LK +G SYN+N A K+A +++ LA L Q
Sbjct: 200 LTLKKLGYSYNTN------APAKIADLERELAQLNRQ 230
>gi|145355770|ref|XP_001422123.1| ABC(binding protein) family transporter: polyamine [Ostreococcus
lucimarinus CCE9901]
gi|144582363|gb|ABP00440.1| ABC(binding protein) family transporter: polyamine [Ostreococcus
lucimarinus CCE9901]
Length = 388
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 94/179 (52%), Gaps = 23/179 (12%)
Query: 1 MNLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQD 60
M AS+ I+ +L+ K + AD ++GD WL+ AI LI PI G E
Sbjct: 59 MTAVASVGEIYGSLARGGKKTRG-------ADATTLGDEWLAPAIANGLIRPIPGAESSA 111
Query: 61 WFKCLSHKWK-------RTR-----GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKD 108
WF LS W+ RT G+I+ APY +G +IAY+K K K + P DW+D
Sbjct: 112 WFARLSPVWRTLVRRDARTGRVSAGGEIYGAPYGFGCAVIAYRKDKLPKG-VKPPRDWED 170
Query: 109 LWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI---DSQVAGGKVAVQQNLALLQN 164
L+ P L G I M N+PR V+ + LK G S N+++I D +V+ A+++N+ + +
Sbjct: 171 LFDPRLKGLIGMPNAPRLVLSAALKAEGMSANASDIGGADGRVSARVRALRENVKVFDD 229
>gi|81301075|ref|YP_401283.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 7942]
gi|81169956|gb|ABB58296.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 7942]
Length = 354
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 18/143 (12%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK----RTR-------GKIWAAP 80
+L+ +GD WL AI + P + W L +W+ R R G+IWAAP
Sbjct: 78 NLLGIGDAWLQSAIASGRLAPFNPNHWRHW-TSLPQRWRQQLRRDRQGVPSEAGEIWAAP 136
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
YRWG MIA+++ + +P++DW DLWRPEL G++ + + PREVIG LK +G SYN
Sbjct: 137 YRWGTTMIAFRRDRL----TSPLQDWTDLWRPELRGQLILPDDPREVIGLTLKRLGWSYN 192
Query: 141 SNNIDS--QVAGGKVAVQQNLAL 161
N+ Q+ A+QQ + L
Sbjct: 193 QANLAEIPQLEPLLAALQQQVKL 215
>gi|56751841|ref|YP_172542.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Synechococcus elongatus PCC 6301]
gi|56686800|dbj|BAD80022.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 6301]
Length = 342
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 18/143 (12%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK----RTR-------GKIWAAP 80
+L+ +GD WL AI + P + W L +W+ R R G+IWAAP
Sbjct: 66 NLLGIGDAWLQSAIASGRLAPFNPNHWRHW-TSLPQRWRQQLRRDRQGVPSEAGEIWAAP 124
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
YRWG MIA+++ + +P++DW DLWRPEL G++ + + PREVIG LK +G SYN
Sbjct: 125 YRWGTTMIAFRRDRLT----SPLQDWTDLWRPELRGQLILPDDPREVIGLTLKRLGWSYN 180
Query: 141 SNNIDS--QVAGGKVAVQQNLAL 161
N+ Q+ A+QQ + L
Sbjct: 181 QANLAEIPQLEPLLAALQQQVKL 203
>gi|443323260|ref|ZP_21052268.1| spermidine/putrescine-binding periplasmic protein [Gloeocapsa sp.
PCC 73106]
gi|442786998|gb|ELR96723.1| spermidine/putrescine-binding periplasmic protein [Gloeocapsa sp.
PCC 73106]
Length = 374
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 11/122 (9%)
Query: 33 LVSVGDPWLSFAIEKRLIEPIAGGEDQDW----------FKCLSHKWKRTRGKIWAAPYR 82
LV++GD WL AI ++LI+P+ E +W K S + +G+IW APYR
Sbjct: 79 LVTLGDTWLEQAIPQKLIQPLVIEELSNWQQLPSAYQELVKRNSQGYVDPQGEIWGAPYR 138
Query: 83 WGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSN 142
WG MIAY+ + ++ + P +DW DLW+ L RIS+ REVIG LK +G SYN
Sbjct: 139 WGTTMIAYRSDRLKEVGIVP-QDWSDLWQSALKERISLPAHSREVIGLTLKKLGYSYNQT 197
Query: 143 NI 144
N+
Sbjct: 198 NL 199
>gi|427724862|ref|YP_007072139.1| extracellular solute-binding protein [Leptolyngbya sp. PCC 7376]
gi|427356582|gb|AFY39305.1| extracellular solute-binding protein family 1 [Leptolyngbya sp. PCC
7376]
Length = 374
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 81/139 (58%), Gaps = 11/139 (7%)
Query: 29 MAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK----RTRGKIWAAPYRWG 84
+A DLV++G+ W AI L++P+A + + W + L W+ GK + PYRWG
Sbjct: 97 IAPDLVTIGNGWFKEAIAAELLQPLAVDQLETW-QDLDEPWRTFIEEQSGKTYGIPYRWG 155
Query: 85 AMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI 144
++ Y+K K +K D + DW+DLWR EL +IS+++ REVIG VLK G SYN +
Sbjct: 156 TTLLLYRKDKLKKFDWQ-LTDWEDLWREELKNKISLLDHSREVIGFVLKNFGFSYNDKDP 214
Query: 145 DSQVAGGKVAVQQNLALLQ 163
++ +AG + + L LL
Sbjct: 215 EA-IAG----LSEELGLLH 228
>gi|172036028|ref|YP_001802529.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51142]
gi|354552834|ref|ZP_08972141.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51472]
gi|171697482|gb|ACB50463.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51142]
gi|353554664|gb|EHC24053.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51472]
Length = 390
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 16/126 (12%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-----------RTRGKIWAA 79
+D V++GD WL+ AI+K LIEP+ + ++W + L +W+ + G IW A
Sbjct: 103 SDFVTLGDVWLADAIKKELIEPLNLTQIENWNQ-LPSRWQTLVKRDQQGQLQDNGLIWGA 161
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 139
PYRWG +IAY+ K D P +DW DLW L+ RIS+V+ REV+G LK +G SY
Sbjct: 162 PYRWGTTLIAYRSDKL---DWQP-QDWSDLWDQRLSDRISVVDQYREVMGLTLKKLGQSY 217
Query: 140 NSNNID 145
N+ +D
Sbjct: 218 NTEKLD 223
>gi|170076941|ref|YP_001733579.1| periplasmic binding protein of ABC transporter [Synechococcus sp.
PCC 7002]
gi|169884610|gb|ACA98323.1| periplasmic binding protein of ABC transporter [Synechococcus sp.
PCC 7002]
Length = 377
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 13/131 (9%)
Query: 27 SYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGK 75
S DL+++G W AI ++P++ E W + L W+R +G+
Sbjct: 91 SAAVPDLLTLGHGWYQQAIALGFVQPLSLEELTRW-EELGEPWQRFLRRNVQGEIDPQGQ 149
Query: 76 IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 135
+W PYRWG M+ Y+K K + P DW DLWRPEL G+IS++N REV+G +LK
Sbjct: 150 LWGQPYRWGTTMLVYRKDKLKNLGWTPT-DWADLWRPELQGKISLLNQSREVLGLLLKKQ 208
Query: 136 GASYNSNNIDS 146
G SYN + ++
Sbjct: 209 GKSYNETDPEA 219
>gi|443476073|ref|ZP_21065996.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
gi|443018979|gb|ELS33141.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
Length = 361
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 71/118 (60%), Gaps = 11/118 (9%)
Query: 33 LVSVGDPWLSFAIEKRLIEPIAGG---EDQDWFKCLSHKWKRT---RGKIWAAPYRWGAM 86
LVS+GD WL AI + L++PIA + W K LS W+++ ++W PYRWGA
Sbjct: 86 LVSLGDSWLDPAIAQSLVQPIAPNLLDKIPQWQK-LSPFWQQSVTRNNQVWGVPYRWGAT 144
Query: 87 MIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI 144
IAY+ K K D I W DLWRPEL ++S+ + REVIG VLK MG SY +N+
Sbjct: 145 AIAYRSDKL-KFD---ITQWSDLWRPELKQKLSLPDDAREVIGLVLKKMGQSYQVDNL 198
>gi|384250495|gb|EIE23974.1| periplasmic binding protein-like II, partial [Coccomyxa
subellipsoidea C-169]
Length = 310
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 16/149 (10%)
Query: 7 IDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLS 66
I IF L P + SA+ AD V++GD WL AI LI+PI E W+ L
Sbjct: 42 IADIFEELGQP-RSISLNSAAR--ADAVTLGDVWLGPAIRAGLIQPIPEAESNRWWGNLP 98
Query: 67 HKWKR-----------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLA--PIEDWKDLWRPE 113
+W+ +G +WA P+RWG +IAY+KS + PI DW DL +P
Sbjct: 99 PRWRELVKRGADGSVDPKGLVWACPHRWGCTLIAYRKSARARSAAGAHPIRDWGDLLQPC 158
Query: 114 LAGRISMVNSPREVIGSVLKYMGASYNSN 142
L R++ V+SPRE +G+ LK +G +N+
Sbjct: 159 LRQRVAWVDSPREFVGAALKTLGGGFNTG 187
>gi|282898041|ref|ZP_06306036.1| periplasmic polyamine-binding protein of ABC transporter
[Raphidiopsis brookii D9]
gi|281197185|gb|EFA72086.1| periplasmic polyamine-binding protein of ABC transporter
[Raphidiopsis brookii D9]
Length = 275
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 66/110 (60%), Gaps = 13/110 (11%)
Query: 45 IEKRLIEPIAGGEDQDWFKCLSHKWKR-----------TRGKIWAAPYRWGAMMIAYKKS 93
+ K+LI+P+ + + W L KW++ ++GK+W APYRWG ++ Y +
Sbjct: 1 MSKKLIQPLPIKKSKQW-SSLQEKWQQLVKRDDQGNWDSQGKVWGAPYRWGNTVLVYNQK 59
Query: 94 KFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
+ + + PI DW DLWR +L RIS+ N PREVIG VLK +G SYN+ N
Sbjct: 60 QLQNFNWQPI-DWSDLWRSDLRSRISLPNHPREVIGLVLKKLGRSYNTVN 108
>gi|86605920|ref|YP_474683.1| polyamine ABC transporter polyamine-binding protein [Synechococcus
sp. JA-3-3Ab]
gi|86554462|gb|ABC99420.1| polyamine ABC transporter, polyamine-binding protein [Synechococcus
sp. JA-3-3Ab]
Length = 374
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 8/123 (6%)
Query: 30 AADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK---RTRGKIWAAPYRWGAM 86
AA L +G L AI ++P+ + ++ L +W+ R G+IW P+RWG
Sbjct: 96 AAALSLLGADVLDRAIAAGWLDPLPPDLLGERWQHLDRRWQAAARREGQIWGVPWRWGVT 155
Query: 87 MIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDS 146
IAY++ + PI DW DLWRPELAG++++ + PREVIG VLK +G SYN + +D
Sbjct: 156 AIAYRRDRVSD----PIRDWADLWRPELAGKLTLPDHPREVIGLVLKKLGRSYN-DPLDP 210
Query: 147 QVA 149
+ A
Sbjct: 211 EEA 213
>gi|308813680|ref|XP_003084146.1| putrescine-binding periplasmic protein-related (ISS) [Ostreococcus
tauri]
gi|116056029|emb|CAL58562.1| putrescine-binding periplasmic protein-related (ISS) [Ostreococcus
tauri]
Length = 429
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 1 MNLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQD 60
++ SI + L P ++ K D ++GD WL AIE+ LI PI E
Sbjct: 102 LSTTPSIARSYEELLRPGKRIGKK-----GIDCATLGDEWLRPAIERGLILPIPNAERSA 156
Query: 61 WFKCLSHKWKR------------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKD 108
W+ + W++ + G I+ APYR+G + IAY+K K K + P DW D
Sbjct: 157 WWNAIPPVWRQLVRRDPRSGLLSSSGDIFGAPYRFGCVTIAYRKDKLPKG-VKPPTDWSD 215
Query: 109 LWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI 144
L+ P L G I M N+PR V+ + LK G S N ++
Sbjct: 216 LFDPRLQGMIGMPNAPRLVLSAALKAEGMSVNVGDV 251
>gi|86609220|ref|YP_477982.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557762|gb|ABD02719.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 383
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G+IW P+RWG IAY++ + R+ PI DW DLWRPELAG++++ + PREVIG LK
Sbjct: 143 GQIWGVPWRWGVTAIAYRRDRVRE----PIRDWADLWRPELAGKLTLPDHPREVIGLTLK 198
Query: 134 YMGASYN 140
MG SYN
Sbjct: 199 KMGRSYN 205
>gi|443316967|ref|ZP_21046392.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
gi|442783430|gb|ELR93345.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
Length = 393
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 73/127 (57%), Gaps = 14/127 (11%)
Query: 34 VSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR--TR---------GKIWAAPYR 82
VS+G+ WL+ AI+++LI+P + W LS +W TR G +WAAPYR
Sbjct: 98 VSLGNDWLAGAIQQKLIQPFGVADLPHW-PALSERWHTLVTRDIQGFPAANGSVWAAPYR 156
Query: 83 WGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSN 142
WGA+++ Y ++ F P + W DLWR ELAGR+ + PR ++G +LK + S N
Sbjct: 157 WGALVMLYNRAPFEALGWQP-QSWTDLWRSELAGRVILPRHPRLLLGIILKSLEESANHP 215
Query: 143 NIDSQVA 149
+ +QVA
Sbjct: 216 D-PTQVA 221
>gi|22298258|ref|NP_681505.1| hypothetical protein tll0716 [Thermosynechococcus elongatus BP-1]
gi|22294437|dbj|BAC08267.1| tll0716 [Thermosynechococcus elongatus BP-1]
Length = 352
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 25 SASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR-----TRG-KIWA 78
+A + + ++S+GD WL+ A+ + I PI Q+ F + W+ ++G +W
Sbjct: 74 AAGNLGSAVLSLGDAWLNQAMSQHQIAPIPKTRIQNRFDW-AEPWQPLLQAISQGDTLWG 132
Query: 79 APYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS 138
PYRWGA + Y++ F P DW LW P + G S++N+PREVIG LK +G S
Sbjct: 133 LPYRWGATALIYRRDFFADLGWEPT-DWDVLWHPAVQGHYSLLNTPREVIGLTLKSLGLS 191
Query: 139 YNS 141
YNS
Sbjct: 192 YNS 194
>gi|414585609|tpg|DAA36180.1| TPA: hypothetical protein ZEAMMB73_943866 [Zea mays]
Length = 232
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 2 NLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW 61
L A++DGIF+ +S +K + + S MAAD+VS+GD WL +AI K L+EP+ E+QDW
Sbjct: 156 ELRANLDGIFSEMSRCMDKGQVQPKSAMAADVVSLGDSWLGYAICKELLEPVKNAEEQDW 215
Query: 62 FKCLSHKWK 70
F+ LS +WK
Sbjct: 216 FRRLSDRWK 224
>gi|255073983|ref|XP_002500666.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226515929|gb|ACO61924.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
Length = 580
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 42/167 (25%)
Query: 19 NKVKAKSAS-YMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQ-DWFKCLSHKWK------ 70
+K K+K A Y+ AD+VSVGD +L+ A+ + L+ P+ Q +W+ L + W+
Sbjct: 191 DKKKSKGAPKYLKADVVSVGDEFLAAAVTRGLVLPLDPSVVQNEWYARLPYAWRELATRD 250
Query: 71 -RT--------------------------------RGKIWAAPYRWGAMMIAYKKSKFRK 97
RT + ++ PYRWG +IAY+K K
Sbjct: 251 PRTGYPSAPAPPAPPGRYPNTTAVVYTNGDPDQTAKPAMYGVPYRWGCTLIAYRKDKLPA 310
Query: 98 H-DLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
P DW DLWRPE R+ M + PR+++ + L+ G S N++
Sbjct: 311 SLRERPPRDWDDLWRPEFKRRVGMGSGPRQMLTAALRAEGMSANADG 357
>gi|302829761|ref|XP_002946447.1| hypothetical protein VOLCADRAFT_103032 [Volvox carteri f.
nagariensis]
gi|300268193|gb|EFJ52374.1| hypothetical protein VOLCADRAFT_103032 [Volvox carteri f.
nagariensis]
Length = 561
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 64/107 (59%)
Query: 31 ADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKIWAAPYRWGAMMIAY 90
AD++++GD W+ AI++ L++PI G W++ L + ++ + A + AY
Sbjct: 147 ADVITLGDIWMGAAIQRGLLQPIPGATSSRWYRMLPQRLRQLGHRNAAGMPDPTGEVYAY 206
Query: 91 KKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGA 137
++ + + PI DW DL +P LAGR++M++SPRE++ + ++ + A
Sbjct: 207 RRDRLLRRGGRPILDWCDLLQPALAGRVAMLDSPRELLAAAVRSLAA 253
>gi|254421830|ref|ZP_05035548.1| hypothetical protein S7335_1980 [Synechococcus sp. PCC 7335]
gi|196189319|gb|EDX84283.1| hypothetical protein S7335_1980 [Synechococcus sp. PCC 7335]
Length = 393
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 24 KSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-----------RT 72
++ S +LVS+ D WL+ AI + LIEP++ L KW+ +
Sbjct: 84 QTDSAATDNLVSLADYWLTEAIVQDLIEPLSIPTTS--LDLLPSKWQAFGRRDHTGQITS 141
Query: 73 RGKIWAAPYRWGAMMIAYKKSKF---RKHDLAPIEDWKDLWRPELAGRISMVNSPREVIG 129
G++W+ PY+ +++ Y+ S+F + P W+DL P+L+ I++ + PR +I
Sbjct: 142 DGELWSVPYKLQPLVVVYRHSQFLAKSRTGKQPFSSWQDLLAPDLSRSIALPSHPRILIS 201
Query: 130 SVLKYMGASYNSNNIDSQVAGGKVAVQQN 158
+ K S+N + D+ V+ ++ Q N
Sbjct: 202 LLQKLQTGSFNPVSTDNPVSSEQLLSQLN 230
>gi|402814635|ref|ZP_10864229.1| spermidine/putrescine-binding periplasmic protein 2 [Paenibacillus
alvei DSM 29]
gi|402508482|gb|EJW19003.1| spermidine/putrescine-binding periplasmic protein 2 [Paenibacillus
alvei DSM 29]
Length = 348
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 9 GIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHK 68
IF N K+KA A+Y DL+ D ++ I++ L+EP+ + + F+ ++ +
Sbjct: 59 AIFANNEELLAKLKAGGANY---DLIQPSDYMVASMIKQDLLEPLDLNQIPN-FQYVTDR 114
Query: 69 WKRTR---GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPR 125
+K G ++ Y WG IAY +K+ K AP DW DLW+ E G++ +++ R
Sbjct: 115 FKNPEFDPGNKYSIVYTWGVTGIAYN-TKYVKQ--APT-DWADLWKDEYKGKVLLLDDNR 170
Query: 126 EVIGSVLKYMGASYNSNN 143
E+IG LK G S +S N
Sbjct: 171 EIIGMALKKAGKSNSSEN 188
>gi|303290100|ref|XP_003064337.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226453935|gb|EEH51242.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 647
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 48/178 (26%)
Query: 15 SLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGG-EDQDWFKCLSHKWKRTR 73
S P + + AD+VS+GD +L+ AI+ LI P+ + +W+ L W+
Sbjct: 234 STPISSLVRNGPKIAKADVVSLGDEFLAPAIQNGLILPLPDDVANAEWYARLPAVWRALA 293
Query: 74 ----------------------------------------------GKIWAAPYRWGAMM 87
GK++ PYRWG +
Sbjct: 294 CRDASGYPAPPPPPGSYKRGANANSNGSSAAVSASASTAEANNGRYGKLYGVPYRWGCYL 353
Query: 88 IAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 145
IAY+K K + L P DW DL+RP+ ++ + + R ++ L+ G S N+ ++D
Sbjct: 354 IAYRKDKIPR-GLRPPTDWPDLFRPQYKKKVGIASGSRFMLTVALRAGGRSANATDVD 410
>gi|15806323|ref|NP_295029.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Deinococcus
radiodurans R1]
gi|6459053|gb|AAF10875.1|AE001977_8 spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Deinococcus
radiodurans R1]
Length = 368
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G I+ PY++ A +AY ++ + P EDW ++ PE + ++++ PREVIG+ LK
Sbjct: 137 GNIYTVPYQFAATGLAYNSGRY----VPPAEDWGLIFGPEDKVKFALLDDPREVIGAALK 192
Query: 134 YMGASYNSNNID 145
Y+G S N+ +D
Sbjct: 193 YLGYSVNTEKVD 204
>gi|126665278|ref|ZP_01736260.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
ELB17]
gi|126629906|gb|EBA00522.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
ELB17]
Length = 359
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 27/125 (21%)
Query: 50 IEPIAGGEDQDWFKCLSH---KWKRTR--GKIWAAPYRWGAMMIAYKKSKFRKHDLA--P 102
+EPI D+ L+H +W+ ++++ PY WG + IAY++ DL P
Sbjct: 102 LEPI----DETDIPNLAHIDPRWRTVHEEAEVYSVPYFWGTLGIAYRQ------DLVAFP 151
Query: 103 IEDWKDLWRP--ELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLA 160
+ W DL +P EL GR++M++ R++IG LK +G S NS +I +++ A
Sbjct: 152 VTSWMDLLQPAEELHGRVAMISGTRDLIGVALKALGYSLNSTDIQE--------LKEAEA 203
Query: 161 LLQNQ 165
LLQ Q
Sbjct: 204 LLQAQ 208
>gi|406671762|ref|ZP_11079001.1| hypothetical protein HMPREF9706_01261 [Facklamia hominis CCUG
36813]
gi|405581012|gb|EKB55071.1| hypothetical protein HMPREF9706_01261 [Facklamia hominis CCUG
36813]
Length = 357
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRT--RGK 75
KV+ +Y DL+ + + IE L+E I + + H ++ G
Sbjct: 74 LTKVQQGGTNY---DLIGPSEYMVETMIELGLLETIDAAQLDNLQYIDEHFLDQSFDPGN 130
Query: 76 IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 135
++ PY WG + I Y SKF D I+ W DLW+PEL G++ M++ REV+G L+
Sbjct: 131 HYSIPYFWGTLGIVYN-SKFI--DEGDIQSWDDLWKPELRGKVMMIDGAREVLGIGLQSQ 187
Query: 136 GASYNSNNIDSQ 147
G S N DSQ
Sbjct: 188 GWSLNET--DSQ 197
>gi|325568827|ref|ZP_08145120.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus casseliflavus
ATCC 12755]
gi|420263774|ref|ZP_14766410.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus sp. C1]
gi|325157865|gb|EGC70021.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus casseliflavus
ATCC 12755]
gi|394769216|gb|EJF49079.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus sp. C1]
Length = 357
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 16/134 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------ 71
F K++ SY D+ + + +E+ L++P+ D K L + R
Sbjct: 74 FTKIQQGGTSY---DIAIPSEYMIEKMMEQNLLKPL----DHSKIKGLDNIDPRFLDLSF 126
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
G ++ PY WG + I Y F D I W DLW+PELA I +++ REV+G
Sbjct: 127 DPGNQYSIPYFWGTLGIVYNDKFF---DEGEITQWDDLWKPELANSIMLIDGAREVMGLG 183
Query: 132 LKYMGASYNSNNID 145
L +G S NS + D
Sbjct: 184 LDSLGYSLNSKDDD 197
>gi|257867366|ref|ZP_05647019.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC30]
gi|257873697|ref|ZP_05653350.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC10]
gi|257801422|gb|EEV30352.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC30]
gi|257807861|gb|EEV36683.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC10]
Length = 357
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 16/134 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------ 71
F K++ SY D+ + + +E+ L++P+ D K L + R
Sbjct: 74 FTKIQQGGTSY---DIAIPSEYMIEKMMEQNLLKPL----DHSKIKGLDNIDPRFLDLSF 126
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
G ++ PY WG + I Y F D I W DLW+PELA I +++ REV+G
Sbjct: 127 DPGNQYSIPYFWGTLGIVYNDKFF---DEGEITQWDDLWKPELANSIMLIDGAREVMGLG 183
Query: 132 LKYMGASYNSNNID 145
L +G S NS + D
Sbjct: 184 LDSLGYSLNSKDDD 197
>gi|399543358|ref|YP_006556666.1| Norspermidine sensor [Marinobacter sp. BSs20148]
gi|399158690|gb|AFP29253.1| Norspermidine sensor [Marinobacter sp. BSs20148]
Length = 359
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 27/125 (21%)
Query: 50 IEPIAGGEDQDWFKCLSH---KWKRTR--GKIWAAPYRWGAMMIAYKKSKFRKHDLA--P 102
+EPI D+ L+H +W+ ++++ PY WG + IAY++ DL P
Sbjct: 102 LEPI----DETDIPNLAHIDPRWRTVHEAAELYSVPYFWGTLGIAYRQ------DLVAFP 151
Query: 103 IEDWKDLWRP--ELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLA 160
+ W DL +P EL GR++M++ R++IG LK +G S NS ++ +++ A
Sbjct: 152 VTSWMDLLQPAEELHGRVAMISGTRDLIGVALKALGYSLNSTDVQE--------LKEAEA 203
Query: 161 LLQNQ 165
LLQ Q
Sbjct: 204 LLQAQ 208
>gi|257877440|ref|ZP_05657093.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
gi|257811606|gb|EEV40426.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
Length = 357
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 16/134 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------ 71
F K++ SY D+ + + +E+ L++P+ D K L + R
Sbjct: 74 FTKIQQGGTSY---DIAIPSEYMIEKMMEQNLLKPL----DHSKIKGLDNIDPRFLDLSF 126
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
G ++ PY WG + I Y F D I W DLW+PELA I +++ REV+G
Sbjct: 127 DPGNQYSIPYFWGTLGIVYNDKFF---DEGVITQWDDLWKPELANSIMLIDGAREVMGLG 183
Query: 132 LKYMGASYNSNNID 145
L +G S NS + D
Sbjct: 184 LDSLGYSLNSKDDD 197
>gi|310659049|ref|YP_003936770.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [[Clostridium] sticklandii]
gi|308825827|emb|CBH21865.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [[Clostridium] sticklandii]
Length = 345
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG M I Y K+K ++ W LW P+ G+I M++SPR+ IG LK +G
Sbjct: 124 YSVPYLWGTMGIVYNKTKVSDS----VDSWDILWNPKYEGQIIMLDSPRDTIGITLKKLG 179
Query: 137 ASYNSNN 143
S N+ N
Sbjct: 180 YSLNTKN 186
>gi|386856201|ref|YP_006260378.1| Spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Deinococcus
gobiensis I-0]
gi|379999730|gb|AFD24920.1| Spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Deinococcus
gobiensis I-0]
Length = 368
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G + PY++ A +AY ++ + P E W+ ++ PE R ++++ PREVIG+ LK
Sbjct: 137 GNTYTVPYQFAATGLAYNSGRY----VPPEESWRLIFGPEDRVRFALLDDPREVIGAALK 192
Query: 134 YMGASYNSNNID 145
Y+G S NS +++
Sbjct: 193 YLGHSVNSTDVE 204
>gi|315641327|ref|ZP_07896403.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus italicus DSM
15952]
gi|315482900|gb|EFU73420.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus italicus DSM
15952]
Length = 357
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y D+ W DLWRPEL I +++ RE+IG L
Sbjct: 129 GNQYSIPYFWGTLGIVYNDKFVNAEDMT---SWNDLWRPELKDNIMLIDGAREIIGLGLN 185
Query: 134 YMGASYNSNNID 145
+G S NS N+D
Sbjct: 186 SLGYSVNSKNMD 197
>gi|339301436|ref|ZP_08650537.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus agalactiae
ATCC 13813]
gi|319745106|gb|EFV97431.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus agalactiae
ATCC 13813]
Length = 357
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW------FKCLSHKWKRT 72
K+K +Y D+ D + I++ L+ + + +W FK LS K
Sbjct: 76 TKIKQGGTTY---DIAVPSDYMIDKMIKENLLVKLDHSKIANWDAIGARFKNLSFDPKNK 132
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
++ PY WG + I Y + P + W DLWRPE +I +V+S REVIG L
Sbjct: 133 ----YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIGVGL 184
Query: 133 KYMGASYNSNNIDSQVAGGK 152
+G N+ NI A K
Sbjct: 185 NSLGYGLNTKNISELKAASK 204
>gi|77405839|ref|ZP_00782922.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae H36B]
gi|77175549|gb|EAO78335.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae H36B]
Length = 357
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW------FKCLSHKWKRT 72
K+K +Y D+ D + I++ L+ + + +W FK LS K
Sbjct: 76 TKIKQGGTTY---DIAVPSDYMIDKMIKENLLVKLDHSKIANWDAIGARFKNLSFDPKNK 132
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
++ PY WG + I Y + P + W DLWRPE +I +V+S REVIG L
Sbjct: 133 ----YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIGVGL 184
Query: 133 KYMGASYNSNNIDSQVAGGK 152
+G N+ NI A K
Sbjct: 185 NSLGYGLNTKNISELKAASK 204
>gi|22537266|ref|NP_688117.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae 2603V/R]
gi|77413025|ref|ZP_00789227.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 515]
gi|410594609|ref|YP_006951336.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
agalactiae SA20-06]
gi|421532211|ref|ZP_15978578.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
STIR-CD-17]
gi|22534134|gb|AAM99989.1|AE014242_18 spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 2603V/R]
gi|77160923|gb|EAO72032.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 515]
gi|403642577|gb|EJZ03410.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
STIR-CD-17]
gi|410518248|gb|AFV72392.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
agalactiae SA20-06]
Length = 357
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW------FKCLSHKWKRT 72
K+K +Y D+ D + I++ L+ + + +W FK LS K
Sbjct: 76 TKIKQGGTTY---DIAVPSDYMIDKMIKENLLVKLDHSKIANWDAIGARFKNLSFDPKNK 132
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
++ PY WG + I Y + P + W DLWRPE +I +V+S REVIG L
Sbjct: 133 ----YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIGVGL 184
Query: 133 KYMGASYNSNNIDSQVAGGK 152
+G N+ NI A K
Sbjct: 185 NSLGYGLNTKNISELKAASK 204
>gi|417005447|ref|ZP_11944040.1| spermidine/putrescine-binding protein [Streptococcus agalactiae FSL
S3-026]
gi|341577260|gb|EGS27668.1| spermidine/putrescine-binding protein [Streptococcus agalactiae FSL
S3-026]
Length = 357
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW------FKCLSHKWKRT 72
K+K +Y D+ D + I++ L+ + + +W FK LS K
Sbjct: 76 TKIKQGGTTY---DIAVPSDYMIDKMIKENLLVKLDHSKIANWDAIGARFKNLSFDPKNK 132
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
++ PY WG + I Y + P + W DLWRPE +I +V+S REVIG L
Sbjct: 133 ----YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIGVGL 184
Query: 133 KYMGASYNSNNIDSQVAGGK 152
+G N+ NI A K
Sbjct: 185 NSLGYGLNTKNISELKAASK 204
>gi|25011226|ref|NP_735621.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae NEM316]
gi|76797917|ref|ZP_00780179.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 18RS21]
gi|77408716|ref|ZP_00785448.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae COH1]
gi|77410532|ref|ZP_00786893.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae CJB111]
gi|421147260|ref|ZP_15606950.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
GB00112]
gi|23095650|emb|CAD46834.1| Unknown [Streptococcus agalactiae NEM316]
gi|76586754|gb|EAO63250.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 18RS21]
gi|77163480|gb|EAO74430.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae CJB111]
gi|77172691|gb|EAO75828.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae COH1]
gi|401685938|gb|EJS81928.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
GB00112]
Length = 357
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW------FKCLSHKWKRT 72
K+K +Y D+ D + I++ L+ + + +W FK LS K
Sbjct: 76 TKIKQGGTTY---DIAVPSDYMIDKMIKENLLVKLDHSKIANWDAIGARFKNLSFDPKNK 132
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
++ PY WG + I Y + P + W DLWRPE +I +V+S REVIG L
Sbjct: 133 ----YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIGVGL 184
Query: 133 KYMGASYNSNNIDSQVAGGK 152
+G N+ NI A K
Sbjct: 185 NSLGYGLNTKNISELKAASK 204
>gi|108805698|ref|YP_645635.1| extracellular solute-binding protein [Rubrobacter xylanophilus DSM
9941]
gi|108766941|gb|ABG05823.1| extracellular solute-binding protein, family 1 [Rubrobacter
xylanophilus DSM 9941]
Length = 363
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 19/150 (12%)
Query: 20 KVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW------FKCLSHKWKRTR 73
K++A Y D++ D + + +I+P+ G+ ++ F+ L + +
Sbjct: 86 KLQAGGTGY---DVIVPSDYMVEIMAKSEVIQPLDRGKIPNFKNVGENFRGLPYDPENR- 141
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
++ PY+WG I Y + ++ ++ W +W PE G+I+M+N RE IG+ L
Sbjct: 142 ---YSVPYQWGTTGILYNRK-----EIGEVDSWDAMWNPEFKGKIAMLNDVRETIGAALM 193
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALLQ 163
+G S NS + D ++A + ++++ LL+
Sbjct: 194 RLGYSINSTDPD-ELAEAEESLKEQKPLLR 222
>gi|76787391|ref|YP_329814.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae A909]
gi|406709561|ref|YP_006764287.1| spermidine/putrescine ABC transporter substrate-binding protein
[Streptococcus agalactiae GD201008-001]
gi|424049369|ref|ZP_17786920.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
ZQ0910]
gi|76562448|gb|ABA45032.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae A909]
gi|389649040|gb|EIM70525.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
ZQ0910]
gi|406650446|gb|AFS45847.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae GD201008-001]
Length = 357
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW------FKCLSHKWKRT 72
K+K +Y D+ D + I++ L+ + + +W FK LS K
Sbjct: 76 TKIKQGGTTY---DIAVPSDYMIDKMIKENLLVKLDHSKIANWDAIGARFKNLSFDPKNK 132
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
++ PY WG + I Y + P + W DLWRPE +I +V+S REVIG L
Sbjct: 133 ----YSIPYFWGTVGIVYNDQLVK----TPPKYWDDLWRPEFRNKIMLVDSAREVIGVGL 184
Query: 133 KYMGASYNSNNIDSQVAGGK 152
+G N+ NI A K
Sbjct: 185 NSLGYGLNTKNISELKAASK 204
>gi|456012794|gb|EMF46482.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Planococcus halocryophilus Or1]
Length = 358
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + IA+ + E W DLW P L + +V+S RE+IG L
Sbjct: 129 GNEYSIPYFWGTVGIAFNPTLLEGQTF---ESWDDLWNPSLEQEVILVDSAREIIGLGLN 185
Query: 134 YMGASYNSNNIDS 146
+G S NS N+D
Sbjct: 186 SLGYSLNSTNVDE 198
>gi|424513096|emb|CCO66680.1| periplasmic polyamine-binding protein of ABC transporter
[Bathycoccus prasinos]
Length = 572
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 20/125 (16%)
Query: 37 GDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK-------RT---------RGKIWAAP 80
GD +L AI ++LI P + WF+ L +K RT G+++A P
Sbjct: 269 GDAYLKAAIREKLILPFEITGKERWFRALPDVYKNLCFRDYRTGDIVRSTDPNGRLFAVP 328
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGR--ISMVNSPREVIGSVLKYMGAS 138
YR A ++AY+ K + + I DW D++ P + + ++PREV+ + LK MG
Sbjct: 329 YRVTATLLAYRADKLPR-GVEAITDWTDVFDPRFGNKTFVGCADAPREVLSAALK-MGDP 386
Query: 139 YNSNN 143
N+ N
Sbjct: 387 RNTIN 391
>gi|293374080|ref|ZP_06620416.1| bacterial extracellular solute-binding protein [Turicibacter
sanguinis PC909]
gi|292647287|gb|EFF65261.1| bacterial extracellular solute-binding protein [Turicibacter
sanguinis PC909]
Length = 348
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 4 CASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFK 63
C ++++ + K+KA +Y D+ D + I++ L+ P+ + + F+
Sbjct: 50 CKVYYELYDSNETMYQKIKAGGTNY---DVAFPSDYMVEKMIKENLVLPLDYSKIPN-FE 105
Query: 64 CLSHKWKR---TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISM 120
+S +K ++ PY WG + I Y K+ ++ P++ W LW + G I M
Sbjct: 106 YISDAYKNLPYDPDNLYTVPYFWGTVGILYDKTVVKE----PVDSWSILWDEDYKGNIFM 161
Query: 121 VNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
+S R+ + LK +G S N+ NID ++ + Q
Sbjct: 162 YDSQRDSLMVALKLLGYSMNTQNIDELEQAKQLLIDQ 198
>gi|313889474|ref|ZP_07823122.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus pseudoporcinus SPIN 20026]
gi|416851513|ref|ZP_11908658.1| ABC transporter, solute-binding protein [Streptococcus
pseudoporcinus LQ 940-04]
gi|313122306|gb|EFR45397.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus pseudoporcinus SPIN 20026]
gi|356739002|gb|EHI64234.1| ABC transporter, solute-binding protein [Streptococcus
pseudoporcinus LQ 940-04]
Length = 357
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + KH AP + WKDLWRPE +I +V+ RE++G L G
Sbjct: 133 YSIPYFWGTVGIVYNDQQV-KH--AP-KHWKDLWRPEYKDKIMLVDGAREMLGVGLTTFG 188
Query: 137 ASYNSNNIDSQVAGGK 152
S NS N+D A K
Sbjct: 189 NSVNSKNMDQLKAAEK 204
>gi|433448387|ref|ZP_20411319.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella ceti NC36]
gi|429539858|gb|ELA07892.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella ceti NC36]
Length = 364
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSH------KWKR 71
F K+K SY D+ + +S ++EP+ D K L + K
Sbjct: 81 FTKIKQGGTSY---DIAVPSEYMVSKMTNADMLEPL----DYSRLKGLDNLDENFLKQDF 133
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y D I+ W DLWRPE +I +V+S R+++G
Sbjct: 134 DPKNTYSLPYFWGTLGIVYNDQMV---DGNKIKTWNDLWRPEFKKKIMLVDSARDILGMT 190
Query: 132 LKYMGASYNSNNI-DSQVAGGKVAV 155
L GAS N+ N+ + A GK+A
Sbjct: 191 LVSNGASVNTKNLPELAAADGKLAT 215
>gi|357239072|ref|ZP_09126408.1| ABC transporter, solute-binding protein [Streptococcus ictaluri
707-05]
gi|356752794|gb|EHI69919.1| ABC transporter, solute-binding protein [Streptococcus ictaluri
707-05]
Length = 357
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + D AP+ W+DLWRPE +I +++ RE++G L +G
Sbjct: 133 YSIPYFWGTVGIVYND---KLVDKAPLH-WEDLWRPEYKNQIMLIDGAREMLGVGLTTLG 188
Query: 137 ASYNSNNIDSQVAGGK 152
S NS N+D A K
Sbjct: 189 HSVNSKNLDHLQAAEK 204
>gi|375089101|ref|ZP_09735437.1| hypothetical protein HMPREF9703_01519 [Dolosigranulum pigrum ATCC
51524]
gi|374560902|gb|EHR32255.1| hypothetical protein HMPREF9703_01519 [Dolosigranulum pigrum ATCC
51524]
Length = 357
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + D P+ W+DLWRPE I +V+ REV+G L +G
Sbjct: 133 YSIPYLWGTVGIVYNEQLV---DQVPMH-WEDLWRPEYENSIMLVDGAREVMGIGLTTLG 188
Query: 137 ASYNSNNID 145
S NS NID
Sbjct: 189 YSVNSKNID 197
>gi|354586089|ref|ZP_09004762.1| extracellular solute-binding protein family 1 [Paenibacillus lactis
154]
gi|353183065|gb|EHB48597.1| extracellular solute-binding protein family 1 [Paenibacillus lactis
154]
Length = 350
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 1 MNLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQD 60
N+ + D NN L K+KA + Y DL+ D + IE L+EP+ +
Sbjct: 54 FNVKVTYDNYANNEDL-LAKIKAGGSGY---DLIQPSDYMVKTMIEGDLLEPLDMNNIPN 109
Query: 61 WFKCLSHKWKRTR---GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGR 117
F +S +K G ++ Y G IAY K K+ K + I W+DLW PE G+
Sbjct: 110 -FVNISETFKNPSFDPGNKYSIVYTSGVTGIAYNK-KYVKDE---INSWEDLWNPEYKGK 164
Query: 118 ISMVNSPREVIGSVLKYMGASYNSNNIDSQV 148
+ +++ RE+IG LK G S NS ++++
Sbjct: 165 VLLLDDNREMIGMALKKQGKS-NSTTDEAEI 194
>gi|219685706|ref|ZP_03540519.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia garinii Far04]
gi|219672756|gb|EED29782.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia garinii Far04]
Length = 348
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNFYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNEKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N NNID G++ QN L+
Sbjct: 174 KLGYSINENNIDKIKEAGELLKIQNPLLI 202
>gi|386854041|ref|YP_006203326.1| Spermidine/putrescine ABC transporter, binding periplasmic protein
[Borrelia garinii BgVir]
gi|408671248|ref|YP_006871319.1| spermidine/putrescine ABC transporter, binding protein [Borrelia
garinii NMJW1]
gi|365194075|gb|AEW68973.1| PotD [Borrelia garinii BgVir]
gi|407241070|gb|AFT83953.1| spermidine/putrescine ABC transporter, binding protein [Borrelia
garinii NMJW1]
Length = 348
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNFYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNEKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N NNID G++ QN L+
Sbjct: 174 KLGYSINENNIDKIKEAGELLKIQNPLLI 202
>gi|51598894|ref|YP_073082.1| spermidine/putrescine ABC transporter, binding periplasmic protein
[Borrelia garinii PBi]
gi|51573465|gb|AAU07490.1| spermidine/putrescine ABC transporter, binding periplasmic protein
[Borrelia garinii PBi]
Length = 348
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNFYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNEKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N NNID G++ QN L+
Sbjct: 174 KLGYSINENNIDKIKEAGELLKIQNPLLI 202
>gi|219684414|ref|ZP_03539358.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia garinii PBr]
gi|219672403|gb|EED29456.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia garinii PBr]
Length = 348
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNFYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNEKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N NNID G++ QN L+
Sbjct: 174 KLGYSINENNIDKIKEAGELLKIQNPLLI 202
>gi|167758404|ref|ZP_02430531.1| hypothetical protein CLOSCI_00744 [Clostridium scindens ATCC 35704]
gi|167664301|gb|EDS08431.1| ABC transporter, solute-binding protein [Clostridium scindens ATCC
35704]
Length = 628
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K+ + PI+ W LW + I M +S R+ G LKY+G
Sbjct: 405 YSVPYCWGTVGILYNKTMVDE----PIDSWSVLWDEKYKDNILMQDSVRDAFGVTLKYLG 460
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D A K+ ++Q
Sbjct: 461 YSLNSTDLDELEAAKKLLIKQ 481
>gi|336422449|ref|ZP_08602593.1| hypothetical protein HMPREF0993_01970 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336008375|gb|EGN38393.1| hypothetical protein HMPREF0993_01970 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 628
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K+ + PI+ W LW + I M +S R+ G LKY+G
Sbjct: 405 YSVPYCWGTVGILYNKTMVDE----PIDSWSVLWDEKYKDNILMQDSVRDAFGVTLKYLG 460
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D A K+ ++Q
Sbjct: 461 YSLNSTDLDELEAAKKLLIKQ 481
>gi|389820015|ref|ZP_10209562.1| spermidine/putrescine-binding periplasmic protein [Planococcus
antarcticus DSM 14505]
gi|388463070|gb|EIM05445.1| spermidine/putrescine-binding periplasmic protein [Planococcus
antarcticus DSM 14505]
Length = 358
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 17/115 (14%)
Query: 42 SFAIEK----RLIEPIAGGEDQDWFKCLSH------KWKRTRGKIWAAPYRWGAMMIAYK 91
+AIEK L++PI D D L + G ++ PY WG + IA+
Sbjct: 91 EYAIEKMKENNLLQPI----DHDLIPNLQNIDPYFLDLPFDPGNEYSVPYFWGTVGIAFN 146
Query: 92 KSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDS 146
+ E W DLW P L + +V+S REVIG L +G S NS ++D
Sbjct: 147 PTLLEGQTF---ESWDDLWDPTLQQEVILVDSAREVIGMGLNSLGYSLNSTDMDE 198
>gi|374855306|dbj|BAL58166.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
Length = 352
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 27/155 (17%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKIW- 77
NK++A Y D++ D + +E + + + D +H R RG +
Sbjct: 70 NKLQAGVTGY---DIIVPSD----YTVEALIRQGLLAELDLQRIPNSAHIAPRFRGLYYD 122
Query: 78 -----AAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE----LAGRISMVNSPREVI 128
+ PY WG I Y K P W DL+ P+ R+SM++ PRE I
Sbjct: 123 PQNRYSIPYLWGTTGIGYNAQKLE----TPPTSWADLFEPDRLERYKNRVSMLDDPREAI 178
Query: 129 GSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQ 163
G+ LKY+G Y+ N+ D Q ++ +NL L+Q
Sbjct: 179 GAALKYLG--YSVNSTDPQ----QLEAAKNLLLVQ 207
>gi|139473800|ref|YP_001128516.1| spermidine/putrescine extracellular binding protein [Streptococcus
pyogenes str. Manfredo]
gi|134272047|emb|CAM30286.1| spermidine/putrescine extracellular binding protein [Streptococcus
pyogenes str. Manfredo]
Length = 357
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 18/146 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ D + I+K + E + D+ + H K GK
Sbjct: 75 YTKIKQGGTTY---DIAVPSD----YTIDKMIKEDLLIKLDKSKLVGMEHIGKEFLGKSF 127
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 128 DPHNDYSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREMLGVG 183
Query: 132 LKYMGASYNSNNIDSQVAGGKVAVQQ 157
L G S NS N++ Q+ + +QQ
Sbjct: 184 LTTFGYSVNSKNLE-QLQAAERKLQQ 208
>gi|374853292|dbj|BAL56204.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
gi|374857069|dbj|BAL59922.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
Length = 352
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 27/155 (17%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKIW- 77
NK++A Y D++ D + +E + + + D +H R RG +
Sbjct: 70 NKLQAGVTGY---DIIVPSD----YTVEALIRQGLLAELDLQKIPNSAHIAPRFRGLYYD 122
Query: 78 -----AAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE----LAGRISMVNSPREVI 128
+ PY WG I Y K P W DL+ P+ R+SM++ PRE I
Sbjct: 123 PQNRYSIPYLWGTTGIGYNAQKLE----TPPTSWADLFEPDRLERYKNRVSMLDDPREAI 178
Query: 129 GSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQ 163
G+ LKY+G Y+ N+ D Q ++ +NL L+Q
Sbjct: 179 GAALKYLG--YSVNSTDPQ----QLEAAKNLLLVQ 207
>gi|313884789|ref|ZP_07818543.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619988|gb|EFR31423.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Eremococcus
coleocola ACS-139-V-Col8]
Length = 358
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y S + I DW DLW P G+I M++ RE+IG L+ +G
Sbjct: 132 YSVPYFWGTLGIIYNTSMIEE---GSIRDWADLWNPAYQGKILMIDGAREMIGIGLQSLG 188
Query: 137 ASYNSNNIDS 146
Y+ N+IDS
Sbjct: 189 --YSLNDIDS 196
>gi|414082499|ref|YP_006991199.1| bacterial extracellular solute-binding family protein
[Carnobacterium maltaromaticum LMA28]
gi|412996075|emb|CCO09884.1| bacterial extracellular solute-binding family protein
[Carnobacterium maltaromaticum LMA28]
Length = 357
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF K + ++ W DLW P+LA + +++ REVIG L +G
Sbjct: 132 FSIPYFWGTLGIIYN-DKFVKEE--EMQHWDDLWNPKLANNVMLIDGAREVIGLSLNSLG 188
Query: 137 ASYNSNNIDSQVAGG 151
S NS N+ A
Sbjct: 189 YSLNSKNMQQLTAAS 203
>gi|392531710|ref|ZP_10278847.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Carnobacterium maltaromaticum ATCC 35586]
Length = 357
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF K + ++ W DLW P+LA + +++ REVIG L +G
Sbjct: 132 FSIPYFWGTLGIIYN-DKFVKEE--EMQHWDDLWNPKLANNVMLIDGAREVIGLSLNSLG 188
Query: 137 ASYNSNNIDSQVAGG 151
S NS N+ A
Sbjct: 189 YSLNSKNMQQLTAAS 203
>gi|163790907|ref|ZP_02185331.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Carnobacterium
sp. AT7]
gi|159873860|gb|EDP67940.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Carnobacterium
sp. AT7]
Length = 357
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF + D I+ W DLW PEL + +++ RE+IG L G
Sbjct: 132 FSIPYFWGTLGIIYN-DKFVEED--AIQHWDDLWNPELKNEVMLIDGAREIIGLALDSEG 188
Query: 137 ASYNSNNIDSQVAGGK 152
S NS D A K
Sbjct: 189 NSLNSKEDDQLAAAAK 204
>gi|157375531|ref|YP_001474131.1| spermidine/putrescine-binding periplasmic protein [Shewanella
sediminis HAW-EB3]
gi|157317905|gb|ABV37003.1| spermidine/putrescine-binding periplasmic protein [Shewanella
sediminis HAW-EB3]
Length = 358
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 61 WFKCLSHKWKRT-RGKI-WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP--ELAG 116
+ + LS KW+ G + +A PY WG + I Y+ ++ PI WK L+ P +L G
Sbjct: 115 FLEQLSPKWRSAFPGAVEYAIPYFWGTVGIVYRHDVIKE----PITHWKQLYSPAPDLKG 170
Query: 117 RISMVNSPREVIGSVLKYMGASYNS 141
++ M++ PR++IG LK +G S NS
Sbjct: 171 KLGMIDEPRDLIGMGLKSLGYSANS 195
>gi|225570462|ref|ZP_03779487.1| hypothetical protein CLOHYLEM_06563 [Clostridium hylemonae DSM
15053]
gi|225160659|gb|EEG73278.1| hypothetical protein CLOHYLEM_06563 [Clostridium hylemonae DSM
15053]
Length = 626
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K + PI+ W LW I M +S R+ G LKY+G
Sbjct: 403 YSVPYTWGTVGILYNKKMVDE----PIDSWSVLWDETYKDSILMQDSVRDAFGITLKYLG 458
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D A K+ ++Q
Sbjct: 459 YSLNSTDLDELEAAKKLLIEQ 479
>gi|392987511|ref|YP_006486104.1| spermidine/putrescine ABC transporter substrate-binding protein
[Enterococcus hirae ATCC 9790]
gi|392334931|gb|AFM69213.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Enterococcus hirae ATCC 9790]
Length = 359
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F K + I+ W DLW+P+L + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKVFNKEE---IQHWNDLWKPKLRDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNID 145
S NS +D
Sbjct: 189 YSLNSKEMD 197
>gi|226324583|ref|ZP_03800101.1| hypothetical protein COPCOM_02367 [Coprococcus comes ATCC 27758]
gi|225207031|gb|EEG89385.1| ABC transporter, solute-binding protein [Coprococcus comes ATCC
27758]
Length = 627
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K+ + PI+ W LW P+ I M +S R+ G LKY+G
Sbjct: 404 YSVPYCWGTVGILYNKTMVDE----PIDSWSVLWDPKYKDSILMQDSVRDAFGVTLKYLG 459
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D + ++Q
Sbjct: 460 YSLNSTDLDELNEAKNLLIKQ 480
>gi|255527860|ref|ZP_05394707.1| extracellular solute-binding protein family 1 [Clostridium
carboxidivorans P7]
gi|255508442|gb|EET84835.1| extracellular solute-binding protein family 1 [Clostridium
carboxidivorans P7]
Length = 363
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY G MI Y K + I+ +KDLW PEL G + +V+ R VIG L
Sbjct: 138 KGNKYSIPYTLGTQMIVYNPDKIK----TDIKGYKDLWNPELKGSMVLVDDSRIVIGMTL 193
Query: 133 KYMGASYNSNN 143
K +G S N +
Sbjct: 194 KKLGYSMNETD 204
>gi|431586472|ref|ZP_19520987.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1861]
gi|430593650|gb|ELB31636.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1861]
Length = 357
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F D I+ W DLW+PEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKFF---DADQIQHWDDLWKPELKDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNI 144
S NS N+
Sbjct: 189 YSLNSKNM 196
>gi|298492376|ref|YP_003722553.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
0708]
gi|298234294|gb|ADI65430.1| extracellular solute-binding protein family 1 ['Nostoc azollae'
0708]
Length = 363
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKY 134
++ P+ WG + Y K P EDW+ LWR + L R++++N REV+G+ LK
Sbjct: 141 YSIPFNWGTTGLLYNSEKLT----TPPEDWEYLWRNQDKLYKRMTLLNDVREVMGATLKM 196
Query: 135 MGASYNSNN 143
+G SYNS N
Sbjct: 197 LGYSYNSQN 205
>gi|424762359|ref|ZP_18189868.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis TX1337RF]
gi|402424979|gb|EJV57139.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium TX1337RF]
Length = 357
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F D I+ W DLW+PEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKFF---DADQIQHWDDLWKPELKDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNI 144
S NS N+
Sbjct: 189 YSLNSKNM 196
>gi|284047717|ref|YP_003398056.1| extracellular solute-binding protein [Acidaminococcus fermentans
DSM 20731]
gi|283951938|gb|ADB46741.1| extracellular solute-binding protein family 1 [Acidaminococcus
fermentans DSM 20731]
Length = 353
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 4 CASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPI---AGGEDQD 60
C +F N K++A A Y DL+ D +S I+ ++E + A +
Sbjct: 59 CRVNYDVFANNEELLAKIQAGGAQY---DLIQPSDYMVSTMIKLGMLEKLDKDALPNTRH 115
Query: 61 WFKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISM 120
L H RG+ ++ Y WG I Y K K+ P W DLW P GR+ +
Sbjct: 116 MMDTLQHPQFDPRGE-YSVVYTWGMTGIIYNK----KYVKTPPTSWNDLWDPAYKGRVIL 170
Query: 121 VNSPREVIGSVLKYMGASYNSNNID 145
+N REV G LK G S NS + D
Sbjct: 171 LNDSREVFGMALKKNGWSNNSTDPD 195
>gi|257892893|ref|ZP_05672546.1| extracellular solute-binding protein [Enterococcus faecium
1,231,408]
gi|257829272|gb|EEV55879.1| extracellular solute-binding protein [Enterococcus faecium
1,231,408]
Length = 357
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F D I+ W DLW+PEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKFF---DADQIQHWDDLWKPELKDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNI 144
S NS N+
Sbjct: 189 YSLNSKNM 196
>gi|357050375|ref|ZP_09111575.1| hypothetical protein HMPREF9478_01558 [Enterococcus saccharolyticus
30_1]
gi|355381460|gb|EHG28584.1| hypothetical protein HMPREF9478_01558 [Enterococcus saccharolyticus
30_1]
Length = 357
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 17/140 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------ 71
F K++ SY D+ + + +E+ L++P+ D K L + R
Sbjct: 74 FTKIQQGGTSY---DIAIPSEYMIQKMMEEHLLKPL----DHSKIKGLDNIDPRFLDLSF 126
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y F + I++W DLW+PEL I +++ REVIG
Sbjct: 127 DPDNRYSIPYFWGTLGIVYNDKFFAE---GEIKEWDDLWKPELKDSIMLIDGAREVIGLG 183
Query: 132 LKYMGASYNSNNIDSQVAGG 151
L +G S NS + D Q+
Sbjct: 184 LNSLGYSLNSKD-DKQLTAA 202
>gi|227552152|ref|ZP_03982201.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecium
TX1330]
gi|257895258|ref|ZP_05674911.1| extracellular solute-binding protein [Enterococcus faecium Com12]
gi|227178734|gb|EEI59706.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecium
TX1330]
gi|257831823|gb|EEV58244.1| extracellular solute-binding protein [Enterococcus faecium Com12]
Length = 357
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F D I+ W DLW+PEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKFF---DADQIQHWDDLWKPELKDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNI 144
S NS N+
Sbjct: 189 YSLNSKNM 196
>gi|257886683|ref|ZP_05666336.1| extracellular solute-binding protein [Enterococcus faecium
1,141,733]
gi|431757287|ref|ZP_19545918.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E3083]
gi|431762558|ref|ZP_19551118.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E3548]
gi|257822737|gb|EEV49669.1| extracellular solute-binding protein [Enterococcus faecium
1,141,733]
gi|430619576|gb|ELB56403.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E3083]
gi|430623607|gb|ELB60286.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E3548]
Length = 357
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F D I+ W DLW+PEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKFF---DADQIQHWDDLWKPELKDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNI 144
S NS N+
Sbjct: 189 YSLNSKNM 196
>gi|425055129|ref|ZP_18458617.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 505]
gi|403034531|gb|EJY45974.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 505]
Length = 357
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F D I+ W DLW+PEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKFF---DADQIQHWDDLWKPELKDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNI 144
S NS N+
Sbjct: 189 YSLNSKNM 196
>gi|293378130|ref|ZP_06624299.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium PC4.1]
gi|292642994|gb|EFF61135.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium PC4.1]
Length = 357
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F D I+ W DLW+PEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKFF---DADQIQHWDDLWKPELKDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNI 144
S NS N+
Sbjct: 189 YSLNSKNM 196
>gi|257870119|ref|ZP_05649772.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
gi|257804283|gb|EEV33105.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
Length = 357
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 17/140 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------ 71
F K++ SY D+ + + +E+ L++P+ D K L + R
Sbjct: 74 FTKIQQGGTSY---DIAIPSEYMIQKMMEEHLLKPL----DHSKIKGLDNIDPRFLDLSF 126
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y F + I++W DLW+PEL I +++ REVIG
Sbjct: 127 DPDNRYSIPYFWGTLGIVYNDKFFAE---GEIKEWDDLWKPELKDSIMLIDGAREVIGLG 183
Query: 132 LKYMGASYNSNNIDSQVAGG 151
L +G S NS + D Q+
Sbjct: 184 LNSLGYSLNSKD-DKQLTAA 202
>gi|93006986|ref|YP_581423.1| extracellular solute-binding protein [Psychrobacter cryohalolentis
K5]
gi|92394664|gb|ABE75939.1| extracellular solute-binding protein, family 1 [Psychrobacter
cryohalolentis K5]
Length = 374
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 62 FKCLSHKWKRTR---GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRI 118
FK L + T+ ++ PY WG+ +A D A + W DLWRPE G++
Sbjct: 131 FKNLDTSFTNTKVDPENKYSIPYMWGSTGLAINGETV---DPATVNSWNDLWRPEYKGQV 187
Query: 119 SMVNSPREVIGSVLKYMGASYNSNNID 145
++N REV G L +G S NS N D
Sbjct: 188 MLMNDMREVFGMALLTLGYSGNSRNPD 214
>gi|224534470|ref|ZP_03675046.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia spielmanii A14S]
gi|224514147|gb|EEF84465.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia spielmanii A14S]
Length = 348
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNLYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNKKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N +NID G++ QN L+
Sbjct: 174 KLGYSINEDNIDKIKEAGELLKIQNPLLI 202
>gi|312902419|ref|ZP_07761625.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0635]
gi|310634089|gb|EFQ17372.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0635]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWHDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|431514111|ref|ZP_19516159.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1634]
gi|430586367|gb|ELB24628.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1634]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F D I+ W DLW+PEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKFF---DADQIKHWDDLWKPELKDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNI 144
S NS N+
Sbjct: 189 YSLNSKNM 196
>gi|55823439|ref|YP_141880.1| spermidine/putrescine ABC transporter periplasmic protein
[Streptococcus thermophilus CNRZ1066]
gi|55739424|gb|AAV63065.1| spermidine/putrescine ABC transporter periplasmic protein
[Streptococcus thermophilus CNRZ1066]
Length = 356
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 62 FKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMV 121
FK LS K ++ PY WG + I Y +K AP + W DLW PE +I MV
Sbjct: 121 FKVLSFD----PNKDYSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMMV 172
Query: 122 NSPREVIGSVLKYMGASYNSNNI 144
+ REVIG L +G S N+ N+
Sbjct: 173 DGAREVIGFSLNSLGYSLNTKNM 195
>gi|408401530|ref|YP_006859493.1| spermidine/putrescine extracellular binding protein [Streptococcus
dysgalactiae subsp. equisimilis RE378]
gi|407967758|dbj|BAM60996.1| spermidine/putrescine extracellular binding protein [Streptococcus
dysgalactiae subsp. equisimilis RE378]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ D + I+K + E + D+ + H K GK
Sbjct: 75 YTKIKQGGTTY---DIAVPSD----YTIDKMIKENLLNKLDKSKLVGMEHIGKEFLGKSF 127
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 128 DPHNDYSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREILGVG 183
Query: 132 LKYMGASYNSNN 143
L G S NS N
Sbjct: 184 LTTFGYSVNSKN 195
>gi|261208789|ref|ZP_05923226.1| extracellular solute-binding protein family 1 [Enterococcus faecium
TC 6]
gi|289566420|ref|ZP_06446847.1| spermidine/putrescine transport system substrate-binding protein
[Enterococcus faecium D344SRF]
gi|293567486|ref|ZP_06678832.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1071]
gi|294614451|ref|ZP_06694367.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1636]
gi|430849128|ref|ZP_19466909.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1185]
gi|260077291|gb|EEW65011.1| extracellular solute-binding protein family 1 [Enterococcus faecium
TC 6]
gi|289161795|gb|EFD09668.1| spermidine/putrescine transport system substrate-binding protein
[Enterococcus faecium D344SRF]
gi|291589795|gb|EFF21597.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1071]
gi|291592759|gb|EFF24352.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1636]
gi|430537974|gb|ELA78273.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1185]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F D I+ W DLW+PEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKFF---DADQIKHWDDLWKPELKDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNI 144
S NS N+
Sbjct: 189 YSLNSKNM 196
>gi|17232535|ref|NP_489083.1| polyamine-binding protein of polyamine ABC transporter [Nostoc sp.
PCC 7120]
gi|17134181|dbj|BAB76742.1| polyamine-binding protein of polyamine ABC transporter [Nostoc sp.
PCC 7120]
Length = 360
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKY 134
++ P+ WG + Y ++ AP EDW+ LWR + L+ R++++N REVIG+VL+
Sbjct: 137 YSIPFNWGTTGLIYNSEILKE---AP-EDWEYLWRNQKLLSKRMTLLNDVREVIGAVLRM 192
Query: 135 MGASYNSNN 143
+G SYNS N
Sbjct: 193 LGYSYNSQN 201
>gi|257883907|ref|ZP_05663560.1| extracellular solute-binding protein [Enterococcus faecium
1,231,501]
gi|257819745|gb|EEV46893.1| extracellular solute-binding protein [Enterococcus faecium
1,231,501]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F D I+ W DLW+PEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKFF---DADQIKHWDDLWKPELKDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNI 144
S NS N+
Sbjct: 189 YSLNSKNM 196
>gi|257897880|ref|ZP_05677533.1| extracellular solute-binding protein [Enterococcus faecium Com15]
gi|293553974|ref|ZP_06674577.1| spermidine/putrescine-binding periplasmic protein [Enterococcus
faecium E1039]
gi|293573072|ref|ZP_06684012.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E980]
gi|406583222|ref|ZP_11058310.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus sp. GMD3E]
gi|406585559|ref|ZP_11060545.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus sp. GMD2E]
gi|406591205|ref|ZP_11065501.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus sp. GMD1E]
gi|416132683|ref|ZP_11597935.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E4452]
gi|425059470|ref|ZP_18462808.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 504]
gi|430819456|ref|ZP_19438110.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0045]
gi|430822968|ref|ZP_19441543.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0120]
gi|430825940|ref|ZP_19444138.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0164]
gi|430828036|ref|ZP_19446166.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0269]
gi|430834355|ref|ZP_19452362.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0679]
gi|430835379|ref|ZP_19453369.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0680]
gi|430838550|ref|ZP_19456496.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0688]
gi|430841896|ref|ZP_19459813.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1007]
gi|430843596|ref|ZP_19461495.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1050]
gi|430852131|ref|ZP_19469866.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1258]
gi|430857695|ref|ZP_19475328.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1552]
gi|430860654|ref|ZP_19478253.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1573]
gi|430865707|ref|ZP_19481282.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1574]
gi|430882950|ref|ZP_19484155.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1575]
gi|430946155|ref|ZP_19485631.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1576]
gi|431002082|ref|ZP_19488673.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1578]
gi|431033456|ref|ZP_19491302.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1590]
gi|431077757|ref|ZP_19495222.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1604]
gi|431112324|ref|ZP_19497700.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1613]
gi|431149596|ref|ZP_19499454.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1620]
gi|431230271|ref|ZP_19502474.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1622]
gi|431251011|ref|ZP_19503945.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1623]
gi|431301493|ref|ZP_19507812.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1626]
gi|431374642|ref|ZP_19510330.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1627]
gi|431415576|ref|ZP_19512379.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1630]
gi|431736969|ref|ZP_19525926.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1972]
gi|431741194|ref|ZP_19530100.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2039]
gi|431742675|ref|ZP_19531560.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2071]
gi|431746668|ref|ZP_19535493.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2134]
gi|431752439|ref|ZP_19541122.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2620]
gi|431759775|ref|ZP_19548385.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E3346]
gi|431764610|ref|ZP_19553147.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E4215]
gi|431767669|ref|ZP_19556116.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1321]
gi|447912149|ref|YP_007393561.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterococcus faecium NRRL B-2354]
gi|257835792|gb|EEV60866.1| extracellular solute-binding protein [Enterococcus faecium Com15]
gi|291601857|gb|EFF32106.1| spermidine/putrescine-binding periplasmic protein [Enterococcus
faecium E1039]
gi|291606865|gb|EFF36247.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E980]
gi|364093225|gb|EHM35516.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E4452]
gi|403034876|gb|EJY46296.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 504]
gi|404457015|gb|EKA03601.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus sp. GMD3E]
gi|404462514|gb|EKA08247.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus sp. GMD2E]
gi|404468086|gb|EKA13115.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus sp. GMD1E]
gi|430440605|gb|ELA50847.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0045]
gi|430442897|gb|ELA52918.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0120]
gi|430445648|gb|ELA55378.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0164]
gi|430484117|gb|ELA61152.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0269]
gi|430485586|gb|ELA62492.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0679]
gi|430489370|gb|ELA65984.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0680]
gi|430491792|gb|ELA68244.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0688]
gi|430493714|gb|ELA70005.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1007]
gi|430497455|gb|ELA73492.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1050]
gi|430542713|gb|ELA82821.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1258]
gi|430546905|gb|ELA86847.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1552]
gi|430552052|gb|ELA91802.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1573]
gi|430552772|gb|ELA92498.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1574]
gi|430556507|gb|ELA96005.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1575]
gi|430558627|gb|ELA98039.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1576]
gi|430562202|gb|ELB01453.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1578]
gi|430564557|gb|ELB03741.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1590]
gi|430566172|gb|ELB05293.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1604]
gi|430569278|gb|ELB08295.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1613]
gi|430574257|gb|ELB13035.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1622]
gi|430575485|gb|ELB14201.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1620]
gi|430578918|gb|ELB17465.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1623]
gi|430580683|gb|ELB19150.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1626]
gi|430583266|gb|ELB21655.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1627]
gi|430589020|gb|ELB27177.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1630]
gi|430599624|gb|ELB37322.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1972]
gi|430601851|gb|ELB39433.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2039]
gi|430607909|gb|ELB45205.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2071]
gi|430608570|gb|ELB45816.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2134]
gi|430613930|gb|ELB50929.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2620]
gi|430625677|gb|ELB62292.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E3346]
gi|430630622|gb|ELB66977.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1321]
gi|430630750|gb|ELB67099.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E4215]
gi|445187858|gb|AGE29500.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterococcus faecium NRRL B-2354]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F D I+ W DLW+PEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKFF---DADQIKHWDDLWKPELKDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNI 144
S NS N+
Sbjct: 189 YSLNSKNM 196
>gi|29377133|ref|NP_816287.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Enterococcus faecalis V583]
gi|227554141|ref|ZP_03984188.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
HH22]
gi|256853954|ref|ZP_05559319.1| spermidine/putrescine ABC transporter [Enterococcus faecalis T8]
gi|257084376|ref|ZP_05578737.1| extracellular solute-binding protein [Enterococcus faecalis Fly1]
gi|257420047|ref|ZP_05597041.1| extracellular solute-binding protein [Enterococcus faecalis T11]
gi|307290343|ref|ZP_07570258.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0411]
gi|422684915|ref|ZP_16743140.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4000]
gi|422701166|ref|ZP_16759007.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1342]
gi|422712163|ref|ZP_16768939.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309A]
gi|422715506|ref|ZP_16772225.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309B]
gi|422720055|ref|ZP_16776678.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0017]
gi|422731739|ref|ZP_16788090.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0645]
gi|422741529|ref|ZP_16795554.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2141]
gi|29344599|gb|AAO82357.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecalis V583]
gi|227176767|gb|EEI57739.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
HH22]
gi|256710897|gb|EEU25940.1| spermidine/putrescine ABC transporter [Enterococcus faecalis T8]
gi|256992406|gb|EEU79708.1| extracellular solute-binding protein [Enterococcus faecalis Fly1]
gi|257161875|gb|EEU91835.1| extracellular solute-binding protein [Enterococcus faecalis T11]
gi|295113614|emb|CBL32251.1| Spermidine/putrescine-binding periplasmic protein [Enterococcus sp.
7L76]
gi|306498536|gb|EFM68038.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0411]
gi|315030300|gb|EFT42232.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4000]
gi|315032776|gb|EFT44708.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0017]
gi|315143826|gb|EFT87842.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2141]
gi|315162146|gb|EFU06163.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0645]
gi|315170420|gb|EFU14437.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1342]
gi|315576248|gb|EFU88439.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309B]
gi|315582893|gb|EFU95084.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309A]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|325845729|ref|ZP_08169009.1| putative spermidine/putrescine ABC transporter [Turicibacter sp.
HGF1]
gi|325488243|gb|EGC90672.1| putative spermidine/putrescine ABC transporter [Turicibacter sp.
