Query 040877
Match_columns 281
No_of_seqs 175 out of 1127
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 20:44:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040877.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040877hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wfj_A Putative elicitor-respo 99.9 2.7E-24 9.1E-29 174.3 14.6 122 3-145 9-130 (136)
2 2dmh_A Myoferlin; beta-sandwic 99.9 5E-23 1.7E-27 167.5 17.3 124 3-145 6-133 (140)
3 2ep6_A MCTP2 protein; beta san 99.9 1E-22 3.5E-27 164.9 11.9 118 3-144 12-131 (133)
4 3m7f_B E3 ubiquitin-protein li 99.9 3.5E-22 1.2E-26 169.7 15.1 130 3-145 7-141 (176)
5 3b7y_A E3 ubiquitin-protein li 99.9 4E-22 1.4E-26 164.7 14.9 130 3-145 19-153 (153)
6 1gmi_A Protein kinase C, epsil 99.9 3.5E-22 1.2E-26 162.8 13.3 118 3-145 5-133 (136)
7 2nq3_A Itchy homolog E3 ubiqui 99.9 1.2E-21 4E-26 168.1 15.9 124 3-146 35-162 (173)
8 3kwu_A MUNC13-1; calcium bindi 99.9 2.1E-21 7E-26 159.6 16.2 118 3-144 16-146 (148)
9 3pyc_A E3 ubiquitin-protein li 99.9 1.4E-21 4.7E-26 158.0 14.6 123 1-143 2-131 (132)
10 2fk9_A Protein kinase C, ETA t 99.9 7E-22 2.4E-26 168.2 13.1 118 3-144 28-156 (157)
11 2cjt_A UNC-13 homolog A, MUNC1 99.9 1.3E-21 4.5E-26 160.5 12.3 120 1-144 2-131 (131)
12 1rlw_A Phospholipase A2, CALB 99.9 3.1E-21 1.1E-25 154.0 13.1 119 3-143 2-123 (126)
13 2b3r_A Phosphatidylinositol-4- 99.8 6.4E-20 2.2E-24 149.7 13.6 111 3-128 19-130 (134)
14 1a25_A CALB, protein kinase C 99.8 1.3E-19 4.3E-24 149.5 14.7 110 3-128 30-139 (149)
15 2d8k_A Synaptotagmin VII; exoc 99.8 7E-20 2.4E-24 149.5 13.0 111 3-129 25-136 (141)
16 3fdw_A Synaptotagmin-like prot 99.8 1.1E-19 3.7E-24 149.8 14.0 114 3-130 22-136 (148)
17 3rdl_A Protein kinase C alpha 99.8 1.6E-19 5.4E-24 145.7 14.4 111 3-129 15-125 (137)
18 1ugk_A Synaptotagmin IV, KIAA1 99.8 1.2E-19 4E-24 147.7 13.4 111 3-128 21-133 (138)
19 1rsy_A Synaptotagmin I; calciu 99.8 1.5E-19 5.1E-24 149.8 13.6 110 3-128 41-150 (152)
20 2chd_A Rabphilin-3A, exophilin 99.8 1.4E-19 4.7E-24 147.7 12.8 111 3-127 28-139 (142)
21 1v27_A Regulating synaptic mem 99.8 5.4E-20 1.9E-24 149.1 10.3 118 3-135 20-141 (141)
22 3fbk_A RGS3, RGP3, regulator o 99.8 1.1E-19 3.7E-24 151.1 12.3 121 3-138 26-147 (153)
23 3f04_A Synaptotagmin-1; C2A, c 99.8 1.2E-19 4.1E-24 148.2 12.2 109 3-127 33-141 (143)
24 2bwq_A Regulating synaptic mem 99.8 2.1E-19 7.3E-24 143.8 13.4 109 3-126 17-128 (129)
25 2cjs_A UNC-13 homolog A, MUNC1 99.8 3E-19 1E-23 152.7 15.0 118 3-144 13-140 (167)
26 3n5a_A Synaptotagmin-7; calciu 99.8 2.2E-19 7.5E-24 144.8 13.2 101 3-114 15-115 (138)
27 2z0u_A WW domain-containing pr 99.8 7E-20 2.4E-24 154.3 10.6 113 3-127 42-154 (155)
28 3l9b_A Otoferlin; C2-domain, b 99.8 3.9E-19 1.3E-23 150.0 14.7 118 5-145 22-140 (144)
29 2r83_A Synaptotagmin-1; C2A-C2 99.8 6E-19 2E-23 158.8 16.9 127 3-145 18-147 (284)
30 2dmg_A KIAA1228 protein; beta- 99.8 6.5E-20 2.2E-24 149.6 9.2 118 3-135 23-142 (142)
31 2cm5_A Rabphilin-3A; protein t 99.8 8.5E-19 2.9E-23 147.2 14.4 100 3-113 36-135 (166)
32 1tjx_A Similar to synaptotagmi 99.8 9.7E-19 3.3E-23 145.7 14.5 114 3-128 24-147 (159)
33 2enp_A B/K protein; C2 type 1, 99.8 2.4E-19 8.2E-24 147.3 9.7 109 3-127 25-140 (147)
34 1w15_A Synaptotagmin IV; metal 99.8 1.1E-18 3.6E-23 144.3 13.6 97 3-110 29-125 (153)
35 1rh8_A Piccolo protein; beta-s 99.8 1E-19 3.5E-24 148.2 6.9 121 3-129 17-139 (142)
36 2q3x_A Regulating synaptic mem 99.8 8.8E-19 3E-23 148.6 12.5 110 3-129 29-140 (171)
37 1djx_A PLC-D1, phosphoinositid 99.8 6.2E-18 2.1E-22 171.0 18.3 124 3-144 496-623 (624)
38 1wfm_A Synaptotagmin XIII; C2 99.8 2.7E-18 9.3E-23 140.5 12.8 109 3-129 25-133 (138)
39 1dqv_A Synaptotagmin III; beta 99.8 6.2E-18 2.1E-22 154.4 13.8 128 3-145 19-149 (296)
40 3jzy_A Intersectin 2; C2 domai 99.7 2.5E-17 8.7E-22 159.5 13.6 121 3-144 386-507 (510)
41 2r83_A Synaptotagmin-1; C2A-C2 99.7 3.8E-16 1.3E-20 140.4 13.9 115 3-128 149-272 (284)
42 3nsj_A Perforin-1; pore formin 99.7 4.2E-16 1.4E-20 155.4 14.8 112 3-145 393-504 (540)
43 3ohm_B 1-phosphatidylinositol- 99.6 5.2E-15 1.8E-19 154.8 15.3 117 4-145 725-845 (885)
44 1dqv_A Synaptotagmin III; beta 99.6 3.6E-16 1.2E-20 142.7 5.3 100 3-113 151-250 (296)
45 2zkm_X 1-phosphatidylinositol- 99.6 8.7E-15 3E-19 151.8 16.1 116 3-143 677-797 (799)
46 3qr0_A Phospholipase C-beta (P 99.6 1.3E-14 4.3E-19 150.9 15.8 118 4-145 650-771 (816)
47 3bxj_A RAS GTPase-activating p 99.6 2.2E-16 7.7E-21 154.8 -0.6 119 3-146 10-158 (483)
48 1cjy_A CPLA2, protein (cytosol 99.5 5.8E-15 2E-19 152.1 8.9 106 3-127 17-125 (749)
49 3pfq_A PKC-B, PKC-beta, protei 99.5 1E-13 3.4E-18 140.2 12.7 111 3-129 171-281 (674)
50 1yrk_A NPKC-delta, protein kin 98.9 3.3E-08 1.1E-12 81.5 15.0 116 4-144 6-124 (126)
51 2enj_A NPKC-theta, protein kin 98.8 4.8E-08 1.6E-12 81.6 11.7 116 4-144 10-129 (138)
52 3hhm_A Phosphatidylinositol-4, 95.7 0.057 1.9E-06 57.9 11.6 95 4-109 355-453 (1091)
53 2wxf_A Phosphatidylinositol-4, 95.3 0.082 2.8E-06 56.0 10.8 77 4-92 217-293 (940)
54 2yrb_A Protein fantom; beta sa 95.2 0.094 3.2E-06 44.4 8.9 125 4-145 18-150 (156)
55 3l4c_A Dedicator of cytokinesi 94.1 0.8 2.7E-05 40.7 12.6 58 49-109 77-138 (220)
56 2y3a_A Phosphatidylinositol-4, 92.6 0.14 4.8E-06 55.0 6.2 77 4-92 353-429 (1092)
57 1e7u_A Phosphatidylinositol 3- 92.4 0.46 1.6E-05 50.4 9.7 78 4-92 218-295 (961)
58 2qzq_A Axin interactor, dorsal 85.4 2.6 8.8E-05 35.5 7.3 100 5-115 15-117 (152)
59 2z73_A Rhodopsin; visual pigme 24.3 16 0.00055 33.2 0.0 54 172-228 392-445 (448)
No 1
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.92 E-value=2.7e-24 Score=174.27 Aligned_cols=122 Identities=20% Similarity=0.313 Sum_probs=107.2
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|++|+..+.+++.||||+|++.+ ++.||+++++++.||+|||+|.|.+.+. .
T Consensus 9 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-------------~~~kT~~~~~~~~nP~Wne~f~f~v~~~-----~ 70 (136)
T 1wfj_A 9 HGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT-------------QDQKSNVAEGMGTTPEWNETFIFTVSEG-----T 70 (136)
T ss_dssp EEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS-------------CEEECCCCTTCCSSCEEEEEEEEEEESS-----C
T ss_pred cEEEEEEEEeccCCCCcccCCCcCceEEEEECC-------------ccceeEeccCCCCCCccCcEEEEEECCC-----C
Confidence 578999999999999999899999999999976 4679999876799999999999999852 2
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcCCCCcceEEEEEEEEee
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGHGKPNGVLSFCYKLKG 145 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~GK~~G~L~Lsl~f~p 145 (281)
..|+|+|||++.+++|++||++.|+|.+|.... .....||+|. .+++..|+|+|+++|.|
T Consensus 71 ~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~--~~~~~w~~L~-~~~~~~G~i~l~l~~~p 130 (136)
T 1wfj_A 71 TELKAKIFDKDVGTEDDAVGEATIPLEPVFVEG--SIPPTAYNVV-KDEEYKGEIWVALSFKP 130 (136)
T ss_dssp CEEEEEECCSSSCTTTCCSEEEEEESHHHHHHS--EEEEEEEEEE-ETTEEEEEEEEEEEEEE
T ss_pred CEEEEEEEECCCCCCCceEEEEEEEHHHhccCC--CCCcEEEEee-cCCccCEEEEEEEEEEe
Confidence 489999999998888999999999999996532 3457789988 57789999999999998
No 2
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.91 E-value=5e-23 Score=167.51 Aligned_cols=124 Identities=19% Similarity=0.288 Sum_probs=103.6
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|+||+..+. ++.||||+|++.+ +++||++++ ++.||+|||+|.|.+...... ..
T Consensus 6 ~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~-------------~~~kT~v~~-~t~nP~wne~f~f~v~~~~~~-~~ 69 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKTKF-GKPDPIVSVIFKD-------------EKKKTKKVD-NELNPVWNEILEFDLRGIPLD-FS 69 (140)
T ss_dssp CCEEEEEEEEEESCCCCSS-SCCCEEEEEECSS-------------CEEECCCCC-SCSSCEEEEEEEEECSSCCCC-TT
T ss_pred CcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECC-------------EeEEeeeec-CCCCCccCcEEEEEecccccC-CC
Confidence 4799999999999999988 9999999999975 578999976 589999999999999753221 12
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEE---EEcCCC-CcceEEEEEEEEee
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQ---IRTGHG-KPNGVLSFCYKLKG 145 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~---L~~~~G-K~~G~L~Lsl~f~p 145 (281)
..|+|+|||++.+++|++||++.|+|.+|..+.. ...||. |.+.++ +.+|.|+|+++|.+
T Consensus 70 ~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~---~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 70 SSLGIIVKDFETIGQNKLIGTATVALKDLTGDQS---RSLPYKLISLLNEKGQDTGATIDLVIGYDP 133 (140)
T ss_dssp CEEEEEEEETTCSSSCCCCEEEEEEGGGTCSSSC---EEEEEEEEEEECTTCCEEEEEEEEEEEECC
T ss_pred CEEEEEEEECCCCCCCceEEEEEEEHHHhccCCC---ceeEEeeeeccCCCCCCCCCEEEEEEEEEC
Confidence 5899999999988889999999999999977542 234554 777655 47799999999998
No 3
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.88 E-value=1e-22 Score=164.88 Aligned_cols=118 Identities=25% Similarity=0.324 Sum_probs=101.6
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|+||+..+.++++||||+|++.+ +++||+++++ +.||+|||+|.|.+.+..
T Consensus 12 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-------------~~~kT~~~~~-t~nP~wne~f~f~~~~~~----- 72 (133)
T 2ep6_A 12 VGILQVKVLKAADLLAADFSGKSDPFCLLELGN-------------DRLQTHTVYK-NLNPEWNKVFTFPIKDIH----- 72 (133)
T ss_dssp SEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT-------------EEEECCCCSS-CSSCCCCEEEEEEESCTT-----
T ss_pred ceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC-------------EEEEeeeecC-CCCCccccEEEEEecCCC-----
Confidence 589999999999999999899999999999965 4789999875 899999999999997531
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcCC--CCcceEEEEEEEEe
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGH--GKPNGVLSFCYKLK 144 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~--GK~~G~L~Lsl~f~ 144 (281)
..|+|+|+|++.+++|++||++.|+|.++..+. ..||+|...+ ++.+|+|+|+++|.
T Consensus 73 ~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 73 DVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ-----PNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp CEEEEEEEEEETTEEEEECCBCEEEGGGCCSSC-----CEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred CEEEEEEEECCCCCCCCeeEEEEEEHHHccCCC-----ceEEEeecCCCCCccceEEEEEEEEE
Confidence 389999999998878999999999999997643 2578887654 45889999999885
No 4
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.88 E-value=3.5e-22 Score=169.72 Aligned_cols=130 Identities=20% Similarity=0.260 Sum_probs=99.3
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|++|+..+.++++||||+|++.+...+ ..+++||++++ ++.||+|||+|.|.+....
T Consensus 7 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~-------~~~~~kT~v~~-~t~nP~Wne~f~f~v~~~~----- 73 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSG-------ILTSVQTKTIK-KSLNPKWNEEILFRVLPQR----- 73 (176)
T ss_dssp CEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTE-------EEEEEECCCCS-SCSSCEEEEEEEEEECTTT-----
T ss_pred cEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCC-------cccceeCceEC-CCCCCcccceEEEEEcCCC-----
Confidence 5899999999999999998999999999999863211 11478999987 5999999999999997421
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCC---ceEEEEEEEEcC--CCCcceEEEEEEEEee
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNG---AVRFVRYQIRTG--HGKPNGVLSFCYKLKG 145 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g---~~~~vsy~L~~~--~GK~~G~L~Lsl~f~p 145 (281)
..|.|+|||.+.+++|++||++.|+|.+|..+... .....||.|... .++.+|.|+|+++|.|
T Consensus 74 ~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p 141 (176)
T 3m7f_B 74 HRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 141 (176)
T ss_dssp CEEEEEEEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEe
Confidence 48999999999888899999999999999876421 011267887753 4567899999999998
No 5
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.88 E-value=4e-22 Score=164.73 Aligned_cols=130 Identities=18% Similarity=0.276 Sum_probs=99.2
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|++|+..+.+++.||||+|++.+.... ...++||+++++ +.||+|||+|.|.+... .
T Consensus 19 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~-------~~~~~kT~v~~~-t~nP~wne~f~f~v~~~-----~ 85 (153)
T 3b7y_A 19 SRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNG-------VLTSVQTKTIKK-SLNPKWNEEILFRVHPQ-----Q 85 (153)
T ss_dssp CEEEEEEEEEEESCC-------CCEEEEEEEEETTTE-------EEEEEECCCCSS-CSSCCCCEEEEEEECTT-----T
T ss_pred ccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCc-------cceeeeCccccC-CCCCCCCCEEEEEecCC-----C
Confidence 3689999999999999988899999999999853210 015789999875 89999999999999752 1
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCC---ceEEEEEEEEcC--CCCcceEEEEEEEEee
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNG---AVRFVRYQIRTG--HGKPNGVLSFCYKLKG 145 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g---~~~~vsy~L~~~--~GK~~G~L~Lsl~f~p 145 (281)
..|+|+|||++.+++|++||++.|+|.+|..+... .....||+|... .++..|+|+|+++|.|
T Consensus 86 ~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 86 HRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 48999999999888899999999999999876531 122468888654 3467899999999975
No 6
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.88 E-value=3.5e-22 Score=162.80 Aligned_cols=118 Identities=16% Similarity=0.222 Sum_probs=97.3
Q ss_pred ceEEEEEEEeecCCCCCCCCCC-----------CCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEE
Q 040877 3 WSTLELKVNSCSDLKAFNLFNR-----------LSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKF 71 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk-----------~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F 71 (281)
.+.|+|+|++|+||+..+.+++ .||||+|.+.+. ...||++.+ ++.||+|||+|.|
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~------------~~~~T~~~~-~t~nP~WnE~f~f 71 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDS------------RIGQTATKQ-KTNSPAWHDEFVT 71 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTE------------EEEECCCCS-SCSSCEEEEEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCe------------EeeeeeEEC-CCcCCccCCEEEE
Confidence 5899999999999998876554 899999999542 356888865 5899999999999
Q ss_pred EeccCccCCCceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcCCCCcceEEEEEEEEee
Q 040877 72 DIKAFVDNCNHLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGHGKPNGVLSFCYKLKG 145 (281)
Q Consensus 72 ~V~~~~~~~~~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~GK~~G~L~Lsl~f~p 145 (281)
.+.+. ..|.|+|||++.+++|++||++.|+|.++..+.. .....|+.| +++|.|+|.++|.+
T Consensus 72 ~v~~~------~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~-~~~~~w~~L-----~~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 72 DVCNG------RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGS-RHFEDWIDL-----EPEGKVYVIIDLSG 133 (136)
T ss_dssp EEEEE------CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTC-SEEEEEEEC-----BSSCEEEEEEEEEE
T ss_pred EecCC------CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCC-CCccEEEEc-----CCCeEEEEEEEEEe
Confidence 99743 3899999999988889999999999999987532 233567765 35899999999976
No 7
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.87 E-value=1.2e-21 Score=168.13 Aligned_cols=124 Identities=18% Similarity=0.217 Sum_probs=101.6
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.++|+|+|++|++|++.+.+++.||||+|++.+ +++||++++ ++.||+|||+|.|.+.. .
T Consensus 35 ~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~-------------~~~kT~v~~-~tlnP~Wne~f~f~v~~------~ 94 (173)
T 2nq3_A 35 KSQLQITVISAKLKENKKNWFGPSPYVEVTVDG-------------QSKKTEKCN-NTNSPKWKQPLTVIVTP------V 94 (173)
T ss_dssp CEEEEEEEEEEEECCCC--CCCCCEEEEEEETT-------------EEEECCCCS-SCSSCEEEEEEEEEECT------T
T ss_pred ceEEEEEEEEeECCCCcccCCCCCeEEEEEECC-------------EEeEccccC-CCCCCeECCEEEEEeCC------C
Confidence 478999999999999554456699999999965 478999987 68999999999999853 1
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceE--EEEEEEEcCC--CCcceEEEEEEEEeee
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVR--FVRYQIRTGH--GKPNGVLSFCYKLKGM 146 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~--~vsy~L~~~~--GK~~G~L~Lsl~f~p~ 146 (281)
..|.|+|||++.+++|++||++.|+|.+|..+..+... ..|++|...+ .+..|+|+|++.+.++
T Consensus 95 ~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 95 SKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred CEEEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 38999999999888899999999999999987644322 5688887653 4578999999988864
No 8
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.87 E-value=2.1e-21 Score=159.60 Aligned_cols=118 Identities=16% Similarity=0.210 Sum_probs=99.3
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|++|+..+.+++.||||+|.+.+ ++.||++++ ++.||+|||+|.|.+....
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~-------------~~~kT~~~~-~t~nP~Wne~f~f~v~~~~----- 76 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQVGK-------------TKKRTKTIY-GNLNPVWEENFHFECHNSS----- 76 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT-------------EEEECCCCC-SCSSCEEEEEEEEEECSTT-----
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECC-------------EEEECCccC-CCCCCCcccEEEEEecCCC-----
Confidence 589999999999999999899999999999943 578999987 5899999999999997532
Q ss_pred eEEEEEEEECCcc-----------CCCeeeEEEEEechhhhcccCCceEEEEEEEEcCC--CCcceEEEEEEEEe
Q 040877 83 LFIAFDLYSEGVI-----------YGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGH--GKPNGVLSFCYKLK 144 (281)
Q Consensus 83 ~~L~~eV~d~~~~-----------~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~--GK~~G~L~Lsl~f~ 144 (281)
..|.|+|||.+.+ ++|++||++.|+|.++.. ....||.|...+ ++.+|.|+|+++|.
T Consensus 77 ~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~-----~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 77 DRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLSG-----EMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp CEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCCS-----EEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred CEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHCcC-----CCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 3799999999975 689999999999999832 235678887443 44779999999885
No 9
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.87 E-value=1.4e-21 Score=158.03 Aligned_cols=123 Identities=14% Similarity=0.209 Sum_probs=98.5
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCC
Q 040877 1 MEWSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNC 80 (281)
Q Consensus 1 Me~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~ 80 (281)
++..+|+|+|++|++|+..+.+++.||||+|++.+.. +++||++++ ++.||+|||+|.|.+...
T Consensus 2 ~~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~-----------~~~kT~v~~-~t~nP~wne~f~f~v~~~---- 65 (132)
T 3pyc_A 2 SEFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSG-----------QCHSTDTVK-NTLDPKWNQHYDLYVGKT---- 65 (132)
T ss_dssp CSEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTC-----------CEEECCCCS-SCSSCEEEEEEEEEEETT----
T ss_pred CCeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCC-----------ceEECCccC-CCCCCCccCEEEEEeCCC----
Confidence 3668999999999999999999999999999996531 588999985 699999999999999742
Q ss_pred CceEEEEEEEECCccCC---CeeeEEEEEechhhhcccCCceEEEEEEEEcCC----CCcceEEEEEEEE
Q 040877 81 NHLFIAFDLYSEGVIYG---YRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGH----GKPNGVLSFCYKL 143 (281)
Q Consensus 81 ~~~~L~~eV~d~~~~~g---Dk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~----GK~~G~L~Lsl~f 143 (281)
. .|.|+|||++.+++ |++||++.|+|.+|....... ..+++|...+ .+.+|+|+|++..
T Consensus 66 ~--~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~--~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 66 D--SITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTG--YQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp C--CEEEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSC--CEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred C--EEEEEEEECCCCCCCCCCCceEEEEEeHHHhhcccccC--cEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 1 49999999998765 799999999999985543222 2446665442 2358999998864
No 10
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.87 E-value=7e-22 Score=168.23 Aligned_cols=118 Identities=13% Similarity=0.153 Sum_probs=97.1
Q ss_pred ceEEEEEEEeecCCCCCCCC----------CCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEE
Q 040877 3 WSTLELKVNSCSDLKAFNLF----------NRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFD 72 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~----------gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~ 72 (281)
.+.|+|+|++|+||+..+.. +.+||||+|.+++. +..||++.+ ++.||+|||+|.|.
T Consensus 28 ~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~------------~~~kT~v~~-ktlnP~WNE~F~f~ 94 (157)
T 2fk9_A 28 NGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQV------------RVGQTSTKQ-KTNKPTYNEEFCAN 94 (157)
T ss_dssp EEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTE------------EEEECCCCS-SCSSCEEEEEEEEE
T ss_pred ccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCE------------eeEEeeecC-CCCCCccCcEEEEE
Confidence 48999999999999987632 56899999999652 357899865 59999999999999
Q ss_pred eccCccCCCceEEEEEEEECCccCCCeeeEEEEEechhhhccc-CCceEEEEEEEEcCCCCcceEEEEEEEEe
Q 040877 73 IKAFVDNCNHLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEF-NGAVRFVRYQIRTGHGKPNGVLSFCYKLK 144 (281)
Q Consensus 73 V~~~~~~~~~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~-~g~~~~vsy~L~~~~GK~~G~L~Lsl~f~ 144 (281)
+.+. ..|.|+|+|++.++.|++||++.|+|.+|..+. .+.....||+|. ++|.|+|.++|.
T Consensus 95 v~~~------~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~-----~~G~i~l~l~~~ 156 (157)
T 2fk9_A 95 VTDG------GHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE-----PEGKVFVVITLT 156 (157)
T ss_dssp EEEE------CEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB-----SSCEEEEEEEEC
T ss_pred cCCC------CEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC-----CCcEEEEEEEEE
Confidence 9642 379999999998888999999999999999762 123457888883 389999999885
No 11
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.86 E-value=1.3e-21 Score=160.47 Aligned_cols=120 Identities=18% Similarity=0.263 Sum_probs=88.5
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCC
Q 040877 1 MEWSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNC 80 (281)
Q Consensus 1 Me~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~ 80 (281)
|..+.|.|+|++|++|.. .+++||||+|+ + ++.||+++++++.||+|||+|.|.+....