HGF1]
Length = 348
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 4 CASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFK 63
C ++++ + K+KA +Y D+ D + I++ L+ P+ + + F+
Sbjct: 50 CKVYYELYDSNETMYQKIKAGGTNY---DVAFPSDYMVEKMIKENLVLPLDYSKIPN-FE 105
Query: 64 CLSHKWKR---TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISM 120
+S +K ++ PY WG + I Y K+ ++ P++ W LW + G I M
Sbjct: 106 YISDAYKNLPYDPDNLYTVPYFWGTVGILYDKTVVKE----PVDSWSILWDEDYKGNIFM 161
Query: 121 VNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
+S R+ + LK +G S NS ++D ++ + Q
Sbjct: 162 YDSQRDSLMVALKLLGYSMNSQDLDQLEEAKQLLIDQ 198
>gi|256963762|ref|ZP_05567933.1| extracellular solute-binding protein [Enterococcus faecalis
HIP11704]
gi|257416832|ref|ZP_05593826.1| extracellular solute-binding protein [Enterococcus faecalis
ARO1/DG]
gi|307271709|ref|ZP_07552980.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0855]
gi|256954258|gb|EEU70890.1| extracellular solute-binding protein [Enterococcus faecalis
HIP11704]
gi|257158660|gb|EEU88620.1| extracellular solute-binding protein [Enterococcus faecalis
ARO1/DG]
gi|306511587|gb|EFM80586.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0855]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|312900019|ref|ZP_07759336.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0470]
gi|311292776|gb|EFQ71332.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0470]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|229549230|ref|ZP_04437955.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis ATCC
29200]
gi|255971945|ref|ZP_05422531.1| extracellular solute-binding protein [Enterococcus faecalis T1]
gi|256957883|ref|ZP_05562054.1| extracellular solute-binding protein [Enterococcus faecalis DS5]
gi|300860252|ref|ZP_07106339.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Enterococcus
faecalis TUSoD Ef11]
gi|312953676|ref|ZP_07772513.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0102]
gi|384519446|ref|YP_005706751.1| Spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis 62]
gi|422693431|ref|ZP_16751445.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0031]
gi|422710807|ref|ZP_16767742.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0027]
gi|422725774|ref|ZP_16782231.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0312]
gi|428767801|ref|YP_007153912.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Enterococcus faecalis str. Symbioflor 1]
gi|229305467|gb|EEN71463.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis ATCC
29200]
gi|255962963|gb|EET95439.1| extracellular solute-binding protein [Enterococcus faecalis T1]
gi|256948379|gb|EEU65011.1| extracellular solute-binding protein [Enterococcus faecalis DS5]
gi|300849291|gb|EFK77041.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Enterococcus
faecalis TUSoD Ef11]
gi|310628514|gb|EFQ11797.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0102]
gi|315035159|gb|EFT47091.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0027]
gi|315151943|gb|EFT95959.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0031]
gi|315159176|gb|EFU03193.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0312]
gi|323481579|gb|ADX81018.1| Spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis 62]
gi|427185974|emb|CCO73198.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Enterococcus faecalis str. Symbioflor 1]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|448492337|ref|ZP_21608868.1| extracellular solute-binding protein [Halorubrum californiensis DSM
19288]
gi|445691462|gb|ELZ43652.1| extracellular solute-binding protein [Halorubrum californiensis DSM
19288]
Length = 394
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRT----R 73
FN + A DL+ D ++ E+ +I+P+ + F+ LS K++
Sbjct: 107 FNALNAGGTG--QYDLIFPSDYMVNVLNEQGMIQPLNLDALPN-FENLSEKFREAPYDPG 163
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
++ PY+WG IAY + + + W+ +W E +G++SM++ RE +G+ LK
Sbjct: 164 EDRFSVPYQWGTSGIAYNEEMVGDIE---VNSWETMWNEEFSGQMSMLDDVRETMGAALK 220
Query: 134 YMGASYNS 141
Y+G S N+
Sbjct: 221 YLGYSLNT 228
>gi|424884182|ref|ZP_18307802.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R497]
gi|425000801|ref|ZP_18412348.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV161]
gi|431638725|ref|ZP_19523352.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1904]
gi|402933671|gb|EJX53087.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R497]
gi|402988483|gb|EJY03489.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV161]
gi|430602204|gb|ELB39783.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1904]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F D I+ W DLW+PEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKFF---DANQIKHWDDLWKPELKDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNI 144
S NS N+
Sbjct: 189 YSLNSKNM 196
>gi|256616843|ref|ZP_05473689.1| extracellular solute-binding protein [Enterococcus faecalis ATCC
4200]
gi|307276893|ref|ZP_07558003.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2134]
gi|421514559|ref|ZP_15961247.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterococcus faecalis ATCC 29212]
gi|256596370|gb|EEU15546.1| extracellular solute-binding protein [Enterococcus faecalis ATCC
4200]
gi|306506316|gb|EFM75476.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2134]
gi|401672347|gb|EJS78817.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterococcus faecalis ATCC 29212]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|69245027|ref|ZP_00603185.1| extracellular solute-binding protein, family 1 [Enterococcus
faecium DO]
gi|257879275|ref|ZP_05658928.1| extracellular solute-binding protein [Enterococcus faecium
1,230,933]
gi|257881907|ref|ZP_05661560.1| extracellular solute-binding protein [Enterococcus faecium
1,231,502]
gi|257890103|ref|ZP_05669756.1| extracellular solute-binding protein [Enterococcus faecium
1,231,410]
gi|260558721|ref|ZP_05830910.1| extracellular solute-binding protein family 1 [Enterococcus faecium
C68]
gi|293563219|ref|ZP_06677672.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1162]
gi|294617946|ref|ZP_06697551.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1679]
gi|294622376|ref|ZP_06701405.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium U0317]
gi|314937331|ref|ZP_07844671.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133a04]
gi|314940973|ref|ZP_07847876.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133C]
gi|314949062|ref|ZP_07852424.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0082]
gi|314953466|ref|ZP_07856382.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133A]
gi|314994155|ref|ZP_07859462.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133B]
gi|314995965|ref|ZP_07861045.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133a01]
gi|383327994|ref|YP_005353878.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium Aus0004]
gi|389867883|ref|YP_006375306.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecium DO]
gi|415891827|ref|ZP_11549822.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E4453]
gi|424790006|ref|ZP_18216608.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium V689]
gi|424794876|ref|ZP_18220797.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium S447]
gi|424819315|ref|ZP_18244434.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R501]
gi|424852782|ref|ZP_18277170.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R499]
gi|424950672|ref|ZP_18365826.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R496]
gi|424953166|ref|ZP_18368147.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R494]
gi|424955741|ref|ZP_18370558.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R446]
gi|424960198|ref|ZP_18374737.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1986]
gi|424963993|ref|ZP_18378137.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1190]
gi|424966295|ref|ZP_18380103.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1140]
gi|424972193|ref|ZP_18385566.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1139]
gi|424974753|ref|ZP_18387969.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1137]
gi|424976470|ref|ZP_18389558.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1123]
gi|424981237|ref|ZP_18393977.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV99]
gi|424983462|ref|ZP_18396046.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV69]
gi|424986373|ref|ZP_18398798.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV38]
gi|424990200|ref|ZP_18402423.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV26]
gi|424994071|ref|ZP_18406030.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV168]
gi|424996558|ref|ZP_18408358.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV165]
gi|425003745|ref|ZP_18415088.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV102]
gi|425006943|ref|ZP_18418097.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV1]
gi|425010230|ref|ZP_18421196.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium E422]
gi|425013643|ref|ZP_18424364.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium E417]
gi|425018135|ref|ZP_18428608.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium C621]
gi|425021006|ref|ZP_18431290.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium C497]
gi|425022734|ref|ZP_18432894.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium C1904]
gi|425030913|ref|ZP_18436069.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 515]
gi|425034529|ref|ZP_18439414.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 514]
gi|425037299|ref|ZP_18441975.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 513]
gi|425042206|ref|ZP_18446559.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 511]
gi|425045556|ref|ZP_18449652.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 510]
gi|425047648|ref|ZP_18451593.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 509]
gi|425051075|ref|ZP_18454759.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 506]
gi|425060081|ref|ZP_18463390.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 503]
gi|430831441|ref|ZP_19449492.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0333]
gi|430846791|ref|ZP_19464645.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1133]
gi|430856058|ref|ZP_19473762.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1392]
gi|431535463|ref|ZP_19517309.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1731]
gi|431747972|ref|ZP_19536736.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2297]
gi|431754001|ref|ZP_19542666.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2883]
gi|431769978|ref|ZP_19558382.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1644]
gi|431774113|ref|ZP_19562426.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2369]
gi|431776951|ref|ZP_19565208.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2560]
gi|431779215|ref|ZP_19567411.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E4389]
gi|431781259|ref|ZP_19569407.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E6012]
gi|431784887|ref|ZP_19572923.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E6045]
gi|68196028|gb|EAN10460.1| extracellular solute-binding protein, family 1 [Enterococcus
faecium DO]
gi|257813503|gb|EEV42261.1| extracellular solute-binding protein [Enterococcus faecium
1,230,933]
gi|257817565|gb|EEV44893.1| extracellular solute-binding protein [Enterococcus faecium
1,231,502]
gi|257826463|gb|EEV53089.1| extracellular solute-binding protein [Enterococcus faecium
1,231,410]
gi|260075180|gb|EEW63493.1| extracellular solute-binding protein family 1 [Enterococcus faecium
C68]
gi|291595755|gb|EFF27043.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1679]
gi|291598136|gb|EFF29239.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium U0317]
gi|291604814|gb|EFF34295.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1162]
gi|313589841|gb|EFR68686.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133a01]
gi|313591422|gb|EFR70267.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133B]
gi|313594499|gb|EFR73344.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133A]
gi|313600205|gb|EFR79048.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133C]
gi|313643282|gb|EFS07862.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133a04]
gi|313644539|gb|EFS09119.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0082]
gi|364093688|gb|EHM35935.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E4453]
gi|378937688|gb|AFC62760.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium Aus0004]
gi|388533132|gb|AFK58324.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecium DO]
gi|402921345|gb|EJX41797.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium V689]
gi|402925446|gb|EJX45586.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium S447]
gi|402926293|gb|EJX46340.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R501]
gi|402932738|gb|EJX52223.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R496]
gi|402933100|gb|EJX52558.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R499]
gi|402939747|gb|EJX58635.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R494]
gi|402947645|gb|EJX65843.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1190]
gi|402947884|gb|EJX66066.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R446]
gi|402948622|gb|EJX66743.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1986]
gi|402955622|gb|EJX73141.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1137]
gi|402955778|gb|EJX73282.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1139]
gi|402956808|gb|EJX74237.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1140]
gi|402964145|gb|EJX80959.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV99]
gi|402969404|gb|EJX85818.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1123]
gi|402971403|gb|EJX87674.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV69]
gi|402976676|gb|EJX92549.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV38]
gi|402980078|gb|EJX95708.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV26]
gi|402980937|gb|EJX96500.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV168]
gi|402988406|gb|EJY03416.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV165]
gi|402991177|gb|EJY05990.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV102]
gi|402996081|gb|EJY10487.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV1]
gi|403000561|gb|EJY14671.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium E417]
gi|403000733|gb|EJY14833.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium E422]
gi|403002903|gb|EJY16836.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium C621]
gi|403007945|gb|EJY21483.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium C497]
gi|403012173|gb|EJY25432.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium C1904]
gi|403016731|gb|EJY29529.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 515]
gi|403020255|gb|EJY32806.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 514]
gi|403022265|gb|EJY34651.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 513]
gi|403024073|gb|EJY36263.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 511]
gi|403026757|gb|EJY38701.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 510]
gi|403033190|gb|EJY44708.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 509]
gi|403038676|gb|EJY49878.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 506]
gi|403042983|gb|EJY53913.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 503]
gi|430481324|gb|ELA58480.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0333]
gi|430538345|gb|ELA78637.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1133]
gi|430545347|gb|ELA85321.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1392]
gi|430595034|gb|ELB32982.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1731]
gi|430614848|gb|ELB51819.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2297]
gi|430619924|gb|ELB56727.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2883]
gi|430634664|gb|ELB70779.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2369]
gi|430636047|gb|ELB72122.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1644]
gi|430639892|gb|ELB75746.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2560]
gi|430642480|gb|ELB78257.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E4389]
gi|430648725|gb|ELB84125.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E6045]
gi|430649620|gb|ELB84988.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E6012]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F D I+ W DLW+PEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKFF---DANQIKHWDDLWKPELKDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNI 144
S NS N+
Sbjct: 189 YSLNSKNM 196
>gi|257421774|ref|ZP_05598764.1| ABC spermidine/putrescine transporter [Enterococcus faecalis X98]
gi|422707167|ref|ZP_16764864.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0043]
gi|257163598|gb|EEU93558.1| ABC spermidine/putrescine transporter [Enterococcus faecalis X98]
gi|315155525|gb|EFT99541.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0043]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|256763281|ref|ZP_05503861.1| extracellular solute-binding protein [Enterococcus faecalis T3]
gi|257081834|ref|ZP_05576195.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol]
gi|257087625|ref|ZP_05581986.1| extracellular solute-binding protein [Enterococcus faecalis D6]
gi|257090787|ref|ZP_05585148.1| extracellular solute-binding protein [Enterococcus faecalis CH188]
gi|422687689|ref|ZP_16745860.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0630]
gi|424672163|ref|ZP_18109144.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis 599]
gi|256684532|gb|EEU24227.1| extracellular solute-binding protein [Enterococcus faecalis T3]
gi|256989864|gb|EEU77166.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol]
gi|256995655|gb|EEU82957.1| extracellular solute-binding protein [Enterococcus faecalis D6]
gi|256999599|gb|EEU86119.1| extracellular solute-binding protein [Enterococcus faecalis CH188]
gi|315579171|gb|EFU91362.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0630]
gi|402357208|gb|EJU91922.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis 599]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|422734632|ref|ZP_16790920.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1341]
gi|315168636|gb|EFU12653.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1341]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|255974999|ref|ZP_05425585.1| extracellular solute-binding protein [Enterococcus faecalis T2]
gi|256961096|ref|ZP_05565267.1| extracellular solute-binding protein [Enterococcus faecalis Merz96]
gi|293384042|ref|ZP_06629936.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis R712]
gi|293386855|ref|ZP_06631425.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis S613]
gi|307285507|ref|ZP_07565646.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0860]
gi|312908008|ref|ZP_07766991.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 512]
gi|312978464|ref|ZP_07790202.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 516]
gi|422729370|ref|ZP_16785771.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0012]
gi|424757827|ref|ZP_18185555.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis R508]
gi|255967871|gb|EET98493.1| extracellular solute-binding protein [Enterococcus faecalis T2]
gi|256951592|gb|EEU68224.1| extracellular solute-binding protein [Enterococcus faecalis Merz96]
gi|291078522|gb|EFE15886.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis R712]
gi|291083689|gb|EFE20652.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis S613]
gi|306502731|gb|EFM71996.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0860]
gi|310626099|gb|EFQ09382.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 512]
gi|311288613|gb|EFQ67169.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 516]
gi|315149971|gb|EFT93987.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0012]
gi|402406292|gb|EJV38850.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis R508]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|227519669|ref|ZP_03949718.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX0104]
gi|424677622|ref|ZP_18114473.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV103]
gi|424680384|ref|ZP_18117191.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV116]
gi|424684841|ref|ZP_18121550.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV129]
gi|424687545|ref|ZP_18124181.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV25]
gi|424690852|ref|ZP_18127381.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV31]
gi|424693828|ref|ZP_18130240.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV37]
gi|424698568|ref|ZP_18134851.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV41]
gi|424701209|ref|ZP_18137385.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV62]
gi|424705404|ref|ZP_18141456.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV63]
gi|424706470|ref|ZP_18142473.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV65]
gi|424717522|ref|ZP_18146812.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV68]
gi|424719423|ref|ZP_18148570.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV72]
gi|424723843|ref|ZP_18152797.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV73]
gi|424728208|ref|ZP_18156820.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV81]
gi|424734849|ref|ZP_18163330.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV85]
gi|424750919|ref|ZP_18178974.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV93]
gi|227072893|gb|EEI10856.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX0104]
gi|402354118|gb|EJU88933.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV103]
gi|402354612|gb|EJU89418.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV116]
gi|402360329|gb|EJU94932.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV129]
gi|402363223|gb|EJU97715.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV31]
gi|402363828|gb|EJU98285.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV25]
gi|402371717|gb|EJV05864.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV41]
gi|402372422|gb|EJV06543.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV62]
gi|402372588|gb|EJV06701.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV37]
gi|402379302|gb|EJV13115.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV63]
gi|402384678|gb|EJV18221.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV68]
gi|402387632|gb|EJV21105.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV65]
gi|402394436|gb|EJV27609.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV81]
gi|402396334|gb|EJV29397.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV72]
gi|402396922|gb|EJV29965.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV73]
gi|402405698|gb|EJV38284.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV85]
gi|402406149|gb|EJV38712.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV93]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|427396635|ref|ZP_18889394.1| hypothetical protein HMPREF9307_01570 [Enterococcus durans
FB129-CNAB-4]
gi|425723305|gb|EKU86196.1| hypothetical protein HMPREF9307_01570 [Enterococcus durans
FB129-CNAB-4]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y F D I+ W DLW+PEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNDKFF---DANQIKHWDDLWKPELKDSLMLIDGAREVMGLSLNSLG 188
Query: 137 ASYNSNNI 144
S NS N+
Sbjct: 189 YSLNSKNM 196
>gi|384513985|ref|YP_005709078.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
OG1RF]
gi|430358128|ref|ZP_19425232.1| ABC spermidine/putrescine transporter [Enterococcus faecalis OG1X]
gi|430366431|ref|ZP_19427499.1| ABC spermidine/putrescine transporter [Enterococcus faecalis M7]
gi|327535874|gb|AEA94708.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
OG1RF]
gi|429513934|gb|ELA03508.1| ABC spermidine/putrescine transporter [Enterococcus faecalis OG1X]
gi|429517073|gb|ELA06542.1| ABC spermidine/putrescine transporter [Enterococcus faecalis M7]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|307270639|ref|ZP_07551930.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4248]
gi|307287531|ref|ZP_07567574.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0109]
gi|397700780|ref|YP_006538568.1| spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis D32]
gi|422693944|ref|ZP_16751949.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4244]
gi|422703511|ref|ZP_16761331.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1302]
gi|306501269|gb|EFM70572.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0109]
gi|306512949|gb|EFM81590.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4248]
gi|315148619|gb|EFT92635.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4244]
gi|315164929|gb|EFU08946.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1302]
gi|397337419|gb|AFO45091.1| spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis D32]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|422724570|ref|ZP_16781046.1| putative spermidine/putrescine-binding periplasmic protein PotD,
partial [Enterococcus faecalis TX2137]
gi|315025577|gb|EFT37509.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2137]
Length = 367
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|229544963|ref|ZP_04433688.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX1322]
gi|229309855|gb|EEN75842.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX1322]
Length = 357
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|257079820|ref|ZP_05574181.1| extracellular solute-binding protein [Enterococcus faecalis JH1]
gi|294779472|ref|ZP_06744868.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis PC1.1]
gi|256987850|gb|EEU75152.1| extracellular solute-binding protein [Enterococcus faecalis JH1]
gi|294453429|gb|EFG21835.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis PC1.1]
Length = 357
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|315644532|ref|ZP_07897664.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
vortex V453]
gi|315280039|gb|EFU43336.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
vortex V453]
Length = 350
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 1 MNLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQD 60
++ + D NN L K+KA + Y DL+ D + IE L+EP+ +
Sbjct: 54 FDVKVTYDNYANNEDL-LAKIKAGGSGY---DLIQPSDYMVKTMIESELLEPLEMNNIPN 109
Query: 61 WFKCLSHKWKRTR---GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGR 117
F ++ +K G ++ Y G IAY K K+ + I+ W DLW PE G+
Sbjct: 110 -FVNITDTFKDPSYDPGNKYSIVYTSGVTGIAYNK----KYVIDEIKSWGDLWNPEYKGK 164
Query: 118 ISMVNSPREVIGSVLKYMGASYNSNN 143
+ +++ RE+IG LK G S +S +
Sbjct: 165 VLLLDDNREMIGMALKKQGKSNSSKD 190
>gi|329927991|ref|ZP_08281995.1| putative spermidine/putrescine ABC transporter [Paenibacillus sp.
HGF5]
gi|328938095|gb|EGG34492.1| putative spermidine/putrescine ABC transporter [Paenibacillus sp.
HGF5]
Length = 350
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 1 MNLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQD 60
++ + D NN L K+KA + Y DL+ D + IE L+EP+ +
Sbjct: 54 FDVKVTYDNYANNEDL-LAKIKAGGSGY---DLIQPSDYMVKTMIESELLEPLDMNNIPN 109
Query: 61 WFKCLSHKWKRTR---GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGR 117
F ++ +K G ++ Y G IAY K K+ K + I W+DLW PE G+
Sbjct: 110 -FVNITDTFKDPSYDPGNKYSIVYTSGVTGIAYNK-KYVKDE---INSWEDLWNPEYKGK 164
Query: 118 ISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGG 151
+ +++ RE+IG LK G S NS+ ++++
Sbjct: 165 VLLLDDNREMIGMALKKQGKS-NSSTDEAEITAA 197
>gi|261404067|ref|YP_003240308.1| family 1 extracellular solute-binding protein [Paenibacillus sp.
Y412MC10]
gi|261280530|gb|ACX62501.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
Y412MC10]
Length = 350
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 1 MNLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQD 60
++ + D NN L K+KA + Y DL+ D + IE L+EP+ +
Sbjct: 54 FDVKVTYDNYANNEDL-LAKIKAGGSGY---DLIQPSDYMVKTMIESELLEPLDMNNIPN 109
Query: 61 WFKCLSHKWKRTR---GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGR 117
F ++ +K G ++ Y G IAY K K+ K + I W+DLW PE G+
Sbjct: 110 -FVNITDTFKDPSYDPGNKYSIVYTSGVTGIAYNK-KYVKDE---INSWEDLWNPEYKGK 164
Query: 118 ISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGG 151
+ +++ RE+IG LK G S NS+ ++++
Sbjct: 165 VLLLDDNREMIGMALKKQGKS-NSSTDEAEITAA 197
>gi|429767047|ref|ZP_19299270.1| putrescine ABC transporter, periplasmic spermidine [Clostridium
celatum DSM 1785]
gi|429182101|gb|EKY23225.1| putrescine ABC transporter, periplasmic spermidine [Clostridium
celatum DSM 1785]
Length = 350
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRT--RGKIWAAPYRWGAMMIA 89
D+ GD + I + +E + + +W + R+ +G +++ PY G + I
Sbjct: 82 DVAVPGDYMVERLIAEDRLEKLDKDKIPNWTQLSEDNLNRSFDQGNVYSLPYMNGTIGII 141
Query: 90 YKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVA 149
Y K ++ PI+ W+ +W PE I +++S R+ IG LK +G S NS N
Sbjct: 142 YNKDIIKE----PIDSWEAMWSPEYKDEIFVLDSQRDAIGMALKKLGYSINSTNSAELEE 197
Query: 150 GGKVAVQQ 157
K ++Q
Sbjct: 198 AKKALIEQ 205
>gi|355673803|ref|ZP_09059278.1| hypothetical protein HMPREF9469_02315 [Clostridium citroniae
WAL-17108]
gi|354814516|gb|EHE99116.1| hypothetical protein HMPREF9469_02315 [Clostridium citroniae
WAL-17108]
Length = 370
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG M I Y + + + W DLW L+G I M NS R+ LK G
Sbjct: 138 YSVPYCWGTMGILYNTKRLEELGVPAPTKWSDLWDERLSGEILMQNSVRDAFTVALKMEG 197
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS N D + +QQ
Sbjct: 198 YSLNSTNPDELAQARDLLIQQ 218
>gi|295092509|emb|CBK78616.1| Spermidine/putrescine-binding periplasmic protein [Clostridium cf.
saccharolyticum K10]
Length = 675
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 35/70 (50%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +A PY WG + I Y + ++ + P W DLW P G I M +S R+ LK
Sbjct: 440 GNRYAVPYTWGTVGILYNTERIKELGVQPPSRWADLWDPAYKGEILMQDSVRDAFMVALK 499
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 500 SLGYSMNSTD 509
>gi|319939309|ref|ZP_08013670.1| spermidine/putrescine ABC transporter [Streptococcus anginosus
1_2_62CV]
gi|319811563|gb|EFW07847.1| spermidine/putrescine ABC transporter [Streptococcus anginosus
1_2_62CV]
Length = 356
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ + +S + +RL+E + D K L + KR +
Sbjct: 74 YTKIKQGGTTY---DIAIPSEYMISKMMSERLLEKL----DHSKIKGLENIGKRFLNQSF 126
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y + AP + W DLWRPE I M++ REV+G
Sbjct: 127 DPKNQYSIPYFWGTLGIVYNTELVKT---AP-KHWSDLWRPEYKNSIMMIDGAREVMGVG 182
Query: 132 LKYMGASYNSNN 143
L +G S NS N
Sbjct: 183 LNALGYSLNSKN 194
>gi|75908519|ref|YP_322815.1| extracellular solute-binding protein [Anabaena variabilis ATCC
29413]
gi|75702244|gb|ABA21920.1| extracellular solute-binding protein, family 1 [Anabaena variabilis
ATCC 29413]
Length = 360
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKY 134
++ P+ WG + Y ++ AP EDW+ LW+ + L+ RI+++N REVIG+VL+
Sbjct: 137 YSIPFNWGTTGLIYNSEILKE---AP-EDWEYLWKNQKLLSKRITLLNDVREVIGAVLRM 192
Query: 135 MGASYNSNN 143
+G SYNS N
Sbjct: 193 LGYSYNSQN 201
>gi|335032423|ref|ZP_08525819.1| putative spermidine/putrescine ABC transporter [Streptococcus
anginosus SK52 = DSM 20563]
gi|333767000|gb|EGL44268.1| putative spermidine/putrescine ABC transporter [Streptococcus
anginosus SK52 = DSM 20563]
Length = 356
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ + +S + +RL+E + D K L + KR +
Sbjct: 74 YTKIKQGGTTY---DIAIPSEYMISKMMSERLLEKL----DHSKIKGLENIGKRFLNQSF 126
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y + AP + W DLWRPE I M++ REV+G
Sbjct: 127 DPKNQYSIPYFWGTLGIVYNTELVKT---AP-KHWSDLWRPEYKNSIMMIDGAREVMGVG 182
Query: 132 LKYMGASYNSNN 143
L +G S NS N
Sbjct: 183 LNALGYSLNSKN 194
>gi|300869344|ref|ZP_07113934.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
gi|300332643|emb|CBN59132.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
Length = 376
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSV 131
G ++ P WG + Y K + PIEDW DLW+ + L+ R++++N REV+G+
Sbjct: 150 GNRYSVPLAWGTTGLIYNTEKIKY----PIEDWDDLWKNQKALSKRMTLLNDLREVMGAA 205
Query: 132 LKYMGASYNSNN 143
L+ +G S N+ N
Sbjct: 206 LRMLGYSLNTTN 217
>gi|153812244|ref|ZP_01964912.1| hypothetical protein RUMOBE_02643 [Ruminococcus obeum ATCC 29174]
gi|149831651|gb|EDM86738.1| ABC transporter, solute-binding protein [Ruminococcus obeum ATCC
29174]
Length = 571
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K + P++ W LW P+ I M +S R+ G LKY+G
Sbjct: 348 YSVPYCWGTVGILYNKMMVDE----PVDSWSILWDPKYKDNILMQDSVRDAFGVTLKYLG 403
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D + ++Q
Sbjct: 404 YSLNSIDLDELTEAKNLLIEQ 424
>gi|332687056|ref|YP_004456830.1| ABC transporter periplasmic spermidine/putrescine-binding protein
PotD [Melissococcus plutonius ATCC 35311]
gi|379727040|ref|YP_005319225.1| ABC transporter periplasmic spermidine/putrescine-binding protein
PotD [Melissococcus plutonius DAT561]
gi|332371065|dbj|BAK22021.1| ABC transporter, periplasmic spermidineputrescine-binding protein
PotD (TC 3.A.1.11.1) [Melissococcus plutonius ATCC
35311]
gi|376317943|dbj|BAL61730.1| ABC transporter periplasmic spermidine/putrescine-binding protein
PotD [Melissococcus plutonius DAT561]
Length = 357
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K ++ + W DLWRPEL + +++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIIYNDKFIEKSNM---QHWDDLWRPELKNNLMLIDGAREVLGFSLNSLG 188
Query: 137 ASYNSNN 143
S NS N
Sbjct: 189 YSLNSKN 195
>gi|336435037|ref|ZP_08614755.1| hypothetical protein HMPREF0988_00340 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336001930|gb|EGN32057.1| hypothetical protein HMPREF0988_00340 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 609
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
+ PY WG + I Y +K ++ P++ W L+ E AG I M NS R+ +K +G
Sbjct: 387 YTVPYFWGTLGILYDTTKVKE----PVDSWDVLFNGEYAGEIIMQNSMRDTYMVAMKALG 442
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NSNN D A + V+Q
Sbjct: 443 YSLNSNNEDEVNAAHDLLVKQ 463
>gi|422697722|ref|ZP_16755654.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1346]
gi|315173742|gb|EFU17759.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1346]
Length = 357
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRPEL + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIKHWDDLWRPELKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|154498143|ref|ZP_02036521.1| hypothetical protein BACCAP_02124 [Bacteroides capillosus ATCC
29799]
gi|150273133|gb|EDN00290.1| ABC transporter, solute-binding protein [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 358
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTR---G 74
++K+ A+Y D+V D ++ IE+ L+ P+ ++ F + K
Sbjct: 68 YSKIAGGGANY---DVVIPSDYMVARLIEEDLVAPL-NFDNIPNFADIDPALKNPAYDPE 123
Query: 75 KIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKY 134
+++ PY WG M + Y + DL W LW + AG I M+++ R+ IG LK
Sbjct: 124 NLYSVPYMWGLMGVIYNTKAVDEADLGS---WDLLWNEKYAGDILMIDNSRDAIGIALKR 180
Query: 135 MGASYNSNNIDSQV 148
+G SYN+ + +SQV
Sbjct: 181 LGCSYNTTD-ESQV 193
>gi|410494614|ref|YP_006904460.1| putrescine-binding periplasmic protein [Streptococcus dysgalactiae
subsp. equisimilis AC-2713]
gi|417753098|ref|ZP_12401247.1| putative spermidine/putrescine ABC transporter [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|333770877|gb|EGL47862.1| putative spermidine/putrescine ABC transporter [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|410439774|emb|CCI62402.1| Putrescine-binding periplasmic protein Flags: Precursor
[Streptococcus dysgalactiae subsp. equisimilis AC-2713]
Length = 357
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ D + I+K + E + D+ + H K GK
Sbjct: 75 YTKIKQGGTTY---DIAVPSD----YTIDKMIKEDLLIKLDKSKLVGMEHIGKEFLGKSF 127
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 128 DPHNDYSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREILGVG 183
Query: 132 LKYMGASYNSNN 143
L G S NS N
Sbjct: 184 LTTFGYSVNSKN 195
>gi|422846543|ref|ZP_16893226.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK72]
gi|325687986|gb|EGD30006.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK72]
Length = 356
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMMIDGAREVMGIGLN 184
Query: 134 YMGASYNSNNIDSQVAGG 151
G S NS + D Q+ G
Sbjct: 185 SDGHSLNSKDAD-QLQGA 201
>gi|422882171|ref|ZP_16928627.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK355]
gi|332360941|gb|EGJ38746.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK355]
Length = 356
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMMIDGAREVMGIGLN 184
Query: 134 YMGASYNSNNID 145
G S NS + D
Sbjct: 185 SDGHSLNSKDAD 196
>gi|422823699|ref|ZP_16871887.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK405]
gi|422826229|ref|ZP_16874408.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK678]
gi|422865608|ref|ZP_16912233.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1058]
gi|324993026|gb|EGC24946.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK405]
gi|324995665|gb|EGC27577.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK678]
gi|327489153|gb|EGF20946.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1058]
Length = 356
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMMIDGAREVMGIGLN 184
Query: 134 YMGASYNSNNID 145
G S NS + D
Sbjct: 185 SDGHSLNSKDAD 196
>gi|422855633|ref|ZP_16902291.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1]
gi|327461294|gb|EGF07625.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1]
Length = 356
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMMIDGAREVMGIGLN 184
Query: 134 YMGASYNSNNID 145
G S NS + D
Sbjct: 185 SDGHSLNSKDAD 196
>gi|417927022|ref|ZP_12570410.1| ABC transporter, solute-binding protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|340764896|gb|EGR87422.1| ABC transporter, solute-binding protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
Length = 357
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ D + I+K + E + D+ + H K GK
Sbjct: 75 YTKIKQGGTTY---DIAVPSD----YTIDKMIKEDLLIKLDKSKLVGMEHIGKEFLGKSF 127
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 128 DPHNDYSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREILGVG 183
Query: 132 LKYMGASYNSNN 143
L G S NS N
Sbjct: 184 LTTFGYSVNSKN 195
>gi|251782280|ref|YP_002996582.1| spermidine/putrescine extracellular binding protein [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
gi|242390909|dbj|BAH81368.1| spermidine/putrescine extracellular binding protein [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
Length = 357
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ D + I+K + E + D+ + H K GK
Sbjct: 75 YTKIKQGGTTY---DIAVPSD----YTIDKMIKEDLLIKLDKSKLVGMEHIGKEFLGKSF 127
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 128 DPHNDYSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREILGVG 183
Query: 132 LKYMGASYNSNN 143
L G S NS N
Sbjct: 184 LTTFGYSVNSKN 195
>gi|422876565|ref|ZP_16923035.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1056]
gi|332361373|gb|EGJ39177.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1056]
Length = 356
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMMIDGAREVMGLGLN 184
Query: 134 YMGASYNSNNID 145
G S NS + D
Sbjct: 185 SDGHSLNSKDAD 196
>gi|422851737|ref|ZP_16898407.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK150]
gi|325694406|gb|EGD36317.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK150]
Length = 356
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMMIDGAREVMGLGLN 184
Query: 134 YMGASYNSNNID 145
G S NS + D
Sbjct: 185 SDGHSLNSKDAD 196
>gi|422871034|ref|ZP_16917527.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1087]
gi|328946188|gb|EGG40333.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1087]
Length = 356
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMMIDGAREVMGLGLN 184
Query: 134 YMGASYNSNNID 145
G S NS + D
Sbjct: 185 SDGHSLNSKDAD 196
>gi|254412638|ref|ZP_05026411.1| Bacterial extracellular solute-binding protein, putative
[Coleofasciculus chthonoplastes PCC 7420]
gi|196180373|gb|EDX75364.1| Bacterial extracellular solute-binding protein, putative
[Coleofasciculus chthonoplastes PCC 7420]
Length = 371
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSV 131
G + P WG + Y + + P EDW LW + +LA R+++VN REV+G+
Sbjct: 145 GNRHSVPVSWGTTGLVYNTQQVQP----PPEDWDYLWVYQQQLAKRMTLVNDVREVMGAA 200
Query: 132 LKYMGASYNSNNID 145
LK +G SYNS N++
Sbjct: 201 LKKLGYSYNSTNVE 214
>gi|291550273|emb|CBL26535.1| Spermidine/putrescine-binding periplasmic protein [Ruminococcus
torques L2-14]
Length = 625
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K + PI+ W LW + I M +S R+ G LKY+G
Sbjct: 402 YSVPYLWGTVGILYNKKMVDE----PIDSWGVLWDEKYKDSILMQDSVRDAFGVALKYLG 457
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D A + ++Q
Sbjct: 458 YSLNSTDLDELQAAKNLLIEQ 478
>gi|398992247|ref|ZP_10695265.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399014630|ref|ZP_10716917.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398110386|gb|EJM00291.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398133067|gb|EJM22308.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 365
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 25/161 (15%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQ---DWFKCLSH 67
F++L K+ + Y DLV LS AIE I+P+ DQ F +
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIESGAIQPL----DQARVPHFAGVGE 111
Query: 68 KWKRTR-----GKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR---- 117
++++ G +A Y WG Y++ ++ AP + W L+ P + +
Sbjct: 112 EFRQHMAVFDPGNRYAGIYAWGTTGFGYQEEAIKQRLPEAPTDSWAMLFDPAVVSKFADC 171
Query: 118 -ISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
+S++N P EV +V+KYMG N N+D K+A QQ
Sbjct: 172 GVSLLNDPNEVFAAVMKYMGLDINRQNLDDL----KLAEQQ 208
>gi|295115321|emb|CBL36168.1| Spermidine/putrescine-binding periplasmic protein
[butyrate-producing bacterium SM4/1]
Length = 543
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +A PY WG + I Y + + + P W DLW P G I M +S R+ LK
Sbjct: 308 GNRYAVPYTWGTVGILYNTKRIEELGVQPPSRWADLWDPAYKGEILMQDSVRDAFMVALK 367
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALLQ 163
+G S NS + G++A ++L + Q
Sbjct: 368 SLGYSMNSTD------EGELAQARDLLIAQ 391
>gi|116628225|ref|YP_820844.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus LMD-9]
gi|386087136|ref|YP_006003010.1| Polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus ND03]
gi|386345215|ref|YP_006041379.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus JIM 8232]
gi|387910236|ref|YP_006340542.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus MN-ZLW-002]
gi|116101502|gb|ABJ66648.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus LMD-9]
gi|312278849|gb|ADQ63506.1| Polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus ND03]
gi|339278676|emb|CCC20424.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus JIM 8232]
gi|387575171|gb|AFJ83877.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus MN-ZLW-002]
Length = 355
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K AP + W DLW PE +I MV+ REVIG L +G
Sbjct: 131 YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMMVDGAREVIGFSLNSLG 186
Query: 137 ASYNSNNI 144
S N+ N+
Sbjct: 187 YSLNTKNM 194
>gi|445381416|ref|ZP_21427083.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5460]
gi|445394349|ref|ZP_21428817.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5461]
gi|444748944|gb|ELW73887.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5461]
gi|444749052|gb|ELW73987.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5460]
Length = 355
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K AP + W DLW PE +I MV+ REVIG L +G
Sbjct: 131 YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMMVDGAREVIGFSLNSLG 186
Query: 137 ASYNSNNI 144
S N+ N+
Sbjct: 187 YSLNTKNM 194
>gi|55821511|ref|YP_139953.1| putrescine/spermidine ABC transporter subtrate-binding protein
[Streptococcus thermophilus LMG 18311]
gi|55737496|gb|AAV61138.1| Polyamine (putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus LMG 18311]
Length = 356
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K AP + W DLW PE +I MV+ REVIG L +G
Sbjct: 132 YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMMVDGAREVIGFSLNSLG 187
Query: 137 ASYNSNNI 144
S N+ N+
Sbjct: 188 YSLNTKNM 195
>gi|15675088|ref|NP_269262.1| spermidine/putrescine ABC transporter periplasmic transport protein
[Streptococcus pyogenes SF370]
gi|21910303|ref|NP_664571.1| spermidine/putrescine ABC transporter (periplasmic transport
protein) [Streptococcus pyogenes MGAS315]
gi|28895879|ref|NP_802229.1| spermidine/putrescine ABC transporter periplasmic protein
[Streptococcus pyogenes SSI-1]
gi|50914173|ref|YP_060145.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS10394]
gi|56808699|ref|ZP_00366420.1| COG0687: Spermidine/putrescine-binding periplasmic protein
[Streptococcus pyogenes M49 591]
gi|71903471|ref|YP_280274.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS6180]
gi|71910642|ref|YP_282192.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS5005]
gi|94988578|ref|YP_596679.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS9429]
gi|94992400|ref|YP_600499.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS2096]
gi|94994376|ref|YP_602474.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS10750]
gi|306827388|ref|ZP_07460675.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus pyogenes
ATCC 10782]
gi|386362650|ref|YP_006071981.1| bacterial extracellular solute-binding family protein
[Streptococcus pyogenes Alab49]
gi|410680501|ref|YP_006932903.1| bacterial extracellular solute-binding family protein
[Streptococcus pyogenes A20]
gi|417856910|ref|ZP_12501969.1| spermidine/putrescine-binding protein [Streptococcus pyogenes HKU
QMH11M0907901]
gi|421893326|ref|ZP_16323860.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Streptococcus pyogenes NS88.2]
gi|13622244|gb|AAK33983.1| putative spermidine/putrescine ABC transporter (periplasmic
transport protein) [Streptococcus pyogenes M1 GAS]
gi|21904499|gb|AAM79374.1| putative spermidine/putrescine ABC transporter (periplasmic
transport protein) [Streptococcus pyogenes MGAS315]
gi|28811129|dbj|BAC64062.1| putative spermidine / putrescine ABC transporter (periplasmic
transport protein) [Streptococcus pyogenes SSI-1]
gi|50903247|gb|AAT86962.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS10394]
gi|71802566|gb|AAX71919.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS6180]
gi|71853424|gb|AAZ51447.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS5005]
gi|94542086|gb|ABF32135.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS9429]
gi|94543962|gb|ABF34010.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS10270]
gi|94545908|gb|ABF35955.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS2096]
gi|94547884|gb|ABF37930.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS10750]
gi|304430535|gb|EFM33557.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus pyogenes
ATCC 10782]
gi|350277059|gb|AEQ24427.1| bacterial extracellular solute-binding family protein
[Streptococcus pyogenes Alab49]
gi|379980924|emb|CCG27582.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Streptococcus pyogenes NS88.2]
gi|387933865|gb|EIK41978.1| spermidine/putrescine-binding protein [Streptococcus pyogenes HKU
QMH11M0907901]
gi|395453877|dbj|BAM30216.1| spermidine/putrescine-binding protein [Streptococcus pyogenes M1
476]
gi|409693090|gb|AFV37950.1| bacterial extracellular solute-binding family protein
[Streptococcus pyogenes A20]
Length = 357
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 18/146 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ D + I+K + E + D+ + + K GK
Sbjct: 75 YTKIKQGGTTY---DIAVPSD----YTIDKMIKENLLNKLDKSKLVGMDNIGKEFLGKSF 127
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 128 DPQNDYSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREMLGVG 183
Query: 132 LKYMGASYNSNNIDSQVAGGKVAVQQ 157
L G S NS N++ Q+ + +QQ
Sbjct: 184 LTTFGYSVNSKNLE-QLQAAERKLQQ 208
>gi|19746056|ref|NP_607192.1| spermidine/putrescine ABC transporter periplasmic protein
[Streptococcus pyogenes MGAS8232]
gi|19748225|gb|AAL97691.1| putative spermidine / putrescine ABC transporter (periplasmic
transport protein) [Streptococcus pyogenes MGAS8232]
Length = 357
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 18/146 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ D + I+K + E + D+ + + K GK
Sbjct: 75 YTKIKQGGTTY---DIAVPSD----YTIDKMIKENLLNKLDKSKLVGMDNIGKEFLGKSF 127
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 128 DPQNDYSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREMLGVG 183
Query: 132 LKYMGASYNSNNIDSQVAGGKVAVQQ 157
L G S NS N++ Q+ + +QQ
Sbjct: 184 LTTFGYSVNSKNLE-QLQAAERKLQQ 208
>gi|383479980|ref|YP_005388874.1| spermidine putrescine ABC transport system substrate-binding
protein PotD [Streptococcus pyogenes MGAS15252]
gi|383493896|ref|YP_005411572.1| spermidine putrescine ABC transport system substrate-binding
protein PotD [Streptococcus pyogenes MGAS1882]
gi|378927970|gb|AFC66176.1| spermidine putrescine ABC transport system substrate-binding
protein PotD [Streptococcus pyogenes MGAS15252]
gi|378929624|gb|AFC68041.1| spermidine putrescine ABC transport system substrate-binding
protein PotD [Streptococcus pyogenes MGAS1882]
Length = 357
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 18/146 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ D + I+K + E + D+ + + K GK
Sbjct: 75 YTKIKQGGTTY---DIAVPSD----YTIDKMIKENLLNKLDKSKLVGMDNIGKEFLGKSF 127
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 128 DPQNDYSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREMLGVG 183
Query: 132 LKYMGASYNSNNIDSQVAGGKVAVQQ 157
L G S NS N++ Q+ + +QQ
Sbjct: 184 LTTFGYSVNSKNLE-QLQAAERKLQQ 208
>gi|422758812|ref|ZP_16812574.1| spermidine/putrescine extracellular binding protein [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
gi|322411647|gb|EFY02555.1| spermidine/putrescine extracellular binding protein [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 357
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ D + I+K + E + D+ + H K GK
Sbjct: 75 YTKIKQGGTTY---DIAVPSD----YTIDKMIKENLLIKLDKSKLVGMEHIGKEFLGKSF 127
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 128 DPHNDYSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREILGVG 183
Query: 132 LKYMGASYNSNN 143
L G S NS N
Sbjct: 184 LTTFGYSVNSKN 195
>gi|332523341|ref|ZP_08399593.1| putative spermidine/putrescine ABC transporter [Streptococcus
porcinus str. Jelinkova 176]
gi|332314605|gb|EGJ27590.1| putative spermidine/putrescine ABC transporter [Streptococcus
porcinus str. Jelinkova 176]
Length = 357
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 17/141 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ D + I+K + E + D+ K + K GK
Sbjct: 75 YTKIKQGGTTY---DIAVPSD----YTIDKMIKENLLVKLDKSKLKGMDAIGKEFLGKSF 127
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y + KH AP + W+DLWRPE +I +++ RE++G
Sbjct: 128 DPKNDYSIPYFWGTVGIVYNDQQV-KH--AP-KHWEDLWRPEYKDKIMLIDGAREMLGIG 183
Query: 132 LKYMGASYNSNNIDSQVAGGK 152
L G S NS N++ A K
Sbjct: 184 LTTFGNSVNSKNMNQLKAAEK 204
>gi|49086268|gb|AAT51340.1| PA1410, partial [synthetic construct]
Length = 364
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDW-------FKCLSHKWKRTRGKIWAAPYRWG 84
DLV D +L ++ + +P+ + +W K L+ K G + PY WG
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVLAGK---DPGNRYVMPYMWG 130
Query: 85 AMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGA 137
IAY K R D AP++ W +++PE + ++ ++SP EVI VL Y+G
Sbjct: 131 TNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGL 190
Query: 138 SYNSN 142
S NS+
Sbjct: 191 SPNSH 195
>gi|116049356|ref|YP_791841.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa UCBPP-PA14]
gi|355645149|ref|ZP_09054039.1| hypothetical protein HMPREF1030_03125 [Pseudomonas sp. 2_1_26]
gi|421175518|ref|ZP_15633196.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa CI27]
gi|115584577|gb|ABJ10592.1| putative periplasmic putrescine-binding permease protein
[Pseudomonas aeruginosa UCBPP-PA14]
gi|354828919|gb|EHF13017.1| hypothetical protein HMPREF1030_03125 [Pseudomonas sp. 2_1_26]
gi|404532111|gb|EKA42030.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa CI27]
Length = 363
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDW-------FKCLSHKWKRTRGKIWAAPYRWG 84
DLV D +L ++ + +P+ + +W K L+ K G + PY WG
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVLAGK---DPGNRYVMPYMWG 130
Query: 85 AMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGA 137
IAY K R D AP++ W +++PE + ++ ++SP EVI VL Y+G
Sbjct: 131 TNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGL 190
Query: 138 SYNSN 142
S NS+
Sbjct: 191 SPNSH 195
>gi|451984912|ref|ZP_21933148.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
gi|451757471|emb|CCQ85671.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
Length = 363
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDW-------FKCLSHKWKRTRGKIWAAPYRWG 84
DLV D +L ++ + +P+ + +W K L+ K G + PY WG
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVLAGK---DPGNRYVMPYMWG 130
Query: 85 AMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGA 137
IAY K R D AP++ W +++PE + ++ ++SP EVI VL Y+G
Sbjct: 131 TNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGL 190
Query: 138 SYNSN 142
S NS+
Sbjct: 191 SPNSH 195
>gi|152984615|ref|YP_001349283.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PA7]
gi|150959773|gb|ABR81798.1| probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PA7]
Length = 363
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDW-------FKCLSHKWKRTRGKIWAAPYRWG 84
DLV D +L ++ + +P+ + +W K L+ K G + PY WG
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVLAGK---DPGNRYVMPYMWG 130
Query: 85 AMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGA 137
IAY K R D AP++ W +++PE + ++ ++SP EVI VL Y+G
Sbjct: 131 TNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGL 190
Query: 138 SYNSN 142
S NS+
Sbjct: 191 SPNSH 195
>gi|15596607|ref|NP_250101.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa PAO1]
gi|107100846|ref|ZP_01364764.1| hypothetical protein PaerPA_01001875 [Pseudomonas aeruginosa PACS2]
gi|218892717|ref|YP_002441586.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa LESB58]
gi|254234510|ref|ZP_04927833.1| hypothetical protein PACG_00369 [Pseudomonas aeruginosa C3719]
gi|254239762|ref|ZP_04933084.1| hypothetical protein PA2G_00387 [Pseudomonas aeruginosa 2192]
gi|313106401|ref|ZP_07792635.1| putative periplasmic putrescine-binding permease protein
[Pseudomonas aeruginosa 39016]
gi|386059782|ref|YP_005976304.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa M18]
gi|386065231|ref|YP_005980535.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa NCGM2.S1]
gi|416862774|ref|ZP_11915133.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 138244]
gi|418583265|ref|ZP_13147335.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa MPAO1/P1]
gi|418593218|ref|ZP_13157070.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa MPAO1/P2]
gi|420136669|ref|ZP_14644704.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa CIG1]
gi|421161841|ref|ZP_15620761.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 25324]
gi|421181616|ref|ZP_15639111.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa E2]
gi|421516044|ref|ZP_15962730.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa PAO579]
gi|9947357|gb|AAG04799.1|AE004570_7 probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PAO1]
gi|126166441|gb|EAZ51952.1| hypothetical protein PACG_00369 [Pseudomonas aeruginosa C3719]
gi|126193140|gb|EAZ57203.1| hypothetical protein PA2G_00387 [Pseudomonas aeruginosa 2192]
gi|218772945|emb|CAW28757.1| probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa LESB58]
gi|310879137|gb|EFQ37731.1| putative periplasmic putrescine-binding permease protein
[Pseudomonas aeruginosa 39016]
gi|334835734|gb|EGM14589.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 138244]
gi|347306088|gb|AEO76202.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa M18]
gi|348033790|dbj|BAK89150.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa NCGM2.S1]
gi|375047485|gb|EHS40031.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa MPAO1/P1]
gi|375047922|gb|EHS40457.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa MPAO1/P2]
gi|403250570|gb|EJY63991.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa CIG1]
gi|404349772|gb|EJZ76109.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa PAO579]
gi|404538515|gb|EKA48046.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 25324]
gi|404543444|gb|EKA52717.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa E2]
gi|453048458|gb|EME96171.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa PA21_ST175]
Length = 363
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDW-------FKCLSHKWKRTRGKIWAAPYRWG 84
DLV D +L ++ + +P+ + +W K L+ K G + PY WG
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVLAGK---DPGNRYVMPYMWG 130
Query: 85 AMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGA 137
IAY K R D AP++ W +++PE + ++ ++SP EVI VL Y+G
Sbjct: 131 TNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGL 190
Query: 138 SYNSN 142
S NS+
Sbjct: 191 SPNSH 195
>gi|296390225|ref|ZP_06879700.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PAb1]
gi|416874544|ref|ZP_11918188.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 152504]
gi|334843128|gb|EGM21722.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 152504]
Length = 363
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDW-------FKCLSHKWKRTRGKIWAAPYRWG 84
DLV D +L ++ + +P+ + +W K L+ K G + PY WG
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVLAGK---DPGNRYVMPYMWG 130
Query: 85 AMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGA 137
IAY K R D AP++ W +++PE + ++ ++SP EVI VL Y+G
Sbjct: 131 TNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGL 190
Query: 138 SYNSN 142
S NS+
Sbjct: 191 SPNSH 195
>gi|357054532|ref|ZP_09115616.1| hypothetical protein HMPREF9467_02588 [Clostridium clostridioforme
2_1_49FAA]
gi|355384504|gb|EHG31569.1| hypothetical protein HMPREF9467_02588 [Clostridium clostridioforme
2_1_49FAA]
Length = 371
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG M I Y + + + W DLW L+G I M NS R+ LK G
Sbjct: 139 YSVPYCWGTMGILYNTKRLEELGVPAPTKWSDLWDERLSGEILMQNSVRDAFTVALKMKG 198
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS N D + ++Q
Sbjct: 199 YSLNSTNSDELAQARDLLIEQ 219
>gi|283796608|ref|ZP_06345761.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium
sp. M62/1]
gi|291076029|gb|EFE13393.1| ABC transporter, solute-binding protein [Clostridium sp. M62/1]
Length = 675
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 34/70 (48%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +A PY WG + I Y + + + P W DLW P G I M +S R+ LK
Sbjct: 440 GNRYAVPYTWGTVGILYNTKRIEELGVQPPSRWADLWDPAYKGEILMQDSVRDAFMVALK 499
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 500 SLGYSMNSTD 509
>gi|116621488|ref|YP_823644.1| ABC transporter substrate-binding protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116224650|gb|ABJ83359.1| extracellular solute-binding protein, family 1 [Candidatus
Solibacter usitatus Ellin6076]
Length = 340
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPI-EDWKDLWRPELAGRISMVNSPREVIGSVLKYM 135
W PY W + Y KS L P + W DLW P+L GR++M++ P +++G+ LK +
Sbjct: 119 WCVPYMWNGTGVVYNKS------LRPAPQRWADLWSPQLKGRLTMLDDPEDMLGACLKKL 172
Query: 136 GASYNSNN 143
S+N+ +
Sbjct: 173 SLSFNATD 180
>gi|392985122|ref|YP_006483709.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa DK2]
gi|419752868|ref|ZP_14279273.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PADK2_CF510]
gi|424940611|ref|ZP_18356374.1| probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa NCMG1179]
gi|346057057|dbj|GAA16940.1| probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa NCMG1179]
gi|384400764|gb|EIE47122.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PADK2_CF510]
gi|392320627|gb|AFM66007.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa DK2]
Length = 363
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDW-------FKCLSHKWKRTRGKIWAAPYRWG 84
DLV D +L ++ + +P+ + +W K L+ K G + PY WG
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVLAGK---DPGNRYVMPYMWG 130
Query: 85 AMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGA 137
IAY K R D AP++ W +++PE + ++ ++SP EVI VL Y+G
Sbjct: 131 TNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGL 190
Query: 138 SYNSN 142
S NS+
Sbjct: 191 SPNSH 195
>gi|354566674|ref|ZP_08985845.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
gi|353544333|gb|EHC13787.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
Length = 361
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWR--PELAGRISMVNSPREVIGSVLKY 134
++ P+ WG + Y + P EDW+ LW+ +L +I+++N REV+G+VLK
Sbjct: 138 YSLPFNWGTTGLIYNSEILKN----PPEDWEYLWQNQQQLNNKITLLNDVREVMGAVLKM 193
Query: 135 MGASYNSNN 143
+G SYNS N
Sbjct: 194 LGYSYNSKN 202
>gi|160936527|ref|ZP_02083894.1| hypothetical protein CLOBOL_01417 [Clostridium bolteae ATCC
BAA-613]
gi|158440318|gb|EDP18063.1| hypothetical protein CLOBOL_01417 [Clostridium bolteae ATCC
BAA-613]
Length = 371
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG M I Y + + + W DLW L+G I M NS R+ LK G
Sbjct: 139 YSVPYCWGTMGILYNTKRLEELGVPAPTKWSDLWDERLSGEILMQNSVRDAFTVALKMKG 198
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS N D + ++Q
Sbjct: 199 YSLNSTNPDELAEARDLLIEQ 219
>gi|421169026|ref|ZP_15627073.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 700888]
gi|404527872|gb|EKA38000.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 700888]
Length = 363
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDW-------FKCLSHKWKRTRGKIWAAPYRWG 84
DLV D +L ++ + +P+ + +W K L+ K G + PY WG
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVLAGK---DPGNRYVMPYMWG 130
Query: 85 AMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGA 137
IAY K R D AP++ W +++PE + ++ ++SP EVI VL Y+G
Sbjct: 131 TNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGL 190
Query: 138 SYNSN 142
S NS+
Sbjct: 191 SPNSH 195
>gi|440682704|ref|YP_007157499.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
gi|428679823|gb|AFZ58589.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
Length = 363
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKY 134
++ P+ WG + Y K P EDW+ LW+ + L R++++N REV+G+ LK
Sbjct: 141 YSIPFNWGTTGLLYNSEKLEN----PPEDWEYLWQNQDKLYKRMTLLNDVREVMGAALKM 196
Query: 135 MGASYNSNN 143
+G SYNS N
Sbjct: 197 LGYSYNSQN 205
>gi|398853301|ref|ZP_10609912.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398240406|gb|EJN26087.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 365
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 27/162 (16%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPI--------AG-GEDQDW 61
F++L K+ + Y DLV LS AIE I+P+ AG GE+
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIESGAIQPLDKARVPHFAGVGEE--- 112
Query: 62 FKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR--- 117
F+ H G +A Y WG + Y++ K AP + W L+ P + +
Sbjct: 113 FR--QHMAAFDPGNRYAGIYAWGTTGVGYQEEAVNKRLPDAPKDSWAMLFDPAVVSKFAD 170
Query: 118 --ISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
+S++N P EV +V+KYMG N N+D K+A QQ
Sbjct: 171 CGVSLLNDPNEVFAAVMKYMGLDINRQNLDEL----KLAEQQ 208
>gi|424922740|ref|ZP_18346101.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404303900|gb|EJZ57862.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 366
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++L K+ + Y DLV LS AIE I+P+ F + +++
Sbjct: 60 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIESGAIQPLDKAR-VPHFSGVGEEFR 115
Query: 71 RTR-----GKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----IS 119
+ G +A Y WG + Y++ ++ AP + W L+ P + + +S
Sbjct: 116 QHMAVFDPGNRFAGIYAWGTTGVGYQEQAIKQRLPEAPTDSWAMLFDPAVVSKFADCGVS 175
Query: 120 MVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
++N P EV +V+KY+G N N+D K+A QQ
Sbjct: 176 LLNDPNEVFAAVMKYLGLDINRQNLDDL----KLAEQQ 209
>gi|421154900|ref|ZP_15614391.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 14886]
gi|404521287|gb|EKA31894.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 14886]
Length = 363
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDW-------FKCLSHKWKRTRGKIWAAPYRWG 84
DLV D +L ++ + +P+ + +W K L+ K G + PY WG
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLLNWKNLNPALLKVLAGK---DPGNRYVMPYMWG 130
Query: 85 AMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGA 137
IAY K R D AP++ W +++PE + ++ ++SP EVI VL Y+G
Sbjct: 131 TNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGL 190
Query: 138 SYNSN 142
S NS+
Sbjct: 191 SPNSH 195
>gi|345887621|ref|ZP_08838790.1| hypothetical protein HMPREF0178_01564 [Bilophila sp. 4_1_30]
gi|345041620|gb|EGW45761.1| hypothetical protein HMPREF0178_01564 [Bilophila sp. 4_1_30]
Length = 345
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG PY WG + + K + D++ I+ WKDL RPE GR+ + + R+ G L
Sbjct: 118 RGNALTIPYMWGTVGLLVNK---KAVDVSTIKSWKDLARPEFKGRVLLSDDLRDTFGVGL 174
Query: 133 KYMGASYNSNNIDS 146
K G S NS N D
Sbjct: 175 KACGYSINSTNPDE 188
>gi|302037133|ref|YP_003797455.1| polyamine ABC transporter periplasmic-binding protein PotD
[Candidatus Nitrospira defluvii]
gi|300605197|emb|CBK41530.1| Polyamine ABC transporter, periplasmic-binding protein PotD
[Candidatus Nitrospira defluvii]
Length = 349
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG++ I Y + P + W LW GRISM+N REV G+VL+ MG
Sbjct: 128 YSIPYLWGSVGIGYDAAVIP----TPPDSWAILWDERYKGRISMLNDQREVFGAVLRSMG 183
Query: 137 ASYNSNNIDSQV 148
S NS D QV
Sbjct: 184 QSMNST--DPQV 193
>gi|239624521|ref|ZP_04667552.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520907|gb|EEQ60773.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 370
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG M I Y + + + W DLW L+G I M NS R+ LK G
Sbjct: 138 YSVPYCWGTMGILYNTKRLEELGVPAPTKWSDLWDERLSGEILMQNSVRDAFTVALKMEG 197
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS N D + ++Q
Sbjct: 198 YSLNSTNPDELAKARDLLIEQ 218
>gi|209559391|ref|YP_002285863.1| spermidine/putrescine ABC transporter substrate-binding protein
[Streptococcus pyogenes NZ131]
gi|209540592|gb|ACI61168.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Streptococcus pyogenes NZ131]
Length = 357
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K AP+ W+DLWRPE I +++ RE++G L G
Sbjct: 133 YSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREMLGVGLTTFG 188
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS N++ Q+ + +QQ
Sbjct: 189 YSVNSKNLE-QLQAAERKLQQ 208
>gi|322385407|ref|ZP_08059052.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus cristatus
ATCC 51100]
gi|417921817|ref|ZP_12565307.1| ABC transporter, solute-binding domain protein [Streptococcus
cristatus ATCC 51100]
gi|321270666|gb|EFX53581.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus cristatus
ATCC 51100]
gi|342833702|gb|EGU67982.1| ABC transporter, solute-binding domain protein [Streptococcus
cristatus ATCC 51100]
Length = 356
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y +K +H AP E W DLW+PE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYN-TKMVEH--AP-EHWNDLWKPEYRNSIMMIDGAREVMGIGLN 184
Query: 134 YMGASYNSNNID 145
G S NS + D
Sbjct: 185 SNGHSLNSKDAD 196
>gi|418965367|ref|ZP_13517142.1| ABC transporter, solute-binding protein [Streptococcus constellatus
subsp. constellatus SK53]
gi|383342670|gb|EID20880.1| ABC transporter, solute-binding protein [Streptococcus constellatus
subsp. constellatus SK53]
Length = 356
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ + +S + + L+E + D K L + KR +
Sbjct: 74 YTKIKQGGTTY---DIAIPSEYMISKMMSEHLLEKL----DHSQIKGLENIGKRFLNQSF 126
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y + AP + W DLWRPE I M++ REV+G
Sbjct: 127 DPRNQYSIPYFWGTLGIVYNTELVKT---AP-KHWSDLWRPEYKNSIMMIDGAREVMGVG 182
Query: 132 LKYMGASYNSNN 143
L +G S NS N
Sbjct: 183 LNALGYSLNSKN 194
>gi|423068378|ref|ZP_17057166.1| hypothetical protein HMPREF9682_00387 [Streptococcus intermedius
F0395]
gi|355366869|gb|EHG14583.1| hypothetical protein HMPREF9682_00387 [Streptococcus intermedius
F0395]
Length = 356
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ + +S + + L+E + D K L + KR +
Sbjct: 74 YTKIKQGGTTY---DIAIPSEYMISKMMSEHLLEKL----DHSQIKGLENIGKRFLNQSF 126
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y + AP + W DLWRPE I M++ REV+G
Sbjct: 127 DPKNQYSIPYFWGTLGIVYNTELVKT---AP-KHWSDLWRPEYKNSIMMIDGAREVMGVG 182
Query: 132 LKYMGASYNSNN 143
L +G S NS N
Sbjct: 183 LNALGYSLNSKN 194
>gi|410679422|ref|YP_006931824.1| spermidine/putrescine ABC transporter, binding periplasmic protein
[Borrelia afzelii HLJ01]
gi|408536810|gb|AFU74941.1| spermidine/putrescine ABC transporter, binding periplasmic protein
[Borrelia afzelii HLJ01]
Length = 348
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNLYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNKKYNKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N +N D G++ QN L+
Sbjct: 174 KLGYSINEDNTDKIKEAGELLKIQNPLLI 202
>gi|325263841|ref|ZP_08130574.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium sp.
D5]
gi|324030879|gb|EGB92161.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium sp.
D5]
Length = 627
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY +G + I Y K+ + PI+ W LW + I M +S R+ G LKY+G
Sbjct: 404 YSVPYLFGTVGILYNKTMVDE----PIDSWSVLWDEKYKDSILMQDSVRDAFGVTLKYLG 459
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D A K+ ++Q
Sbjct: 460 YSLNSTDLDELEAAKKLLIEQ 480
>gi|427736973|ref|YP_007056517.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
gi|427372014|gb|AFY55970.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
Length = 361
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKY 134
++ P WG Y K P +DW LW+ + L+ RI+++N REVIG VLK
Sbjct: 138 YSVPMSWGTTGFIYNSEKLE----TPPQDWDYLWQNQKKLSKRITLLNDAREVIGGVLKM 193
Query: 135 MGASYNSNN 143
+G SYNS +
Sbjct: 194 LGYSYNSQS 202
>gi|392331550|ref|ZP_10276165.1| spermidine/putrescine extracellular binding protein [Streptococcus
canis FSL Z3-227]
gi|391419229|gb|EIQ82041.1| spermidine/putrescine extracellular binding protein [Streptococcus
canis FSL Z3-227]
Length = 357
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K AP+ W+DLWRPE I +++ RE++G L G
Sbjct: 133 YSLPYFWGTVGIVYNDQLVDK---APLH-WEDLWRPEYKNSIMLIDGAREMLGVGLTTFG 188
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS N+ Q+ + +QQ
Sbjct: 189 YSVNSKNL-GQLQAAERKLQQ 208
>gi|422884309|ref|ZP_16930758.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK49]
gi|332360324|gb|EGJ38136.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK49]
Length = 356
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMMIDGAREVMGIGLN 184
Query: 134 YMGASYNSNNIDSQV 148
G S NS + D+Q+
Sbjct: 185 SDGHSLNSKD-DNQL 198
>gi|300855351|ref|YP_003780335.1| spermidine/putrescine ABC transporter periplasmic protein
[Clostridium ljungdahlii DSM 13528]
gi|300435466|gb|ADK15233.1| putative spermidine/putrescine ABC transporter, periplasmic
component [Clostridium ljungdahlii DSM 13528]
Length = 358
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY G+ +I Y K + PI+ +KDLW L + +V+ PR VIG L
Sbjct: 133 KGNKYSIPYTLGSQIIVYNSEKVK----IPIKGYKDLWNSTLKNSLVLVDDPRIVIGMTL 188
Query: 133 KYMGASYNSNNIDSQ 147
K +G Y+ N DS+
Sbjct: 189 KKLG--YSMNETDSK 201
>gi|323694111|ref|ZP_08108290.1| spermidine/putrescine ABC transporter [Clostridium symbiosum
WAL-14673]
gi|323501828|gb|EGB17711.1| spermidine/putrescine ABC transporter [Clostridium symbiosum
WAL-14673]
Length = 645
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 76 IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 135
+++ PY WG + I Y + L + W DLW P G I M +S R+ LK
Sbjct: 412 LYSVPYTWGTVGILYNTKTIEERGLPVPKKWSDLWNPAYKGEILMQDSVRDAFMVALKAR 471
Query: 136 GASYNSNNIDS-QVAGGKVAVQQNL 159
G S N+ NI+ Q A + Q+ L
Sbjct: 472 GYSMNTENINELQEAKADLIAQKPL 496
>gi|323485348|ref|ZP_08090697.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium
symbiosum WAL-14163]
gi|355625500|ref|ZP_09048281.1| hypothetical protein HMPREF1020_02360 [Clostridium sp. 7_3_54FAA]
gi|323401384|gb|EGA93733.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium
symbiosum WAL-14163]
gi|354821324|gb|EHF05714.1| hypothetical protein HMPREF1020_02360 [Clostridium sp. 7_3_54FAA]
Length = 645
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 76 IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 135
+++ PY WG + I Y + L + W DLW P G I M +S R+ LK
Sbjct: 412 LYSVPYTWGTVGILYNTKTIEERGLPVPKKWSDLWNPAYKGEILMQDSVRDAFMVALKAR 471
Query: 136 GASYNSNNIDS-QVAGGKVAVQQNL 159
G S N+ NI+ Q A + Q+ L
Sbjct: 472 GYSMNTENINELQEAKADLIAQKPL 496
>gi|111115472|ref|YP_710090.1| spermidine/putrescine ABC transporter, binding periplasmic protein
[Borrelia afzelii PKo]
gi|216263536|ref|ZP_03435531.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia afzelii ACA-1]
gi|384207127|ref|YP_005592849.1| bacterial extracellular solute-binding family protein [Borrelia
afzelii PKo]
gi|110890746|gb|ABH01914.1| spermidine/putrescine ABC transporter, binding periplasmic protein
[Borrelia afzelii PKo]
gi|215980380|gb|EEC21201.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia afzelii ACA-1]
gi|342857011|gb|AEL69859.1| bacterial extracellular solute-binding family protein [Borrelia
afzelii PKo]
Length = 348
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNLYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNKKYNKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N +N D G++ QN L+
Sbjct: 174 KLGYSINEDNTDKIKEAGELLKIQNPLLI 202
>gi|392428865|ref|YP_006469876.1| spermidine/putrescine ABC transporter [Streptococcus intermedius
JTH08]
gi|419776303|ref|ZP_14302225.1| oligopeptide ABC transporter, oligopeptide-binding protein
[Streptococcus intermedius SK54]
gi|424787909|ref|ZP_18214672.1| bacterial extracellular solute-binding family protein
[Streptococcus intermedius BA1]
gi|383845714|gb|EID83114.1| oligopeptide ABC transporter, oligopeptide-binding protein
[Streptococcus intermedius SK54]
gi|391758011|dbj|BAM23628.1| spermidine/putrescine ABC transporter [Streptococcus intermedius
JTH08]
gi|422113259|gb|EKU17005.1| bacterial extracellular solute-binding family protein
[Streptococcus intermedius BA1]
Length = 356
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ + +S + +RL+E + D K L + KR +
Sbjct: 74 YTKIKQGGTTY---DIAIPSEYMISKMMSERLLEKL----DHSQIKGLENIGKRFLNQSF 126
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y + P + W DLWRPE I M++ REV+G
Sbjct: 127 DPKNQYSIPYFWGTLGIVYNTELVKT---VP-KHWSDLWRPEYKNSIMMIDGAREVMGIG 182
Query: 132 LKYMGASYNSNN 143
L +G S NS N
Sbjct: 183 LNALGYSLNSKN 194
>gi|423070222|ref|ZP_17058998.1| hypothetical protein HMPREF9177_00315 [Streptococcus intermedius
F0413]
gi|355366543|gb|EHG14261.1| hypothetical protein HMPREF9177_00315 [Streptococcus intermedius
F0413]
Length = 356
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ + +S + +RL+E + D K L + KR +
Sbjct: 74 YTKIKQGGTTY---DIAIPSEYMISKMMSERLLEKL----DHSQIKGLENIGKRFLNQSF 126
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y + P + W DLWRPE I M++ REV+G
Sbjct: 127 DPKNQYSIPYFWGTLGIVYNTELVKT---VP-KHWSDLWRPEYKNSIMMIDGAREVMGIG 182
Query: 132 LKYMGASYNSNN 143
L +G S NS N
Sbjct: 183 LNALGYSLNSKN 194
>gi|419781473|ref|ZP_14307294.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK100]
gi|383184191|gb|EIC76716.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK100]
Length = 356
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++K D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETKV---DEAP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|257868707|ref|ZP_05648360.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
gi|257802871|gb|EEV31693.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
Length = 356
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 14/127 (11%)
Query: 20 KVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPI-----AGGEDQDWFKCLSHKWKRTRG 74
KVK Y DL+ + + IE++L+ P+ G ED F + ++ +
Sbjct: 76 KVKQGGTRY---DLIFPSESMIPKMIEEQLLIPLEHDKLVGSEDLSDF-LMDQRFDKNNH 131
Query: 75 KIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKY 134
++ PY WG + I + D I W DLWRPE A I +V+ RE +G L+
Sbjct: 132 --YSIPYFWGTIGIMVNSDQI---DPTTIHGWADLWRPEFANDILVVDGARETLGMALQT 186
Query: 135 MGASYNS 141
+ S N
Sbjct: 187 LDLSQNE 193
>gi|315652409|ref|ZP_07905397.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lachnoanaerobaculum
saburreum DSM 3986]
gi|315485308|gb|EFU75702.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lachnoanaerobaculum
saburreum DSM 3986]
Length = 369
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
+ PY G +I Y + I ++DLW+PELAG + +V + R + G LK +G
Sbjct: 144 YTMPYGAGIPLIVYNPETVKTE----ITGYEDLWKPELAGNVGIVGNYRVIDGIALKTLG 199
Query: 137 ASYNSNNIDS-QVAGGKV 153
S+N+N++ Q AG K+
Sbjct: 200 YSFNTNDLTQIQQAGDKL 217
>gi|357049604|ref|ZP_09110823.1| hypothetical protein HMPREF9478_00806 [Enterococcus saccharolyticus
30_1]
gi|355383069|gb|EHG30156.1| hypothetical protein HMPREF9478_00806 [Enterococcus saccharolyticus
30_1]
Length = 359
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 14/127 (11%)
Query: 20 KVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPI-----AGGEDQDWFKCLSHKWKRTRG 74
KVK Y DL+ + + IE++L+ P+ G ED F + ++ +
Sbjct: 79 KVKQGGTRY---DLIFPSESMIPKMIEEQLLIPLEHDKLVGSEDLSDF-LMDQRFDKNNH 134
Query: 75 KIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKY 134
++ PY WG + I + D I W DLWRPE A I +V+ RE +G L+
Sbjct: 135 --YSIPYFWGTIGIMVNSDQI---DPTTIHGWADLWRPEFANDILVVDGARETLGMALQT 189
Query: 135 MGASYNS 141
+ S N
Sbjct: 190 LDLSQNE 196
>gi|422854149|ref|ZP_16900813.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK160]
gi|325696663|gb|EGD38552.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK160]
Length = 356
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMMIDGAREVMGIGLN 184
Query: 134 YMGASYNSNNID 145
G S NS + +
Sbjct: 185 SDGHSLNSKDTN 196
>gi|323351688|ref|ZP_08087342.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
VMC66]
gi|322122174|gb|EFX93900.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
VMC66]
Length = 356
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMMIDGAREVMGIGLN 184
Query: 134 YMGASYNSNNID 145
G S NS + +
Sbjct: 185 SDGHSLNSKDTN 196
>gi|419718544|ref|ZP_14245861.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lachnoanaerobaculum saburreum F0468]
gi|383305379|gb|EIC96747.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lachnoanaerobaculum saburreum F0468]
Length = 369
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
+ PY G +I Y + I ++DLW+PELAG + +V + R + G LK +G
Sbjct: 144 YTMPYGAGIPLIVYNPETVKTE----ITGYEDLWKPELAGNVGIVGNYRVIDGIALKTLG 199
Query: 137 ASYNSNNIDS-QVAGGKV 153
S+N+N++ Q AG K+
Sbjct: 200 YSFNTNDLTQIQQAGDKL 217
>gi|157150979|ref|YP_001450107.1| spermidine/putrescine ABC transporter [Streptococcus gordonii str.
Challis substr. CH1]
gi|157075773|gb|ABV10456.1| spermidine/putrescine ABC transporter [Streptococcus gordonii str.