T Consensus 2 ~~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~-------------~~~kt~~~~~~t~nP~WnE~f~f~v~~~~--- 60 (131)
T 2cjt_A 2 GVMSLLCVGVKKAKFDGA---QEKFNTYVTLK--V-------------QNVKSTTIAVRGSQPSWEQDFMFEINRLD--- 60 (131)
T ss_dssp CCCEEEEEEEEEEECSSC---GGGCEEEEEEE--E-------------TTEEEECCCEESSSCEEEEEEEEEECCCS---
T ss_pred CcceEEEEEEEEeECCCC---CCCcCeEEEEE--e-------------cCEEEeEecCCCCCceECCEEEEEEeCCC---
Confidence 888999999999999863 57899999999 2 24466666667899999999999998532
Q ss_pred CceEEEEEEEECCccCCCeeeEEEEEechhhhccc-CC--ceEEEEEEEEcCCCCcceE-------EEEEEEEe
Q 040877 81 NHLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEF-NG--AVRFVRYQIRTGHGKPNGV-------LSFCYKLK 144 (281)
Q Consensus 81 ~~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~-~g--~~~~vsy~L~~~~GK~~G~-------L~Lsl~f~ 144 (281)
..|.|+|+|++ +++|++||++.|+|.++.... .+ ....++|.+...+|+..|+ +.+.++|.
T Consensus 61 --~~L~~~V~D~d-~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~~ 131 (131)
T 2cjt_A 61 --LGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 131 (131)
T ss_dssp --SEEEEEEEECC-SSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEEC
T ss_pred --CeEEEEEEECC-CCCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEeC
Confidence 37999999999 889999999999999987643 22 2345567777678887776 88888873
No 12
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.86 E-value=3.1e-21 Score=153.95 Aligned_cols=119 Identities=13% Similarity=0.168 Sum_probs=96.5
Q ss_pred ceEEEEEEEeecCCCCC---CCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccC
Q 040877 3 WSTLELKVNSCSDLKAF---NLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDN 79 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~---~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~ 79 (281)
.+.|+|+|++|+||+.. +.+++.||||+|++.+... +++||++++ ++.||+|||+|.|.+....
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~----------~~~kT~v~~-~t~nP~wne~f~f~v~~~~-- 68 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPD----------SRKRTRHFN-NDINPVWNETFEFILDPNQ-- 68 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTT----------CCEECCCCT-TCSSCEEEEEEEEEECTTS--
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCC----------ceEEccccC-CCCCCcccceEEEEecCCC--
Confidence 57899999999999984 5678999999999976421 588999987 5899999999999996432
Q ss_pred CCceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcCCCCcceEEEEEEEE
Q 040877 80 CNHLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGHGKPNGVLSFCYKL 143 (281)
Q Consensus 80 ~~~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~GK~~G~L~Lsl~f 143 (281)
...|.|+|||++.+ +|++||++.|+|.+|..+. ....||+|.. +..|.|+|+++.
T Consensus 69 --~~~l~i~V~d~d~~-~~~~iG~~~i~l~~l~~~~---~~~~~~~L~~---~~~g~i~~~le~ 123 (126)
T 1rlw_A 69 --ENVLEITLMDANYV-MDETLGTATFTVSSMKVGE---KKEVPFIFNQ---VTEMVLEMSLEV 123 (126)
T ss_dssp --CCEEEEEEEECCSS-CCEEEEEEEEEGGGSCTTC---EEEEEEEETT---TEEEEEEEEEEC
T ss_pred --CCEEEEEEEECCCC-CCceeEEEEEEHHHccCCC---cEEEEEEcCC---CceEEEEEEEEe
Confidence 24899999999976 6999999999999997653 4567888743 566777777654
No 13
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.83 E-value=6.4e-20 Score=149.74 Aligned_cols=111 Identities=20% Similarity=0.185 Sum_probs=90.4
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEE-eccCccCCC
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFD-IKAFVDNCN 81 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~-V~~~~~~~~ 81 (281)
.+.|+|+|++|+||+. +..++.||||+|++.++..+ ..++||++++ ++.||+|||+|.|. +.......
T Consensus 19 ~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~--------~~~~kT~v~~-~t~nP~wnE~f~f~~v~~~~l~~- 87 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHK--------TSKRKTKISR-KTRNPTFNEMLVYSGYSKETLRQ- 87 (134)
T ss_dssp TTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSS--------CCCEECCCCC-SCSSCEEEEEEEEESCCHHHHTT-
T ss_pred CCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCC--------CceecCCcCc-CCCCCCCccEEEECCcCHHHhCc-
Confidence 4689999999999997 66789999999999754221 1688999987 59999999999999 76432222
Q ss_pred ceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEc
Q 040877 82 HLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRT 128 (281)
Q Consensus 82 ~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~ 128 (281)
..|.|+|||++.+++|++||++.|+|.++..+. ....||+|..
T Consensus 88 -~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~---~~~~W~~L~~ 130 (134)
T 2b3r_A 88 -RELQLSVLSAESLRENFFLGGITLPLKDFNLSK---ETVKWYQLTA 130 (134)
T ss_dssp -CEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTS---CEEEEEECBC
T ss_pred -CEEEEEEEECCCCCCCcEEEEEEEEhhhccCCC---CcceeEECCC
Confidence 489999999998888999999999999997653 3467888864
No 14
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.82 E-value=1.3e-19 Score=149.54 Aligned_cols=110 Identities=16% Similarity=0.225 Sum_probs=92.3
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|+||+..+.+++.||||+|++.++..+. .++||+++++ +.||+|||+|.|.+..... .
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~--------~~~kT~v~~~-t~nP~wne~f~f~v~~~~~---~ 97 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSE--------SKQKTKTIKC-SLNPEWNETFRFQLKESDK---D 97 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCS--------SCEECCCCSS-CSSCEEEEEEEEECCSGGG---G
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCc--------ceEecceeCC-CCCCcCCcEEEEEeccccC---C
Confidence 36799999999999999989999999999998643211 6889999875 9999999999999975322 1
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEc
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRT 128 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~ 128 (281)
..|.|+|||++.+++|++||++.|+|.+|..+. ...||.|..
T Consensus 98 ~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~----~~~W~~L~~ 139 (149)
T 1a25_A 98 RRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG----VDGWFKLLS 139 (149)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEHHHHTTCC----EEEEEECBC
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEEHHHhCcCc----cCCeEEccC
Confidence 379999999998888999999999999998752 456888865
No 15
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=7e-20 Score=149.52 Aligned_cols=111 Identities=16% Similarity=0.220 Sum_probs=91.6
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEecc-CccCCC
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKA-FVDNCN 81 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~-~~~~~~ 81 (281)
.+.|+|+|++|+||+..+..++.||||+|++.++.. +++||++++ ++.||+|||+|.|.+.. ....
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~----------~~~kT~v~~-~t~nP~wne~f~f~~~~~~~~~-- 91 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKK----------HKLETKVKR-KNLNPHWNETFLFEGFPYEKVV-- 91 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCS----------SEEECCCCT-TCSSCCCCEEEEECSCCHHHHT--
T ss_pred CCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCC----------ccEeCceEc-CCCCCccccEEEECccCHHHcc--
Confidence 478999999999999999889999999999975421 588999976 69999999999999632 1111
Q ss_pred ceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcC
Q 040877 82 HLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTG 129 (281)
Q Consensus 82 ~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~ 129 (281)
...|+|+|+|++.+++|++||++.|+|.+|..+. ....||.|...
T Consensus 92 ~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~---~~~~W~~L~~~ 136 (141)
T 2d8k_A 92 QRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQ---MQTFWKDLKPS 136 (141)
T ss_dssp TSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTS---CEEEEECCEEC
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCC---CccEEEECcCC
Confidence 2489999999998888999999999999998753 35678888753
No 16
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.82 E-value=1.1e-19 Score=149.80 Aligned_cols=114 Identities=13% Similarity=0.202 Sum_probs=93.0
Q ss_pred ceEEEEEEEeecCCCCCC-CCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCC
Q 040877 3 WSTLELKVNSCSDLKAFN-LFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCN 81 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~-~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~ 81 (281)
.+.|+|+|++|+||+..+ ..++.||||+|.+.++... ..++||++++ ++.||+|||+|.|.+......
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~--------~~~~kT~v~~-~t~nP~wne~f~f~v~~~~~~-- 90 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSR--------QGKRKTSIKR-DTVNPLYDETLRYEIPESLLA-- 90 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSG--------GGEEECCCCS-SCSSCEEEEEEEEECCSTTGG--
T ss_pred CCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcc--------cCccccccCC-CCCCCcEeeEEEEEeChhHhC--
Confidence 468999999999999887 5789999999999865321 1588999976 589999999999999754322
Q ss_pred ceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcCC
Q 040877 82 HLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGH 130 (281)
Q Consensus 82 ~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~ 130 (281)
...|.|+|||.+.+++|++||++.|+|.++..+. ....||+|....
T Consensus 91 ~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~---~~~~W~~L~~~~ 136 (148)
T 3fdw_A 91 QRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDK---KLDHCLPLHGKI 136 (148)
T ss_dssp GCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHC---CSEEEEECBCC-
T ss_pred ceEEEEEEEECCCCcCCcEEEEEEEEcccccccC---CccceEECcCcc
Confidence 2479999999998888999999999999998754 235788887643
No 17
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.82 E-value=1.6e-19 Score=145.74 Aligned_cols=111 Identities=17% Similarity=0.220 Sum_probs=92.6
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|++|+..+.+++.||||+|++.++... ..++||++++ ++.||+|||+|.|.+..... .
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~--------~~~~kT~~~~-~t~nP~wne~f~f~~~~~~~---~ 82 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKN--------ESKQKTKTIR-STLNPQWNESFTFKLKPSDK---D 82 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTC--------CCCEECCCCC-SCSSCEEEEEEEEECCGGGG---G
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCC--------CeeecCceEc-CCCCCCcccEEEEEcCchhc---C
Confidence 4789999999999999998999999999999754321 1688999987 47999999999999975332 1
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcC
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTG 129 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~ 129 (281)
..|.|+|||.+.+++|++||++.|+|.+|..+. ...||+|...
T Consensus 83 ~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~----~~~W~~L~~~ 125 (137)
T 3rdl_A 83 RRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP----ASGWYKLLNQ 125 (137)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC----EEEEEECBCH
T ss_pred CEEEEEEEECCCCCCCceEEEEEEeHHHhccCc----cCceEECcCc
Confidence 379999999998888999999999999998753 4678888753
No 18
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.82 E-value=1.2e-19 Score=147.67 Aligned_cols=111 Identities=17% Similarity=0.186 Sum_probs=89.9
Q ss_pred ceEEEEEEEeecCCCCCCCC-CCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEE-eccCccCC
Q 040877 3 WSTLELKVNSCSDLKAFNLF-NRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFD-IKAFVDNC 80 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~-gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~-V~~~~~~~ 80 (281)
.+.|+|+|++|+||+..+.+ ++.||||+|++.++.. +++||++++ ++.||+|||+|.|. +......
T Consensus 21 ~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~----------~~~kT~v~~-~t~nP~wne~f~f~~v~~~~~~- 88 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKK----------HKVKTRVLR-KTLDPAFDETFTFYGIPYTQIQ- 88 (138)
T ss_dssp GTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTC----------SEEECCCCS-SCSSCEEEEEEEEECCCSTTGG-
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCC----------ceEecCcCc-CCCCCcEeeEEEEcCcCHHHhc-
Confidence 46899999999999999886 8999999999986421 588999987 69999999999996 6543222
Q ss_pred CceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEc
Q 040877 81 NHLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRT 128 (281)
Q Consensus 81 ~~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~ 128 (281)
...|.|+|||++.+++|++||++.|+|.+|..+.. ....|+.|..
T Consensus 89 -~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~--~~~~~~~l~~ 133 (138)
T 1ugk_A 89 -ELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEG--KMLMNREIIS 133 (138)
T ss_dssp -GCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTC--CEEEEEECBS
T ss_pred -cCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCC--cchhhhhhhc
Confidence 24899999999988889999999999999987542 2345666654
No 19
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.82 E-value=1.5e-19 Score=149.82 Aligned_cols=110 Identities=15% Similarity=0.177 Sum_probs=91.2
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|+||+..+.+++.||||+|++.++.. +++||+++++ +.||+|||+|.|.+...... .
T Consensus 41 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~----------~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~--~ 107 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK----------KKFETKVHRK-TLNPVFNEQFTFKVPYSELG--G 107 (152)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCC----------SCEECCCCTT-CSSCEEEEEEEECCCHHHHT--T
T ss_pred CCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCC----------ceEeccccCC-CCCCcCcccEEEeecHHHcC--C
Confidence 468999999999999999889999999999975421 5789999874 89999999999998743221 2
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEc
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRT 128 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~ 128 (281)
..|.|+|||++.+++|++||++.|+|.++..+. ....||+|..
T Consensus 108 ~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~---~~~~W~~L~~ 150 (152)
T 1rsy_A 108 KTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH---VTEEWRDLQS 150 (152)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSS---CEEEEEECBC
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEchhccCCC---CcceEEECCC
Confidence 489999999998888999999999999997653 3467888754
No 20
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.81 E-value=1.4e-19 Score=147.69 Aligned_cols=111 Identities=19% Similarity=0.240 Sum_probs=89.8
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEE-eccCccCCC
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFD-IKAFVDNCN 81 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~-V~~~~~~~~ 81 (281)
.+.|+|+|++|++|+..+..++.||||+|++.++..+. .++||++++ ++.||+|||+|.|. +......
T Consensus 28 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~--------~~~kT~v~~-~t~nP~wne~f~f~~~~~~~~~-- 96 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKS--------NKLRTKTLR-NTRNPVWNETLQYHGITEEDMQ-- 96 (142)
T ss_dssp GTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGG--------GEEECCCCC-SCSSCEEEEEEEEESCCHHHHH--
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCc--------ceeeCCcCC-CCCCCcCcCEEEEcccCHHHcc--
Confidence 46899999999999999988999999999998643221 688999987 59999999999999 6532211
Q ss_pred ceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEE
Q 040877 82 HLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIR 127 (281)
Q Consensus 82 ~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~ 127 (281)
...|+|+|||++.+++|++||++.|+|.+|..+. ....++.|.
T Consensus 97 ~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~---~~~~~~~L~ 139 (142)
T 2chd_A 97 RKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQ---RKNFNICLE 139 (142)
T ss_dssp HCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTC---CEEEEEECB
T ss_pred CCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCC---ccEEEEecc
Confidence 1489999999998888999999999999998753 345555553
No 21
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.81 E-value=5.4e-20 Score=149.14 Aligned_cols=118 Identities=14% Similarity=0.212 Sum_probs=93.4
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEe-ccCccCCC
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDI-KAFVDNCN 81 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V-~~~~~~~~ 81 (281)
.+.|+|+|++|+||+..+..++.||||+|++.++... .+++||+++++ +.||+|||+|.|.+ ....+.
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~--------~~~~kT~~~~~-t~nP~wne~f~f~~~~~~~~~-- 88 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSD--------KNKRRTKTVKK-TLEPKWNQTFIYSPVHRREFR-- 88 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSS--------SSCCBCCCCSS-CSSCCCCCCCEECSCCTTGGG--
T ss_pred CCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCC--------CcceeCccccC-CCCCccccEEEEccCCHHHhc--
Confidence 4689999999999999998899999999999654211 16889999875 99999999999995 322222
Q ss_pred ceEEEEEEEECCccCC--CeeeEEEEEechhhhcccCCceEEEEEEEEcC-CCCcce
Q 040877 82 HLFIAFDLYSEGVIYG--YRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTG-HGKPNG 135 (281)
Q Consensus 82 ~~~L~~eV~d~~~~~g--Dk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~-~GK~~G 135 (281)
...|.|+|||++.++. |++||++.|+|.++.... ...||.|... +|+..|
T Consensus 89 ~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~----~~~W~~L~~~~~g~~sg 141 (141)
T 1v27_A 89 ERMLEITLWDQARVREEESEFLGEILIELETALLDD----EPHWYKLQTHDSGPSSG 141 (141)
T ss_dssp TCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS----EEEEEECBCCSSCCCCC
T ss_pred CCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC----CCceEECcccccCCCCC
Confidence 2489999999998776 999999999999987532 4678998754 455444
No 22
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.81 E-value=1.1e-19 Score=151.06 Aligned_cols=121 Identities=17% Similarity=0.110 Sum_probs=94.4
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|.|+|++|+||+..+ .++.||||+|.+.++.... .++||++++ ++.||+|||+|.|.+......
T Consensus 26 ~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~--------~~~kT~v~~-~t~nP~wne~f~f~v~~~~~~--- 92 (153)
T 3fbk_A 26 DRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRL--------RHQKTQTVP-DCRDPAFHEHFFFPVQEEDDQ--- 92 (153)
T ss_dssp SSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCT--------TCEECCCCT-TCSSCEEEEEEEEECCGGGTT---
T ss_pred CCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCc--------cEEeccccC-CCCCCccccEEEEecccHHhC---
Confidence 578999999999999988 6899999999997653221 688999987 699999999999999643321
Q ss_pred eEEEEEEEECCccCC-CeeeEEEEEechhhhcccCCceEEEEEEEEcCCCCcceEEE
Q 040877 83 LFIAFDLYSEGVIYG-YRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGHGKPNGVLS 138 (281)
Q Consensus 83 ~~L~~eV~d~~~~~g-Dk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~GK~~G~L~ 138 (281)
..|.|+|||.+.+++ |++||++.|+|.+|.... .....||.|........+.|.
T Consensus 93 ~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~--~~~~~W~~L~~~~~g~~~~lk 147 (153)
T 3fbk_A 93 KRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPD--KEISGWYYLLGEHLGRTKHLK 147 (153)
T ss_dssp SEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC----CCEEEEEECBCTTGGGTCCCB
T ss_pred CEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCC--CccccEEECCChhhcccccce
Confidence 259999999998776 999999999999997521 234679999765433334333
No 23
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.81 E-value=1.2e-19 Score=148.21 Aligned_cols=109 Identities=16% Similarity=0.166 Sum_probs=90.5
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|++|+..+..++.||||+|.+.++.. +++||++++ ++.||+|||+|.|.+.......
T Consensus 33 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~----------~~~kT~v~~-~t~nP~wne~f~f~v~~~~l~~-- 99 (143)
T 3f04_A 33 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK----------KKFETKVHR-KTLNPVFNEQFTFKVPYSELGG-- 99 (143)
T ss_dssp TTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCS----------CCEECCCCC-SCSSCEEEEEEEECCCHHHHTT--
T ss_pred CCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCC----------ccEECccCc-CCCCCcCcCeEEEeecHhhcCC--
Confidence 468999999999999998889999999999975421 578999976 5899999999999987432222
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEE
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIR 127 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~ 127 (281)
..|+|+|||++.+++|++||++.|+|.++..+. ....||+|.
T Consensus 100 ~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~---~~~~W~~L~ 141 (143)
T 3f04_A 100 KTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH---VTEEWRDLQ 141 (143)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTS---CEEEEEECB
T ss_pred CEEEEEEEeCCCCCCCceEEEEEEEHHHccCCC---CcceEEECc
Confidence 489999999998888999999999999997653 345777764
No 24
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.81 E-value=2.1e-19 Score=143.81 Aligned_cols=109 Identities=13% Similarity=0.181 Sum_probs=84.4
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEecc-CccCCC
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKA-FVDNCN 81 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~-~~~~~~ 81 (281)
.+.|+|+|++|+||+..+.+++.||||+|++.++.... .++||++++ ++.||+|||+|.|.+.. ....
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~--------~~~kT~v~~-~t~nP~wne~f~f~~~~~~~~~-- 85 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDK--------NKRRTKTVK-KTLEPKWNQTFIYSPVHRREFR-- 85 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGG--------GEEECCCCS-SBSSCEEEEEEEECSCCGGGGG--
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCC--------cceeccccc-CCCCCccccEEEEccCCHHHhc--
Confidence 46899999999999999988999999999997643211 689999987 58999999999999632 2111
Q ss_pred ceEEEEEEEECCccCC--CeeeEEEEEechhhhcccCCceEEEEEEE
Q 040877 82 HLFIAFDLYSEGVIYG--YRSIGKVHVPLKDLIDEFNGAVRFVRYQI 126 (281)
Q Consensus 82 ~~~L~~eV~d~~~~~g--Dk~IG~v~VpL~dL~~g~~g~~~~vsy~L 126 (281)
...|.|+|+|++.+++ |++||++.|+|.++.... ...||+|
T Consensus 86 ~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~----~~~W~~L 128 (129)
T 2bwq_A 86 ERMLEITLWDQARVREEESEFLGEILIELETALLDD----EPHWYKL 128 (129)
T ss_dssp GCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS----CEEEEEC
T ss_pred CCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc----CCccEEC
Confidence 2489999999998776 999999999999987642 3567765
No 25
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.81 E-value=3e-19 Score=152.72 Aligned_cols=118 Identities=17% Similarity=0.268 Sum_probs=92.3
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|.|+|++|++|. ..+++||||+|+ + ++.||+++++++.||+|||+|.|.+....
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~-------------~~~kt~~~~~~t~nP~WnE~f~f~v~~~~----- 69 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK--V-------------QNVESTTIAVRGSQPSWEQDFMFEINRLD----- 69 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE--E-------------TTEEEECCCEESSSCEEEEEEEEECCCTT-----
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE--e-------------cceEEEEecCCCCCCCCCCEEEEEeeCCC-----
Confidence 358999999999885 268899999999 3 34567777667899999999999998532
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccC-C--ceEEEEEEEEcCCCCcceE-------EEEEEEEe
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFN-G--AVRFVRYQIRTGHGKPNGV-------LSFCYKLK 144 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~-g--~~~~vsy~L~~~~GK~~G~-------L~Lsl~f~ 144 (281)
..|.|+|||++ +.+|++||++.|+|.++..... + .....+|.+...+|+..|+ |.+.++|.
T Consensus 70 ~~L~~~V~D~d-~~~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 70 LGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp SEEEEEEEECC-SSCCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred CEEEEEEEECC-CCCCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 37999999999 8899999999999999876431 2 2445677777677876665 55666664
No 26
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.81 E-value=2.2e-19 Score=144.76 Aligned_cols=101 Identities=20% Similarity=0.250 Sum_probs=85.0
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|+||+..+..++.||||+|++.++..+ ..++||++++ ++.||+|||+|.|.+...... .
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~--------~~~~kT~~~~-~t~nP~wne~f~f~v~~~~l~--~ 83 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKR--------VEKKKTVTKK-RNLNPIFNESFAFDIPTEKLR--E 83 (138)
T ss_dssp TTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEE--------EEEEECCCCS-SCSSCEEEEEEEEECCGGGGG--G
T ss_pred CCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCc--------cceEeCcccc-CCCCCcCcceEEEECChhhcC--c
Confidence 4789999999999999998899999999999865322 1578999987 589999999999999754322 2
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcc
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDE 114 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g 114 (281)
..|.|+|+|.+.+++|++||++.|+|.++..+
T Consensus 84 ~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~~~ 115 (138)
T 3n5a_A 84 TTIIITVMDKDKLSRNDVIGKIYLSWKSGPGE 115 (138)
T ss_dssp EEEEEEEEECCSSSCCEEEEEEEESSSSCHHH
T ss_pred eEEEEEEEECCCCCCCcEEEEEEEccccCChH
Confidence 58999999999888899999999999976543
No 27
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.81 E-value=7e-20 Score=154.31 Aligned_cols=113 Identities=10% Similarity=0.026 Sum_probs=91.0
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|+||+..+..++.||||+|.+.+...++ + .++||++++ ++.||+|||+|.|.|....+. .
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~---~----~~~kT~v~~-~tlnP~wnE~F~f~v~~~~l~--~ 111 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSEST---T----CLFRTRPLD-ASDTLVFNEVFWVSMSYPALH--Q 111 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHH---H----HEEECCCEE-CCSSEEEEEEEEEECCHHHHH--H
T ss_pred CCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCC---c----cceeCCcCC-CCCCCccccEEEEEcCHHHhC--c
Confidence 46899999999999999989999999999998632211 1 478999987 589999999999999753322 2
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEE
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIR 127 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~ 127 (281)
..|+|+|||++.+++|++||++.|+|.++.... .....||.|.