Challis substr. CH1]
Length = 356
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + D AP E W DLWRPE I +++ REV+G L
Sbjct: 129 GNQYSVPYFWGTLGIVYNS---KLVDKAP-EHWDDLWRPEYKNSIMLIDGAREVMGLGLN 184
Query: 134 YMGASYNSNNID 145
+G N N D
Sbjct: 185 SLGYGLNDKNAD 196
>gi|385330681|ref|YP_005884632.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Marinobacter adhaerens HP15]
gi|311693831|gb|ADP96704.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinobacter adhaerens HP15]
Length = 368
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 70 KRTRGKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-------ISM 120
K G +A PY WG Y + + ++ D AP + W ++ PE+ G+ I+M
Sbjct: 119 KVDPGSQFALPYLWGTNGYGYNEGRIQEILGDSAPTDSWALVFDPEVTGKLATGGCGIAM 178
Query: 121 VNSPREVIGSVLKYMGASYNSNNIDSQVAGGKV--AVQQNLALLQN 164
++S E++ + + Y+G NSNN D GG+V A++ N+ +
Sbjct: 179 LDSGEEMVRAAMAYIGLDPNSNNADDIKKGGEVIKAIRPNITYFHS 224
>gi|315221361|ref|ZP_07863282.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Streptococcus anginosus F0211]
gi|315189480|gb|EFU23174.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Streptococcus anginosus F0211]
Length = 356
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ + +S + + L+E + D K L + KR +
Sbjct: 74 YTKIKQGGTTY---DIAIPSEYMISKMMSEHLLEKL----DHSKIKGLENIGKRFLNQSF 126
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y + AP + W DLWRPE I M++ REV+G
Sbjct: 127 DPQNQYSIPYFWGTLGIVYNTELVKT---AP-KHWSDLWRPEYKNSIMMIDGAREVMGVG 182
Query: 132 LKYMGASYNSNN 143
L +G S NS N
Sbjct: 183 LNALGYSLNSKN 194
>gi|387813512|ref|YP_005428994.1| putrescine ABC transporter periplasmic-binding protein
[Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381338524|emb|CCG94571.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 368
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 65 LSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR----- 117
++ K G ++ PY WG Y + + ++ D AP + W ++ PE+ G+
Sbjct: 114 MTQLEKVDPGSQFSLPYLWGTNGYGYNEGRIQEILGDTAPTDSWALVFDPEVTGKLAAGG 173
Query: 118 --ISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKV--AVQQNLALLQN 164
I+M++S E++ + + Y+G NSNN D GG+V AV+ N+ +
Sbjct: 174 CGIAMLDSGEEMVRAAMAYIGLDPNSNNADDIKKGGEVIKAVRPNITYFHS 224
>gi|331085857|ref|ZP_08334940.1| hypothetical protein HMPREF0987_01243 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406780|gb|EGG86285.1| hypothetical protein HMPREF0987_01243 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 625
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K ++ PI+ W LW I M +S R+ LKY+G
Sbjct: 402 YSVPYCWGTVGILYNKKMVKE----PIDSWSVLWDETYKDNILMQDSVRDAFAVALKYLG 457
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D A + ++Q
Sbjct: 458 YSLNSTDLDELEAAKALLIEQ 478
>gi|253575509|ref|ZP_04852846.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251845156|gb|EES73167.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 335
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKW 69
+F N K+KA Y DL+ D ++ I++ L+ P+ + F +S +
Sbjct: 46 VFANNEDLLAKIKAGGGGY---DLIQPSDYMVATMIKQDLLAPLDMNNIPN-FANVSDAY 101
Query: 70 KRTR---GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPRE 126
K G ++ Y G IAY K K+ K + I+ W+DLW PE G++ +++ RE
Sbjct: 102 KNPSYDPGNKYSIVYTSGVTGIAYNK-KYVKDE---IDSWEDLWNPEYKGKVILLDDNRE 157
Query: 127 VIGSVLKYMGASYNSNN 143
VIG LK G S +S +
Sbjct: 158 VIGMALKKNGYSNSSTD 174
>gi|398966779|ref|ZP_10681651.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398145451|gb|EJM34234.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 366
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 25/161 (15%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPI--------AGGEDQDWF 62
F++L K+ + Y DLV LS AIE I+P+ AG D+ F
Sbjct: 60 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIESGAIQPLDKARVPHFAGVGDE--F 114
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR---- 117
+ H G +A Y WG + Y++ ++ AP + W L+ P + +
Sbjct: 115 R--QHMAVFDPGNRYAGIYAWGTTGVGYQEQAIKQRLPNAPTDSWAMLFDPAVVAKFADC 172
Query: 118 -ISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
+S++N P EV +V+KY+G N ++D K+A QQ
Sbjct: 173 GVSLLNDPNEVFAAVMKYLGLDINRQSLDDL----KLAEQQ 209
>gi|320450353|ref|YP_004202449.1| spermidine/putrescine-binding periplasmic protein [Thermus
scotoductus SA-01]
gi|320150522|gb|ADW21900.1| spermidine/putrescine-binding periplasmic protein [Thermus
scotoductus SA-01]
Length = 341
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 10/128 (7%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTR---GKIWAAPYRWGAMMI 88
D++ D ++ I+ L++P+ + + K L K+K G ++A Y+WG +
Sbjct: 71 DIIVPSDFYVPSIIQLGLVQPLNHAKIPN-LKNLDDKFKNPPFDPGNRYSAAYQWGTTGL 129
Query: 89 AYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQV 148
++K K K D W L++ A I M +SPRE++G+ L+Y+G S N+ N
Sbjct: 130 IFRKDKVAKPD-----SWAVLFKDPKAPFILM-DSPREMLGNALRYLGYSVNTKNPKEVQ 183
Query: 149 AGGKVAVQ 156
A G++ +Q
Sbjct: 184 AAGQLLLQ 191
>gi|399543357|ref|YP_006556665.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
BSs20148]
gi|399158689|gb|AFP29252.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
BSs20148]
Length = 348
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAP--IEDWKDLWRP--ELAGRISMVNSPREVI 128
+ + + PY WG + I Y++ DL P + W DL +P EL G+ISM+ ++I
Sbjct: 119 KAEDFGVPYFWGTIGIVYRR------DLVPFAVSSWMDLLQPIEELHGKISMIGDSADMI 172
Query: 129 GSVLKYMGASYNSNNIDS 146
G+ LK +G S NS N D
Sbjct: 173 GAALKALGYSLNSTNEDE 190
>gi|358451127|ref|ZP_09161561.1| extracellular solute-binding protein [Marinobacter manganoxydans
MnI7-9]
gi|357224360|gb|EHJ02891.1| extracellular solute-binding protein [Marinobacter manganoxydans
MnI7-9]
Length = 368
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 70 KRTRGKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-------ISM 120
K G +A PY WG Y + + ++ D AP + W ++ PE+ G+ I+M
Sbjct: 119 KVDPGSQFALPYLWGTNGYGYNEGRIQEILGDSAPTDSWALVFDPEVTGKLAAGGCGIAM 178
Query: 121 VNSPREVIGSVLKYMGASYNSNNIDSQVAGGKV--AVQQNLALLQN 164
++S E++ + + Y+G NSNN D GG+V A++ N+ +
Sbjct: 179 LDSGEEMVRAAMAYIGLDPNSNNADDIRKGGEVIKAIRPNITYFHS 224
>gi|386316892|ref|YP_006013056.1| Spermidine/putrescine-binding protein [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
gi|323127179|gb|ADX24476.1| Spermidine/putrescine-binding protein [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
Length = 357
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 17/134 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ D + I+K + E + D+ + + K GK
Sbjct: 75 YTKIKQGGTTY---DIAVPSD----YTIDKMIKENLLNKLDKSKLVGMDNIGKEFLGKSF 127
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 128 DPQNDYSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREMLGVG 183
Query: 132 LKYMGASYNSNNID 145
L G S NS N++
Sbjct: 184 LTTFGYSVNSKNLE 197
>gi|312863574|ref|ZP_07723812.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus vestibularis F0396]
gi|311101110|gb|EFQ59315.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus vestibularis F0396]
Length = 355
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K AP + W DLW PE +I +V+ REVIG L +G
Sbjct: 131 YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMLVDGAREVIGLSLNSLG 186
Query: 137 ASYNSNNI 144
S N+ N+
Sbjct: 187 YSLNTKNM 194
>gi|262282608|ref|ZP_06060376.1| spermidine/putrescine ABC transporter [Streptococcus sp. 2_1_36FAA]
gi|262261899|gb|EEY80597.1| spermidine/putrescine ABC transporter [Streptococcus sp. 2_1_36FAA]
Length = 356
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + D AP E W DLWRPE I +++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNS---KMVDKAP-EHWDDLWRPEYKNSIMLIDGAREVMGLGLN 184
Query: 134 YMGASYNSNNID 145
+G N N D
Sbjct: 185 SLGYGLNDKNAD 196
>gi|422878972|ref|ZP_16925438.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1059]
gi|422928818|ref|ZP_16961760.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
ATCC 29667]
gi|422931792|ref|ZP_16964723.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK340]
gi|332366594|gb|EGJ44338.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1059]
gi|339615976|gb|EGQ20638.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
ATCC 29667]
gi|339619225|gb|EGQ23806.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK340]
Length = 356
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMMIDGAREVMGLGLN 184
Query: 134 YMGASYNSNN 143
G S NS +
Sbjct: 185 SDGHSLNSKD 194
>gi|422862723|ref|ZP_16909355.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK408]
gi|327473931|gb|EGF19344.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK408]
Length = 356
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMMIDGAREVMGLGLN 184
Query: 134 YMGASYNSNN 143
G S NS +
Sbjct: 185 SDGHSLNSKD 194
>gi|422858591|ref|ZP_16905241.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1057]
gi|327459734|gb|EGF06074.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1057]
Length = 356
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMMIDGAREVMGIGLN 184
Query: 134 YMGASYNSNN 143
G S NS +
Sbjct: 185 SDGHSLNSKD 194
>gi|401683002|ref|ZP_10814891.1| ABC transporter, solute-binding protein [Streptococcus sp. AS14]
gi|400183684|gb|EJO17935.1| ABC transporter, solute-binding protein [Streptococcus sp. AS14]
Length = 356
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I M++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMMIDGAREVMGLGLN 184
Query: 134 YMGASYNSNN 143
G S NS +
Sbjct: 185 SDGHSLNSKD 194
>gi|255655004|ref|ZP_05400413.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-23m63]
gi|296449753|ref|ZP_06891523.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Clostridium difficile
NAP08]
gi|296877930|ref|ZP_06901949.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Clostridium difficile
NAP07]
gi|296261477|gb|EFH08302.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Clostridium difficile
NAP08]
gi|296430998|gb|EFH16826.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Clostridium difficile
NAP07]
Length = 350
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG + I Y K + + PI+ W LW P+ G I M +S R+ IG LK +G
Sbjct: 129 YSVAYMWGTLGILYNKKEVKD----PIDSWNILWNPKYKGNIMMFDSVRDTIGITLKKLG 184
Query: 137 ASYNSNN 143
S NS N
Sbjct: 185 YSMNSVN 191
>gi|399009153|ref|ZP_10711595.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
gi|398113430|gb|EJM03277.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
Length = 364
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGRIS-----MVNSPRE 126
G +AAPY WG I Y K + D AP++ W +++ E R+S M+++P E
Sbjct: 121 GNRFAAPYLWGTTGIGYDVGKVKALLGDQAPVDSWDLIFKEENLARLSQCGVAMLDAPNE 180
Query: 127 VIGSVLKYMGASYNSNN 143
+I L Y+G YNS N
Sbjct: 181 IIPIALHYLGLPYNSQN 197
>gi|406664769|ref|ZP_11072544.1| Spermidine/putrescine-binding periplasmic protein precursor
[Bacillus isronensis B3W22]
gi|405387617|gb|EKB47041.1| Spermidine/putrescine-binding periplasmic protein precursor
[Bacillus isronensis B3W22]
Length = 358
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + + Y + H E W+DLW P L ++ +V+ REVIG L
Sbjct: 129 GNEYSIPYFWGTVGVVYNPNLIEDH--LTFETWEDLWDPSLKRKVFLVDGSREVIGMGLN 186
Query: 134 YMGASYNSNNID 145
+G S N + D
Sbjct: 187 SIGESLNVKDED 198
>gi|393201891|ref|YP_006463733.1| spermidine/putrescine-binding periplasmic protein [Solibacillus
silvestris StLB046]
gi|327441222|dbj|BAK17587.1| spermidine/putrescine-binding periplasmic protein [Solibacillus
silvestris StLB046]
Length = 358
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + + Y + H E W+DLW P L ++ +V+ REVIG L
Sbjct: 129 GNEYSIPYFWGTVGVVYNPNLIEDH--LTFETWEDLWDPSLKRKVFLVDGSREVIGMGLN 186
Query: 134 YMGASYNSNNID 145
+G S N + D
Sbjct: 187 SIGESLNVKDED 198
>gi|262274396|ref|ZP_06052207.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Grimontia hollisae CIP 101886]
gi|262220959|gb|EEY72273.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Grimontia hollisae CIP 101886]
Length = 347
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG I+Y + D + + W DLW+PE AG I +++ R+V G LK G
Sbjct: 126 YSLPYVWGVTAISYNGNIV---DGSKVTKWADLWKPEFAGHIILLDDVRDVFGMALKAKG 182
Query: 137 ASYNSNN 143
S N+ N
Sbjct: 183 YSINTTN 189
>gi|222152979|ref|YP_002562156.1| spermidine/putrescine extracellular binding protein [Streptococcus
uberis 0140J]
gi|222113792|emb|CAR41844.1| spermidine/putrescine extracellular binding protein [Streptococcus
uberis 0140J]
Length = 357
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI- 76
+ K+K +Y D+ D + I+K + E + D+ K + + GK
Sbjct: 75 YTKIKQGGTTY---DIAVPSD----YTIDKMIKEDLLVKLDKSKLKGMENIGTEFLGKSF 127
Query: 77 -----WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y K AP + WKDLWRPE I +++ REV+G
Sbjct: 128 DPKNDYSIPYFWGTVGIVYNDQMVDK---AP-KHWKDLWRPEYQNDIMLIDGAREVMGLG 183
Query: 132 LKYMGASYNSNNI 144
L G S N+ N+
Sbjct: 184 LNTFGYSLNAKNM 196
>gi|443470634|ref|ZP_21060717.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
gi|442900404|gb|ELS26546.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
Length = 367
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGRIS-----MVNSPRE 126
G +A PY WG I Y K R + AP++ W L++ E R+S +++SP E
Sbjct: 124 GNRYAVPYMWGTNGIGYNVDKVRAALGEQAPVDSWDLLFKEENLARLSQCGVALLDSPSE 183
Query: 127 VIGSVLKYMGASYNSNNID 145
++ VL+Y+G NSNN D
Sbjct: 184 ILPIVLQYLGLPPNSNNPD 202
>gi|322376240|ref|ZP_08050733.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
M334]
gi|321282047|gb|EFX59054.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
M334]
Length = 356
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 128 KGNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGL 183
Query: 133 KYMGASYNSNN 143
+G S NS +
Sbjct: 184 NSLGYSLNSKD 194
>gi|421490077|ref|ZP_15937452.1| ABC transporter, solute-binding protein [Streptococcus anginosus
SK1138]
gi|400374090|gb|EJP27014.1| ABC transporter, solute-binding protein [Streptococcus anginosus
SK1138]
Length = 356
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + AP + W DLWRPE I M++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNTELVKT---AP-KHWSDLWRPEYKNSIMMIDGAREVMGVGLNALG 187
Query: 137 ASYNSNN 143
S NS N
Sbjct: 188 YSLNSKN 194
>gi|398890352|ref|ZP_10643989.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398188316|gb|EJM75624.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 365
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++L K+ + Y DLV LS AIE ++ + + F + +++
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIESGAVQTV-DKQQLPHFAGVGEEFR 114
Query: 71 RTR-----GKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----IS 119
+ G +A Y WG + Y++ ++ AP + W L+ P + + +S
Sbjct: 115 QHMAVFDPGNRYAGIYAWGTTGVGYQEEAVKQRLPGAPTDSWAMLFDPAVVAKFADCGVS 174
Query: 120 MVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
++N P EV +V+KYMG N N+D K+A QQ
Sbjct: 175 LLNDPNEVFAAVMKYMGLDINRQNLDDL----KLAEQQ 208
>gi|350270463|ref|YP_004881771.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Oscillibacter valericigenes Sjm18-20]
gi|348595305|dbj|BAK99265.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Oscillibacter valericigenes Sjm18-20]
Length = 357
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + + I W L+ P+ AG++ M+N+ R+ IG LK +G
Sbjct: 134 YSVPYMWGTVGIIYNTTMVDEA----ITSWDALFDPKYAGQVLMINNSRDAIGVALKDLG 189
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
SYN+ + + +QQ
Sbjct: 190 YSYNTTDQAQITEAVNLLIQQ 210
>gi|345006259|ref|YP_004809112.1| extracellular solute-binding protein [halophilic archaeon DL31]
gi|344321885|gb|AEN06739.1| extracellular solute-binding protein [halophilic archaeon DL31]
Length = 397
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 16/136 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIE-------PIAGGEDQDWFKCLSHKWK 70
FNK+ A S DL+ D ++ ++ +++ P + W +
Sbjct: 104 FNKLNAGGTSQF--DLIFPSDYMVNVLADQEMVQGLNLERIPHWDNLEDYWINTAPYDPG 161
Query: 71 RTRGKIWAAPYRWGAMMIAYKKSKFR---KHDLAPIEDWKDLWRPELAGRISMVNSPREV 127
TR ++APY WG IA+ ++ F K +L P+ W +W G ++M+N RE
Sbjct: 162 ETR---YSAPYFWGTSGIAWNENMFSDEVKSEL-PLTSWDAMWDDRFGGDMTMLNDSREA 217
Query: 128 IGSVLKYMGASYNSNN 143
IG+ LK +G S N+ +
Sbjct: 218 IGAALKRLGYSLNTTD 233
>gi|418977696|ref|ZP_13525510.1| ABC transporter, solute-binding protein [Streptococcus mitis SK575]
gi|383349664|gb|EID27593.1| ABC transporter, solute-binding protein [Streptococcus mitis SK575]
Length = 356
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS N
Sbjct: 185 SLGYSLNSKN 194
>gi|237806781|ref|YP_002891221.1| extracellular solute-binding protein [Tolumonas auensis DSM 9187]
gi|237499042|gb|ACQ91635.1| extracellular solute-binding protein family 1 [Tolumonas auensis
DSM 9187]
Length = 337
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 14/90 (15%)
Query: 78 AAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKYM 135
+ PY WG++ IAY++S+ + PI W+ L+ PE L+GRI MV+ +++ LK
Sbjct: 114 SVPYMWGSVGIAYRRSQVSE----PITRWQQLFTPEPTLSGRIVMVDDTFDLVSVALKAA 169
Query: 136 GASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
G S N++N K +Q LLQ Q
Sbjct: 170 GFSINTHN--------KSELQAAYHLLQKQ 191
>gi|149002771|ref|ZP_01827697.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP14-BS69]
gi|147759065|gb|EDK66059.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP14-BS69]
Length = 270
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 112 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 167
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 168 SLGYSLNSKDL 178
>gi|15894124|ref|NP_347473.1| spermidine/putrescine-binding periplasmic protein [Clostridium
acetobutylicum ATCC 824]
gi|337736053|ref|YP_004635500.1| spermidine/putrescine-binding periplasmic protein [Clostridium
acetobutylicum DSM 1731]
gi|384457562|ref|YP_005669982.1| Spermidine/putrescine-binding periplasmic protein [Clostridium
acetobutylicum EA 2018]
gi|15023729|gb|AAK78813.1|AE007599_9 Spermidine/putrescine-binding periplasmic protein [Clostridium
acetobutylicum ATCC 824]
gi|325508251|gb|ADZ19887.1| Spermidine/putrescine-binding periplasmic protein [Clostridium
acetobutylicum EA 2018]
gi|336292044|gb|AEI33178.1| spermidine/putrescine-binding periplasmic protein [Clostridium
acetobutylicum DSM 1731]
Length = 354
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW------FKCLSHKWKR 71
+ KVK+ + +Y DL+ D + I++ ++ I ++ +K LS+ K
Sbjct: 72 YEKVKSGTNNY---DLICPSDYMVDRMIKENSVQKIDFKSLSNYSNIDNKYKNLSYDPKN 128
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
+ ++ PY WG + I Y K++ + ++ W DLW P+ ++ M + R +G
Sbjct: 129 S----YSVPYMWGTIGIIYDKTQIKDK----LDSWNDLWNPKYKDKVYMSDDMRNSLGIS 180
Query: 132 LKYMGASYNSNNIDSQVAGGKVAVQQ 157
LK +G S NS N + ++Q
Sbjct: 181 LKRLGYSMNSKNKNEISKASSALIEQ 206
>gi|381205079|ref|ZP_09912150.1| extracellular solute-binding protein [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 360
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 75 KIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW-RPELAGRISMVNSPREVIGSVLK 133
+ ++ PY WG + I Y+KSK K P + W L+ E +GRI+++NSP E I +K
Sbjct: 135 RAYSMPYMWGTVGIGYRKSKVSK---VP-DSWASLFASSEYSGRIALLNSPSETIPIAMK 190
Query: 134 YMGASYNSNNIDSQV 148
Y+G S N+ DS+V
Sbjct: 191 YLGHSINT--ADSEV 203
>gi|374604938|ref|ZP_09677885.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
dendritiformis C454]
gi|374389461|gb|EHQ60836.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
dendritiformis C454]
Length = 344
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 9 GIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHK 68
+F N K+KA A+Y DL+ D ++ I++ L+E I ++D +
Sbjct: 55 AVFANNEELLAKIKAGGANY---DLIQPSDYMVASMIKQDLLETI----NKDNIPNFQYV 107
Query: 69 WKRTRGKIW------AAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVN 122
R + + + Y WG IAY K KH W DLW+ E G++ +++
Sbjct: 108 VDRFKNPAYDPNSEHSIIYMWGVTGIAYNK----KHIAEAPTSWADLWKDEYKGKVLLLD 163
Query: 123 SPREVIGSVLKYMGASYNSNN 143
RE+IG LK G S +++N
Sbjct: 164 DNREIIGMALKKAGKSNSADN 184
>gi|426409809|ref|YP_007029908.1| spermidine/putrescine transport system substrate-binding protein
[Pseudomonas sp. UW4]
gi|426268026|gb|AFY20103.1| spermidine/putrescine transport system substrate-binding protein
[Pseudomonas sp. UW4]
Length = 365
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++L K+ + Y DLV LS AIE ++ + + F + +++
Sbjct: 59 FDSLETVETKLLTGHSGY---DLVLTAGQHLSRAIESGAVQTV-DKQQLPHFAGVGEEFR 114
Query: 71 RTR-----GKIWAAPYRWGAMMIAYKKSKFRKHDL-APIEDWKDLWRPELAGR-----IS 119
+ G +A Y WG + Y++ ++ AP + W L+ P + + +S
Sbjct: 115 QHMAVFDPGNRYAGIYAWGTTGVGYQEQAVKQRLADAPTDSWAMLFDPAVVSKFADCGVS 174
Query: 120 MVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
++N P EV +V+KYMG N N+D K+A QQ
Sbjct: 175 LLNDPNEVFAAVMKYMGLDINRQNLDDL----KLAEQQ 208
>gi|398883864|ref|ZP_10638812.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398195906|gb|EJM82931.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
Length = 365
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 25/161 (15%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPI--------AGGEDQDWF 62
F++L K+ + Y DLV LS AI+ I+ + AG D+ F
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIQSGAIQTLNLQRLPHFAGVGDE--F 113
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR---- 117
+ H G +A Y WG + Y++ +K AP + W L+ P + +
Sbjct: 114 R--QHMAVFDPGNRYAGIYAWGTTGVGYQEEAVKKRLPEAPTDSWAMLFDPAVVSKFADC 171
Query: 118 -ISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
+S++N P EV +V+KYMG N N+D K+A QQ
Sbjct: 172 GVSLLNDPNEVFAAVMKYMGLDINRQNLDDL----KLAEQQ 208
>gi|317485961|ref|ZP_07944816.1| bacterial extracellular solute-binding protein [Bilophila
wadsworthia 3_1_6]
gi|316922734|gb|EFV43965.1| bacterial extracellular solute-binding protein [Bilophila
wadsworthia 3_1_6]
Length = 345
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G PY WG + + K + D++ I+ WKDL RPE GR+ + + R+ G L
Sbjct: 118 KGNALTIPYMWGTVGLLVNK---KAVDVSTIKSWKDLARPEFKGRVLLSDDLRDTFGVGL 174
Query: 133 KYMGASYNSNNIDS 146
K G S NS N D
Sbjct: 175 KACGYSINSTNPDE 188
>gi|374308426|ref|YP_005054857.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Filifactor alocis ATCC 35896]
gi|291166751|gb|EFE28797.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Filifactor alocis
ATCC 35896]
Length = 354
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 60 DWFKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRIS 119
D FK LS+ GK ++ PY WG++ I Y K+K + P++ W LW + G I
Sbjct: 120 DRFKNLSYD---PNGK-YSVPYLWGSLGILYNKTKVTE----PVDSWNILWNEKYKGDIV 171
Query: 120 MVNSPREVIGSVLKYMGASYNSNN 143
M++S R+ I L +G S N+ N
Sbjct: 172 MLDSSRDTIAVALLKLGYSINTQN 195
>gi|434404601|ref|YP_007147486.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
gi|428258856|gb|AFZ24806.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
Length = 361
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSVLKY 134
+ P+ WG + Y K + AP EDW LW + +L R++++N REVIG+ L+
Sbjct: 138 YCIPFNWGTTGLIYNSEKL---ETAP-EDWDYLWQNKEKLNKRMTLLNDVREVIGATLRM 193
Query: 135 MGASYNSNN 143
+G SYNS N
Sbjct: 194 LGYSYNSQN 202
>gi|365843457|ref|ZP_09384375.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Flavonifractor plautii ATCC
29863]
gi|364571382|gb|EHM48970.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Flavonifractor plautii ATCC
29863]
Length = 368
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTR---G 74
+ K+ + Y D++ D + IE+ ++EP+ ++ F + K
Sbjct: 86 YGKLAGGAGGY---DVIIPSDYMIGQLIEEDMLEPL-NFDNIPNFADIDPNLKNPEYDPE 141
Query: 75 KIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKY 134
+++ PY WG + + Y + + +E W LW EL+G I M N+ R+ IG LK
Sbjct: 142 NLYSVPYMWGLLGVIYNSAYIDPAE-KDVETWDILWDEELSGDILMFNNSRDAIGIALKK 200
Query: 135 MGASYNSNN 143
+G SYN+ +
Sbjct: 201 LGYSYNTED 209
>gi|373115165|ref|ZP_09529342.1| hypothetical protein HMPREF0995_00178 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670640|gb|EHO35718.1| hypothetical protein HMPREF0995_00178 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 368
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTR---G 74
+ K+ + Y D++ D + IE+ ++EP+ ++ F + K
Sbjct: 86 YGKLAGGAGGY---DVIIPSDYMIGQLIEEDMLEPL-NFDNIPNFADIDPNLKNPEYDPE 141
Query: 75 KIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKY 134
+++ PY WG + + Y + + +E W LW EL+G I M N+ R+ IG LK
Sbjct: 142 NLYSVPYMWGLLGVIYNSAYIDPAE-KDVETWDILWDEELSGDILMFNNSRDAIGIALKK 200
Query: 135 MGASYNSNN 143
+G SYN+ +
Sbjct: 201 LGYSYNTED 209
>gi|418146584|ref|ZP_12783362.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13637]
gi|353812159|gb|EHD92394.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13637]
Length = 356
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|332637313|ref|ZP_08416176.1| spermidine/putrescine-binding periplasmic protein [Weissella
cibaria KACC 11862]
Length = 361
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY WG + I Y + D I+ W DLW P+ I +++S R+++G L
Sbjct: 132 RGNQYSVPYFWGTLGIVYNDKYVKAGD---IKTWNDLWNPKYKNSIMLIDSSRDIMGMTL 188
Query: 133 KYMGASYNSNNI 144
G S N+ +I
Sbjct: 189 ASSGESVNTKSI 200
>gi|418189574|ref|ZP_12826089.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47373]
gi|419495604|ref|ZP_14035322.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47461]
gi|421303503|ref|ZP_15754167.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA17484]
gi|353856716|gb|EHE36685.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47373]
gi|379595686|gb|EHZ60494.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47461]
gi|395902125|gb|EJH13061.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA17484]
Length = 356
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|373468324|ref|ZP_09559581.1| ABC transporter, solute-binding protein [Lachnospiraceae bacterium
oral taxon 082 str. F0431]
gi|371766415|gb|EHO54670.1| ABC transporter, solute-binding protein [Lachnospiraceae bacterium
oral taxon 082 str. F0431]
Length = 371
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
+ PY G +I Y + I + DLW+PELAG + +V + R + G LK +G
Sbjct: 146 YTLPYGAGIPLIVYNPETVKTE----ITGYDDLWKPELAGNVGIVGNYRVIDGIALKTLG 201
Query: 137 ASYNSNNIDS-QVAGGKV 153
S+N+N++ Q AG K+
Sbjct: 202 YSFNTNDLTQIQQAGDKL 219
>gi|120555050|ref|YP_959401.1| extracellular solute-binding protein [Marinobacter aquaeolei VT8]
gi|120324899|gb|ABM19214.1| extracellular solute-binding protein, family 1 [Marinobacter
aquaeolei VT8]
Length = 368
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-------ISMVNSP 124
G ++ PY WG Y + + ++ D AP + W ++ PE+ G+ I+M++S
Sbjct: 123 GSQFSLPYLWGTNGYGYNEGRIQEILGDSAPTDSWALVFDPEVTGKLAAGGCGIAMLDSG 182
Query: 125 REVIGSVLKYMGASYNSNNIDSQVAGGKV--AVQQNLALLQN 164
E++ + + Y+G NSNN D GG+V AV+ N+ +
Sbjct: 183 EEMVRAAMAYIGLDPNSNNADDIKKGGEVIKAVRPNITYFHS 224
>gi|417698783|ref|ZP_12347955.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41317]
gi|418148768|ref|ZP_12785532.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13856]
gi|419453494|ref|ZP_13993466.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae EU-NP03]
gi|419506292|ref|ZP_14045953.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA49194]
gi|332200828|gb|EGJ14900.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41317]
gi|353811829|gb|EHD92066.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13856]
gi|379608206|gb|EHZ72952.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA49194]
gi|379626227|gb|EHZ90847.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae EU-NP03]
Length = 356
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|119953417|ref|YP_945626.1| spermidine/putrescine-binding protein [Borrelia turicatae 91E135]
gi|119862188|gb|AAX17956.1| spermidine/putrescine-binding protein [Borrelia turicatae 91E135]
Length = 349
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ P WG M I Y K+K D+ + ++ L+ + I+M++SP+E IG LK
Sbjct: 118 GNFYSVPLFWGVMGILYNKTKV---DINDMNEFDILFNEKYKQEIAMLDSPKENIGVALK 174
Query: 134 YMGASYNSNNI 144
+G S+N +NI
Sbjct: 175 KLGYSFNEHNI 185
>gi|419442736|ref|ZP_13982764.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13224]
gi|421227552|ref|ZP_15684256.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2072047]
gi|421234310|ref|ZP_15690929.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2061617]
gi|379552037|gb|EHZ17128.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13224]
gi|395595254|gb|EJG55488.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2072047]
gi|395600902|gb|EJG61056.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2061617]
Length = 356
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|168493289|ref|ZP_02717432.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC3059-06]
gi|225854833|ref|YP_002736345.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae JJA]
gi|225857021|ref|YP_002738532.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae P1031]
gi|418078826|ref|ZP_12716049.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 4027-06]
gi|418080800|ref|ZP_12718012.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 6735-05]
gi|418089738|ref|ZP_12726894.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA43265]
gi|418105432|ref|ZP_12742489.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44500]
gi|418114912|ref|ZP_12751899.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 5787-06]
gi|418117068|ref|ZP_12754038.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 6963-05]
gi|418135403|ref|ZP_12772258.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11426]
gi|418182956|ref|ZP_12819516.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA43380]
gi|418216791|ref|ZP_12843514.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae Netherlands15B-37]
gi|419431769|ref|ZP_13971905.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae EU-NP05]
gi|419434461|ref|ZP_13974578.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40183]
gi|419440566|ref|ZP_13980614.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40410]
gi|419464571|ref|ZP_14004463.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA04175]
gi|419469200|ref|ZP_14009070.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA06083]
gi|419497757|ref|ZP_14037465.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47522]
gi|421281320|ref|ZP_15732118.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA04672]
gi|421309792|ref|ZP_15760418.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA62681]
gi|444410057|ref|ZP_21206610.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0076]
gi|444412226|ref|ZP_21208548.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0153]
gi|444423460|ref|ZP_21219064.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0446]
gi|183576597|gb|EDT97125.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC3059-06]
gi|225722374|gb|ACO18227.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae JJA]
gi|225726064|gb|ACO21916.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae P1031]
gi|353748017|gb|EHD28673.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 4027-06]
gi|353753340|gb|EHD33964.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 6735-05]
gi|353761736|gb|EHD42302.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA43265]
gi|353776368|gb|EHD56844.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44500]
gi|353785977|gb|EHD66393.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 5787-06]
gi|353789429|gb|EHD69824.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 6963-05]
gi|353849097|gb|EHE29107.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA43380]
gi|353872383|gb|EHE52249.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae Netherlands15B-37]
gi|353901121|gb|EHE76667.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11426]
gi|379537605|gb|EHZ02787.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA04175]
gi|379545139|gb|EHZ10280.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA06083]
gi|379575845|gb|EHZ40775.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40183]
gi|379578706|gb|EHZ43615.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40410]
gi|379600021|gb|EHZ64803.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47522]
gi|379629437|gb|EHZ94033.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae EU-NP05]
gi|395882481|gb|EJG93528.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA04672]
gi|395910379|gb|EJH21252.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA62681]
gi|444274748|gb|ELU80390.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0153]
gi|444278278|gb|ELU83739.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0076]
gi|444286888|gb|ELU91841.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0446]
Length = 356
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|418096465|ref|ZP_12733577.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA16531]
gi|353769150|gb|EHD49671.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA16531]
Length = 339
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 112 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 167
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 168 SLGYSLNSKDL 178
>gi|387626642|ref|YP_006062817.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae INV104]
gi|444381932|ref|ZP_21180137.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PCS8106]
gi|444384622|ref|ZP_21182716.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PCS8203]
gi|301794427|emb|CBW36861.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae INV104]
gi|444252382|gb|ELU58846.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PCS8203]
gi|444253531|gb|ELU59986.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PCS8106]
Length = 356
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|15901240|ref|NP_345844.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus pneumoniae TIGR4]
gi|111658580|ref|ZP_01409237.1| hypothetical protein SpneT_02000255 [Streptococcus pneumoniae
TIGR4]
gi|148989507|ref|ZP_01820866.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP6-BS73]
gi|148997561|ref|ZP_01825166.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP11-BS70]
gi|149007344|ref|ZP_01831002.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP18-BS74]
gi|168484563|ref|ZP_02709515.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC1873-00]
gi|168491289|ref|ZP_02715432.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC0288-04]
gi|168575846|ref|ZP_02721761.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae MLV-016]
gi|194398708|ref|YP_002038032.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus pneumoniae G54]
gi|221232126|ref|YP_002511279.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae ATCC 700669]
gi|225859152|ref|YP_002740662.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus pneumoniae 70585]
gi|237651175|ref|ZP_04525427.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CCRI 1974]
gi|237821257|ref|ZP_04597102.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CCRI 1974M2]
gi|303254542|ref|ZP_07340646.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae BS455]
gi|303258982|ref|ZP_07344961.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP-BS293]
gi|303261666|ref|ZP_07347613.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP14-BS292]
gi|303264335|ref|ZP_07350255.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae BS397]
gi|303265866|ref|ZP_07351763.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae BS457]
gi|303268199|ref|ZP_07353998.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae BS458]
gi|307068039|ref|YP_003877005.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
pneumoniae AP200]
gi|307127045|ref|YP_003879076.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus pneumoniae 670-6B]
gi|387759538|ref|YP_006066516.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae INV200]
gi|405760680|ref|YP_006701276.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae SPNA45]
gi|410476771|ref|YP_006743530.1| spermidine/putrescine ABC transporter substrate-binding protein
[Streptococcus pneumoniae gamPNI0373]
gi|415699264|ref|ZP_11457534.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 459-5]
gi|415749808|ref|ZP_11477752.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SV35]
gi|415752496|ref|ZP_11479607.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SV36]
gi|417677109|ref|ZP_12326518.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17545]
gi|417686830|ref|ZP_12336106.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41301]
gi|417694278|ref|ZP_12343466.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47901]
gi|417696562|ref|ZP_12345741.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47368]
gi|418092000|ref|ZP_12729142.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44452]
gi|418107809|ref|ZP_12744847.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41410]
gi|418110347|ref|ZP_12747370.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA49447]
gi|418112723|ref|ZP_12749723.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41538]
gi|418121471|ref|ZP_12758414.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44194]
gi|418123721|ref|ZP_12760653.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44378]
gi|418128263|ref|ZP_12765157.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP170]
gi|418130537|ref|ZP_12767420.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA07643]
gi|418132176|ref|ZP_12769051.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11304]
gi|418137452|ref|ZP_12774291.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11663]
gi|418139708|ref|ZP_12776534.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13338]
gi|418144322|ref|ZP_12781120.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13494]
gi|418155366|ref|ZP_12792095.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA16242]
gi|418160081|ref|ZP_12796780.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17227]
gi|418169400|ref|ZP_12806043.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19077]
gi|418176187|ref|ZP_12812781.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41437]
gi|418178442|ref|ZP_12815025.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41565]
gi|418180738|ref|ZP_12817308.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41688]
gi|418187372|ref|ZP_12823897.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47360]
gi|418193978|ref|ZP_12830469.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47439]
gi|418200302|ref|ZP_12836747.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47976]
gi|418219115|ref|ZP_12845781.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP127]
gi|418221427|ref|ZP_12848080.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47751]
gi|418225765|ref|ZP_12852393.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP112]
gi|418230104|ref|ZP_12856707.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae EU-NP01]
gi|418238934|ref|ZP_12865487.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NorthCarolina6A-23]
gi|419457806|ref|ZP_13997750.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02254]
gi|419460205|ref|ZP_14000134.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02270]
gi|419462551|ref|ZP_14002456.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02714]
gi|419466927|ref|ZP_14006809.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA05248]
gi|419471292|ref|ZP_14011151.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA07914]
gi|419473454|ref|ZP_14013304.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13430]
gi|419478033|ref|ZP_14017857.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA18068]
gi|419482443|ref|ZP_14022231.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40563]
gi|419489195|ref|ZP_14028944.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44386]
gi|419491317|ref|ZP_14031055.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47179]
gi|419504145|ref|ZP_14043814.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47760]
gi|419512715|ref|ZP_14052349.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA05578]
gi|419514905|ref|ZP_14054530.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae England14-9]
gi|419516989|ref|ZP_14056605.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02506]
gi|419521316|ref|ZP_14060911.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA05245]
gi|419526107|ref|ZP_14065669.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA14373]
gi|419532619|ref|ZP_14072134.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47794]
gi|421210888|ref|ZP_15667876.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070035]
gi|421232108|ref|ZP_15688749.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2080076]
gi|421238038|ref|ZP_15694608.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2071247]
gi|421243302|ref|ZP_15699820.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2081074]
gi|421245245|ref|ZP_15701743.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2081685]
gi|421247642|ref|ZP_15704126.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2082170]
gi|421249621|ref|ZP_15706078.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2082239]
gi|421270800|ref|ZP_15721655.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SPAR48]
gi|421272951|ref|ZP_15723793.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SPAR55]
gi|421275131|ref|ZP_15725960.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA52612]
gi|421283517|ref|ZP_15734304.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA04216]
gi|421296221|ref|ZP_15746932.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA58581]
gi|421298797|ref|ZP_15749484.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA60080]
gi|421313649|ref|ZP_15764239.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA47562]
gi|444394448|ref|ZP_21191999.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0002]
gi|444397828|ref|ZP_21195311.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0006]
gi|444401990|ref|ZP_21199167.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0008]
gi|444404486|ref|ZP_21201439.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0009]
gi|444407443|ref|ZP_21204110.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0010]
gi|444414693|ref|ZP_21210945.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0199]
gi|14972873|gb|AAK75484.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae TIGR4]
gi|147756616|gb|EDK63657.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP11-BS70]
gi|147761148|gb|EDK68116.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP18-BS74]
gi|147925050|gb|EDK76131.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP6-BS73]
gi|172042234|gb|EDT50280.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC1873-00]
gi|183574362|gb|EDT94890.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC0288-04]
gi|183578237|gb|EDT98765.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae MLV-016]
gi|194358375|gb|ACF56823.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae G54]
gi|220674587|emb|CAR69150.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae ATCC 700669]
gi|225720264|gb|ACO16118.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae 70585]
gi|301802127|emb|CBW34863.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae INV200]
gi|302598510|gb|EFL65552.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae BS455]
gi|302637246|gb|EFL67734.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP14-BS292]
gi|302639925|gb|EFL70381.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP-BS293]
gi|302642278|gb|EFL72626.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae BS458]
gi|302644601|gb|EFL74851.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae BS457]
gi|302646147|gb|EFL76374.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae BS397]
gi|306409576|gb|ADM85003.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
pneumoniae AP200]
gi|306484107|gb|ADM90976.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae 670-6B]
gi|332074708|gb|EGI85182.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17545]
gi|332074966|gb|EGI85438.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41301]
gi|332201837|gb|EGJ15907.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47368]
gi|332203215|gb|EGJ17283.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47901]
gi|353764100|gb|EHD44650.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44452]
gi|353779992|gb|EHD60456.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41410]
gi|353782550|gb|EHD62984.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA49447]
gi|353783085|gb|EHD63514.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41538]
gi|353792307|gb|EHD72679.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44194]
gi|353796382|gb|EHD76725.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44378]
gi|353799261|gb|EHD79581.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP170]
gi|353801861|gb|EHD82161.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA07643]
gi|353807842|gb|EHD88111.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11304]
gi|353808773|gb|EHD89038.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13494]
gi|353820744|gb|EHE00927.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA16242]
gi|353821814|gb|EHE01990.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17227]
gi|353834585|gb|EHE14686.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19077]
gi|353841626|gb|EHE21681.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41437]
gi|353842501|gb|EHE22547.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41565]
gi|353845440|gb|EHE25482.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41688]
gi|353851122|gb|EHE31120.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47360]
gi|353859198|gb|EHE39153.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47439]
gi|353865349|gb|EHE45258.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47976]
gi|353874251|gb|EHE54107.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP127]
gi|353874737|gb|EHE54591.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47751]
gi|353880962|gb|EHE60776.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP112]
gi|353887626|gb|EHE67404.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae EU-NP01]
gi|353893336|gb|EHE73082.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NorthCarolina6A-23]
gi|353901009|gb|EHE76557.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11663]
gi|353905181|gb|EHE80620.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13338]
gi|379531024|gb|EHY96260.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02714]
gi|379531210|gb|EHY96445.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02270]
gi|379531679|gb|EHY96913.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02254]
gi|379538616|gb|EHZ03796.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA05245]
gi|379543640|gb|EHZ08789.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA05248]
gi|379546008|gb|EHZ11147.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA07914]
gi|379551808|gb|EHZ16901.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13430]
gi|379558367|gb|EHZ23403.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA14373]
gi|379565469|gb|EHZ30461.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA18068]
gi|379579572|gb|EHZ44476.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40563]
gi|379586737|gb|EHZ51587.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44386]
gi|379592679|gb|EHZ57494.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47179]
gi|379605139|gb|EHZ69890.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47794]
gi|379606822|gb|EHZ71569.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47760]
gi|379635454|gb|EIA00013.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae England14-9]
gi|379637185|gb|EIA01743.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA05578]
gi|379639062|gb|EIA03606.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02506]
gi|381310192|gb|EIC51025.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SV36]
gi|381316062|gb|EIC56817.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 459-5]
gi|381318102|gb|EIC58827.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SV35]
gi|395574761|gb|EJG35338.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070035]
gi|395594611|gb|EJG54846.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2080076]
gi|395603387|gb|EJG63523.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2071247]
gi|395607772|gb|EJG67868.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2081685]
gi|395608294|gb|EJG68389.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2081074]
gi|395613315|gb|EJG73343.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2082239]
gi|395613799|gb|EJG73825.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2082170]
gi|395867929|gb|EJG79049.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SPAR48]
gi|395873095|gb|EJG84187.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA52612]
gi|395874605|gb|EJG85688.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SPAR55]
gi|395881480|gb|EJG92529.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA04216]
gi|395896094|gb|EJH07062.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA58581]
gi|395900268|gb|EJH11206.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA60080]
gi|395914149|gb|EJH24993.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA47562]
gi|404277569|emb|CCM08104.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae SPNA45]
gi|406369716|gb|AFS43406.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus pneumoniae gamPNI0373]
gi|444259690|gb|ELU65999.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0002]
gi|444260485|gb|ELU66793.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0006]
gi|444267300|gb|ELU73209.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0008]
gi|444271039|gb|ELU76790.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0010]
gi|444276731|gb|ELU82272.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0009]
gi|444281355|gb|ELU86678.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0199]
Length = 356
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|418166983|ref|ZP_12803639.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17971]
gi|353830579|gb|EHE10709.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17971]
Length = 284
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|238854846|ref|ZP_04645176.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii 269-3]
gi|260664133|ref|ZP_05864986.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii SJ-7A-US]
gi|313472348|ref|ZP_07812840.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Lactobacillus
jensenii 1153]
gi|238832636|gb|EEQ24943.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii 269-3]
gi|239529795|gb|EEQ68796.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Lactobacillus
jensenii 1153]
gi|260562019|gb|EEX27988.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii SJ-7A-US]
Length = 357
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRT---RG 74
F KVK SY DL D ++ + L++ I + + FK L+ ++ +
Sbjct: 74 FTKVKQGGTSY---DLAVPSDYMITKMKKANLLDKIDTNKLSN-FKNLNPQFLHQSFDKH 129
Query: 75 KIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKY 134
++ PY WG + I Y K+ K D ++ W DLW P+ +I +V+S R+++G L
Sbjct: 130 NQYSIPYFWGTLGIIYN-DKYVKSD--EVQHWNDLWNPKWKNKILLVDSARDIMGFSLVS 186
Query: 135 MGASYNSNN 143
+G S N+ N
Sbjct: 187 LGYSMNTTN 195
>gi|187918495|ref|YP_001884058.1| spermidine/putrescine-binding protein [Borrelia hermsii DAH]
gi|119861343|gb|AAX17138.1| spermidine/putrescine-binding protein [Borrelia hermsii DAH]
Length = 349
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G I++ P WG M I Y K+K D+ + ++ L+ + I+M++SP+E IG LK
Sbjct: 118 GNIYSVPLFWGVMGILYNKTKV---DIEDMNEFDILFNEKYKKEIAMLDSPKENIGVALK 174
Query: 134 YMGASYNSNNI 144
+G S N +NI
Sbjct: 175 KLGYSLNEHNI 185
>gi|37520928|ref|NP_924305.1| periplasmic spermidine/putrescine-binding protein [Gloeobacter
violaceus PCC 7421]
gi|35211923|dbj|BAC89300.1| glr1359 [Gloeobacter violaceus PCC 7421]
Length = 361
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
+ PY+WG + +A +K ++ PI W+DLW P GR+ +++ EV+G L+ +G
Sbjct: 132 YTVPYQWGTVGLAVDTAKVKR----PISRWEDLWDPAFKGRVVLLDDEFEVLGMALQTLG 187
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
N+ + +Q+A + + Q
Sbjct: 188 FDKNTKD-PAQLAKARAKLAQ 207
>gi|389856673|ref|YP_006358916.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis ST1]
gi|353740391|gb|AER21398.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis ST1]
Length = 356
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y ++ P ++W+DLW E I +++ REV+G L+ +G
Sbjct: 132 YSIPYFWGTLGIVYNETMVEN----PPQEWEDLWSEEYRDNIMLIDGVREVMGFGLQSLG 187
Query: 137 ASYNSNN 143
S NSNN
Sbjct: 188 YSLNSNN 194
>gi|303234048|ref|ZP_07320697.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna BVS033A4]
gi|302494973|gb|EFL54730.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna BVS033A4]
Length = 341
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 24/154 (15%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGK-- 75
+ KVK ++Y D+V D I++ ++E I D+ K + K+ R K
Sbjct: 62 YMKVKEGGSNY---DVVVPSDYMAEKMIKQGMLEKI------DYSKIPNFKYIDQRFKNL 112
Query: 76 ------IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIG 129
+ PY WG + I Y K+K ++ ++ W LW + I M+NS R+ +G
Sbjct: 113 DYDPKNEYTVPYMWGTVGILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRDTLG 168
Query: 130 SVLKYMGASYNSNNIDSQVAGGKVAV--QQNLAL 161
LK +G S NS N D+++ K ++ Q++L L
Sbjct: 169 VALKRLGYSMNSRN-DAELEKAKQSLIKQKDLVL 201
>gi|223933871|ref|ZP_03625836.1| extracellular solute-binding protein family 1 [Streptococcus suis
89/1591]
gi|302023707|ref|ZP_07248918.1| spermidine/putrescine ABC transporter periplasmic substrate-binding
protein [Streptococcus suis 05HAS68]
gi|330832742|ref|YP_004401567.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis ST3]
gi|386584009|ref|YP_006080412.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis D9]
gi|223897460|gb|EEF63856.1| extracellular solute-binding protein family 1 [Streptococcus suis
89/1591]
gi|329306965|gb|AEB81381.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis ST3]
gi|353736155|gb|AER17164.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis D9]
Length = 356
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y ++ P ++W+DLW E I +++ REV+G L+ +G
Sbjct: 132 YSIPYFWGTLGIVYNETMVEN----PPQEWEDLWSEEYRDNIMLIDGVREVMGFGLQSLG 187
Query: 137 ASYNSNN 143
S NSNN
Sbjct: 188 YSLNSNN 194
>gi|421217982|ref|ZP_15674879.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070335]
gi|395583743|gb|EJG44177.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070335]
Length = 284
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|398876735|ref|ZP_10631888.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398203883|gb|EJM90696.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 365
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 23/160 (14%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIE-------PIAGGEDQDWFK 63
F++L K+ + Y DLV LS AI+ I+ P G +++ +
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIQSGAIQTLNLQRLPHFAGVGEEFRQ 115
Query: 64 CLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR----- 117
H G +A Y WG + Y++ +K AP + W L+ P + +
Sbjct: 116 ---HMAVFDPGNRYAGIYAWGTTGVGYQEEAVKKRLPEAPTDSWAMLFDPAVVSKFADCG 172
Query: 118 ISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
+S++N P EV +V+KYMG N N+D K+A QQ
Sbjct: 173 VSLLNDPNEVFAAVMKYMGLDINRQNLDDL----KLAEQQ 208
>gi|418162436|ref|ZP_12799119.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17328]
gi|419423247|ref|ZP_13963461.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA43264]
gi|353827408|gb|EHE07560.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17328]
gi|379586411|gb|EHZ51263.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA43264]
Length = 284
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|325662007|ref|ZP_08150626.1| hypothetical protein HMPREF0490_01364 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471670|gb|EGC74889.1| hypothetical protein HMPREF0490_01364 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 625
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K + PI+ W LW I M +S R+ LKY+G
Sbjct: 402 YSVPYCWGTVGILYNKKMVEE----PIDSWSVLWDETYKDNILMQDSVRDAFAVALKYLG 457
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D A + ++Q
Sbjct: 458 YSLNSTDLDELEAAKALLIEQ 478
>gi|418098713|ref|ZP_12735812.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 6901-05]
gi|418173727|ref|ZP_12810340.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41277]
gi|419534838|ref|ZP_14074339.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17457]
gi|353770073|gb|EHD50589.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 6901-05]
gi|353838544|gb|EHE18622.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41277]
gi|379564186|gb|EHZ29183.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17457]
Length = 284
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|146318462|ref|YP_001198174.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis 05ZYH33]
gi|253751596|ref|YP_003024737.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis SC84]
gi|253753497|ref|YP_003026638.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis P1/7]
gi|253755677|ref|YP_003028817.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis BM407]
gi|386577784|ref|YP_006074190.1| family 1 extracellular solute-binding protein [Streptococcus suis
GZ1]
gi|386579839|ref|YP_006076244.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis JS14]
gi|386581783|ref|YP_006078187.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis SS12]
gi|386586134|ref|YP_006082536.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis D12]
gi|386588019|ref|YP_006084420.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis A7]
gi|403061422|ref|YP_006649638.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis S735]
gi|145689268|gb|ABP89774.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
suis 05ZYH33]
gi|251815885|emb|CAZ51496.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis SC84]
gi|251818141|emb|CAZ55938.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis BM407]
gi|251819743|emb|CAR45608.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis P1/7]
gi|292558247|gb|ADE31248.1| extracellular solute-binding protein, family 1 [Streptococcus suis
GZ1]
gi|319758031|gb|ADV69973.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis JS14]
gi|353733929|gb|AER14939.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis SS12]
gi|353738280|gb|AER19288.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis D12]
gi|354985180|gb|AER44078.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis A7]
gi|402808748|gb|AFR00240.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis S735]
Length = 356
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y ++ P ++W+DLW E I +++ REV+G L+ +G
Sbjct: 132 YSIPYFWGTLGIVYNETMVEN----PPQEWEDLWSEEYRDNIMLIDGVREVMGFGLQSLG 187
Query: 137 ASYNSNN 143
S NSNN
Sbjct: 188 YSLNSNN 194
>gi|224368487|ref|YP_002602650.1| protein PotD1 [Desulfobacterium autotrophicum HRM2]
gi|223691203|gb|ACN14486.1| PotD1 [Desulfobacterium autotrophicum HRM2]
Length = 343
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ PY WG+ +A+ + ++ WKDLWRPE R+ M + REV G L
Sbjct: 117 GNLYSIPYVWGSTAMAFNRDHVNPGNMT---SWKDLWRPEFKNRLVMNDDLREVFGVGLI 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALLQN 164
G S N D+ A K A + L+ N
Sbjct: 174 VNGFSVN----DTDPAHIKTAFESIKTLMPN 200
>gi|442804688|ref|YP_007372837.1| spermidine/putrescine transport system substarte-binding protein
PotD [Clostridium stercorarium subsp. stercorarium DSM
8532]
gi|442740538|gb|AGC68227.1| spermidine/putrescine transport system substarte-binding protein
PotD [Clostridium stercorarium subsp. stercorarium DSM
8532]
Length = 352
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 62 FKCLSHKWKRTR---GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRI 118
FK +S ++K ++ PY WG + I Y + ++ W LW + AG+I
Sbjct: 109 FKYVSDRFKNLNYDPTNEYSVPYFWGTLGILYNTEMVDEE----VDSWDILWNEKYAGKI 164
Query: 119 SMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
M++S R+ IG LK +G S N+ + + ++ +QQ
Sbjct: 165 LMLDSMRDTIGVALKKLGYSLNTTDTEKLEQAKQLLIQQ 203
>gi|225870494|ref|YP_002746441.1| spermidine/putrescine extracellular binding protein [Streptococcus
equi subsp. equi 4047]
gi|225699898|emb|CAW93805.1| spermidine/putrescine extracellular binding protein [Streptococcus
equi subsp. equi 4047]
Length = 357
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K AP+ W+DLWRPE I +V+ RE++G L G
Sbjct: 133 YSIPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYQNSIMLVDGAREILGVGLTTFG 188
Query: 137 ASYNSNNIDSQVAGGK 152
S NS ++ A K
Sbjct: 189 YSVNSKHLKQLEAAEK 204
>gi|428311756|ref|YP_007122733.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
gi|428253368|gb|AFZ19327.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
Length = 378
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSV 131
G ++ P WG + Y K ++ AP EDW LW + +L+ R++++N REV+G+
Sbjct: 151 GNQYSVPVSWGTTGLIYNPKKLKQ---AP-EDWSYLWENQQQLSKRMTLLNDVREVMGAT 206
Query: 132 LKYMGASYNSNN 143
LK +G SYNS +
Sbjct: 207 LKMLGYSYNSTD 218
>gi|421452923|ref|ZP_15902279.1| Spermidine/putrescine-binding protein [Streptococcus salivarius
K12]
gi|400181232|gb|EJO15499.1| Spermidine/putrescine-binding protein [Streptococcus salivarius
K12]
Length = 355
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K AP + W DLW PE +I +V+ REV+G L +G
Sbjct: 131 YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMLVDGAREVLGFSLNSLG 186
Query: 137 ASYNSNNI 144
S N+ N+
Sbjct: 187 YSLNTKNM 194
>gi|419523754|ref|ZP_14063331.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13723]
gi|379556929|gb|EHZ21977.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13723]
Length = 284
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|417925726|ref|ZP_12569144.1| ABC transporter, solute-binding protein [Finegoldia magna
SY403409CC001050417]
gi|341590933|gb|EGS34151.1| ABC transporter, solute-binding protein [Finegoldia magna
SY403409CC001050417]
Length = 341
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 24/154 (15%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGK-- 75
+ KVK ++Y D+V D I++ ++E I D+ K + K+ R K
Sbjct: 62 YMKVKEGGSNY---DVVVPSDYMAEKMIKQGMLEKI------DYSKIPNFKYIDQRFKNL 112
Query: 76 ------IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIG 129
+ PY WG + I Y K+K ++ ++ W LW + I M+NS R+ +G
Sbjct: 113 DYDPKNEYTVPYMWGTVGILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRDTLG 168
Query: 130 SVLKYMGASYNSNNIDSQVAGGKVAV--QQNLAL 161
LK +G S NS N D+++ K ++ Q++L L
Sbjct: 169 VALKRLGYSMNSRN-DAELEKAKQSLIKQKDLVL 201
>gi|319946702|ref|ZP_08020936.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus australis
ATCC 700641]
gi|417920882|ref|ZP_12564381.1| ABC transporter, solute-binding protein [Streptococcus australis
ATCC 700641]
gi|319746750|gb|EFV99009.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus australis
ATCC 700641]
gi|342828006|gb|EGU62386.1| ABC transporter, solute-binding protein [Streptococcus australis
ATCC 700641]
Length = 356
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + D AP E W+DLWRPE I M + REV+G L +G
Sbjct: 132 YSVPYFWGTLGIIYNS---KMVDKAP-EHWEDLWRPEYKNDIMMYDGAREVMGIGLNSLG 187
Query: 137 ASYNSNN 143
S NS +
Sbjct: 188 YSLNSKD 194
>gi|138894300|ref|YP_001124753.1| spermidine/putrescine ABC transporter substrate-binding protein
[Geobacillus thermodenitrificans NG80-2]
gi|196248099|ref|ZP_03146801.1| extracellular solute-binding protein family 1 [Geobacillus sp.
G11MC16]
gi|134265813|gb|ABO66008.1| Spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Geobacillus thermodenitrificans NG80-2]
gi|196212883|gb|EDY07640.1| extracellular solute-binding protein family 1 [Geobacillus sp.
G11MC16]
Length = 357
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + I DW DLW P L +I +V+ REV+G L +G
Sbjct: 132 YSVPYFWGTVGIVYNREMLGG---KTITDWNDLWDPSLRNQILLVDGAREVMGMALNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|398922523|ref|ZP_10660315.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398162606|gb|EJM50794.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 365
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++L K+ + Y DLV LS AIE ++ + + F + +++
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIESGAVQAV-DKQQLPHFAGVGEEFR 114
Query: 71 RTR-----GKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----IS 119
+ G +A Y WG + Y++ ++ AP + W L+ P + + +S
Sbjct: 115 QHMAVFDPGNRYAGIYAWGTTGVGYQEQAVKQRLPDAPTDSWAMLFDPAVVSKFADCGVS 174
Query: 120 MVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
++N P EV +V+KYMG N N+D K+A QQ
Sbjct: 175 LLNDPNEVFAAVMKYMGLDINRQNLDDL----KLAEQQ 208
>gi|388470108|ref|ZP_10144317.1| periplasmic putrescine-binding protein, PotF family [Pseudomonas
synxantha BG33R]
gi|388006805|gb|EIK68071.1| periplasmic putrescine-binding protein, PotF family [Pseudomonas
synxantha BG33R]
Length = 366
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +A PY WG I Y +K D AP++ W +++ E R ++M+++P E
Sbjct: 123 GNRFAVPYLWGTTGIGYDVAKVHALLGDNAPVDSWDLIFKEENLARLGECGVAMLDAPAE 182
Query: 127 VIGSVLKYMGASYNSNNIDSQV 148
+I L Y+G YNS N D V
Sbjct: 183 IIPIALHYLGLPYNSQNPDDYV 204
>gi|398924046|ref|ZP_10661018.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398174003|gb|EJM61813.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 365
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++L K+ + Y DLV LS AIE ++ + + F + +++
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIESGAVQTV-DKQQLPHFAGVGEEFR 114
Query: 71 RTR-----GKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----IS 119
+ G +A Y WG + Y++ ++ AP + W L+ P + + +S
Sbjct: 115 QHMAVFDPGNRYAGIYAWGTTGVGYQEQAVKQRLPDAPTDSWAMLFDPAVVSKFADCGVS 174
Query: 120 MVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
++N P EV +V+KYMG N N+D K+A QQ
Sbjct: 175 LLNDPNEVFAAVMKYMGLDINRQNLDDL----KLAEQQ 208
>gi|428211500|ref|YP_007084644.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
gi|427999881|gb|AFY80724.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
Length = 376
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSV 131
G ++ P+ WG + Y ++ P +DW+ LW + EL+ R++++N REV+G+
Sbjct: 149 GNRYSVPFTWGTTGLIYNSARLS----TPPDDWEYLWTHQSELSRRLTLMNDVREVMGAG 204
Query: 132 LKYMGASYNSNN 143
L+ +G SYNS +
Sbjct: 205 LRSLGYSYNSTD 216
>gi|422867465|ref|ZP_16914045.1| putative spermidine/putrescine ABC transporter [Enterococcus
faecalis TX1467]
gi|329577407|gb|EGG58862.1| putative spermidine/putrescine ABC transporter [Enterococcus
faecalis TX1467]
Length = 357
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLWRP + + +++ REV+G L +G
Sbjct: 132 FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPSIKNNVMLIDGAREVLGLSLNSLG 188
Query: 137 ASYNSNNIDSQV 148
S NS N D Q+
Sbjct: 189 YSLNSKN-DQQL 199
>gi|195978177|ref|YP_002123421.1| spermidine putrescineABC transporter substrate-binding protein PotD
[Streptococcus equi subsp. zooepidemicus MGCS10565]
gi|195974882|gb|ACG62408.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Streptococcus equi subsp. zooepidemicus MGCS10565]
Length = 357
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K AP+ W+DLWRPE I +V+ RE++G L G
Sbjct: 133 YSIPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYQNSIMLVDGAREILGVGLTTFG 188
Query: 137 ASYNSNNI 144
S NS ++
Sbjct: 189 YSVNSKHL 196
>gi|428206397|ref|YP_007090750.1| extracellular solute-binding protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428008318|gb|AFY86881.1| extracellular solute-binding protein family 1 [Chroococcidiopsis
thermalis PCC 7203]
Length = 373
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGA 137
P WG Y + ++ P DW+ LW R +L+GR+++++ REV+G+ L+ +G
Sbjct: 153 PMSWGTTGFVYNTQQLKE----PPTDWEYLWKNRQQLSGRMTLIDDVREVMGATLRMLGY 208
Query: 138 SYNSNNIDSQV 148
SYNS + +SQ+
Sbjct: 209 SYNSKD-ESQI 218
>gi|417848611|ref|ZP_12494547.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus mitis SK1080]
gi|339457874|gb|EGP70431.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus mitis SK1080]
Length = 356
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNIDSQ 147
+G S NS DSQ
Sbjct: 185 SLGYSLNSK--DSQ 196
>gi|385262202|ref|ZP_10040317.1| ABC transporter, solute-binding protein [Streptococcus sp. SK643]
gi|385191943|gb|EIF39355.1| ABC transporter, solute-binding protein [Streptococcus sp. SK643]
Length = 356
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L
Sbjct: 128 KGNKFSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKNSIMLFDGAREVLGLGL 183
Query: 133 KYMGASYNSNN 143
+G S NS +
Sbjct: 184 NSLGYSLNSKD 194
>gi|398872673|ref|ZP_10627958.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398202048|gb|EJM88905.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 365
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 21/159 (13%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAG------GEDQDWFKC 64
F++L K+ + Y DLV LS AIE ++ I E + F+
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIESGAVQTIDKQQLPHFAEVGEEFR- 114
Query: 65 LSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----I 118
H G A Y WG + Y++ +K AP + W L+ P + + +
Sbjct: 115 -QHMAAFDPGNRHAGIYAWGTTGVGYQEQAVKKRLPDAPTDSWAMLFDPAVVSKFADCGV 173
Query: 119 SMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
S++N P EV +V+KYMG N N+D K+A QQ
Sbjct: 174 SLLNDPNEVFAAVMKYMGLDINRQNLDDL----KLAEQQ 208
>gi|113476392|ref|YP_722453.1| extracellular solute-binding protein [Trichodesmium erythraeum
IMS101]
gi|110167440|gb|ABG51980.1| extracellular solute-binding protein, family 1 [Trichodesmium
erythraeum IMS101]
Length = 353
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSV 131
G + P WG + Y P DWK LW + + R+++VN REVIG
Sbjct: 127 GNTHSVPISWGTTGLIYNSKLLS----TPPNDWKYLWENQDLVLKRMTLVNDVREVIGCA 182
Query: 132 LKYMGASYNSNNIDSQVAGGKVAVQQNLAL 161
L+ +G SYNS N+D+ K A Q+ L L
Sbjct: 183 LRKLGYSYNSTNVDNI----KEAYQELLTL 208
>gi|225551823|ref|ZP_03772766.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia sp. SV1]
gi|225371618|gb|EEH01045.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia sp. SV1]
Length = 348
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNLYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNKKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N ++ D G++ QN L+
Sbjct: 174 KLGYSINEHDTDKIKEAGELLKIQNPLLI 202
>gi|224533330|ref|ZP_03673924.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi CA-11.2a]
gi|225548909|ref|ZP_03769886.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi 94a]
gi|224513495|gb|EEF83852.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi CA-11.2a]
gi|225370512|gb|EEG99948.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi 94a]
Length = 348
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNLYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNKKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N ++ D G++ QN L+
Sbjct: 174 KLGYSINEHDTDKIKEAGELLKIQNPLLI 202
>gi|365902359|ref|ZP_09440182.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
malefermentans KCTC 3548]
Length = 357
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + + ++ W DLW+P+ +I +++S R+V+G L M
Sbjct: 132 YSVPYFWGTLGIIYNDQSIKPEE---VQHWNDLWQPKFKNKIMLIDSTRDVLGFSLVSMN 188
Query: 137 ASYNSNN 143
S N+ N
Sbjct: 189 QSMNTTN 195
>gi|421307103|ref|ZP_15757749.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA60132]
gi|395909066|gb|EJH19943.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA60132]
Length = 356
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIIYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|223889495|ref|ZP_03624081.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi 64b]
gi|223885181|gb|EEF56285.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi 64b]
Length = 348
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNLYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNKKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N ++ D G++ QN L+
Sbjct: 174 KLGYSINEHDTDKIKEAGELLKIQNPLLI 202
>gi|15594984|ref|NP_212773.1| spermidine/putrescine ABC transporter substrate-binding protein
[Borrelia burgdorferi B31]
gi|216264916|ref|ZP_03436908.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi 156a]
gi|221217986|ref|ZP_03589453.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi 72a]
gi|225549909|ref|ZP_03770870.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi 118a]
gi|387826275|ref|YP_005805728.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi JD1]
gi|2688565|gb|AAB91528.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi B31]
gi|215981389|gb|EEC22196.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi 156a]
gi|221192292|gb|EEE18512.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi 72a]
gi|225369368|gb|EEG98820.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi 118a]
gi|312147739|gb|ADQ30398.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi JD1]
Length = 348
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNLYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNKKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N ++ D G++ QN L+
Sbjct: 174 KLGYSINEHDTDKIKEAGELLKIQNPLLI 202
>gi|226321337|ref|ZP_03796864.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi Bol26]
gi|226233133|gb|EEH31885.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi Bol26]
Length = 348
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNLYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNKKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N ++ D G++ QN L+
Sbjct: 174 KLGYSINEHDTDKIKEAGELLKIQNPLLI 202
>gi|414564078|ref|YP_006043039.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Streptococcus equi subsp. zooepidemicus ATCC
35246]
gi|338847143|gb|AEJ25355.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Streptococcus equi subsp. zooepidemicus ATCC
35246]
Length = 357
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K AP+ W+DLWRPE I +V+ RE++G L G
Sbjct: 133 YSIPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYRNSIMLVDGAREILGVGLTTFG 188
Query: 137 ASYNSNNIDSQVAGGK 152
S NS ++ A K
Sbjct: 189 YSVNSKHLKQLEAAEK 204
>gi|322373437|ref|ZP_08047973.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
C150]
gi|321278479|gb|EFX55548.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
C150]
Length = 355
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K AP + W DLW P+ +I +V+ REVIG L +G
Sbjct: 131 YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPDYKDQIMLVDGAREVIGFSLNSLG 186
Query: 137 ASYNSNNI 144
S N+ N+
Sbjct: 187 YSLNTKNM 194
>gi|224532964|ref|ZP_03673572.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi WI91-23]
gi|224512081|gb|EEF82474.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi WI91-23]
Length = 348
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNLYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNKKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N ++ D G++ QN L+
Sbjct: 174 KLGYSINEHDTDKIKEAGELLKIQNPLLI 202
>gi|195941459|ref|ZP_03086841.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein (potD)
[Borrelia burgdorferi 80a]
gi|387827539|ref|YP_005806821.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi N40]
gi|312149073|gb|ADQ29144.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi N40]
Length = 348
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNLYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNKKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N ++ D G++ QN L+
Sbjct: 174 KLGYSINEHDTDKIKEAGELLKIQNPLLI 202
>gi|331003545|ref|ZP_08327042.1| hypothetical protein HMPREF0491_01904 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412386|gb|EGG91777.1| hypothetical protein HMPREF0491_01904 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 368
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 16/141 (11%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKIW------AAPYRWGA 85
D+V D L AI++ L+ + D+ + +GK + PY G
Sbjct: 96 DVVIADDYILELAIKEGLVAEL----DKSKISTYENINPLFQGKFYDPENKYTIPYGAGI 151
Query: 86 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 145
+I Y + I ++DLW+PEL G + +V + R + G LK +G S+N+++++
Sbjct: 152 PLIVYNPDTVKTE----ITGYEDLWKPELEGNVGIVGNYRVIDGITLKTLGYSFNTDDLN 207
Query: 146 S-QVAGGKV-AVQQNLALLQN 164
Q AG K+ + +N+ L+ +
Sbjct: 208 QIQQAGDKLKTLAKNIRLISD 228
>gi|300813078|ref|ZP_07093456.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313123351|ref|YP_004033610.1| spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|422845339|ref|ZP_16892049.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
gi|300495919|gb|EFK31063.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312279914|gb|ADQ60633.1| Spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|325684511|gb|EGD26675.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 360
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K I+ W DLW+ + G+I +V+S R+++G L MG
Sbjct: 134 YSVPYFWGTLGIVYNDRYVKK---GEIKSWNDLWKKKYQGQILLVDSARDIMGMSLVSMG 190
Query: 137 ASYNSNN 143
S N N
Sbjct: 191 YSMNDTN 197
>gi|197301810|ref|ZP_03166880.1| hypothetical protein RUMLAC_00536 [Ruminococcus lactaris ATCC
29176]
gi|197299250|gb|EDY33780.1| ABC transporter, solute-binding protein [Ruminococcus lactaris ATCC
29176]
Length = 626
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K + P++ W LW + I M +S R+ LKY+G
Sbjct: 403 YSVPYLWGTVGILYNKKMVDE----PVDSWGILWDKKYEDSILMQDSVRDAFAVALKYLG 458
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D A + ++Q
Sbjct: 459 YSLNSTDLDELEAAKNLLIEQ 479
>gi|148985661|ref|ZP_01818815.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP3-BS71]
gi|387757664|ref|YP_006064643.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae OXC141]
gi|418232391|ref|ZP_12858978.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA07228]
gi|418236848|ref|ZP_12863416.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19690]
gi|419480239|ref|ZP_14020044.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19101]
gi|419499935|ref|ZP_14039629.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47597]
gi|147922142|gb|EDK73264.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP3-BS71]
gi|301800253|emb|CBW32872.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae OXC141]
gi|353887118|gb|EHE66898.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA07228]
gi|353893080|gb|EHE72828.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19690]
gi|379570193|gb|EHZ35157.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19101]
gi|379599243|gb|EHZ64026.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47597]
gi|429316292|emb|CCP35974.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae SPN034156]
gi|429319634|emb|CCP32927.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae SPN034183]
gi|429321451|emb|CCP34901.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae SPN994039]
gi|429323271|emb|CCP30942.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae SPN994038]
Length = 356
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS +
Sbjct: 185 SLGYSLNSKEL 195
>gi|418029113|ref|ZP_12667661.1| hypothetical protein LDBUL1632_00455 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354690831|gb|EHE90773.1| hypothetical protein LDBUL1632_00455 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 360
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K I+ W DLW+ + G+I +V+S R+++G L MG
Sbjct: 134 YSVPYFWGTLGIVYNDRYVKK---GEIKSWNDLWKKKYQGQILLVDSARDIMGMSLVSMG 190
Query: 137 ASYNSNN 143
S N N
Sbjct: 191 YSMNDTN 197
>gi|333995831|ref|YP_004528444.1| putative spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Treponema
azotonutricium ZAS-9]
gi|333735702|gb|AEF81651.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Treponema
azotonutricium ZAS-9]
Length = 353
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDW--FKCLSHKWKRTRGKIWAAPYRWGAMMIA 89
DLV D + A+EK L + + + +++ + K + PY G I
Sbjct: 83 DLVIADDYIIETAVEKGLAQKLDKSKIKNYSGINPIYQKQFYDLRDEYTVPYGAGVQTIV 142
Query: 90 YKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DSQV 148
Y S + I + DLW P L I + + R + G LK +G SYN+ NI D Q
Sbjct: 143 YDPSTVK----VKISGYADLWDPSLRNSIGTIENYRVINGMALKVLGKSYNTENIADIQA 198
Query: 149 AGGKV-AVQQNLALLQN 164
AG ++ A+ N+ L+++
Sbjct: 199 AGDRLTALAPNIRLIKD 215
>gi|146320655|ref|YP_001200366.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis 98HAH33]
gi|145691461|gb|ABP91966.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
suis 98HAH33]
Length = 284
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y ++ P ++W+DLW E I +++ REV+G L+ +G
Sbjct: 60 YSIPYFWGTLGIVYNETMVEN----PPQEWEDLWSEEYRDNIMLIDGVREVMGFGLQSLG 115
Query: 137 ASYNSNN 143
S NSNN
Sbjct: 116 YSLNSNN 122
>gi|104773746|ref|YP_618726.1| spermidine/putrescine ABC transporter substrate-binding protein
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
gi|103422827|emb|CAI97479.1| Spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
Length = 360
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K I+ W DLW+ + G+I +V+S R+++G L MG
Sbjct: 134 YSVPYFWGTLGIVYNDRYVKK---GEIKSWNDLWKKKYQGQILLVDSARDIMGMSLVSMG 190
Query: 137 ASYNSNN 143
S N N
Sbjct: 191 YSMNDTN 197
>gi|302380568|ref|ZP_07269033.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna ACS-171-V-Col3]
gi|302311511|gb|EFK93527.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna ACS-171-V-Col3]
Length = 341
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
+ PY WG + I Y K+K ++ ++ W LW + I M+NS R+ +G LK +G
Sbjct: 120 YTVPYMWGTVGILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRDTLGVALKRLG 175
Query: 137 ASYNSNNIDSQVAGGKVAV--QQNLAL 161
S NS N D+++ K ++ Q++L L
Sbjct: 176 YSMNSRN-DAELEKAKQSLIKQKDLVL 201
>gi|116513745|ref|YP_812651.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|385815365|ref|YP_005851756.1| Spermidine and putrescine periplasmatic ABC transporter
[Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|418035487|ref|ZP_12673944.1| hypothetical protein LDBUL1519_00644 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|116093060|gb|ABJ58213.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|325125402|gb|ADY84732.1| Spermidine and putrescine periplasmatic ABC transporter
[Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|354690476|gb|EHE90424.1| hypothetical protein LDBUL1519_00644 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 360
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K I+ W DLW+ + G+I +V+S R+++G L MG
Sbjct: 134 YSVPYFWGTLGIVYNDRYVKK---GEIKSWNDLWKKKYQGQILLVDSARDIMGMSLVSMG 190
Query: 137 ASYNSNN 143
S N N
Sbjct: 191 YSMNDTN 197
>gi|313679879|ref|YP_004057618.1| extracellular solute-binding protein [Oceanithermus profundus DSM
14977]
gi|313152594|gb|ADR36445.1| extracellular solute-binding protein family 1 [Oceanithermus
profundus DSM 14977]
Length = 341
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 15/119 (12%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTR------GKIWAAPYRWGA 85
DLV D +++ LI+P+ D D L + + + G ++ PY+WG
Sbjct: 71 DLVVPPDYYVAEMARAGLIQPL----DHDRIPNLKNLYPEFQNPDYDPGNRYSVPYQWGT 126
Query: 86 MMIAYKKSKFRKHDLAPIEDWKDLWRP-ELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
IAY+ S+ ++ P++ W + P + G +++ RE IG+ LKY+G S N +
Sbjct: 127 TGIAYRASEVKQ----PVDSWGVFFDPAQYQGPFLLLDEMRETIGAALKYLGYSLNDTD 181
>gi|255305953|ref|ZP_05350125.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile ATCC 43255]
gi|423090206|ref|ZP_17078514.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 70-100-2010]
gi|357556881|gb|EHJ38452.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 70-100-2010]
Length = 350
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG + I Y K + + P++ W LW P+ G I M +S R+ IG LK +G
Sbjct: 129 YSVAYMWGTLGILYNKKEVKD----PMDSWNILWNPKYKGNIMMFDSVRDTIGITLKKLG 184
Query: 137 ASYNSNN 143
S NS N
Sbjct: 185 YSMNSVN 191
>gi|254974578|ref|ZP_05271050.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-66c26]
gi|255091968|ref|ZP_05321446.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile CIP 107932]
gi|255313703|ref|ZP_05355286.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-76w55]
gi|255516385|ref|ZP_05384061.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-97b34]
gi|255649485|ref|ZP_05396387.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-37x79]
gi|260682651|ref|YP_003213936.1| spermidine/putrescine ABC transporter substrate-binding protein
[Clostridium difficile CD196]
gi|260686251|ref|YP_003217384.1| spermidine/putrescine ABC transporter substrate-binding protein
[Clostridium difficile R20291]
gi|306519559|ref|ZP_07405906.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
difficile QCD-32g58]
gi|384360232|ref|YP_006198084.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
difficile BI1]
gi|260208814|emb|CBA61720.1| spermidine/putrescine ABC transporter, substrate-binding
lipoprotein [Clostridium difficile CD196]
gi|260212267|emb|CBE03005.1| spermidine/putrescine ABC transporter, substrate-binding
lipoprotein [Clostridium difficile R20291]
Length = 350
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG + I Y K + + P++ W LW P+ G I M +S R+ IG LK +G
Sbjct: 129 YSVAYMWGTLGILYNKKEVKD----PMDSWNILWNPKYKGNIMMFDSVRDTIGITLKKLG 184
Query: 137 ASYNSNN 143
S NS N
Sbjct: 185 YSMNSVN 191
>gi|163847247|ref|YP_001635291.1| extracellular solute-binding protein [Chloroflexus aurantiacus
J-10-fl]
gi|222525088|ref|YP_002569559.1| family 1 extracellular solute-binding protein [Chloroflexus sp.
Y-400-fl]
gi|163668536|gb|ABY34902.1| extracellular solute-binding protein family 1 [Chloroflexus
aurantiacus J-10-fl]
gi|222448967|gb|ACM53233.1| extracellular solute-binding protein family 1 [Chloroflexus sp.
Y-400-fl]
Length = 383
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 21/134 (15%)
Query: 20 KVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSH------KWKRTR 73
KV+A ++ Y D+V D +A++ + E +A D+ L H +
Sbjct: 94 KVRAGNSGY---DIVVPSD----YAVQIMVAEGLAAPIDKSLLTNLVHIDPNLLDQYFDK 146
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVIG 129
G ++ PY +G IAY F I+ W ++ P + AG+ SM++ RE G
Sbjct: 147 GNAYSVPYMYGITGIAYNTKFFPNG----IDSWAAIFEPDQIAQFAGKFSMLDDARETPG 202
Query: 130 SVLKYMGASYNSNN 143
+ L+Y+G S NS +
Sbjct: 203 AALRYIGQSLNSTD 216
>gi|307706851|ref|ZP_07643653.1| bacterial extracellular solute-binding family protein
[Streptococcus mitis SK321]
gi|307617724|gb|EFN96889.1| bacterial extracellular solute-binding family protein
[Streptococcus mitis SK321]
Length = 356
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|403237367|ref|ZP_10915953.1| spermidine:putrescine ABC transporter [Bacillus sp. 10403023]
Length = 358
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + W DLW P L I V+ RE++G L
Sbjct: 129 GNQYSVPYFWGTVGIVYNPTMLDGKEFTS---WNDLWDPSLKNEIIFVDGAREIMGMGLN 185
Query: 134 YMGASYNSNNID 145
+G S N N+D
Sbjct: 186 SLGYSLNDTNLD 197
>gi|423081922|ref|ZP_17070517.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 002-P50-2011]
gi|423085526|ref|ZP_17073968.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 050-P50-2011]
gi|357549172|gb|EHJ31019.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 002-P50-2011]
gi|357549443|gb|EHJ31289.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 050-P50-2011]
Length = 350
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG + I Y K + + P++ W LW P+ G I M +S R+ IG LK +G
Sbjct: 129 YSVAYMWGTLGILYNKKEVKD----PMDSWDILWNPKYKGNIMMFDSVRDTIGITLKKLG 184
Query: 137 ASYNSNN 143
S NS N
Sbjct: 185 YSMNSVN 191
>gi|226946878|ref|YP_002801951.1| polyamine transporter periplasmic protein PotF [Azotobacter
vinelandii DJ]
gi|226721805|gb|ACO80976.1| Polyamine transporter periplasmic protein PotF [Azotobacter
vinelandii DJ]
Length = 371
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 20/148 (13%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGE-------DQDWF 62
+F++ + K+ A S+ Y D+V +P+L+ I+ + + + + D+D
Sbjct: 63 VFDSNEVLEAKLLAGSSGY---DVVVPSNPFLAKQIKAGVFQKLDRSKLPNWQNLDKDLL 119
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPE-----LA 115
K L G +A PY WG + I Y K + D AP++ W +++PE A
Sbjct: 120 KALE---PSDPGNQYAVPYMWGTIGIGYNVDKVKAALGDHAPVDSWDLVFKPENIEKLKA 176
Query: 116 GRISMVNSPREVIGSVLKYMGASYNSNN 143
+S ++SP E++ + L Y+G + +S N
Sbjct: 177 CGVSFLDSPTEMLPAALHYLGFAPDSGN 204
>gi|419493529|ref|ZP_14033255.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47210]
gi|379593704|gb|EHZ58516.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47210]
Length = 356
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|126698611|ref|YP_001087508.1| ABC transporter spermidine/putrescine solute-binding protein
[Clostridium difficile 630]
gi|255100064|ref|ZP_05329041.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-63q42]
gi|115250048|emb|CAJ67868.1| ABC-type transport system,spermidine/putrescine solute-binding
protein [Clostridium difficile 630]
Length = 350
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG + I Y K + + P++ W LW P+ G I M +S R+ IG LK +G
Sbjct: 129 YSVAYMWGTLGILYNKKEVKD----PMDSWNILWNPKYKGNIMMFDSVRDTIGITLKKLG 184
Query: 137 ASYNSNN 143
S NS N
Sbjct: 185 YSMNSVN 191
>gi|307701925|ref|ZP_07638934.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
mitis NCTC 12261]
gi|307616740|gb|EFN95928.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
mitis NCTC 12261]
Length = 356
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|417941003|ref|ZP_12584290.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK313]
gi|343388296|gb|EGV00882.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK313]
Length = 356
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMI---DEAP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|307709084|ref|ZP_07645543.1| bacterial extracellular solute-binding family protein
[Streptococcus mitis SK564]
gi|307620030|gb|EFN99147.1| bacterial extracellular solute-binding family protein
[Streptococcus mitis SK564]
Length = 356
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|169833734|ref|YP_001694820.1| ABC transporter substrate-binding protein - spermidine/putrescine
transport [Streptococcus pneumoniae Hungary19A-6]
gi|421289972|ref|ZP_15740723.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae GA54354]
gi|421305291|ref|ZP_15755947.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae GA62331]
gi|168996236|gb|ACA36848.1| ABC transporter substrate-binding protein - spermidine/putrescine
transport [Streptococcus pneumoniae Hungary19A-6]
gi|395889213|gb|EJH00224.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae GA54354]
gi|395905953|gb|EJH16858.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae GA62331]
Length = 356
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|119510563|ref|ZP_01629694.1| extracellular solute-binding protein, family 1 [Nodularia spumigena
CCY9414]
gi|119464830|gb|EAW45736.1| extracellular solute-binding protein, family 1 [Nodularia spumigena
CCY9414]
Length = 360
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 78 AAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKYM 135
+ P+ WG Y +K + P +DW LW+ + L RI+++N REV+G VL+ +
Sbjct: 138 SIPFNWGTTGFIYNSAKLKN----PPQDWDYLWQNQELLNRRITLLNDVREVMGGVLRML 193
Query: 136 GASYNSNN 143
G SYNS +
Sbjct: 194 GYSYNSQD 201
>gi|126665279|ref|ZP_01736261.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
ELB17]
gi|126629907|gb|EBA00523.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
ELB17]
Length = 348
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAP--IEDWKDLWRP--ELAGRISMVNSPREVI 128
+ + + PY WG + I Y++ DL P + W DL +P EL G+ISM+ ++I
Sbjct: 119 KAEDFGVPYFWGTIGIVYRQ------DLVPFAVSSWMDLLQPVEELHGKISMIGDRADMI 172
Query: 129 GSVLKYMGASYNSNNIDS 146
G LK +G S NS N D
Sbjct: 173 GVALKALGYSLNSTNEDE 190
>gi|404483050|ref|ZP_11018275.1| hypothetical protein HMPREF1135_01335 [Clostridiales bacterium
OBRC5-5]
gi|404344140|gb|EJZ70499.1| hypothetical protein HMPREF1135_01335 [Clostridiales bacterium
OBRC5-5]
Length = 366
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
+ PY G +I Y + I+ + DLW PELAG + ++ + R + G LK +G
Sbjct: 141 YTMPYGAGIPLIVYNPETVK----VDIQGYNDLWNPELAGNVGIIGNYRVIDGITLKSLG 196
Query: 137 ASYNSNNIDS-QVAGGKV 153
S+N+N++ Q AG K+
Sbjct: 197 YSFNTNDLTQIQEAGDKL 214
>gi|418966434|ref|ZP_13518173.1| ABC transporter, solute-binding protein [Streptococcus mitis SK616]
gi|383347632|gb|EID25609.1| ABC transporter, solute-binding protein [Streptococcus mitis SK616]
Length = 356
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|417848281|ref|ZP_12494227.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus mitis SK1073]
gi|339452807|gb|EGP65428.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus mitis SK1073]
Length = 356
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|339492479|ref|YP_004712772.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
gi|338799851|gb|AEJ03683.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 361
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 14/121 (11%)
Query: 47 KRLIEPIAGGEDQDWFKCLSH---KWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPI 103
++L+EPI +Q L H +W+ + G+ +A PY WG + IAY+ + + AP
Sbjct: 99 RKLLEPI----EQARLPALRHVARRWRDSCGR-YAVPYLWGTLGIAYRSDRIEQ---AP- 149
Query: 104 EDWKDLWRPELAG--RISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLAL 161
W DL +P I M+ +++ S L +G S N++++D A ++ Q+ A+
Sbjct: 150 RSWADLLKPARPAEPHIVMMEDHEDILASPLILLGHSINTSDLDQLKAAFELLRNQSEAV 209
Query: 162 L 162
L
Sbjct: 210 L 210
>gi|148652871|ref|YP_001279964.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1]
gi|148571955|gb|ABQ94014.1| extracellular solute-binding protein, family 1 [Psychrobacter sp.
PRwf-1]
Length = 374
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG+ IA KS+ D+ I W DLWRPE GR+ ++N R+V L +G
Sbjct: 149 FSVPYLWGSSGIAVNKSRI---DINSITSWNDLWRPEFEGRVMLMNDLRDVFTMGLLTLG 205
>gi|157961031|ref|YP_001501065.1| extracellular solute-binding protein [Shewanella pealeana ATCC
700345]
gi|157846031|gb|ABV86530.1| extracellular solute-binding protein family 1 [Shewanella pealeana
ATCC 700345]
Length = 361
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWF----KCLSHKWKRTRGKIWAAPYRWGAMM 87
DLV +L I+ + +P+ ++++ K L+ +A PY WG
Sbjct: 73 DLVVSSGSFLQRQIKVGVFQPLDKSRLKNYYHLDPKVLNIVQSFDEDNQYAVPYMWGTTG 132
Query: 88 IAYKKSKFRK-HDLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNS 141
I Y K + P+ W+ L++ E + S MV++P EV+ ++LKY+G + NS
Sbjct: 133 IGYNIDKAAQILGEQPLNTWELLFQAETVSKFSECGVAMVDAPSEVVSAMLKYLGKNPNS 192
Query: 142 NNID 145
N+D
Sbjct: 193 QNLD 196
>gi|336392100|ref|ZP_08573499.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. torquens KCTC 3535]
Length = 357
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + I+ W DLW P+L I +V+S R+++G L G
Sbjct: 132 YSVPYFWGTLGIIYNDQMING---SQIQHWNDLWSPKLRNNIMLVDSARDIMGMALISQG 188
Query: 137 ASYNSNNI 144
S N+ NI
Sbjct: 189 HSVNTTNI 196
>gi|422848795|ref|ZP_16895471.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK115]
gi|422860260|ref|ZP_16906904.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK330]
gi|325689816|gb|EGD31820.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK115]
gi|327469456|gb|EGF14925.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK330]
Length = 356
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I +++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMIIDGAREVMGIGLN 184
Query: 134 YMGASYNSNN 143
G S NS +
Sbjct: 185 SDGHSLNSKD 194
>gi|167630347|ref|YP_001680846.1| spermidine/putrescine abc transporter spermidine/putrescine-binding
protein [Heliobacterium modesticaldum Ice1]
gi|167593087|gb|ABZ84835.1| spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Heliobacterium
modesticaldum Ice1]
Length = 369
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS 138
Y WG IAY +K+ K PI W+DLW P+ GR+ ++N REV+G LK G S
Sbjct: 151 YTWGITGIAYN-TKYVKE---PISSWQDLWNPKYKGRLVLLNDSREVLGMALKKNGFS 204
>gi|336431153|ref|ZP_08611007.1| hypothetical protein HMPREF0991_00126 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336020075|gb|EGN49792.1| hypothetical protein HMPREF0991_00126 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 565
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 76 IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 135
+++ PY WG + I Y K+ + PI+ W LW + I M +S R+ LKY+
Sbjct: 404 LYSVPYCWGTVGILYNKTMVDE----PIDSWSVLWDEKYKDNILMQDSVRDAFAVALKYI 459
Query: 136 GASYNSNNIDSQVAGGKVAVQQ 157
GAS NS +++ ++ + Q
Sbjct: 460 GASLNSTDLNELEEAKQLLIDQ 481
>gi|306829751|ref|ZP_07462940.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus mitis ATCC
6249]
gi|304428102|gb|EFM31193.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus mitis ATCC
6249]
Length = 356
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMI---DEAP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|261418972|ref|YP_003252654.1| extracellular solute-binding protein [Geobacillus sp. Y412MC61]
gi|297531063|ref|YP_003672338.1| family 1 extracellular solute-binding protein [Geobacillus sp.
C56-T3]
gi|319765789|ref|YP_004131290.1| extracellular solute-binding protein [Geobacillus sp. Y412MC52]
gi|261375429|gb|ACX78172.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y412MC61]
gi|297254315|gb|ADI27761.1| extracellular solute-binding protein family 1 [Geobacillus sp.