T Consensus 112 ~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~--~~~~~W~~L~ 154 (155)
T 2z0u_A 112 KTLRVDVCTTDRSHLEECLGGAQISLAEVCRSG--ERSTRWYNLL 154 (155)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEEECTTSCTTC--CCEEEEEEEB
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEHHHccCCC--CccccceEcc
Confidence 489999999998889999999999999996422 2345678774
No 28
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.81 E-value=3.9e-19 Score=149.97 Aligned_cols=118 Identities=12% Similarity=0.211 Sum_probs=102.9
Q ss_pred EEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCceE
Q 040877 5 TLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNHLF 84 (281)
Q Consensus 5 ~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~~~ 84 (281)
.|+|+|++|.||+ ++.||||+|.+.+ .++||+++++++.||+|||+|+|++....+.. .+
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg-------------~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~--e~ 81 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRG-------------QSFYSRVLENCEDVADFDETFRWPVASSIDRN--EV 81 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETT-------------EEEECCCEEEECSCEEEEEEEEEEESSCCCTT--CE
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEec-------------cceeeEEeccCCCCceEcceEEecCCCCCCCC--CE
Confidence 6999999999999 5899999999965 58999999867999999999999999754433 59
Q ss_pred EEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcCCCCcc-eEEEEEEEEee
Q 040877 85 IAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGHGKPN-GVLSFCYKLKG 145 (281)
Q Consensus 85 L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~GK~~-G~L~Lsl~f~p 145 (281)
|.|+|++.+++++|++||++.|+|.+|..+. ...++-.|.+.++++- ++|.|++++.|
T Consensus 82 L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~---~l~l~~~LvD~n~~~~~a~I~l~l~Y~p 140 (144)
T 3l9b_A 82 LEIQIFNYSKVFSNKLIGTFRMVLQKVVEEN---RVEVSDTLIDDNNAIIKTSLSMEVRYQA 140 (144)
T ss_dssp EEEEEEEECTTSCCEEEEEEEEESHHHHHHS---EEEEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EEEEEEECccccCCCEEEEEEEEhHHhccCC---eEEEeecccCCCCCccccEEEEEEEecC
Confidence 9999999999999999999999999999874 2346778889888855 69999999988
No 29
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.81 E-value=6e-19 Score=158.75 Aligned_cols=127 Identities=15% Similarity=0.174 Sum_probs=104.7
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|+||...+..++.||||+|.+.++.. ++.||++++ ++.||+|||+|.|.+...... .
T Consensus 18 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~----------~~~~T~~~~-~~~nP~wne~f~f~v~~~~~~--~ 84 (284)
T 2r83_A 18 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK----------KKFETKVHR-KTLNPVFNEQFTFKVPYSELA--G 84 (284)
T ss_dssp TTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTT----------SCEECCCCC-SCSSCEEEEEEEECCCGGGCT--T
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCC----------ceEeCCccc-CCCCCeeCceEEEEechHHhC--c
Confidence 478999999999999999889999999999976421 578999987 489999999999998753222 2
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcCCC---CcceEEEEEEEEee
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGHG---KPNGVLSFCYKLKG 145 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~G---K~~G~L~Lsl~f~p 145 (281)
..|+|+|+|.+.++.|++||++.|+|.++..+. ....||.|....+ ...|.|.+++++.+
T Consensus 85 ~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~---~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p 147 (284)
T 2r83_A 85 KTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH---VTEEWRDLQSAEKEEQEKLGDICFSLRYVP 147 (284)
T ss_dssp CEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSS---CEEEEEECBCCSSCCCCCCCEEEEEEEEET
T ss_pred CEEEEEEEECCCCCCCceeEEEEEcchhcccCC---cceeEEEeeccccccccccccEEEEEEecC
Confidence 489999999998888999999999999997653 3467888876532 36799999999875
No 30
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=6.5e-20 Score=149.64 Aligned_cols=118 Identities=19% Similarity=0.224 Sum_probs=92.7
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|+||+..+..+ .||||+|++.++..+ ..++||++++ ++.||+|||+|.|.+...... .
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~--------~~~~kT~v~~-~t~nP~wne~f~f~v~~~~l~--~ 90 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRR--------SGRRKTHVSK-KTLNPVFDQSFDFSVSLPEVQ--R 90 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCS--------SSCEECCCCC-SCSSCEEEEEEEECCCHHHHH--H
T ss_pred CCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCC--------CCcccCCccC-CCCCCCcCceEEEEecHHHhC--c
Confidence 468999999999999998888 999999999764321 1588999987 599999999999998643221 2
Q ss_pred eEEEEEEEECCccCC--CeeeEEEEEechhhhcccCCceEEEEEEEEcCCCCcce
Q 040877 83 LFIAFDLYSEGVIYG--YRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGHGKPNG 135 (281)
Q Consensus 83 ~~L~~eV~d~~~~~g--Dk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~GK~~G 135 (281)
..|.|+|||++.++. |++||++.|+|.++..+. ....||.|....++..|
T Consensus 91 ~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~---~~~~W~~L~~~~~~~~G 142 (142)
T 2dmg_A 91 RTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAK---GWTQWYDLTEDSGPSSG 142 (142)
T ss_dssp CEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTT---CBCCBCCCBCSCSCCCC
T ss_pred CEEEEEEEECCCccccCCcEEEEEEEecccccccc---cccceeeccCCCCCCCC
Confidence 389999999998753 579999999999987643 23458888775555444
No 31
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.80 E-value=8.5e-19 Score=147.21 Aligned_cols=100 Identities=16% Similarity=0.144 Sum_probs=83.9
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|+||+..+.+++.||||+|.+.++..+ ..++||++++ ++.||+|||+|.|.+...... .
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~--------~~~~kT~v~~-~t~nP~wne~f~f~v~~~~l~--~ 104 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGK--------KAKHKTQIKK-KTLNPEFNEEFFYDIKHSDLA--K 104 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC-----------CCEEECCCCC-SCSSCEEEEEEEEECCGGGGG--G
T ss_pred CCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCc--------cceEeCCccc-CCCCCcccceEEEEcchHhcC--C
Confidence 4789999999999999998899999999999875321 1688999986 599999999999999753322 2
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhc
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLID 113 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~ 113 (281)
..|.|+|+|++.+++|++||++.|+|.++..
T Consensus 105 ~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~ 135 (166)
T 2cm5_A 105 KSLDISVWDYDIGKSNDYIGGCQLGISAKGE 135 (166)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEETTCCHH
T ss_pred CEEEEEEEECCCCCCCcEEEeEEEecccCCc
Confidence 4899999999988889999999999998654
No 32
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.80 E-value=9.7e-19 Score=145.66 Aligned_cols=114 Identities=15% Similarity=0.188 Sum_probs=90.9
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|+||+..+.+++.||||+|++.++..+ ..++||++++ ++.||+|||+|.|.+...... .
T Consensus 24 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~--------~~~~kT~v~~-~t~nP~wne~f~f~v~~~~l~--~ 92 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKR--------LKKKKTTIKK-NTLNPYYNESFSFEVPFEQIQ--K 92 (159)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEE--------EEEEECCCCC-SCSSCEEEEEEEEECCGGGGG--G
T ss_pred CCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCce--------eceeeCceec-CCCCCcccceEEEEcCHHHhC--C
Confidence 4689999999999999998899999999999864321 1578999976 599999999999999753322 2
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhh----------hcccCCceEEEEEEEEc
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDL----------IDEFNGAVRFVRYQIRT 128 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL----------~~g~~g~~~~vsy~L~~ 128 (281)
..|.|+|+|.+.+++|++||++.|+|.++ +.. .+.....||.|..
T Consensus 93 ~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~-~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 93 VQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLAN-PRRPIAQWHTLQV 147 (159)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHS-TTCCEEEEEECBC
T ss_pred cEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHC-CCCeeeeEEECcC
Confidence 48999999999888899999999999954 322 1234567888764
No 33
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=2.4e-19 Score=147.30 Aligned_cols=109 Identities=16% Similarity=0.160 Sum_probs=86.7
Q ss_pred ceEEEEEEEeecCCCCC-------CCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEecc
Q 040877 3 WSTLELKVNSCSDLKAF-------NLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKA 75 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~-------~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~ 75 (281)
.+.|+|+|++|+||+.. +.+++.||||+|++.++.. +++||++++ ++.||+|||+|.|.+..
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~----------~~~kT~v~~-~t~nP~wne~f~f~v~~ 93 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQK----------NSKQTGVKR-KTQKPVFEERYTFEIPF 93 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCS----------SCEECCCCC-SCSSCCCCBCCEECCCH
T ss_pred CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCC----------cceEeeccc-CCCCCeEeeeEEEEeCh
Confidence 46899999999999974 3356899999999986421 578999976 59999999999999874
Q ss_pred CccCCCceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEE
Q 040877 76 FVDNCNHLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIR 127 (281)
Q Consensus 76 ~~~~~~~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~ 127 (281)
.... ...|+|+|||++.+++|++||++.|+|.+|..+.. ...||.|.
T Consensus 94 ~~l~--~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~---~~~w~~L~ 140 (147)
T 2enp_A 94 LEAQ--RRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKG---GHWWKALI 140 (147)
T ss_dssp HHHH--HSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTC---CCEEECCB
T ss_pred HHhc--cCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCC---ccEEEEee
Confidence 3221 13899999999988889999999999999976432 24566664
No 34
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.79 E-value=1.1e-18 Score=144.35 Aligned_cols=97 Identities=16% Similarity=0.193 Sum_probs=77.2
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|+||+..+..++.||||+|.+.++..+ ..++||++++ ++.||+|||+|.|.+...... .
T Consensus 29 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~--------~~~~kT~v~~-~t~nP~wne~f~f~v~~~~l~--~ 97 (153)
T 1w15_A 29 TNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKR--------ISKKKTHVKK-CTPNAVFNELFVFDIPCESLE--E 97 (153)
T ss_dssp TTEEEEEEEEEESCC------CCCEEEEEEEEETTEE--------EEEEECCCCC-SCSSEEEEEEEEEECCSSSST--T
T ss_pred CCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeE--------eceEecCccc-CCCCCeecceEEEECCHHHhC--c
Confidence 4689999999999999998899999999999764221 1477999987 499999999999999754332 2
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechh
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKD 110 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~d 110 (281)
..|.|+|+|++.+++|++||++.|+|.+
T Consensus 98 ~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 98 ISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred eEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 5899999999988889999999999998
No 35
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.79 E-value=1e-19 Score=148.17 Aligned_cols=121 Identities=14% Similarity=0.141 Sum_probs=90.5
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhh-hhccccceEEeeecCCCCCCCeeceEEEEE-eccCccCC
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKE-QRQTCLQRQKTPTDREGGGNPEWNHMMKFD-IKAFVDNC 80 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~-~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~-V~~~~~~~ 80 (281)
.+.|+|+|++|+||+..+.+++.||||+|++.+......- +......++||++++ ++.||+|||+|.|. +......
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~-~t~nP~wne~f~f~~v~~~~l~- 94 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQ-KSLNPEWNQTVIYKSISMEQLM- 94 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTH-HHHSCEEEEEEEECSCCHHHHT-
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccC-CCCCCCCCCEEEECCcCHHHcc-
Confidence 3689999999999999998999999999999764210000 000000357899987 48999999999997 6532211
Q ss_pred CceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcC
Q 040877 81 NHLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTG 129 (281)
Q Consensus 81 ~~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~ 129 (281)
...|.|+|||++.+++|++||++.|+|.++..+.. ...||+|...
T Consensus 95 -~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~---~~~W~~L~~~ 139 (142)
T 1rh8_A 95 -KKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDN---TPRWYPLKEQ 139 (142)
T ss_dssp -TCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTT---CCEEEECBCC
T ss_pred -CCEEEEEEEECCCCCCCceEEEEEEeccccccCCC---CCeEEECCcc
Confidence 24899999999988889999999999999976532 3468888654
No 36
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.78 E-value=8.8e-19 Score=148.65 Aligned_cols=110 Identities=15% Similarity=0.137 Sum_probs=90.0
Q ss_pred ceEEEEEEEeecCCCCCCC-CCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCC
Q 040877 3 WSTLELKVNSCSDLKAFNL-FNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCN 81 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~-~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~ 81 (281)
.+.|+|+|++|+||+..+. +++.||||+|.+.++... ..++||++++ ++.||+|||+|.|.+...
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~--------~~~~kT~v~~-~t~nP~wne~f~f~v~~~----- 94 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGAC--------IAKKKTRIAR-KTLDPLYQQSLVFDESPQ----- 94 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEE--------EEEEECCCCC-SCSSCEEEEEEECSSCCT-----
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCcc--------ccceeCccCC-CCCCCCCCcEEEEEecCC-----
Confidence 4689999999999999885 699999999999874221 1478999986 589999999999998632
Q ss_pred ceEEEEEEE-ECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcC
Q 040877 82 HLFIAFDLY-SEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTG 129 (281)
Q Consensus 82 ~~~L~~eV~-d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~ 129 (281)
...|.|+|| |++.+++|++||++.|+|.++..+. ....||.|...
T Consensus 95 ~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~---~~~~W~~L~~~ 140 (171)
T 2q3x_A 95 GKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSS---MVIGWYKLFPP 140 (171)
T ss_dssp TEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTS---CEEEEEECBCG
T ss_pred CCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCC---CcceeEECCCc
Confidence 258999999 9998888999999999999997543 34678998764
No 37
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.77 E-value=6.2e-18 Score=171.02 Aligned_cols=124 Identities=15% Similarity=0.207 Sum_probs=104.2
Q ss_pred ceEEEEEEEeecCCCCCCC--CCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCC
Q 040877 3 WSTLELKVNSCSDLKAFNL--FNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNC 80 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~--~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~ 80 (281)
.+.|+|+|++|++|+..+. .++.||||+|++.+.+.+. .++||++++++|.||+|||+|.|.|....
T Consensus 496 ~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~--------~~~kTkvi~~ng~NP~WnE~f~F~v~~~e--- 564 (624)
T 1djx_A 496 PERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDT--------GSRQTAVITNNGFNPRWDMEFEFEVTVPD--- 564 (624)
T ss_dssp CEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGC--------EEEECCCCTTCSSSCEEEEEEEEEESCGG---
T ss_pred ceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCc--------ceeecccccCCCCCCccCceEEEEEecCC---
Confidence 3689999999999998774 6889999999998754332 58899999887899999999999997543
Q ss_pred CceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcCCCCc--ceEEEEEEEEe
Q 040877 81 NHLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGHGKP--NGVLSFCYKLK 144 (281)
Q Consensus 81 ~~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~GK~--~G~L~Lsl~f~ 144 (281)
...|+|+|+|++.+++|++||++.|+|.+|..|+ .+++|++..|+. .+.|.+.++|.
T Consensus 565 -l~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~------r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 565 -LALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGY------RHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp -GCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEE------EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred -CCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCc------EEEeCCCCCcCCCCceEEEEEEEEE
Confidence 2589999999998889999999999999998763 478999988885 46777777664
No 38
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=2.7e-18 Score=140.47 Aligned_cols=109 Identities=10% Similarity=0.001 Sum_probs=87.1
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|++ .+..++.||||+|.+.++..+ .++||++++ ++.||+|||+|.|.+.......
T Consensus 25 ~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~---------~~~kT~v~~-~tlnP~wnE~f~f~v~~~~l~~-- 89 (138)
T 1wfm_A 25 KAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGS---------VEAQTALKK-RQLHTTWEEGLVLPLAEEELPT-- 89 (138)
T ss_dssp TTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEE---------EEEECCCCC-CCSSEECSSCEEEECCTTSSTT--
T ss_pred CCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCc---------ccEecccCc-CCCCCcCCceEEEEecHHHcCC--
Confidence 4789999999994 566789999999999753111 478999976 5899999999999987543322
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcC
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTG 129 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~ 129 (281)
..|+|+|||.+.+++|++||++.|+|.++..+. ....||.|...
T Consensus 90 ~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~---~~~~W~~L~~~ 133 (138)
T 1wfm_A 90 ATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPL---GAAQWGELKTS 133 (138)
T ss_dssp CEEEEEEEECCSSCTTSCSEEEEEESSSSSSCT---TCCEEEECCCC
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEcccccCcc---cccceeeCcCC
Confidence 489999999998888999999999999986432 23568888653
No 39
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.76 E-value=6.2e-18 Score=154.37 Aligned_cols=128 Identities=19% Similarity=0.167 Sum_probs=99.4
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|.|+|++|+||+..+.+++.||||+|.+..+.. +++||++++ ++.||+|||+|.|.+.......
T Consensus 19 ~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~----------~~~kT~v~~-~t~nP~wne~f~f~v~~~~l~~-- 85 (296)
T 1dqv_A 19 SDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRK----------KKFQTKVHR-KTLNPIFNETFQFSVPLAELAQ-- 85 (296)
T ss_dssp SCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTT----------SCEECCCCC-SCSSCEEEEEEEEECCGGGGSS--
T ss_pred CCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCC----------eeEeCCccC-CCCCCcEeeEEEEEecHHHhcC--
Confidence 478999999999999999899999999999964321 578999976 5899999999999997433222
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEe-chhhhcccCCceEEEEEEEEcCC--CCcceEEEEEEEEee
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVP-LKDLIDEFNGAVRFVRYQIRTGH--GKPNGVLSFCYKLKG 145 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~Vp-L~dL~~g~~g~~~~vsy~L~~~~--GK~~G~L~Lsl~f~p 145 (281)
..|+|+|||.+.+++|++||++.|+ |.++.+... ....|+.|.... ....|+|.+++.+.+
T Consensus 86 ~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~--~~~~w~~L~~~~~~~~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 86 RKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPP--DRPLWRDILEGGSEKADLGELNFSLCYLP 149 (296)
T ss_dssp CCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCS--SCCCCEECBCCSSCCSCCCEEEEEEEEET
T ss_pred CEEEEEEEEcCCCCCCceEEEEEeccccccccCCc--cceeeeccccccccccccceEEEEEEecc
Confidence 3799999999988889999999996 555554221 123466665433 335799999998865
No 40
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.72 E-value=2.5e-17 Score=159.48 Aligned_cols=121 Identities=21% Similarity=0.311 Sum_probs=98.7
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.++|+|+|++|++|+..+.+|+.||||+|.+.+ +++||++++ ++.||+|||+|.|.+.... .
T Consensus 386 ~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~-------------~~~~T~~~~-~t~nP~w~e~f~f~~~~~~----~ 447 (510)
T 3jzy_A 386 IGRLMVHVIEATELKACKPNGKSNPYCEISMGS-------------QSYTTRTIQ-DTLNPKWNFNCQFFIKDLY----Q 447 (510)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT-------------EEEECCCCS-SCSSCEEEEEEEEEESCTT----T
T ss_pred CceEEEEeceeecCCCCCCCCCCCeEEEEEECC-------------eeccCCccC-CCCCCccCceEEEEecCCC----C
Confidence 368999999999999999999999999999954 588999987 4799999999999997432 1
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCC-ceEEEEEEEEcCCCCcceEEEEEEEEe
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNG-AVRFVRYQIRTGHGKPNGVLSFCYKLK 144 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g-~~~~vsy~L~~~~GK~~G~L~Lsl~f~ 144 (281)
..|+|+|||++.+++|++||++.++|.++..+... .....|+.+ .++..|+|+|.+++.
T Consensus 448 ~~l~~~v~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l---~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 448 DVLCLTLFDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLL---HEVPTGEVWVRFDLQ 507 (510)
T ss_dssp CEEEEEEEECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEEC---BSSSSCEEEEEEEEE
T ss_pred CEEEEEEEeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecC---CCCCCceEEEEEEEE
Confidence 48999999999888899999999999999875421 112345554 356789998887763
No 41
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.68 E-value=3.8e-16 Score=140.43 Aligned_cols=115 Identities=16% Similarity=0.179 Sum_probs=90.9
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|.|+|++|+||+..+.+++.||||+|++.++..+ ..++||++++ ++.||+|||+|.|.+....+. .
T Consensus 149 ~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~--------~~~~kT~v~~-~t~nP~wne~f~f~v~~~~l~--~ 217 (284)
T 2r83_A 149 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKR--------LKKKKTTIKK-NTLNPYYNESFSFEVPFEQIQ--K 217 (284)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEE--------EEEEECCCCC-SCSSCEEEEEEEEECCTTTGG--G
T ss_pred CCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcE--------eeeeccceec-CCCCCEEceeEEEeCCHHHhC--c
Confidence 4689999999999999998899999999999764321 1478999976 589999999999999754322 2
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhccc---------CCceEEEEEEEEc
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEF---------NGAVRFVRYQIRT 128 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~---------~g~~~~vsy~L~~ 128 (281)
..|.|+|+|.+.+++|++||++.|+|..+..+. .+.....||.|..
T Consensus 218 ~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 218 VQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp EEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred eEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 589999999998888999999999998643321 1233467888764
No 42
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.67 E-value=4.2e-16 Score=155.45 Aligned_cols=112 Identities=15% Similarity=0.186 Sum_probs=90.7
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|+||+. |.+++.||||+|.+.+ ++.||+|+++ +.||+|||+|.|.+..... .
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~-------------~~~kTkvik~-tlNP~Wne~f~f~~~~~~~---~ 454 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGG-------------QEFRTGVVWN-NNNPRWTDKMDFENVLLST---G 454 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEETT-------------EEEECCCBCS-CSSCBCCCCEEEEEEETTT---C
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEECC-------------EeeeeeeecC-CCCCCCCeEEEEEEecCCC---C
Confidence 3689999999999998 9899999999999965 4789999874 8999999999998753221 1
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcCCCCcceEEEEEEEEee
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGHGKPNGVLSFCYKLKG 145 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~GK~~G~L~Lsl~f~p 145 (281)
..|+|+|||+|.+..|++||++.++|.. | . ...++.| .+|.|+|++++.=
T Consensus 455 ~~L~~~V~D~D~~~~dD~LG~~~~~L~~---g---~-~~~~~~l------~~G~l~~~~~~~c 504 (540)
T 3nsj_A 455 GPLRVQVWDADYGWDDDLLGSCDRSPHS---G---F-HEVTCEL------NHGRVKFSYHAKC 504 (540)
T ss_dssp CCEEEEEEECCSSSCCEEEEEEEECCCS---E---E-EEEEEEC------SSSEEEEEEEEEE
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEEeeC---C---c-EEEEEEc------CCeEEEEEEEEEE
Confidence 3799999999988889999999999972 2 2 3345543 4689999988654
No 43
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.61 E-value=5.2e-15 Score=154.80 Aligned_cols=117 Identities=17% Similarity=0.267 Sum_probs=95.1
Q ss_pred eEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeece-EEEEE-eccCccCCC
Q 040877 4 STLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNH-MMKFD-IKAFVDNCN 81 (281)
Q Consensus 4 g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNE-tf~F~-V~~~~~~~~ 81 (281)
.+|+|+||+|++|... +.||||+|.|.+.+.+. ..++||+|++++|.||+||| +|.|. |....
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~-------~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pe---- 789 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDT-------RRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPT---- 789 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTC-------BCCCCCCCCSSCSSSCBCCCCCEEEEEESCGG----
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCccc-------ccceeeEEeeCCCcCCeeccceeEEeeEEcCC----
Confidence 4799999999999863 68999999998854432 13579999988899999999 69998 65332
Q ss_pred ceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcCCCCc--ceEEEEEEEEee
Q 040877 82 HLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGHGKP--NGVLSFCYKLKG 145 (281)
Q Consensus 82 ~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~GK~--~G~L~Lsl~f~p 145 (281)
...|+|+|+|++ |++||++.|||.+|..|+ ...+|++..|.. .|.|-+.+.+..
T Consensus 790 la~Lrf~V~D~d----ddfiG~~~lpL~~L~~Gy------R~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 790 LASLRIAAFEEG----GKFVGHRILPVSAIRSGY------HYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp GCEEEEEEEETT----TEEEEEEEEETTTCCCEE------EEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred cCEEEEEEEcCC----ccEEeeEEEEHHHcCCCc------eEEEecCCCCCccCceEEEEEEEEEe
Confidence 358999999976 899999999999998874 356889988874 678888777765
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.60 E-value=3.6e-16 Score=142.69 Aligned_cols=100 Identities=21% Similarity=0.243 Sum_probs=84.1
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|+|+|++|+||+..+..++.||||+|++.++... ..++||++++ ++.||+|||+|.|.|....+. .
T Consensus 151 ~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~--------~~~~kT~v~~-~t~nP~wne~f~f~v~~~~l~--~ 219 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRR--------LKKRKTSIKK-NTLNPTYNEALVFDVAPESVE--N 219 (296)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCT--------TSCEECCCCC-SCSSCEEEECCCCCCCSGGGG--S
T ss_pred cceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcC--------ccceecceec-CCCCCeECceEEEEcCHHHcc--C
Confidence 4789999999999999998999999999999754221 2578999976 589999999999999854332 2
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhc
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLID 113 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~ 113 (281)
..|.|+|+|.+.+++|++||++.|+|.++..
T Consensus 220 ~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 220 VGLSIAVVDYDCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp CCCCCEEEECCSSSCCEEEEECCCSSCTTCH
T ss_pred cEEEEEEEeCCCCCCCceEEEEEECCccCCc
Confidence 4799999999988889999999999998754
No 45
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.60 E-value=8.7e-15 Score=151.81 Aligned_cols=116 Identities=18% Similarity=0.240 Sum_probs=92.0
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEee-ecCCCCCCCeece-EEEE-EeccCccC
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTP-TDREGGGNPEWNH-MMKF-DIKAFVDN 79 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTk-V~~~gg~NPvWNE-tf~F-~V~~~~~~ 79 (281)
.++|+|+||+|++|++ ++.||||+|.|.+.+.+. .+++||+ +++++|.||+||| +|.| .|....