C56-T3]
gi|317110655|gb|ADU93147.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y412MC52]
Length = 357
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRG------KIWAAPYRWGA 85
D+ D +S IE+ L+ P+ D D L + R ++ PY WG
Sbjct: 85 DVAVPSDYAISKMIEENLLLPL----DHDKLPNLQYIEPRFLNLPFDPHNRYSVPYFWGT 140
Query: 86 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
+ I Y + I W DLW P+L +I +V+ REV+G L +G S N N
Sbjct: 141 VGIVYNRDMLGG---KTITSWNDLWNPDLRNQILLVDGAREVMGMALNSLGYSLNDTN 195
>gi|154502785|ref|ZP_02039845.1| hypothetical protein RUMGNA_00599 [Ruminococcus gnavus ATCC 29149]
gi|153796668|gb|EDN79088.1| ABC transporter, solute-binding protein [Ruminococcus gnavus ATCC
29149]
Length = 627
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 76 IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 135
+++ PY WG + I Y K+ + PI+ W LW + I M +S R+ LKY+
Sbjct: 403 LYSVPYCWGTVGILYNKTMVDE----PIDSWSVLWDEKYKDNILMQDSVRDAFAVALKYI 458
Query: 136 GASYNSNNIDSQVAGGKVAVQQ 157
GAS NS +++ ++ + Q
Sbjct: 459 GASLNSTDLNELEEAKQLLIDQ 480
>gi|422821356|ref|ZP_16869549.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK353]
gi|324990784|gb|EGC22719.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK353]
Length = 356
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I +++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMIIDGAREVMGIGLN 184
Query: 134 YMGASYNSNN 143
G S NS +
Sbjct: 185 SDGHSLNSKD 194
>gi|402312595|ref|ZP_10831519.1| ABC transporter, solute-binding protein [Lachnospiraceae bacterium
ICM7]
gi|400369053|gb|EJP22056.1| ABC transporter, solute-binding protein [Lachnospiraceae bacterium
ICM7]
Length = 366
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
+ PY G +I Y + I+ + DLW PELAG + ++ + R + G LK +G
Sbjct: 141 YTMPYGAGIPLIVYNPETVK----VDIQGYNDLWNPELAGNVGIIGNYRVIDGITLKSLG 196
Query: 137 ASYNSNNIDS-QVAGGKV 153
S+N+N++ Q AG K+
Sbjct: 197 YSFNTNDLTQIQEAGDKL 214
>gi|289167592|ref|YP_003445861.1| ABC transporter, spermidine/putrescine-binding protein
[Streptococcus mitis B6]
gi|288907159|emb|CBJ21993.1| ABC transporter, spermidine/putrescine-binding protein
[Streptococcus mitis B6]
Length = 356
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNIDSQ 147
+G S NS DSQ
Sbjct: 185 SLGYSLNSK--DSQ 196
>gi|125717882|ref|YP_001035015.1| spermidine/putrescine ABC transporter substrate-binding protein
[Streptococcus sanguinis SK36]
gi|125497799|gb|ABN44465.1| Spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein, putative
[Streptococcus sanguinis SK36]
Length = 356
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + D AP E W DLWRPE I +++ REV+G L
Sbjct: 129 GNQYSIPYFWGTLGIVYNE---KMVDKAP-EHWNDLWRPEYKNSIMIIDGAREVMGIGLN 184
Query: 134 YMGASYNSNN 143
G S NS +
Sbjct: 185 SDGHSLNSKD 194
>gi|414075947|ref|YP_006995265.1| ABC-type spermidine/putrescine transport system periplasmic binding
component [Anabaena sp. 90]
gi|413969363|gb|AFW93452.1| ABC-type spermidine/putrescine transport system periplasmic binding
component [Anabaena sp. 90]
Length = 360
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWR--PELAGRISMVNSPREVIGSVLKY 134
++ P+ WG + Y K AP EDW+ LW+ +L R +++N REV+G+ L+
Sbjct: 138 YSIPFNWGTTGLLYNSEKLTN---AP-EDWEYLWQNQDQLNKRFTLLNDVREVMGATLRM 193
Query: 135 MGASYNSNN 143
+G SYNS N
Sbjct: 194 LGYSYNSQN 202
>gi|293365699|ref|ZP_06612408.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus oralis ATCC
35037]
gi|307703644|ref|ZP_07640586.1| bacterial extracellular solute-binding family protein
[Streptococcus oralis ATCC 35037]
gi|291316067|gb|EFE56511.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus oralis ATCC
35037]
gi|307623051|gb|EFO02046.1| bacterial extracellular solute-binding family protein
[Streptococcus oralis ATCC 35037]
Length = 356
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMI---DEAP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|428226280|ref|YP_007110377.1| extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
gi|427986181|gb|AFY67325.1| extracellular solute-binding protein family 1 [Geitlerinema sp. PCC
7407]
Length = 376
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSV 131
G + P WG + Y + RK P EDW+ LW +P L+ RI+++N REV+G+
Sbjct: 150 GNRHSVPMSWGTTGLVYNR---RKLQTVP-EDWRYLWDNQPMLSRRITLLNDMREVMGAT 205
Query: 132 LKYMGASYNSNN 143
L+ +G SYN+ +
Sbjct: 206 LRMLGYSYNAED 217
>gi|419782439|ref|ZP_14308248.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK610]
gi|383183543|gb|EIC76080.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK610]
Length = 356
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMI---DEAP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|164686480|ref|ZP_02210508.1| hypothetical protein CLOBAR_00045 [Clostridium bartlettii DSM
16795]
gi|164604491|gb|EDQ97956.1| ABC transporter, solute-binding protein [Clostridium bartlettii DSM
16795]
Length = 352
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 17/153 (11%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F+++ + K+ + + Y D+V V D + IEK L++ + ++D +S K
Sbjct: 62 FDDMEAMYQKINSGAGKY---DVVLVSDALMPRMIEKGLVQKL----NKDNIPNISQMDK 114
Query: 71 R------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSP 124
+ G ++ PY +G + + Y K ++ ++ W LW + +I M ++
Sbjct: 115 QYLDLDIDPGNQYSVPYMFGTVGLIYNKDVVKEK----VDSWDILWDEKYKDQIFMFDTY 170
Query: 125 REVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
R+ IG LK +G S NS N D ++ ++Q
Sbjct: 171 RDTIGVALKKLGYSLNSTNKDEINEAKELLLKQ 203
>gi|418076579|ref|ZP_12713814.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47502]
gi|353748282|gb|EHD28935.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47502]
Length = 356
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EYWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|270292484|ref|ZP_06198695.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
M143]
gi|270278463|gb|EFA24309.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
M143]
Length = 356
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|418974200|ref|ZP_13522122.1| ABC transporter, solute-binding protein [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|383345550|gb|EID23659.1| ABC transporter, solute-binding protein [Streptococcus
pseudopneumoniae ATCC BAA-960]
Length = 356
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKYSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|427730105|ref|YP_007076342.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
gi|427366024|gb|AFY48745.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
Length = 360
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKY 134
++ P+ WG + Y ++ AP EDW LW+ + L R++++N REV+G+VL+
Sbjct: 137 YSIPFNWGTTGLLYNSEILKQ---AP-EDWNYLWQNQALLNKRMTLLNDVREVMGAVLRM 192
Query: 135 MGASYNSNN 143
+G SYNS N
Sbjct: 193 LGYSYNSQN 201
>gi|257485769|ref|ZP_05639810.1| ABC transporter, periplasmic polyamine-binding protein [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 366
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++ + +KV A Y D+V L I +++P+ + +W S
Sbjct: 59 FDSAEIMQSKVMAGRTGY---DVVVATSNVLPSLITAGVLQPLDRSQLGNWSHLDSEILA 115
Query: 71 RTR----GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----IS 119
+ G +A PY WG I Y K + D AP++ W +++ E + ++
Sbjct: 116 KVSINDPGNRYAVPYLWGTTGIGYDVDKIKSALGDDAPVDSWDLVFKEENISKLQQCGVA 175
Query: 120 MVNSPREVIGSVLKYMGASYNSNNID 145
M++SP E+I L Y+G +NS N D
Sbjct: 176 MLDSPSEIISIALHYLGLPHNSKNPD 201
>gi|414158720|ref|ZP_11415013.1| hypothetical protein HMPREF9188_01287 [Streptococcus sp. F0441]
gi|410869375|gb|EKS17337.1| hypothetical protein HMPREF9188_01287 [Streptococcus sp. F0441]
Length = 356
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|342164026|ref|YP_004768665.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pseudopneumoniae IS7493]
gi|341933908|gb|AEL10805.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pseudopneumoniae IS7493]
Length = 356
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKYSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|333394556|ref|ZP_08476375.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis KCTC 3167]
gi|420145444|ref|ZP_14652910.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398402939|gb|EJN56224.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 357
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + I+ W DLW P+L I +V+S R+++G L G
Sbjct: 132 YSVPYFWGTLGIIYNDQMING---SQIQHWNDLWSPKLRNNIMLVDSARDIMGMALISQG 188
Query: 137 ASYNSNNI 144
S N+ NI
Sbjct: 189 HSVNTTNI 196
>gi|322375488|ref|ZP_08050001.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
C300]
gi|321279751|gb|EFX56791.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
C300]
Length = 356
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMI---DEAP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|443471975|ref|ZP_21062012.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
gi|442902200|gb|ELS27841.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
Length = 361
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDW-------FKCLSHKWKRTRGKIWAAPYRWG 84
DLV D +L ++ + +P+ + +W K L+ K G + PY WG
Sbjct: 72 DLVVPSDSFLPNYLKAGVFQPLDRSKLPNWQNLNPALLKVLAAK---DPGNQYVMPYMWG 128
Query: 85 AMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGA 137
IAY K + + AP++ W ++ P+ R ++ ++SP EVI VL Y+G
Sbjct: 129 TNGIAYNVDKVKAILGENAPLDSWDLVFNPDNLARLKQCGVAFLDSPTEVIPEVLHYLGL 188
Query: 138 SYNSNN 143
S NS N
Sbjct: 189 SPNSRN 194
>gi|421488388|ref|ZP_15935776.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK304]
gi|400367605|gb|EJP20620.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK304]
Length = 356
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|400289028|ref|ZP_10791060.1| extracellular solute-binding protein [Psychrobacter sp. PAMC 21119]
Length = 377
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 62 FKCLSHKWKRTR---GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRI 118
FK L + T+ ++ PY WG+ +A D A + W DLW P+ G++
Sbjct: 134 FKNLDTSFTNTKVDPENKYSIPYMWGSTGLAINGDTV---DPATVNSWNDLWDPKYKGQV 190
Query: 119 SMVNSPREVIGSVLKYMGASYNSNNID 145
+ N REV G L +G S NS N D
Sbjct: 191 MLTNDVREVFGMALLTLGYSGNSRNPD 217
>gi|418975432|ref|ZP_13523337.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK1074]
gi|383347787|gb|EID25761.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK1074]
Length = 356
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|417934209|ref|ZP_12577529.1| ABC transporter, solute-binding protein [Streptococcus mitis bv. 2
str. F0392]
gi|340770779|gb|EGR93294.1| ABC transporter, solute-binding protein [Streptococcus mitis bv. 2
str. F0392]
Length = 356
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|304440193|ref|ZP_07400083.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Peptoniphilus duerdenii
ATCC BAA-1640]
gi|304371242|gb|EFM24858.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Peptoniphilus duerdenii
ATCC BAA-1640]
Length = 353
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
+ PY G M I Y K+ + P WKDLW PE +I M NS R+ I LK +G
Sbjct: 128 YTVPYFSGTMGIVYNKTMVK----TPPTSWKDLWNPEYKRQIIMYNSQRDSIAIALKMLG 183
Query: 137 ASYNS 141
S NS
Sbjct: 184 YSMNS 188
>gi|146305384|ref|YP_001185849.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
gi|421505532|ref|ZP_15952470.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
gi|145573585|gb|ABP83117.1| extracellular solute-binding protein, family 1 [Pseudomonas
mendocina ymp]
gi|400343941|gb|EJO92313.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
Length = 365
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 20 KVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGE-------DQDWFKCLSHKWKRT 72
K+ A S+ Y D+V +P+L+ I+ + + + + DQD K L
Sbjct: 67 KLLAGSSGY---DVVVPSNPFLAKQIKAGVFQKLDKSKLPNWSNLDQDLLKALD---PSD 120
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPR 125
G ++ PY WG + I Y K + D AP++ W +++PE + +S ++SP
Sbjct: 121 PGNQYSIPYMWGTIGIGYNVDKVKAVLGDDAPVDSWDLVFKPENMEKLKSCGVSFLDSPT 180
Query: 126 EVIGSVLKYMGASYNSNNID 145
E++ + L Y+G + +S+ D
Sbjct: 181 EILPAALHYLGYAPDSSKAD 200
>gi|418087070|ref|ZP_12724240.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47033]
gi|418202613|ref|ZP_12839042.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA52306]
gi|421285322|ref|ZP_15736099.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae GA60190]
gi|353759331|gb|EHD39917.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47033]
gi|353867170|gb|EHE47065.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA52306]
gi|395887301|gb|EJG98316.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae GA60190]
Length = 356
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMIFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|418185163|ref|ZP_12821706.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA47283]
gi|353849234|gb|EHE29241.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA47283]
Length = 284
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMVYE---AP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|417794887|ref|ZP_12442122.1| putative spermidine/putrescine ABC transporter [Streptococcus
oralis SK255]
gi|334266749|gb|EGL85221.1| putative spermidine/putrescine ABC transporter [Streptococcus
oralis SK255]
Length = 356
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|306824977|ref|ZP_07458320.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sp. oral
taxon 071 str. 73H25AP]
gi|304432804|gb|EFM35777.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sp. oral
taxon 071 str. 73H25AP]
Length = 356
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|146280766|ref|YP_001170919.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Pseudomonas
stutzeri A1501]
gi|145568971|gb|ABP78077.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Pseudomonas stutzeri A1501]
Length = 361
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 14/121 (11%)
Query: 47 KRLIEPIAGGEDQDWFKCLSH---KWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPI 103
++L+EPI +Q L H +W+ + G+ +A PY WG + IAY+ + + AP
Sbjct: 99 RKLLEPI----EQARLPALRHVARRWRDSCGR-YAVPYLWGTLGIAYRSDRIEQ---AP- 149
Query: 104 EDWKDLWRPELAG--RISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLAL 161
W DL +P I M+ +++ S L +G S N++++D A ++ Q+ A+
Sbjct: 150 RSWADLLKPARPDEPHIVMMEDHEDILASPLILLGHSINTSDLDQLKAAFELLRSQSEAV 209
Query: 162 L 162
L
Sbjct: 210 L 210
>gi|392957073|ref|ZP_10322598.1| family 1 extracellular solute-binding protein [Bacillus macauensis
ZFHKF-1]
gi|391876975|gb|EIT85570.1| family 1 extracellular solute-binding protein [Bacillus macauensis
ZFHKF-1]
Length = 357
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY WG + I Y K + I W+DLW +L +I +V+ RE++G L
Sbjct: 128 RGNTYSVPYFWGTVGIVYNKKLLGNKN---ITSWQDLWDKDLRNKIFLVDGVREIMGIGL 184
Query: 133 KYMGASYNSNN 143
G S N N
Sbjct: 185 TTTGYSLNDTN 195
>gi|302130291|ref|ZP_07256281.1| ABC transporter, periplasmic polyamine-binding protein [Pseudomonas
syringae pv. tomato NCPPB 1108]
Length = 372
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++ + +KV A Y D+V L I +++P+ + +W S
Sbjct: 65 FDSAEIMQSKVMAGRTGY---DVVVATSNVLPSLITAGVLQPLDRSQLGNWSHLDSEILA 121
Query: 71 RTR----GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----IS 119
+ G +A PY WG I Y K + D AP++ W +++ E + ++
Sbjct: 122 KVSINDPGNRYAVPYLWGTTGIGYDVDKIKSALGDDAPVDSWDLVFKEENISKLQQCGVA 181
Query: 120 MVNSPREVIGSVLKYMGASYNSNNID 145
M++SP E+I L Y+G +NS N D
Sbjct: 182 MLDSPSEIISIALHYLGLPHNSKNPD 207
>gi|418962838|ref|ZP_13514687.1| ABC transporter, solute-binding protein [Streptococcus anginosus
subsp. whileyi CCUG 39159]
gi|383344814|gb|EID22964.1| ABC transporter, solute-binding protein [Streptococcus anginosus
subsp. whileyi CCUG 39159]
Length = 356
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + P + W DLWRPE I M++ REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNTELVKT---VP-KHWSDLWRPEYKNSIMMIDGAREVMGVGLNALG 187
Query: 137 ASYNSNN 143
S NS N
Sbjct: 188 YSLNSKN 194
>gi|168487385|ref|ZP_02711893.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC1087-00]
gi|419509928|ref|ZP_14049572.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP141]
gi|419529983|ref|ZP_14069514.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40028]
gi|421213408|ref|ZP_15670365.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070108]
gi|421215409|ref|ZP_15672334.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070109]
gi|183569782|gb|EDT90310.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC1087-00]
gi|379574723|gb|EHZ39661.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40028]
gi|379633121|gb|EHZ97690.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP141]
gi|395579640|gb|EJG40138.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070108]
gi|395580422|gb|EJG40904.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070109]
Length = 356
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMVYE---AP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|315613412|ref|ZP_07888321.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
ATCC 49296]
gi|315314647|gb|EFU62690.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
ATCC 49296]
Length = 356
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|376262419|ref|YP_005149139.1| spermidine/putrescine-binding periplasmic protein [Clostridium sp.
BNL1100]
gi|373946413|gb|AEY67334.1| spermidine/putrescine-binding periplasmic protein [Clostridium sp.
BNL1100]
Length = 349
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K+ ++ P+E W LW + +I M++S R+ IG LK +G
Sbjct: 128 YSVPYMWGTVGIIYNKTMVKE----PVESWNILWDKKYDKQIFMLDSQRDSIGVTLKKLG 183
Query: 137 ASYNSNN 143
S N+ N
Sbjct: 184 YSLNTKN 190
>gi|409418633|ref|ZP_11258610.1| polyamine ABC transporter substrate-binding protein, partial
[Pseudomonas sp. HYS]
Length = 267
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYK--KSKFRKHDLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +AAPY WG + Y K K R D AP+ W +++ E + ++M+++P E
Sbjct: 124 GNRFAAPYLWGTTGLGYDVDKVKARLGDAAPLNSWDLIFKEENIAKLADCGVAMLDAPNE 183
Query: 127 VIGSVLKYMGASYNSNN 143
+I L Y+G YNS N
Sbjct: 184 IIPIALHYLGLPYNSKN 200
>gi|116617327|ref|YP_817698.1| spermidine/putrescine-binding periplasmic protein [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|116096174|gb|ABJ61325.1| Spermidine/putrescine-binding periplasmic protein [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 359
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY WG + I Y + D I+ W DLW + +I +++S R+V+G L
Sbjct: 130 KGNKYSVPYFWGTLGIIYNDKYVKAKD---IQHWDDLWSSKFKNQIMLIDSARDVLGITL 186
Query: 133 KYMGASYNSNNI-DSQVAGGKVAV 155
G S N+ ++ D A GK+
Sbjct: 187 ITQGKSVNNKSVADLAAAQGKLTT 210
>gi|408357686|ref|YP_006846217.1| spermidine/putrescine ABC transporter substrate-binding protein
[Amphibacillus xylanus NBRC 15112]
gi|407728457|dbj|BAM48455.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Amphibacillus xylanus NBRC 15112]
Length = 357
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 42 SFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------TRGKIWAAPYRWGAMMIAYKKSKF 95
+ IEK + E + D + L H +R G ++ PY WG + I +
Sbjct: 91 EYMIEKMMEEDLLIPLDHEKLPNLIHIDERFMDLPFDEGNKYSVPYFWGTVGILFNPELL 150
Query: 96 RKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 145
W DLW P+L I +++ REVIG L +G S N N D
Sbjct: 151 PDKSFT---SWNDLWDPDLENGILLIDGAREVIGMGLNSLGYSLNDTNRD 197
>gi|227431343|ref|ZP_03913396.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227352936|gb|EEJ43109.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 359
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY WG + I Y + D I+ W DLW + +I +++S R+V+G L
Sbjct: 130 KGNKYSVPYFWGTLGIIYNDKYVKAKD---IQHWDDLWSSKFKNQIMLIDSARDVLGITL 186
Query: 133 KYMGASYNSNNI-DSQVAGGKVAV 155
G S N+ ++ D A GK+
Sbjct: 187 ITQGKSVNNKSVADLAAAQGKLTT 210
>gi|381335802|ref|YP_005173577.1| spermidine/putrescine-binding periplasmic protein [Leuconostoc
mesenteroides subsp. mesenteroides J18]
gi|356643768|gb|AET29611.1| spermidine/putrescine-binding periplasmic protein [Leuconostoc
mesenteroides subsp. mesenteroides J18]
Length = 359
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY WG + I Y + D I+ W DLW + +I +++S R+V+G L
Sbjct: 130 KGNKYSVPYFWGTLGIIYNDKYVKAKD---IQHWDDLWSSKFKNQIMLIDSARDVLGITL 186
Query: 133 KYMGASYNSNNI-DSQVAGGKVAV 155
G S N+ ++ D A GK+
Sbjct: 187 ITQGKSVNNKSVADLAAAQGKLTT 210
>gi|68163280|dbj|BAE02668.1| hypothetical peroplasmic polyamine-binding protein [Pseudomonas sp.
MCI3434]
Length = 364
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGRIS-----MVNSPRE 126
G +A PY WG + Y K R AP++ W +++PE ++S M+++P E
Sbjct: 121 GNRYAVPYLWGTTGVGYDVDKVRAILGPDAPVDSWDLIFKPENLSKLSQCGVAMLDAPGE 180
Query: 127 VIGSVLKYMGASYNSN 142
+I L Y+G YNSN
Sbjct: 181 IIPIALHYLGLPYNSN 196
>gi|339641621|ref|ZP_08663065.1| putative spermidine/putrescine ABC transporter protein
[Streptococcus sp. oral taxon 056 str. F0418]
gi|339454890|gb|EGP67505.1| putative spermidine/putrescine ABC transporter protein
[Streptococcus sp. oral taxon 056 str. F0418]
Length = 356
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + K AP E W DLW+PE I +++ REV+G L
Sbjct: 129 GNQYSVPYFWGTLGIVYNEKLISK---AP-EHWDDLWKPEYKNSIMLIDGAREVMGIGLN 184
Query: 134 YMGASYNSNN 143
+G N N
Sbjct: 185 SLGYGLNDKN 194
>gi|218249972|ref|YP_002375140.1| spermidine/putrescine ABC transporter substrate-binding protein
[Borrelia burgdorferi ZS7]
gi|218165160|gb|ACK75221.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia burgdorferi ZS7]
Length = 348
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG M I Y K+K DL + + L+ + I+M++SP++ IG LK
Sbjct: 117 GNLYSVPAYWGLMGILYNKTKI---DLNDMRGFDILFNKKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N ++ D G++ QN L+
Sbjct: 174 KLGYSINEHDTDKIKEAGELLKIQNPLLI 202
>gi|421502860|ref|ZP_15949812.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
gi|400346317|gb|EJO94675.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
Length = 364
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC----LSHKWKRTRGKIWAAPYRWGAMM 87
DLV + +L I+ + P+ + +W L K G + PY +G ++
Sbjct: 75 DLVIPSNQFLETQIKAGVFAPLDKSKLPNWKNLDPVLLGLLEKNDPGNQYGVPYMYGTVL 134
Query: 88 IAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 140
I Y K + D AP+ W +++PE + ++M++SP E+I L Y+G N
Sbjct: 135 IGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLDSPTEIIPIALHYLGLDPN 194
Query: 141 SNN 143
S+N
Sbjct: 195 SSN 197
>gi|146305165|ref|YP_001185630.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
gi|145573366|gb|ABP82898.1| extracellular solute-binding protein, family 1 [Pseudomonas
mendocina ymp]
Length = 364
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC----LSHKWKRTRGKIWAAPYRWGAMM 87
DLV + +L I+ + P+ + +W L K G + PY +G ++
Sbjct: 75 DLVIPSNQFLETQIKAGVFAPLDKSKLPNWKNLDPVLLGLLEKNDPGNQYGVPYMYGTVL 134
Query: 88 IAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 140
I Y K + D AP+ W +++PE + ++M++SP E+I L Y+G N
Sbjct: 135 IGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLDSPTEIIPIALHYLGLDPN 194
Query: 141 SNN 143
S+N
Sbjct: 195 SSN 197
>gi|228477141|ref|ZP_04061779.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
salivarius SK126]
gi|340399386|ref|YP_004728411.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus salivarius CCHSS3]
gi|418018366|ref|ZP_12657922.1| spermidine/putrescine-binding protein PotD [Streptococcus
salivarius M18]
gi|228251160|gb|EEK10331.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
salivarius SK126]
gi|338743379|emb|CCB93887.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus salivarius CCHSS3]
gi|345527215|gb|EGX30526.1| spermidine/putrescine-binding protein PotD [Streptococcus
salivarius M18]
Length = 355
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K AP + W DLW P+ +I +V+ REV+G L +G
Sbjct: 131 YSIPYFWGTVGIVYNTKLVKK---AP-QHWDDLWSPDYKNQIMLVDGAREVLGFSLNSLG 186
Query: 137 ASYNSNNI 144
S N+ N+
Sbjct: 187 YSLNTKNM 194
>gi|225868489|ref|YP_002744437.1| spermidine/putrescine extracellular binding protein [Streptococcus
equi subsp. zooepidemicus]
gi|225701765|emb|CAW99154.1| spermidine/putrescine extracellular binding protein [Streptococcus
equi subsp. zooepidemicus]
Length = 357
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K P+ W+DLWRPE I +V+ RE++G L G
Sbjct: 133 YSIPYFWGTVGIVYNDQLVDK---TPMH-WEDLWRPEYQNSIMLVDGAREILGVGLTTFG 188
Query: 137 ASYNSNNIDSQVAGGK 152
S NS ++ A K
Sbjct: 189 YSVNSKHLKQLEAAEK 204
>gi|358464530|ref|ZP_09174494.1| periplasmic spermidine/putrescine-binding protein PotD
[Streptococcus sp. oral taxon 058 str. F0407]
gi|357066930|gb|EHI77063.1| periplasmic spermidine/putrescine-binding protein PotD
[Streptococcus sp. oral taxon 058 str. F0407]
Length = 356
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYRDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNS 141
+G S NS
Sbjct: 185 SLGYSLNS 192
>gi|387784640|ref|YP_006070723.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus salivarius JIM8777]
gi|338745522|emb|CCB95888.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus salivarius JIM8777]
Length = 355
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K AP + W DLW P+ +I +V+ REV+G L +G
Sbjct: 131 YSIPYFWGTVGIVYNSKLVKK---AP-QHWDDLWSPDYKNQIMLVDGAREVLGFSLNSLG 186
Query: 137 ASYNSNNI 144
S N+ N+
Sbjct: 187 YSLNTKNM 194
>gi|307704562|ref|ZP_07641467.1| bacterial extracellular solute-binding family protein
[Streptococcus mitis SK597]
gi|307621859|gb|EFO00891.1| bacterial extracellular solute-binding family protein
[Streptococcus mitis SK597]
Length = 356
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|401684890|ref|ZP_10816764.1| ABC transporter, solute-binding protein [Streptococcus sp. BS35b]
gi|400184403|gb|EJO18647.1| ABC transporter, solute-binding protein [Streptococcus sp. BS35b]
Length = 356
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP+ W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAPVH-WDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|383939058|ref|ZP_09992247.1| ABC transporter, solute-binding protein [Streptococcus
pseudopneumoniae SK674]
gi|383714040|gb|EID70057.1| ABC transporter, solute-binding protein [Streptococcus
pseudopneumoniae SK674]
Length = 356
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|259502359|ref|ZP_05745261.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus antri DSM
16041]
gi|259169739|gb|EEW54234.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus antri DSM
16041]
Length = 357
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY WG + I Y K R D ++ W LW P L + +++S R+V L
Sbjct: 128 RGNRYSVPYFWGTLGIIYNDQKVRAQD---VQHWSQLWNPRLRNNLMLIDSARDVFAMAL 184
Query: 133 KYMGASYNSNN 143
G S N+ +
Sbjct: 185 ISQGQSVNTTS 195
>gi|407364585|ref|ZP_11111117.1| spermidine/putrescine transport system substrate-binding protein
[Pseudomonas mandelii JR-1]
Length = 365
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 23/160 (14%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIE-------PIAGGEDQDWFK 63
F++L K+ + Y DLV LS AI+ I+ P G +++ +
Sbjct: 59 FDSLETAETKLLTGRSGY---DLVLTAGQHLSRAIQSGAIQTLNLQRLPHFAGVGEEFRQ 115
Query: 64 CLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR----- 117
H G +A Y WG + Y++ ++ AP + W L+ P + +
Sbjct: 116 ---HMAAFDPGNRYAGIYAWGTTGVGYQEEAIKQRLPDAPRDSWAMLFDPAVVSKFADCG 172
Query: 118 ISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
+S++N P EV +V+KYMG N N+D K+A QQ
Sbjct: 173 VSLLNDPNEVFAAVMKYMGLDINRQNLDDL----KLAEQQ 208
>gi|406576611|ref|ZP_11052238.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
GMD6S]
gi|406588619|ref|ZP_11063198.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
GMD1S]
gi|419816097|ref|ZP_14340471.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
GMD2S]
gi|404461158|gb|EKA07135.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
GMD6S]
gi|404463620|gb|EKA09224.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
GMD2S]
gi|404467401|gb|EKA12524.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
GMD1S]
Length = 356
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKDSIMLFDGAREVLGFGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|417885902|ref|ZP_12530051.1| putative spermidine/putrescine ABC transporter [Lactobacillus oris
F0423]
gi|341594106|gb|EGS36909.1| putative spermidine/putrescine ABC transporter [Lactobacillus oris
F0423]
Length = 356
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY WG + I Y K R D ++ W LW P L + +++S R+V L
Sbjct: 127 RGNRYSVPYFWGTLGIIYNDQKVRAQD---VQHWSQLWNPRLRNNLMLIDSARDVFAMAL 183
Query: 133 KYMGASYNSNN 143
G S N+ +
Sbjct: 184 ISQGQSVNTTS 194
>gi|422683532|ref|ZP_16741791.1| ABC transporter periplasmic polyamine-binding protein [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331012865|gb|EGH92921.1| ABC transporter periplasmic polyamine-binding protein [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 372
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++ + +KV A Y D+V L I +++P+ + +W S
Sbjct: 65 FDSAEIMQSKVMAGRTGY---DVVVAPSNVLPSLITAGVLQPLDRSQLGNWSHLDSEILA 121
Query: 71 RTR----GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----IS 119
+ G +A PY WG I Y K + D AP++ W +++ E + ++
Sbjct: 122 KVSINDPGNRYAVPYLWGTTGIGYDVDKIKSALGDDAPVDSWDLVFKEENISKLQQCGVA 181
Query: 120 MVNSPREVIGSVLKYMGASYNSNNID 145
M++SP E+I L Y+G +NS N D
Sbjct: 182 MLDSPSEIISIALHYLGLPHNSKNPD 207
>gi|317500509|ref|ZP_07958732.1| spermidine/putrescine ABC transporter [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089392|ref|ZP_08338291.1| hypothetical protein HMPREF1025_01874 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336438792|ref|ZP_08618415.1| hypothetical protein HMPREF0990_00809 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316898098|gb|EFV20146.1| spermidine/putrescine ABC transporter [Lachnospiraceae bacterium
8_1_57FAA]
gi|330404760|gb|EGG84298.1| hypothetical protein HMPREF1025_01874 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336017789|gb|EGN47545.1| hypothetical protein HMPREF0990_00809 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 628
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K + P++ W LW + I M +S R+ LK +G
Sbjct: 405 YSVPYLWGTVGILYNKKMVDE----PVDSWNILWDEKYTDSILMQDSVRDAFAVALKSLG 460
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D A K+ ++Q
Sbjct: 461 YSLNSTDLDELEAAKKLLIKQ 481
>gi|399887710|ref|ZP_10773587.1| spermidine/putrescine ABC transporter periplasmic protein
[Clostridium arbusti SL206]
Length = 360
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY G+ MI Y K +K I+ KDLW P L G +++ PR VIG L +G
Sbjct: 139 YSIPYSLGSQMIVYNPDKVKKD----IKGIKDLWDPSLKGSEVLLDDPRSVIGMALTKLG 194
Query: 137 ASYNSNN 143
S N +
Sbjct: 195 YSINETD 201
>gi|153816189|ref|ZP_01968857.1| hypothetical protein RUMTOR_02437 [Ruminococcus torques ATCC 27756]
gi|145846524|gb|EDK23442.1| ABC transporter, solute-binding protein [Ruminococcus torques ATCC
27756]
Length = 603
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K + P++ W LW + I M +S R+ LK +G
Sbjct: 380 YSVPYLWGTVGILYNKKMVDE----PVDSWNILWDEKYTDSILMQDSVRDAFAVALKSLG 435
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D A K+ ++Q
Sbjct: 436 YSLNSTDLDELEAAKKLLIKQ 456
>gi|312869661|ref|ZP_07729809.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus oris PB013-T2-3]
gi|311094795|gb|EFQ53091.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus oris PB013-T2-3]
Length = 356
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY WG + I Y K R D ++ W LW P L + +++S R+V L
Sbjct: 127 RGNRYSVPYFWGTLGIIYNDQKVRAQD---VQHWSQLWNPRLRNNLMLIDSARDVFAMAL 183
Query: 133 KYMGASYNSNN 143
G S N+ +
Sbjct: 184 ISQGQSVNTTS 194
>gi|221632545|ref|YP_002521766.1| spermidine/putrescine-binding periplasmic protein [Thermomicrobium
roseum DSM 5159]
gi|221155647|gb|ACM04774.1| spermidine/putrescine-binding periplasmic protein precursor
[Thermomicrobium roseum DSM 5159]
Length = 401
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSH------KWKRTRGKIWAAPYRWGA 85
D++ D +S I L+EP+ D K +++ K ++ PY WG
Sbjct: 128 DVIVPSDYMVSIMINLGLLEPL----DYSVIKTIANIDPENLKPYYDPDNTYSVPYMWGT 183
Query: 86 MMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
+Y S DLA WK+++ RPE+ G++ M++ REVIG+ L Y+G N +
Sbjct: 184 SGYSYDTSVL-GEDLA---SWKEVFEPRPEVRGKVVMLDDQREVIGAALMYLGYEINETS 239
Query: 144 IDSQVAGGKVAVQQNLALL 162
D+ ++ + Q +L
Sbjct: 240 DDALAKAKQLLLTQKPYVL 258
>gi|269104186|ref|ZP_06156882.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Photobacterium damselae subsp. damselae CIP
102761]
gi|268160826|gb|EEZ39323.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Photobacterium damselae subsp. damselae CIP
102761]
Length = 343
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++APY WG I+Y PI WKDLW + A ++ +++ R+V G LK G
Sbjct: 123 YSAPYVWGVTGISYNSELVT----TPITGWKDLWNADFARQVMLLDDVRDVFGMALKAQG 178
Query: 137 ASYNSNN 143
S N+ N
Sbjct: 179 HSINTTN 185
>gi|390629907|ref|ZP_10257898.1| Spermidine/putrescine-binding periplasmic protein [Weissella
confusa LBAE C39-2]
gi|390484872|emb|CCF30246.1| Spermidine/putrescine-binding periplasmic protein [Weissella
confusa LBAE C39-2]
Length = 361
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY WG + I Y + + I+ W DLW P I +++S R+++G L
Sbjct: 132 RGNEYSVPYFWGTLGIVYNDKYVKPGE---IKTWNDLWNPRFKNSIMLIDSSRDIMGMTL 188
Query: 133 KYMGASYNSNNI 144
G S N+ +I
Sbjct: 189 ASSGNSVNTKSI 200
>gi|443477176|ref|ZP_21067041.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
gi|443017738|gb|ELS32116.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
Length = 382
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG +++ P G IAY + DW LW+ + RI++VN PREVIG L
Sbjct: 150 RGAVFSIPVSLGTTGIAYNVEAVKSIVGEEPTDWSYLWQHKNKLRITLVNDPREVIGMAL 209
Query: 133 KYMGASYNSNNIDSQV 148
+ SYNS +SQ+
Sbjct: 210 HTLSYSYNSKE-ESQI 224
>gi|331090840|ref|ZP_08339686.1| hypothetical protein HMPREF9477_00329 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330399699|gb|EGG79361.1| hypothetical protein HMPREF9477_00329 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 634
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K + PI+ W LW + I M +S R+ LKY+G
Sbjct: 411 YSVPYCWGTVGILYNKKMVDE----PIDSWSVLWDKKYKDNILMQDSVRDAFAVALKYLG 466
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D ++ ++Q
Sbjct: 467 YSLNSTDLDELQEAKELLIKQ 487
>gi|328958141|ref|YP_004375527.1| spermidine/putrescine ABC transporter substrate binding lipoprotein
[Carnobacterium sp. 17-4]
gi|328674465|gb|AEB30511.1| spermidine/putrescine ABC transporter, substrate binding
lipoprotein precursor [Carnobacterium sp. 17-4]
Length = 357
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF D I+ W DLW L ++ +++ RE+IG L G
Sbjct: 132 YSIPYFWGTLGIIYN-DKFVDED--AIQHWDDLWNSSLKNKVMLIDGAREIIGLALDSEG 188
Query: 137 ASYNSNNIDSQVAGG 151
S NS + D Q+A
Sbjct: 189 HSLNSKD-DEQLAAA 202
>gi|397688815|ref|YP_006526134.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
stutzeri DSM 10701]
gi|395810371|gb|AFN79776.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 10701]
Length = 365
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 20 KVKAKSASYMAADLVSVGDPWLSFAIEKRLIE-------PIAGGEDQDWFKCLSHKWKRT 72
K+ A S+ Y D+V +P+L+ I+ + + P G D+D K L
Sbjct: 67 KLLAGSSGY---DVVVPSNPFLAKQIKAGVFQKLDRSKLPNWGNLDKDLLKALE---PSD 120
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPR 125
G ++ PY WG + I Y K + D AP++ W +++PE + ++ ++SP
Sbjct: 121 PGNQYSVPYMWGTIGIGYNPEKVKAALGDNAPVDSWDLVFKPENIEKLKSCGVAFLDSPT 180
Query: 126 EVIGSVLKYMGASYNSNNID 145
E++ + L Y+G + +S D
Sbjct: 181 EMLPAALHYLGYASDSGKAD 200
>gi|406587182|ref|ZP_11062090.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
GMD1S]
gi|419815088|ref|ZP_14339776.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
GMD2S]
gi|419817453|ref|ZP_14341614.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
GMD4S]
gi|404465959|gb|EKA11327.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
GMD4S]
gi|404469750|gb|EKA14475.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
GMD2S]
gi|404473348|gb|EKA17691.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
GMD1S]
Length = 356
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|417915510|ref|ZP_12559119.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus mitis bv. 2 str. SK95]
gi|342833349|gb|EGU67630.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus mitis bv. 2 str. SK95]
Length = 356
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLNSLG 187
Query: 137 ASYNSNN 143
S NS +
Sbjct: 188 YSLNSKD 194
>gi|411118601|ref|ZP_11390982.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410712325|gb|EKQ69831.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 375
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWR--PELAGRISMVNSPREVIGSV 131
G + P WG + Y EDW+DLW+ P+L ++++++ REVIG+
Sbjct: 146 GNRHSVPISWGTTGLIYNTEALNPGP----EDWQDLWQMQPQLNRKMTLLSDVREVIGAS 201
Query: 132 LKYMGASYNSNN 143
LK +G SYNS N
Sbjct: 202 LKSLGYSYNSTN 213
>gi|326789509|ref|YP_004307330.1| extracellular solute-binding protein [Clostridium lentocellum DSM
5427]
gi|326540273|gb|ADZ82132.1| extracellular solute-binding protein family 1 [Clostridium
lentocellum DSM 5427]
Length = 350
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIE-------PIAGGEDQDWFK 63
F+++ + K+ Y D++ V D + IE+ L++ P D+++
Sbjct: 62 FDDMETMYLKIAGSDVKY---DVILVSDALMPRMIEEGLLQKLNKDNIPNIAQMDEEYLN 118
Query: 64 CLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNS 123
G ++ PY +G + I Y K++ + ++ W LW + ++ M ++
Sbjct: 119 L-----SMDPGNQYSVPYMFGTIGIIYDKNQVSEQ----VDSWDILWDEKYRDKVFMFDT 169
Query: 124 PREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
R+ IG LK +G S NS+N + A ++ ++Q
Sbjct: 170 YRDTIGVALKKLGYSMNSDNPEELEAAKELLLEQ 203
>gi|331266115|ref|YP_004325745.1| spermidine/putrescine ABC transporter substrate-binding protein
[Streptococcus oralis Uo5]
gi|326682787|emb|CBZ00404.1| ABC transporter substrate-binding protein-spermidine/putrescine
transport [Streptococcus oralis Uo5]
Length = 356
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|152974814|ref|YP_001374331.1| extracellular solute-binding protein [Bacillus cytotoxicus NVH
391-98]
gi|152023566|gb|ABS21336.1| extracellular solute-binding protein family 1 [Bacillus cytotoxicus
NVH 391-98]
Length = 350
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 12/145 (8%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTR---G 74
F K++A A Y DL+ D + E L+EP+ + + L +K
Sbjct: 69 FAKLQAGGAKY---DLIQPSDYMVKTMAEMDLLEPLNKKNIPN-VENLVSNFKTPAFDPE 124
Query: 75 KIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKY 134
++ Y WG IAY K ++ + W DLW + GR++++N REV+G LK
Sbjct: 125 NKYSLVYTWGVTGIAYNKKYVKETPTS----WNDLWNEKYKGRVTLLNDSREVLGMALKK 180
Query: 135 MGASYNSNNIDSQVAGGKVAVQQNL 159
G S NS D+Q+ +Q+ L
Sbjct: 181 NGFS-NSTKDDAQLKTAATDLQKLL 204
>gi|419778814|ref|ZP_14304696.1| ABC transporter, solute-binding protein [Streptococcus oralis SK10]
gi|383186900|gb|EIC79364.1| ABC transporter, solute-binding protein [Streptococcus oralis SK10]
Length = 356
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|346642954|ref|YP_259917.2| periplasmic putrescine-binding protein [Pseudomonas protegens Pf-5]
gi|341580100|gb|AAY92083.2| periplasmic putrescine-binding protein [Pseudomonas protegens Pf-5]
Length = 367
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 14/146 (9%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC----LS 66
F++ + +KV A Y D+V L I+ +++P+ G+ + L+
Sbjct: 60 FDSADIMQSKVMAGRTGY---DVVVATSNVLPSLIQAGVLQPLDSGQLSNLSHVDPAILA 116
Query: 67 HKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----IS 119
G +A PY WG I Y K R D AP+ W +++ E + ++
Sbjct: 117 QLAVNDPGNRYAVPYLWGTTGIGYDVDKVRAALGDNAPVNSWDLIFKEENISKLQSCGVA 176
Query: 120 MVNSPREVIGSVLKYMGASYNSNNID 145
M++SP E+I L Y+G NS N D
Sbjct: 177 MLDSPSEIISIALNYLGLPSNSKNPD 202
>gi|152988127|ref|YP_001346915.1| polyamine transport protein PotD [Pseudomonas aeruginosa PA7]
gi|150963285|gb|ABR85310.1| polyamine transport protein PotD [Pseudomonas aeruginosa PA7]
Length = 353
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 114 KGNRYSVPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELF 172
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 173 GAALKYLG--HSANDTDPQ 189
>gi|169824263|ref|YP_001691874.1| spermidine/putrescine ABC transporter ATP-binding protein
[Finegoldia magna ATCC 29328]
gi|167831068|dbj|BAG07984.1| spermidine/putrescine ABC transporter ATP-binding protein
[Finegoldia magna ATCC 29328]
Length = 341
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 24/154 (15%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGK-- 75
+ KVK ++Y D+V D I++ ++E I D+ K + K+ R K
Sbjct: 62 YMKVKEGGSNY---DVVVPSDYMAEKMIKQGMLEKI------DYSKIPNFKYIDQRFKNL 112
Query: 76 ------IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIG 129
+ PY WG + I Y K+K ++ ++ W LW + I M+NS R+ +G
Sbjct: 113 DYDPKNEYTVPYMWGTVGILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRDTLG 168
Query: 130 SVLKYMGASYNSNNIDSQVAGGKVAV--QQNLAL 161
LK +G S NS N ++++ K ++ Q++L L
Sbjct: 169 VALKRLGYSMNSRN-EAELEKAKQSLIKQKDLVL 201
>gi|386019062|ref|YP_005937086.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Pseudomonas
stutzeri DSM 4166]
gi|327479034|gb|AEA82344.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Pseudomonas stutzeri DSM 4166]
Length = 361
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 14/121 (11%)
Query: 47 KRLIEPIAGGEDQDWFKCLSH---KWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPI 103
++L+EPI +Q L H +W+ + G+ +A PY WG + IAY+ + + AP
Sbjct: 99 RKLLEPI----EQARLPALRHVARRWRDSCGR-YAVPYLWGTLGIAYRSDRIEQ---AP- 149
Query: 104 EDWKDLWRPELAG--RISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLAL 161
W DL +P I M+ +++ S L +G S N++++D A ++ Q+ A+
Sbjct: 150 RSWADLLKPARPDEPHIVMMEDHEDILASPLILLGHSINTSDLDLLKAAFELLRSQSEAV 209
Query: 162 L 162
L
Sbjct: 210 L 210
>gi|417923110|ref|ZP_12566582.1| ABC transporter, solute-binding protein [Streptococcus mitis SK569]
gi|342837233|gb|EGU71429.1| ABC transporter, solute-binding protein [Streptococcus mitis SK569]
Length = 356
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIIYNETMVEE---AP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|152979401|ref|YP_001345030.1| extracellular solute-binding protein [Actinobacillus succinogenes
130Z]
gi|150841124|gb|ABR75095.1| extracellular solute-binding protein family 1 [Actinobacillus
succinogenes 130Z]
Length = 363
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLS-FAIEKRLIE------PIAGGEDQDWFKCLSHKWK 70
+ KVK ++ D+++ + ++S A E L E P+ D DW
Sbjct: 78 YAKVKLQTKGDDGYDVIAPSNYFVSKMAREGMLTELDHSKLPVIAELDPDWLNK-----S 132
Query: 71 RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGS 130
G ++ P GA IA+ + ++ D W DLW+PE AG++ +++ REV
Sbjct: 133 YDEGNKYSLPQLLGAPGIAFNVNTYKGSDFT---SWGDLWKPEYAGKVQLLDDAREVFNI 189
Query: 131 VLKYMGASYNSNNID 145
L +G + N+ N D
Sbjct: 190 ALVKLGFNPNTTNPD 204
>gi|444386956|ref|ZP_21184982.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PCS125219]
gi|444389516|ref|ZP_21187431.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PCS70012]
gi|444392358|ref|ZP_21190091.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PCS81218]
gi|444400127|ref|ZP_21197546.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0007]
gi|444416724|ref|ZP_21212804.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0360]
gi|444420291|ref|ZP_21216090.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0427]
gi|444254166|gb|ELU60612.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PCS125219]
gi|444255979|gb|ELU62317.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PCS70012]
gi|444263532|gb|ELU69694.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PCS81218]
gi|444267155|gb|ELU73069.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0007]
gi|444285115|gb|ELU90205.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0427]
gi|444285314|gb|ELU90392.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0360]
Length = 356
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+P+ I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPKYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S NS ++
Sbjct: 185 SLGYSLNSKDL 195
>gi|385260561|ref|ZP_10038705.1| ABC transporter, solute-binding protein [Streptococcus sp. SK140]
gi|385191111|gb|EIF38535.1| ABC transporter, solute-binding protein [Streptococcus sp. SK140]
Length = 356
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLNSLG 187
Query: 137 ASYNSNN 143
S NS +
Sbjct: 188 YSLNSKD 194
>gi|299821487|ref|ZP_07053375.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Listeria grayi DSM 20601]
gi|299817152|gb|EFI84388.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Listeria grayi DSM 20601]
Length = 357
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + + Y K F D + W LW +LA +I +++ REV+G L MG
Sbjct: 132 YSMPYFWGTLGVIYNKKMFPDKDFS---HWDTLWDKDLANQILLIDGAREVMGLGLNSMG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 KSVNDTN 195
>gi|116334427|ref|YP_795954.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
brevis ATCC 367]
gi|116099774|gb|ABJ64923.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
brevis ATCC 367]
Length = 356
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY WG + I Y + + ++ W+DLW P +I +++S R+++G L
Sbjct: 128 RDNRYSIPYFWGTLGIVYNDKYVKASE---VQHWQDLWSPRWKKQIMLIDSARDIMGMAL 184
Query: 133 KYMGASYNSNNIDSQVAGGK 152
+G S N+ N + +A K
Sbjct: 185 ITLGKSMNTTNPQTLLAAQK 204
>gi|329115776|ref|ZP_08244493.1| putative spermidine/putrescine ABC transporter [Streptococcus
parauberis NCFD 2020]
gi|326906181|gb|EGE53095.1| putative spermidine/putrescine ABC transporter [Streptococcus
parauberis NCFD 2020]
Length = 357
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + P + W DLWRPE +I +V+ RE +G L G
Sbjct: 133 YSIPYFWGTVGIVYNDQIIKN----PPKHWIDLWRPEYKNQIMLVDGARETMGFGLNTFG 188
Query: 137 ASYNSNNI 144
S N N+
Sbjct: 189 YSLNEKNL 196
>gi|237800517|ref|ZP_04588978.1| ABC transporter periplasmic polyamine-binding protein [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|440746821|ref|ZP_20926096.1| periplasmic spermidine putrescine-binding protein [Pseudomonas
syringae BRIP39023]
gi|331023377|gb|EGI03434.1| ABC transporter periplasmic polyamine-binding protein [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|440370668|gb|ELQ07555.1| periplasmic spermidine putrescine-binding protein [Pseudomonas
syringae BRIP39023]
Length = 366
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 14/146 (9%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++ + +KV A Y D+V L I +++P+ + +W S
Sbjct: 59 FDSAEIMQSKVMAGRTGY---DVVVATSNVLPSLITAGVLQPLDRSQLGNWSHLDSEILA 115
Query: 71 RTR----GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----IS 119
+ G +A PY WG I Y K + D AP+ W +++ E + ++
Sbjct: 116 KVSINDPGNRYAVPYLWGTTGIGYDVDKIKSALGDDAPVNSWDLVFKEENISKLQQCGVA 175
Query: 120 MVNSPREVIGSVLKYMGASYNSNNID 145
M++SP E+I L Y+G +NS N D
Sbjct: 176 MLDSPSEIISIALHYLGLPHNSKNPD 201
>gi|457095505|gb|EMG25989.1| ABC transporter, periplasmic spermidine putrescine-binding protein
[Streptococcus parauberis KRS-02083]
Length = 357
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + P + W DLWRPE +I +V+ RE +G L G
Sbjct: 133 YSIPYFWGTVGIVYNDQIIKN----PPKHWIDLWRPEYKNQIMLVDGARETMGFGLNTFG 188
Query: 137 ASYNSNNI 144
S N N+
Sbjct: 189 YSLNEKNL 196
>gi|456370862|gb|EMF49758.1| ABC transporter, periplasmic spermidine putrescine-binding protein
[Streptococcus parauberis KRS-02109]
Length = 357
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + P + W DLWRPE +I +V+ RE +G L G
Sbjct: 133 YSIPYFWGTVGIVYNDQIIKN----PPKHWIDLWRPEYKNQIMLVDGARETMGFGLNTFG 188
Query: 137 ASYNSNNI 144
S N N+
Sbjct: 189 YSLNEKNL 196
>gi|224531826|ref|ZP_03672458.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia valaisiana VS116]
gi|224511291|gb|EEF81697.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding periplasmic protein
[Borrelia valaisiana VS116]
Length = 348
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNLYSVPAYWGLMGILYNKNKI---DLNDMQGFDILFNEKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+ S N ++ID G++ QN L+
Sbjct: 174 KLEYSINEHDIDKIKEAGELLKIQNPLLI 202
>gi|219849227|ref|YP_002463660.1| family 1 extracellular solute-binding protein [Chloroflexus
aggregans DSM 9485]
gi|219543486|gb|ACL25224.1| extracellular solute-binding protein family 1 [Chloroflexus
aggregans DSM 9485]
Length = 382
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 21/134 (15%)
Query: 20 KVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSH------KWKRTR 73
K++A ++ Y DLV D +A++ + E +A D+ + H +
Sbjct: 93 KIRAGNSGY---DLVVPSD----YAVQIMIAEGMALPIDKSLVPNIVHLDPNLLDQYFDK 145
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE----LAGRISMVNSPREVIG 129
G +++ PY +G IAY F I+ W + P+ AG+ SM++ RE G
Sbjct: 146 GNVYSLPYMYGLTGIAYNTKFFPNG----IDSWAAILEPDQVAAFAGKFSMLDDARETPG 201
Query: 130 SVLKYMGASYNSNN 143
+VL+Y+G S NS +
Sbjct: 202 AVLRYIGQSLNSTD 215
>gi|392982666|ref|YP_006481253.1| polyamine transporter PotD [Pseudomonas aeruginosa DK2]
gi|419754797|ref|ZP_14281155.1| polyamine transporter PotD [Pseudomonas aeruginosa PADK2_CF510]
gi|384398615|gb|EIE45020.1| polyamine transporter PotD [Pseudomonas aeruginosa PADK2_CF510]
gi|392318171|gb|AFM63551.1| polyamine transporter PotD [Pseudomonas aeruginosa DK2]
Length = 353
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 114 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 172
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 173 GAALKYLG--HSANDTDPQ 189
>gi|428318683|ref|YP_007116565.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
gi|428242363|gb|AFZ08149.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
Length = 376
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSV 131
G ++ P WG + Y + ++ EDW LW + ELA R+++ N REV+G+
Sbjct: 150 GNRYSVPVSWGTTGLIYNSEQLKEEP----EDWDYLWQHKQELAKRMTLANDVREVMGAA 205
Query: 132 LKYMGASYNSNN 143
L+ +G S NS N
Sbjct: 206 LRMLGYSLNSTN 217
>gi|182684344|ref|YP_001836091.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus pneumoniae CGSP14]
gi|182629678|gb|ACB90626.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CGSP14]
Length = 356
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ A E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMVE----AAPEHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|416854709|ref|ZP_11911066.1| polyamine transport protein PotD [Pseudomonas aeruginosa 138244]
gi|421518153|ref|ZP_15964827.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO579]
gi|451987812|ref|ZP_21935964.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Pseudomonas aeruginosa 18A]
gi|334843692|gb|EGM22277.1| polyamine transport protein PotD [Pseudomonas aeruginosa 138244]
gi|404347635|gb|EJZ73984.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO579]
gi|451754571|emb|CCQ88487.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Pseudomonas aeruginosa 18A]
gi|453047383|gb|EME95097.1| polyamine transporter PotD [Pseudomonas aeruginosa PA21_ST175]
Length = 353
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 114 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 172
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 173 GAALKYLG--HSANDTDPQ 189
>gi|158321557|ref|YP_001514064.1| extracellular solute-binding protein [Alkaliphilus oremlandii
OhILAs]
gi|158141756|gb|ABW20068.1| extracellular solute-binding protein family 1 [Alkaliphilus
oremlandii OhILAs]
Length = 348
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + + Y + ++ P++ W+ LW + AG+I M++S R+ IG LK +G
Sbjct: 127 YSVPYMWGTVGLLYDTTVVKE----PVDSWELLWDEKYAGQILMMDSQRDSIGITLKKLG 182
Query: 137 ASYNSNN 143
S NS +
Sbjct: 183 FSVNSRD 189
>gi|420138192|ref|ZP_14646132.1| polyamine transport protein PotD [Pseudomonas aeruginosa CIG1]
gi|403249045|gb|EJY62561.1| polyamine transport protein PotD [Pseudomonas aeruginosa CIG1]
Length = 354
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 115 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 173
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 174 GAALKYLG--HSANDTDPQ 190
>gi|424939578|ref|ZP_18355341.1| polyamine transport protein PotD [Pseudomonas aeruginosa NCMG1179]
gi|346056024|dbj|GAA15907.1| polyamine transport protein PotD [Pseudomonas aeruginosa NCMG1179]
Length = 353
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 114 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 172
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 173 GAALKYLG--HSANDTDPQ 189
>gi|313108968|ref|ZP_07794943.1| polyamine transport protein PotD [Pseudomonas aeruginosa 39016]
gi|386067645|ref|YP_005982949.1| polyamine ABC transporter [Pseudomonas aeruginosa NCGM2.S1]
gi|310881445|gb|EFQ40039.1| polyamine transport protein PotD [Pseudomonas aeruginosa 39016]
gi|348036204|dbj|BAK91564.1| polyamine ABC transporter [Pseudomonas aeruginosa NCGM2.S1]
Length = 353
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 114 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 172
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 173 GAALKYLG--HSANDTDPQ 189
>gi|309800693|ref|ZP_07694833.1| ABC transporter, substrate-binding protein [Streptococcus infantis
SK1302]
gi|308115678|gb|EFO53214.1| ABC transporter, substrate-binding protein [Streptococcus infantis
SK1302]
Length = 339
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L +G
Sbjct: 115 YSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLNSLG 170
Query: 137 ASYNSNN 143
S NS +
Sbjct: 171 YSLNSKD 177
>gi|107103124|ref|ZP_01367042.1| hypothetical protein PaerPA_01004193 [Pseudomonas aeruginosa PACS2]
Length = 354
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 115 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 173
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 174 GAALKYLG--HSANDTDPQ 190
>gi|399518688|ref|ZP_10759642.1| extracellular solute-binding protein [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399113182|emb|CCH36200.1| extracellular solute-binding protein [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 364
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC----LSHKWKRTRGKIWAAPYRWGAMM 87
DLV + +L I+ + P+ + +W L K G + PY +G ++
Sbjct: 75 DLVIPSNQFLETQIKAGVFAPLDKSKLPNWKNLDPVLLGLLEKNDPGNQYGVPYMYGTVL 134
Query: 88 IAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 140
I Y K + D AP+ W +++PE + ++M++SP E+I L Y+G N
Sbjct: 135 IGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLDSPTEIIPIALHYLGLDPN 194
Query: 141 SNN 143
S N
Sbjct: 195 SAN 197
>gi|375007599|ref|YP_004981232.1| spermidine/putrescine-binding periplasmic protein [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359286448|gb|AEV18132.1| Spermidine/putrescine-binding periplasmic protein [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 357
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRG------KIWAAPYRWGA 85
D+ D +S IE+ L+ P+ D D L + R ++ PY WG
Sbjct: 85 DVAVPSDYAISKMIEENLLLPL----DHDKLPNLQYIEPRFLNLPFDPHNRYSVPYFWGT 140
Query: 86 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
+ I Y + I W DLW P L +I +V+ REV+G L +G S N N
Sbjct: 141 VGIVYNREMLGGK---TITSWNDLWDPNLRNQILLVDGAREVMGMALNSLGYSLNDTN 195
>gi|386057442|ref|YP_005973964.1| polyamine transport protein PotD [Pseudomonas aeruginosa M18]
gi|347303748|gb|AEO73862.1| polyamine transport protein PotD [Pseudomonas aeruginosa M18]
Length = 353
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 114 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 172
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 173 GAALKYLG--HSANDTDPQ 189
>gi|218890165|ref|YP_002439029.1| polyamine transport protein PotD [Pseudomonas aeruginosa LESB58]
gi|218770388|emb|CAW26153.1| polyamine transport protein PotD [Pseudomonas aeruginosa LESB58]
Length = 354
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 115 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 173
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 174 GAALKYLG--HSANDTDPQ 190
>gi|220928335|ref|YP_002505244.1| family 1 extracellular solute-binding protein [Clostridium
cellulolyticum H10]
gi|219998663|gb|ACL75264.1| extracellular solute-binding protein family 1 [Clostridium
cellulolyticum H10]
Length = 350
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K+ ++ P++ W LW + +I M++S R+ IG LK +G
Sbjct: 129 YSVPYMWGTVGIIYNKTMVKE----PVDSWNILWDKKYDKQIFMLDSLRDSIGVTLKKLG 184
Query: 137 ASYNSNNIDS 146
S N+ N D
Sbjct: 185 YSLNTKNKDE 194
>gi|421158598|ref|ZP_15617845.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
25324]
gi|404549479|gb|EKA58338.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
25324]
Length = 354
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 115 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 173
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 174 GAALKYLG--HSANDTDPQ 190
>gi|210615095|ref|ZP_03290442.1| hypothetical protein CLONEX_02656 [Clostridium nexile DSM 1787]
gi|210150444|gb|EEA81453.1| hypothetical protein CLONEX_02656 [Clostridium nexile DSM 1787]
Length = 479
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 17/154 (11%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIE-------PIAGGEDQDWFK 63
F + + KV++ + +Y D+V D + IE L+ P Q++FK
Sbjct: 189 FETNEIMYPKVQSGAIAY---DVVCPSDYMIQRMIENDLLAELNFDNIPNVKNIGQEYFK 245
Query: 64 CLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNS 123
+ + K ++ PY WG + I Y K+ + PI+ W LW + I M +S
Sbjct: 246 --QSRQFDSENK-YSVPYCWGTVGILYNKTMVDE----PIDSWSVLWDEKYIDNILMQDS 298
Query: 124 PREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
R+ LKY G S NS ++D ++ ++Q
Sbjct: 299 VRDAFAVALKYKGHSLNSTDLDELEEAKELLIEQ 332
>gi|326693007|ref|ZP_08230012.1| spermidine/putrescine-binding periplasmic protein [Leuconostoc
argentinum KCTC 3773]
Length = 222
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 20 KVKAKSASYMAADLVSVGDPWLSFAIEKRLI-----EPIAGGEDQDWFKCLSHKWKRTRG 74
K+K ++Y DLV +P+++ + +L+ + I G E+ D L+ +
Sbjct: 77 KLKQGGSNY---DLVFPSEPFVTKLAQDQLLASLDPQKIHGLENLDPM-LLNQSFDPNNH 132
Query: 75 KIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKY 134
++ PY WG I Y F K++ ++ W LW ++ ++ ++++PRE IG L+
Sbjct: 133 --YSLPYFWGTTGIMYNTKVFSKYE---VDAWSKLWSSKMKDQVMLIDAPRESIGMGLQA 187
Query: 135 MGASYNSNN 143
+G S N +N
Sbjct: 188 LGYSENDHN 196
>gi|15598806|ref|NP_252300.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO1]
gi|254236526|ref|ZP_04929849.1| polyamine transport protein PotD [Pseudomonas aeruginosa C3719]
gi|254242308|ref|ZP_04935630.1| polyamine transport protein PotD [Pseudomonas aeruginosa 2192]
gi|418586155|ref|ZP_13150201.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P1]
gi|418589417|ref|ZP_13153339.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P2]
gi|421152581|ref|ZP_15612161.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
14886]
gi|421179226|ref|ZP_15636822.1| polyamine transport protein PotD [Pseudomonas aeruginosa E2]
gi|9949767|gb|AAG06998.1|AE004781_6 polyamine transport protein PotD [Pseudomonas aeruginosa PAO1]
gi|126168457|gb|EAZ53968.1| polyamine transport protein PotD [Pseudomonas aeruginosa C3719]
gi|126195686|gb|EAZ59749.1| polyamine transport protein PotD [Pseudomonas aeruginosa 2192]
gi|375043829|gb|EHS36445.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P1]
gi|375051651|gb|EHS44117.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P2]
gi|404525341|gb|EKA35617.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
14886]
gi|404547469|gb|EKA56467.1| polyamine transport protein PotD [Pseudomonas aeruginosa E2]
Length = 354
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 115 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 173
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 174 GAALKYLG--HSANDTDPQ 190
>gi|398954916|ref|ZP_10676187.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398151864|gb|EJM40400.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 365
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++L K+ + Y DLV LS AIE ++ + + F + +++
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIESGAVQTV-DKQQLPHFAGVGEEFR 114
Query: 71 RTR-----GKIWAAPYRWGAMMIAYKKSKFRKHDL-APIEDWKDLWRPELAGR-----IS 119
+ G +A Y WG + Y++ ++ AP + W L+ P + + +S
Sbjct: 115 QHMAVFDPGNRYAGIYAWGTTGVGYQEQAVKQRLADAPTDSWAMLFDPAVVSKFADCGVS 174
Query: 120 MVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
++N P EV +V+KYMG N ++D K+A QQ
Sbjct: 175 LLNDPNEVFAAVMKYMGLDINRQSLDDL----KLAEQQ 208
>gi|359395656|ref|ZP_09188708.1| Putrescine-binding periplasmic protein [Halomonas boliviensis LC1]
gi|357969921|gb|EHJ92368.1| Putrescine-binding periplasmic protein [Halomonas boliviensis LC1]
Length = 367
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 11/102 (10%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGRIS-------MVNSP 124
G ++ PY WG I Y + ++ D AP++ W L+ PE+ +S M++S
Sbjct: 122 GSEYSVPYMWGTNGIGYNVDRVKEILGDDAPVDSWALLFDPEITAALSEAGCGLSMLDSG 181
Query: 125 REVIGSVLKYMGASYNSNNIDSQVAGGKV--AVQQNLALLQN 164
E++ + Y+G S NID AGG++ V+ N+ +
Sbjct: 182 DEMLSPAMAYLGLDPLSENIDDLEAGGELIAGVRDNMTYFHS 223
>gi|296387886|ref|ZP_06877361.1| polyamine ABC transporter [Pseudomonas aeruginosa PAb1]
Length = 353
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 114 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 172
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 173 GAALKYLG--HSANDTDPQ 189
>gi|94987274|ref|YP_595207.1| spermidine/putrescine-binding periplasmic protein [Lawsonia
intracellularis PHE/MN1-00]
gi|94731523|emb|CAJ54886.1| Spermidine/putrescine-binding periplasmic protein [Lawsonia
intracellularis PHE/MN1-00]
Length = 350
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WGA+ + + K + D I + DL RPE GR+ + + R+ G LK G
Sbjct: 127 YSIPYMWGALGLLFNK---KVVDPTVITSFNDLNRPEFKGRVLLSDDMRDTFGVALKVRG 183
Query: 137 ASYNSNNIDSQVAG 150
S N+ N D AG
Sbjct: 184 YSVNTTNPDEIKAG 197
>gi|416874859|ref|ZP_11918408.1| polyamine ABC transporter [Pseudomonas aeruginosa 152504]
gi|334842601|gb|EGM21205.1| polyamine ABC transporter [Pseudomonas aeruginosa 152504]
Length = 354
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 115 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 173
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 174 GAALKYLG--HSANDTDPQ 190
>gi|307152289|ref|YP_003887673.1| extracellular solute-binding protein [Cyanothece sp. PCC 7822]
gi|306982517|gb|ADN14398.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC
7822]
Length = 356
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY+WG M I Y K K I+ W +++ +I++VN R ++G +L Y+G
Sbjct: 131 YSLPYQWGTMGIGYNIEKIGK-----IKTWSEIFNSHSKNKIALVNESRSMLGVILIYLG 185
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
+ N++N D ++Q
Sbjct: 186 YNPNTSNSDEIAQAKNFLIRQ 206
>gi|118443532|ref|YP_877312.1| extracellular solute-binding protein [Clostridium novyi NT]
gi|118133988|gb|ABK61032.1| Bacterial extracellular solute-binding protein, putative
[Clostridium novyi NT]
Length = 347
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + + I+ W LW P+ G+I MV+S R+ I LK +G
Sbjct: 126 YSVPYMWGTVGIIYNTKLIKDN----IDSWDALWNPKYKGQILMVDSQRDAIAVALKKLG 181
Query: 137 ASYNSNN 143
S N+ N
Sbjct: 182 YSMNTTN 188
>gi|116051607|ref|YP_789554.1| polyamine ABC transporter [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173152|ref|ZP_15630906.1| polyamine transport protein PotD [Pseudomonas aeruginosa CI27]
gi|115586828|gb|ABJ12843.1| polyamine ABC transporter protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404536453|gb|EKA46093.1| polyamine transport protein PotD [Pseudomonas aeruginosa CI27]
Length = 354
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 115 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 173
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 174 GAALKYLG--HSANDTDPQ 190
>gi|355640046|ref|ZP_09051536.1| hypothetical protein HMPREF1030_00622 [Pseudomonas sp. 2_1_26]
gi|354831566|gb|EHF15578.1| hypothetical protein HMPREF1030_00622 [Pseudomonas sp. 2_1_26]
Length = 353
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 114 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 172
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 173 GAALKYLG--HSANDTDPQ 189
>gi|365926131|ref|ZP_09448894.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
mali KCTC 3596 = DSM 20444]
gi|420267015|ref|ZP_14769433.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
mali KCTC 3596 = DSM 20444]
gi|394424140|gb|EJE97319.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
mali KCTC 3596 = DSM 20444]
Length = 356
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + ++ W DLW P I +++ REV+G L
Sbjct: 130 GNKYSLPYFWGTLGIIYNDKYVKASE---VKHWDDLWNPRFKNSIMLIDGAREVMGLTLN 186
Query: 134 YMGASYNSNNI-DSQVAGGKV 153
G S N N+ D Q A K+
Sbjct: 187 SQGKSVNDTNVKDLQAAYEKL 207
>gi|335030067|ref|ZP_08523566.1| putative spermidine/putrescine ABC transporter [Streptococcus
infantis SK1076]
gi|334267529|gb|EGL85989.1| putative spermidine/putrescine ABC transporter [Streptococcus
infantis SK1076]
Length = 356
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNETMVEE---AP-EHWNDLWKPEYKDSIMLFDGAREVLGLGLNSLG 187
Query: 137 ASYNSNN 143
S NS +
Sbjct: 188 YSLNSKD 194
>gi|421166158|ref|ZP_15624426.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
700888]
gi|404539135|gb|EKA48640.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
700888]
Length = 354
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 115 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVTVMDDPQELF 173
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 174 GAALKYLG--HSANDTDPQ 190
>gi|421277193|ref|ZP_15728013.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus mitis
SPAR10]
gi|395876474|gb|EJG87550.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus mitis
SPAR10]
Length = 356
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLNSLG 187
Query: 137 ASYNSNN 143
S NS +
Sbjct: 188 YSLNSKD 194
>gi|417935967|ref|ZP_12579284.1| ABC transporter, solute-binding protein [Streptococcus infantis X]
gi|343402876|gb|EGV15381.1| ABC transporter, solute-binding protein [Streptococcus infantis X]
Length = 356
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLNSLG 187
Query: 137 ASYNSNN 143
S NS +
Sbjct: 188 YSLNSKD 194
>gi|407473418|ref|YP_006787818.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium
acidurici 9a]
gi|407049926|gb|AFS77971.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium
acidurici 9a]
Length = 346
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K+ ++ P++ W LW + +I M+NS R+ +G LK +G
Sbjct: 125 YSVPYMWGTVGILYNKNMVKE----PVDSWDILWDEKYKEQILMLNSQRDSLGVALKKLG 180
Query: 137 ASYNSNNIDSQVAGGK 152
S NS N D ++ K
Sbjct: 181 YSMNSTN-DKELEEAK 195
>gi|333904886|ref|YP_004478757.1| spermidine/putrescine extracellular binding protein [Streptococcus
parauberis KCTC 11537]
gi|333120151|gb|AEF25085.1| spermidine/putrescine extracellular binding protein [Streptococcus
parauberis KCTC 11537]
Length = 284
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + P + W DLWRPE +I +V+ RE +G L G
Sbjct: 60 YSIPYFWGTVGIVYNDQIIKN----PPKHWIDLWRPEYKNQIMLVDGARETMGFGLNTFG 115
Query: 137 ASYNSNNI 144
S N N+
Sbjct: 116 YSLNEKNL 123
>gi|322387539|ref|ZP_08061148.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus infantis
ATCC 700779]
gi|419843100|ref|ZP_14366424.1| ABC transporter, solute-binding protein [Streptococcus infantis
ATCC 700779]
gi|321141406|gb|EFX36902.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus infantis
ATCC 700779]
gi|385703202|gb|EIG40328.1| ABC transporter, solute-binding protein [Streptococcus infantis
ATCC 700779]
Length = 356
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLNSLG 187
Query: 137 ASYNSNN 143
S NS +
Sbjct: 188 YSLNSKD 194
>gi|56419261|ref|YP_146579.1| spermidine/putrescine ABC transporter substrate-binding protein
[Geobacillus kaustophilus HTA426]
gi|56379103|dbj|BAD75011.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Geobacillus kaustophilus HTA426]
Length = 357
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + I W DLW P L +I +V+ REV+G L +G
Sbjct: 132 YSVPYFWGTVGIVYNREMLGG---KTITSWNDLWEPSLRNQILLVDGAREVMGMALNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|354806808|ref|ZP_09040288.1| bacterial extracellular solute-binding family protein
[Lactobacillus curvatus CRL 705]
gi|354514783|gb|EHE86750.1| bacterial extracellular solute-binding family protein
[Lactobacillus curvatus CRL 705]
Length = 355
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y +K P+ W DLW P+ G+I +V+S R+++ L
Sbjct: 129 GNKYSLPYFWGTLGIIYNDQLVKK----PLTHWSDLWSPDYRGQIMVVDSARDMMAVGLI 184
Query: 134 YMGASYNSNN 143
G S NS N
Sbjct: 185 ENGQSVNSTN 194
>gi|332705363|ref|ZP_08425441.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
gi|332355723|gb|EGJ35185.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
Length = 374
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 80 PYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGA 137
P WG + Y K K P EDW LW + +L+ R++++N REV+G+ LK +G
Sbjct: 154 PLSWGTTGLIYNSKKLSK---VP-EDWSYLWQDKDKLSRRMTLLNDVREVMGATLKMLGY 209
Query: 138 SYNSNN 143
SYNS N
Sbjct: 210 SYNSTN 215
>gi|442556116|ref|YP_007365941.1| spermidine/putrescine-binding periplasmic protein [Lawsonia
intracellularis N343]
gi|441493563|gb|AGC50257.1| spermidine/putrescine-binding periplasmic protein [Lawsonia
intracellularis N343]
Length = 345
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WGA+ + + K + D I + DL RPE GR+ + + R+ G LK G
Sbjct: 122 YSIPYMWGALGLLFNK---KVVDPTVITSFNDLNRPEFKGRVLLSDDMRDTFGVALKVRG 178
Query: 137 ASYNSNNIDSQVAG 150
S N+ N D AG
Sbjct: 179 YSVNTTNPDEIKAG 192
>gi|417937396|ref|ZP_12580696.1| ABC transporter, solute-binding protein [Streptococcus infantis
SK970]
gi|343391660|gb|EGV04233.1| ABC transporter, solute-binding protein [Streptococcus infantis
SK970]
Length = 356
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y ++ + AP E W DLW+PE I + + REV+G L +G
Sbjct: 132 YSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKDSIMLFDGAREVLGLGLNSLG 187
Query: 137 ASYNSNN 143
S NS +
Sbjct: 188 YSLNSKD 194
>gi|241894779|ref|ZP_04782075.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella
paramesenteroides ATCC 33313]
gi|241871991|gb|EER75742.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella
paramesenteroides ATCC 33313]
Length = 363
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + I+ W DLWRP+ I +++S R+V+G L
Sbjct: 135 GNKYSIPYFWGTLGIVYNDKYIKPGE---IKTWNDLWRPKYKKSIMLIDSSRDVMGMALA 191
Query: 134 YMGASYNSNNI 144
G S N+ +I
Sbjct: 192 SSGQSVNTKSI 202
>gi|339449923|ref|ZP_08653293.1| spermidine/putrescine-binding periplasmic protein [Leuconostoc
lactis KCTC 3528]
Length = 228
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 20 KVKAKSASYMAADLVSVGDPWLSFAIEKRLI-----EPIAGGEDQDWFKCLSHKWKRTRG 74
K+K ++Y DLV +P+++ + +L+ + I G E+ D L+ +
Sbjct: 83 KLKQGGSNY---DLVFPSEPFVTKLAQDQLLASLDPQKIHGLENLDPM-LLNQSFDPNNH 138
Query: 75 KIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKY 134
++ PY WG I Y F K++ ++ W LW ++ ++ ++++PRE IG L+
Sbjct: 139 --YSLPYFWGTTGIMYNTKVFSKYE---VDAWSKLWSSKMKDQVMLIDAPRESIGMGLQA 193
Query: 135 MGASYNSNN 143
+G S N +N
Sbjct: 194 LGYSENDHN 202
>gi|159897593|ref|YP_001543840.1| extracellular solute-binding protein [Herpetosiphon aurantiacus DSM
785]
gi|159890632|gb|ABX03712.1| extracellular solute-binding protein family 1 [Herpetosiphon
aurantiacus DSM 785]
Length = 373
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE----LAGRISMVNSPREVIGSVL 132
++ PY WG IAY K+ AP W L+ P GR+SM+N REVIG+ +
Sbjct: 148 FSVPYLWGTTGIAYDKTAVSP---APTS-WSILFDPAQLSAYKGRVSMLNDEREVIGAAM 203
Query: 133 KYMGASYNSNNIDSQVAGGKVAVQQ 157
++G NS++ A KV ++Q
Sbjct: 204 LFLGKDRNSSDAADLEAAKKVLIEQ 228
>gi|186686044|ref|YP_001869240.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
gi|186468496|gb|ACC84297.1| extracellular solute-binding protein, family 1 [Nostoc punctiforme
PCC 73102]
Length = 361
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKY 134
++ P+ WG + Y K + AP +DW LW+ + L R++++N REV+G+ L+
Sbjct: 138 YSIPFNWGTTGLLYNSEKIKD---AP-QDWDYLWQNQEKLNQRMTLLNDVREVMGATLRM 193
Query: 135 MGASYNSNN 143
+G SYNS N
Sbjct: 194 LGYSYNSKN 202
>gi|225420268|ref|ZP_03762571.1| hypothetical protein CLOSTASPAR_06611 [Clostridium asparagiforme
DSM 15981]
gi|225041085|gb|EEG51331.1| hypothetical protein CLOSTASPAR_06611 [Clostridium asparagiforme
DSM 15981]
Length = 374
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K + + + W DLW L+G I M NS R+ LK G
Sbjct: 141 YSVPYCWGTVGILYNKQRLEELGVPAPTKWADLWDERLSGEILMQNSVRDAFMVALKSKG 200
Query: 137 ASYNSNN 143
S NS N
Sbjct: 201 YSLNSTN 207
>gi|154252003|ref|YP_001412827.1| extracellular solute-binding protein [Parvibaculum lavamentivorans
DS-1]
gi|154155953|gb|ABS63170.1| extracellular solute-binding protein family 1 [Parvibaculum
lavamentivorans DS-1]
Length = 363
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKW 69
+F ++S F K++ + Y D++ + W+ I+ +++ + D + + +
Sbjct: 74 LFADVSELFAKMRGGNPGY---DVIVPSNDWVQRMIQAGMLQEL----DHSKIPNIKNIY 126
Query: 70 KR------TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW-RPELAGRISMVN 122
R G+ ++ PY WG + I Y+KSK A + W L+ E AGR ++++
Sbjct: 127 PRFMDEPFDPGRKYSLPYMWGTVGIGYRKSKVS----AVPDSWGALYDSDEYAGRSALLS 182
Query: 123 SPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
+IG LKY+G S NS + A ++ ++Q
Sbjct: 183 DCGTMIGCALKYLGYSLNSTDKAENEAAAELIIKQ 217
>gi|428302168|ref|YP_007140474.1| extracellular solute-binding protein [Calothrix sp. PCC 6303]
gi|428238712|gb|AFZ04502.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
6303]
Length = 365
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSVLKY 134
++ P+ WG Y K P EDW+ +W R L R++++N REV+G+ LK
Sbjct: 142 YSIPFTWGTTGFIYNSEKLT----TPPEDWEYIWQNRDILNKRMTLMNDSREVMGAALKM 197
Query: 135 MGASYNSNN 143
+G SYN+ +
Sbjct: 198 LGYSYNATD 206
>gi|343127940|ref|YP_004777871.1| extracellular solute-binding family protein [Borrelia bissettii
DN127]
gi|342222628|gb|AEL18806.1| bacterial extracellular solute-binding family protein [Borrelia
bissettii DN127]
Length = 348
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG M I Y K+K DL ++ + L+ + I+M++SP++ IG LK
Sbjct: 117 GNLYSVPAYWGLMGILYNKTKI---DLNDMQGFDILFNKKYKKEITMLDSPKDNIGVALK 173
Query: 134 YMGASYNSNNIDSQVAGGKVAVQQNLALL 162
+G S N + D G++ QN L+
Sbjct: 174 KLGYSINEYDADKIKEAGELLKIQNPLLI 202
>gi|330501041|ref|YP_004377910.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
gi|328915327|gb|AEB56158.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
Length = 364
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 70 KRTRGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVN 122
K G + PY +G ++I Y K + D AP+ W +++PE + ++M++
Sbjct: 117 KNDPGNQYGVPYMYGTVLIGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLD 176
Query: 123 SPREVIGSVLKYMGASYNSNN 143
SP E+I L Y+G NS N
Sbjct: 177 SPTEIIPIALHYLGLDPNSTN 197
>gi|399925056|ref|ZP_10782414.1| extracellular solute-binding protein [Peptoniphilus rhinitidis
1-13]
Length = 347
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K++ + ++ W LW + +I M NS R+ IG LK +G
Sbjct: 123 YSVPYFWGTVGIVYNKAEVKDK----VDSWDILWDKKYKDQIIMYNSQRDTIGVALKRLG 178
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS N K ++Q
Sbjct: 179 YSLNSTNEKELEEAKKSLIEQ 199
>gi|421858504|ref|ZP_16290771.1| spermidine/putrescine-binding periplasmic protein [Paenibacillus
popilliae ATCC 14706]
gi|410831949|dbj|GAC41208.1| spermidine/putrescine-binding periplasmic protein [Paenibacillus
popilliae ATCC 14706]
Length = 347
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 17/141 (12%)
Query: 9 GIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHK 68
+F N K+KA A+Y DL+ D ++ +++ L+E I ++D +
Sbjct: 58 AVFANNEELLAKIKAGGANY---DLIQPSDYMVASMMKQDLLETI----NKDNIPNFQYV 110
Query: 69 WKRTRGKIW------AAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVN 122
R + + + Y WG IAY K + + AP W DLW E G++ +++
Sbjct: 111 VSRFQNPEYDPDSEHSIIYTWGVTGIAYNKKQIAE---APTS-WADLWNDEYKGKVLLLD 166
Query: 123 SPREVIGSVLKYMGASYNSNN 143
RE+IG LK G S +++N
Sbjct: 167 DNREIIGVALKKAGKSNSTDN 187
>gi|307689123|ref|ZP_07631569.1| binding-protein-dependent transport systems inner membrane
component [Clostridium cellulovorans 743B]
Length = 549
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY W A +IAY SK + I + DLW+PEL + +++ R +IG LK +G
Sbjct: 328 YSLPYMWLAGIIAYDSSKVPE---GTITSYADLWKPELENSLCVLDDERAIIGITLKKLG 384
Query: 137 ASYNSNN 143
S N +
Sbjct: 385 YSLNDTS 391
>gi|166030942|ref|ZP_02233771.1| hypothetical protein DORFOR_00623 [Dorea formicigenerans ATCC
27755]
gi|166029209|gb|EDR47966.1| ABC transporter, solute-binding protein [Dorea formicigenerans ATCC
27755]
Length = 576
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ P+ WG + I Y K+ P++ W LW + I M +S R+ G LKY+G
Sbjct: 354 YSVPHLWGTVGILYNKTMVDD----PVDSWGILWNEKYKDSILMQDSVRDAFGITLKYLG 409
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D ++Q
Sbjct: 410 YSLNSTDLDELTEAKNKLIEQ 430
>gi|346306552|ref|ZP_08848707.1| hypothetical protein HMPREF9457_00416 [Dorea formicigenerans
4_6_53AFAA]
gi|345908255|gb|EGX77912.1| hypothetical protein HMPREF9457_00416 [Dorea formicigenerans
4_6_53AFAA]
Length = 632
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ P+ WG + I Y K+ P++ W LW + I M +S R+ G LKY+G
Sbjct: 410 YSVPHLWGTVGILYNKTMVDD----PVDSWGILWNEKYKDSILMQDSVRDAFGITLKYLG 465
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS ++D ++Q
Sbjct: 466 YSLNSTDLDELTEAKNKLIEQ 486
>gi|302875693|ref|YP_003844326.1| binding-protein-dependent transport system inner membrane protein
[Clostridium cellulovorans 743B]
gi|302578550|gb|ADL52562.1| binding-protein-dependent transport systems inner membrane
component [Clostridium cellulovorans 743B]
Length = 614
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY W A +IAY SK + I + DLW+PEL + +++ R +IG LK +G
Sbjct: 393 YSLPYMWLAGIIAYDSSKVPE---GTITSYADLWKPELENSLCVLDDERAIIGITLKKLG 449
Query: 137 ASYNSNN 143
S N +
Sbjct: 450 YSLNDTS 456
>gi|452877940|ref|ZP_21955185.1| polyamine transport protein PotD [Pseudomonas aeruginosa VRFPA01]
gi|452185377|gb|EME12395.1| polyamine transport protein PotD [Pseudomonas aeruginosa VRFPA01]
Length = 353
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVI 128
+G ++ PY + ++ Y K++ K + P DW ++ P ++ GR+++++ P+E+
Sbjct: 114 KGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLQKIRGRVTVMDDPQELF 172
Query: 129 GSVLKYMGASYNSNNIDSQ 147
G+ LKY+G +++N+ D Q
Sbjct: 173 GAALKYLG--HSANDTDPQ 189
>gi|242278796|ref|YP_002990925.1| extracellular solute-binding protein [Desulfovibrio salexigens DSM
2638]
gi|242121690|gb|ACS79386.1| extracellular solute-binding protein family 1 [Desulfovibrio
salexigens DSM 2638]
Length = 342
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTR---G 74
+ KVK Y DL+ ++S + L+ P+ + + F L+ K+
Sbjct: 62 YTKVKLAGEGY---DLIVPSSDYVSLMRRQGLLLPLDKKQLSN-FAYLAPKFTNQSFDPE 117
Query: 75 KIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKY 134
++ PY WG+ IA + + I DLW+PEL G++ + N PREV LK
Sbjct: 118 NTYSIPYMWGSTSIAVNTALLGNDTVNSI---ADLWKPELKGKLLLPNEPREVFALALKL 174
Query: 135 MGASYNSNN 143
+G N +
Sbjct: 175 LGYPLNETD 183
>gi|402310066|ref|ZP_10829035.1| ABC transporter, solute-binding protein [Eubacterium sp. AS15]
gi|400370129|gb|EJP23125.1| ABC transporter, solute-binding protein [Eubacterium sp. AS15]
Length = 363
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY W + + Y K K P++ W LW + +I M++S R+ IG LK +G
Sbjct: 141 YSVPYMWQTVGVVYNKKKITD----PVDSWNILWNEKYKRKIIMLDSSRDTIGITLKKLG 196
Query: 137 ASYNSNNIDSQVAGGK 152
S NS N D ++ K
Sbjct: 197 YSLNSKN-DKEINAAK 211
>gi|340355152|ref|ZP_08677844.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Sporosarcina newyorkensis
2681]
gi|339622592|gb|EGQ27107.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Sporosarcina newyorkensis
2681]
Length = 357
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + IAY S D E W+ LW L ++ +V+S REV+G L G
Sbjct: 132 YSIPYFWGTLGIAYNPSLL---DGQTFESWESLWDASLRQKVILVDSAREVLGVALNSFG 188
Query: 137 ASYNSNNI 144
S NS ++
Sbjct: 189 YSLNSTSL 196
>gi|398940925|ref|ZP_10669533.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398162169|gb|EJM50374.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 365
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPI--------AGGEDQDWF 62
F++L K+ + Y DLV LS AI+ I+ + AG D+ F
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIQSGAIQTLNPQQLPHFAGVGDE--F 113
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR---- 117
+ H G +A Y WG + Y++ ++ AP + W L+ P + +
Sbjct: 114 R--QHMAVFDPGNRYAGIYAWGTTGVGYQEEAIKQRLPDAPRDSWAMLFDPAVVSKFADC 171
Query: 118 -ISMVNSPREVIGSVLKYMGASYNSNNID 145
+S++N P EV +V+KYMG N N+D
Sbjct: 172 GVSLLNDPNEVFAAVMKYMGLDINRQNLD 200
>gi|149019339|ref|ZP_01834701.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP23-BS72]
gi|418103054|ref|ZP_12740128.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP070]
gi|419475715|ref|ZP_14015555.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA14688]
gi|419486871|ref|ZP_14026635.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44128]
gi|421209178|ref|ZP_15666192.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070005]
gi|421225224|ref|ZP_15681963.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070768]
gi|421240869|ref|ZP_15697414.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2080913]
gi|147931209|gb|EDK82188.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP23-BS72]
gi|353775687|gb|EHD56167.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP070]
gi|379561260|gb|EHZ26281.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA14688]
gi|379586580|gb|EHZ51431.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44128]
gi|395573887|gb|EJG34473.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070005]
gi|395589276|gb|EJG49595.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070768]
gi|395607247|gb|EJG67344.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2080913]
Length = 356
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+ S NS ++
Sbjct: 185 SLDYSLNSKDL 195
>gi|322516302|ref|ZP_08069231.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus vestibularis
ATCC 49124]
gi|322125234|gb|EFX96610.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus vestibularis
ATCC 49124]
Length = 356
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K AP + W DLW PE +I V+ REV+G L +G
Sbjct: 132 YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMFVDGAREVLGFSLNSLG 187
Query: 137 ASYNSNNI 144
S N+ ++
Sbjct: 188 HSLNTKSM 195
>gi|398904320|ref|ZP_10652192.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398175972|gb|EJM63708.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 365
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKC----LSHKWKRTRGKIWAAPYRWGAMM 87
D+V + +L+ I+ + +P+ + +W L + G A PY WG++
Sbjct: 76 DIVVPSNSFLAKQIKAGVYQPLDKSKLPNWKNLNPVLLKNASASDPGNSHAFPYMWGSIG 135
Query: 88 IAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 140
I Y +K ++ AP+ W L++PE A + IS ++SP E++ + L Y+G N
Sbjct: 136 IGYNPAKVKEVLGTDAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPAALHYLGYPVN 195
Query: 141 SNN 143
S +
Sbjct: 196 SQD 198
>gi|357236516|ref|ZP_09123859.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
criceti HS-6]
gi|356884498|gb|EHI74698.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
criceti HS-6]
Length = 357
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + + P + W DLW P I +++ REV+G L +G
Sbjct: 133 YSIPYFWGTVGIVYNDQQVKN----PPQHWTDLWNPRYKNAIMLIDGAREVMGLGLNALG 188
Query: 137 ASYNSNNID 145
S N+ N++
Sbjct: 189 YSLNTKNME 197
>gi|347526312|ref|YP_004833060.1| spermidine/putrescine-binding protein [Lactobacillus ruminis ATCC
27782]
gi|345285271|gb|AEN79124.1| Spermidine/putrescine-binding protein [Lactobacillus ruminis ATCC
27782]
Length = 357
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY WG + + Y F++ D ++ W LW + G+I V+ RE +G L
Sbjct: 128 RNNRYSVPYFWGTLGVVYNDKYFKESD---VDSWNKLWNKKFRGKIMFVDGAREFMGIGL 184
Query: 133 KYMGASYNSNN 143
+G S NS N
Sbjct: 185 ASLGYSLNSKN 195
>gi|399519022|ref|ZP_10759830.1| Putrescine transporter periplasmic protein [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112846|emb|CCH36388.1| Putrescine transporter periplasmic protein [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 365
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 14/137 (10%)
Query: 20 KVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWF---KCLSHKWKRTR-GK 75
K+ A S+ Y D+V +P+L+ I+ + + + + +W K L H + + G
Sbjct: 67 KLLAGSSGY---DIVVPSNPFLAKQIKAGVFQKLDKSKLPNWSNLDKDLLHALEPSDPGN 123
Query: 76 IWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVI 128
++ PY WG + I Y K + D AP++ W +++PE + +S ++SP E++
Sbjct: 124 QYSIPYMWGTIGIGYNVEKVKAVLGDNAPVDSWDLVFKPENIEKLKSCGVSFLDSPTEIL 183
Query: 129 GSVLKYMGASYNSNNID 145
+ L Y+G + +S D
Sbjct: 184 PAALHYLGYAPDSGKAD 200
>gi|254362547|ref|ZP_04978648.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Mannheimia haemolytica
PHL213]
gi|153094148|gb|EDN75044.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Mannheimia haemolytica
PHL213]
Length = 323
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 52 PIAGGEDQDWFKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWR 111
P+ +QDW +G ++ P GA IA+ + ++ W DLW+
Sbjct: 80 PVIKELNQDWLNK-----PYDQGNKYSLPQLLGAPGIAFNTADYKGETFT---SWGDLWK 131
Query: 112 PELAGRISMVNSPREVIGSVLKYMGASYNSNNIDS 146
PE AG++ +++ REV L +G + N+ N D
Sbjct: 132 PEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPDE 166
>gi|261493836|ref|ZP_05990350.1| Lpp38 [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|452745507|ref|ZP_21945341.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Mannheimia haemolytica serotype 6 str. H23]
gi|1142681|gb|AAA84748.1| Lpp38 [Mannheimia haemolytica]
gi|261310539|gb|EEY11728.1| Lpp38 [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|452086382|gb|EME02771.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Mannheimia haemolytica serotype 6 str. H23]
Length = 364
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 52 PIAGGEDQDWFKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWR 111
P+ +QDW +G ++ P GA IA+ + ++ W DLW+
Sbjct: 121 PVIKELNQDWLNK-----PYDQGNKYSLPQLLGAPGIAFNTADYKGETFT---SWGDLWK 172
Query: 112 PELAGRISMVNSPREVIGSVLKYMGASYNSNNIDS 146
PE AG++ +++ REV L +G + N+ N D
Sbjct: 173 PEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPDE 207
>gi|395764215|ref|ZP_10444884.1| extracellular solute-binding protein [Janthinobacterium lividum
PAMC 25724]
Length = 335
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKIWAAPYRWGAMMIAYK 91
DLV + D + A +K +IEP+ + + +K L K G +A Y ++ + Y+
Sbjct: 72 DLVLLSDSGMLEAAQKGVIEPMDYSKLSN-YKALYDVAKNPIGGNYAVGYTLYSVGLVYR 130
Query: 92 KSKFRKHDLAPIEDWKDLWRPELAGRISM 120
K +AP+ WKDLWRPEL GR++
Sbjct: 131 SDK-----IAPLTSWKDLWRPELKGRVAF 154
>gi|443472343|ref|ZP_21062372.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
gi|442902685|gb|ELS28201.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
Length = 366
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRT-----RGKIWAAPYRWGAM 86
D+V + +L+ I+ ++ +P+ + +W K L +T G +A PY WG++
Sbjct: 77 DIVVPSNNFLAKQIKAKVYQPLDKSKLPNW-KNLDPNLLKTVEVSDPGNQYAFPYMWGSI 135
Query: 87 MIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGAS 138
I Y K + D AP++ W L++PE + +S ++SP E++ L Y+G S
Sbjct: 136 GIGYNPDKVKAVLGDNAPVDSWDLLFKPENIEKLKSCGVSFLDSPTEILPIALHYLGYS 194
>gi|403383481|ref|ZP_10925538.1| spermidine/putrescine-binding periplasmic protein [Kurthia sp.