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~-------~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~e-- 743 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDP-------KRRYRTKLSPSTNSINPVWKEEPFVFEKILMPE-- 743 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSC-------CCCEECCCCSSSCCSSCBCCCCCEEEEEESSGG--
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCc-------ccceeecccccCCCCCCeeecceEEEEEEccCC--
Confidence 3689999999999985 468999999998754332 1467999 8888899999999 7999 886433
Q ss_pred CCceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcCCCCc--ceEEEEEEEE
Q 040877 80 CNHLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGHGKP--NGVLSFCYKL 143 (281)
Q Consensus 80 ~~~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~GK~--~G~L~Lsl~f 143 (281)
..+|+|+|+|++ |++||++.|||.+|..|+ .+++|++..|.+ .+.|.+.+++
T Consensus 744 --l~~Lr~~V~D~d----~d~iG~~~ipl~~L~~G~------r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 744 --LASLRVAVMEEG----NKFLGHRIIPINALNSGY------HHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp --GCEEEEEEEETT----TEEEEEEEEEGGGBCCEE------EEEEEECTTCCEEEEEEEEEEEEE
T ss_pred --ccEEEEEEEEeC----CCccceEeeehhhcCCCc------EEEeccCCCCCCCCceEEEEEEEE
Confidence 358999999976 899999999999998764 467888887773 3566665554
No 46
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.59 E-value=1.3e-14 Score=150.87 Aligned_cols=118 Identities=18% Similarity=0.200 Sum_probs=93.9
Q ss_pred eEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceE-EEEE-eccCccCCC
Q 040877 4 STLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHM-MKFD-IKAFVDNCN 81 (281)
Q Consensus 4 g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEt-f~F~-V~~~~~~~~ 81 (281)
++|+|+||+|++|.+. +.||||+|+|.+.+.+.. .+++||++++++|.||+|||+ |.|. |....
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~------~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pe---- 715 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTV------RKKFKTKIIENNGMDPYYDEKVFVFKKVVLPD---- 715 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCE------EEEEECCCBCSCSSCCBCCCCCEEEEEESCGG----
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccc------cceeeeEEecCCCCCCeEcCceeEEccccCCC----
Confidence 6799999999999863 589999999998644320 147799999988999999998 9998 75432
Q ss_pred ceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcCCCCcc--eEEEEEEEEee
Q 040877 82 HLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGHGKPN--GVLSFCYKLKG 145 (281)
Q Consensus 82 ~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~GK~~--G~L~Lsl~f~p 145 (281)
..+|+|+|+|++ |++||++.|||.+|..|+ ...+|++.+|+.- +.|-+.+.+..
T Consensus 716 la~Lrf~V~D~d----ddfiG~~~ipL~~L~~Gy------R~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 716 LAVVRIIVSEEN----GKFIGHRVMPLDGIKPGY------RHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp GCEEEEEEEETT----SCEEEEEEEESTTCCCEE------EEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred ccEEEEEEEecC----CCeeeEEEEEHHHcCCcc------eEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 358999999974 799999999999998875 3578889888854 56666555554
No 47
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.56 E-value=2.2e-16 Score=154.77 Aligned_cols=119 Identities=16% Similarity=0.206 Sum_probs=19.0
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCC--CCCCCeeceEEEEEeccCccCC
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDRE--GGGNPEWNHMMKFDIKAFVDNC 80 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~--gg~NPvWNEtf~F~V~~~~~~~ 80 (281)
.+.|+|+|++|+||+..+ ||||++.+++. .+.||++.++ +|.||+|||+|.|.+....
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~------------~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~--- 69 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDM------------LYARTTSKPRSASGDTVFWGEHFEFNNLPAV--- 69 (483)
T ss_dssp EECC--------------------------------------------------------------CCEECC--------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCe------------EEeeeeEEeCCCCCCCCccccEEEEecCCCc---
Confidence 368999999999999876 99999999763 3668888764 2499999999999975321
Q ss_pred CceEEEEEEEEC-C---ccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcCC-----------------------C-C
Q 040877 81 NHLFIAFDLYSE-G---VIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGH-----------------------G-K 132 (281)
Q Consensus 81 ~~~~L~~eV~d~-~---~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~-----------------------G-K 132 (281)
..|.|+|||+ + .+.+|++||.+.|+|.++..+. ....||+|.... | +
T Consensus 70 --~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~---~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 144 (483)
T 3bxj_A 70 --RALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRH---FTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKG 144 (483)
T ss_dssp ------------------------------------------CCEECC--------------------------------
T ss_pred --cEEEEEEEecCCccccCCCCceEEEEEEEHHHhcCCC---CCCeEEECCCCCCccccccccccccccccccccccCCC
Confidence 3789999995 3 3578999999999999998753 235678885432 1 2
Q ss_pred cceEEEEEEEEeee
Q 040877 133 PNGVLSFCYKLKGM 146 (281)
Q Consensus 133 ~~G~L~Lsl~f~p~ 146 (281)
..|.|+|.++|.+.
T Consensus 145 ~~G~lrL~v~~~~~ 158 (483)
T 3bxj_A 145 GCPAVRLKARYQTM 158 (483)
T ss_dssp ------CEEEEEEC
T ss_pred CCceEEEEEEeeee
Confidence 46899999999873
No 48
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.55 E-value=5.8e-15 Score=152.13 Aligned_cols=106 Identities=12% Similarity=0.173 Sum_probs=88.6
Q ss_pred ceEEEEEEEeecCCCC---CCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccC
Q 040877 3 WSTLELKVNSCSDLKA---FNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDN 79 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~---~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~ 79 (281)
.+.|+|+|++|++|+. .+..+++||||+|++.+... .++||++++ ++.||+|||+|.|.+....
T Consensus 17 ~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~----------~k~kTkvik-~tlNPvWNEtF~F~v~~~~-- 83 (749)
T 1cjy_A 17 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPD----------SRKRTRHFN-NDINPVWNETFEFILDPNQ-- 83 (749)
T ss_dssp CEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTT----------CCEECCCCT-TCSSCEEEEEEEEEECTTS--
T ss_pred ccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCC----------CeEecceEc-CCCCCeeeeEEEEEecCCC--
Confidence 4789999999999998 77789999999999976421 588999987 5899999999999998532
Q ss_pred CCceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEE
Q 040877 80 CNHLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIR 127 (281)
Q Consensus 80 ~~~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~ 127 (281)
...|+|+|+|++.++ |++||++.|+|.+|..+. ....|++|.
T Consensus 84 --~~~L~~~V~D~D~~~-ddfIG~v~I~L~~L~~g~---~~~~w~~L~ 125 (749)
T 1cjy_A 84 --ENVLEITLMDANYVM-DETLGTATFTVSSMKVGE---KKEVPFIFN 125 (749)
T ss_dssp --CCBCEEEEEECCSSS-CEEEEEECCBSTTSCTTC---CCCEEEEET
T ss_pred --CCEEEEEEEECCCCC-CceeEEEEEEHHHcCCCC---ceEEEEecC
Confidence 237999999999887 999999999999997654 234677773
No 49
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.50 E-value=1e-13 Score=140.21 Aligned_cols=111 Identities=16% Similarity=0.230 Sum_probs=92.0
Q ss_pred ceEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 3 WSTLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 3 ~g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
.+.|.|+|++|++|...+.++++||||++.+.++.... .++||+++++ +.||+|||+|.|.+..... .
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~--------~k~kT~v~~~-tlnP~wne~f~f~~~~~~~---~ 238 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSE--------SKQKTKTIKS-SLNPEWNETFRFQLKESDK---D 238 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCC--------SCEECCCCSS-CSSCEEEEEEEEECCSTTT---T
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCcccc--------cccccccccc-ccCCCccceeeeecccCCc---c
Confidence 46799999999999999999999999999997654321 5789999874 7999999999999975432 1
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcC
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTG 129 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~ 129 (281)
..|.|+|||.+.+++|++||++.++|.++.... ...||.+...
T Consensus 239 ~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~----~~~w~~Lls~ 281 (674)
T 3pfq_A 239 RRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG----VDGWFKLLSQ 281 (674)
T ss_dssp CEEEEEEEECCSSSCCEECCBCCCBTTHHHHCC----EEEEEECBCT
T ss_pred ceeeeEEeecccccccccccccccchhhhccCC----cccceeeccc
Confidence 369999999999889999999999999998753 2557776653
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.93 E-value=3.3e-08 Score=81.49 Aligned_cols=116 Identities=16% Similarity=0.139 Sum_probs=82.1
Q ss_pred eEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCce
Q 040877 4 STLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNHL 83 (281)
Q Consensus 4 g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~~ 83 (281)
..|+|.+.+++.-.-.......||||.|.+...-. ..+.||-+.+..+..|+|||.|.-.|.+. -
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~---------~e~g~t~~~K~kT~~P~Wne~Fd~~V~~G------r 70 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALS---------TERGKTLVQKKPTMYPEWKSTFDAHIYEG------R 70 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEE---------ETTEEEEECCSCCBCCCTTCEEEEECCTT------C
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEE---------cccceeecccCCCCCcCccceEEeeeeCC------E
Confidence 46888887776422111223589999999974310 01335544456799999999999999753 2
Q ss_pred EEEEEEEECCccCCCeeeEEEEEechhhhcc---cCCceEEEEEEEEcCCCCcceEEEEEEEEe
Q 040877 84 FIAFDLYSEGVIYGYRSIGKVHVPLKDLIDE---FNGAVRFVRYQIRTGHGKPNGVLSFCYKLK 144 (281)
Q Consensus 84 ~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g---~~g~~~~vsy~L~~~~GK~~G~L~Lsl~f~ 144 (281)
.|.|.|++... ++|+.++|+|.+|++. .++ ....|..| +++|.|++.+++.
T Consensus 71 ~l~i~Vfh~a~----~fvAn~tV~~edL~~~c~~~~g-~~e~WvdL-----eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 71 VIQIVLMRAAE----EPVSEVTVGVSVLAERCKKNNG-KAEFWLDL-----QPQAKVLMSVQYF 124 (126)
T ss_dssp EEEEEEEEETT----EEEEEEEEEHHHHHHHHHTTTT-EEEEEEEC-----BSSCEEEEEEEEE
T ss_pred EEEEEEEcCCC----CeeeEEEEEHHHHHhhhccCCC-ceEEEEec-----ccCcEEEEEEEEe
Confidence 78999986553 9999999999999976 333 44566554 7899999988874
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.80 E-value=4.8e-08 Score=81.60 Aligned_cols=116 Identities=14% Similarity=0.144 Sum_probs=81.0
Q ss_pred eEEEEEEEeecCCCCCC-CCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCc
Q 040877 4 STLELKVNSCSDLKAFN-LFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNH 82 (281)
Q Consensus 4 g~LeVtViSAkdLk~~~-~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~ 82 (281)
..|+|.+.+++...-.. .....||||.|.+.-.-. ..+.||-+.+..+..|+|||.|.-.|.+.
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~---------te~gqtl~~KkkT~~P~Wne~Fd~~V~~G------ 74 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVE---------SENGQMYIQKKPTMYPPWDSTFDAHINKG------ 74 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEE---------ETTEEEEEEEEEEECCCSSSEEEECCCSS------
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeeee---------ccCceeecccCCCCCccccceEeeeEECC------
Confidence 56889888876544221 123579999999974310 01244422233477999999999999753
Q ss_pred eEEEEEEEECCccCCCeeeEEEEEechhhhcc---cCCceEEEEEEEEcCCCCcceEEEEEEEEe
Q 040877 83 LFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDE---FNGAVRFVRYQIRTGHGKPNGVLSFCYKLK 144 (281)
Q Consensus 83 ~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g---~~g~~~~vsy~L~~~~GK~~G~L~Lsl~f~ 144 (281)
-.|.|.|++... ++|+.++|+|.+|++. .++ ....|..| +++|.|++.+++.