JC30]
Length = 358
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + + Y +K DL W LW P L G++ +V+S REV+G L M
Sbjct: 132 YSIPYFWGTVGVVYNPKMLQK-DL-DFSSWDQLWDPSLKGKVLLVDSAREVMGMSLNSMN 189
Query: 137 ASYNS 141
S NS
Sbjct: 190 LSLNS 194
>gi|352106290|ref|ZP_08961341.1| extracellular solute-binding protein [Halomonas sp. HAL1]
gi|350597938|gb|EHA14063.1| extracellular solute-binding protein [Halomonas sp. HAL1]
Length = 367
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGRIS-------MVNSP 124
G ++ PY WG I Y + ++ D AP++ W L+ PE+ G +S M++S
Sbjct: 122 GSEYSVPYMWGTNGIGYNVERVKEILGDDAPLDSWALLFDPEITGALSEAGCGLSMLDSA 181
Query: 125 REVIGSVLKYMGASYNSNNIDSQVAGGKV 153
E++ + Y+G S NID A G++
Sbjct: 182 DEMLSPAMAYLGLDPLSENIDDIEAAGEL 210
>gi|347732884|ref|ZP_08865955.1| potD [Desulfovibrio sp. A2]
gi|347518360|gb|EGY25534.1| potD [Desulfovibrio sp. A2]
Length = 345
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG+ + + + D A I W DL RPE AG++ + + R+ +G LK
Sbjct: 119 GNEYSVPYMWGSAGLMVNR---KVVDPASITSWNDLNRPEFAGKVILSDDQRDSMGVALK 175
Query: 134 YMGASYNSNN 143
+G S NS N
Sbjct: 176 ALGYSVNSTN 185
>gi|339624373|ref|ZP_08660162.1| spermidine/putrescine-binding periplasmic protein [Fructobacillus
fructosus KCTC 3544]
Length = 359
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY WG + I Y K + +L +W LW + ++ +V+S R+++G L
Sbjct: 130 RGNQYSIPYFWGTLGILYNKKEVNGSELT---NWSALWSAKYRNQVLLVDSARDILGMTL 186
Query: 133 KYMGASYNSNNI-DSQVAGGKVA 154
G S N N+ D A GK++
Sbjct: 187 ISQGKSVNDQNVADLAAAQGKLS 209
>gi|261495061|ref|ZP_05991528.1| Lpp38 [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261309303|gb|EEY10539.1| Lpp38 [Mannheimia haemolytica serotype A2 str. OVINE]
Length = 364
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 52 PIAGGEDQDWFKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWR 111
P+ +QDW +G ++ P GA IA+ + ++ W DLW+
Sbjct: 121 PVIKELNQDWLNK-----PYDQGNKYSLPQLLGAPGIAFNTADYKGETFT---SWGDLWK 172
Query: 112 PELAGRISMVNSPREVIGSVLKYMGASYNSNNIDS 146
PE AG++ +++ REV L +G + N+ N D
Sbjct: 173 PEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPDE 207
>gi|419766332|ref|ZP_14292538.1| ABC transporter, solute-binding protein [Streptococcus mitis SK579]
gi|383354202|gb|EID31776.1| ABC transporter, solute-binding protein [Streptococcus mitis SK579]
Length = 356
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D P E W DLW+PE I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEVP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
G S NS +
Sbjct: 185 SFGYSLNSKD 194
>gi|26990550|ref|NP_745975.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
putida KT2440]
gi|24985529|gb|AAN69439.1|AE016579_10 ABC transporter, periplasmic polyamine-binding protein, putative
[Pseudomonas putida KT2440]
Length = 369
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +AAPY WG I Y K + AP+ W +++ E + ++M+++P E
Sbjct: 126 GNSYAAPYLWGTTGIGYDADKVKSLLGPDAPVNSWDLIFKEENLAKLRQCGVAMLDAPGE 185
Query: 127 VIGSVLKYMGASYNSNNID 145
VI L Y+G YNS+N D
Sbjct: 186 VIPIALHYLGLPYNSHNPD 204
>gi|384439602|ref|YP_005654326.1| protein PotD2 [Thermus sp. CCB_US3_UF1]
gi|359290735|gb|AEV16252.1| PotD2 [Thermus sp. CCB_US3_UF1]
Length = 341
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTR---GKIWAAPYRWGAMMI 88
DL+ D ++ I+ RL++P+ + K L K+K G ++A Y+WG +
Sbjct: 71 DLIFPSDFYVPSLIQLRLVQPLDQARIPN-LKNLDEKFKSPPFDPGNRYSAAYQWGTTGL 129
Query: 89 AYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQV 148
Y+K + +A W L++ E +++S RE++G L+Y+G S N+ N
Sbjct: 130 IYRKDR-----VAAPPSWAVLFQ-EPKAPFVLMDSSREMLGIALRYLGFSVNTKNPKEVQ 183
Query: 149 AGGKVAVQ 156
G+V +Q
Sbjct: 184 QAGQVLLQ 191
>gi|335998012|ref|ZP_08563925.1| spermidine/putrescine-binding protein [Lactobacillus ruminis
SPM0211]
gi|335349894|gb|EGM51393.1| spermidine/putrescine-binding protein [Lactobacillus ruminis
SPM0211]
Length = 357
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY WG + + Y F++ D ++ W LW + G+I V+ RE +G L
Sbjct: 128 RNNRYSVPYFWGTLGVVYNDKYFKESD---VDSWNKLWNKKFRGKIMFVDGAREFMGIGL 184
Query: 133 KYMGASYNSNN 143
+G S NS N
Sbjct: 185 ASLGYSLNSKN 195
>gi|323340307|ref|ZP_08080567.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus ruminis ATCC
25644]
gi|417973333|ref|ZP_12614191.1| spermidine/putrescine-binding protein [Lactobacillus ruminis ATCC
25644]
gi|323092256|gb|EFZ34868.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus ruminis ATCC
25644]
gi|346330290|gb|EGX98551.1| spermidine/putrescine-binding protein [Lactobacillus ruminis ATCC
25644]
Length = 357
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY WG + + Y F++ D ++ W LW + G+I V+ RE +G L
Sbjct: 128 RNNRYSVPYFWGTLGVVYNDKYFKESD---VDSWNKLWNKKFRGKIMFVDGAREFMGIGL 184
Query: 133 KYMGASYNSNN 143
+G S NS N
Sbjct: 185 ASLGYSLNSKN 195
>gi|254506754|ref|ZP_05118894.1| spermidine/putrescine-binding periplasmic protein [Vibrio
parahaemolyticus 16]
gi|219550335|gb|EED27320.1| spermidine/putrescine-binding periplasmic protein [Vibrio
parahaemolyticus 16]
Length = 344
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG I+Y +S + PI W LW + A ++ +++ R+V G LK G
Sbjct: 122 YSLPYIWGVTGISYNESLVEE----PITKWAQLWDAKYAQQVMLIDDIRDVFGMALKLNG 177
Query: 137 ASYNSNNIDS--QVAGGKVAVQQNLAL 161
S NSNN Q VA++ N+ L
Sbjct: 178 HSINSNNEQEIKQAYESLVALKDNVLL 204
>gi|444378665|ref|ZP_21177859.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterovibrio sp. AK16]
gi|443677211|gb|ELT83898.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterovibrio sp. AK16]
Length = 347
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG I+Y D + + W DLW E AG+I +++ R+V G LK G
Sbjct: 126 YSLPYIWGVTAISYNGDIV---DGSNVTKWADLWNDEFAGQIMLLDDVRDVFGMALKAKG 182
Query: 137 ASYNSNNIDS 146
S N+ N D
Sbjct: 183 YSINTTNEDE 192
>gi|218887047|ref|YP_002436368.1| extracellular solute-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758001|gb|ACL08900.1| extracellular solute-binding protein family 1 [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 358
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG+ + + + D A I W DL RPE AG++ + + R+ +G LK
Sbjct: 132 GNEYSVPYMWGSAGLMVNR---KVVDPASITSWNDLNRPEFAGKVILSDDQRDSMGVALK 188
Query: 134 YMGASYNSNN 143
+G S NS N
Sbjct: 189 ALGYSVNSTN 198
>gi|209525279|ref|ZP_03273821.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|423065114|ref|ZP_17053904.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
gi|209494294|gb|EDZ94607.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|406713407|gb|EKD08577.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
Length = 363
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSVLKY 134
++ P WG + Y EDW+DLW + +L+ R++++N REV+G+ L+
Sbjct: 139 YSVPLSWGTTGLIYNSRLLPNSP----EDWEDLWTYQDQLSRRLTLLNDVREVMGASLRR 194
Query: 135 MGASYNSNN 143
+G SYNS N
Sbjct: 195 LGYSYNSTN 203
>gi|335357864|ref|ZP_08549734.1| spermidine/putrescine-binding protein [Lactobacillus animalis KCTC
3501]
Length = 357
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF + + + W DLW P+L +I ++ RE +G L MG
Sbjct: 132 YSVPYFWGTLGIIYN-DKF--YQASQFKTWNDLWDPQLKNKIMFIDGAREFMGIGLASMG 188
Query: 137 ASYNSNN 143
S NS N
Sbjct: 189 RSLNSKN 195
>gi|116627662|ref|YP_820281.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus LMD-9]
gi|386344482|ref|YP_006040646.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus JIM 8232]
gi|116100939|gb|ABJ66085.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus LMD-9]
gi|221047225|gb|ACL98064.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus JIM 8232]
gi|339277943|emb|CCC19691.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus JIM 8232]
Length = 356
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + P ++W+DLW E I +++ REV+G L+ +G
Sbjct: 132 YSIPYFWGTLGIVYNDTMVEN----PPQEWEDLWSDEYRDNIMLIDGVREVMGFGLQSLG 187
Query: 137 ASYNSNN 143
S NS N
Sbjct: 188 YSLNSKN 194
>gi|406658463|ref|ZP_11066603.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus iniae 9117]
gi|405578678|gb|EKB52792.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus iniae 9117]
Length = 357
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + + W+DLWRPE I +++ REV+G L G
Sbjct: 133 YSIPYFWGTVGIVYNDKMVE----STPKHWEDLWRPEYRNNIMLIDGAREVMGLGLNTFG 188
Query: 137 ASYNSNN 143
S NS N
Sbjct: 189 YSLNSKN 195
>gi|398959514|ref|ZP_10678178.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398145160|gb|EJM33956.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 366
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKF-RKHDLAPIEDWKDLWRPELAGR---- 117
K SH T+ + PY WG + + Y + ++ AP+ L++PELA +
Sbjct: 115 KLRSHYEHSTKATV---PYTWGTIGLTYNAEQIAQRAPDAPVNSLDMLFKPELAAKFADC 171
Query: 118 -ISMVNSPREVIGSVLKYMG 136
ISM++SP EV+ VL Y+G
Sbjct: 172 GISMIDSPDEVLAVVLNYLG 191
>gi|295425899|ref|ZP_06818577.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus amylolyticus
DSM 11664]
gi|295064397|gb|EFG55327.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus amylolyticus
DSM 11664]
Length = 357
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K I W DLWR + +I +++S R+ +G L MG
Sbjct: 132 YSIPYFWGTLGIVYNDKYIKK---GSITSWNDLWRKKYRRQILLIDSARDAMGLSLASMG 188
Query: 137 ASYNS-NNIDSQVAGGKV 153
S NS NN+ ++A K+
Sbjct: 189 YSMNSTNNLKLKLAQTKL 206
>gi|398887786|ref|ZP_10642412.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398191931|gb|EJM79105.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 366
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDL-APIEDWKDLWRPELAGR---- 117
K SH ++ + PY WG + + Y + K AP++ L++PELA +
Sbjct: 115 KLRSHYEHSSKATV---PYTWGTIGLTYNAEQIAKRAPDAPVDSLDMLFKPELAAKFADC 171
Query: 118 -ISMVNSPREVIGSVLKYMG 136
ISM++SP EV+ VL Y+G
Sbjct: 172 GISMIDSPDEVLAVVLNYLG 191
>gi|398943945|ref|ZP_10670946.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398158648|gb|EJM46988.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 367
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 80 PYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 133
PY WG + + Y + ++ AP+ L++PELAG+ ISM++SP EV+ VL
Sbjct: 130 PYTWGTIGLTYNAEQVKQRVPDAPVNSLDMLFKPELAGKFADCGISMIDSPDEVLAVVLN 189
Query: 134 YMG 136
Y+G
Sbjct: 190 YLG 192
>gi|329767050|ref|ZP_08258578.1| hypothetical protein HMPREF0428_00275 [Gemella haemolysans M341]
gi|328837775|gb|EGF87400.1| hypothetical protein HMPREF0428_00275 [Gemella haemolysans M341]
Length = 359
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + + Y K+K DL E W DLW LA I +++ RE++G L+ G
Sbjct: 131 FSIPYFWGTLGVLYNKTKV-PEDLK-FEKWNDLWDTRLANNILLIDGAREMMGIALQSEG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 NSVNDTN 195
>gi|376297850|ref|YP_005169080.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
ND132]
gi|323460412|gb|EGB16277.1| extracellular solute-binding protein family 1 [Desulfovibrio
desulfuricans ND132]
Length = 344
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG+ IA + + + + DLW+PE+ R+ + N PREV LK +G
Sbjct: 120 FSVPYMWGSTAIAVNTGTLGE---SAVTSYADLWKPEMKDRLLLPNDPREVFAIALKSLG 176
Query: 137 ASYNSNN 143
S N +
Sbjct: 177 YSLNDTD 183
>gi|51891606|ref|YP_074297.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Symbiobacterium thermophilum IAM 14863]
gi|51855295|dbj|BAD39453.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Symbiobacterium thermophilum IAM 14863]
Length = 353
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 59 QDWFKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRI 118
D F+ L H + ++ PY WG I K + W DLW PE GR+
Sbjct: 117 DDRFRGLDHDPELR----YSVPYVWGTTGIVINTEKISPDQMT---SWADLWNPEFQGRL 169
Query: 119 SMVNSPREVIGSVLKYMGASYNSNNIDS 146
+ + RE+IG L+ G N+ + D+
Sbjct: 170 VVPDDAREMIGIALRTEGYGVNTTDPDA 197
>gi|403667759|ref|ZP_10933059.1| spermidine/putrescine-binding periplasmic protein [Kurthia sp.
JC8E]
Length = 358
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + K W LW P L G++ +V+S REV+G L M
Sbjct: 132 YSIPYFWGTVGIVYNEKMLTKK--LDFTSWDQLWDPSLKGKVLLVDSAREVLGMSLNSMN 189
Query: 137 ASYNSNN 143
S N +
Sbjct: 190 MSLNETD 196
>gi|332297247|ref|YP_004439169.1| extracellular solute-binding protein [Treponema brennaborense DSM
12168]
gi|332180350|gb|AEE16038.1| extracellular solute-binding protein family 1 [Treponema
brennaborense DSM 12168]
Length = 345
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY GA +A K+K ++ + W R +L GR+ M++ REVIG L YMG
Sbjct: 125 YSVPYYMGAAGVAVNKTKVTSYE----KSWNIFARTDLKGRMCMMDDMREVIGDALAYMG 180
Query: 137 ASYNSNNIDSQVAGGKVAV 155
S NS + D+++ K V
Sbjct: 181 KSVNSLD-DAELNAAKELV 198
>gi|227825012|ref|ZP_03989844.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|352683976|ref|YP_004895960.1| hypothetical protein Acin_0580 [Acidaminococcus intestini RyC-MR95]
gi|226905511|gb|EEH91429.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|350278630|gb|AEQ21820.1| conserved hypothetical protein [Acidaminococcus intestini RyC-MR95]
Length = 353
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG I Y K + AP W+DLW P GR+ ++N REVIG LK G
Sbjct: 131 YSVVYTWGMTGIIYNKKYVK---TAPTS-WQDLWNPVYKGRVILLNDSREVIGMALKKHG 186
Query: 137 ASYNSNN 143
S N+ +
Sbjct: 187 FSNNATD 193
>gi|417090351|ref|ZP_11955885.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis R61]
gi|353533647|gb|EHC03296.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis R61]
Length = 356
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y ++ P ++W+DLW E I +++ REV+G L+ +G
Sbjct: 132 YSIPYFWGTLGIVYNETMVDN----PPQEWEDLWSEEYRDNIMLIDGVREVMGFGLQSLG 187
Query: 137 ASYNSNN 143
S NS N
Sbjct: 188 YSLNSKN 194
>gi|291562142|emb|CBL40958.1| Spermidine/putrescine-binding periplasmic protein
[butyrate-producing bacterium SS3/4]
Length = 646
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 37/82 (45%)
Query: 76 IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 135
+++ PY WG + I Y K + W DLW L G I M +S R+ LK +
Sbjct: 413 LYSVPYTWGTVGIIYNVQKLEDLGVPAPTKWSDLWDERLKGEILMQDSVRDAFMVALKEL 472
Query: 136 GASYNSNNIDSQVAGGKVAVQQ 157
G S N+ ++ K+ + Q
Sbjct: 473 GYSMNTTDVGELEEAKKLLLAQ 494
>gi|357635896|ref|ZP_09133771.1| ABC transporter, solute-binding protein [Streptococcus macacae NCTC
11558]
gi|357584350|gb|EHJ51553.1| ABC transporter, solute-binding protein [Streptococcus macacae NCTC
11558]
Length = 356
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query: 77 WAAPYRWGAMMIAYKK---SKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
++ PY WG + I Y K +K KH W DLW E A I +++ REV+G L
Sbjct: 132 YSIPYFWGTVGIVYNKKMLTKIPKH-------WNDLWSKEYANNIMLIDGAREVLGLGLN 184
Query: 134 YMGASYNSNNI 144
+G S N+ N+
Sbjct: 185 SLGYSLNTKNL 195
>gi|260589548|ref|ZP_05855461.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Blautia hansenii
DSM 20583]
gi|260540116|gb|EEX20685.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Blautia hansenii
DSM 20583]
Length = 622
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY G + I Y KS ++ P++ W LW P+ I M +S R+ LK +G
Sbjct: 399 YSVPYCVGTVGILYNKSMVKE----PVDSWDILWNPKYKDSILMQDSVRDAFAVALKRLG 454
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS +D A + ++Q
Sbjct: 455 HSINSTEVDQLAAAAEDLMEQ 475
>gi|366052509|ref|ZP_09450231.1| spermidine/putrescine ABC transporter binding protein
[Lactobacillus suebicus KCTC 3549]
Length = 357
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF K + +E WK LW P+ I + +S R+++ L +G
Sbjct: 132 YSVPYFWGTLGIVYN-DKFVKR--SQVEHWKQLWNPQFKNDIMLTDSARDMMAVALITLG 188
Query: 137 ASYNSNN 143
S NS N
Sbjct: 189 YSVNSTN 195
>gi|331082974|ref|ZP_08332094.1| hypothetical protein HMPREF0992_01018 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330399969|gb|EGG79627.1| hypothetical protein HMPREF0992_01018 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 622
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY G + I Y KS ++ P++ W LW P+ I M +S R+ LK +G
Sbjct: 399 YSVPYCVGTVGILYNKSMVKE----PVDSWDILWNPKYKDSILMQDSVRDAFAVALKRLG 454
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS +D A + ++Q
Sbjct: 455 HSINSTEVDQLAAAAEDLMEQ 475
>gi|409426758|ref|ZP_11261297.1| periplasmic spermidine putrescine-binding protein [Pseudomonas sp.
HYS]
Length = 367
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 22/150 (14%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++ + +KV A Y D+V L I+ +++P+ D++ LSH
Sbjct: 60 FDSADIMQSKVMAGRTGY---DVVVATSDVLPSLIQAGVLQPL----DREQLSNLSHIDP 112
Query: 71 RTRGKI--------WAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR--- 117
++ +A PY WG I Y K + D AP+ W +++ E +
Sbjct: 113 DLLAQVAVNDPGNRYAVPYLWGTTGIGYDVDKVKAALGDNAPVNSWDLIFKEENISKLQS 172
Query: 118 --ISMVNSPREVIGSVLKYMGASYNSNNID 145
++M++SP E+I L Y+G NS N D
Sbjct: 173 CGVAMLDSPSEIISIALHYLGLPSNSKNPD 202
>gi|421178662|ref|ZP_15636270.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa E2]
gi|404548130|gb|EKA57099.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa E2]
Length = 367
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 14/148 (9%)
Query: 7 IDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLS 66
I G F++ K+ A + Y D+V + L I+ +++ + + ++W
Sbjct: 56 ISGTFDSGEFAQGKLLAGRSGY---DVVVITSNLLPNLIKAGVLQELEHQDLKEWSNLDP 112
Query: 67 HKWKRTR----GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGRIS- 119
K G +A PY WG IAY K R++ AP W +++ E ++S
Sbjct: 113 QVMKNLSATDPGNRYAVPYLWGTTGIAYDAEKVRQYLGAEAPTNSWDLIFKEENISKLSK 172
Query: 120 ----MVNSPREVIGSVLKYMGASYNSNN 143
M++S E++ L Y+G YNS N
Sbjct: 173 CGVAMLDSSTEILSIALNYLGLPYNSQN 200
>gi|379011271|ref|YP_005269083.1| spermidine/putrescine ABC transport system binding protein PotD
[Acetobacterium woodii DSM 1030]
gi|375302060|gb|AFA48194.1| spermidine/putrescine ABC transport system binding protein PotD
[Acetobacterium woodii DSM 1030]
Length = 348
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 20 KVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW--FKCLSHKWKRTRGKIW 77
KVK S +Y D++ D + I++ +++PI+ + S G +
Sbjct: 67 KVKNSSDTY---DVLVPSDYMIERLIKEDMLQPISKDNIPNLANIDASSMNLAFDPGNQY 123
Query: 78 AAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGA 137
+ PY +G + I Y + P++ W LW + A +I M +S R+ +G+ LK +G
Sbjct: 124 SVPYFYGVLGIVYNTDQVTD----PVDSWNILWNDKYASKILMYDSIRDSMGASLKRLGF 179
Query: 138 SYNSNN 143
S N N
Sbjct: 180 SMNETN 185
>gi|342215905|ref|ZP_08708552.1| ABC transporter, solute-binding protein [Peptoniphilus sp. oral
taxon 375 str. F0436]
gi|341586795|gb|EGS30195.1| ABC transporter, solute-binding protein [Peptoniphilus sp. oral
taxon 375 str. F0436]
Length = 343
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 8/136 (5%)
Query: 25 SASYMAADLVSVGDPWLSFAIEKRLIEPI---AGGEDQDWFKCLSHKWKRTRGKIWAAPY 81
S+S A D+V D + I++ L++ I A Q F L + G ++ PY
Sbjct: 66 SSSTEAYDVVVPSDYLIERCIKEDLVQKINKEAVPNFQGIFDSLKNP-SYDPGSQYSVPY 124
Query: 82 RWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS 141
WG + + Y ++ ++ W LW + G+I M +S R+ + LK +G S NS
Sbjct: 125 FWGTLGVVYNGKNIKEK----LDSWDCLWDGKYKGKILMYDSQRDSLAIALKRLGFSMNS 180
Query: 142 NNIDSQVAGGKVAVQQ 157
I V +QQ
Sbjct: 181 KKIQELVQAKDSLIQQ 196
>gi|334119180|ref|ZP_08493267.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
gi|333458651|gb|EGK87268.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
Length = 376
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSV 131
G ++ P WG + Y + ++ EDW+ LW + ELA R+++ + REV+G+
Sbjct: 150 GNRYSVPLSWGTTGLIYNTEQLKEEP----EDWEYLWQHKQELAKRMTLASDVREVMGAA 205
Query: 132 LKYMGASYNSNN 143
L+ +G S NS N
Sbjct: 206 LRMLGYSLNSTN 217
>gi|416023675|ref|ZP_11567949.1| ABC transporter, periplasmic polyamine-binding protein [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422407280|ref|ZP_16484280.1| ABC transporter periplasmic polyamine-binding protein [Pseudomonas
syringae pv. glycinea str. race 4]
gi|320331144|gb|EFW87114.1| ABC transporter, periplasmic polyamine-binding protein [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330882492|gb|EGH16641.1| ABC transporter periplasmic polyamine-binding protein [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 367
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFK----CLS 66
F++ + +KV A Y D+V L I+ +++P+ +W L+
Sbjct: 60 FDSAEIMQSKVMAGHTGY---DVVVATSSTLPNLIQAGVLQPLDRSNLSNWPHLDPDILA 116
Query: 67 HKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----IS 119
G +A PY WG I Y K + D AP++ W +++ E + ++
Sbjct: 117 KVSVNDPGNRYAMPYLWGTTGIGYDIDKVKSALGDEAPVDSWDLIFKVENIRKLKECGVA 176
Query: 120 MVNSPREVIGSVLKYMGASYNSNNID 145
M++SP E++ L Y+G +NS N D
Sbjct: 177 MLDSPSEIVSIALHYLGLPHNSQNPD 202
>gi|149377228|ref|ZP_01894976.1| extracellular solute-binding protein, family 1 [Marinobacter
algicola DG893]
gi|149358527|gb|EDM47001.1| extracellular solute-binding protein, family 1 [Marinobacter
algicola DG893]
Length = 368
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGRIS-------MVNSP 124
G ++ PY WG Y + + + D AP + W ++ PE+ G++S M++S
Sbjct: 123 GSQFSLPYLWGTNGYGYNEGRIQDILGDSAPTDSWALVFDPEVTGKLSAGGCGIAMLDSG 182
Query: 125 REVIGSVLKYMGASYNSNNIDSQVAGGKV--AVQQNLALLQN 164
E++ + + Y+G + NSNN + GG+V A + N+ +
Sbjct: 183 EEMVRAAMAYIGLNPNSNNAEDIKKGGEVIKATRPNITYFHS 224
>gi|430751704|ref|YP_007214612.1| spermidine/putrescine-binding periplasmic protein [Thermobacillus
composti KWC4]
gi|430735669|gb|AGA59614.1| spermidine/putrescine-binding periplasmic protein [Thermobacillus
composti KWC4]
Length = 356
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ PY WG + I Y F + P W LW P L I +V+ RE+IG L
Sbjct: 129 GNVYSVPYFWGTVGILYNPEAFDE----PPVSWDALWDPSLRNDILLVDGAREIIGMGLN 184
Query: 134 YMGASYNSNN 143
+G S N +
Sbjct: 185 SLGYSLNDTD 194
>gi|297566796|ref|YP_003685768.1| family 1 extracellular solute-binding protein [Meiothermus silvanus
DSM 9946]
gi|296851245|gb|ADH64260.1| extracellular solute-binding protein family 1 [Meiothermus silvanus
DSM 9946]
Length = 342
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTR---GKIWAAPYRWGAMMI 88
D++ GD + I+ +LI+P + + K L K+ G ++A Y+WG I
Sbjct: 72 DVIVPGDYIIPTLIQLKLIQPFDKSKIPN-LKNLDPKFANPPYDPGNRYSAAYQWGMSGI 130
Query: 89 AYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQV 148
Y+K + + + W + P +G +++S RE++G L+Y+G S NS +
Sbjct: 131 MYRKDR-----VPTPKSWSVILGPGGSGPFVLMDSIREMMGGALRYLGYSINSKDPKQVQ 185
Query: 149 AGGKVAVQ 156
A GKV ++
Sbjct: 186 AAGKVLLE 193
>gi|297588236|ref|ZP_06946879.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Finegoldia magna ATCC
53516]
gi|297573609|gb|EFH92330.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Finegoldia magna ATCC
53516]
Length = 341
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
+ PY WG + I Y K+K + ++ W LW + I M+NS R+ +G LK +G
Sbjct: 120 YTVPYMWGTVGILYNKNKVKDK----VDSWNILWDEKYKDNIIMMNSTRDTLGVALKRLG 175
Query: 137 ASYNSNN 143
S NS N
Sbjct: 176 YSMNSRN 182
>gi|228984460|ref|ZP_04144638.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228775326|gb|EEM23714.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 349
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G S N
Sbjct: 130 YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVVGMGLKKHGFS-N 184
Query: 141 SNNIDSQVAGGKVAVQQNL 159
S D+Q+ +Q+ L
Sbjct: 185 STKDDAQLKTAATDLQKLL 203
>gi|410458782|ref|ZP_11312539.1| spermidine:putrescine ABC transporter [Bacillus azotoformans LMG
9581]
gi|409931132|gb|EKN68120.1| spermidine:putrescine ABC transporter [Bacillus azotoformans LMG
9581]
Length = 357
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + + I W DLW P L +I +++ REV+G L +G
Sbjct: 132 YSIPYFWGTVGIVYNPTLLEGME---ITSWNDLWDPALKNQILLIDGAREVMGMGLNSLG 188
Query: 137 ASYNSNNID 145
S N N D
Sbjct: 189 YSLNDTNKD 197
>gi|34499554|ref|NP_903769.1| polyamine ABC transporter protein [Chromobacterium violaceum ATCC
12472]
gi|34105405|gb|AAQ61760.1| polyamine ABC transporter protein [Chromobacterium violaceum ATCC
12472]
Length = 354
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLA-PIEDWKDLWRPEL----AGRISMVNSPREV 127
+G ++APY + +I Y ++K ++ LA + W ++ P L G++++++S RE+
Sbjct: 113 KGNKYSAPYAFTTTLIGYNETKLKQLGLADKVNSWALIFDPALLAKIKGKVTVLDSQREL 172
Query: 128 IGSVLKYMGASYNSNN 143
I + L Y+G NS N
Sbjct: 173 IAAALMYLGKPANSTN 188
>gi|228920100|ref|ZP_04083449.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|423579582|ref|ZP_17555693.1| hypothetical protein IIA_01097 [Bacillus cereus VD014]
gi|423637961|ref|ZP_17613614.1| hypothetical protein IK7_04370 [Bacillus cereus VD156]
gi|228839556|gb|EEM84848.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|401218044|gb|EJR24729.1| hypothetical protein IIA_01097 [Bacillus cereus VD014]
gi|401272763|gb|EJR78754.1| hypothetical protein IK7_04370 [Bacillus cereus VD156]
Length = 349
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + GR++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGRVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQV 148
S NS D+Q+
Sbjct: 182 FS-NSTKDDAQL 192
>gi|398841879|ref|ZP_10599085.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398107243|gb|EJL97249.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 380
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 22/150 (14%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++ + +KV A Y D+V L I+ +++P+ D++ LSH
Sbjct: 73 FDSAEIMQSKVMAGRTGY---DVVVATSNVLPSLIQAGVLQPL----DRNQLSNLSHIDP 125
Query: 71 RTRGKI--------WAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR--- 117
++ +A PY WG I Y K + D AP+ W +++ E +
Sbjct: 126 DILAQVAVNDPGNRYAVPYLWGTTGIGYDVDKVKAALGDNAPVNSWDLIFKEENISKLKS 185
Query: 118 --ISMVNSPREVIGSVLKYMGASYNSNNID 145
++M++SP E+I L Y+G NS N D
Sbjct: 186 CGVAMLDSPSEIISIALHYLGLPSNSRNPD 215
>gi|77458382|ref|YP_347887.1| spermidine/putrescine transport system substrate-binding protein
[Pseudomonas fluorescens Pf0-1]
gi|77382385|gb|ABA73898.1| putative putrescine ABC transport system, binding exported protein
[Pseudomonas fluorescens Pf0-1]
Length = 365
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 25/161 (15%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPI--------AGGEDQDWF 62
F++L K+ + Y DLV LS AIE I+ + AG D+ F
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIESGAIQTLNKQQLPHFAGVGDE--F 113
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR---- 117
+ H G +A Y WG + Y++ ++ AP + W L+ P + +
Sbjct: 114 R--QHMAVFDPGNRYAGIYAWGTTGVGYQEEAVKQRLPDAPRDSWAMLFDPAVVSKFADC 171
Query: 118 -ISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
+S++N P EV +V+KYMG N ++D K+A QQ
Sbjct: 172 GVSLLNDPNEVFAAVMKYMGLDINRQSLDDL----KLAEQQ 208
>gi|212696357|ref|ZP_03304485.1| hypothetical protein ANHYDRO_00894 [Anaerococcus hydrogenalis DSM
7454]
gi|212676635|gb|EEB36242.1| hypothetical protein ANHYDRO_00894 [Anaerococcus hydrogenalis DSM
7454]
Length = 359
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG+ I Y K++K D + WK+LW P+ G I + RE +G L G
Sbjct: 132 YSIPYFWGSFGIIYNNKKYKKEDFSS---WKNLWDPKFEGEILSFDGARETLGIGLLANG 188
Query: 137 ASYNSNN 143
S N +
Sbjct: 189 KSLNETD 195
>gi|409993243|ref|ZP_11276392.1| extracellular solute-binding protein [Arthrospira platensis str.
Paraca]
gi|291569868|dbj|BAI92140.1| putative spermidine/putrescine ABC transporter substrate-binding
protein [Arthrospira platensis NIES-39]
gi|409935915|gb|EKN77430.1| extracellular solute-binding protein [Arthrospira platensis str.
Paraca]
Length = 363
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSVLKY 134
++ P WG + Y R +P EDW+DLW + +L R++++N REV+G+ L+
Sbjct: 139 YSVPLSWGTTGLIYNS---RLLSSSP-EDWEDLWTYQDQLNRRLTLLNDVREVMGASLRR 194
Query: 135 MGASYNSNN 143
+G SYNS N
Sbjct: 195 LGYSYNSTN 203
>gi|116049175|ref|YP_792023.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
aeruginosa UCBPP-PA14]
gi|296390399|ref|ZP_06879874.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
aeruginosa PAb1]
gi|416873467|ref|ZP_11917525.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
aeruginosa 152504]
gi|421169246|ref|ZP_15627274.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
aeruginosa ATCC 700888]
gi|421175705|ref|ZP_15633378.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
aeruginosa CI27]
gi|115584396|gb|ABJ10411.1| probable polyamine binding/transport protein [Pseudomonas
aeruginosa UCBPP-PA14]
gi|334844926|gb|EGM23495.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
aeruginosa 152504]
gi|404527044|gb|EKA37227.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
aeruginosa ATCC 700888]
gi|404531855|gb|EKA41791.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
aeruginosa CI27]
Length = 370
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 62 FKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKF-RKHDLAPIEDWKDLWRPELAGR--- 117
+ L ++ R+R A PY WG + + + + + R+ AP++ L++PELA R
Sbjct: 110 LRELQARYARSRDA--AVPYTWGTIGLTFNREQIERRLADAPLDSLDLLFKPELAARFAD 167
Query: 118 --ISMVNSPREVIGSVLKYMG 136
IS+++SP EV+ L Y+G
Sbjct: 168 CGISLIDSPDEVLALALHYLG 188
>gi|387760794|ref|YP_006067771.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
salivarius 57.I]
gi|339291561|gb|AEJ52908.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
salivarius 57.I]
Length = 355
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y +K AP + W DLW P+ +I +V+ REV+G L +G
Sbjct: 131 YSIPYFWGTVGIVYNSKLVKK---AP-QHWDDLWSPDYKNQIMLVDGAREVLGFSLNSLG 186
Query: 137 ASYNSNNI 144
S N+ ++
Sbjct: 187 YSLNTKSM 194
>gi|427708603|ref|YP_007050980.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
gi|427361108|gb|AFY43830.1| extracellular solute-binding protein family 1 [Nostoc sp. PCC 7107]
Length = 360
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKY 134
++ P+ WG + Y + AP EDW LW+ + L R++++N REV+G+VL+
Sbjct: 137 YSLPFNWGTTGLIYNSEVLQT---AP-EDWDYLWQNQSILNKRMTLLNDVREVMGAVLRM 192
Query: 135 MGASYNS 141
+G SYNS
Sbjct: 193 LGYSYNS 199
>gi|313106203|ref|ZP_07792456.1| putative polyamine binding/transport protein [Pseudomonas
aeruginosa 39016]
gi|386065042|ref|YP_005980346.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
aeruginosa NCGM2.S1]
gi|310878958|gb|EFQ37552.1| putative polyamine binding/transport protein [Pseudomonas
aeruginosa 39016]
gi|348033601|dbj|BAK88961.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
aeruginosa NCGM2.S1]
Length = 370
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 62 FKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKF-RKHDLAPIEDWKDLWRPELAGR--- 117
+ L ++ R+R A PY WG + + + + + R+ AP++ L++PELA R
Sbjct: 110 LRELQARYARSRDA--AVPYTWGTIGLTFNREQIERRLADAPLDSLDLLFKPELAARFAD 167
Query: 118 --ISMVNSPREVIGSVLKYMG 136
IS+++SP EV+ L Y+G
Sbjct: 168 CGISLIDSPDEVLALALHYLG 188
>gi|385838263|ref|YP_005875893.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Lactococcus lactis subsp. cremoris A76]
gi|358749491|gb|AEU40470.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Lactococcus lactis subsp. cremoris A76]
Length = 355
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------ 71
++KVK +Y DL+ D + IEK E + D K L + +
Sbjct: 75 YSKVKQGGTAY---DLIVPSD----YMIEKMAKENLLLKLDHSKIKGLKNDDPKLLNPAF 127
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
+G ++ PY WG + I Y + P + W D+W P I + +S R+V+ V
Sbjct: 128 DQGNQYSVPYFWGTLGIVYNSKTVK----TPPKTWNDIWSPTYKNSILLTDSVRDVMAMV 183
Query: 132 LKYMGASYNSNN 143
L G S N+ N
Sbjct: 184 LSKHGYSLNTTN 195
>gi|325848745|ref|ZP_08170255.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|325480389|gb|EGC83451.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 345
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG+ I Y K++K D + WK+LW P+ G I + RE +G L G
Sbjct: 118 YSIPYFWGSFGIIYNNKKYKKEDFSS---WKNLWDPKFEGEILSFDGARETLGIGLLANG 174
Query: 137 ASYNSNN 143
S N +
Sbjct: 175 RSLNETD 181
>gi|422745667|ref|ZP_16799606.1| bacterial extracellular solute-binding protein [Staphylococcus
aureus subsp. aureus MRSA131]
gi|320141082|gb|EFW32929.1| bacterial extracellular solute-binding protein [Staphylococcus
aureus subsp. aureus MRSA131]
Length = 357
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|387142714|ref|YP_005731107.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus TW20]
gi|269940597|emb|CBI48976.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus TW20]
Length = 357
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|169826907|ref|YP_001697065.1| spermidine/putrescine-binding periplasmic protein [Lysinibacillus
sphaericus C3-41]
gi|168991395|gb|ACA38935.1| Spermidine/putrescine-binding periplasmic protein precursor (SPBP)
[Lysinibacillus sphaericus C3-41]
Length = 357
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y D + W DLW P L ++ +V+ REVIG L +G
Sbjct: 132 YSVPYFWGTVGIVYNPKLVGNLDFS---SWDDLWDPSLKRKVFLVDGAREVIGMGLNSLG 188
Query: 137 ASYNS 141
S NS
Sbjct: 189 HSLNS 193
>gi|320353641|ref|YP_004194980.1| family 1 extracellular solute-binding protein [Desulfobulbus
propionicus DSM 2032]
gi|320122143|gb|ADW17689.1| extracellular solute-binding protein family 1 [Desulfobulbus
propionicus DSM 2032]
Length = 350
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG+ +A + DLW+PEL G++ + N PREV+G LK
Sbjct: 124 GNGYSVPYMWGSTSLAVNTQVIGGDT---VRKMADLWKPELKGKLLLPNDPREVMGIGLK 180
Query: 134 YMGASYNSNN 143
+G S N +
Sbjct: 181 VLGYSINEKD 190
>gi|288905425|ref|YP_003430647.1| spermidine/putrescine ABC transporter substrate-binding protein
[Streptococcus gallolyticus UCN34]
gi|325978415|ref|YP_004288131.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|386337870|ref|YP_006034039.1| spermidine/putrescine transport system substrate-binding protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
43143]
gi|288732151|emb|CBI13716.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
gallolyticus UCN34]
gi|325178343|emb|CBZ48387.1| potD [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|334280506|dbj|BAK28080.1| spermidine/putrescine transport system substrate-binding protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
43143]
Length = 357
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + AP E W DLW E A I +V+ REV+G L +G
Sbjct: 133 YSIPYFWGTLGIVYNDTMVEN---AP-EHWSDLWNSEYANDIMLVDGAREVMGVGLGTLG 188
Query: 137 ASYNSNNI 144
S N+ ++
Sbjct: 189 YSLNTKSL 196
>gi|291613663|ref|YP_003523820.1| extracellular solute-binding protein family 1 [Sideroxydans
lithotrophicus ES-1]
gi|291583775|gb|ADE11433.1| extracellular solute-binding protein family 1 [Sideroxydans
lithotrophicus ES-1]
Length = 351
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVIG 129
G ++ PY + +I Y K R +L P++ W ++ P ++ G +++++S RE++
Sbjct: 113 GNQYSVPYAYTITLIGYNDVKLRGLEL-PLDSWAAIFEPRYLEKVKGHVTVLDSQRELLA 171
Query: 130 SVLKYMGASYNSNNIDSQ 147
+ LKY+G Y++N+ D Q
Sbjct: 172 AALKYLG--YSANDTDEQ 187
>gi|253731713|ref|ZP_04865878.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253733663|ref|ZP_04867828.1| spermidine/putrescine-binding protein precursor family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|417655595|ref|ZP_12305305.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21193]
gi|417899575|ref|ZP_12543477.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21259]
gi|417901564|ref|ZP_12545440.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21266]
gi|418598462|ref|ZP_13161972.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21343]
gi|253724527|gb|EES93256.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253728363|gb|EES97092.1| spermidine/putrescine-binding protein precursor family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|329728813|gb|EGG65234.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21193]
gi|341844503|gb|EGS85715.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21259]
gi|341845403|gb|EGS86605.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21266]
gi|374399819|gb|EHQ70955.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21343]
Length = 357
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|21282714|ref|NP_645802.1| hypothetical protein MW0985 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485940|ref|YP_043161.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57651711|ref|YP_185975.1| spermidine/putrescine ABC transporter substrate-binding protein
[Staphylococcus aureus subsp. aureus COL]
gi|87160442|ref|YP_493700.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194801|ref|YP_499598.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|151221180|ref|YP_001332002.1| spermidine/putrescine ABC transporter binding protein
[Staphylococcus aureus subsp. aureus str. Newman]
gi|161509283|ref|YP_001574942.1| spermidine/putrescine ABC transporter ATP-binding protein
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221140498|ref|ZP_03564991.1| spermidine/putrescine ABC transporter ATP-binding protein
[Staphylococcus aureus subsp. aureus str. JKD6009]
gi|258451951|ref|ZP_05699967.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A5948]
gi|262048688|ref|ZP_06021570.1| hypothetical protein SAD30_1518 [Staphylococcus aureus D30]
gi|262052208|ref|ZP_06024414.1| hypothetical protein SA930_0899 [Staphylococcus aureus 930918-3]
gi|282925286|ref|ZP_06332943.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A9765]
gi|284024027|ref|ZP_06378425.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus 132]
gi|294848091|ref|ZP_06788838.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A9754]
gi|297208260|ref|ZP_06924690.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|300912337|ref|ZP_07129780.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus TCH70]
gi|304381340|ref|ZP_07363993.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|379014295|ref|YP_005290531.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus aureus subsp. aureus VC40]
gi|384861697|ref|YP_005744417.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|384869635|ref|YP_005752349.1| Spermidine/putrescine ABC transporter, binding protein
[Staphylococcus aureus subsp. aureus T0131]
gi|415689676|ref|ZP_11452904.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus CGS01]
gi|417648467|ref|ZP_12298291.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21189]
gi|418276767|ref|ZP_12891604.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21178]
gi|418284909|ref|ZP_12897612.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21209]
gi|418312572|ref|ZP_12924081.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21334]
gi|418318061|ref|ZP_12929476.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21232]
gi|418571242|ref|ZP_13135481.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21283]
gi|418578933|ref|ZP_13143028.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1114]
gi|418642691|ref|ZP_13204877.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-24]
gi|418644664|ref|ZP_13206804.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-55]
gi|418647730|ref|ZP_13209793.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-88]
gi|418649611|ref|ZP_13211639.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-91]
gi|418660329|ref|ZP_13221959.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-111]
gi|418872027|ref|ZP_13426385.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-125]
gi|418903312|ref|ZP_13457353.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1770]
gi|418906039|ref|ZP_13460066.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|418925272|ref|ZP_13479175.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG2018]
gi|418928359|ref|ZP_13482245.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1612]
gi|418933937|ref|ZP_13487761.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC128]
gi|418949006|ref|ZP_13501278.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-157]
gi|418954507|ref|ZP_13506467.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-189]
gi|418987924|ref|ZP_13535597.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1835]
gi|419775168|ref|ZP_14301110.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus CO-23]
gi|421150743|ref|ZP_15610397.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|422743508|ref|ZP_16797492.1| bacterial extracellular solute-binding protein [Staphylococcus
aureus subsp. aureus MRSA177]
gi|424784929|ref|ZP_18211732.1| ABC transporter, periplasmic spermidine putrescine-binding protein
[Staphylococcus aureus CN79]
gi|440705897|ref|ZP_20886649.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21282]
gi|440734550|ref|ZP_20914162.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus DSM 20231]
gi|443640501|ref|ZP_21124490.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21196]
gi|448742029|ref|ZP_21723984.1| ABC transporter extracellular binding protein [Staphylococcus
aureus KT/314250]
gi|448744664|ref|ZP_21726548.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
KT/Y21]
gi|21204152|dbj|BAB94850.1| potD [Staphylococcus aureus subsp. aureus MW2]
gi|49244383|emb|CAG42811.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57285897|gb|AAW37991.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus COL]
gi|87126416|gb|ABD20930.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|87202359|gb|ABD30169.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein, putative
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|150373980|dbj|BAF67240.1| spermidine/putrescine ABC transporter, binding protein
[Staphylococcus aureus subsp. aureus str. Newman]
gi|160368092|gb|ABX29063.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257860166|gb|EEV82998.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A5948]
gi|259159879|gb|EEW44917.1| hypothetical protein SA930_0899 [Staphylococcus aureus 930918-3]
gi|259163144|gb|EEW47704.1| hypothetical protein SAD30_1518 [Staphylococcus aureus D30]
gi|282592562|gb|EFB97572.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A9765]
gi|294824891|gb|EFG41313.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A9754]
gi|296886999|gb|EFH25902.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|300886583|gb|EFK81785.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus TCH70]
gi|302750926|gb|ADL65103.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|304340323|gb|EFM06264.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|315196132|gb|EFU26489.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus CGS01]
gi|320143139|gb|EFW34929.1| bacterial extracellular solute-binding protein [Staphylococcus
aureus subsp. aureus MRSA177]
gi|329313770|gb|AEB88183.1| Spermidine/putrescine ABC transporter, binding protein
[Staphylococcus aureus subsp. aureus T0131]
gi|329730735|gb|EGG67114.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21189]
gi|365172308|gb|EHM63035.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21209]
gi|365174045|gb|EHM64445.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21178]
gi|365238217|gb|EHM79054.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21334]
gi|365244753|gb|EHM85410.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21232]
gi|371980946|gb|EHO98143.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21283]
gi|374362992|gb|AEZ37097.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus VC40]
gi|375015804|gb|EHS09448.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-24]
gi|375025067|gb|EHS18477.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-55]
gi|375029440|gb|EHS22768.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-88]
gi|375029984|gb|EHS23309.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-91]
gi|375032397|gb|EHS25641.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-111]
gi|375367622|gb|EHS71571.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-125]
gi|375370148|gb|EHS73980.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-157]
gi|375372737|gb|EHS76462.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-189]
gi|377696960|gb|EHT21315.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1114]
gi|377719712|gb|EHT43882.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1835]
gi|377738271|gb|EHT62280.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1612]
gi|377742327|gb|EHT66312.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1770]
gi|377746567|gb|EHT70538.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG2018]
gi|377765339|gb|EHT89189.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|377771717|gb|EHT95471.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC128]
gi|383970852|gb|EID86942.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus CO-23]
gi|394329231|gb|EJE55346.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|421956339|gb|EKU08668.1| ABC transporter, periplasmic spermidine putrescine-binding protein
[Staphylococcus aureus CN79]
gi|436431578|gb|ELP28931.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus DSM 20231]
gi|436507663|gb|ELP43332.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21282]
gi|443405182|gb|ELS63792.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21196]
gi|445547248|gb|ELY15519.1| ABC transporter extracellular binding protein [Staphylococcus
aureus KT/314250]
gi|445561970|gb|ELY18155.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
KT/Y21]
Length = 357
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|409431327|ref|ZP_11262694.1| extracellular solute-binding protein, partial [Pseudomonas sp. HYS]
Length = 340
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWF----KCLSHKWKRTRGKIWAAPYRWGAMM 87
DLV + + I+ ++ +P+ + W + +S+ G +++APY WG+
Sbjct: 52 DLVVLNASLVPPLIKAQVFQPLDKTQLPSWSNLDPQVVSNLQGYDPGLVYSAPYTWGSSG 111
Query: 88 IAYK--KSKFRKHDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 140
+ Y K K R D API L+ P++ R ++++++P EVI LKY+G N
Sbjct: 112 VTYNVDKIKARMPD-APIGSLAMLFDPKIVSRFADCGVTLMDAPSEVIPLALKYLGRDPN 170
Query: 141 SNNID 145
S D
Sbjct: 171 SATAD 175
>gi|399000756|ref|ZP_10703478.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
gi|398129106|gb|EJM18480.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
Length = 367
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 78 AAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSV 131
PY WG + + Y + ++ AP+ L++PELA R IS+++SP EV+ V
Sbjct: 128 TVPYTWGTIGLTYNAEQIKQRMPDAPVNSLDMLFKPELAARFADCGISIIDSPDEVLAVV 187
Query: 132 LKYMGASYNSNNIDSQVAGGKVAVQ 156
L Y+G S + VA ++ ++
Sbjct: 188 LNYLGREPRSAKPEDLVAASELLLK 212
>gi|418316622|ref|ZP_12928059.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21340]
gi|365240901|gb|EHM81660.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21340]
Length = 357
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|317495185|ref|ZP_07953555.1| extracellular solute-binding protein [Gemella morbillorum M424]
gi|316914607|gb|EFV36083.1| extracellular solute-binding protein [Gemella morbillorum M424]
Length = 358
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K+K DL E W DLW L I +++ RE++G L+ G
Sbjct: 131 YSVPYFWGTLGIVYNKTKV-PSDLK-FEKWDDLWDARLENNILLIDGAREMMGIALQSEG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 NSVNDTN 195
>gi|222525176|ref|YP_002569647.1| family 1 extracellular solute-binding protein [Chloroflexus sp.
Y-400-fl]
gi|222449055|gb|ACM53321.1| extracellular solute-binding protein family 1 [Chloroflexus sp.
Y-400-fl]
Length = 350
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
Y+WG + + + PI W DLW+P+LAG+I + PR+ I +LK +G S N
Sbjct: 128 YQWGTTGLLVRTDLVEQ----PITRWADLWKPDLAGKIVLWPIPRDTINVLLKSLGYSIN 183
Query: 141 SNN 143
+ +
Sbjct: 184 TTD 186
>gi|260771114|ref|ZP_05880041.1| predicted polyamine sensor NspS involved in biofilm formation
[Vibrio furnissii CIP 102972]
gi|260613711|gb|EEX38903.1| predicted polyamine sensor NspS involved in biofilm formation
[Vibrio furnissii CIP 102972]
Length = 348
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 59 QDWFKCLSH---------KWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDL 109
QD F+ LSH KW + G A PY WG + IAY+KSK + P DW L
Sbjct: 89 QDLFEDLSHLPNRDNNAAKWNQACGS-HAVPYFWGYVGIAYRKSKLAE----PPTDWSQL 143
Query: 110 WR--PELAGRISMVNSPREVIGSVLKYMGASYNSNNID 145
P + G + +++ E + L +G S +++ID
Sbjct: 144 VHIAPNMRGHVGLISDSVETLLPTLYSLGVSPITDSID 181
>gi|375130108|ref|YP_004992207.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio furnissii NCTC 11218]
gi|315179281|gb|ADT86195.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, hypothetical
[Vibrio furnissii NCTC 11218]
Length = 348
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 59 QDWFKCLSH---------KWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDL 109
QD F+ LSH KW + G A PY WG + IAY+KSK + P DW L
Sbjct: 89 QDLFEDLSHLPNRDNNAAKWNQACGS-HAVPYFWGYVGIAYRKSKLAE----PPTDWSQL 143
Query: 110 WR--PELAGRISMVNSPREVIGSVLKYMGASYNSNNID 145
P + G + +++ E + L +G S +++ID
Sbjct: 144 VHIAPNMRGHVGLISDSVETLLPTLYSLGVSPITDSID 181
>gi|418911709|ref|ZP_13465692.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG547]
gi|377725087|gb|EHT49202.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG547]
Length = 357
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|322389761|ref|ZP_08063308.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus
parasanguinis ATCC 903]
gi|321143600|gb|EFX39031.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus
parasanguinis ATCC 903]
Length = 356
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEP-----IAGGEDQDWFKCLSHKWKRT 72
+ K+K +Y D+ + ++ +++ L+E I G E+ D K L+ +
Sbjct: 74 YTKIKQGGTTY---DIAIPSEYMIAKMMDEHLVEKLDQSKIKGMENIDP-KLLNQSFDP- 128
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
G ++ PY WG + I Y + AP E W DLWR E I M + REV+G L
Sbjct: 129 -GNQYSVPYFWGTLGIVYNTKMVKN---AP-EHWSDLWREEYRNDIMMYDGAREVMGIGL 183
Query: 133 KYMGASYNSNN 143
+G S N +
Sbjct: 184 NTLGYSLNEKD 194
>gi|402702295|ref|ZP_10850274.1| extracellular solute-binding protein [Pseudomonas fragi A22]
Length = 366
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +A PY +G ++I + +K + D AP++ W +++PE + ++M++SP E
Sbjct: 123 GNQYAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLVFKPENMEKLKSCGVAMLDSPSE 182
Query: 127 VIGSVLKYMGASYNSNN 143
++ L Y+G NS N
Sbjct: 183 ILPLALHYLGLDPNSQN 199
>gi|337282199|ref|YP_004621670.1| spermidine/putrescine ABC transporter binding protein
[Streptococcus parasanguinis ATCC 15912]
gi|417917207|ref|ZP_12560769.1| ABC transporter, solute-binding protein [Streptococcus
parasanguinis SK236]
gi|335369792|gb|AEH55742.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus
parasanguinis ATCC 15912]
gi|342830856|gb|EGU65181.1| ABC transporter, solute-binding protein [Streptococcus
parasanguinis SK236]
Length = 356
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEP-----IAGGEDQDWFKCLSHKWKRT 72
+ K+K +Y D+ + ++ +++ L+E I G E+ D K L+ +
Sbjct: 74 YTKIKQGGTTY---DIAIPSEYMIAKMMDEHLVEKLDQSKIKGMENIDP-KLLNQSFDP- 128
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
G ++ PY WG + I Y + AP E W DLWR E I M + REV+G L
Sbjct: 129 -GNQYSVPYFWGTLGIVYNTKMVKN---AP-EHWSDLWREEYRNDIMMYDGAREVMGIGL 183
Query: 133 KYMGASYNSNN 143
+G S N +
Sbjct: 184 NTLGYSLNEKD 194
>gi|210623638|ref|ZP_03293964.1| hypothetical protein CLOHIR_01914 [Clostridium hiranonis DSM 13275]
gi|210153508|gb|EEA84514.1| hypothetical protein CLOHIR_01914 [Clostridium hiranonis DSM 13275]
Length = 351
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + +AY + DL W LW P+ G+I + +S R+ +G+ L +G
Sbjct: 129 YSVPYMWGTLGLAYNSKYVDEKDLGS---WDILWNPKYKGKILIFDSVRDTMGAALFKLG 185
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S N+ N ++ V+Q
Sbjct: 186 YSMNTTNPKEINEAKELLVKQ 206
>gi|163847330|ref|YP_001635374.1| extracellular solute-binding protein [Chloroflexus aurantiacus
J-10-fl]
gi|163668619|gb|ABY34985.1| extracellular solute-binding protein family 1 [Chloroflexus
aurantiacus J-10-fl]
Length = 312
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
Y+WG + + + PI W DLW+P+LAG+I + PR+ I +LK +G S N
Sbjct: 90 YQWGTTGLLVRTDLVEQ----PITRWADLWKPDLAGKIVLWPIPRDTINVLLKSLGYSIN 145
Query: 141 SNN 143
+ +
Sbjct: 146 TTD 148
>gi|376006159|ref|ZP_09783485.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|375325462|emb|CCE19238.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
Length = 363
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSVLKY 134
++ P WG + Y EDW+DLW + +L R++++N REV+G+ L+
Sbjct: 139 YSVPLSWGTTGLIYNSRLLSNSP----EDWEDLWTYQDQLNRRLTLLNDVREVMGASLRR 194
Query: 135 MGASYNSNN 143
+G SYNS N
Sbjct: 195 LGYSYNSTN 203
>gi|414155759|ref|ZP_11412069.1| hypothetical protein HMPREF9186_00489 [Streptococcus sp. F0442]
gi|410872694|gb|EKS20635.1| hypothetical protein HMPREF9186_00489 [Streptococcus sp. F0442]
Length = 356
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 15/131 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEP-----IAGGEDQDWFKCLSHKWKRT 72
+ K+K +Y D+ + ++ +++ L+E I G E+ D K L+ +
Sbjct: 74 YTKIKQGGTTY---DIAIPSEYMIAKMMDEHLVEKLDQSKIKGMENIDP-KLLNQSFDP- 128
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
G ++ PY WG + I Y ++ AP E W DLWR E I M + REV+G L
Sbjct: 129 -GNQYSVPYFWGTLGIIYNTKMVKE---AP-EHWSDLWREEYRNDIMMYDGAREVMGIGL 183
Query: 133 KYMGASYNSNN 143
+G S N +
Sbjct: 184 NTLGYSLNEKD 194
>gi|392423252|ref|YP_006459856.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
gi|390985440|gb|AFM35433.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
Length = 365
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 20/150 (13%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGE-------DQDWF 62
+F++ + K+ A S+ Y D+V +P+L+ I+ + + + + D+D
Sbjct: 57 VFDSNEVLEAKLLAGSSGY---DVVVPSNPFLAKQIKAGVFQMLDKSKLPNWENLDKDLL 113
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR--- 117
K L G ++ PY WG + I Y K + D AP++ W +++PE +
Sbjct: 114 KALD---PSDPGNQYSIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKS 170
Query: 118 --ISMVNSPREVIGSVLKYMGASYNSNNID 145
+S ++SP E++ + L Y+G + +S D
Sbjct: 171 CGVSFLDSPTEILPAALHYLGYAPDSGKAD 200
>gi|384179321|ref|YP_005565083.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324325405|gb|ADY20665.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 349
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKDDAQLKTAATDLQKLL 203
>gi|402553230|ref|YP_006594501.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus FRI-35]
gi|401794440|gb|AFQ08299.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus FRI-35]
Length = 349
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKDDAQLKTAATDLQKLL 203
>gi|398978560|ref|ZP_10687883.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
gi|398136960|gb|EJM26034.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
Length = 365
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 25/161 (15%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPI--------AGGEDQDWF 62
F++L K+ + Y DLV LS AIE I+ + AG D+ F
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIESGAIQTLNKQQLPHFAGVGDE--F 113
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR---- 117
+ H G +A Y WG + Y++ ++ AP + W L+ P + +
Sbjct: 114 R--QHMAVFDPGNRYAGIYAWGTTGVGYQEEAVQQRLPDAPRDSWAMLFDPAVVSKFADC 171
Query: 118 -ISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
+S++N P EV +V+KYMG N ++D K+A QQ
Sbjct: 172 GVSLLNDPNEVFAAVMKYMGLDINRQSLDDL----KLAEQQ 208
>gi|206977547|ref|ZP_03238441.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
H3081.97]
gi|217958863|ref|YP_002337411.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH187]
gi|222095022|ref|YP_002529082.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus Q1]
gi|375283358|ref|YP_005103796.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus NC7401]
gi|423354129|ref|ZP_17331755.1| hypothetical protein IAU_02204 [Bacillus cereus IS075]
gi|423371369|ref|ZP_17348709.1| hypothetical protein IC5_00425 [Bacillus cereus AND1407]
gi|423569696|ref|ZP_17545942.1| hypothetical protein II7_02918 [Bacillus cereus MSX-A12]
gi|206744265|gb|EDZ55678.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
H3081.97]
gi|217065950|gb|ACJ80200.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH187]
gi|221239080|gb|ACM11790.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Q1]
gi|358351884|dbj|BAL17056.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NC7401]
gi|401087330|gb|EJP95534.1| hypothetical protein IAU_02204 [Bacillus cereus IS075]
gi|401103195|gb|EJQ11180.1| hypothetical protein IC5_00425 [Bacillus cereus AND1407]
gi|401205915|gb|EJR12713.1| hypothetical protein II7_02918 [Bacillus cereus MSX-A12]
Length = 349
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKDDAQLKTAATDLQKLL 203
>gi|423576894|ref|ZP_17553013.1| hypothetical protein II9_04115 [Bacillus cereus MSX-D12]
gi|423606908|ref|ZP_17582801.1| hypothetical protein IIK_03489 [Bacillus cereus VD102]
gi|401206644|gb|EJR13432.1| hypothetical protein II9_04115 [Bacillus cereus MSX-D12]
gi|401241098|gb|EJR47490.1| hypothetical protein IIK_03489 [Bacillus cereus VD102]
Length = 349
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKDDAQLKTAATDLQKLL 203
>gi|306831506|ref|ZP_07464664.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|304426291|gb|EFM29405.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
Length = 357
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + AP E W DLW E A I +V+ REV+G L +G
Sbjct: 133 YSIPYFWGTLGIVYNDTMVEN---AP-EHWSDLWNSEYANDIMLVDGAREVMGIGLGTLG 188
Query: 137 ASYNSNNI 144
S N+ ++
Sbjct: 189 YSLNTKSL 196
>gi|42780475|ref|NP_977722.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus ATCC 10987]
gi|42736394|gb|AAS40330.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10987]
Length = 349
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKDDAQLKTAATDLQKLL 203
>gi|229029058|ref|ZP_04185157.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1271]
gi|228732338|gb|EEL83221.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1271]
Length = 349
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKDDAQLKTAATDLQKLL 203
>gi|229138074|ref|ZP_04266672.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST26]
gi|229195584|ref|ZP_04322350.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1293]
gi|228587833|gb|EEK45885.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1293]
gi|228645419|gb|EEL01653.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST26]
Length = 306
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G S N
Sbjct: 87 YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-N 141
Query: 141 SNNIDSQVAGGKVAVQQNLALL 162
S D+Q+ +Q+ L L
Sbjct: 142 STKDDAQLKTAATDLQKLLPNL 163
>gi|417852728|ref|ZP_12498229.1| PotD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
gi|338216363|gb|EGP02483.1| PotD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
Length = 348
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ P +GA IAY + D + + W+DLW E G++ M++ PRE+ L
Sbjct: 121 KGNKYSLPQLFGATGIAYNTTN---QDPSHFQSWRDLWNAEFKGKVQMLDDPRELFNIAL 177
Query: 133 KYMGASYNSNN 143
MG N+ +
Sbjct: 178 LKMGKDPNTQD 188
>gi|227889655|ref|ZP_04007460.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus johnsonii
ATCC 33200]
gi|227849798|gb|EEJ59884.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus johnsonii
ATCC 33200]
Length = 357
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF K I+ W DLW + I +V+S R+++G L MG
Sbjct: 132 YSVPYFWGTLGIVYN-DKFVKP--GQIKHWNDLWSKDYRHNILLVDSARDIMGLSLASMG 188
Query: 137 ASYN-SNNIDSQVAGGKV 153
S N +N++D ++A K+
Sbjct: 189 KSLNTTNSLDLKLAKTKL 206
>gi|399054172|ref|ZP_10742802.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. CF112]
gi|433544690|ref|ZP_20501067.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus agri BAB-2500]
gi|398048070|gb|EJL40562.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. CF112]
gi|432184038|gb|ELK41562.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus agri BAB-2500]
Length = 350
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 20 KVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR---TRGKI 76
K++A ++ Y DL+ D ++ I+ L+E + E+ K + +K +
Sbjct: 72 KIQAGASGY---DLIQPSDYMVATMIQLGLLEEL-NKENIPNMKNIVSTFKTPPFDKENK 127
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ + W DLW GR+ M+N PREV+G L G
Sbjct: 128 YSLVYTWGITGIAYNKKYVKETPTS----WSDLWNEAYKGRVIMLNDPREVMGMALIKNG 183
Query: 137 ASYNSNNIDS 146
S ++ N D
Sbjct: 184 FSNSTTNKDE 193
>gi|306833615|ref|ZP_07466742.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus bovis ATCC
700338]
gi|336064370|ref|YP_004559229.1| spermidine/putrescine transport system substrate-binding protein
[Streptococcus pasteurianus ATCC 43144]
gi|304424385|gb|EFM27524.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus bovis ATCC
700338]
gi|334282570|dbj|BAK30143.1| spermidine/putrescine transport system substrate-binding protein
[Streptococcus pasteurianus ATCC 43144]
Length = 357
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + AP E W DLW E A I +V+ REV+G L +G
Sbjct: 133 YSIPYFWGTLGIVYNDTMVEN---AP-EHWSDLWNSEYANDIMLVDGAREVMGIGLGTLG 188
Query: 137 ASYNSNNI 144
S N+ ++
Sbjct: 189 YSLNTKSL 196
>gi|268319788|ref|YP_003293444.1| Spermidine/putrescine ABC transporter solute-binding component
[Lactobacillus johnsonii FI9785]
gi|262398163|emb|CAX67177.1| Spermidine/putrescine ABC transporter solute-binding component
[Lactobacillus johnsonii FI9785]
Length = 357
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF K I+ W DLW + I +V+S R+++G L MG
Sbjct: 132 YSVPYFWGTLGIVYN-DKFVKP--GQIKHWNDLWSKDYRHNILLVDSARDIMGLSLASMG 188
Query: 137 ASYN-SNNIDSQVAGGKV 153
S N +N++D ++A K+
Sbjct: 189 KSLNTTNSLDLKLAKTKL 206
>gi|37675937|ref|NP_936333.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio vulnificus YJ016]
gi|37200477|dbj|BAC96303.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio vulnificus
YJ016]
Length = 360
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG I+Y +S AP+ W DLW + A ++ +++ R+V G LK G
Sbjct: 138 YSLPYIWGITGISYNESMVD----APVTRWADLWDKKYAQQVMLIDDIRDVFGMALKLNG 193
Query: 137 ASYNSNNIDS--QVAGGKVAVQQNLAL 161
S N+ N D + VA++ N+ L
Sbjct: 194 YSINTKNEDEIKKAYESLVALKNNVLL 220
>gi|385826191|ref|YP_005862533.1| ABC transporter solute-binding component [Lactobacillus johnsonii
DPC 6026]
gi|329667635|gb|AEB93583.1| ABC transporter solute-binding component [Lactobacillus johnsonii
DPC 6026]
Length = 357
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF K I+ W DLW + I +V+S R+++G L MG
Sbjct: 132 YSVPYFWGTLGIVYN-DKFVKP--GQIKHWNDLWSKDYRHNILLVDSARDIMGLSLASMG 188
Query: 137 ASYN-SNNIDSQVAGGKV 153
S N +N++D ++A K+
Sbjct: 189 KSLNTTNSLDLKLAKTKL 206
>gi|320158082|ref|YP_004190460.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio vulnificus MO6-24/O]
gi|319933394|gb|ADV88257.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio vulnificus MO6-24/O]
Length = 344
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG I+Y +S AP+ W DLW + A ++ +++ R+V G LK G
Sbjct: 122 YSLPYIWGITGISYNESMVD----APVTRWADLWDKKYAQQVMLIDDIRDVFGMALKLNG 177
Query: 137 ASYNSNNIDS--QVAGGKVAVQQNLAL 161
S N+ N D + VA++ N+ L
Sbjct: 178 YSINTKNEDEIKKAYESLVALKNNVLL 204
>gi|229154954|ref|ZP_04283068.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 4342]
gi|228628512|gb|EEK85225.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 4342]
Length = 349
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKDDAQLKTAATDLQKLL 203
>gi|431793658|ref|YP_007220563.1| spermidine/putrescine-binding periplasmic protein
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430783884|gb|AGA69167.1| spermidine/putrescine-binding periplasmic protein
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 349
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 17/151 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAG------GEDQDWFKCLSHKWKR 71
+ K+KA +A Y D+ D +S I + ++ I + D FK L+ K
Sbjct: 70 YVKIKAGTAKY---DVAIPSDYMISKMITEDMLHTIDMNAIPNYAKIDDRFKNLAFDAKN 126
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y K+ ++ ++ W LW + +I M++S R+ I
Sbjct: 127 Q----YSVPYMWGTVGIIYNKTMVKE----AVDSWDVLWDEKYTKQILMLDSQRDSIAVA 178
Query: 132 LKYMGASYNSNNIDSQVAGGKVAVQQNLALL 162
LK +G S NS + ++ +QQ L+
Sbjct: 179 LKKLGYSLNSRDEKELAEAKELLIQQKPLLM 209
>gi|429728341|ref|ZP_19263067.1| putrescine ABC transporter, periplasmic spermidine
[Peptostreptococcus anaerobius VPI 4330]
gi|429149840|gb|EKX92802.1| putrescine ABC transporter, periplasmic spermidine
[Peptostreptococcus anaerobius VPI 4330]
Length = 352
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
++ + + KVK+ S Y DLV D + + L++ I + +K + +++
Sbjct: 66 YDTNEMMYQKVKSGSTKY---DLVFPSDYMIQKMSREGLLKKINFNNIPN-YKYIDKEFR 121
Query: 71 RTR---GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREV 127
+ ++ PY WG + I Y KS + P++ W LW + I M +S R+
Sbjct: 122 NVKYDPTNEYSVPYMWGTLGIVYNKSMVKD----PVDSWDILWNDKYRRNILMFDSVRDT 177
Query: 128 IGSVLKYMGASYNSNN 143
IG LK +G S NS N
Sbjct: 178 IGVSLKRLGFSMNSVN 193
>gi|205372303|ref|ZP_03225117.1| extracellular solute-binding protein [Bacillus coahuilensis m4-4]
Length = 356
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + W DLW P L I +V+ REV+G L +G
Sbjct: 132 YSIPYFWGTVGIVYNPTMVE----GEFTSWDDLWDPSLKNEILLVDGAREVMGFALNSLG 187
Query: 137 ASYNSNN 143
S N N
Sbjct: 188 YSLNDTN 194
>gi|42518816|ref|NP_964746.1| spermidine/putrescine ABC transporter solute-binding component
[Lactobacillus johnsonii NCC 533]
gi|417837881|ref|ZP_12484119.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Lactobacillus johnsonii pf01]
gi|41583102|gb|AAS08712.1| ABC transporter solute-binding component, Spermidine/putrescine
[Lactobacillus johnsonii NCC 533]
gi|338761424|gb|EGP12693.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Lactobacillus johnsonii pf01]
Length = 357
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF K I+ W DLW + I +V+S R+++G L MG
Sbjct: 132 YSVPYFWGTLGIVYN-DKFVKP--GQIKHWNDLWSKDYRHNILLVDSARDIMGLSLASMG 188
Query: 137 ASYN-SNNIDSQVAGGKV 153
S N +N++D ++A K+
Sbjct: 189 KSLNTTNSLDLKLAKTKL 206
>gi|325274742|ref|ZP_08140781.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
gi|324100118|gb|EGB97925.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
Length = 219
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----ISMVNSPREV 127
G +A PY WG + + R+ P++ L++PE A R I+M +SP+EV
Sbjct: 117 GNRYAVPYTWGTLGLGVNVQAVRQRLGEVPLDSLDLLFKPEYASRLKDCGIAMPDSPQEV 176
Query: 128 IGSVLKYMGASYNSNNIDSQVAGGKVAVQ 156
IG L Y+G S + D A K+ Q
Sbjct: 177 IGVALNYLGKDPYSQSKDDLAAAQKLLGQ 205
>gi|27367812|ref|NP_763339.1| ABC transporter periplasmic spermidine putrescine-binding protein
potD [Vibrio vulnificus CMCP6]
gi|27359385|gb|AAO08329.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Vibrio vulnificus CMCP6]
Length = 360
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG I+Y +S AP+ W DLW + A ++ +++ R+V G LK G
Sbjct: 138 YSLPYIWGITGISYNESMVD----APVTRWADLWDKKYAQQVMLIDDIRDVFGMALKLNG 193
Query: 137 ASYNSNNIDS--QVAGGKVAVQQNLAL 161
S N+ N D + VA++ N+ L
Sbjct: 194 YSINTKNEDEIKKAYESLVALKNNVLL 220
>gi|409396641|ref|ZP_11247621.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
gi|409118823|gb|EKM95214.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
Length = 365
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKW 69
+F++ + K+ A S+ Y D+V +P+L+ I+ + + + + +W
Sbjct: 57 VFDSNEVLEAKLLAGSSGY---DVVVPSNPFLAKQIKAGVFQKLDKSKLSNWENLDKSLL 113
Query: 70 K----RTRGKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPE-----LAGRI 118
K G +A PY WG + I Y K + D AP++ W +++PE A +
Sbjct: 114 KALDPSDPGNQYAIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKACGV 173
Query: 119 SMVNSPREVIGSVLKYMGASYNSNNID 145
S ++SP E++ + L Y+G + +S D
Sbjct: 174 SFLDSPTEILPAALHYLGYAPDSGKAD 200
>gi|398844173|ref|ZP_10601270.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398254831|gb|EJN39891.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 367
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWF----KCLSHKWKRTRGKIWAAPYRWGAMM 87
DLV + + I+ ++ +P+ + W + + H G +++APY WG+
Sbjct: 79 DLVMLNASLVPPLIKAKVFQPLDKSKLPSWANLDPQVVEHMQAFDPGMVYSAPYTWGSSG 138
Query: 88 IAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMG 136
I Y K ++ API L+ P++ R ++++++P EVI LKY+G
Sbjct: 139 ITYNVDKIKQRMPDAPIGSLAMLFDPKIVSRFADCGVTIMDAPSEVIPLALKYLG 193
>gi|196040686|ref|ZP_03107985.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NVH0597-99]
gi|229090340|ref|ZP_04221584.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-42]
gi|196028476|gb|EDX67084.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NVH0597-99]
gi|228693034|gb|EEL46751.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-42]
Length = 349
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLGMGLKKNG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKDDAQLKTAATDLQKLL 203
>gi|126649834|ref|ZP_01722070.1| spermidine:putrescine ABC transporter [Bacillus sp. B14905]
gi|126593553|gb|EAZ87498.1| spermidine:putrescine ABC transporter [Bacillus sp. B14905]
Length = 357
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y D + W DLW P L ++ +V+ REVIG L +G
Sbjct: 132 FSVPYFWGTVGIVYNPKLVGNLDFS---SWDDLWDPSLKRKVFLVDGAREVIGMGLNSLG 188
Query: 137 ASYNS 141
S NS
Sbjct: 189 HSLNS 193
>gi|398901123|ref|ZP_10650074.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398180242|gb|EJM67828.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 380
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 22/150 (14%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++ + +KV A Y D+V L I+ +++P+ D++ LSH
Sbjct: 73 FDSAEIMQSKVMAGRTGY---DVVVATSNVLPSLIQAGVLQPL----DRNQLSNLSHIDP 125
Query: 71 RTRGKI--------WAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR--- 117
++ +A PY WG I Y K + D AP+ W +++ E +
Sbjct: 126 DILSQVAVNDPGNRYAVPYLWGTTGIGYDVDKVKAVLGDNAPVNSWDLIFKEENISKLKS 185
Query: 118 --ISMVNSPREVIGSVLKYMGASYNSNNID 145
++M++SP E+I L Y+G NS N D
Sbjct: 186 CGVAMLDSPSEIISIALHYLGLPSNSRNPD 215
>gi|167634382|ref|ZP_02392703.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0442]
gi|170686738|ref|ZP_02877958.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0465]
gi|254682552|ref|ZP_05146413.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. CNEVA-9066]
gi|254726214|ref|ZP_05187996.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A1055]
gi|254740343|ref|ZP_05198034.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Kruger B]
gi|421637888|ref|ZP_16078485.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. BF1]
gi|167530270|gb|EDR92996.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0442]
gi|170669261|gb|EDT20004.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0465]
gi|403395447|gb|EJY92686.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. BF1]
Length = 345
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 122 YSLVYTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLGMGLKKNG 177
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 178 FS-NSTKDDAQLKTAATDLQKLL 199
>gi|30261391|ref|NP_843768.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. Ames]
gi|47526566|ref|YP_017915.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. 'Ames Ancestor']
gi|49184220|ref|YP_027472.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. Sterne]
gi|65318655|ref|ZP_00391614.1| COG0687: Spermidine/putrescine-binding periplasmic protein
[Bacillus anthracis str. A2012]
gi|165870372|ref|ZP_02215027.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0488]
gi|167639331|ref|ZP_02397603.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0193]
gi|170706266|ref|ZP_02896727.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0389]
gi|177651500|ref|ZP_02934289.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0174]
gi|190568736|ref|ZP_03021640.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227815871|ref|YP_002815880.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus anthracis str. CDC 684]
gi|229602179|ref|YP_002865806.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0248]
gi|254733970|ref|ZP_05191684.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Western North America USA6153]
gi|254753730|ref|ZP_05205765.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Vollum]
gi|254758826|ref|ZP_05210853.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Australia 94]
gi|386735088|ref|YP_006208269.1| Extracellular solute-binding protein family 1 precursor [Bacillus
anthracis str. H9401]
gi|421507071|ref|ZP_15953992.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. UR-1]
gi|30255245|gb|AAP25254.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Ames]
gi|47501714|gb|AAT30390.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49178147|gb|AAT53523.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Sterne]
gi|164713867|gb|EDR19389.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0488]
gi|167512770|gb|EDR88144.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0193]
gi|170128800|gb|EDS97666.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0389]
gi|172082778|gb|EDT67841.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0174]
gi|190560152|gb|EDV14133.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227005570|gb|ACP15313.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. CDC 684]
gi|229266587|gb|ACQ48224.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0248]
gi|384384940|gb|AFH82601.1| Extracellular solute-binding protein family 1 precursor [Bacillus
anthracis str. H9401]
gi|401822723|gb|EJT21872.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. UR-1]
Length = 345
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G S N
Sbjct: 126 YTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-N 180
Query: 141 SNNIDSQVAGGKVAVQQNL 159
S D+Q+ +Q+ L
Sbjct: 181 STKDDAQLKTAATDLQKLL 199
>gi|146280464|ref|YP_001170617.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|339492153|ref|YP_004712446.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|386018709|ref|YP_005936733.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
gi|145568669|gb|ABP77775.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|327478681|gb|AEA81991.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
gi|338799525|gb|AEJ03357.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 365
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 20/150 (13%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGE-------DQDWF 62
+F++ + K+ A S+ Y D+V +P+L+ I+ + + + + D+D
Sbjct: 57 VFDSNEVLEAKLLAGSSGY---DVVVPSNPFLAKQIKAGVFQKLDKSKLPNWENLDKDLL 113
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR--- 117
K L G ++ PY WG + I Y K + D AP++ W +++PE +
Sbjct: 114 KALD---SSDPGNQYSIPYMWGTIGIGYNVDKVKAALGDNAPVDSWDLVFKPENIEKLKS 170
Query: 118 --ISMVNSPREVIGSVLKYMGASYNSNNID 145
++ ++SP E++ + L Y+G + +S D
Sbjct: 171 CGVAFLDSPTEMLPAALHYLGYATDSGKAD 200
>gi|355648084|ref|ZP_09055411.1| hypothetical protein HMPREF1030_04497, partial [Pseudomonas sp.
2_1_26]
gi|354827518|gb|EHF11665.1| hypothetical protein HMPREF1030_04497, partial [Pseudomonas sp.
2_1_26]
Length = 260
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 65 LSHKWKRTRGKIWAAPYRWGAMMIAYKKSKF-RKHDLAPIEDWKDLWRPELAGR-----I 118
L ++ R+R A PY WG + + + + + R+ AP++ L++PELA R I
Sbjct: 3 LQARYARSRDA--AVPYTWGTIGLTFNREQIERRLADAPLDSLDLLFKPELAARFADCGI 60
Query: 119 SMVNSPREVIGSVLKYMG 136
S+++SP EV+ L Y+G
Sbjct: 61 SLIDSPDEVLALALHYLG 78
>gi|259047495|ref|ZP_05737896.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Granulicatella adiacens
ATCC 49175]
gi|259035686|gb|EEW36941.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Granulicatella adiacens
ATCC 49175]
Length = 356
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K+ + + I +W+DLW+ E I ++ RE++G L+ G
Sbjct: 131 YSIPYFWGTLGIVYNKNVYPE---GTISEWRDLWKEEFKDSILFIDGAREMMGIALQTQG 187
Query: 137 ASYNSNN 143
S N +
Sbjct: 188 YSLNEKD 194
>gi|228932668|ref|ZP_04095542.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228826986|gb|EEM72746.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 349
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLGMGLKKNG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKDDAQLKTAATDLQKLL 203
>gi|219848607|ref|YP_002463040.1| family 1 extracellular solute-binding protein [Chloroflexus
aggregans DSM 9485]
gi|219542866|gb|ACL24604.1| extracellular solute-binding protein family 1 [Chloroflexus
aggregans DSM 9485]
Length = 398
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G+ ++ Y+WG + + + PI+ W DLW P L G+I + PR+ I +LK
Sbjct: 169 GERYSVIYQWGITGLLVRTDLLAR----PIKRWSDLWNPTLDGKILLWPIPRDTINVLLK 224
Query: 134 YMGASYNSNNID 145
+G S N+ + D
Sbjct: 225 SLGYSINTTDTD 236
>gi|164687396|ref|ZP_02211424.1| hypothetical protein CLOBAR_01037 [Clostridium bartlettii DSM
16795]
gi|164603170|gb|EDQ96635.1| ABC transporter, solute-binding protein [Clostridium bartlettii DSM
16795]
Length = 351
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLS---HKWKRTRG 74
+ K+K+ S+ Y DL+ D + IE+ +++ I ++ + + H
Sbjct: 70 YQKLKSGSSKY---DLIFPSDYMVDKLIEENMLQKIDYSNIPNYSQIMDSFKHPLYDPTD 126
Query: 75 KIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKY 134
+ ++ PY WG I Y K D + W LW + G+I +++S R+ +G LK
Sbjct: 127 E-YSVPYLWGTFGIIYNTKVVDKED---TKSWDILWNKKYKGKILLLDSVRDTMGISLKR 182
Query: 135 MGASYNSNNIDSQVAGGKVAVQQNLALLQ 163
+G S N+ N D ++ K + + L ++Q
Sbjct: 183 LGYSMNTENPD-EINKAKDELIKELDVVQ 210
>gi|289422860|ref|ZP_06424692.1| spermidine/putrescine-binding periplasmic protein
[Peptostreptococcus anaerobius 653-L]
gi|289156722|gb|EFD05355.1| spermidine/putrescine-binding periplasmic protein
[Peptostreptococcus anaerobius 653-L]
Length = 352
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
++ + + KVK+ S Y DLV D + + L++ I + +K + +++
Sbjct: 66 YDTNEMMYQKVKSGSTKY---DLVFPSDYMIQKMSREGLLKKINFNNIPN-YKYIDKEFR 121
Query: 71 RTR---GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREV 127
+ ++ PY WG + I Y KS + P++ W LW + I M +S R+
Sbjct: 122 NVKYDPTNEYSVPYMWGTLGIVYNKSMVKD----PVDSWDILWNDKYRRNILMFDSVRDT 177
Query: 128 IGSVLKYMGASYNSNN 143
IG LK +G S NS N
Sbjct: 178 IGVSLKRLGFSMNSVN 193
>gi|49480039|ref|YP_035515.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52144048|ref|YP_082781.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus cereus E33L]
gi|118476862|ref|YP_894013.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis str. Al Hakam]
gi|196035369|ref|ZP_03102774.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
W]
gi|196046554|ref|ZP_03113779.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB108]
gi|218902495|ref|YP_002450329.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus AH820]
gi|225863250|ref|YP_002748628.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus cereus 03BB102]
gi|228913957|ref|ZP_04077581.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228926418|ref|ZP_04089490.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228944986|ref|ZP_04107347.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229120927|ref|ZP_04250169.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
95/8201]
gi|229183580|ref|ZP_04310804.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BGSC 6E1]
gi|301052926|ref|YP_003791137.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus biovar anthracis str. CI]
gi|376265229|ref|YP_005117941.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus cereus F837/76]
gi|423552877|ref|ZP_17529204.1| hypothetical protein IGW_03508 [Bacillus cereus ISP3191]
gi|49331595|gb|AAT62241.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51977517|gb|AAU19067.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
E33L]
gi|118416087|gb|ABK84506.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis str. Al Hakam]
gi|195992046|gb|EDX56009.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
W]
gi|196022738|gb|EDX61420.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB108]
gi|218536733|gb|ACK89131.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH820]
gi|225787506|gb|ACO27723.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB102]
gi|228599990|gb|EEK57586.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BGSC 6E1]
gi|228662587|gb|EEL18185.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
95/8201]
gi|228814655|gb|EEM60915.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228833242|gb|EEM78807.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228845679|gb|EEM90706.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|300375095|gb|ADK03999.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
biovar anthracis str. CI]
gi|364511029|gb|AEW54428.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus cereus F837/76]
gi|401185490|gb|EJQ92584.1| hypothetical protein IGW_03508 [Bacillus cereus ISP3191]
Length = 349
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLGMGLKKNG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKDDAQLKTAATDLQKLL 203
>gi|448236906|ref|YP_007400964.1| spermidine/putrescine ABC importer substrate-binding protein
[Geobacillus sp. GHH01]
gi|445205748|gb|AGE21213.1| spermidine/putrescine ABC importer substrate-binding protein
[Geobacillus sp. GHH01]
Length = 357
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + + W DLW P L +I +V+ REV+G L +G
Sbjct: 132 YSVPYFWGTVGIVYNREMLGGKRMT---SWNDLWDPSLRNQILLVDGAREVMGMALNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|422408927|ref|ZP_16485888.1| spermidine/putrescine-binding periplasmic protein 2, partial
[Listeria monocytogenes FSL F2-208]
gi|313609957|gb|EFR85339.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes FSL F2-208]
Length = 312
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|300361323|ref|ZP_07057500.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus gasseri
JV-V03]
gi|300353942|gb|EFJ69813.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus gasseri
JV-V03]
Length = 357
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF K I+ W DLW + I +V+S R+++G L MG
Sbjct: 132 YSVPYFWGTLGIVYN-DKFVKP--GQIKHWNDLWSKDYRHNILLVDSARDIMGLSLASMG 188
Query: 137 ASYN-SNNIDSQVAGGKV 153
S N +N++D ++A K+
Sbjct: 189 KSLNTTNSLDLKLAKTKL 206
>gi|339006887|ref|ZP_08639462.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
laterosporus LMG 15441]
gi|421873293|ref|ZP_16304907.1| bacterial extracellular solute-binding family protein
[Brevibacillus laterosporus GI-9]
gi|338776096|gb|EGP35624.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
laterosporus LMG 15441]
gi|372457619|emb|CCF14456.1| bacterial extracellular solute-binding family protein
[Brevibacillus laterosporus GI-9]
Length = 349
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K K+ P W DLW P+ GR+ ++N RE +G LK G
Sbjct: 127 YSVVYTWGVTGIAYNK----KYVTEPPTSWSDLWNPKYKGRVVVLNDSREALGMSLKKNG 182
Query: 137 AS 138
S
Sbjct: 183 FS 184
>gi|389685729|ref|ZP_10177052.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
O6]
gi|388550071|gb|EIM13341.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
O6]
Length = 364
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGRIS-----MVNSPRE 126
G +AAPY WG I Y K + D AP++ +++ E ++S M+++P E
Sbjct: 121 GNRFAAPYLWGTTGIGYDADKVKALLGDQAPVDSLDLIFKEENLAKLSQCGVAMLDAPSE 180
Query: 127 VIGSVLKYMGASYNSNN 143
+I L Y+G YNS N
Sbjct: 181 IIPIALHYLGLPYNSQN 197
>gi|229016632|ref|ZP_04173570.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1273]
gi|229022847|ref|ZP_04179368.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1272]
gi|228738458|gb|EEL88933.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1272]
gi|228744663|gb|EEL94727.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1273]
Length = 349
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLGMGLKKNG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKEDAQLKTASADLQKLL 203
>gi|423366876|ref|ZP_17344309.1| hypothetical protein IC3_01978 [Bacillus cereus VD142]
gi|401086856|gb|EJP95075.1| hypothetical protein IC3_01978 [Bacillus cereus VD142]
Length = 349
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLGMGLKKNG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKEDAQLKTASADLQKLL 203
>gi|399010093|ref|ZP_10712471.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
gi|398107843|gb|EJL97834.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
Length = 365
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 27/162 (16%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++L K+ + Y DLV LS AI ++P+ D+ L+ +
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIASGALQPL----DKQHLPHLAGVGE 111
Query: 71 RTR--------GKIWAAPYRWGAMMIAYKKSKF--RKHDLAPIEDWKDLWRPELAGR--- 117
R G +A Y WG + Y++ R D AP + W L+ P + +
Sbjct: 112 EFRQHMAVFDPGNRYAGIYAWGTTGVGYQEQAVSQRLAD-APRDSWAMLFDPAVVAKFAD 170
Query: 118 --ISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
+S++N P EV +V+KY+G N N+D K+A QQ
Sbjct: 171 CGVSLLNDPNEVFAAVMKYLGLDINRQNLDDL----KLAEQQ 208
>gi|338997731|ref|ZP_08636423.1| extracellular solute-binding protein [Halomonas sp. TD01]
gi|338765360|gb|EGP20300.1| extracellular solute-binding protein [Halomonas sp. TD01]
Length = 367
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGRIS-------MVNS 123
+G ++ PY WG + Y + + D AP++ W L+ PE+ ++S M++S
Sbjct: 121 KGSEYSVPYMWGTNGLGYNVDRVTEILGDDAPVDSWALLFDPEITKQLSDAGCGLAMLDS 180
Query: 124 PREVIGSVLKYMGASYNSNNIDSQVAGGKV 153
E++ + Y+G S S NI+ AGG++
Sbjct: 181 GDEMLSPAMAYLGLSPLSENIEDLEAGGEL 210
>gi|423420670|ref|ZP_17397759.1| hypothetical protein IE3_04142 [Bacillus cereus BAG3X2-1]
gi|401101237|gb|EJQ09228.1| hypothetical protein IE3_04142 [Bacillus cereus BAG3X2-1]
Length = 349
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLGMGLKKNG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKEDAQLKTASADLQKLL 203
>gi|209525151|ref|ZP_03273694.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|423067797|ref|ZP_17056587.1| putative extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
gi|209494336|gb|EDZ94648.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|406710696|gb|EKD05901.1| putative extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
Length = 360
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY+W + I Y + ++ I W L+ P A R+S+++ R +G+VL
Sbjct: 131 GNQYSIPYQWVTLGIGYNIDRVGEN----INSWSQLFDPNFASRVSLLDDMRHTMGAVLI 186
Query: 134 YMGASYNSNNIDSQVAGGKVAVQ 156
Y+G N+ N + A +Q
Sbjct: 187 YLGYDPNTTNQNEIFAARDFLIQ 209
>gi|343511103|ref|ZP_08748288.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
scophthalmi LMG 19158]
gi|342799450|gb|EGU35016.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
scophthalmi LMG 19158]
Length = 320
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWR--PELAGRISM 120
K S +W++ G +A PY WG++ I Y+K K K P + W++ PELAG I M
Sbjct: 74 KHQSTQWQQACGD-YAIPYFWGSVGIVYRKDKVPK----PPKTWQEFVHPPPELAGHIGM 128
Query: 121 VNSPREVIGSVLKYMGASYNSNNI 144
+N + VL +G + ++ ++
Sbjct: 129 INDTIDTFLPVLNSLGIAPDTEDV 152
>gi|376002510|ref|ZP_09780337.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|375329081|emb|CCE16090.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
Length = 360
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY+W + I Y + ++ I W L+ P A R+S+++ R +G+VL
Sbjct: 131 GNQYSIPYQWVTLGIGYNIDRVGEN----INSWSQLFDPNFASRVSLLDDMRHTMGAVLI 186
Query: 134 YMGASYNSNNIDSQVAGGKVAVQ 156
Y+G N+ N + A +Q
Sbjct: 187 YLGYDPNTTNQNEIFAARDFLIQ 209
>gi|149011623|ref|ZP_01832819.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP19-BS75]
gi|147764054|gb|EDK70986.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP19-BS75]
Length = 356
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+ E I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKSEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|425899095|ref|ZP_18875686.1| extracellular solute-binding protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397890332|gb|EJL06814.1| extracellular solute-binding protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
Length = 365
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 25/161 (15%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++L K+ + Y DLV LS AI ++P+ D+ L+ +
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIASGALQPL----DKQRLPHLAGVGE 111
Query: 71 RTR--------GKIWAAPYRWGAMMIAYKKSKF-RKHDLAPIEDWKDLWRPELAGR---- 117
R G +A Y WG + Y++ ++ AP + W L+ P + +
Sbjct: 112 EFRQHMAVFDPGNRYAGIYAWGTTGVGYQEQAVSQRLAQAPRDSWAMLFDPAVVAKFADC 171
Query: 118 -ISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
+S++N P EV +V+KY+G N N+D K+A QQ
Sbjct: 172 GVSLLNDPNEVFAAVMKYLGLDINRQNLDDL----KLAEQQ 208
>gi|387879776|ref|YP_006310079.1| putrescine ABC transporter [Streptococcus parasanguinis FW213]
gi|386793226|gb|AFJ26261.1| putrescine ABC transporter [Streptococcus parasanguinis FW213]
Length = 356
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEP-----IAGGEDQDWFKCLSHKWKRT 72
+ K+K +Y D+ + ++ +++ L+E I G E+ D K L+ +
Sbjct: 74 YTKIKQGGTTY---DIAIPSEYMIAKMMDEHLVEKLDQSKIKGMENIDP-KLLNQSFDP- 128
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
G ++ PY WG + I Y + AP E W DLWR E I M + REV+G L
Sbjct: 129 -GNQYSVPYFWGTLGIIYNTKMVKN---AP-EHWSDLWREEYRNDIMMYDGAREVMGIGL 183
Query: 133 KYMGASYNSNN 143
+G S N +
Sbjct: 184 NTLGYSLNEKD 194
>gi|419799998|ref|ZP_14325311.1| ABC transporter, solute-binding protein [Streptococcus
parasanguinis F0449]
gi|385696497|gb|EIG26978.1| ABC transporter, solute-binding protein [Streptococcus
parasanguinis F0449]
Length = 356
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEP-----IAGGEDQDWFKCLSHKWKRT 72
+ K+K +Y D+ + ++ +++ L+E I G E+ D K L+ +
Sbjct: 74 YTKIKQGGTTY---DIAIPSEYMIAKMMDEHLVEKLDQSKIKGMENIDP-KLLNQSFDP- 128
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
G ++ PY WG + I Y + AP E W DLWR E I M + REV+G L
Sbjct: 129 -GNQYSVPYFWGTLGIIYNTKMVKN---AP-EHWSDLWREEYRNDIMMYDGAREVMGIGL 183
Query: 133 KYMGASYNSNN 143
+G S N +
Sbjct: 184 NTLGYSLNEKD 194
>gi|170717837|ref|YP_001784897.1| extracellular solute-binding protein [Haemophilus somnus 2336]
gi|168825966|gb|ACA31337.1| extracellular solute-binding protein family 1 [Haemophilus somnus
2336]
Length = 361
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ P GA IA+ ++++ D W DLW+PE AG++ +++ REV L
Sbjct: 134 KGNKYSLPQLLGAPGIAFNTNEYKGSDFT---SWADLWKPEFAGKVQLLDDAREVFNIAL 190
Query: 133 KYMGASYNSNN 143
+G N+ +
Sbjct: 191 LKLGQDPNTQD 201
>gi|125624145|ref|YP_001032628.1| spermidine/putrescine ABC transporter substrate-binding protein
[Lactococcus lactis subsp. cremoris MG1363]
gi|389854499|ref|YP_006356743.1| spermidine/putrescine ABC transporter substrate-binding protein
[Lactococcus lactis subsp. cremoris NZ9000]
gi|124492953|emb|CAL97916.1| Spermidine/putrescine ABC transporter substrate binding
[Lactococcus lactis subsp. cremoris MG1363]
gi|300070921|gb|ADJ60321.1| spermidine/putrescine ABC transporter periplasmic substrate-binding
protein [Lactococcus lactis subsp. cremoris NZ9000]
Length = 355
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------ 71
++KVK +Y DL+ D + IEK E + D K L +
Sbjct: 75 YSKVKQGGTAY---DLIVPSD----YMIEKMAKENLLLKLDHSKIKGLKDDDPKLLNPAF 127
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
+G ++ PY WG + I Y + P + W D+W P I + +S R+V+ V
Sbjct: 128 DQGNQYSVPYFWGTLGIVYNSKTVK----TPPKTWNDIWSPTYKNSILLTDSVRDVMAMV 183
Query: 132 LKYMGASYNSNN 143
L G S N+ N
Sbjct: 184 LSKHGYSLNTTN 195
>gi|217965101|ref|YP_002350779.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes HCC23]
gi|386007529|ref|YP_005925807.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Listeria monocytogenes L99]
gi|386026122|ref|YP_005946898.1| putative spermidine/putrescine uptake ABC transporter, substrate
binding protein [Listeria monocytogenes M7]
gi|217334371|gb|ACK40165.1| ABC transporter spermidine/putrescine binding protein [Listeria
monocytogenes HCC23]
gi|307570339|emb|CAR83518.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Listeria monocytogenes L99]
gi|336022703|gb|AEH91840.1| putative spermidine/putrescine uptake ABC transporter, substrate
binding protein [Listeria monocytogenes M7]
Length = 357
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPNKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|229084376|ref|ZP_04216656.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-44]
gi|228698916|gb|EEL51621.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-44]
Length = 360
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 137 YSLVYTWGVTGIAYNKKYVKE---APTS-WSDLWNEKYKGHVTLLNDSREVLGMGLKKNG 192
Query: 137 ASYNSNNIDSQVAGGKVAVQQNLALL 162
S NS D+Q+ +Q+ L L
Sbjct: 193 FS-NSTKDDAQLKTAATDLQKLLPNL 217
>gi|416029867|ref|ZP_11572224.1| ABC transporter, periplasmic polyamine-binding protein [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422396849|ref|ZP_16476876.1| ABC transporter periplasmic polyamine-binding protein [Pseudomonas
syringae pv. glycinea str. race 4]
gi|320326797|gb|EFW82835.1| ABC transporter, periplasmic polyamine-binding protein [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330882739|gb|EGH16888.1| ABC transporter periplasmic polyamine-binding protein [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 14/146 (9%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++ + +KV A Y D+V L I +++P+ + +W S
Sbjct: 59 FDSAEIMQSKVMAGRTGY---DVVVATSNVLPSLITAGVLQPLDRSQLDNWSHLDSEILA 115
Query: 71 RTR----GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----IS 119
+ G +A PY WG I Y K + D AP+ W +++ E + ++
Sbjct: 116 KVSINDLGNRYAVPYLWGTTGIGYDVDKIKSALGDDAPVNSWDLVFKEENISKLKQCGVA 175
Query: 120 MVNSPREVIGSVLKYMGASYNSNNID 145
M++SP E++ L Y+G +NS D
Sbjct: 176 MLDSPSEIVSIALHYLGLPHNSKKPD 201
>gi|336112957|ref|YP_004567724.1| family 1 extracellular solute-binding protein [Bacillus coagulans
2-6]
gi|335366387|gb|AEH52338.1| extracellular solute-binding protein family 1 [Bacillus coagulans
2-6]
Length = 357
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y S I W DLW P+L +I +V+ REV+G L
Sbjct: 129 GNKYSVPYFWGTVGIVYNSSMLGGKK---ITSWDDLWDPDLKNQILLVDGAREVMGMGLN 185
Query: 134 YMGASYNSNN 143
+ S N N
Sbjct: 186 SLHYSLNDTN 195
>gi|113461303|ref|YP_719372.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
gi|112823346|gb|ABI25435.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
Length = 361
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ P GA IA+ ++++ D W DLW+PE AG++ +++ REV L
Sbjct: 134 KGNKYSLPQLLGAPGIAFNTNEYKGSDFT---SWADLWKPEFAGKVQLLDDAREVFNIAL 190
Query: 133 KYMGASYNSNN 143
+G N+ +
Sbjct: 191 LKLGQDPNTQD 201
>gi|423392318|ref|ZP_17369544.1| hypothetical protein ICG_04166 [Bacillus cereus BAG1X1-3]
gi|401634965|gb|EJS52727.1| hypothetical protein ICG_04166 [Bacillus cereus BAG1X1-3]
Length = 349
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G S N
Sbjct: 130 YTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-N 184
Query: 141 SNNIDSQVAGGKVAVQQNL 159
S D+Q+ +Q+ L
Sbjct: 185 STKEDAQLKTASADLQKLL 203
>gi|385333806|ref|YP_005887757.1| spermidine/putrescine ABC transporter substrate-binding protein
[Marinobacter adhaerens HP15]
gi|311696956|gb|ADP99829.1| spermidine/putrescine ABC transporter periplasmic substrate-binding
protein [Marinobacter adhaerens HP15]
Length = 346
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG +A + P+ W+DLW GR+ + N REV L+ +G
Sbjct: 122 FSVPYLWGTTGLAVDTADIEGE---PVTAWEDLWEDRFDGRVMLTNDMREVFHVGLRVLG 178
Query: 137 ASYNSNNIDS 146
S NS N D
Sbjct: 179 YSGNSTNPDE 188
>gi|168333568|ref|ZP_02691833.1| hypothetical protein Epulo_01721 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 344
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG M I Y + I+ W D+W P+ +I M +S R+ I LK +G
Sbjct: 122 YSVPYSWGTMGIVYNPTMIDGE----IDQWADMWDPKYKNQIFMYDSERDSIMVALKMLG 177
Query: 137 ASYNSNNIDSQVAGGKVAVQQNLALL 162
S N+ ++ + ++Q +L
Sbjct: 178 YSMNTRDLGELEEAKQALIEQKELVL 203
>gi|388545312|ref|ZP_10148595.1| spermidine/putrescine transport system substrate-binding protein
[Pseudomonas sp. M47T1]
gi|388276632|gb|EIK96211.1| spermidine/putrescine transport system substrate-binding protein
[Pseudomonas sp. M47T1]
Length = 360
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 7 IDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLS 66
++ F++L K+ + Y DLV LS AIE IEP+ F +
Sbjct: 50 VEDHFDSLETMETKLLTGGSGY---DLVLSAGQHLSRAIEAGAIEPLDKSA-LPHFAGIG 105
Query: 67 HKWKRTR-----GKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR--- 117
++++ G +A Y WG + Y++ K AP++ W L+ P + +
Sbjct: 106 EEFRQHMAVFDPGNRYAGIYGWGTTGVGYQQEAINKRLPNAPVDSWAMLFDPAVVAKFTD 165
Query: 118 --ISMVNSPREVIGSVLKYMGASYNSNNID 145
+S++N P E+ +V +Y+G N ++D
Sbjct: 166 CGVSLLNDPNELYAAVERYLGLDINKQSLD 195
>gi|16799874|ref|NP_470142.1| hypothetical protein lin0800 [Listeria innocua Clip11262]
gi|16413251|emb|CAC96032.1| lin0800 [Listeria innocua Clip11262]
Length = 357
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|384173017|ref|YP_005554394.1| putrescine/spermidine ABC transporter substrate binding component
[Arcobacter sp. L]
gi|345472627|dbj|BAK74077.1| putrescine/spermidine ABC transporter substrate binding component
[Arcobacter sp. L]
Length = 339
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG+ I+Y S ++ I WK+LW P I + + REV G LK +G
Sbjct: 117 YSIPYLWGSTGISYNTSLVKED----INSWKNLWNPVYKNSILLNDDMREVFGMALKVLG 172
Query: 137 ASYNSNN 143
S NS N
Sbjct: 173 YSANSTN 179
>gi|315281477|ref|ZP_07870095.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
marthii FSL S4-120]
gi|313614877|gb|EFR88403.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
marthii FSL S4-120]
Length = 357
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|398967006|ref|ZP_10681739.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398145178|gb|EJM33973.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 371
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 58 DQDWFKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELA 115
D D L+H G +A PY WG I Y K R D AP++ W +++ E
Sbjct: 115 DNDLLSKLAHN---DPGNQYAVPYLWGTNGIGYNVDKVRAALGDKAPLDSWDLVFKEENL 171
Query: 116 GR-----ISMVNSPREVIGSVLKYMGASYNSNN 143
+ ++M++SP E++ L Y+G NS N
Sbjct: 172 AKLGQCGVAMLDSPSEMLPVALHYLGLPPNSTN 204
>gi|419955798|ref|ZP_14471920.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
gi|387967394|gb|EIK51697.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
Length = 365
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKW 69
+F++ + K+ A S+ Y D+V +P+L+ I+ + + + + +W
Sbjct: 57 VFDSNEVLEAKLLAGSSGY---DVVVPSNPFLAKQIKAGVFQKLDKSKLSNWDNLDKSLL 113
Query: 70 KRTR----GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPE-----LAGRI 118
K G +A PY WG + I Y K + D AP++ W +++PE A +
Sbjct: 114 KALEPSDPGNQYAIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKACGV 173
Query: 119 SMVNSPREVIGSVLKYMGASYNSN 142
S ++SP E++ + L Y+G + +S+
Sbjct: 174 SFLDSPTEILPAALHYLGYAPDSD 197
>gi|423099912|ref|ZP_17087619.1| ABC transporter, solute-binding protein [Listeria innocua ATCC
33091]
gi|370793645|gb|EHN61478.1| ABC transporter, solute-binding protein [Listeria innocua ATCC
33091]
Length = 357
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|319652982|ref|ZP_08007087.1| spermidine/putrescine ABC transporter [Bacillus sp. 2_A_57_CT2]
gi|317395331|gb|EFV76064.1| spermidine/putrescine ABC transporter [Bacillus sp. 2_A_57_CT2]
Length = 357
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y I W DLW PEL +I +++ REV+G L
Sbjct: 129 GNEYSIPYFWGTVGILYNTDILGD---KKITSWNDLWDPELKNQILLIDGAREVMGMGLN 185
Query: 134 YMGASYNSNNIDSQV 148
+ S N N D V
Sbjct: 186 SLHYSLNDKNRDHLV 200
>gi|47093931|ref|ZP_00231669.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 4b H7858]
gi|417314873|ref|ZP_12101566.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1816]
gi|422412245|ref|ZP_16489204.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
innocua FSL S4-378]
gi|422415289|ref|ZP_16492246.1| spermidine/putrescine-binding periplasmic protein PotD [Listeria
innocua FSL J1-023]
gi|422808896|ref|ZP_16857307.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Listeria monocytogenes FSL J1-208]
gi|47017691|gb|EAL08486.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 4b H7858]
gi|313619899|gb|EFR91458.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
innocua FSL S4-378]
gi|313624594|gb|EFR94576.1| spermidine/putrescine-binding periplasmic protein PotD [Listeria
innocua FSL J1-023]
gi|328467360|gb|EGF38440.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1816]
gi|378752510|gb|EHY63095.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Listeria monocytogenes FSL J1-208]
Length = 357
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|290893772|ref|ZP_06556752.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J2-071]
gi|404407260|ref|YP_006689975.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2376]
gi|290556721|gb|EFD90255.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J2-071]
gi|404241409|emb|CBY62809.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2376]
Length = 357
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKQMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|16802852|ref|NP_464337.1| hypothetical protein lmo0810 [Listeria monocytogenes EGD-e]
gi|46907040|ref|YP_013429.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes serotype 4b str. F2365]
gi|47094815|ref|ZP_00232429.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 1/2a F6854]
gi|226223427|ref|YP_002757534.1| spermidine/putrescine-binding protein [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254823923|ref|ZP_05228924.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J1-194]
gi|254828893|ref|ZP_05233580.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
N3-165]
gi|254853773|ref|ZP_05243121.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-503]
gi|254911493|ref|ZP_05261505.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J2818]
gi|254931190|ref|ZP_05264549.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
HPB2262]
gi|254935819|ref|ZP_05267516.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
F6900]
gi|284801140|ref|YP_003413005.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578]
gi|284994282|ref|YP_003416050.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923]
gi|300765116|ref|ZP_07075103.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes FSL N1-017]
gi|386043137|ref|YP_005961942.1| spermidine/putrescine transport system substrate-binding protein
[Listeria monocytogenes 10403S]
gi|386046472|ref|YP_005964804.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J0161]
gi|386049737|ref|YP_005967728.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-561]
gi|386053073|ref|YP_005970631.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
Finland 1998]
gi|386731563|ref|YP_006205059.1| extracellular solute-binding protein [Listeria monocytogenes
07PF0776]
gi|404280362|ref|YP_006681260.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2755]
gi|404283250|ref|YP_006684147.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2372]
gi|404286220|ref|YP_006692806.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes serotype 7 str. SLCC2482]
gi|404410049|ref|YP_006695637.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC5850]
gi|404412893|ref|YP_006698480.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC7179]
gi|405749162|ref|YP_006672628.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes ATCC 19117]
gi|405752027|ref|YP_006675492.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2378]
gi|405754888|ref|YP_006678352.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2540]
gi|405757805|ref|YP_006687081.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2479]
gi|406703584|ref|YP_006753938.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes L312]
gi|417317055|ref|ZP_12103681.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1-220]
gi|424713687|ref|YP_007014402.1| Spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes serotype 4b str. LL195]
gi|424822534|ref|ZP_18247547.1| periplasmic protein (SPBP) [Listeria monocytogenes str. Scott A]
gi|16410199|emb|CAC98888.1| lmo0810 [Listeria monocytogenes EGD-e]
gi|46880306|gb|AAT03606.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|47016697|gb|EAL07616.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 1/2a F6854]
gi|225875889|emb|CAS04593.1| Putative spermidine/putrescine-binding protein [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258601306|gb|EEW14631.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
N3-165]
gi|258607153|gb|EEW19761.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-503]
gi|258608406|gb|EEW21014.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
F6900]
gi|284056702|gb|ADB67643.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578]
gi|284059749|gb|ADB70688.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923]
gi|293582738|gb|EFF94770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
HPB2262]
gi|293589436|gb|EFF97770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J2818]
gi|293593149|gb|EFG00910.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J1-194]
gi|300514241|gb|EFK41301.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes FSL N1-017]
gi|328475514|gb|EGF46273.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1-220]
gi|332311214|gb|EGJ24309.1| periplasmic protein (SPBP) [Listeria monocytogenes str. Scott A]
gi|345533463|gb|AEO02904.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J0161]
gi|345536371|gb|AEO05811.1| spermidine/putrescine transport system substrate-binding protein
[Listeria monocytogenes 10403S]
gi|346423583|gb|AEO25108.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-561]
gi|346645724|gb|AEO38349.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
Finland 1998]
gi|384390321|gb|AFH79391.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes 07PF0776]
gi|404218362|emb|CBY69726.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes ATCC 19117]
gi|404221227|emb|CBY72590.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2378]
gi|404224088|emb|CBY75450.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2540]
gi|404226997|emb|CBY48402.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2755]
gi|404229875|emb|CBY51279.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC5850]
gi|404232752|emb|CBY54155.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2372]
gi|404235687|emb|CBY57089.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2479]
gi|404238592|emb|CBY59993.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC7179]
gi|404245149|emb|CBY03374.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes serotype 7 str. SLCC2482]
gi|406360614|emb|CBY66887.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes L312]
gi|424012871|emb|CCO63411.1| Spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes serotype 4b str. LL195]
Length = 357
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|411011630|ref|ZP_11387959.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Aeromonas aquariorum AAK1]
gi|423198745|ref|ZP_17185328.1| hypothetical protein HMPREF1171_03360 [Aeromonas hydrophila SSU]
gi|404629935|gb|EKB26660.1| hypothetical protein HMPREF1171_03360 [Aeromonas hydrophila SSU]
Length = 365
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKW 69
+F++ + K+ A S+ Y D+V +P+L+ I+ + + + + +W +
Sbjct: 57 VFDSNEVLEAKLLAGSSGY---DIVVPSNPFLAKQIKAGVFQKLDKSKLSNWQNLDTSLL 113
Query: 70 KRTR----GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----I 118
K G ++ PY WG + AY K + D AP++ W +++PE + +
Sbjct: 114 KALEPSDPGNQYSIPYLWGTIGYAYNPEKVKAVLGDKAPVDSWDLVFKPENMAKLKECGV 173
Query: 119 SMVNSPREVIGSVLKYMGASYNSNNID 145
S ++SP E++ + L+Y+G +S D
Sbjct: 174 SFLDSPTEMLPAALQYLGFKPDSQKPD 200
>gi|320546885|ref|ZP_08041188.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus equinus ATCC
9812]
gi|320448480|gb|EFW89220.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus equinus ATCC
9812]
Length = 357
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + AP E W DLW+ E A I +V+ RE +G L +G
Sbjct: 133 YSVPYFWGTLGIVYNDTMVAN---AP-EHWSDLWKSEYANNIMLVDGAREAMGIGLGTLG 188
Query: 137 ASYNSNNIDSQVAGGK 152
S N+ ++ A K
Sbjct: 189 YSLNTKSLTELDAASK 204
>gi|241889938|ref|ZP_04777236.1| spermidine/putrescine-binding periplasmic protein PotD [Gemella
haemolysans ATCC 10379]
gi|241863560|gb|EER67944.1| spermidine/putrescine-binding periplasmic protein PotD [Gemella
haemolysans ATCC 10379]
Length = 359
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K+K DL E W DLW L I +++ RE++G L+ G
Sbjct: 131 YSIPYFWGTLGILYDKTKV-PEDLK-FEKWNDLWDARLENNILLIDGAREMMGIALQSEG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 NSVNDTN 195
>gi|395651651|ref|ZP_10439501.1| putrescine/polyamine-binding periplasmic protein [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 363
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWF----KCLSHKWKRTRGKIWAAPYRWGAMM 87
D+V + +L+ IE + +P+ + +W K + G +A PY +G ++
Sbjct: 74 DVVVPSNVFLAKQIEAGVFQPLDRSQLPNWNHLDPKLMKLIEANDPGNKFAVPYMYGTIL 133
Query: 88 IAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 140
I + +K + D AP++ W +++ E + +++++SP E++ L+++G N
Sbjct: 134 IGFNPAKVKAALGDNAPVDSWDLIFKEENISKLKQCGVALLDSPSEILPLALQHLGLDPN 193
Query: 141 SNN 143
SNN
Sbjct: 194 SNN 196
>gi|385830706|ref|YP_005868519.1| spermidine/putrescine transport system substrate-binding protein
[Lactococcus lactis subsp. lactis CV56]
gi|418038924|ref|ZP_12677239.1| hypothetical protein LLCRE1631_02046 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|326406714|gb|ADZ63785.1| spermidine/putrescine transport system substrate-binding protein
[Lactococcus lactis subsp. lactis CV56]
gi|354692780|gb|EHE92588.1| hypothetical protein LLCRE1631_02046 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 355
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLS-FAIEKRLIE----PIAGGEDQDWFKCLSHKWKRT 72
++KVK +Y DL+ D + A E LI+ I G +D D K L+ + +
Sbjct: 75 YSKVKQGGTAY---DLIVPSDYMIEKMAKENLLIKLDHSKIKGLKDDDP-KLLNPAFDQ- 129
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
G ++ PY WG + I Y + P + W D+W P I + +S R+V+ VL
Sbjct: 130 -GNQYSVPYFWGTLGIVYNSKTVTR----PPKTWNDIWSPTYKNSILLTDSVRDVMAMVL 184
Query: 133 KYMGASYNSNN 143
G S N+ N
Sbjct: 185 SKHGYSLNTTN 195
>gi|313889189|ref|ZP_07822843.1| ABC transporter, solute-binding protein [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312844743|gb|EFR32150.1| ABC transporter, solute-binding protein [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 289
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I + K++ + ++ W LW + +I M NS R+ +G LK +G
Sbjct: 127 YSVPYFWGTVGIVFNKAEVKDK----VDSWDILWNEKYKNQIIMYNSQRDTLGVALKRLG 182
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS N K ++Q
Sbjct: 183 YSLNSTNEKELQEAKKSLIEQ 203
>gi|168185699|ref|ZP_02620334.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum C str. Eklund]
gi|169296261|gb|EDS78394.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum C str. Eklund]
Length = 347
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 18/141 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW------FKCLSHKWKR 71
+ K+K Y D+V D ++ I + ++E I ++ FK L+ K
Sbjct: 68 YVKIKKGGTDY---DVVVPSDYMITKMINENMLEKIDMSNVPNYKDIPSKFKNLAFDPKN 124
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y + + I+ W LW P+ +I MV+S R+ I
Sbjct: 125 E----YSVPYMWGTVGIIYNTKLIKDN----IDSWDALWNPKYKEQILMVDSQRDAIAVA 176
Query: 132 LKYMGASYNSNNIDSQVAGGK 152
LK +G S N+ N SQ+ K
Sbjct: 177 LKRLGYSMNTTN-KSQLEKAK 196
>gi|254993330|ref|ZP_05275520.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL
J2-064]
Length = 357
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|322515385|ref|ZP_08068379.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Actinobacillus ureae ATCC
25976]
gi|322118612|gb|EFX90840.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Actinobacillus ureae ATCC
25976]
Length = 349
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY +G I F D + I W DLWR E G++ M+N PREV L G
Sbjct: 126 YSLPYVYGLTGIGVNSQDF---DPSTISSWGDLWRDEYKGKLLMMNDPREVFHIALLLDG 182
Query: 137 ASYNSNN 143
S NS N
Sbjct: 183 KSPNSEN 189
>gi|116512021|ref|YP_809237.1| spermidine/putrescine-binding periplasmic protein [Lactococcus
lactis subsp. cremoris SK11]
gi|116107675|gb|ABJ72815.1| Spermidine/putrescine-binding periplasmic protein [Lactococcus
lactis subsp. cremoris SK11]
Length = 355
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 17/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------ 71
++KVK +Y DL+ D + IEK E + D K L +
Sbjct: 75 YSKVKQGGTAY---DLIVPSD----YMIEKMAKENLLLKLDHSKIKGLKDDDPKLLNPAF 127
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
+G ++ PY WG + I Y + P + W D+W P I + +S R+V+ V
Sbjct: 128 DQGNQYSVPYFWGTLGIVYNSKTVK----TPPKTWNDIWSPTYKNSILLTDSVRDVMAMV 183
Query: 132 LKYMGASYNSNN 143
L G S N+ N
Sbjct: 184 LSKHGYSLNTTN 195
>gi|15673148|ref|NP_267322.1| spermidine/putrescine ABC transporter substrate binding protein
[Lactococcus lactis subsp. lactis Il1403]
gi|12724130|gb|AAK05264.1|AE006348_9 spermidine/putrescine ABC transporter substrate binding protein
[Lactococcus lactis subsp. lactis Il1403]
Length = 355
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLS-FAIEKRLIE----PIAGGEDQDWFKCLSHKWKRT 72
++KVK +Y DL+ D + A E LI+ I G +D D K L+ + +
Sbjct: 75 YSKVKQGGTAY---DLIVPSDYMIEKMAKENLLIKLDHSKIKGLKDDDP-KLLNPAFDQ- 129
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
G ++ PY WG + I Y + P + W D+W P I + +S R+V+ VL
Sbjct: 130 -GNQYSVPYFWGTLGIVYNSKTVTR----PPKTWNDIWSPTYKNSILLTDSVRDVMAMVL 184
Query: 133 KYMGASYNSNN 143
G S N+ N
Sbjct: 185 SKHGYSLNTTN 195
>gi|281491662|ref|YP_003353642.1| spermidine/putrescine ABC transporter substrate-binding protein
[Lactococcus lactis subsp. lactis KF147]
gi|281375380|gb|ADA64893.1| Spermidine/putrescine ABC transporter, substrate-binding protein
PotD [Lactococcus lactis subsp. lactis KF147]
Length = 355
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLS-FAIEKRLIE----PIAGGEDQDWFKCLSHKWKRT 72
++KVK +Y DL+ D + A E LI+ I G +D D K L+ + +
Sbjct: 75 YSKVKQGGTAY---DLIVPSDYMIEKMAKENLLIKLDHSKIKGLKDDDP-KLLNPAFDQ- 129
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
G ++ PY WG + I Y + P + W D+W P I + +S R+V+ VL
Sbjct: 130 -GNQYSVPYFWGTLGIVYNSKTVTR----PPKTWNDIWSPTYKNSILLTDSVRDVMAMVL 184
Query: 133 KYMGASYNSNN 143
G S N+ N
Sbjct: 185 SKHGYSLNTTN 195
>gi|398954833|ref|ZP_10676158.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398151931|gb|EJM40464.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 366
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 70 KRTRGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPE-----LAGRISMVN 122
K G + PY +G ++I + +K + + AP++ W +++PE A ++M++
Sbjct: 119 KNDPGNQYGVPYMYGTVLIGFNPAKVKAALGENAPVDSWDLVFKPENMEKLKACGVAMLD 178
Query: 123 SPREVIGSVLKYMGASYNSNNID 145
SP E++ L Y+G NS N D
Sbjct: 179 SPSEILPLALHYLGLDPNSQNPD 201
>gi|343514763|ref|ZP_08751831.1| hypothetical protein VIBRN418_00190 [Vibrio sp. N418]
gi|342799500|gb|EGU35064.1| hypothetical protein VIBRN418_00190 [Vibrio sp. N418]
Length = 320
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWR--PELAGRISM 120
K S +W++ G +A PY WG++ I Y+K K K P + W++ PELAG I M
Sbjct: 74 KHQSTQWQQACGN-YAIPYFWGSVGIVYRKDKVPK----PPQTWQEFVHPPPELAGHIGM 128
Query: 121 VNSPREVIGSVLKYMGASYNSNN 143
+N + VL +G + ++ +
Sbjct: 129 INDTIDTFLPVLNSLGIAPDTED 151
>gi|116629918|ref|YP_815090.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
gasseri ATCC 33323]
gi|238853263|ref|ZP_04643648.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
gasseri 202-4]
gi|311110447|ref|ZP_07711844.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Lactobacillus
gasseri MV-22]
gi|420148486|ref|ZP_14655754.1| Spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus gasseri CECT
5714]
gi|116095500|gb|ABJ60652.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
gasseri ATCC 33323]
gi|238834147|gb|EEQ26399.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
gasseri 202-4]
gi|311065601|gb|EFQ45941.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Lactobacillus
gasseri MV-22]
gi|398400038|gb|EJN53634.1| Spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus gasseri CECT
5714]
Length = 357
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF K I+ W DLW + I +V+S R+++G L MG
Sbjct: 132 YSVPYFWGTLGIVYN-DKFVKP--GQIKHWNDLWSKKYRHNILLVDSARDIMGLSLASMG 188
Query: 137 ASYN-SNNIDSQVAGGKV 153
S N +N++D ++A K+
Sbjct: 189 KSLNTTNSLDLKLAKTKL 206
>gi|331268532|ref|YP_004395024.1| extracellular solute-binding protein [Clostridium botulinum
BKT015925]
gi|329125082|gb|AEB75027.1| Bacterial extracellular solute-binding protein, putative
[Clostridium botulinum BKT015925]
Length = 347
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + I+ W LW P+ +I MV+S R+ I LK +G
Sbjct: 126 YSVPYMWGTVGIIYNTKLIKDK----IDSWDALWNPKYKDQILMVDSQRDAIAVALKKLG 181
Query: 137 ASYNSNNIDS 146
S N+ N D
Sbjct: 182 YSINTRNKDE 191
>gi|407693810|ref|YP_006818599.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus suis H91-0380]
gi|407389867|gb|AFU20360.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus suis H91-0380]
Length = 349
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY +G I F D + I W DLWR E G++ M+N PREV L G
Sbjct: 126 YSLPYVYGLTGIGVNSQDF---DPSTISSWGDLWRDEYKGKLLMMNDPREVFHIALLLDG 182
Query: 137 ASYNSNN 143
S NS N
Sbjct: 183 KSPNSEN 189
>gi|423697050|ref|ZP_17671540.1| periplasmic putrescine-binding protein [Pseudomonas fluorescens
Q8r1-96]
gi|388003947|gb|EIK65274.1| periplasmic putrescine-binding protein [Pseudomonas fluorescens
Q8r1-96]
Length = 367
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +A PY WG I Y K R D AP+ W +++ E + ++M++SP E
Sbjct: 124 GNRYAVPYLWGTTGIGYDVDKVRVALGDSAPVNSWDLIFKEENISKLQSCGVAMLDSPSE 183
Query: 127 VIGSVLKYMGASYNSNN 143
+I L Y+G NS N
Sbjct: 184 IISIALNYLGLPSNSKN 200
>gi|440780808|ref|ZP_20959279.1| spermidine/putrescine ABC transporter periplasmic protein
[Clostridium pasteurianum DSM 525]
gi|440221396|gb|ELP60601.1| spermidine/putrescine ABC transporter periplasmic protein
[Clostridium pasteurianum DSM 525]
Length = 360
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY G MI Y K +K I KDLW P L +++ PR VIG L +G
Sbjct: 139 YSIPYTLGGQMIVYNPDKVKKD----INGIKDLWDPSLKDSAVLLDDPRSVIGMALTKLG 194
Query: 137 ASYNSNN 143
S N +
Sbjct: 195 YSINETD 201
>gi|398874755|ref|ZP_10629957.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398194246|gb|EJM81325.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 366
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 70 KRTRGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPE-----LAGRISMVN 122
K G + PY +G ++I + +K + + AP++ W +++PE A ++M++
Sbjct: 119 KNDPGNQYGVPYMYGTVLIGFNPAKVKAALGENAPVDSWDLVFKPENMEKLKACGVAMLD 178
Query: 123 SPREVIGSVLKYMGASYNSNNID 145
SP E++ L Y+G NS N D
Sbjct: 179 SPSEILPLALHYLGLDPNSQNPD 201
>gi|212640642|ref|YP_002317162.1| Spermidine/putrescine transport system substrate-binding protein
[Anoxybacillus flavithermus WK1]
gi|212562122|gb|ACJ35177.1| Spermidine/putrescine transport system substrate-binding protein
[Anoxybacillus flavithermus WK1]
Length = 357
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY WG + I Y ++ + I W DLW P I + + RE+IG L
Sbjct: 128 RGNQYSIPYFWGTVGIVYNRALLGGKE---ITSWNDLWDPAFKNEILLADGAREIIGMAL 184
Query: 133 KYMGASYNSNN 143
+ S N N
Sbjct: 185 NSLHYSLNDTN 195
>gi|423609801|ref|ZP_17585662.1| hypothetical protein IIM_00516 [Bacillus cereus VD107]
gi|401250283|gb|EJR56584.1| hypothetical protein IIM_00516 [Bacillus cereus VD107]
Length = 349
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G S N
Sbjct: 130 YTWGVTGIAYNKKYVKE---APTS-WADLWNDKYKGHVTLLNDSREVLGMGLKKNGFS-N 184
Query: 141 SNNIDSQVAGGKVAVQQNLALL 162
S D+Q+ +Q+ L L
Sbjct: 185 STKDDAQLKTAATDLQKLLPNL 206
>gi|330809387|ref|YP_004353849.1| putrescine-binding periplasmic protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327377495|gb|AEA68845.1| putative putrescine-binding periplasmic protein precursor
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 367
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +A PY WG I Y K R D AP+ W +++ E + ++M++SP E
Sbjct: 124 GNRYAVPYLWGTTGIGYDVDKVRVALGDSAPVNSWDLIFKEENISKLQSCGVAMLDSPSE 183
Query: 127 VIGSVLKYMGASYNSNN 143
+I L Y+G NS N
Sbjct: 184 IISIALNYLGLPSNSKN 200
>gi|117617823|ref|YP_858561.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559230|gb|ABK36178.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 365
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKW 69
+F++ + K+ A S+ Y D+V +P+L+ I+ + + + + +W +
Sbjct: 57 VFDSNEVLEAKLLAGSSGY---DIVVPSNPFLAKQIKAGVFQKLDKSKLSNWQNLDTSLL 113
Query: 70 KRTR----GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----I 118
K G ++ PY WG + AY K + D AP++ W +++PE + +
Sbjct: 114 KALEPSDPGNQYSIPYLWGTIGYAYNPEKVKAVLGDKAPVDSWDLVFKPENMAKLKECGV 173
Query: 119 SMVNSPREVIGSVLKYMGASYNSNNID 145
S ++SP E++ + L+Y+G +S D
Sbjct: 174 SFLDSPTEMLPAALQYLGFKPDSQKPD 200
>gi|398921870|ref|ZP_10660034.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398164240|gb|EJM52383.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 366
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 70 KRTRGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPE-----LAGRISMVN 122
K G + PY +G ++I + +K + + AP++ W +++PE A ++M++
Sbjct: 119 KNDPGNQYGVPYMYGTVLIGFNPAKVKAALGENAPVDSWDLVFKPENMEKLKACGVAMLD 178
Query: 123 SPREVIGSVLKYMGASYNSNNID 145
SP E++ L Y+G NS N D
Sbjct: 179 SPSEILPLALHYLGLDPNSQNPD 201
>gi|386288729|ref|ZP_10065869.1| polyamine ABC transporter [gamma proteobacterium BDW918]
gi|385278284|gb|EIF42256.1| polyamine ABC transporter [gamma proteobacterium BDW918]
Length = 352
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----ELAGRISMVNSPREVIG 129
G +++ PY + +I Y ++K + + P DW ++ P ++ G++++++ E+ G
Sbjct: 114 GNVYSLPYAFTTTLIGYNENKITELGIDP-ADWSIIFDPAVLAKIKGKVTVMDDAEELFG 172
Query: 130 SVLKYMGASYNSNN 143
+ LKY+G S N N
Sbjct: 173 AALKYLGYSINDTN 186
>gi|255029864|ref|ZP_05301815.1| spermidine/putrescine-binding protein [Listeria monocytogenes LO28]
Length = 296
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ PEL +I +++ REV+G L +G
Sbjct: 71 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 127
Query: 137 ASYNSNN 143
S N N
Sbjct: 128 YSLNDTN 134
>gi|426410137|ref|YP_007030236.1| putrescine ABC transporter periplasmic protein [Pseudomonas sp.
UW4]
gi|426268354|gb|AFY20431.1| putrescine ABC transporter periplasmic protein [Pseudomonas sp.
UW4]
Length = 366
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 70 KRTRGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPE-----LAGRISMVN 122
K G + PY +G ++I + +K + + AP++ W +++PE A ++M++
Sbjct: 119 KNDPGNQYGVPYMYGTVLIGFNPAKVKAALGENAPVDSWDLVFKPENMEKLKACGVAMLD 178
Query: 123 SPREVIGSVLKYMGASYNSNNID 145
SP E++ L Y+G NS N D
Sbjct: 179 SPSEILPLALHYLGLDPNSQNPD 201
>gi|110803710|ref|YP_699248.1| spermidine/putrescine-binding periplasmic protein precursor
[Clostridium perfringens SM101]
gi|110684211|gb|ABG87581.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens SM101]
Length = 360
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K P++ W LW P+ ++ M +S R+ + K +G
Sbjct: 135 YSVPYMWGTVGIIYNTKKVSD----PVDSWNILWNPKYKDQVIMPDSVRDAMAVAEKKLG 190
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S N+ N+D A K + Q
Sbjct: 191 YSLNTENLDQIEAAKKELMTQ 211
>gi|452878560|ref|ZP_21955758.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa VRFPA01]
gi|452184784|gb|EME11802.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa VRFPA01]
Length = 367
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGRIS-----MVNSPRE 126
G +A PY WG IAY K R AP++ W +++ E R+S ++SP E
Sbjct: 124 GNRYAVPYLWGTTGIAYDVDKVRTLLGPDAPVDSWDLIFKEENISRLSQCGVATLDSPTE 183
Query: 127 VIGSVLKYMGASYNSNN 143
++ L Y+G +NS N
Sbjct: 184 LVSIALNYLGLPHNSRN 200
>gi|350566582|ref|ZP_08935238.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Peptoniphilus indolicus
ATCC 29427]
gi|348662567|gb|EGY79226.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Peptoniphilus indolicus
ATCC 29427]
Length = 347
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY G + I Y K+ K PI W DLW G+I M +S R+ I L +G
Sbjct: 122 YSIPYFSGTLGIVYNKTMVAK----PITSWADLWDVTNKGQIIMYDSQRDSIAVALAKLG 177
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S NS N + A K + Q
Sbjct: 178 YSLNSTNPEELQAAKKALIDQ 198
>gi|427723684|ref|YP_007070961.1| extracellular solute-binding protein [Leptolyngbya sp. PCC 7376]
gi|427355404|gb|AFY38127.1| extracellular solute-binding protein family 1 [Leptolyngbya sp. PCC
7376]
Length = 386
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWR--PELAGRISMVNSPREVIGSV 131
G ++ P WG + Y KS D AP DW LW +L R++++N REV+G+
Sbjct: 159 GNSYSIPISWGTTGLIYNKSAL---DEAPT-DWNYLWDNADKLQRRMTLLNDVREVLGAS 214
Query: 132 LKYMGASYNSN 142
LK +G SYNS
Sbjct: 215 LKSLGYSYNST 225
>gi|427716541|ref|YP_007064535.1| extracellular solute-binding protein [Calothrix sp. PCC 7507]
gi|427348977|gb|AFY31701.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
7507]
Length = 361
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWR--PELAGRISMVNSPREVIGSVLKY 134
++ P+ WG + Y + AP EDW LW+ +L R++++N REV+G+ L+
Sbjct: 138 YSIPFNWGTTGLLYNSEIIKN---AP-EDWDYLWQNQTQLHKRMTLLNDVREVMGATLRM 193
Query: 135 MGASYNSNN 143
+G SYNS +
Sbjct: 194 LGYSYNSKD 202
>gi|398868042|ref|ZP_10623468.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398234612|gb|EJN20475.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 365
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 23/160 (14%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIE-------PIAGGEDQDWFK 63
F++L K+ + Y DLV LS AI+ I+ P G +++ +
Sbjct: 59 FDSLETVETKLLTGRSGY---DLVLTAGQHLSRAIQSGAIQTVDKQRIPHFAGVGEEFRQ 115
Query: 64 CLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDL-APIEDWKDLWRPELAGR----- 117
H G A Y WG + Y++ ++ AP W L+ P + R
Sbjct: 116 ---HMAVFDPGNRHAGIYAWGTTGVGYQEEAVKQRLADAPTNSWAMLFDPAVVSRFADCG 172
Query: 118 ISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
+S++N P EV +V+KYMG N ++D K+A QQ
Sbjct: 173 VSLLNDPNEVFAAVMKYMGLDINRQSLDDL----KLAEQQ 208
>gi|379795473|ref|YP_005325471.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|356872463|emb|CCE58802.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus MSHR1132]
Length = 357
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNETF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N +N
Sbjct: 185 NKLGYNLNDSN 195
>gi|312865132|ref|ZP_07725360.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus downei F0415]
gi|311099243|gb|EFQ57459.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus downei F0415]
Length = 357
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 43 FAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRGKI------WAAPYRWGAMMIAYKKSKFR 96
+ I+K E + D+ K L + + GK ++ PY WG + I Y S +
Sbjct: 93 YMIDKMRQEKLLVKLDKSQLKGLGNLGSQFLGKSFDPKNDYSIPYFWGTVGIVYNDSVVK 152
Query: 97 KHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
P + W DLW + I +V+ REV+G L +G S NS N
Sbjct: 153 N----PPQHWSDLWNSDYKDSIMLVDGAREVMGLGLNSLGYSLNSKN 195
>gi|421835972|ref|ZP_16270582.1| spermidine/putrescine ABC transporter
permease/spermidine/putrescine-binding protein, partial
[Clostridium botulinum CFSAN001627]
gi|409742252|gb|EKN41730.1| spermidine/putrescine ABC transporter
permease/spermidine/putrescine-binding protein, partial
[Clostridium botulinum CFSAN001627]
Length = 329
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRG------KIWAAPYRWGA 85
DLV D + +++LI+PI D++ L++ K ++ PY WG
Sbjct: 59 DLVVTSDYAIEIMTKQKLIQPI----DKNNVPNLANIDKNVLDLAFDPKNTYSLPYMWGG 114
Query: 86 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
I K+K K I + DLW E + +++ PR +IG L+ G S NS N
Sbjct: 115 NNIVIDKTKITKK----ITSFDDLWDSEFKNSMVILDDPRVMIGLALQKNGYSINSKN 168
>gi|256829625|ref|YP_003158353.1| family 1 extracellular solute-binding protein [Desulfomicrobium
baculatum DSM 4028]
gi|256578801|gb|ACU89937.1| extracellular solute-binding protein family 1 [Desulfomicrobium
baculatum DSM 4028]
Length = 342
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG+ IA + A + + DLW+PEL G+I + N R V+G LK +G
Sbjct: 120 YSVPYMWGSTAIAVNTTNPVA---AAVTSYADLWKPELKGKILLPNDMRGVLGMGLKRLG 176
Query: 137 ASYNSNN 143
S N +
Sbjct: 177 YSLNETD 183
>gi|152989682|ref|YP_001347970.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PA7]
gi|150964840|gb|ABR86865.1| probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PA7]
Length = 367
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGRIS-----MVNSPRE 126
G +A PY WG IAY K R AP++ W +++ E R+S ++SP E
Sbjct: 124 GNRYAVPYLWGTTGIAYDVDKVRTLLGPDAPVDSWDLIFKEENISRLSQCGVATLDSPTE 183
Query: 127 VIGSVLKYMGASYNSNN 143
++ L Y+G +NS N
Sbjct: 184 LVSIALNYLGLPHNSRN 200
>gi|420155856|ref|ZP_14662709.1| ABC transporter, solute-binding protein [Clostridium sp. MSTE9]
gi|394758400|gb|EJF41294.1| ABC transporter, solute-binding protein [Clostridium sp. MSTE9]
Length = 397
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 19/133 (14%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIE-------PIAGGEDQDWFKCLSHKWK 70
+ K+ + A+Y D++ D +S I++ L++ P + DQD+ K +
Sbjct: 81 YAKLVSGGANY---DVIIPSDYMISKLIKENLVQKLDYQNIPNSKYIDQDFLKPVYDPTN 137
Query: 71 RTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGS 130
++ PY WG + I Y K ++ ++ W LW + AG+I M ++PR+ G
Sbjct: 138 E-----YSVPYTWGVVGIFYNKKYVKEA----VDSWDILWDEKYAGKILMFDNPRDAFGI 188
Query: 131 VLKYMGASYNSNN 143
K + S+NS +
Sbjct: 189 AQKRLDFSFNSTD 201
>gi|374673176|dbj|BAL51067.1| spermidine/putrescine ABC transporter substrate binding protein
[Lactococcus lactis subsp. lactis IO-1]
Length = 331
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLS-FAIEKRLIE----PIAGGEDQDWFKCLSHKWKRT 72
++KVK +Y DL+ D + A E LI+ I G +D D K L+ + +
Sbjct: 51 YSKVKQGGTAY---DLIVPSDYMIEKMAKENLLIKLDHSKIKGLKDDDP-KLLNPAFDQ- 105
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
G ++ PY WG + I Y + P + W D+W P I + +S R+V+ VL
Sbjct: 106 -GNQYSVPYFWGTLGIVYNSKTVTR----PPKTWNDIWSPTYKNSILLTDSVRDVMAMVL 160
Query: 133 KYMGASYNSNN 143
G S N+ N
Sbjct: 161 SKHGYSLNTTN 171
>gi|291569032|dbj|BAI91304.1| putative polyamine ABC transporter substrate-binding protein
[Arthrospira platensis NIES-39]
Length = 360
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY+W + I Y + ++ I W L+ P+ A ++S+++ R +G+VL
Sbjct: 131 GNQYSIPYQWVTLGIGYNIDRVGEN----INSWSQLFDPDFASKVSLLDDMRHTMGAVLI 186
Query: 134 YMGASYNSNNIDSQVAGGKVAVQ 156
Y+G N+ N + A +Q
Sbjct: 187 YLGYDPNTTNQNEIFAARDFLIQ 209
>gi|388471666|ref|ZP_10145875.1| periplasmic putrescine-binding protein [Pseudomonas synxantha
BG33R]
gi|388008363|gb|EIK69629.1| periplasmic putrescine-binding protein [Pseudomonas synxantha
BG33R]
Length = 367
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +A PY WG I Y K + D AP++ W +++ E + ++M++SP E
Sbjct: 124 GNRYAVPYVWGTTGIGYDVDKVKAALGDDAPVDSWDLIFKEENISKLKACGVAMLDSPSE 183
Query: 127 VIGSVLKYMGASYNSNN-IDSQVA 149
+I L Y+G NS N +D Q A
Sbjct: 184 IISIALHYLGLPSNSTNPLDYQKA 207
>gi|255521833|ref|ZP_05389070.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL
J1-175]
Length = 287
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ PEL +I +++ REV+G L +G
Sbjct: 62 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 118
Query: 137 ASYNSNN 143
S N N
Sbjct: 119 YSLNDTN 125
>gi|82702108|ref|YP_411674.1| extracellular solute-binding protein [Nitrosospira multiformis ATCC
25196]
gi|82410173|gb|ABB74282.1| extracellular solute-binding protein, family 1 [Nitrosospira
multiformis ATCC 25196]
Length = 366
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE----LAGRISMVNSPREVIG 129
G I++ PY + ++ + K K + L P + W ++ P+ + GR+++++S RE++
Sbjct: 128 GNIYSVPYAYTLSLLGFNKEKIEQLGL-PTDTWAIIFEPKYLEKIRGRVTVLDSQRELMA 186
Query: 130 SVLKYMGASYNSNN 143
+ LKY+G S N +
Sbjct: 187 AALKYLGYSVNDTD 200
>gi|399004707|ref|ZP_10707316.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
gi|398128847|gb|EJM18227.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
Length = 366
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 57 EDQDWFKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPEL 114
+D + K L + G + PY +G ++I + +K + D AP++ W +++PE
Sbjct: 109 QDPELLKLLD---RNDPGNQYGVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLVFKPEN 165
Query: 115 AGR-----ISMVNSPREVIGSVLKYMGASYNSNN 143
+ ++M++SP E++ L Y+G NS N
Sbjct: 166 MEKLKSCGVAMLDSPSEILPLALHYLGLDPNSQN 199
>gi|329770316|ref|ZP_08261700.1| hypothetical protein HMPREF0433_01464 [Gemella sanguinis M325]
gi|328836740|gb|EGF86394.1| hypothetical protein HMPREF0433_01464 [Gemella sanguinis M325]
Length = 358
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y K+K DL E W DLW L I ++ RE++G L+
Sbjct: 128 GNEYSIPYFWGTLGILYNKTKV-PEDLK-FEKWDDLWDSRLQNNILAIDGAREMLGLALQ 185
Query: 134 YMGASYNSNN 143
G S N N
Sbjct: 186 SEGRSVNEKN 195
>gi|418171086|ref|ZP_12807713.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19451]
gi|418198143|ref|ZP_12834603.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47778]
gi|353837256|gb|EHE17342.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19451]
gi|353862781|gb|EHE42711.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47778]
Length = 284
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+ E I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKLEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|312963929|ref|ZP_07778400.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens WH6]
gi|311281964|gb|EFQ60574.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens WH6]
Length = 363
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWF----KCLSHKWKRTRGKIWAAPYRWGAMM 87
D+V + +L+ IE + +P+ + +W K + G +A PY +G ++
Sbjct: 74 DVVVPSNVFLAKQIEAGVFQPLDRNQLPNWNHLDPKLMKLIEANDPGNQFAVPYMYGTIL 133
Query: 88 IAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 140
I + +K + D AP++ W ++ E + +++++SP E++ L+++G N
Sbjct: 134 IGFNPAKVKAALGDNAPVDSWDLIFNEENISKLKQCGVALLDSPSEILPLALQHLGLDPN 193
Query: 141 SNN 143
SNN
Sbjct: 194 SNN 196
>gi|253681534|ref|ZP_04862331.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum D str. 1873]
gi|253561246|gb|EES90698.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum D str. 1873]
Length = 347
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTR---GKIWAAPYRWGAMMI 88
D+V D ++ I + ++E I + FK + K+K ++ PY WG + I
Sbjct: 79 DVVIPSDYMITKMINENMLEKIDMKNISN-FKDIPAKFKNLAFDPKNQYSVPYMWGTVGI 137
Query: 89 AYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
Y + I+ W LW P+ +I MV+S R+ I LK +G S N+ N
Sbjct: 138 IYNTKLIKDK----IDSWNALWNPKYKDQILMVDSQRDAIAVALKKLGYSINTTN 188
>gi|225860834|ref|YP_002742343.1| ABC transporter substrate-binding protein - spermidine/putrescine
transport [Streptococcus pneumoniae Taiwan19F-14]
gi|298229495|ref|ZP_06963176.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae str. Canada MDR_19F]
gi|298254203|ref|ZP_06977789.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae str. Canada MDR_19A]
gi|298502663|ref|YP_003724603.1| spermidine/putrescine ABC transporter ATP-binding protein
[Streptococcus pneumoniae TCH8431/19A]
gi|387788032|ref|YP_006253100.1| spermidine/putrescine ABC transporter substrate-binding protein
[Streptococcus pneumoniae ST556]
gi|417312864|ref|ZP_12099576.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA04375]
gi|418083237|ref|ZP_12720436.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44288]
gi|418085378|ref|ZP_12722560.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47281]
gi|418094174|ref|ZP_12731301.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA49138]
gi|418100366|ref|ZP_12737454.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 7286-06]
gi|418120038|ref|ZP_12756989.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA18523]
gi|418141897|ref|ZP_12778710.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13455]
gi|418150796|ref|ZP_12787543.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA14798]
gi|418153055|ref|ZP_12789794.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA16121]
gi|418164646|ref|ZP_12801316.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17371]
gi|418195543|ref|ZP_12832023.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47688]
gi|418223373|ref|ZP_12850014.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 5185-06]
gi|418227895|ref|ZP_12854513.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 3063-00]
gi|419425331|ref|ZP_13965528.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 7533-05]
gi|419427281|ref|ZP_13967464.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 5652-06]
gi|419429461|ref|ZP_13969628.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11856]
gi|419436177|ref|ZP_13976267.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 8190-05]
gi|419438415|ref|ZP_13978484.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13499]
gi|419444483|ref|ZP_13984498.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19923]
gi|419446614|ref|ZP_13986619.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 7879-04]
gi|419448940|ref|ZP_13988937.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 4075-00]
gi|419451687|ref|ZP_13991673.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae EU-NP02]
gi|419502041|ref|ZP_14041725.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47628]
gi|419519098|ref|ZP_14058704.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA08825]
gi|419528719|ref|ZP_14068261.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17719]
gi|421287358|ref|ZP_15738124.1| ABC transporter substrate-binding protein-spermidine/putrescine
transport [Streptococcus pneumoniae GA58771]
gi|225726915|gb|ACO22766.1| ABC transporter substrate-binding protein - spermidine/putrescine
transport [Streptococcus pneumoniae Taiwan19F-14]
gi|298238258|gb|ADI69389.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus pneumoniae
TCH8431/19A]
gi|327389572|gb|EGE87917.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA04375]
gi|353755313|gb|EHD35918.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44288]
gi|353757333|gb|EHD37927.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47281]
gi|353764670|gb|EHD45218.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA49138]
gi|353773075|gb|EHD53574.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 7286-06]
gi|353789151|gb|EHD69547.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA18523]
gi|353806148|gb|EHD86422.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13455]
gi|353814679|gb|EHD94902.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA14798]
gi|353817606|gb|EHD97808.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA16121]
gi|353829507|gb|EHE09638.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17371]
gi|353862070|gb|EHE42003.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47688]
gi|353879499|gb|EHE59325.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 5185-06]
gi|353882123|gb|EHE61935.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 3063-00]
gi|379137774|gb|AFC94565.1| ABC transporter substrate-binding protein - spermidine/putrescine
transport [Streptococcus pneumoniae ST556]
gi|379537474|gb|EHZ02657.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13499]
gi|379551409|gb|EHZ16504.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11856]
gi|379564742|gb|EHZ29738.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17719]
gi|379572176|gb|EHZ37133.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19923]
gi|379600254|gb|EHZ65035.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47628]
gi|379614154|gb|EHZ78864.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 7879-04]
gi|379615197|gb|EHZ79906.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 8190-05]
gi|379618734|gb|EHZ83409.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 5652-06]
gi|379619768|gb|EHZ84438.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 7533-05]
gi|379623392|gb|EHZ88026.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae EU-NP02]
gi|379623998|gb|EHZ88631.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 4075-00]
gi|379640935|gb|EIA05473.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA08825]
gi|395889767|gb|EJH00774.1| ABC transporter substrate-binding protein-spermidine/putrescine
transport [Streptococcus pneumoniae GA58771]
Length = 356
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+ E I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKLEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|421268280|ref|ZP_15719150.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SPAR95]
gi|395869775|gb|EJG80889.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SPAR95]
Length = 356
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+ E I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKLEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|378951052|ref|YP_005208540.1| periplasmic spermidine putrescine-binding protein [Pseudomonas
fluorescens F113]
gi|359761066|gb|AEV63145.1| periplasmic spermidine putrescine-binding protein [Pseudomonas
fluorescens F113]
Length = 367
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +A PY WG I Y K R D AP+ W +++ E + ++M++SP E
Sbjct: 124 GNRYAVPYLWGTTGIGYDVDKVRGALGDNAPVNSWDLIFKEENISKLQSCGVAMLDSPSE 183
Query: 127 VIGSVLKYMGASYNSNN 143
+I L Y+G NS N
Sbjct: 184 IISIALNYLGLPSNSKN 200
>gi|282851490|ref|ZP_06260855.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Lactobacillus
gasseri 224-1]
gi|282557458|gb|EFB63055.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Lactobacillus
gasseri 224-1]
Length = 236
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y KF K I+ W DLW + I +V+S R+++G L MG
Sbjct: 11 YSVPYFWGTLGIVYN-DKFVKP--GQIKHWNDLWSKKYRHNILLVDSARDIMGLSLASMG 67
Query: 137 ASYN-SNNIDSQVAGGKV 153
S N +N++D ++A K+
Sbjct: 68 KSLNTTNSLDLKLAKTKL 85
>gi|260914211|ref|ZP_05920684.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Pasteurella dagmatis ATCC
43325]
gi|260631844|gb|EEX50022.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Pasteurella dagmatis ATCC
43325]
Length = 348
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ P +GA IAY D + + W DLW P+ G + M++ PRE+ L
Sbjct: 121 KGNKYSLPQLFGATGIAYNT---ESQDPSKFQSWADLWSPDFKGTLQMLDDPRELFNIAL 177
Query: 133 KYMGASYNSNN 143
MG N+ +
Sbjct: 178 LKMGKDPNTQD 188
>gi|148993055|ref|ZP_01822649.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP9-BS68]
gi|168489550|ref|ZP_02713749.1| ABC transporter substrate-binding protein - spermidine/putrescine
transport [Streptococcus pneumoniae SP195]
gi|417679314|ref|ZP_12328711.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17570]
gi|418125996|ref|ZP_12762902.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44511]
gi|418191234|ref|ZP_12827738.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47388]
gi|418214544|ref|ZP_12841279.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA54644]
gi|418234554|ref|ZP_12861131.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA08780]
gi|419484578|ref|ZP_14024354.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA43257]
gi|419508426|ref|ZP_14048079.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA49542]
gi|421220521|ref|ZP_15677363.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070425]
gi|421222823|ref|ZP_15679608.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070531]
gi|421279130|ref|ZP_15729937.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17301]
gi|421293906|ref|ZP_15744629.1| ABC transporter substrate-binding protein-spermidine/putrescine
transport [Streptococcus pneumoniae GA56113]
gi|421301215|ref|ZP_15751885.1| ABC transporter substrate-binding protein-spermidine/putrescine
transport [Streptococcus pneumoniae GA19998]
gi|147928256|gb|EDK79273.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP9-BS68]
gi|183571919|gb|EDT92447.1| ABC transporter substrate-binding protein - spermidine/putrescine
transport [Streptococcus pneumoniae SP195]
gi|332073693|gb|EGI84172.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17570]
gi|353795936|gb|EHD76281.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44511]
gi|353857135|gb|EHE37098.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47388]
gi|353871827|gb|EHE51698.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA54644]
gi|353887372|gb|EHE67151.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA08780]
gi|379584089|gb|EHZ48966.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA43257]
gi|379612144|gb|EHZ76866.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA49542]
gi|395587353|gb|EJG47709.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070425]
gi|395587621|gb|EJG47967.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070531]
gi|395879742|gb|EJG90799.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17301]
gi|395894196|gb|EJH05176.1| ABC transporter substrate-binding protein-spermidine/putrescine
transport [Streptococcus pneumoniae GA56113]
gi|395898775|gb|EJH09719.1| ABC transporter substrate-binding protein-spermidine/putrescine
transport [Streptococcus pneumoniae GA19998]
Length = 356
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+ E I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKLEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|104782608|ref|YP_609106.1| ABC transporter periplasmic polyamine-binding protein [Pseudomonas
entomophila L48]
gi|95111595|emb|CAK16316.1| putative ABC transporter, periplasmic polyamine-binding protein
[Pseudomonas entomophila L48]
Length = 367
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +A PY WG I Y K + D AP+ W +++ E + ++M++SP E
Sbjct: 124 GNRYAVPYLWGTTGIGYDVDKVKAALGDQAPVNSWDLIFKEENISKLKACGVAMLDSPSE 183
Query: 127 VIGSVLKYMGASYNSNN 143
+I L Y+G NS+N
Sbjct: 184 IISIALNYLGLPSNSSN 200
>gi|409992696|ref|ZP_11275872.1| extracellular solute-binding protein [Arthrospira platensis str.
Paraca]
gi|409936455|gb|EKN77943.1| extracellular solute-binding protein [Arthrospira platensis str.
Paraca]
Length = 360
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY+W + I Y + ++ I W L+ P+ A ++S+++ R +G+VL
Sbjct: 131 GNQYSIPYQWVTLGIGYNIDRVGEN----INSWSQLFDPDFASKVSLLDDMRHTMGAVLI 186
Query: 134 YMGASYNSNNIDSQVAGGKVAVQ 156
Y+G N+ N + A +Q
Sbjct: 187 YLGYDPNTTNQNEIFAARDFLIQ 209
>gi|15903286|ref|NP_358836.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus pneumoniae R6]
gi|116516276|ref|YP_816685.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus pneumoniae D39]
gi|418074209|ref|ZP_12711463.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11184]
gi|421206831|ref|ZP_15663885.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2090008]
gi|421230005|ref|ZP_15686672.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2061376]
gi|421236486|ref|ZP_15693084.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2071004]
gi|421266385|ref|ZP_15717266.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SPAR27]
gi|421292277|ref|ZP_15743012.1| ABC transporter substrate-binding protein-spermidine/putrescine
transport [Streptococcus pneumoniae GA56348]
gi|421312209|ref|ZP_15762812.1| ABC transporter substrate-binding protein-spermidine/putrescine
transport [Streptococcus pneumoniae GA58981]
gi|15458881|gb|AAL00047.1| ABC transporter substrate-binding protein - spermidine/putrescine
transport [Streptococcus pneumoniae R6]
gi|116076852|gb|ABJ54572.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae D39]
gi|353749269|gb|EHD29918.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11184]
gi|395575106|gb|EJG35677.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2090008]
gi|395594537|gb|EJG54773.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2061376]
gi|395602331|gb|EJG62474.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2071004]
gi|395867601|gb|EJG78724.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SPAR27]
gi|395892405|gb|EJH03396.1| ABC transporter substrate-binding protein-spermidine/putrescine
transport [Streptococcus pneumoniae GA56348]
gi|395910638|gb|EJH21510.1| ABC transporter substrate-binding protein-spermidine/putrescine
transport [Streptococcus pneumoniae GA58981]
Length = 356
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+ E I + + REV+G L
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKLEYKNSIMLFDGAREVLGLGLN 184
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 185 SLGYSLNSKD 194
>gi|339497979|ref|ZP_08658955.1| spermidine/putrescine-binding periplasmic protein [Leuconostoc
pseudomesenteroides KCTC 3652]
Length = 359
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY WG + I Y + D ++ W DLW + ++ +++S R+V+G L
Sbjct: 130 RHNKYSVPYFWGTLGIIYNDKYLKASD---VQHWDDLWSSKFKNQVMLIDSARDVLGFTL 186
Query: 133 KYMGASYNSNNI-DSQVAGGKVAV 155
G S N + D A GK+
Sbjct: 187 ITQGKSVNDKSTADLAAAQGKLTT 210
>gi|256851433|ref|ZP_05556822.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii 27-2-CHN]
gi|260660854|ref|ZP_05861769.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii 115-3-CHN]
gi|297206247|ref|ZP_06923642.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus jensenii
JV-V16]
gi|256616495|gb|EEU21683.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii 27-2-CHN]
gi|260548576|gb|EEX24551.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii 115-3-CHN]
gi|297149373|gb|EFH29671.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus jensenii
JV-V16]
Length = 357
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRT---RG 74
+ KVK SY DLV D ++ + L++ I + + FK ++ ++ +
Sbjct: 74 YTKVKQGGTSY---DLVIPSDYMITKMRKGHLLDKINTDKLSN-FKNINKQFLHQSFDKK 129
Query: 75 KIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKY 134
++ PY WG + I Y + I+ W DLW + I +V+S R+++GS L
Sbjct: 130 NQYSVPYFWGTLGIIYNDKYVKP---GEIQHWNDLWNSKWKNSILLVDSARDIMGSSLVS 186
Query: 135 MGASYNSNN 143
+G S N+ N
Sbjct: 187 LGYSMNTTN 195
>gi|418293171|ref|ZP_12905090.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064573|gb|EHY77316.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 365
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 20/150 (13%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGE-------DQDWF 62
+F++ + K+ A S+ Y D+V +P+L+ I+ + + + + D+D
Sbjct: 57 VFDSNEVLEAKLLAGSSGY---DVVVPSNPFLAKQIKAGVFQKLDKSKLPNWENLDKDLL 113
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR--- 117
K L G ++ PY WG + I Y K + D AP++ W +++PE +
Sbjct: 114 KALE---PSDPGNQYSIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKS 170
Query: 118 --ISMVNSPREVIGSVLKYMGASYNSNNID 145
++ ++SP E++ + L Y+G + +S D
Sbjct: 171 CGVAFLDSPTEMLPAALHYLGYAPDSGKAD 200
>gi|258646316|ref|ZP_05733785.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister
invisus DSM 15470]
gi|260403707|gb|EEW97254.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister
invisus DSM 15470]
Length = 353
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY +K+ K + W DLW+ E GR+ ++N REVIG LK G
Sbjct: 131 YSVVYTWGVTGIAYN-TKYIKDTPSS---WNDLWKDEYKGRVILLNDNREVIGMGLKKNG 186
Query: 137 ASYNSNN 143
S NS +
Sbjct: 187 HSVNSKD 193
>gi|401871804|pdb|4GL0|A Chain A, Putative SpermidinePUTRESCINE ABC TRANSPORTER FROM
LISTERIA Monocytogenes
Length = 333
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ PEL +I +++ REV G L +G
Sbjct: 108 YSXPYFWGTLGIIYNKEXFPDKNF---DTWNALFDPELKNQILLIDGAREVXGLGLNSLG 164
Query: 137 ASYNSNN 143
S N N
Sbjct: 165 YSLNDTN 171
>gi|418157181|ref|ZP_12793897.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA16833]
gi|353823629|gb|EHE03803.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA16833]
Length = 290
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+ E I + + REV+G L
Sbjct: 135 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKLEYKNSIMLFDGAREVLGLGLN 190
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 191 SLGYSLNSKD 200
>gi|409385219|ref|ZP_11237904.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Lactococcus raffinolactis 4877]
gi|399207347|emb|CCK18819.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Lactococcus raffinolactis 4877]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K + P W+DLW + + +++ REVIG L G
Sbjct: 133 YSIPYFWGTLGITYNDEKVK----TPPAHWQDLWSSDYKNNLMLIDGAREVIGLALNEQG 188
Query: 137 ASYNSNNI 144
S NS ++
Sbjct: 189 DSVNSKDM 196
>gi|398877211|ref|ZP_10632359.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398202938|gb|EJM89770.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 365
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 80 PYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 133
PY WG + + Y + ++ AP+ L++PELA + ISM++SP EV+ VL
Sbjct: 128 PYTWGTIGLTYNDEQIKQRLPDAPVNSLDMLFKPELASKFADCGISMIDSPDEVLAVVLN 187
Query: 134 YMG 136
Y+G
Sbjct: 188 YLG 190
>gi|452750134|ref|ZP_21949886.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
gi|452005784|gb|EMD98064.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
Length = 365
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 20/150 (13%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGE-------DQDWF 62
+F++ + K+ A S+ Y D+V +P+L+ I+ + + + + D+D
Sbjct: 57 VFDSNEVLEAKLLAGSSGY---DVVVPSNPFLAKQIKAGVFQKLDKSKLPNWENLDKDLL 113
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR--- 117
K L G ++ PY WG + I Y K + + AP++ W +++PE +
Sbjct: 114 KALE---PSDPGNQYSIPYMWGTIGIGYNVDKVKAVLGENAPVDSWDLVFKPENIEKLKS 170
Query: 118 --ISMVNSPREVIGSVLKYMGASYNSNNID 145
+S ++SP E++ + L Y+G + +S D
Sbjct: 171 CGVSFLDSPTEILPAALHYLGYAPDSGKAD 200
>gi|418563214|ref|ZP_13127656.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21262]
gi|371971758|gb|EHO89154.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21262]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|403068806|ref|ZP_10910138.1| spermidine:putrescine ABC transporter [Oceanobacillus sp. Ndiop]
Length = 358
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y + + I + DLW PEL +I +++ RE++G L
Sbjct: 129 GNNYSVPYFWGTVGIIYNPTLLPEG--KEITGFNDLWDPELENKILLIDGAREILGMGLN 186
Query: 134 YMGASYNSNNID 145
+G S N + D
Sbjct: 187 SLGYSLNDTDED 198
>gi|418430079|ref|ZP_13002996.1| hypothetical protein MQE_01535 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387719144|gb|EIK07096.1| hypothetical protein MQE_01535 [Staphylococcus aureus subsp. aureus
VRS3a]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|398940763|ref|ZP_10669441.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398162380|gb|EJM50576.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 365
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 78 AAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 130
A PY WG++ I + K ++ AP W L++PE A + IS ++SP E++ +
Sbjct: 126 AFPYMWGSIGIGFNPEKVKEVLGSNAPTNSWDLLFKPENAAKLKACGISFLDSPTEMLPA 185
Query: 131 VLKYMGASYNSNNIDSQVA 149
L Y+G NS N D Q+A
Sbjct: 186 ALHYLGYPVNSQNKD-QIA 203
>gi|386830638|ref|YP_006237292.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus HO 5096 0412]
gi|417798993|ref|ZP_12446145.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21310]
gi|418655576|ref|ZP_13217427.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-105]
gi|334274885|gb|EGL93191.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21310]
gi|375036327|gb|EHS29402.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-105]
gi|385196030|emb|CCG15647.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus HO 5096 0412]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|431929349|ref|YP_007242383.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
gi|431827636|gb|AGA88753.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
Length = 365
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 20/150 (13%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGE-------DQDWF 62
+F++ + K+ A S+ Y D+V +P+L+ I+ + + + + D+D
Sbjct: 57 VFDSNEVLEAKLLAGSSGY---DVVVPSNPFLAKQIKAGVFQKLDKSKLPNWENLDKDLL 113
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR--- 117
K L G ++ PY WG + I Y K + D AP++ W +++PE +
Sbjct: 114 KALE---PSDPGNQYSIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKS 170
Query: 118 --ISMVNSPREVIGSVLKYMGASYNSNNID 145
++ ++SP E++ + L Y+G + +S D
Sbjct: 171 CGVAFLDSPTEMLPAALHYLGYAPDSGKAD 200
>gi|398883084|ref|ZP_10638044.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398197341|gb|EJM84321.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
Length = 365
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 80 PYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 133
PY WG + + Y + ++ AP+ L++PELA + ISM++SP EV+ VL
Sbjct: 128 PYTWGTIGLTYNDEQIKQRLPDAPVNSLDMLFKPELASKFADCGISMIDSPDEVLAVVLN 187
Query: 134 YMG 136
Y+G
Sbjct: 188 YLG 190
>gi|387780215|ref|YP_005755013.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus LGA251]
gi|344177317|emb|CCC87783.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus LGA251]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|227530085|ref|ZP_03960134.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus vaginalis
ATCC 49540]
gi|227350006|gb|EEJ40297.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus vaginalis
ATCC 49540]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y K + ++ W+ LW P L + +++S R+V L
Sbjct: 129 GNQYSVPYFWGTLGIIYNDQKITGQE---VQHWEQLWSPRLKNNLLLIDSARDVFAVALI 185
Query: 134 YMGASYNSNN 143
G S N+ N
Sbjct: 186 TQGKSVNTTN 195
>gi|389684687|ref|ZP_10176014.1| putrescine-binding periplasmic protein, PotF family [Pseudomonas
chlororaphis O6]
gi|388551424|gb|EIM14690.1| putrescine-binding periplasmic protein, PotF family [Pseudomonas
chlororaphis O6]
Length = 366
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G + PY +G ++I + +K + D AP++ W +++PE + ++M++SP E
Sbjct: 123 GNQYGVPYMYGTVLIGFNPAKVKAALGDKAPVDSWDLVFKPENMEKLKSCGVAMLDSPTE 182
Query: 127 VIGSVLKYMGASYNSNN 143
++ L Y+G NS N
Sbjct: 183 ILPLALHYLGLDPNSQN 199
>gi|385781330|ref|YP_005757501.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus 11819-97]
gi|418574553|ref|ZP_13138720.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21333]
gi|364522319|gb|AEW65069.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus 11819-97]
gi|371978684|gb|EHO95925.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21333]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|311032173|ref|ZP_07710263.1| spermidine/putrescine import ABC transporter,
spermidine/putrescine-binding protein PotD [Bacillus sp.
m3-13]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y S D I W DLW +L I +++ REV+G L +G
Sbjct: 132 YSVPYFWGTVGIVYNPSML---DGKEITSWNDLWDEDLKNEILLIDGAREVMGMALNSLG 188
Query: 137 ASYNSNN 143
S N +
Sbjct: 189 YSLNDTD 195
>gi|443469735|ref|ZP_21059886.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pseudomonas pseudoalcaligenes KF707]
gi|442899200|gb|ELS25715.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pseudomonas pseudoalcaligenes KF707]
Length = 349
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 43/186 (23%)
Query: 6 SIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCL 65
++DG +N +L K++A A+Y D++ + IE+ L++ I D
Sbjct: 56 TMDGYDSNETL-LAKLQAGGANY---DVIVPSHSIMRTLIEQGLLQEI----DSPGLPNF 107
Query: 66 SHKWKRTR------GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGR 117
+H R G+ ++APY WG +Y ++ L + WK+ + RPEL G+
Sbjct: 108 AHVKPAFRNPDFDPGRKYSAPYLWGTTGFSYDSARVPGGTLD--DSWKEFFEPRPELQGQ 165
Query: 118 ISMVNSPREVIGSVLKYMGAS-------------------------YNSNNIDSQVAGGK 152
++ +++P +I + Y+G Y+S+N ++A G+
Sbjct: 166 LAALDTPSSLINAASHYLGVDECTENPQDAKRILELLQKQKPFLKMYSSDNTVDRMASGE 225
Query: 153 VAVQQN 158
V + QN
Sbjct: 226 VIMMQN 231
>gi|421615516|ref|ZP_16056540.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
gi|409782589|gb|EKN62144.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
Length = 365
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 20/146 (13%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGE-------DQDWF 62
+F++ + K+ A S+ Y D+V +P+L+ I+ + + + + D+D
Sbjct: 57 VFDSNEVLEAKLLAGSSGY---DVVVPSNPFLAKQIKAGVFQKLDKSKLPNWENLDKDLL 113
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR--- 117
K L G ++ PY WG + I Y K + D AP+ W +++PE +
Sbjct: 114 KALE---PSDPGNQYSIPYMWGTIGIGYNVEKVKAVLGDNAPVSSWDLVFKPENIEKLKS 170
Query: 118 --ISMVNSPREVIGSVLKYMGASYNS 141
+S ++SP E++ + L Y+G + +S
Sbjct: 171 CGVSFLDSPTEILPAALHYLGYAPDS 196
>gi|398929422|ref|ZP_10663932.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398167044|gb|EJM55127.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 366
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKF--RKHDLAPIEDWKDLWRPELAGR--- 117
K SH ++ + PY WG + + Y + R D AP+ L++PELA +
Sbjct: 115 KLRSHYEHSSKATV---PYTWGTIGLTYNAGQIAQRAPD-APVNSLDMLFKPELAAKFAD 170
Query: 118 --ISMVNSPREVIGSVLKYMG 136
ISM++SP EV+ VL Y+G
Sbjct: 171 CGISMIDSPDEVLAVVLNYLG 191
>gi|398838150|ref|ZP_10595432.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398116712|gb|EJM06470.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 365
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 78 AAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 130
A PY WG++ I Y +K ++ AP+ W L++PE A + IS ++SP E++ +
Sbjct: 126 AFPYMWGSIGIGYNPAKVKEVLGTNAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPA 185
Query: 131 VLKYMGASYNSNN 143
L Y+G NS +
Sbjct: 186 ALHYLGYPVNSQD 198
>gi|418993721|ref|ZP_13541358.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG290]
gi|377746880|gb|EHT70850.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG290]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|417891784|ref|ZP_12535841.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21200]
gi|341851070|gb|EGS91999.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21200]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|258423602|ref|ZP_05686492.1| ABC transporter extracellular binding protein [Staphylococcus
aureus A9635]
gi|418308093|ref|ZP_12919750.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21194]
gi|418559168|ref|ZP_13123714.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21252]
gi|418888895|ref|ZP_13443031.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1524]
gi|257846303|gb|EEV70327.1| ABC transporter extracellular binding protein [Staphylococcus
aureus A9635]
gi|365241826|gb|EHM82560.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21194]
gi|371975459|gb|EHO92753.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21252]
gi|377754405|gb|EHT78314.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1524]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|167032827|ref|YP_001668058.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
gi|166859315|gb|ABY97722.1| extracellular solute-binding protein family 1 [Pseudomonas putida
GB-1]
Length = 359
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G A PY WG + + R+ D+ P++ L++PE A R I+M +SP+E
Sbjct: 117 GNRHAVPYTWGTLGLGVNVEAVRQRLGDV-PLDSLDLLFKPEYASRLKDCGIAMPDSPQE 175
Query: 127 VIGSVLKYMGASYNSNNIDSQVAGGKVAVQ 156
VIG L Y+G S N D A + Q
Sbjct: 176 VIGVALNYLGKDPYSQNKDDLAAAQNLLSQ 205
>gi|82750711|ref|YP_416452.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus RF122]
gi|82656242|emb|CAI80656.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus RF122]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|385867927|pdb|4EQB|A Chain A, 1.5 Angstrom Crystal Structure Of SpermidinePUTRESCINE ABC
Transporter Substrate-Binding Protein From Streptococcus
Pneumoniae Strain Canada Mdr_19a In Complex With Calcium
And Hepes.
gi|385867928|pdb|4EQB|B Chain B, 1.5 Angstrom Crystal Structure Of SpermidinePUTRESCINE ABC
Transporter Substrate-Binding Protein From Streptococcus
Pneumoniae Strain Canada Mdr_19a In Complex With Calcium
And Hepes
Length = 330
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y ++ D AP E W DLW+ E I + + REV+G L
Sbjct: 103 GNKFSIPYFWGTLGIVYNETMV---DEAP-EHWDDLWKLEYKNSIMLFDGAREVLGLGLN 158
Query: 134 YMGASYNSNN 143
+G S NS +
Sbjct: 159 SLGYSLNSKD 168
>gi|418602598|ref|ZP_13165997.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21345]
gi|374394945|gb|EHQ66220.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21345]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|418282905|ref|ZP_12895662.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21202]
gi|365168502|gb|EHM59840.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21202]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|417895710|ref|ZP_12539688.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21235]
gi|341841387|gb|EGS82848.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21235]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|387602375|ref|YP_005733896.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus ST398]
gi|404478439|ref|YP_006709869.1| ABC transporter extracellular binding protein [Staphylococcus
aureus 08BA02176]
gi|418309901|ref|ZP_12921452.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21331]
gi|283470313|emb|CAQ49524.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus ST398]
gi|365238024|gb|EHM78863.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21331]
gi|404439928|gb|AFR73121.1| ABC transporter extracellular binding protein [Staphylococcus
aureus 08BA02176]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|258436148|ref|ZP_05689131.1| extracellular solute-binding protein, family 1 [Staphylococcus
aureus A9299]
gi|257848837|gb|EEV72822.1| extracellular solute-binding protein, family 1 [Staphylococcus
aureus A9299]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|375262549|ref|YP_005024779.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio sp. EJY3]
gi|369842977|gb|AEX23805.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio sp. EJY3]
Length = 344
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG I+Y +S + P+ W DLW ++ +++ R+V G LK G
Sbjct: 122 YSLPYIWGVTGISYNESMVEQ----PVTKWADLWDAHYEQQVMLIDDIRDVFGMALKMNG 177
Query: 137 ASYNSNN 143
S NS N
Sbjct: 178 HSVNSKN 184
>gi|15924092|ref|NP_371626.1| spermidine/putrescine-binding protein -like protein [Staphylococcus
aureus subsp. aureus Mu50]
gi|15926687|ref|NP_374220.1| hypothetical protein SA0953 [Staphylococcus aureus subsp. aureus
N315]
gi|148267595|ref|YP_001246538.1| extracellular solute-binding protein [Staphylococcus aureus subsp.
aureus JH9]
gi|150393650|ref|YP_001316325.1| extracellular solute-binding protein [Staphylococcus aureus subsp.
aureus JH1]
gi|156979425|ref|YP_001441684.1| spermidine/putrescine-binding protein precursor-like protein
[Staphylococcus aureus subsp. aureus Mu3]
gi|255005889|ref|ZP_05144490.2| spermidine/putrescine-binding protein precursor-like protein
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257795167|ref|ZP_05644146.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258407124|ref|ZP_05680273.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258421784|ref|ZP_05684705.1| spermidine/putrescine-binding periplasmic protein [Staphylococcus
aureus A9719]
gi|258443363|ref|ZP_05691706.1| potD protein [Staphylococcus aureus A8115]
gi|258444973|ref|ZP_05693290.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus A6300]
gi|258449852|ref|ZP_05697950.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A6224]
gi|258454951|ref|ZP_05702914.1| spermidine/putrescine-binding periplasmic protein potD
[Staphylococcus aureus A5937]
gi|269202713|ref|YP_003281982.1| spermidine/putrescine ABC transporter, spermidine [Staphylococcus
aureus subsp. aureus ED98]
gi|282894129|ref|ZP_06302360.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A8117]
gi|282928624|ref|ZP_06336221.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A10102]
gi|295405906|ref|ZP_06815715.1| hypothetical protein SMAG_01064 [Staphylococcus aureus A8819]
gi|296276503|ref|ZP_06859010.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus MR1]
gi|297246376|ref|ZP_06930220.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A8796]
gi|384864329|ref|YP_005749688.1| extracellular solute-binding family protein [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|387150244|ref|YP_005741808.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Staphylococcus aureus 04-02981]
gi|415691940|ref|ZP_11454006.1| hypothetical protein CGSSa03_02788 [Staphylococcus aureus subsp.
aureus CGS03]
gi|416839739|ref|ZP_11903097.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus O11]
gi|416848398|ref|ZP_11907741.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus O46]
gi|417652145|ref|ZP_12301898.1| putative spermidine/putrescine ABC transporter protein
[Staphylococcus aureus subsp. aureus 21172]
gi|417800731|ref|ZP_12447840.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21318]
gi|417894254|ref|ZP_12538276.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21201]
gi|418321797|ref|ZP_12933136.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus VCU006]
gi|418424241|ref|ZP_12997366.1| hypothetical protein MQA_01681 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418427168|ref|ZP_13000183.1| hypothetical protein MQC_01406 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418433038|ref|ZP_13005820.1| hypothetical protein MQG_01447 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418436702|ref|ZP_13008507.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS5]
gi|418439580|ref|ZP_13011290.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS6]
gi|418442625|ref|ZP_13014229.1| hypothetical protein MQM_00621 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418445690|ref|ZP_13017170.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS8]
gi|418448640|ref|ZP_13020034.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS9]
gi|418451446|ref|ZP_13022782.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS10]
gi|418454521|ref|ZP_13025784.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS11a]
gi|418457395|ref|ZP_13028600.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS11b]
gi|418568105|ref|ZP_13132459.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21272]
gi|418639784|ref|ZP_13202025.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-3]
gi|418653105|ref|ZP_13215051.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-99]
gi|418662610|ref|ZP_13224153.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-122]
gi|418875036|ref|ZP_13429298.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC93]
gi|418877941|ref|ZP_13432177.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1165]
gi|418880777|ref|ZP_13434996.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1213]
gi|418883704|ref|ZP_13437901.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1769]
gi|418886362|ref|ZP_13440511.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1150]
gi|418894554|ref|ZP_13448652.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1057]
gi|418914198|ref|ZP_13468170.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|418919949|ref|ZP_13473889.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC348]
gi|418931087|ref|ZP_13484934.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1750]
gi|418990963|ref|ZP_13538624.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1096]
gi|419784831|ref|ZP_14310592.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-M]
gi|424777737|ref|ZP_18204696.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus CM05]
gi|443635803|ref|ZP_21119925.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21236]
gi|13700903|dbj|BAB42199.1| potD [Staphylococcus aureus subsp. aureus N315]
gi|14246872|dbj|BAB57264.1| spermidine/putrescine-binding protein precursor homolog
[Staphylococcus aureus subsp. aureus Mu50]
gi|147740664|gb|ABQ48962.1| extracellular solute-binding protein, family 1 [Staphylococcus
aureus subsp. aureus JH9]
gi|149946102|gb|ABR52038.1| extracellular solute-binding protein family 1 [Staphylococcus
aureus subsp. aureus JH1]
gi|156721560|dbj|BAF77977.1| spermidine/putrescine-binding protein precursor homolog
[Staphylococcus aureus subsp. aureus Mu3]
gi|257789139|gb|EEV27479.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257841279|gb|EEV65724.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257842117|gb|EEV66545.1| spermidine/putrescine-binding periplasmic protein [Staphylococcus
aureus A9719]
gi|257851453|gb|EEV75392.1| potD protein [Staphylococcus aureus A8115]
gi|257856095|gb|EEV79013.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus A6300]
gi|257856772|gb|EEV79675.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A6224]
gi|257862831|gb|EEV85596.1| spermidine/putrescine-binding periplasmic protein potD
[Staphylococcus aureus A5937]
gi|262075003|gb|ACY10976.1| spermidine/putrescine ABC transporter, spermidine [Staphylococcus
aureus subsp. aureus ED98]
gi|282589663|gb|EFB94749.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A10102]
gi|282763615|gb|EFC03744.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A8117]
gi|285816783|gb|ADC37270.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Staphylococcus aureus 04-02981]
gi|294969341|gb|EFG45361.1| hypothetical protein SMAG_01064 [Staphylococcus aureus A8819]
gi|297176742|gb|EFH36002.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A8796]
gi|312829496|emb|CBX34338.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315130312|gb|EFT86299.1| hypothetical protein CGSSa03_02788 [Staphylococcus aureus subsp.
aureus CGS03]
gi|323440651|gb|EGA98361.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus O11]
gi|323441678|gb|EGA99324.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus O46]
gi|329725165|gb|EGG61654.1| putative spermidine/putrescine ABC transporter protein
[Staphylococcus aureus subsp. aureus 21172]
gi|334277733|gb|EGL95956.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21318]
gi|341852761|gb|EGS93645.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21201]
gi|365224412|gb|EHM65677.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus VCU006]
gi|371980787|gb|EHO97988.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21272]
gi|375016796|gb|EHS10431.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-3]
gi|375019817|gb|EHS13368.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-99]
gi|375035997|gb|EHS29088.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-122]
gi|377695555|gb|EHT19916.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1165]
gi|377695907|gb|EHT20264.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1057]
gi|377715438|gb|EHT39628.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1769]
gi|377715924|gb|EHT40110.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1750]
gi|377723085|gb|EHT47210.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1096]
gi|377726544|gb|EHT50655.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1150]
gi|377731670|gb|EHT55723.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1213]
gi|377757700|gb|EHT81588.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|377766948|gb|EHT90772.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC348]
gi|377771081|gb|EHT94839.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC93]
gi|383363675|gb|EID41003.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-M]
gi|387719583|gb|EIK07525.1| hypothetical protein MQC_01406 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387720828|gb|EIK08727.1| hypothetical protein MQA_01681 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387725904|gb|EIK13495.1| hypothetical protein MQG_01447 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387728551|gb|EIK16038.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS5]
gi|387731067|gb|EIK18407.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS6]
gi|387736676|gb|EIK23765.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS8]
gi|387738217|gb|EIK25270.1| hypothetical protein MQM_00621 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387738316|gb|EIK25360.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS9]
gi|387745418|gb|EIK32173.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS10]
gi|387745982|gb|EIK32727.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS11a]
gi|387747953|gb|EIK34652.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS11b]
gi|402346417|gb|EJU81507.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus CM05]
gi|408423334|emb|CCJ10745.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408425324|emb|CCJ12711.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408427312|emb|CCJ14675.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408429299|emb|CCJ26464.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408431287|emb|CCJ18602.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408433281|emb|CCJ20566.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408435272|emb|CCJ22532.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408437257|emb|CCJ24500.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|443408862|gb|ELS67373.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21236]
Length = 357
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|167856594|ref|ZP_02479296.1| PotD [Haemophilus parasuis 29755]
gi|167852275|gb|EDS23587.1| PotD [Haemophilus parasuis 29755]
Length = 277
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ P +GA IAY D A + W DLW+PE + +++ PRE L
Sbjct: 50 KGNKYSVPQLFGATEIAYNT---ETQDPANFQSWADLWKPEFKDTLQLLDDPREAFNIAL 106
Query: 133 KYMGASYNSNN 143
MG N+ +
Sbjct: 107 LKMGQDPNTQD 117
>gi|428306605|ref|YP_007143430.1| extracellular solute-binding protein [Crinalium epipsammum PCC
9333]
gi|428248140|gb|AFZ13920.1| extracellular solute-binding protein family 1 [Crinalium epipsammum
PCC 9333]
Length = 376
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLW--RPELAGRISMVNSPREVIGSVLKY 134
++ P WG + Y +K + +DW LW + +L+ ++++ N REV+G+ LK
Sbjct: 152 YSVPMTWGTTGLIYNTTKLKNQP----QDWNYLWDQQKQLSRKMTLQNDLREVMGATLKM 207
Query: 135 MGASYNSNN 143
+G SYNS +
Sbjct: 208 LGYSYNSTD 216
>gi|49483265|ref|YP_040489.1| ABC transporter [Staphylococcus aureus subsp. aureus MRSA252]
gi|257425154|ref|ZP_05601580.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257430452|ref|ZP_05606834.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 68-397]
gi|257433154|ref|ZP_05609512.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus E1410]
gi|257436053|ref|ZP_05612100.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus M876]
gi|282903651|ref|ZP_06311539.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus C160]
gi|282905420|ref|ZP_06313275.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282908392|ref|ZP_06316223.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282910679|ref|ZP_06318482.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282913877|ref|ZP_06321664.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus M899]
gi|282923923|ref|ZP_06331599.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus C101]
gi|283957846|ref|ZP_06375297.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus A017934/97]
gi|293500914|ref|ZP_06666765.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus 58-424]
gi|293509870|ref|ZP_06668579.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus M809]
gi|293526456|ref|ZP_06671141.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus M1015]
gi|295427590|ref|ZP_06820222.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591456|ref|ZP_06950094.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus MN8]
gi|379020809|ref|YP_005297471.1| ABC transporter, periplasmic spermidineputrescine-binding protein
PotD [Staphylococcus aureus subsp. aureus M013]
gi|384547288|ref|YP_005736541.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus subsp. aureus ED133]
gi|384868016|ref|YP_005748212.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus TCH60]
gi|415684381|ref|ZP_11449510.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus CGS00]
gi|417889005|ref|ZP_12533104.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21195]
gi|417904216|ref|ZP_12548046.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21269]
gi|418566398|ref|ZP_13130779.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21264]
gi|418581739|ref|ZP_13145819.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1605]
gi|418597618|ref|ZP_13161142.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21342]
gi|418891655|ref|ZP_13445772.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1176]
gi|418897429|ref|ZP_13451502.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900317|ref|ZP_13454375.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1214]
gi|418908809|ref|ZP_13462814.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG149]
gi|418916893|ref|ZP_13470852.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1267]
gi|418922681|ref|ZP_13476598.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1233]
gi|418950472|ref|ZP_13502646.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-160]
gi|418981932|ref|ZP_13529644.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1242]
gi|418985473|ref|ZP_13533161.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1500]
gi|49241394|emb|CAG40078.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257272130|gb|EEV04262.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257278580|gb|EEV09199.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 68-397]
gi|257281247|gb|EEV11384.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus E1410]
gi|257284335|gb|EEV14455.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus M876]
gi|282313895|gb|EFB44287.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus C101]
gi|282321945|gb|EFB52269.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus M899]
gi|282325284|gb|EFB55593.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282328057|gb|EFB58339.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282330712|gb|EFB60226.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282595269|gb|EFC00233.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus C160]
gi|283789995|gb|EFC28812.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus A017934/97]
gi|290920528|gb|EFD97591.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus M1015]
gi|291095919|gb|EFE26180.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus 58-424]
gi|291467320|gb|EFF09837.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus M809]
gi|295127948|gb|EFG57582.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|297576342|gb|EFH95058.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus MN8]
gi|298694337|gb|ADI97559.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus subsp. aureus ED133]
gi|312438521|gb|ADQ77592.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus TCH60]
gi|315193770|gb|EFU24165.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus CGS00]
gi|341848039|gb|EGS89208.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21269]
gi|341853073|gb|EGS93955.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21195]
gi|359830118|gb|AEV78096.1| ABC transporter, periplasmic spermidineputrescine-binding protein
PotD [Staphylococcus aureus subsp. aureus M013]
gi|371970611|gb|EHO88028.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21264]
gi|374393991|gb|EHQ65287.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21342]
gi|375376912|gb|EHS80414.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-160]
gi|377704044|gb|EHT28355.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1214]
gi|377706188|gb|EHT30488.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1242]
gi|377706533|gb|EHT30829.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1500]
gi|377711289|gb|EHT35522.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1605]
gi|377732612|gb|EHT56663.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1176]
gi|377736004|gb|EHT60034.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1233]
gi|377750067|gb|EHT74005.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1267]
gi|377754805|gb|EHT78711.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG149]
gi|377762208|gb|EHT86077.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC341D]
Length = 357
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|423618467|ref|ZP_17594301.1| hypothetical protein IIO_03793 [Bacillus cereus VD115]
gi|401254198|gb|EJR60434.1| hypothetical protein IIO_03793 [Bacillus cereus VD115]
Length = 349
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+++ +Q+ L
Sbjct: 182 FS-NSTKDDAELKTAATDLQKLL 203
>gi|386728782|ref|YP_006195165.1| Spermidine/putrescine-binding protein [Staphylococcus aureus subsp.
aureus 71193]
gi|418978655|ref|ZP_13526455.1| Spermidine/putrescine-binding protein [Staphylococcus aureus subsp.
aureus DR10]
gi|379993479|gb|EIA14925.1| Spermidine/putrescine-binding protein [Staphylococcus aureus subsp.
aureus DR10]
gi|384230075|gb|AFH69322.1| Spermidine/putrescine-binding protein [Staphylococcus aureus subsp.
aureus 71193]
Length = 357
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|325569084|ref|ZP_08145331.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus casseliflavus
ATCC 12755]
gi|325157542|gb|EGC69700.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus casseliflavus
ATCC 12755]
Length = 359
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPI-----AGGEDQDWFKCLSHKWKRTR 73
K+K + Y DLV + + IE+ L+ P+ G ED F + +
Sbjct: 78 TKIKQGGSRY---DLVFPSESIIPKMIEEGLLVPLDHQKLTGTEDLSPF-LMDQAFDPNN 133
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
++ PY WG + I + + D++ I W DLW P + MV+ RE +G L+
Sbjct: 134 --TYSIPYFWGTIGIM---ANTEEVDVSSIHGWGDLWNPAFKNDVLMVDGARETLGIALQ 188
Query: 134 YMGASYNSNN 143
+G S N +
Sbjct: 189 TLGLSQNEKD 198
>gi|171777632|ref|ZP_02919297.1| hypothetical protein STRINF_00132 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379705393|ref|YP_005203852.1| spermidine/putrescine ABC transporter,spermidine/putrescine-binding
protein [Streptococcus infantarius subsp. infantarius
CJ18]
gi|171283160|gb|EDT48584.1| ABC transporter, solute-binding protein [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|374682092|gb|AEZ62381.1| spermidine/putrescine ABC transporter,spermidine/putrescine-binding
protein [Streptococcus infantarius subsp. infantarius
CJ18]
Length = 357
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + K AP E W DLW+ E I +V+ RE +G L +G
Sbjct: 133 YSVPYFWGTLGIVYNDTMVDK---AP-EHWSDLWKQEYKNDIMLVDGAREAMGIGLGTLG 188
Query: 137 ASYNSNNIDSQVAGGK 152
S N+ ++ A K
Sbjct: 189 YSLNTKSMTELNAASK 204
>gi|282918801|ref|ZP_06326536.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus C427]
gi|282316611|gb|EFB46985.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus C427]
Length = 357
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|257427817|ref|ZP_05604215.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257274658|gb|EEV06145.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 65-1322]
Length = 357
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|428217887|ref|YP_007102352.1| extracellular solute-binding protein [Pseudanabaena sp. PCC 7367]
gi|427989669|gb|AFY69924.1| extracellular solute-binding protein family 1 [Pseudanabaena sp.
PCC 7367]
Length = 392
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ P G +AY + + + EDW+ +W R++++N PREV+G L
Sbjct: 161 GSAYSLPVSLGTTGLAYNSAAIIEEIGSEPEDWQFMWEHIDRLRLTLLNDPREVMGMALH 220
Query: 134 YMGASYNSNNID 145
+ SYNS+N D
Sbjct: 221 TLNYSYNSDNGD 232
>gi|398924115|ref|ZP_10661042.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398173857|gb|EJM61673.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 366
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 70 KRTRGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPE-----LAGRISMVN 122
K G + PY +G ++I + +K + + AP++ W +++PE A ++M++
Sbjct: 119 KNDPGNQYGMPYMYGTVLIGFNPAKVKAALGENAPVDSWDLVFKPENMEKLKACGVAMLD 178
Query: 123 SPREVIGSVLKYMGASYNSNNID 145
SP E++ L Y+G NS N D
Sbjct: 179 SPSEILPLALHYLGLDPNSQNPD 201
>gi|398897171|ref|ZP_10647991.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398177238|gb|EJM64926.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 367
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +A PY WG I Y K R D AP++ W +++ E R ++M++SP E
Sbjct: 124 GNQYAVPYLWGTNGIGYNIDKVRALLGDKAPVDSWDLVFKEENLARLGECGVAMLDSPSE 183
Query: 127 VIGSVLKYMGASYNSNN 143
++ L Y+G NS N
Sbjct: 184 MLPVALHYLGLPPNSTN 200
>gi|384549863|ref|YP_005739115.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus JKD6159]
gi|302332712|gb|ADL22905.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus JKD6159]
Length = 357
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|229074647|ref|ZP_04207670.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-18]
gi|229095872|ref|ZP_04226851.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-29]
gi|229101987|ref|ZP_04232701.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-28]
gi|229114826|ref|ZP_04244240.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-3]
gi|407703754|ref|YP_006827339.1| glycolate oxidase [Bacillus thuringiensis MC28]
gi|423380811|ref|ZP_17358095.1| hypothetical protein IC9_04164 [Bacillus cereus BAG1O-2]
gi|423443843|ref|ZP_17420749.1| hypothetical protein IEA_04173 [Bacillus cereus BAG4X2-1]
gi|423445901|ref|ZP_17422780.1| hypothetical protein IEC_00509 [Bacillus cereus BAG5O-1]
gi|423466935|ref|ZP_17443703.1| hypothetical protein IEK_04122 [Bacillus cereus BAG6O-1]
gi|423536331|ref|ZP_17512749.1| hypothetical protein IGI_04163 [Bacillus cereus HuB2-9]
gi|423538424|ref|ZP_17514815.1| hypothetical protein IGK_00516 [Bacillus cereus HuB4-10]
gi|423544663|ref|ZP_17521021.1| hypothetical protein IGO_01098 [Bacillus cereus HuB5-5]
gi|423625631|ref|ZP_17601409.1| hypothetical protein IK3_04229 [Bacillus cereus VD148]
gi|228668891|gb|EEL24319.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-3]
gi|228681570|gb|EEL35733.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-28]
gi|228687705|gb|EEL41604.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-29]
gi|228708529|gb|EEL60679.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-18]
gi|401132994|gb|EJQ40627.1| hypothetical protein IEC_00509 [Bacillus cereus BAG5O-1]
gi|401177008|gb|EJQ84200.1| hypothetical protein IGK_00516 [Bacillus cereus HuB4-10]
gi|401183638|gb|EJQ90750.1| hypothetical protein IGO_01098 [Bacillus cereus HuB5-5]
gi|401254469|gb|EJR60698.1| hypothetical protein IK3_04229 [Bacillus cereus VD148]
gi|401631563|gb|EJS49360.1| hypothetical protein IC9_04164 [Bacillus cereus BAG1O-2]
gi|402411975|gb|EJV44337.1| hypothetical protein IEA_04173 [Bacillus cereus BAG4X2-1]
gi|402414739|gb|EJV47066.1| hypothetical protein IEK_04122 [Bacillus cereus BAG6O-1]
gi|402461168|gb|EJV92882.1| hypothetical protein IGI_04163 [Bacillus cereus HuB2-9]
gi|407381439|gb|AFU11940.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis MC28]
Length = 349
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+++ +Q+ L
Sbjct: 182 FS-NSTKDDAELKTAATDLQKLL 203
>gi|420262882|ref|ZP_14765523.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus sp. C1]
gi|394770639|gb|EJF50443.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus sp. C1]
Length = 359
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPI-----AGGEDQDWFKCLSHKWKRTR 73
K+K + Y DLV + + IE+ L+ P+ G ED F + +
Sbjct: 78 TKIKQGGSRY---DLVFPSESIIPKMIEEGLLVPLDHQKLTGTEDLSPF-LMDQAFDPNN 133
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
++ PY WG + I + + D++ I W DLW P + MV+ RE +G L+
Sbjct: 134 --TYSIPYFWGTIGIM---ANTEEVDVSSIHGWGDLWNPAFKNDVLMVDGARETLGIALQ 188
Query: 134 YMGASYNSNN 143
+G S N +
Sbjct: 189 TLGLSQNEKD 198
>gi|282916352|ref|ZP_06324114.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus D139]
gi|283770164|ref|ZP_06343056.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus H19]
gi|282319792|gb|EFB50140.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus D139]
gi|283460311|gb|EFC07401.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus H19]
Length = 357
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|145640471|ref|ZP_01796055.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae R3021]
gi|145275057|gb|EDK14919.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae 22.4-21]
Length = 350
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRG--K 75
+ K+K + + DLV ++S I++++++PI + + + H +
Sbjct: 67 YAKLKLTQNTGSSYDLVFPSSYYVSKMIKEKMLQPIDQSKLTNIHQIPKHLLNKEFDPEN 126
Query: 76 IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 135
++ PY +G I + D I W DLW+PE G++ M + REV L
Sbjct: 127 KYSLPYVYGLTGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLD 183
Query: 136 GASYNSNN 143
G S N+ N
Sbjct: 184 GKSPNTTN 191
>gi|398918510|ref|ZP_10658505.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398171230|gb|EJM59140.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 367
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +A PY WG I Y K R D AP++ W +++ E R ++M++SP E
Sbjct: 124 GNQYAVPYLWGTNGIGYNIDKVRAVLGDKAPVDSWDLVFKEENLARLGECGVAMLDSPSE 183
Query: 127 VIGSVLKYMGASYNSNN 143
++ L Y+G NS N
Sbjct: 184 MLPVALHYLGLPPNSTN 200
>gi|229172027|ref|ZP_04299592.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
MM3]
gi|423404099|ref|ZP_17381272.1| hypothetical protein ICW_04497 [Bacillus cereus BAG2X1-2]
gi|423475271|ref|ZP_17451986.1| hypothetical protein IEO_00729 [Bacillus cereus BAG6X1-1]
gi|228611370|gb|EEK68627.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
MM3]
gi|401647306|gb|EJS64915.1| hypothetical protein ICW_04497 [Bacillus cereus BAG2X1-2]
gi|402436373|gb|EJV68404.1| hypothetical protein IEO_00729 [Bacillus cereus BAG6X1-1]
Length = 349
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQV 148
S NS D+Q+
Sbjct: 182 FS-NSTKDDTQL 192
>gi|407717664|ref|YP_006795069.1| spermidine/putrescine-binding periplasmic protein [Leuconostoc
carnosum JB16]
gi|407241420|gb|AFT81070.1| spermidine/putrescine-binding periplasmic protein [Leuconostoc
carnosum JB16]
Length = 359
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY WG + I Y D I+ W DLW + +I +++S R+V+G L
Sbjct: 130 RGNKYSLPYFWGTLGILYNDKFVNAKD---IKHWDDLWSTKFRNKIMLIDSARDVLGFTL 186
Query: 133 KYMGASYNSNN-IDSQVAGGKVAV 155
S N+ + D A GK+
Sbjct: 187 MTQNKSVNTRSAADLAAAQGKLTT 210
>gi|398894859|ref|ZP_10646897.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398181740|gb|EJM69290.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 366
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPE-----LAGRISMVNSPRE 126
G + PY +G ++I + +K + + AP++ W +++PE A ++M++SP E
Sbjct: 123 GNQYGVPYMYGTVLIGFNPAKVKAALGENAPVDSWDLVFKPENMEKLKACGVAMLDSPSE 182
Query: 127 VIGSVLKYMGASYNSNNID 145
++ L Y+G NS N D
Sbjct: 183 ILPLALHYLGLDPNSQNPD 201
>gi|377832212|ref|ZP_09815176.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus mucosae LM1]
gi|377554219|gb|EHT15934.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus mucosae LM1]
Length = 357
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY WG + I Y K + D + W+ LW P+L I M++S R+ + L
Sbjct: 128 RHNRYSIPYFWGTLGIVYNDQKVSRKD---VSHWRQLWSPKLKNNIMMIDSARDAMAVAL 184
Query: 133 KYMGASYNSNN 143
S N+ N
Sbjct: 185 ITQHHSVNTTN 195
>gi|398926042|ref|ZP_10662237.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398171299|gb|EJM59206.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 367
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +A PY WG I Y K R D AP++ W +++ E R ++M++SP E
Sbjct: 124 GNQYAVPYLWGTNGIGYNIDKVRAVLGDKAPVDSWDLVFKEENLARLGECGVAMLDSPSE 183
Query: 127 VIGSVLKYMGASYNSNN 143
++ L Y+G NS N
Sbjct: 184 MLPVALHYLGLPPNSTN 200
>gi|203284537|ref|YP_002222277.1| spermidine/putrescine ABC transporter, binding periplasmic protein
[Borrelia duttonii Ly]
gi|201083980|gb|ACH93571.1| spermidine/putrescine ABC transporter, binding periplasmic protein
[Borrelia duttonii Ly]
Length = 351
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG + I Y K+K D+ + ++ L+ + I+M++SP+E IG LK
Sbjct: 120 GNLYSVPIFWGVLGILYHKNKI---DINDMNEFDILFNEKYKKEIAMLDSPKENIGVALK 176
Query: 134 YMGASYNSNNI 144
+G S N ++I
Sbjct: 177 KLGYSLNEHSI 187
>gi|374338055|ref|YP_005094765.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Streptococcus macedonicus ACA-DC 198]
gi|372284165|emb|CCF02419.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Streptococcus macedonicus ACA-DC 198]
Length = 357
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + AP E W DLW E I +V+ REV+G L +G
Sbjct: 133 YSIPYFWGTLGIVYNDTMVEN---AP-EHWSDLWNSEYTNDIMLVDGAREVMGIGLGTLG 188
Query: 137 ASYNSNNI 144
S N+ ++
Sbjct: 189 YSLNTKSL 196
>gi|94313321|ref|YP_586530.1| spermidine\putrescine ABC transporter substrate-binding protein
[Cupriavidus metallidurans CH34]
gi|93357173|gb|ABF11261.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Cupriavidus metallidurans CH34]
Length = 362
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLA-PIEDWKDLWRPE----LAGRISMVNSPREVI 128
G +++ PY + ++ Y + R HDL W ++ P L GR+++++ PREVI
Sbjct: 123 GNVYSLPYDFTITLVGYNAT--RLHDLGLDASSWSLVFDPHMLEKLRGRVTVLDDPREVI 180
Query: 129 GSVLKYMGASYNSNN 143
+ L+Y G S NS +
Sbjct: 181 AAALRYKGHSGNSTD 195
>gi|423509201|ref|ZP_17485732.1| hypothetical protein IG3_00698 [Bacillus cereus HuA2-1]
gi|402456492|gb|EJV88265.1| hypothetical protein IG3_00698 [Bacillus cereus HuA2-1]
Length = 349
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WNDLWNDKYKGHVTLLNDSREVLGMGLKKNG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKEDAQLKTASNDLQKLL 203
>gi|383310636|ref|YP_005363446.1| spermidine/putrescine-binding periplasmic protein PotD2
[Pasteurella multocida subsp. multocida str. HN06]
gi|386834629|ref|YP_006239946.1| bacterial extracellular solute-binding protein, putative
[Pasteurella multocida subsp. multocida str. 3480]
gi|417854586|ref|ZP_12499873.1| PotD [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|421262975|ref|ZP_15714060.1| PotD [Pasteurella multocida subsp. multocida str. P52VAC]
gi|425065035|ref|ZP_18468155.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida P1059]
gi|338217661|gb|EGP03507.1| PotD [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|380871908|gb|AFF24275.1| spermidine/putrescine-binding periplasmic protein PotD2
[Pasteurella multocida subsp. multocida str. HN06]
gi|385201332|gb|AFI46187.1| bacterial extracellular solute-binding protein, putative
[Pasteurella multocida subsp. multocida str. 3480]
gi|401690388|gb|EJS85669.1| PotD [Pasteurella multocida subsp. multocida str. P52VAC]
gi|404384489|gb|EJZ80923.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida P1059]
Length = 348
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ P +GA IAY + D + + W DLW E G++ M++ PRE+ L
Sbjct: 121 KGNKYSLPQLFGATGIAYNTTN---QDPSHFQSWGDLWNAEFKGKVQMLDDPRELFNIAL 177
Query: 133 KYMGASYNSNN 143
MG N+ +
Sbjct: 178 LKMGKDPNTQD 188
>gi|203288071|ref|YP_002223086.1| spermidine/putrescine ABC transporter, binding periplasmic protein
[Borrelia recurrentis A1]
gi|201085291|gb|ACH94865.1| spermidine/putrescine ABC transporter, binding periplasmic protein
[Borrelia recurrentis A1]
Length = 351
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG + I Y K+K D+ + ++ L+ + I+M++SP+E IG LK
Sbjct: 120 GNLYSVPIFWGVLGILYHKNKI---DINDMNEFDILFNEKYKKEIAMLDSPKENIGVALK 176
Query: 134 YMGASYNSNNI 144
+G S N ++I
Sbjct: 177 KLGYSLNEHSI 187
>gi|306821382|ref|ZP_07454990.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550600|gb|EFM38583.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 363
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY W + + Y K K + ++ W LW + +I M++S R+ IG LK +G
Sbjct: 141 YSVPYMWQTVGVVYNKKKITEK----VDSWNILWNEKYKRKIIMLDSSRDTIGITLKKLG 196
Query: 137 ASYNSNNIDSQVAGGK 152
S NS N D ++ K
Sbjct: 197 YSLNSKN-DKEINAAK 211
>gi|398971400|ref|ZP_10683608.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398138956|gb|EJM27966.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 367
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDL-APIEDWKDLWRPELAGR---- 117
K SH ++ + PY WG + + Y ++ ++ AP+ L++PELA +
Sbjct: 116 KLRSHYEHSSKATV---PYTWGTIGLTYNAAQIKQRMADAPVNSLDMLFKPELAAKFADC 172
Query: 118 -ISMVNSPREVIGSVLKYMG 136
IS+++SP EV+ VL Y+G
Sbjct: 173 GISLIDSPDEVLAVVLNYLG 192
>gi|160895165|ref|ZP_02075938.1| hypothetical protein CLOL250_02725 [Clostridium sp. L2-50]
gi|156863199|gb|EDO56630.1| ABC transporter, solute-binding protein [Clostridium sp. L2-50]
Length = 354
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 16/148 (10%)
Query: 22 KAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------TRGK 75
K KS D+V D + I + ++E + DQD LS+ + G
Sbjct: 77 KVKSEDEGTYDIVQPSDYMVESMIAQGMLEKL----DQDALTNLSNIGSQYLDPTYDPGN 132
Query: 76 IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 135
+++ PY+ G IA K I+ + DL+ P L G+I ++ R VIG + M
Sbjct: 133 VYSVPYQGGVAAIAVNTDKVSTD----IKGYADLFDPSLKGQIVALDDYRAVIGMTERSM 188
Query: 136 GASYNSNNID--SQVAGGKVAVQQNLAL 161
G S N + ++V + ++ N+A+
Sbjct: 189 GLSMNETDTAKLAEVETKLLTLKDNIAV 216
>gi|15602125|ref|NP_245197.1| protein PotD [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720489|gb|AAK02344.1| PotD [Pasteurella multocida subsp. multocida str. Pm70]
Length = 348
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ P +GA IAY + D + + W DLW E G++ M++ PRE+ L
Sbjct: 121 KGNKYSLPQLFGATGIAYNTTN---QDPSHFQSWGDLWNAEFKGKVQMLDDPRELFNIAL 177
Query: 133 KYMGASYNSNN 143
MG N+ +
Sbjct: 178 LKMGKDPNTQD 188
>gi|398977232|ref|ZP_10686989.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
gi|398138474|gb|EJM27495.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
Length = 367
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDL-APIEDWKDLWRPELAGR---- 117
K SH + + PY WG + + Y + ++ AP+ L++PELA +
Sbjct: 116 KLRSHYEHSNKATV---PYTWGTIGLTYNAEQIKQRMADAPVNSLDMLFKPELAAKFADC 172
Query: 118 -ISMVNSPREVIGSVLKYMG 136
ISM++SP EV+ VL Y+G
Sbjct: 173 GISMIDSPDEVLAVVLNYLG 192
>gi|386859872|ref|YP_006272578.1| Spermidine/putrescine ABC transporter, binding periplasmic protein
[Borrelia crocidurae str. Achema]
gi|384934753|gb|AFI31426.1| Spermidine/putrescine ABC transporter, binding periplasmic protein
[Borrelia crocidurae str. Achema]
Length = 349
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G +++ P WG + I Y K+K D+ + ++ L+ + I+M++SP+E IG LK
Sbjct: 118 GNLYSVPIFWGVLGILYHKNKI---DINDMNEFDILFNEKYKKEIAMLDSPKENIGVALK 174
Query: 134 YMGASYNSNNI 144
+G S N ++I
Sbjct: 175 KLGYSLNEHSI 185
>gi|425738066|ref|ZP_18856334.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus massiliensis S46]
gi|425480551|gb|EKU47716.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus massiliensis S46]
Length = 357
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G +A PY +G + I Y K K+ W DL +P+L I +V+S RE++G L
Sbjct: 128 KGNRYAVPYFFGTVGILYDKDKYSD---MTFNSWNDLLKPQLKQDILLVDSAREIVGIAL 184
Query: 133 KYMGASYNSNN 143
S N+ +
Sbjct: 185 NMNHDSLNTTD 195
>gi|425062947|ref|ZP_18466072.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida X73]
gi|404383653|gb|EJZ80104.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida X73]
Length = 348
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ P +GA IAY + D + + W DLW E G++ M++ PRE+ L
Sbjct: 121 KGNKYSLPQLFGATGIAYNTTN---QDPSHFQSWGDLWNAEFKGKVQMLDDPRELFNIAL 177
Query: 133 KYMGASYNSNN 143
MG N+ +
Sbjct: 178 LKMGKDPNTQD 188
>gi|293396549|ref|ZP_06640825.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Serratia odorifera DSM
4582]
gi|291420813|gb|EFE94066.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Serratia odorifera DSM
4582]
Length = 348
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WGA I + H + W DLW+P+ A + + + REV L+ +G
Sbjct: 125 YSIPYIWGATAIGVNSEEIDPHS---VTSWADLWKPQYASSLLLTDDAREVFQMALRKLG 181
Query: 137 ASYNSNN 143
S N+ N
Sbjct: 182 YSGNTTN 188
>gi|18310953|ref|NP_562887.1| spermidine/putrescine ABC transporter [Clostridium perfringens str.
13]
gi|168212994|ref|ZP_02638619.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens CPE str. F4969]
gi|18145635|dbj|BAB81677.1| probable spermidine/putrescine ABC transporter [Clostridium
perfringens str. 13]
gi|170715466|gb|EDT27648.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens CPE str. F4969]
Length = 360
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + P++ W LW P+ ++ M +S R+ + K +G
Sbjct: 135 YSVPYMWGTVGIIYNTKRVSD----PVDSWNILWNPKYKDQVIMPDSVRDAMAVAEKKLG 190
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S N+ N+D A K + Q
Sbjct: 191 YSLNTENLDQIEAAKKELMTQ 211
>gi|423460733|ref|ZP_17437530.1| hypothetical protein IEI_03873 [Bacillus cereus BAG5X2-1]
gi|401140786|gb|EJQ48342.1| hypothetical protein IEI_03873 [Bacillus cereus BAG5X2-1]
Length = 349
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKDDAQLKTAANDLQKLL 203
>gi|378774665|ref|YP_005176908.1| spermidine/putrescine-binding periplasmic protein PotD2
[Pasteurella multocida 36950]
gi|356597213|gb|AET15939.1| spermidine/putrescine-binding periplasmic protein PotD2
[Pasteurella multocida 36950]
Length = 348
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ P +GA IAY + D + + W DLW E G++ M++ PRE+ L
Sbjct: 121 KGNKYSLPQLFGATGIAYNTTN---QDPSHFQSWGDLWNAEFKGKVQMLDDPRELFNIAL 177
Query: 133 KYMGASYNSNN 143
MG N+ +
Sbjct: 178 LKMGKDPNTQD 188
>gi|398960848|ref|ZP_10678347.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398153501|gb|EJM42000.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 366
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G + PY +G ++I + +K + D AP++ W +++PE + ++M++SP E
Sbjct: 123 GNQYGVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLVFKPENMEKLKSCGVAMLDSPSE 182
Query: 127 VIGSVLKYMGASYNSNN 143
++ L Y+G NS N
Sbjct: 183 ILPLALHYLGLDPNSQN 199
>gi|229132181|ref|ZP_04261039.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST196]
gi|228651328|gb|EEL07305.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST196]
Length = 349
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ + W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKETPTS----WNDLWNEKYKGHVTLLNDSREVLGMGLKKNG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKEDAQLKTASADLQKLL 203
>gi|114331324|ref|YP_747546.1| extracellular solute-binding protein [Nitrosomonas eutropha C91]
gi|114308338|gb|ABI59581.1| extracellular solute-binding protein, family 1 [Nitrosomonas
eutropha C91]
Length = 369
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE----LAGRISMVNSPREVIGSVL 132
++ PY + +I + + K + +L P + W ++ PE + GRI++++S RE++ + L
Sbjct: 134 YSVPYAYTTTLIGFNREKLAELNL-PTDSWAIIFEPEYLKKIKGRITVLDSQRELMAAAL 192
Query: 133 KYMGAS 138
KY+G S
Sbjct: 193 KYLGYS 198
>gi|366086397|ref|ZP_09452882.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
zeae KCTC 3804]
Length = 357
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y KF K + ++ W LW P+ I +++S R+V L
Sbjct: 129 GNKYSIPYFWGTLGIIYN-DKFVK--ASEVQHWNQLWNPKFKDSIMLIDSARDVFAPALI 185
Query: 134 YMGASYNSNN 143
MG S N N
Sbjct: 186 SMGQSVNETN 195
>gi|309782676|ref|ZP_07677397.1| polyamine ABC transporter protein [Ralstonia sp. 5_7_47FAA]
gi|404397371|ref|ZP_10989162.1| hypothetical protein HMPREF0989_02854 [Ralstonia sp. 5_2_56FAA]
gi|308918454|gb|EFP64130.1| polyamine ABC transporter protein [Ralstonia sp. 5_7_47FAA]
gi|348614022|gb|EGY63585.1| hypothetical protein HMPREF0989_02854 [Ralstonia sp. 5_2_56FAA]
Length = 370
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 76 IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE----LAGRISMVNSPREVIGSV 131
+++ PY + +I Y +++ R+ L P W ++ P+ + G++++++ PREVI +
Sbjct: 133 VFSLPYDFTITLIGYNEARIRELGLDPT-SWSLVFDPKVLSKIRGKVTVLDDPREVIAAA 191
Query: 132 LKYMGASYNSNNIDSQVAGGKVAVQQNL 159
L+Y G S NS + +Q++ A++Q +
Sbjct: 192 LRYKGYSANSTSA-AQLSEAIEAIRQAM 218
>gi|238022429|ref|ZP_04602855.1| hypothetical protein GCWU000324_02336 [Kingella oralis ATCC 51147]
gi|237867043|gb|EEP68085.1| hypothetical protein GCWU000324_02336 [Kingella oralis ATCC 51147]
Length = 382
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 74 GKIWAAPYRWGAMMIAYKK---SKFRKHDLAPIEDWKDLWRPELAGR-----ISMVNSPR 125
G +A PY WG +A K +K D P +W ++ PE G+ IS +SP
Sbjct: 139 GNKYAVPYFWGINTLAINKKLVAKALGTDQLPANEWDLVFNPEYTGKLKHCGISFFDSPT 198
Query: 126 EVIGSVLKYMGASYNSNN 143
E VLKY+G NSN+
Sbjct: 199 EQFPLVLKYIGKDPNSND 216
>gi|398869461|ref|ZP_10624827.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398230320|gb|EJN16361.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 367
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 80 PYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 133
PY WG + + Y + ++ AP+ L++PELA R IS+++SP EV+ VL
Sbjct: 130 PYTWGTIGLTYNAEQIKQRLPDAPVNSLDMLFKPELAARFADCGISVIDSPDEVLAVVLN 189
Query: 134 YMG 136
Y+G
Sbjct: 190 YLG 192
>gi|425897434|ref|ZP_18874025.1| putrescine-binding periplasmic protein, PotF family [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397892198|gb|EJL08676.1| putrescine-binding periplasmic protein, PotF family [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 366
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G + PY +G ++I + +K + D AP++ W +++PE + ++M++SP E
Sbjct: 123 GNQYGVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLVFKPENMEKLKSCGVAMLDSPSE 182
Query: 127 VIGSVLKYMGASYNSNN 143
++ L Y+G NS N
Sbjct: 183 ILPLALHYLGLDPNSQN 199
>gi|392393637|ref|YP_006430239.1| spermidine/putrescine-binding periplasmic protein
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390524715|gb|AFM00446.1| spermidine/putrescine-binding periplasmic protein
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 349
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 17/151 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAG------GEDQDWFKCLSHKWKR 71
+ K+KA +A Y D+ D ++ I + L+ I + D FK L+ K
Sbjct: 70 YVKIKAGTAKY---DVAIPSDYMITKMIHEGLLHTIDMNTIPNYAKIDDRFKNLAFDTKN 126
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
++ PY WG + I Y K+ ++ W LW + A +I M++S R+ I
Sbjct: 127 E----YSVPYMWGTVGIIYNKTMVD----GVVDSWDILWDKKYAKQILMLDSQRDSIAVA 178
Query: 132 LKYMGASYNSNNIDSQVAGGKVAVQQNLALL 162
LK +G S NS K+ +QQ L+
Sbjct: 179 LKKLGYSLNSREEKELDEAKKLLIQQKPLLM 209
>gi|257865397|ref|ZP_05645050.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC30]
gi|257871729|ref|ZP_05651382.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC10]
gi|257799331|gb|EEV28383.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC30]
gi|257805893|gb|EEV34715.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC10]
Length = 356
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPI-----AGGEDQDWFKCLSHKWKRTR 73
K+K + Y DLV + + IE+ L+ P+ G ED F + +
Sbjct: 75 TKIKQGGSRY---DLVFPSESIIPKMIEEGLLVPLDHQKLTGTEDLSPF-LMDQAFDPDN 130
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
++ PY WG + I + + D++ I W DLW P + MV+ RE +G L+
Sbjct: 131 --TYSIPYFWGTIGIM---ANTEEVDVSSIHGWSDLWDPAFKNDVLMVDGARETLGIALQ 185
Query: 134 YMGASYNSNN 143
+G S N +
Sbjct: 186 TLGLSQNEKD 195
>gi|424923630|ref|ZP_18346991.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304790|gb|EJZ58752.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 366
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G + PY +G ++I + +K + D AP++ W +++PE + ++M++SP E
Sbjct: 123 GNQYGVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLVFKPENMEKLKSCGVAMLDSPSE 182
Query: 127 VIGSVLKYMGASYNSNN 143
++ L Y+G NS N
Sbjct: 183 ILPLALHYLGLDPNSQN 199
>gi|163939195|ref|YP_001644079.1| extracellular solute-binding protein [Bacillus weihenstephanensis
KBAB4]
gi|229010675|ref|ZP_04167875.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
DSM 2048]
gi|229057017|ref|ZP_04196411.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH603]
gi|229166221|ref|ZP_04293981.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH621]
gi|423486501|ref|ZP_17463183.1| hypothetical protein IEU_01124 [Bacillus cereus BtB2-4]
gi|423492225|ref|ZP_17468869.1| hypothetical protein IEW_01123 [Bacillus cereus CER057]
gi|423500984|ref|ZP_17477601.1| hypothetical protein IEY_04211 [Bacillus cereus CER074]
gi|423516040|ref|ZP_17492521.1| hypothetical protein IG7_01110 [Bacillus cereus HuA2-4]
gi|423594690|ref|ZP_17570721.1| hypothetical protein IIG_03558 [Bacillus cereus VD048]
gi|423601276|ref|ZP_17577276.1| hypothetical protein III_04078 [Bacillus cereus VD078]
gi|423663736|ref|ZP_17638905.1| hypothetical protein IKM_04133 [Bacillus cereus VDM022]
gi|423667066|ref|ZP_17642095.1| hypothetical protein IKO_00763 [Bacillus cereus VDM034]
gi|423676900|ref|ZP_17651839.1| hypothetical protein IKS_04443 [Bacillus cereus VDM062]
gi|163861392|gb|ABY42451.1| extracellular solute-binding protein family 1 [Bacillus
weihenstephanensis KBAB4]
gi|228617319|gb|EEK74384.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH621]
gi|228720294|gb|EEL71870.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH603]
gi|228750640|gb|EEM00466.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
DSM 2048]
gi|401154308|gb|EJQ61726.1| hypothetical protein IEY_04211 [Bacillus cereus CER074]
gi|401156509|gb|EJQ63913.1| hypothetical protein IEW_01123 [Bacillus cereus CER057]
gi|401165883|gb|EJQ73193.1| hypothetical protein IG7_01110 [Bacillus cereus HuA2-4]
gi|401223642|gb|EJR30210.1| hypothetical protein IIG_03558 [Bacillus cereus VD048]
gi|401230703|gb|EJR37209.1| hypothetical protein III_04078 [Bacillus cereus VD078]
gi|401295636|gb|EJS01260.1| hypothetical protein IKM_04133 [Bacillus cereus VDM022]
gi|401304510|gb|EJS10062.1| hypothetical protein IKO_00763 [Bacillus cereus VDM034]
gi|401307161|gb|EJS12618.1| hypothetical protein IKS_04443 [Bacillus cereus VDM062]
gi|402439282|gb|EJV71289.1| hypothetical protein IEU_01124 [Bacillus cereus BtB2-4]
Length = 349
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ + W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKETPTS----WNDLWNEKYKGHVTLLNDSREVLGMGLKKNG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKEDAQLKTASADLQKLL 203
>gi|347751388|ref|YP_004858953.1| extracellular solute-binding protein family 1 [Bacillus coagulans
36D1]
gi|347583906|gb|AEP00173.1| extracellular solute-binding protein family 1 [Bacillus coagulans
36D1]
Length = 357
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y S I W DLW P+L +I +V+ REV+G L +
Sbjct: 132 YSVPYFWGTVGIVYNSSMLGGKK---ITSWDDLWDPDLKNQILLVDGAREVMGMGLNSLH 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|90961100|ref|YP_535016.1| spermidine/putrescine-binding protein [Lactobacillus salivarius
UCC118]
gi|90820294|gb|ABD98933.1| Spermidine/putrescine-binding protein [Lactobacillus salivarius
UCC118]
Length = 361
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEP-----IAGGEDQD-WFKCLSHKWKR 71
F K+K Y D+ D + +++L+ P I G ++ D F LS
Sbjct: 78 FTKIKQGGTPY---DIAVPSDYMIQKMAKEKLLLPLDKHKIKGMDNNDPQFLDLSFD--- 131
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
+ ++ PY WG + I Y + I +W DLW + +I ++ RE IG
Sbjct: 132 -KHNKYSVPYFWGTLGIVYNDKYIKP---GEITNWNDLWNSKYRKQILFIDGAREFIGIG 187
Query: 132 LKYMGASYNSNNIDSQV 148
L +G S NS N DSQ+
Sbjct: 188 LNSLGYSLNSKN-DSQI 203
>gi|309803912|ref|ZP_07697996.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LactinV 11V1-d]
gi|309804517|ref|ZP_07698583.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LactinV 09V1-c]
gi|309809178|ref|ZP_07703050.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners SPIN 2503V10-D]
gi|312875270|ref|ZP_07735279.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LEAF 2053A-b]
gi|315653315|ref|ZP_07906237.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus iners ATCC
55195]
gi|325911831|ref|ZP_08174235.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners
UPII 143-D]
gi|308164007|gb|EFO66270.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LactinV 11V1-d]
gi|308166170|gb|EFO68387.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LactinV 09V1-c]
gi|308170478|gb|EFO72499.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners SPIN 2503V10-D]
gi|311089233|gb|EFQ47668.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LEAF 2053A-b]
gi|315489240|gb|EFU78880.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus iners ATCC
55195]
gi|325476337|gb|EGC79499.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners
UPII 143-D]
Length = 357
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y KF K + I+ W DLW+ + +I +V+S R+++G L
Sbjct: 129 GNNYSIPYFWGTLGIIYN-DKFVK--MGEIKHWNDLWKSKFKHQILLVDSARDIMGLSLI 185
Query: 134 YMGASYNSNN 143
M S NS +
Sbjct: 186 SMKNSVNSQD 195
>gi|47566174|ref|ZP_00237202.1| PotD [Bacillus cereus G9241]
gi|47556727|gb|EAL15058.1| PotD [Bacillus cereus G9241]
Length = 349
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ P W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---VPTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKDDAQLKTAATDLQKLL 203
>gi|398838183|ref|ZP_10595465.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398116745|gb|EJM06503.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 367
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 80 PYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 133
PY WG + + Y + ++ AP+ L++PELA R ISM++SP EV+ L
Sbjct: 130 PYTWGTIGLTYNAEQIKQRMPDAPVNSLDMLFKPELAARFADCGISMIDSPDEVLAVALN 189
Query: 134 YMG 136
Y+G
Sbjct: 190 YLG 192
>gi|398816806|ref|ZP_10575447.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. BC25]
gi|398031945|gb|EJL25313.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. BC25]
Length = 351
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
Y WG IAY K ++ + W DLW GR+ M+N PREV+G L G S +
Sbjct: 133 YTWGITGIAYNKKYVKETPTS----WNDLWNEAYKGRVIMLNDPREVMGMALIKNGFSNS 188
Query: 141 SNNID 145
+ N +
Sbjct: 189 TTNTE 193
>gi|358451773|ref|ZP_09162206.1| extracellular solute-binding protein [Marinobacter manganoxydans
MnI7-9]
gi|357224242|gb|EHJ02774.1| extracellular solute-binding protein [Marinobacter manganoxydans
MnI7-9]
Length = 346
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG +A + P+ W DLW GR+ + N REV L+ +G
Sbjct: 122 FSVPYLWGTTGLAVDTADIEGE---PVTAWGDLWEDRFDGRVMLTNDMREVFHVGLRVLG 178
Query: 137 ASYNSNNIDS 146
S NS N D
Sbjct: 179 YSGNSTNPDE 188
>gi|227892400|ref|ZP_04010205.1| spermidine/putrescine-binding protein [Lactobacillus salivarius
ATCC 11741]
gi|385839911|ref|YP_005863235.1| Spermidine/putrescine-binding protein [Lactobacillus salivarius
CECT 5713]
gi|227865807|gb|EEJ73228.1| spermidine/putrescine-binding protein [Lactobacillus salivarius
ATCC 11741]
gi|300214032|gb|ADJ78448.1| Spermidine/putrescine-binding protein [Lactobacillus salivarius
CECT 5713]
Length = 361
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEP-----IAGGEDQD-WFKCLSHKWKR 71
F K+K Y D+ D + +++L+ P I G ++ D F LS
Sbjct: 78 FTKIKQGGTPY---DIAVPSDYMIQKMAKEKLLLPLDKHKIKGMDNNDPQFLDLSFD--- 131
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
+ ++ PY WG + I Y + I +W DLW + +I ++ RE IG
Sbjct: 132 -KHNKYSVPYFWGTLGIVYNDKYIKP---GEITNWNDLWNSKYRKQILFIDGAREFIGIG 187
Query: 132 LKYMGASYNSNNIDSQV 148
L +G S NS N DSQ+
Sbjct: 188 LNSLGYSLNSKN-DSQI 203
>gi|423588228|ref|ZP_17564315.1| hypothetical protein IIE_03640 [Bacillus cereus VD045]
gi|401226736|gb|EJR33270.1| hypothetical protein IIE_03640 [Bacillus cereus VD045]
Length = 349
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGVGLKKHG 181
Query: 137 ASYNSNNIDSQV 148
S NS D+Q+
Sbjct: 182 FS-NSTKDDAQL 192
>gi|381400369|ref|ZP_09925339.1| Spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Kingella kingae
PYKK081]
gi|380834589|gb|EIC14424.1| Spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Kingella kingae
PYKK081]
Length = 391
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK---HDLAPIEDWKDLWRPELAGR-----ISMVNSPR 125
G +A PY WG +A K + K D P +W ++ PE + IS +SP
Sbjct: 147 GNKYAVPYFWGINTLAINKEQVSKALGTDQLPENEWDLVFNPEYTAKLKSCGISFFDSPT 206
Query: 126 EVIGSVLKYMGASYNSNN 143
E VLKYMG NS N
Sbjct: 207 EQFPLVLKYMGKDPNSEN 224
>gi|374705417|ref|ZP_09712287.1| polyamine ABC transporter periplasmic polyamine-binding protein
PotD [Pseudomonas sp. S9]
Length = 345
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAG-RISMVNSPREVIGSVLKYM 135
+ PY WG + I Y K+K K PIE W D + AG ++ M++ RE +G L
Sbjct: 123 YCMPYAWGTVGIFYNKTKVSK----PIETWDDFFAEAKAGKKVIMLDDMRETLGVGLIEN 178
Query: 136 GASYNSNNID 145
G S NS N D
Sbjct: 179 GKSVNSTNRD 188
>gi|330501318|ref|YP_004378187.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
gi|328915604|gb|AEB56435.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
Length = 365
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWF---KCLS 66
+F++ + K+ A S+ Y D+V +P+L+ I+ + + + + +W K L
Sbjct: 57 VFDSNEVLEAKLLAGSSGY---DVVVPSNPFLAKQIKAGVFQKLDKSKLPNWSNLDKDLL 113
Query: 67 HKWKRTR-GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----I 118
H + G ++ PY WG + I Y K + + AP++ W +++PE + +
Sbjct: 114 HALDPSDPGNQYSVPYMWGTIGIGYNVEKVKAALGEDAPVDSWDLVFKPENMEKLKSCGV 173
Query: 119 SMVNSPREVIGSVLKYMGASYNSNN 143
S ++SP E++ + L Y+G + +S++
Sbjct: 174 SFLDSPTEILPAALHYLGYAPDSSD 198
>gi|312871997|ref|ZP_07732077.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LEAF 2062A-h1]
gi|311092450|gb|EFQ50814.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LEAF 2062A-h1]
Length = 357
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y KF K + I+ W DLW+ + +I +V+S R+++G L
Sbjct: 129 GNNYSIPYFWGTLGIIYN-DKFVK--MGEIKHWNDLWKSKFKHQILLVDSARDIMGLSLI 185
Query: 134 YMGASYNSNN 143
M S NS +
Sbjct: 186 SMKNSVNSQD 195
>gi|417809286|ref|ZP_12455968.1| spermidine/putrescine-binding protein [Lactobacillus salivarius
GJ-24]
gi|418960540|ref|ZP_13512427.1| spermidine/putrescine-binding protein [Lactobacillus salivarius
SMXD51]
gi|335351242|gb|EGM52736.1| spermidine/putrescine-binding protein [Lactobacillus salivarius
GJ-24]
gi|380344207|gb|EIA32553.1| spermidine/putrescine-binding protein [Lactobacillus salivarius
SMXD51]
Length = 361
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEP-----IAGGEDQD-WFKCLSHKWKR 71
F K+K Y D+ D + +++L+ P I G ++ D F LS
Sbjct: 78 FTKIKQGGTPY---DIAVPSDYMIQKMAKEKLLLPLDKHKIKGMDNNDPQFLDLSFD--- 131
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
+ ++ PY WG + I Y + I +W DLW + +I ++ RE IG
Sbjct: 132 -KHNKYSVPYFWGTLGIVYNDKYIKP---GEITNWNDLWNSKYRKQILFIDGAREFIGIG 187
Query: 132 LKYMGASYNSNNIDSQV 148
L +G S NS N DSQ+
Sbjct: 188 LNSLGYSLNSKN-DSQI 203
>gi|398871678|ref|ZP_10626990.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398205487|gb|EJM92268.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 366
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 80 PYRWGAMMIAYKKSKF-RKHDLAPIEDWKDLWRPELAGRI-----SMVNSPREVIGSVLK 133
PY WG + + Y + ++ AP+ L++PELA +I SM++SP EV+ VL
Sbjct: 129 PYTWGTIGLTYNADQIAQRAPGAPVNSLDMLFKPELAAKIADCGISMIDSPDEVLAVVLN 188
Query: 134 YMG 136
Y+G
Sbjct: 189 YLG 191
>gi|343511033|ref|ZP_08748224.1| spermidine/putrescine-binding periplasmic protein (SPBP) [Vibrio
scophthalmi LMG 19158]
gi|342799979|gb|EGU35529.1| spermidine/putrescine-binding periplasmic protein (SPBP) [Vibrio
scophthalmi LMG 19158]
Length = 342
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG+ I Y D + + W DLW E AG++ + + R+V+G L G
Sbjct: 121 YSLPYMWGSTAIGYNSEVI---DGSQLTGWADLWNSEYAGQLLLTDDVRDVMGMALILGG 177
Query: 137 ASYNSNNID 145
S NS + D
Sbjct: 178 HSVNSQDTD 186
>gi|294677790|ref|YP_003578405.1| polyamine ABC transporter periplasmic polyamine-binding protein
PotD [Rhodobacter capsulatus SB 1003]
gi|294476610|gb|ADE85998.1| polyamine ABC transporter, periplasmic polyamine-binding protein
PotD-3 [Rhodobacter capsulatus SB 1003]
Length = 384
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWK---DLWRPELAGRISMVNSPREVIGS 130
GK++A P WG +A+ K + AP WK D+ R + +GR + + IGS
Sbjct: 158 GKLYAVPKNWGTTGMAWDSGKAK----APFTSWKEFFDVTRTDFSGRTIVHDYQLTTIGS 213
Query: 131 VLKYMGASYNS 141
LKY G S+NS
Sbjct: 214 ALKYFGYSFNS 224
>gi|228957658|ref|ZP_04119405.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|423629753|ref|ZP_17605501.1| hypothetical protein IK5_02604 [Bacillus cereus VD154]
gi|228802000|gb|EEM48870.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|401266887|gb|EJR72956.1| hypothetical protein IK5_02604 [Bacillus cereus VD154]
Length = 349
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQV 148
S NS D+Q+
Sbjct: 182 FS-NSTKDDAQL 192
>gi|116872186|ref|YP_848967.1| ABC transporter spermidine/putrescine binding protein [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|116741064|emb|CAK20184.1| ABC transporter spermidine/putrescine binding protein [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 357
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 77 WAAPYRWGAMMIAYKKSKF--RKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKY 134
++ PY WG + I Y K F +K D W L+ PEL +I +++ REV+G L
Sbjct: 132 YSMPYFWGTLGIIYNKKMFPDKKFDT-----WNALFDPELKNQILLIDGAREVMGLGLNS 186
Query: 135 MGASYNSNN 143
+G S N N
Sbjct: 187 LGYSLNDTN 195
>gi|301299805|ref|ZP_07206047.1| bacterial extracellular solute-binding protein [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|300852618|gb|EFK80260.1| bacterial extracellular solute-binding protein [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 362
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEP-----IAGGEDQD-WFKCLSHKWKR 71
F K+K Y D+ D + +++L+ P I G ++ D F LS
Sbjct: 78 FTKIKQGGTPY---DIAVPSDYMIQKMAKEKLLLPLDKHKIKGMDNNDPQFLDLSFD--- 131
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
+ ++ PY WG + I Y + I +W DLW + +I ++ RE IG
Sbjct: 132 -KHNKYSVPYFWGTLGIVYNDKYIKP---GEITNWNDLWNSKYRKQILFIDGAREFIGIG 187
Query: 132 LKYMGASYNSNNIDSQV 148
L +G S NS N DSQ+
Sbjct: 188 LNSLGYSLNSKN-DSQI 203
>gi|30019440|ref|NP_831071.1| spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579]
gi|206968033|ref|ZP_03228989.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1134]
gi|218231222|ref|YP_002366071.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus B4264]
gi|228951768|ref|ZP_04113867.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229043127|ref|ZP_04190854.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH676]
gi|229068938|ref|ZP_04202232.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
F65185]
gi|229078572|ref|ZP_04211130.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-2]
gi|229108843|ref|ZP_04238448.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-15]
gi|229126703|ref|ZP_04255715.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-Cer4]
gi|229149588|ref|ZP_04277820.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1550]
gi|229177795|ref|ZP_04305168.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
172560W]
gi|229189469|ref|ZP_04316486.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10876]
gi|365162078|ref|ZP_09358213.1| hypothetical protein HMPREF1014_03676 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423423468|ref|ZP_17400499.1| hypothetical protein IE5_01157 [Bacillus cereus BAG3X2-2]
gi|423434878|ref|ZP_17411859.1| hypothetical protein IE9_01059 [Bacillus cereus BAG4X12-1]
gi|423505017|ref|ZP_17481608.1| hypothetical protein IG1_02582 [Bacillus cereus HD73]
gi|423647316|ref|ZP_17622886.1| hypothetical protein IKA_01103 [Bacillus cereus VD169]
gi|449088176|ref|YP_007420617.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar kurstaki str. HD73]
gi|29894984|gb|AAP08272.1| Spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579]
gi|206736953|gb|EDZ54100.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1134]
gi|218159179|gb|ACK59171.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
B4264]
gi|228594060|gb|EEK51862.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10876]
gi|228605586|gb|EEK63034.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
172560W]
gi|228633934|gb|EEK90531.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1550]
gi|228656643|gb|EEL12469.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-Cer4]
gi|228674612|gb|EEL29851.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-15]
gi|228704716|gb|EEL57144.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-2]
gi|228714222|gb|EEL66103.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
F65185]
gi|228726219|gb|EEL77449.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH676]
gi|228807890|gb|EEM54410.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|363619395|gb|EHL70714.1| hypothetical protein HMPREF1014_03676 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401115158|gb|EJQ23011.1| hypothetical protein IE5_01157 [Bacillus cereus BAG3X2-2]
gi|401125116|gb|EJQ32876.1| hypothetical protein IE9_01059 [Bacillus cereus BAG4X12-1]
gi|401286134|gb|EJR91967.1| hypothetical protein IKA_01103 [Bacillus cereus VD169]
gi|402454883|gb|EJV86671.1| hypothetical protein IG1_02582 [Bacillus cereus HD73]
gi|449021933|gb|AGE77096.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar kurstaki str. HD73]
Length = 349
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G S N
Sbjct: 130 YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGVGLKKHGFS-N 184
Query: 141 SNNIDSQV 148
S D+Q+
Sbjct: 185 STKDDAQL 192
>gi|399516373|ref|ZP_10757980.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Leuconostoc pseudomesenteroides
4882]
gi|398648817|emb|CCJ66007.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Leuconostoc pseudomesenteroides
4882]
Length = 359
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY WG + I Y + D ++ W DLW + ++ +++S R+V+G L
Sbjct: 130 RHNKYSVPYFWGTLGIIYNDKYVKASD---VQHWDDLWSSKFKNQVMLIDSARDVLGFTL 186
Query: 133 KYMGASYNSNNI-DSQVAGGKVAV 155
G S N + D A GK+
Sbjct: 187 ITQGKSVNDKSTADLAAAQGKLTT 210
>gi|398990003|ref|ZP_10693215.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399012306|ref|ZP_10714631.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398116174|gb|EJM05944.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398145859|gb|EJM34633.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 366
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 57 EDQDWFKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPEL 114
+D + K L K G + PY G ++I + +K + D AP++ W +++PE
Sbjct: 109 QDPELLKLLG---KNDPGNQYGVPYMVGTVLIGFNPAKVKAALGDNAPVDSWDLVFKPEN 165
Query: 115 AGR-----ISMVNSPREVIGSVLKYMGASYNSNN 143
+ ++M++SP E++ L Y+G NS N
Sbjct: 166 MEKLKSCGVAMLDSPTEILPLALHYLGLDPNSQN 199
>gi|398860246|ref|ZP_10615895.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
gi|398234931|gb|EJN20787.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
Length = 367
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 80 PYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 133
PY WG + + Y + ++ AP+ L++PELA R ISM++SP EV+ L
Sbjct: 130 PYTWGTIGLTYNAEQIKQRMPDAPVNSLDMLFKPELAARFADCGISMIDSPDEVLAVALN 189
Query: 134 YMG 136
Y+G
Sbjct: 190 YLG 192
>gi|417787314|ref|ZP_12434997.1| spermidine Putrescine ABC transporter permease component potC
[Lactobacillus salivarius NIAS840]
gi|334307491|gb|EGL98477.1| spermidine Putrescine ABC transporter permease component potC
[Lactobacillus salivarius NIAS840]
Length = 361
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + + I +W DLW + +I ++ RE IG L +G
Sbjct: 136 YSVPYFWGTLGIVYNDKYIKPGE---ITNWNDLWNSKYRKQILFIDGAREFIGIGLNSLG 192
Query: 137 ASYNSNNIDSQV 148
S NS N DSQ+
Sbjct: 193 YSLNSKN-DSQI 203
>gi|424779942|ref|ZP_18206828.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Catellicoccus marimammalium M35/04/3]
gi|422843481|gb|EKU27918.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Catellicoccus marimammalium M35/04/3]
Length = 357
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y +F K L W DLW L I +++ REV+G L
Sbjct: 128 GNRYSIPYFWGTLGIVYN-DRFVKKGLT-FTTWNDLWDKSLKNNIMLIDGAREVMGLALN 185
Query: 134 YMGASYNSNN 143
G S NS N
Sbjct: 186 KNGDSLNSKN 195
>gi|398852578|ref|ZP_10609231.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398243702|gb|EJN29282.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 366
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 57 EDQDWFKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPEL 114
+D + K L K G + PY G ++I + +K + D AP++ W +++PE
Sbjct: 109 QDPELLKLLG---KNDPGNQYGVPYMVGTVLIGFNPAKVKAALGDNAPVDSWDLVFKPEN 165
Query: 115 AGR-----ISMVNSPREVIGSVLKYMGASYNSNN 143
+ ++M++SP E++ L Y+G NS N
Sbjct: 166 MEKLKSCGVAMLDSPTEILPLALHYLGLDPNSQN 199
>gi|423414921|ref|ZP_17392041.1| hypothetical protein IE1_04225 [Bacillus cereus BAG3O-2]
gi|423429297|ref|ZP_17406301.1| hypothetical protein IE7_01113 [Bacillus cereus BAG4O-1]
gi|401097841|gb|EJQ05863.1| hypothetical protein IE1_04225 [Bacillus cereus BAG3O-2]
gi|401121603|gb|EJQ29392.1| hypothetical protein IE7_01113 [Bacillus cereus BAG4O-1]
Length = 349
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G S N
Sbjct: 130 YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGVGLKKHGFS-N 184
Query: 141 SNNIDSQV 148
S D+Q+
Sbjct: 185 STKDDAQL 192
>gi|312867377|ref|ZP_07727586.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus parasanguinis F0405]
gi|311097078|gb|EFQ55313.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus parasanguinis F0405]
Length = 356
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEP-----IAGGEDQDWFKCLSHKWKRT 72
+ K+K +Y D+ + ++ +++ L+E I G E+ D K L+ +
Sbjct: 74 YTKIKQGGTTY---DIAIPSEYMIAKMMDEHLVEKLDQSKIKGMENIDP-KLLNQSFDP- 128
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
G ++ PY WG + I Y +K K+ AP + W DLWR E I M + REV+G L
Sbjct: 129 -GNQYSVPYFWGTLGIVYN-TKMVKN--AP-KHWSDLWREEYRNDIMMYDGAREVMGIGL 183
Query: 133 KYMGASYNSNN 143
+G S N +
Sbjct: 184 NTLGYSLNEKD 194
>gi|229143992|ref|ZP_04272408.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST24]
gi|296501969|ref|YP_003663669.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
BMB171]
gi|423643567|ref|ZP_17619185.1| hypothetical protein IK9_03512 [Bacillus cereus VD166]
gi|423654168|ref|ZP_17629467.1| hypothetical protein IKG_01156 [Bacillus cereus VD200]
gi|228639389|gb|EEK95803.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST24]
gi|296323021|gb|ADH05949.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
BMB171]
gi|401274147|gb|EJR80125.1| hypothetical protein IK9_03512 [Bacillus cereus VD166]
gi|401296635|gb|EJS02252.1| hypothetical protein IKG_01156 [Bacillus cereus VD200]
Length = 349
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHG 181
Query: 137 ASYNSNNIDSQV 148
S NS D+Q+
Sbjct: 182 FS-NSTKDDAQL 192
>gi|418004716|ref|ZP_12644729.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
UW1]
gi|410548952|gb|EKQ23134.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
UW1]
Length = 357
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY WG + I Y KF K + ++ W LW P+ I +++S R+V L
Sbjct: 128 RNNKYSIPYFWGTLGIIYN-DKFVK--ASEVQHWDQLWNPKFKDSIMLIDSARDVFAPAL 184
Query: 133 KYMGASYNSNN 143
MG S N N
Sbjct: 185 ISMGKSVNETN 195
>gi|77458599|ref|YP_348104.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77382602|gb|ABA74115.1| putative putrescine-binding periplasmic protein [Pseudomonas
fluorescens Pf0-1]
Length = 367
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDL-APIEDWKDLWRPELAGR---- 117
K SH + + PY WG + + Y + ++ AP+ L++PELA +
Sbjct: 116 KLRSHYEHSNKATV---PYTWGTIGLTYNAEQIQQRMADAPVNSLDMLFKPELAAKFADC 172
Query: 118 -ISMVNSPREVIGSVLKYMG 136
ISM++SP EV+ VL Y+G
Sbjct: 173 GISMIDSPDEVLAVVLNYLG 192
>gi|424922898|ref|ZP_18346259.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304058|gb|EJZ58020.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 367
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDL-APIEDWKDLWRPELAGR---- 117
K SH ++ + PY WG + + Y ++ ++ AP+ L++PELA +
Sbjct: 116 KLRSHYEHSSKATV---PYTWGTIGLTYNAAQIQQRMADAPVNSLDMLFKPELAAKFADC 172
Query: 118 -ISMVNSPREVIGSVLKYMG 136
IS+++SP EV+ VL Y+G
Sbjct: 173 GISLIDSPDEVLAVVLNYLG 192
>gi|399543330|ref|YP_006556638.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
BSs20148]
gi|399158662|gb|AFP29225.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
BSs20148]
Length = 346
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY WG + + D P+ W DLW GR+ + N REV L
Sbjct: 118 KGNEYSVPYMWGTTGLGVDTATI---DGEPVTAWADLWEERFNGRVILTNDMREVFHLAL 174
Query: 133 KYMGASYNSNNIDSQ 147
+ +G Y+ N+ D Q
Sbjct: 175 RVLG--YSGNSTDPQ 187
>gi|417989189|ref|ZP_12629703.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
A2-362]
gi|410539285|gb|EKQ13821.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
A2-362]
Length = 357
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY WG + I Y KF K + ++ W LW P+ I +++S R+V L
Sbjct: 128 RNNKYSIPYFWGTLGIIYN-DKFVK--ASEVQHWDQLWNPKFKDSIMLIDSARDVFAPAL 184
Query: 133 KYMGASYNSNN 143
MG S N N
Sbjct: 185 ISMGKSVNETN 195
>gi|145637462|ref|ZP_01793121.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae PittHH]
gi|145269408|gb|EDK09352.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae PittHH]
Length = 350
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRG--K 75
+ K+K + DLV ++S I++++++PI + + + H +
Sbjct: 67 YAKLKLTQNTGSGYDLVFPSSYYVSKMIKEKMLQPIDQSKLTNIHQIPKHLLNKEFDPEN 126
Query: 76 IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 135
++ PY +G I + D I W DLW+PE G++ M + REV L
Sbjct: 127 KYSLPYVYGLTGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLD 183
Query: 136 GASYNSNN 143
G S N+ N
Sbjct: 184 GKSPNTTN 191
>gi|170719319|ref|YP_001747007.1| extracellular solute-binding protein [Pseudomonas putida W619]
gi|169757322|gb|ACA70638.1| extracellular solute-binding protein family 1 [Pseudomonas putida
W619]
Length = 367
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTR----GKIWAAPYRWGAMM 87
D+V + +L+ IE + +P+ + +W K G +A PY +G ++
Sbjct: 78 DVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDPGNKFAVPYMYGTVL 137
Query: 88 IAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 140
I + K + D AP++ W L++ E + +++++SP E++ L+Y+G N
Sbjct: 138 IGFNPDKVKAVLGDTAPVDSWDLLFKEENIAKLKQCGVALLDSPSEILPLALQYLGLDPN 197
Query: 141 SNNID 145
S+ D
Sbjct: 198 SSKPD 202
>gi|224476217|ref|YP_002633823.1| putative spermidine/putrescine-binding protein PotD [Staphylococcus
carnosus subsp. carnosus TM300]
gi|222420824|emb|CAL27638.1| putative spermidine/putrescine-binding protein precursor PotD
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 357
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY +G + I Y K+ + K D W+ L+ P+ I +V+ RE++G L
Sbjct: 128 RHNRYSVPYFFGTVGIIYNKNAYPKEDFT---SWRSLYNPKFKNDIILVDGAREIMGMSL 184
Query: 133 KYMGASYNSNN 143
+G S N N
Sbjct: 185 NKLGYSLNDTN 195
>gi|219871497|ref|YP_002475872.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus parasuis SH0165]
gi|219691701|gb|ACL32924.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus parasuis SH0165]
Length = 349
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY +G I S D + I W DLW+PE G++ ++N REV L G
Sbjct: 126 YSLPYVYGLTGIGVNASDI---DPSTITSWGDLWKPEFKGKVLLMNDSREVFHMALLLDG 182
Query: 137 ASYNSNNID 145
S N+ N D
Sbjct: 183 KSPNTTNAD 191
>gi|191637951|ref|YP_001987117.1| Spermidine/putrescine ABC transporter substrate-binding protein
[Lactobacillus casei BL23]
gi|227535515|ref|ZP_03965564.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, substrate binding protein [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|385819695|ref|YP_005856082.1| Spermidine/putrescine-binding periplasmic protein PotD
[Lactobacillus casei LC2W]
gi|385822852|ref|YP_005859194.1| Spermidine/putrescine-binding periplasmic protein PotD
[Lactobacillus casei BD-II]
gi|409996811|ref|YP_006751212.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
casei W56]
gi|417983085|ref|ZP_12623727.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
21/1]
gi|417995787|ref|ZP_12636074.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
M36]
gi|417998724|ref|ZP_12638939.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
T71499]
gi|418001619|ref|ZP_12641758.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
UCD174]
gi|418007615|ref|ZP_12647494.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
UW4]
gi|418010422|ref|ZP_12650199.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
Lc-10]
gi|418013381|ref|ZP_12653025.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
Lpc-37]
gi|190712253|emb|CAQ66259.1| Spermidine/putrescine ABC transporter, substrate binding protein
[Lactobacillus casei BL23]
gi|227186837|gb|EEI66904.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, substrate binding protein [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|327382022|gb|AEA53498.1| Spermidine/putrescine-binding periplasmic protein PotD
[Lactobacillus casei LC2W]
gi|327385179|gb|AEA56653.1| Spermidine/putrescine-binding periplasmic protein PotD
[Lactobacillus casei BD-II]
gi|406357823|emb|CCK22093.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
casei W56]
gi|410528866|gb|EKQ03704.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
21/1]
gi|410536491|gb|EKQ11084.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
M36]
gi|410540328|gb|EKQ14843.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
T71499]
gi|410546213|gb|EKQ20477.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
UCD174]
gi|410548530|gb|EKQ22727.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
UW4]
gi|410553911|gb|EKQ27899.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
Lc-10]
gi|410555907|gb|EKQ29838.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
Lpc-37]
Length = 357
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY WG + I Y KF K + ++ W LW P+ I +++S R+V L
Sbjct: 128 RNNKYSIPYFWGTLGIIYN-DKFVK--ASEVQHWDQLWNPKFKDSIMLIDSARDVFAPAL 184
Query: 133 KYMGASYNSNN 143
MG S N N
Sbjct: 185 ISMGKSVNETN 195
>gi|110799081|ref|YP_696650.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Clostridium perfringens ATCC 13124]
gi|168208672|ref|ZP_02634297.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens B str. ATCC 3626]
gi|168215597|ref|ZP_02641222.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens NCTC 8239]
gi|182624392|ref|ZP_02952176.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens D str. JGS1721]
gi|110673728|gb|ABG82715.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens ATCC 13124]
gi|170713086|gb|EDT25268.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens B str. ATCC 3626]
gi|177910395|gb|EDT72772.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens D str. JGS1721]
gi|182382380|gb|EDT79859.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens NCTC 8239]
Length = 360
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + P++ W LW P+ ++ M +S R+ + K +G
Sbjct: 135 YSVPYMWGTVGIIYNTKRVSD----PVDSWNILWNPKYKDQVIMPDSVRDAMAVAEKKLG 190
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S N+ N+D A K + Q
Sbjct: 191 YSLNTENLDQIEAAKKELMTQ 211
>gi|116494513|ref|YP_806247.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
casei ATCC 334]
gi|116104663|gb|ABJ69805.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
casei ATCC 334]
Length = 357
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY WG + I Y KF K + ++ W LW P+ I +++S R+V L
Sbjct: 128 RNNKYSIPYFWGTLGIIYN-DKFVK--ASEVQHWDQLWNPKFKDSIMLIDSARDVFAPAL 184
Query: 133 KYMGASYNSNN 143
MG S N N
Sbjct: 185 ISMGKSVNETN 195
>gi|170717788|ref|YP_001784852.1| extracellular solute-binding protein [Haemophilus somnus 2336]
gi|168825917|gb|ACA31288.1| extracellular solute-binding protein family 1 [Haemophilus somnus
2336]
Length = 348
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ P +GA I Y L + W DLW PE A ++ M++ PRE+ L
Sbjct: 121 KGNKYSLPQLFGATGIGYNTDSQNPEQL---QSWGDLWNPEFANKLQMLDDPRELFNIAL 177
Query: 133 KYMGASYNSNN 143
MG + N+ +
Sbjct: 178 LKMGENPNTQD 188
>gi|168204845|ref|ZP_02630850.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens E str. JGS1987]
gi|169343777|ref|ZP_02864776.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens C str. JGS1495]
gi|422346637|ref|ZP_16427551.1| hypothetical protein HMPREF9476_01624 [Clostridium perfringens
WAL-14572]
gi|422874887|ref|ZP_16921372.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens F262]
gi|169298337|gb|EDS80427.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens C str. JGS1495]
gi|170663543|gb|EDT16226.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens E str. JGS1987]
gi|373226182|gb|EHP48509.1| hypothetical protein HMPREF9476_01624 [Clostridium perfringens
WAL-14572]
gi|380304161|gb|EIA16452.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens F262]
Length = 360
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + P++ W LW P+ ++ M +S R+ + K +G
Sbjct: 135 YSVPYMWGTVGIIYNTKRVSD----PVDSWNILWNPKYKDQVIMPDSVRDAMAVAEKKLG 190
Query: 137 ASYNSNNIDSQVAGGKVAVQQ 157
S N+ N+D A K + Q
Sbjct: 191 YSLNTENLDQIEAAKKELMTQ 211
>gi|253316355|ref|ZP_04839568.1| spermidine/putrescine-binding protein precursor-like protein
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
Length = 357
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY +G + I Y K K+ + WK L+ P+ ++ +V+ RE+IG L
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQVLLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|257874990|ref|ZP_05654643.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
gi|257809156|gb|EEV37976.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
Length = 359
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 19 NKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPI-----AGGEDQDWFKCLSHKWKRTR 73
K+K + Y DLV + + IE+ L+ P+ G ED F + +
Sbjct: 78 TKIKQGGSRY---DLVFPSESIIPKMIEEGLLVPLDHQKLTGTEDLSPF-LMDQAFDPDN 133
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
++ PY WG + I + + D++ I W DLW P + MV+ RE +G L+
Sbjct: 134 --TYSIPYFWGTIGIM---ANTEEVDVSSIHGWSDLWVPAFKNDVLMVDGARETLGIALQ 188
Query: 134 YMGASYNSNN 143
+G S N +
Sbjct: 189 TLGLSQNEKD 198
>gi|398985680|ref|ZP_10691177.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399016239|ref|ZP_10718472.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398105973|gb|EJL96037.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398153837|gb|EJM42330.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 367
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 80 PYRWGAMMIAYKKSKFRKHDL-APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 133
PY WG + + Y + + ++ AP+ L++PELA + ISM++SP E + VL
Sbjct: 130 PYTWGTIGLTYNEEQIKQRMADAPVNSLDMLFKPELAAKFADCGISMIDSPDEALAVVLN 189
Query: 134 YMGASYNSNNIDSQVAGGKVAVQ 156
Y+G S + A ++ ++
Sbjct: 190 YLGRDPRSGKAEDLAAASELLMK 212
>gi|398920798|ref|ZP_10659510.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398167389|gb|EJM55454.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 366
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKF-RKHDLAPIEDWKDLWRPELAGR---- 117
K SH ++ + PY WG + + Y + ++ AP+ L++PELA +
Sbjct: 115 KLRSHYEHSSQATV---PYTWGTIGLTYNADQIAQRVPGAPVNSLDMLFKPELAAKFADC 171
Query: 118 -ISMVNSPREVIGSVLKYMG 136
ISM++SP EV+ VL Y+G
Sbjct: 172 GISMIDSPDEVLAVVLNYLG 191
>gi|228990391|ref|ZP_04150356.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
pseudomycoides DSM 12442]
gi|228996492|ref|ZP_04156131.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock3-17]
gi|229004143|ref|ZP_04161944.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock1-4]
gi|228757004|gb|EEM06248.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock1-4]
gi|228763124|gb|EEM12032.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock3-17]
gi|228768917|gb|EEM17515.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
pseudomycoides DSM 12442]
Length = 349
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
Y WG IAY K ++ AP W DLW + G ++++N REV+G LK G S N
Sbjct: 130 YTWGVTGIAYNKKYVKE---APTS-WSDLWNEKYKGHVTLLNDSREVLGVGLKKNGFS-N 184
Query: 141 SNNIDSQVAGGKVAVQQNL 159
S D+++ +Q+ L
Sbjct: 185 STQNDAELKTAAADLQKLL 203
>gi|170721034|ref|YP_001748722.1| extracellular solute-binding protein [Pseudomonas putida W619]
gi|169759037|gb|ACA72353.1| extracellular solute-binding protein family 1 [Pseudomonas putida
W619]
Length = 366
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 11 FNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWK 70
F++L K+ + Y D+V LS AI ++P+ D+ L+ +
Sbjct: 59 FDSLETAETKLLTGGSGY---DVVLSAGQHLSRAIASGALQPL----DKAQLPHLAGVGE 111
Query: 71 RTR--------GKIWAAPYRWGAMMIAYKKSKFR-KHDLAPIEDWKDLWRPELAGR---- 117
R G +A Y WG + Y++ + AP+ W L+ P++ +
Sbjct: 112 EFRQHMALYDPGNRYAGTYAWGTTGVGYQQQAVAARMGEAPVGSWAMLFDPQVVAKFADC 171
Query: 118 -ISMVNSPREVIGSVLKYMGASYNSNNID 145
+S++N P EV +V++YMG N ++
Sbjct: 172 GVSLLNDPNEVFAAVMRYMGLDINQQRLE 200
>gi|429210721|ref|ZP_19201887.1| polyamine transport protein [Pseudomonas sp. M1]
gi|428158135|gb|EKX04682.1| polyamine transport protein [Pseudomonas sp. M1]
Length = 366
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRT-----RGKIWAAPYRWGAM 86
D+V + +L+ I+ + +P+ + +W K L+ +T G +A PY WG +
Sbjct: 77 DVVVPSNSFLAKQIKAGVYQPLDRDKLPNW-KNLNPDIMKTLEVSDPGNKFAIPYMWGTI 135
Query: 87 MIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASY 139
I Y K + D AP++ W +++PE + +S ++SP E+I + L Y+G
Sbjct: 136 GIGYNPDKVKAALGDGAPVDSWDLVFKPENIQKLKQCGVSFLDSPTEMIPAALHYLGYKP 195
Query: 140 NSNN 143
+S +
Sbjct: 196 DSQD 199
>gi|374296236|ref|YP_005046427.1| spermidine/putrescine-binding periplasmic protein [Clostridium
clariflavum DSM 19732]
gi|359825730|gb|AEV68503.1| spermidine/putrescine-binding periplasmic protein [Clostridium
clariflavum DSM 19732]
Length = 354
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 62 FKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMV 121
FK L++ + I++ PY WG + I Y K + ++ W LW + G+I M+
Sbjct: 119 FKNLTYDPQN----IYSVPYMWGTLGIIYNKEMVDEE----VDSWDILWDNKYKGKIIMM 170
Query: 122 NSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQ 165
S R+ LK +G S NS N K V + A L Q
Sbjct: 171 ESVRDSFAVALKRLGYSLNSTN--------KTEVDEAFATLVEQ 206
>gi|326204713|ref|ZP_08194568.1| extracellular solute-binding protein family 1 [Clostridium
papyrosolvens DSM 2782]
gi|325985084|gb|EGD45925.1| extracellular solute-binding protein family 1 [Clostridium
papyrosolvens DSM 2782]
Length = 349
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 59 QDWFKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRI 118
++ FK LS K ++ PY WG + I Y K+ ++ P+ W LW + +I
Sbjct: 114 EEKFKNLSFDPKNE----YSVPYMWGTVGIIYNKTMVKE----PVNSWNILWDKKYDKQI 165
Query: 119 SMVNSPREVIGSVLKYMGASYNSNN 143
M++S R+ I LK +G S N+ N
Sbjct: 166 FMLDSQRDSIAVALKKLGYSLNTKN 190
>gi|239631272|ref|ZP_04674303.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|239525737|gb|EEQ64738.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
paracasei subsp. paracasei 8700:2]
Length = 357
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY WG + I Y KF K ++ W LW P+ I +++S R+V L
Sbjct: 128 RNNKYSIPYFWGTLGIIYN-DKFVK--ATEVQHWDQLWNPKFKDSIMLIDSARDVFAPAL 184
Query: 133 KYMGASYNSNN 143
MG S N N
Sbjct: 185 ISMGKSVNETN 195
>gi|398851455|ref|ZP_10608140.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398246695|gb|EJN32175.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 367
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 80 PYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 133
PY WG + + Y + + +K AP+ L++P+LA + ISM++SP E + VL
Sbjct: 130 PYTWGTIGLTYNEEQIKKRMPDAPVNSLDMLFKPDLAAKFADCGISMIDSPDEALAVVLN 189
Query: 134 YMGASYNSNNIDSQVAGGKVAVQ 156
Y+G S + A ++ ++
Sbjct: 190 YLGRDPRSGKAEDLAAASELLMK 212
>gi|325275111|ref|ZP_08141087.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
gi|324099754|gb|EGB97624.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
Length = 367
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTR----GKIWAAPYRWGAMM 87
D+V + +L+ IE + +P+ + +W K G +A PY +G ++
Sbjct: 78 DVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDPGNKFAVPYMYGTVL 137
Query: 88 IAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 140
I + +K + D AP++ W +++ E + +++++SP E++ L+Y+G N
Sbjct: 138 IGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDSPSEILPLALQYLGLPPN 197
Query: 141 SNN 143
S+N
Sbjct: 198 SDN 200
>gi|301066029|ref|YP_003788052.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
casei str. Zhang]
gi|417980214|ref|ZP_12620895.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
12A]
gi|300438436|gb|ADK18202.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
casei str. Zhang]
gi|410525441|gb|EKQ00343.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
12A]
Length = 357
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY WG + I Y KF K ++ W LW P+ I +++S R+V L
Sbjct: 128 RNNKYSIPYFWGTLGIIYN-DKFVK--ATEVQHWDQLWNPKFKDSIMLIDSARDVFAPAL 184
Query: 133 KYMGASYNSNN 143
MG S N N
Sbjct: 185 ISMGKSVNETN 195
>gi|341819856|emb|CCC56062.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella thailandensis
fsh4-2]
Length = 363
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y + + I W DLW+P+ I +++S R+++G L G
Sbjct: 138 YSIPYFWGTLGIVYNDKYVKPGE---ITTWHDLWQPKYKKNIMLIDSSRDIMGMALASSG 194
Query: 137 ASYNSNNI 144
S N+ +I
Sbjct: 195 QSVNTKSI 202
>gi|226314011|ref|YP_002773907.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus brevis NBRC 100599]
gi|226096961|dbj|BAH45403.1| spermidine/putrescine ABC transporter substrate binding protein
[Brevibacillus brevis NBRC 100599]
Length = 351
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 81 YRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 140
Y WG IAY K ++ + W DLW GR+ M+N PREV+G L G S +
Sbjct: 133 YTWGITGIAYNKKYVKETPTS----WNDLWNEAYKGRVIMLNDPREVMGMALIKNGFSNS 188
Query: 141 SNN 143
+ N
Sbjct: 189 TTN 191
>gi|149911832|ref|ZP_01900434.1| spermidine/putrescine ABC transporter,
periplasmicspermidine/putrescine-binding protein
[Moritella sp. PE36]
gi|149805085|gb|EDM65109.1| spermidine/putrescine ABC transporter,
periplasmicspermidine/putrescine-binding protein
[Moritella sp. PE36]
Length = 344
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WGA I + +L I W DLW P+ G++ + + RE+ LK
Sbjct: 117 GNRYSIPYIWGATGIGVNTANI---ELTSITSWTDLWDPKWEGQLLLTDDAREIFHMALK 173
Query: 134 YMGASYNSNN 143
G S N+ N
Sbjct: 174 IQGHSANTQN 183
>gi|126731473|ref|ZP_01747279.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Sagittula
stellata E-37]
gi|126708009|gb|EBA07069.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Sagittula
stellata E-37]
Length = 329
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 14/149 (9%)
Query: 2 NLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW 61
++ S+DG +N L K++A S+ Y D+ + +L I++ LIE G + +
Sbjct: 37 DVDVSVDGYTSNEDL-LTKLQAGSSGY---DIAAPSQHFLRIMIDEGLIENF-GADKLEA 91
Query: 62 FKCLSHKWKRT---RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPE--LAG 116
+ + ++ + ++ P +G A ++ P + K + PE LAG
Sbjct: 92 YGNIQEAYRNQWWDETQEYSIPLAYGTAGFAVNTDQYD----GPTDSLKYFFEPEGALAG 147
Query: 117 RISMVNSPREVIGSVLKYMGASYNSNNID 145
I+M++ P EV+G+ Y+G + S + D
Sbjct: 148 SIAMLSYPDEVVGAAQLYLGVPFCSEDPD 176
>gi|309806197|ref|ZP_07700213.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LactinV 03V1-b]
gi|329920012|ref|ZP_08276890.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners
SPIN 1401G]
gi|308167416|gb|EFO69579.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LactinV 03V1-b]
gi|328936783|gb|EGG33223.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners
SPIN 1401G]
Length = 250
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y KF K + I+ W DLW+ + +I +V+S R+++G L
Sbjct: 22 GNNYSIPYFWGTLGIIYN-DKFVK--MGEIKHWNDLWKSKFKHQILLVDSARDIMGLSLI 78
Query: 134 YMGASYNS 141
M S NS
Sbjct: 79 SMKNSVNS 86
>gi|157375543|ref|YP_001474143.1| putrescine-binding periplasmic protein [Shewanella sediminis
HAW-EB3]
gi|157317917|gb|ABV37015.1| putrescine-binding periplasmic protein precursor [Shewanella
sediminis HAW-EB3]
Length = 362
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWF----KCLSHKWKRTRGKIWAAPYRWGAMM 87
DLV +L I+ + +P+ +++ K L G A PY WG
Sbjct: 74 DLVVSSGSFLQRQIKVGVFQPLDKSRLKNYHHLDPKVLDIVASFDEGNQHAIPYMWGTTG 133
Query: 88 IAYKKSKFRK-HDLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 141
I Y K K P+ W+ L++ ++ + ++MV++P EV+ ++LKY+G + NS
Sbjct: 134 IGYNIDKVSKILGNKPVNTWELLFQVDIVSKFTDCGVAMVDAPSEVVSAMLKYLGKNPNS 193
Query: 142 NNI 144
++
Sbjct: 194 QDL 196
>gi|148378565|ref|YP_001253106.1| spermidine/putrescine ABC transporter permease [Clostridium
botulinum A str. ATCC 3502]
gi|153932323|ref|YP_001382953.1| spermidine/putrescine ABC transporter
permease/spermidine/putrescine-binding protein
[Clostridium botulinum A str. ATCC 19397]
gi|153936910|ref|YP_001386501.1| spermidine/putrescine ABC transporter
permease/spermidine/putrescine-binding protein
[Clostridium botulinum A str. Hall]
gi|148288049|emb|CAL82117.1| spermidine/putrescine transport system permease protein
[Clostridium botulinum A str. ATCC 3502]
gi|152928367|gb|ABS33867.1| spermidine/putrescine transport system permease protein
PotC/spermidine/putrescine-binding periplasmic protein
PotD [Clostridium botulinum A str. ATCC 19397]
gi|152932824|gb|ABS38323.1| spermidine/putrescine transport system permease protein
PotC/spermidine/putrescine-binding periplasmic protein
PotD [Clostridium botulinum A str. Hall]
Length = 613
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRG------KIWAAPYRWGA 85
DLV D + +++LI+PI D++ L++ K ++ PY WG
Sbjct: 343 DLVVTSDYAIEIMTKQKLIQPI----DKNNVPNLANIDKNVLDLAFDPKNTYSLPYMWGG 398
Query: 86 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
I K+K K I + DLW E + +++ PR +IG L+ G S NS N
Sbjct: 399 NNIVIDKTKITKK----ITSFDDLWDSEFKNSMVILDDPRVMIGLALQKNGYSINSKN 452
>gi|262275716|ref|ZP_06053525.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Grimontia hollisae CIP 101886]
gi|262219524|gb|EEY70840.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Grimontia hollisae CIP 101886]
Length = 346
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WGA I K + + W DLW PE G++ M++ RE L+ +G
Sbjct: 123 YSVPYIWGATGIGVNTDFMDK---STVNAWADLWNPEYKGQLLMMDDAREFFHIALRKLG 179
Query: 137 ASYNSNNID 145
S NS N D
Sbjct: 180 YSANSTNPD 188
>gi|168177928|ref|ZP_02612592.1| putative spermidine/putrescine ABC transporter, permease
protein/spermidine/putrescine-binding protein
[Clostridium botulinum NCTC 2916]
gi|226947815|ref|YP_002802906.1| spermidine/putrescine transport system permease
PotC/spermidine/putrescine-binding periplasmic protein
PotD [Clostridium botulinum A2 str. Kyoto]
gi|182671055|gb|EDT83029.1| putative spermidine/putrescine ABC transporter, permease
protein/spermidine/putrescine-binding protein
[Clostridium botulinum NCTC 2916]
gi|226842975|gb|ACO85641.1| spermidine/putrescine transport system permease protein
PotC/spermidine/putrescine-binding periplasmic protein
PotD [Clostridium botulinum A2 str. Kyoto]
Length = 614
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRG------KIWAAPYRWGA 85
DLV D + +++LI+PI D++ L++ K ++ PY WG
Sbjct: 344 DLVVTSDYAIEIMTKQKLIQPI----DKNNVPNLANIDKNVLDLAFDPKNTYSLPYMWGG 399
Query: 86 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
I K+K K I + DLW E + +++ PR +IG L+ G S NS N
Sbjct: 400 NNIVIDKTKITKK----ITSFDDLWDSEFKNSMVILDDPRVMIGLALQKNGYSINSKN 453
>gi|423694387|ref|ZP_17668907.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens SS101]
gi|388000380|gb|EIK61709.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens SS101]
Length = 363
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWF----KCLSHKWKRTRGKIWAAPYRWGAMM 87
D+V + +L+ IE + +P+ + +W K + G +A PY +G ++
Sbjct: 74 DVVVPSNVFLAKQIEAGVFQPLDRSQLPNWNHLDPKLMKLIEANDPGNQYAVPYMYGTIL 133
Query: 88 IAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 140
I + +K + D AP++ W +++ E + +++++SP E++ L+++G N
Sbjct: 134 IGFNPAKVKAALGDNAPVDSWDLIFKEENISKLKQCGVALLDSPSEILPLALQHLGLDPN 193
Query: 141 SNN 143
S+N
Sbjct: 194 SSN 196
>gi|387816813|ref|YP_005677157.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) / Spermidine Putrescine ABC
transporter permease component potC (TC_3.A.1.11.1)
[Clostridium botulinum H04402 065]
gi|322804854|emb|CBZ02407.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) / Spermidine Putrescine ABC
transporter permease component potC (TC_3.A.1.11.1)
[Clostridium botulinum H04402 065]
Length = 614
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRG------KIWAAPYRWGA 85
DLV D + +++LI+PI D++ L++ K ++ PY WG
Sbjct: 344 DLVVTSDYAIEIMTKQKLIQPI----DKNNVPNLANIDKNVLDLAFDPKNTYSLPYMWGG 399
Query: 86 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
I K+K K I + DLW E + +++ PR +IG L+ G S NS N
Sbjct: 400 NNIVIDKTKITKK----ITSFDDLWDSEFKNSMVILDDPRVMIGLALQKNGYSINSKN 453
>gi|229160340|ref|ZP_04288338.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
R309803]
gi|228623064|gb|EEK79892.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
R309803]
Length = 349
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ P W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKE---VPTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKNG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS +D+++ +Q+ L
Sbjct: 182 FS-NSTKVDAELKTASNDLQKLL 203
>gi|52424864|ref|YP_088001.1| PotD protein [Mannheimia succiniciproducens MBEL55E]
gi|52306916|gb|AAU37416.1| PotD protein [Mannheimia succiniciproducens MBEL55E]
Length = 382
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ P GA IAY ++ D W DLW+PE AG++ +++ REV L +G
Sbjct: 158 YSLPQLLGAPGIAYNTQTYKGSDFT---SWGDLWKPEFAGKVQLLDDAREVFNIALLKLG 214
Query: 137 ASYNSNN 143
+ N+ +
Sbjct: 215 KNPNTQD 221
>gi|384460993|ref|YP_005673588.1| putative spermidine/putrescine ABC transporter
permease/spermidine/putrescine-binding protein
[Clostridium botulinum F str. 230613]
gi|295318010|gb|ADF98387.1| putative spermidine/putrescine ABC transporter, permease
protein/spermidine/putrescine-binding protein
[Clostridium botulinum F str. 230613]
Length = 614
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRG------KIWAAPYRWGA 85
DLV D + +++LI+PI D++ L++ K ++ PY WG
Sbjct: 344 DLVVTSDYAIEIMTKQKLIQPI----DKNNVPNLANIDKNVLDLAFDPKNTYSLPYMWGG 399
Query: 86 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
I K+K K I + DLW E + +++ PR +IG L+ G S NS N
Sbjct: 400 NNIVIDKTKITKK----ITSFDDLWDSEFKNSMVILDDPRVMIGLALQKNGYSINSKN 453
>gi|153939862|ref|YP_001389927.1| spermidine/putrescine ABC transporter
permease/spermidine/putrescine-binding protein
[Clostridium botulinum F str. Langeland]
gi|152935758|gb|ABS41256.1| putative spermidine/putrescine ABC transporter, permease
protein/spermidine/putrescine-binding protein
[Clostridium botulinum F str. Langeland]
Length = 613
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRG------KIWAAPYRWGA 85
DLV D + +++LI+PI D++ L++ K ++ PY WG
Sbjct: 343 DLVVTSDYAIEIMTKQKLIQPI----DKNNVPNLANIDKNVLDLAFDPKNTYSLPYMWGG 398
Query: 86 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN 143
I K+K K I + DLW E + +++ PR +IG L+ G S NS N
Sbjct: 399 NNIVIDKTKITKK----ITSFDDLWDSEFKNSMVILDDPRVMIGLALQKNGYSINSKN 452
>gi|422418309|ref|ZP_16495264.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL N1-067]
gi|422421436|ref|ZP_16498389.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL S4-171]
gi|313634214|gb|EFS00853.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL N1-067]
gi|313638842|gb|EFS03905.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL S4-171]
Length = 357
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ P+L +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWDALFDPDLKNQILLIDGAREVMGLGLNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|167856022|ref|ZP_02478767.1| hypothetical protein HPS_02738 [Haemophilus parasuis 29755]
gi|167852861|gb|EDS24130.1| hypothetical protein HPS_02738 [Haemophilus parasuis 29755]
Length = 349
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY +G I S D + I W DLW+PE G++ ++N REV L G
Sbjct: 126 YSLPYVYGLTGIGVNASDI---DPSTITSWGDLWKPEFKGKVLLMNDSREVFHIALLLDG 182
Query: 137 ASYNSNNID 145
S N+ N D
Sbjct: 183 KSPNTTNAD 191
>gi|113461191|ref|YP_719260.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
gi|112823234|gb|ABI25323.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
Length = 345
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ P +GA I Y L + W DLW PE A ++ M++ PRE+ L
Sbjct: 118 KGNKYSLPQLFGATGIGYNADNQNPEHL---QSWGDLWNPEFANKLQMLDDPRELFNIAL 174
Query: 133 KYMGASYNSNN 143
MG + N+ +
Sbjct: 175 LKMGENPNTQD 185
>gi|359781792|ref|ZP_09285015.1| polyamine transport protein [Pseudomonas psychrotolerans L19]
gi|359370162|gb|EHK70730.1| polyamine transport protein [Pseudomonas psychrotolerans L19]
Length = 365
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +A PY WG + I Y +K + D AP++ W +++PE + +++++SP E
Sbjct: 122 GNQYAIPYLWGTIGIGYNPAKVKAALGDNAPVDSWDLIFKPENLSKLKGCGVAVLDSPTE 181
Query: 127 VIGSVLKYMG 136
+I + L Y+G
Sbjct: 182 IIPAGLHYLG 191
>gi|347548214|ref|YP_004854542.1| putative spermidine/putrescine-binding protein [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346981285|emb|CBW85222.1| Putative spermidine/putrescine-binding protein [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 357
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ P+L +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWDALFDPDLKNQILLIDGAREVMGLGLNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|343516584|ref|ZP_08753619.1| spermidine/putrescine-binding periplasmic protein (SPBP) [Vibrio
sp. N418]
gi|342796169|gb|EGU31864.1| spermidine/putrescine-binding periplasmic protein (SPBP) [Vibrio
sp. N418]
Length = 342
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG+ I Y D + + W DLW E AG++ + + R+V+G L G
Sbjct: 121 YSLPYMWGSTAIGYNSEVI---DGSQLTGWADLWNSEYAGQLLLTDDVRDVMGMALILGG 177
Query: 137 ASYNSNNID 145
S NS + D
Sbjct: 178 HSVNSQDAD 186
>gi|381189999|ref|ZP_09897523.1| spermidine/putrescine-binding protein [Thermus sp. RL]
gi|380452029|gb|EIA39629.1| spermidine/putrescine-binding protein [Thermus sp. RL]
Length = 350
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPEL-AGRISMVNSPREVIGSVL 132
G ++ PY WG IAY++ P++ + L+ PE G +++ RE IG+ L
Sbjct: 124 GLQYSVPYLWGTTGIAYREDLVT----GPVDSYAVLFDPEAQVGPFLLLDEMRETIGAAL 179
Query: 133 KYMGASYNSNNIDS 146
KY+G S N+ + ++
Sbjct: 180 KYLGYSVNTTDPEA 193
>gi|333374713|ref|ZP_08466548.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Kingella kingae ATCC 23330]
gi|332974645|gb|EGK11562.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Kingella kingae ATCC 23330]
Length = 391
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK---HDLAPIEDWKDLWRPELAGR-----ISMVNSPR 125
G +A PY WG +A K + K D P +W ++ PE + IS +SP
Sbjct: 147 GNKYAVPYFWGINTLAINKEQVSKALGTDQLPENEWDLVFNPEYTAKLKSCGISFFDSPT 206
Query: 126 EVIGSVLKYMGASYNSNN 143
E +LKYMG NS N
Sbjct: 207 EQFPLILKYMGKDPNSEN 224
>gi|366159061|ref|ZP_09458923.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia sp. TW09308]
gi|432371595|ref|ZP_19614648.1| putrescine-binding periplasmic protein [Escherichia coli KTE11]
gi|430899033|gb|ELC21139.1| putrescine-binding periplasmic protein [Escherichia coli KTE11]
Length = 370
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 14/147 (9%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWF----KCL 65
+F++ + K+ A S + DLV +L + + +P+ + +W + L
Sbjct: 61 VFDSNEVLEGKLMAGSTGF---DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELL 117
Query: 66 SHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----I 118
K G +A PY W I Y K + + AP++ W + +PE + +
Sbjct: 118 KLVAKHDPGNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGV 177
Query: 119 SMVNSPREVIGSVLKYMGASYNSNNID 145
S +++P EV +VL Y+G NS D
Sbjct: 178 SFLDAPEEVFATVLNYLGKDPNSTKAD 204
>gi|339452319|ref|ZP_08655689.1| spermidine/putrescine ABC transporter, substrate binding protein
[Leuconostoc lactis KCTC 3528]
Length = 249
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
RG ++ PY WG + I Y D ++ W DLW P+ +I +V+S R+ +G L
Sbjct: 64 RGNKYSLPYFWGTLGIIYNDKIVDGKD---VQHWDDLWSPKFRNQILLVDSARDALGVAL 120
Query: 133 KYMGASYNSNNI 144
S N+ ++
Sbjct: 121 ITQHKSVNTKSV 132
>gi|294636071|ref|ZP_06714502.1| spermidine/putrescine-binding periplasmic protein PotD
[Edwardsiella tarda ATCC 23685]
gi|451964730|ref|ZP_21917992.1| spermidine/putrescine ABC transporter substrate-binding protein
[Edwardsiella tarda NBRC 105688]
gi|291090608|gb|EFE23169.1| spermidine/putrescine-binding periplasmic protein PotD
[Edwardsiella tarda ATCC 23685]
gi|451316307|dbj|GAC63354.1| spermidine/putrescine ABC transporter substrate-binding protein
[Edwardsiella tarda NBRC 105688]
Length = 352
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WGA I D A I W DLW+PE G + + + REV L+ +G
Sbjct: 129 YSIPYIWGATAIGVNSDAI---DPATITSWADLWKPEYKGSLLLTDDAREVFQIALRKLG 185
Query: 137 ASYNSNN 143
S N+ +
Sbjct: 186 YSGNTTD 192
>gi|443473513|ref|ZP_21063536.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
gi|442904323|gb|ELS29365.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
Length = 365
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 14/155 (9%)
Query: 2 NLCASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDW 61
N + +F++ + +K+ A + Y D+V V D L L++ + + +W
Sbjct: 49 NAILPVLDVFDDAEVMESKLMAGRSGY---DVVVVPDDLLPNFARAGLLQELDRSKLPNW 105
Query: 62 F----KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELA 115
+ ++ G +A PY WG I Y K R+ + AP++ W +++ E
Sbjct: 106 SHLAPEVMAKLEANDPGNRYAIPYMWGTTGIGYNVDKVRELLGENAPVDSWDLIFKQENI 165
Query: 116 GRIS-----MVNSPREVIGSVLKYMGASYNSNNID 145
++S M+++P E++ L Y+G NS N D
Sbjct: 166 AKLSQCGVAMLDAPVEILPIALHYLGLPANSQNPD 200
>gi|421766129|ref|ZP_16202907.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Lactococcus garvieae DCC43]
gi|407625499|gb|EKF52203.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Lactococcus garvieae DCC43]
Length = 355
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K+ P W+DLW E I + +S R+V+G L G
Sbjct: 133 YSVPYFWGTLGIVYND----KYITNPPTKWEDLWAKEYKNSILLTDSSRDVMGMSLIATG 188
Query: 137 ASYNSNNI 144
+S N+ N+
Sbjct: 189 SSVNTTNL 196
>gi|417986294|ref|ZP_12626866.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
32G]
gi|410526487|gb|EKQ01374.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
32G]
Length = 261
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY WG + I Y KF K + ++ W LW P+ I +++S R+V L
Sbjct: 32 RNNKYSIPYFWGTLGIIYN-DKFVK--ASEVQHWDQLWNPKFKDSIMLIDSARDVFAPAL 88
Query: 133 KYMGASYNSNN 143
MG S N N
Sbjct: 89 ISMGKSVNETN 99
>gi|307244111|ref|ZP_07526229.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Peptostreptococcus stomatis DSM 17678]
gi|306492482|gb|EFM64517.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Peptostreptococcus stomatis DSM 17678]
Length = 361
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K ++ ++ W LW + + I M +S R+ +G LK +G
Sbjct: 140 YSVPYMWGTLGIVYNKKMVKEK----VDSWDILWDEKYSRNILMFDSVRDTMGIALKKLG 195
Query: 137 ASYNSNNIDSQVAGGKVAVQQNLALL 162
S NS + D A + ++Q +L
Sbjct: 196 YSMNSVDKDQINAAKNLLIKQKPLVL 221
>gi|407478190|ref|YP_006792067.1| extracellular solute-binding protein family 1 [Exiguobacterium
antarcticum B7]
gi|407062269|gb|AFS71459.1| Extracellular solute-binding protein family 1 [Exiguobacterium
antarcticum B7]
Length = 357
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 16/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------ 71
K++ +Y D+ D ++ IE+ L+ PI DQ+ L + R
Sbjct: 74 LTKIEQGGTTY---DVAVPSDYAIAKMIEEDLVVPI----DQEKVPNLKNIDSRFLDLSF 126
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
G ++ PY WG + I Y + WKDLW P L +I + + REV+G
Sbjct: 127 DPGNRYSIPYFWGTVGIVYNQKLIGGKKPT---SWKDLWDPALKNQILLADGAREVMGMS 183
Query: 132 LKYMGASYNSNN 143
L +G S N +
Sbjct: 184 LNSLGYSLNETD 195
>gi|381182867|ref|ZP_09891648.1| extracellular solute-binding protein family 1 [Listeriaceae
bacterium TTU M1-001]
gi|380317249|gb|EIA20587.1| extracellular solute-binding protein family 1 [Listeriaceae
bacterium TTU M1-001]
Length = 357
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W LW +L +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKKMFPDKNF---DHWDSLWDKDLENQILLIDGAREVMGLGLNSLG 188
Query: 137 ASYNSNN 143
S N N
Sbjct: 189 YSLNDTN 195
>gi|291523023|emb|CBK81316.1| ABC-type spermidine/putrescine transport system, permease component
II [Coprococcus catus GD/7]
Length = 618
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 22/163 (13%)
Query: 4 CASIDGIFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFK 63
C I F + + + K++A A D++ D + I + ++PI DW
Sbjct: 322 CTVIYETFESNEMMYTKLQAGDAY----DILIPSDYMIERLIREDYLQPI------DW-D 370
Query: 64 CLSH---------KWKRTRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPEL 114
CL++ + G +++ PY WG + I Y K+ DL+ E W L +
Sbjct: 371 CLTNAEGLNPDVMNKEYDPGNVYSVPYFWGNVGILYDKTVVDPADLS--EGWNLLMDTKY 428
Query: 115 AGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQ 157
AG + M +S R+ LK +G S N+++ + A + +QQ
Sbjct: 429 AGNLYMYDSERDSFMIALKALGYSMNTHDKNEIQAAYEWLIQQ 471
>gi|448747704|ref|ZP_21729359.1| Bacterial periplasmic spermidine/putrescine-binding protein
[Halomonas titanicae BH1]
gi|445564647|gb|ELY20764.1| Bacterial periplasmic spermidine/putrescine-binding protein
[Halomonas titanicae BH1]
Length = 369
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGRIS-------MVNSP 124
G ++ PY WG I Y + ++ D AP++ W L+ PE+ +S M++S
Sbjct: 124 GSEYSVPYMWGTNGIGYNVDRVKEILGDDAPVDSWALLFDPEITSALSEAGCGLSMLDSA 183
Query: 125 REVIGSVLKYMGASYNSNNIDSQVAGGKVAVQ 156
E++ + Y+G S N+D A G++ +
Sbjct: 184 DEMLSPAMAYLGFDPLSENLDDIEAAGELIAE 215
>gi|410453778|ref|ZP_11307722.1| spermidine/putrescine import ABC transporter
spermidine/putrescine-binding protein PotD [Bacillus
bataviensis LMG 21833]
gi|409932824|gb|EKN69780.1| spermidine/putrescine import ABC transporter
spermidine/putrescine-binding protein PotD [Bacillus
bataviensis LMG 21833]
Length = 357
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y I W DLW P L +I +++ REV+G L
Sbjct: 129 GNKYSVPYFWGTVGIVYNPKMLNGKK---ITSWNDLWAPSLRNKILLIDGAREVMGMGLN 185
Query: 134 YMGASYN 140
+G S N
Sbjct: 186 SLGYSLN 192
>gi|387896447|ref|YP_006326744.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas fluorescens A506]
gi|387161548|gb|AFJ56747.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens A506]
Length = 363
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIAGGEDQDWF----KCLSHKWKRTRGKIWAAPYRWGAMM 87
D+V + +L+ IE + +P+ + +W K + G +A PY +G ++
Sbjct: 74 DVVVPSNVFLAKQIEAGVFQPLDRSQLPNWNHLDPKLMKLIEANDPGNQYAVPYMYGTIL 133
Query: 88 IAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 140
I + +K + D AP++ W +++ E + +++++SP E++ L+++G N
Sbjct: 134 IGFNPAKVKAALGDNAPVDSWDLIFKEENISKLKQCGVALLDSPSEILPLALQHLGLDPN 193
Query: 141 SNN 143
S+N
Sbjct: 194 SSN 196
>gi|358065959|ref|ZP_09152493.1| hypothetical protein HMPREF9473_04556 [Clostridium hathewayi
WAL-18680]
gi|356695822|gb|EHI57447.1| hypothetical protein HMPREF9473_04556 [Clostridium hathewayi
WAL-18680]
Length = 363
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y S D+ W DLW + +G I M +S R+ LK +G
Sbjct: 133 YSVPYCWGTVGILYNTSMVAPEDVPT--KWSDLWNDKFSGEILMQDSVRDAFMVALKSLG 190
Query: 137 ASYNSNN 143
S N+ N
Sbjct: 191 YSMNTTN 197
>gi|172058529|ref|YP_001814989.1| extracellular solute-binding protein [Exiguobacterium sibiricum
255-15]
gi|171991050|gb|ACB61972.1| extracellular solute-binding protein family 1 [Exiguobacterium
sibiricum 255-15]
Length = 357
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 16/132 (12%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKR------ 71
K++ +Y D+ D ++ IE+ L+ PI DQ L + R
Sbjct: 74 LTKIEQGGTTY---DIAVPSDYAIAKMIEEDLVLPI----DQQKIPNLKNIDPRFLDLSF 126
Query: 72 TRGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 131
G ++ PY WG + I Y + + D WKD+W P L +I + + REV+G
Sbjct: 127 DPGNKYSIPYFWGTVGIVYNQ---KLIDGKKPTSWKDIWDPALKNQILLADGAREVMGMS 183
Query: 132 LKYMGASYNSNN 143
L +G S N +
Sbjct: 184 LNSLGYSLNETD 195
>gi|315302123|ref|ZP_07873078.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
ivanovii FSL F6-596]
gi|313629511|gb|EFR97689.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
ivanovii FSL F6-596]
Length = 353
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ PY WG + I Y K F + + W L+ P+L +I +++ REV+G L +G
Sbjct: 128 YSMPYFWGTLGIIYNKKMFPDKNF---DTWDALFDPDLKNQILLIDGAREVMGLGLNSLG 184
Query: 137 ASYNSNN 143
S N N
Sbjct: 185 YSLNDTN 191
>gi|148825225|ref|YP_001289978.1| cytoplasmic sugar-binding protein [Haemophilus influenzae PittEE]
gi|229846583|ref|ZP_04466691.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
7P49H1]
gi|148715385|gb|ABQ97595.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
PittEE]
gi|229810676|gb|EEP46394.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
7P49H1]
Length = 350
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRG--K 75
+ K+K + + DLV +++ I++++++PI + + + H +
Sbjct: 67 YAKLKLTQNTGSSYDLVFPSSYYVNKMIKEKMLQPIDQSKLTNIHQIPKHLLNKEFDPEN 126
Query: 76 IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 135
++ PY +G I + D I W DLW+PE G++ M + REV L
Sbjct: 127 KYSLPYVYGLTGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLD 183
Query: 136 GASYNSNN 143
G S N+ N
Sbjct: 184 GKSPNTTN 191
>gi|68249097|ref|YP_248209.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae 86-028NP]
gi|260582237|ref|ZP_05850030.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae NT127]
gi|68057296|gb|AAX87549.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae 86-028NP]
gi|260094605|gb|EEW78500.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae NT127]
Length = 350
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRG--K 75
+ K+K + + DLV +++ I++++++PI + + + H +
Sbjct: 67 YAKLKLTQNTGSSYDLVFPSSYYINKMIKEKMLQPIDQSKLTNIHQIPKHLLNKEFDPEN 126
Query: 76 IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 135
++ PY +G I + D I W DLW+PE G++ M + REV L
Sbjct: 127 KYSLPYVYGLTGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLD 183
Query: 136 GASYNSNN 143
G S N+ N
Sbjct: 184 GKSPNTTN 191
>gi|409427814|ref|ZP_11262304.1| extracellular solute-binding protein [Pseudomonas sp. HYS]
Length = 359
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 58 DQDWFKCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRKH-DLAPIEDWKDLWRPELAG 116
DQD L+ G +A PY WG + + R+ AP++ L++PE A
Sbjct: 104 DQDLLAKLAEV---DPGNRYAVPYTWGTLGLGMNLEAVRQRLGDAPLDSLDLLFKPEYAS 160
Query: 117 R-----ISMVNSPREVIGSVLKYMG 136
+ I+M +SP+EVIG L Y+G
Sbjct: 161 KLKDCGIAMSDSPQEVIGVALNYLG 185
>gi|423472737|ref|ZP_17449480.1| hypothetical protein IEM_04042 [Bacillus cereus BAG6O-2]
gi|402427298|gb|EJV59407.1| hypothetical protein IEM_04042 [Bacillus cereus BAG6O-2]
Length = 349
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ + W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKETPTS----WNDLWNEKYKGHVTLLNDSREVLGMGLKKNG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKEDAQLKTASNDLQKLL 203
>gi|304405421|ref|ZP_07387080.1| extracellular solute-binding protein family 1 [Paenibacillus
curdlanolyticus YK9]
gi|304345460|gb|EFM11295.1| extracellular solute-binding protein family 1 [Paenibacillus
curdlanolyticus YK9]
Length = 357
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 133
G ++ PY WG + I Y D I W DLW P L +I +V+ REV+G L
Sbjct: 129 GNAYSIPYFWGTVGIIYNPDLL---DGWQITSWNDLWDPRLRNQILLVDGAREVMGFGLN 185
Query: 134 YMGASYNSNNID 145
+ S N N D
Sbjct: 186 SLHFSLNDTNED 197
>gi|423481266|ref|ZP_17457956.1| hypothetical protein IEQ_01044 [Bacillus cereus BAG6X1-2]
gi|401146026|gb|EJQ53546.1| hypothetical protein IEQ_01044 [Bacillus cereus BAG6X1-2]
Length = 349
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ + W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKETPTS----WNDLWNEKYKGHVTLLNDSREVLGMGLKKNG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKEDAQLKTASNDLQKLL 203
>gi|429213097|ref|ZP_19204262.1| polyamine transport protein [Pseudomonas sp. M1]
gi|428157579|gb|EKX04127.1| polyamine transport protein [Pseudomonas sp. M1]
Length = 366
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +A PY WG + + Y K + D AP++ W +++PE + +S ++SP E
Sbjct: 123 GNKFAIPYMWGTIGLGYNPDKVKAVLGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTE 182
Query: 127 VIGSVLKYMGASYNSNN 143
++ + L Y+G +SN+
Sbjct: 183 MLPAALHYLGYKPDSND 199
>gi|152980620|ref|YP_001354793.1| spermidine/putrescine transport system substrate-binding protein
[Janthinobacterium sp. Marseille]
gi|151280697|gb|ABR89107.1| spermidine/putrescine transport system substrate-binding protein
[Janthinobacterium sp. Marseille]
Length = 353
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 62 FKCLSHKWKRT---RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRP----EL 114
FK L+ ++ T +G ++ PY + ++ Y + K ++ + P++ W ++ P ++
Sbjct: 100 FKNLNPQYLNTDFDKGNQYSVPYAYTITLLGYNEQKMKELGI-PVDSWAAIFDPAILAKI 158
Query: 115 AGRISMVNSPREVIGSVLKYMGASYNSNN 143
G++++++S E++ + LKY+G S N +
Sbjct: 159 KGKVTVLDSANELMAAALKYLGYSVNDTD 187
>gi|398862714|ref|ZP_10618305.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398250080|gb|EJN35433.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 367
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G +A PY WG I Y K R D AP++ W +++ E + ++M++SP E
Sbjct: 124 GNQYAVPYLWGTNGIGYNVDKVRAALGDKAPVDSWDLVFKEENLAKLGECGVAMLDSPAE 183
Query: 127 VIGSVLKYMGASYNSNN 143
++ L Y+G NS N
Sbjct: 184 MLPVALHYLGLPPNSTN 200
>gi|420136862|ref|ZP_14644876.1| polyamine transport protein, partial [Pseudomonas aeruginosa CIG1]
gi|403250386|gb|EJY63828.1| polyamine transport protein, partial [Pseudomonas aeruginosa CIG1]
Length = 237
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G A PY WG + I Y K + D AP++ W +++PE + +S ++SP E
Sbjct: 124 GNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTE 183
Query: 127 VIGSVLKYMGASYNSNN 143
++ + L Y+G +++N
Sbjct: 184 ILPAALHYLGYKPDTDN 200
>gi|423555852|ref|ZP_17532155.1| hypothetical protein II3_01057 [Bacillus cereus MC67]
gi|401196194|gb|EJR03140.1| hypothetical protein II3_01057 [Bacillus cereus MC67]
Length = 349
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ + W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKETPTS----WNDLWNEKYKGHVTLLNDSREVLGMGLKKNG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKEDAQLKTASNDLQKLL 203
>gi|423455165|ref|ZP_17432018.1| hypothetical protein IEE_03909 [Bacillus cereus BAG5X1-1]
gi|401134948|gb|EJQ42555.1| hypothetical protein IEE_03909 [Bacillus cereus BAG5X1-1]
Length = 349
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 77 WAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 136
++ Y WG IAY K ++ + W DLW + G ++++N REV+G LK G
Sbjct: 126 YSLVYTWGVTGIAYNKKYVKETPTS----WNDLWNEKYKGHVTLLNDSREVLGMGLKKNG 181
Query: 137 ASYNSNNIDSQVAGGKVAVQQNL 159
S NS D+Q+ +Q+ L
Sbjct: 182 FS-NSTKEDAQLKTASNDLQKLL 203
>gi|392382440|ref|YP_005031637.1| putrescine ABC transporter, periplasmic binding protein
[Azospirillum brasilense Sp245]
gi|356877405|emb|CCC98239.1| putrescine ABC transporter, periplasmic binding protein
[Azospirillum brasilense Sp245]
Length = 366
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 18/145 (12%)
Query: 10 IFNNLSLPFNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGE-------DQDWF 62
++++L L KV + Y +V +P LS I+ +++ P+ + D
Sbjct: 58 LYDSLELLEQKVLVGKSGYDV--IVPTAEPTLSRMIQAKVVAPLDKAKIPNLKNVDPKVL 115
Query: 63 KCLSHKWKRTRGKIWAAPYRWGAMMIAYKKSKFRK-HDLAPIEDWKDLWRPELAGR---- 117
K L + G +A PY G + IA K + P++ W +++PE+A +
Sbjct: 116 KLLEN---SDPGNKFAVPYLGGTVGIAIIPEKIKAVAPDVPLDSWDLIFKPEVAKKVAAC 172
Query: 118 -ISMVNSPREVIGSVLKYMGASYNS 141
I++++S +VI SVL Y+G NS
Sbjct: 173 GITVMDSAIDVIPSVLNYLGLDPNS 197
>gi|26988919|ref|NP_744344.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
putida KT2440]
gi|24983731|gb|AAN67808.1|AE016412_1 periplasmic polyamine-binding protein, putative [Pseudomonas putida
KT2440]
Length = 362
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 18/139 (12%)
Query: 32 DLVSVGDPWLSFAIEKRLIEPIA-------GGEDQDWFKCLSHKWKRTRGKIWAAPYRWG 84
D+V L+ A++ ++P+ G D+D L+ G A PY WG
Sbjct: 74 DVVVPSSTVLARALKAHALQPLDAQAMPGYGNLDKDLLGKLAEV---DPGNRHAVPYTWG 130
Query: 85 AMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGA 137
+ + R+ D+ P++ L++PE A R I++ +SP+EVIG L Y+G
Sbjct: 131 TLGLGVNVEAVRQRLGDV-PLDSLDLLFKPEYATRLKGCGIALPDSPQEVIGVALNYLGK 189
Query: 138 SYNSNNIDSQVAGGKVAVQ 156
S N D A + Q
Sbjct: 190 DPYSQNKDDLAAAQNLLSQ 208
>gi|319897986|ref|YP_004136183.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae F3031]
gi|317433492|emb|CBY81875.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae F3031]
Length = 350
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 18 FNKVKAKSASYMAADLVSVGDPWLSFAIEKRLIEPIAGGEDQDWFKCLSHKWKRTRG--K 75
+ K+K + + DLV +++ I++++++PI + + + H +
Sbjct: 67 YAKLKLTQNTGSSYDLVFPSSYYVNKMIKEKMLQPIDQSKLTNIHQIPKHLLNKEFDPEN 126
Query: 76 IWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 135
++ PY +G I + D I W DLW+PE G++ M + REV L
Sbjct: 127 KYSLPYVYGLTGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLD 183
Query: 136 GASYNSNN 143
G S N+ N
Sbjct: 184 GKSPNTTN 191
>gi|296388939|ref|ZP_06878414.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PAb1]
gi|416872574|ref|ZP_11916778.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 152504]
gi|416872715|ref|ZP_11916895.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 152504]
gi|416872994|ref|ZP_11917137.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 152504]
gi|334845479|gb|EGM24041.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 152504]
gi|334845702|gb|EGM24262.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 152504]
gi|334845812|gb|EGM24371.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 152504]
Length = 367
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRK--HDLAPIEDWKDLWRPELAGRIS-----MVNSPRE 126
G +A PY WG IAY K RK AP++ W +++ E R+S ++S E
Sbjct: 124 GNRYAVPYLWGTTGIAYDVDKVRKLLGPDAPVDSWDLVFKEENISRLSQCGVATLDSSTE 183
Query: 127 VIGSVLKYMGASYNSNN 143
++ L Y+G +NS N
Sbjct: 184 LVSIALNYLGLPHNSQN 200
>gi|417796275|ref|ZP_12443490.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21305]
gi|334269774|gb|EGL88187.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21305]
Length = 357
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
R ++ PY +G + I Y K K+ + WK L+ P+ +I +V+ RE+IG L
Sbjct: 128 RDNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 133 KYMGASYNSNN 143
+G + N N
Sbjct: 185 NKLGYNLNDRN 195
>gi|407789477|ref|ZP_11136578.1| spermidine/putrescine-binding periplasmic protein [Gallaecimonas
xiamenensis 3-C-1]
gi|407206835|gb|EKE76785.1| spermidine/putrescine-binding periplasmic protein [Gallaecimonas
xiamenensis 3-C-1]
Length = 347
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 73 RGKIWAAPYRWGAMMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 132
+G ++ PY WG+ I + D I WKDL++PE GR+ + + REV L
Sbjct: 120 KGNQYSVPYFWGSTSIGVNAEEI---DPKTITSWKDLFKPEFKGRLLLTDDVREVFQIGL 176
Query: 133 KYMGASYNSNN 143
G S N+ +
Sbjct: 177 ALNGHSANTTD 187
>gi|381352983|pdb|3TTK|A Chain A, Crystal Structure Of Apo-Spud
gi|381352984|pdb|3TTK|B Chain B, Crystal Structure Of Apo-Spud
gi|381352985|pdb|3TTK|C Chain C, Crystal Structure Of Apo-Spud
Length = 345
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 74 GKIWAAPYRWGAMMIAYKKSKFRKH--DLAPIEDWKDLWRPELAGR-----ISMVNSPRE 126
G A PY WG + I Y K + D AP++ W +++PE + +S ++SP E
Sbjct: 104 GNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTE 163
Query: 127 VIGSVLKYMGASYNSNN 143
++ + L Y+G +++N
Sbjct: 164 ILPAALHYLGYKPDTDN 180
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,667,198,952
Number of Sequences: 23463169
Number of extensions: 103715489
Number of successful extensions: 210712
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 2029
Number of HSP's that attempted gapping in prelim test: 208154
Number of HSP's gapped (non-prelim): 3042
length of query: 165
length of database: 8,064,228,071
effective HSP length: 126
effective length of query: 39
effective length of database: 9,402,836,073
effective search space: 366710606847
effective search space used: 366710606847
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)