T Consensus 75 r~l~i~Vfh~a~----~fVAn~tV~~edL~~~ck~~~g-~~e~WvdL-----eP~Gkl~v~i~~~ 129 (138)
T 2enj_A 75 RVMQIIVKGKNV----DLISETTVELYSLAERCRKNNG-KTEIWLEL-----KPQGRMLMNARYF 129 (138)
T ss_dssp CEEEEEEECSSC----SCCEEEEEESHHHHHHHHHTTT-CEEEEEEC-----BSSCEEEEEEEEC
T ss_pred eEEEEEEEcCCC----CeeeEEEEEHHHHHhhhccCCC-ceEEEEec-----ccCcEEEEEEEEE
Confidence 278999985442 8999999999999976 333 34566554 7899999999885
No 52
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=95.73 E-value=0.057 Score=57.94 Aligned_cols=95 Identities=16% Similarity=0.132 Sum_probs=60.1
Q ss_pred eEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCce
Q 040877 4 STLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNHL 83 (281)
Q Consensus 4 g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~~ 83 (281)
+.+.|+|+++.++... .....+.||.+.|..+.. ..+...+|+.. .+.|+.|||.++|++.=..+.. .+
T Consensus 355 ~~f~v~i~~~~~~n~~-~~~~~~~~V~~~l~hG~~-------~L~~~~~T~~~--~~~~~~Wne~l~f~i~i~dLPr-~a 423 (1091)
T 3hhm_A 355 SALRIKILCATYVNVN-IRDIDKIYVRTGIYHGGE-------PLCDNVNTQRV--PCSNPRWNEWLNYDIYIPDLPR-AA 423 (1091)
T ss_dssp SEEEEEEEEESCCCCC-CSSCCCCCEEEEEESSSC-------SSCCEECCCCC--CTTSCEEEEEEEEEEEGGGCCT-TC
T ss_pred CCEEEEEEEecCCCCC-ccccceEEEEEEEEECCE-------EccCceecccc--CCCCCCCCeeEEecCccccCCh-hc
Confidence 5789999999988632 223468899999986532 12244556543 3678899999999986322322 36
Q ss_pred EEEEEEEECCccC----CCeeeEEEEEech
Q 040877 84 FIAFDLYSEGVIY----GYRSIGKVHVPLK 109 (281)
Q Consensus 84 ~L~~eV~d~~~~~----gDk~IG~v~VpL~ 109 (281)
.|.|.|++..... ....||++.++|=
T Consensus 424 rL~~tl~~~~~~~~~~~~~~~lg~~n~~lf 453 (1091)
T 3hhm_A 424 RLCLSICSVKGRKGAKEEHCPLAWGNINLF 453 (1091)
T ss_dssp EEEEEECCCCCCC-------CCEEEEEESB
T ss_pred EEEEEEEEecCccCcccccceeEEeeeeeE
Confidence 8999999754311 1234555555553
No 53
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=95.29 E-value=0.082 Score=55.98 Aligned_cols=77 Identities=14% Similarity=0.250 Sum_probs=51.4
Q ss_pred eEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCce
Q 040877 4 STLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNHL 83 (281)
Q Consensus 4 g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~~ 83 (281)
..|.|+|+++.++... ...+-||.+.|..+... .+....|+-. ..+.++.|||.++|++.=..+.. .+
T Consensus 217 ~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~-------l~~~~~T~~~-~~~~~~~Wne~l~f~i~i~dLPr-~a 284 (940)
T 2wxf_A 217 QPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEM-------LCKTVSSSEV-NVCSEPVWKQRLEFDISVCDLPR-MA 284 (940)
T ss_dssp SEEEEEEEEEECCCC------CEEEEEEEEEETTEE-------SSCCEECCCE-ESCSSCEEEEEEEEEEEGGGCCT-TC
T ss_pred CceEEEEEEecccCCC---CCceEEEEEEEEECCEE-------ccCceecccc-cCCCCcccceEEEcccccccCCc-cc
Confidence 5799999999998643 34789999988765311 1233444432 23678999999999887332332 26
Q ss_pred EEEEEEEEC
Q 040877 84 FIAFDLYSE 92 (281)
Q Consensus 84 ~L~~eV~d~ 92 (281)
.|.|.||+.
T Consensus 285 ~L~~ti~~~ 293 (940)
T 2wxf_A 285 RLCFALYAV 293 (940)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 888999874
No 54
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=95.17 E-value=0.094 Score=44.40 Aligned_cols=125 Identities=14% Similarity=0.227 Sum_probs=81.1
Q ss_pred eEEEEEEEeecCCCCC-CCCCCCCeEE--EEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCc--c
Q 040877 4 STLELKVNSCSDLKAF-NLFNRLSVYS--VVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFV--D 78 (281)
Q Consensus 4 g~LeVtViSAkdLk~~-~~~gk~DPYV--vV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~--~ 78 (281)
..+||.|..+.==+.. ...+..+|.. .+.+..- ..+.|.+.+ |.+|.+|-+..|.|.... +
T Consensus 18 nlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~df------------Etq~Tpv~~--G~~p~y~fts~Y~V~~d~~fl 83 (156)
T 2yrb_A 18 NLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDF------------ELQTTPVVR--GLHPEYNFTSQYLVHVNDLFL 83 (156)
T ss_dssp EEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTC------------CCEECCCEE--SSSCCCCEEEEEEECCSHHHH
T ss_pred cEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEece------------Eeeeccccc--CCCCCcceEEEEEEEeCHHHH
Confidence 4689999888621111 1112334544 4444332 477888875 899999999998886321 1
Q ss_pred C-CCceEEEEEEEECCccCCCeeeEEEEEechhhhcccCCceEEEEEEEEcCCC--CcceEEEEEEEEee
Q 040877 79 N-CNHLFIAFDLYSEGVIYGYRSIGKVHVPLKDLIDEFNGAVRFVRYQIRTGHG--KPNGVLSFCYKLKG 145 (281)
Q Consensus 79 ~-~~~~~L~~eV~d~~~~~gDk~IG~v~VpL~dL~~g~~g~~~~vsy~L~~~~G--K~~G~L~Lsl~f~p 145 (281)
+ -....|++|+..... ..-+.||.++|+|.+|++.... ......|...+| ..-|.|.+.+++.-
T Consensus 84 ~yL~~~~l~lELhqa~g-~~~~tla~~~I~l~~lLe~~~~--i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 84 QYIQKNTITLEVHQAYS-TEYETIAACQLKFHEILEKSGR--IFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp HHHHHCCEEEEEEEECS-SCEEEEEEEEECCSHHHHCCSC--EEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred HHHhcCCEEEEEEEeeC-CCceEEEEEEEEhHHhhCcCCc--eEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 0 011268888877541 2346899999999999986432 223446777777 46799999999975
No 55
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=94.10 E-value=0.8 Score=40.70 Aligned_cols=58 Identities=16% Similarity=0.111 Sum_probs=39.5
Q ss_pred ceEEeeecCCCCCCCeeceEEEEEeccCccCCCceEEEEEEEECCcc----CCCeeeEEEEEech
Q 040877 49 QRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNHLFIAFDLYSEGVI----YGYRSIGKVHVPLK 109 (281)
Q Consensus 49 ~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~~~L~~eV~d~~~~----~gDk~IG~v~VpL~ 109 (281)
...+|.|.. ...+|.|+|+|.+.|+.... ...-|.|+++.-..- ..++.+|.+-+||-
T Consensus 77 se~~S~V~Y-Hnk~P~w~EtIKi~LP~~~~--~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 77 SEYKSVIYY-QVKQPRWFETVKVAIPIEDV--NRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp SCEECCCCT-TCSSCCCCEEEEEEECTTSS--TTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eeEEEEEEE-cCCCCCceEeEEEeeChhhc--CCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 567887764 57899999999999996533 236888888753311 11345777777664
No 56
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=92.62 E-value=0.14 Score=55.02 Aligned_cols=77 Identities=14% Similarity=0.232 Sum_probs=51.8
Q ss_pred eEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCce
Q 040877 4 STLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNHL 83 (281)
Q Consensus 4 g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~~ 83 (281)
+.+.|+|+++.+|... ...+.||.+.|..+... .+...+|+-. ..+.++.|||.++|++.=..+.. .+
T Consensus 353 ~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~-------L~~~~~T~~~-~~~~~~~Wnewl~f~i~~~dLPr-~a 420 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTEL-------LCKTVVSSEI-SGKNDHIWNEQLEFDINICDLPR-MA 420 (1092)
T ss_dssp SEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEE-------SSCCCBCCCC-CSSSCCCCCEEEEEEEESSSCCT-TC
T ss_pred CCEEEEEEEeccCCCC---CCceEEEEEEEEECCEE-------ccCceecccc-cCCCCCccceeEEeCCccccCCh-hc
Confidence 6799999999988643 34688888777754211 1233345432 23678999999999887333333 36
Q ss_pred EEEEEEEEC
Q 040877 84 FIAFDLYSE 92 (281)
Q Consensus 84 ~L~~eV~d~ 92 (281)
.|.|.||+.
T Consensus 421 ~L~~ti~~~ 429 (1092)
T 2y3a_A 421 RLCFAVYAV 429 (1092)
T ss_dssp EEEEECCCC
T ss_pred EEEEEEEEe
Confidence 889999874
No 57
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=92.43 E-value=0.46 Score=50.43 Aligned_cols=78 Identities=17% Similarity=0.196 Sum_probs=48.3
Q ss_pred eEEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeecCCCCCCCeeceEEEEEeccCccCCCce
Q 040877 4 STLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTDREGGGNPEWNHMMKFDIKAFVDNCNHL 83 (281)
Q Consensus 4 g~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~~~gg~NPvWNEtf~F~V~~~~~~~~~~ 83 (281)
+.+.|+|+.+..+... .....+.||.+.|..+.. .+-+.+|.-. .-+.++.|||.++|++.=..+.. .+
T Consensus 218 ~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~--------~l~~~~t~~~-~~~~~~~Wne~l~f~i~i~dLPr-~a 286 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQ--------VLCQRRTSPK-PFTEEVLWNVWLEFSIKIKDLPK-GA 286 (961)
T ss_dssp SEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTE--------EEEEEECCCE-ECCSEEEEEEEEEEEEEGGGCCT-TC
T ss_pred CceEEEEeeccccccc-CCCCceEEEEEEEEECCE--------Ecccceeecc-ccCCCcccceeEEeccccccCCc-cc
Confidence 5688999988642211 113468999998875521 1222334332 24568999999999887322322 26
Q ss_pred EEEEEEEEC
Q 040877 84 FIAFDLYSE 92 (281)
Q Consensus 84 ~L~~eV~d~ 92 (281)
.|.|.||+.
T Consensus 287 ~L~~ti~~~ 295 (961)
T 1e7u_A 287 LLNLQIYCG 295 (961)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEec
Confidence 888888864
No 58
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=85.38 E-value=2.6 Score=35.46 Aligned_cols=100 Identities=13% Similarity=0.018 Sum_probs=62.5
Q ss_pred EEEEEEEeecCCCCCCCCCCCCeEEEEEEecCccchhhhhccccceEEeeec-CCCCCCCeeceEEEEEeccCccCCCce
Q 040877 5 TLELKVNSCSDLKAFNLFNRLSVYSVVSIINGELKKKEQRQTCLQRQKTPTD-REGGGNPEWNHMMKFDIKAFVDNCNHL 83 (281)
Q Consensus 5 ~LeVtViSAkdLk~~~~~gk~DPYVvV~i~g~~~~~~~~~~~~~~k~KTkV~-~~gg~NPvWNEtf~F~V~~~~~~~~~~ 83 (281)
.|.|.|-+- +|++... -.|||+.|++.... +.-....+.|.+. +.++..=.||.+.++...-..+.. .+
T Consensus 15 ~l~v~Ie~i-glkda~~--~~~P~~tVSV~D~~------G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~-G~ 84 (152)
T 2qzq_A 15 LLTLTIEKI-GLKDAGQ--CIDPYITVSVKDLN------GIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPK-GA 84 (152)
T ss_dssp EEEEEEEEE-ECTTGGG--CEEEEEEEEEECTT------SCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCT-TC
T ss_pred EEEEEEEEE-EeCCHHH--ccCCeEEEEEEcCC------CCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCC-Cc
Confidence 366655544 8887542 26999999997431 1112356778776 333445567766666544222223 36
Q ss_pred EEEEEEEECCccCCCe--eeEEEEEechhhhccc
Q 040877 84 FIAFDLYSEGVIYGYR--SIGKVHVPLKDLIDEF 115 (281)
Q Consensus 84 ~L~~eV~d~~~~~gDk--~IG~v~VpL~dL~~g~ 115 (281)
.|.||++++..- +.+ ..+++.+.+.++..|.
T Consensus 85 aivfElkH~k~k-kkk~S~kCw~f~~~d~i~~g~ 117 (152)
T 2qzq_A 85 AIFFEFKHYKPK-KRFTSTKCFAFMEMDEIKPGP 117 (152)
T ss_dssp EEEEEEEEEETT-TTEEEEEEEEEEEGGGCCSEE
T ss_pred EEEEEEEEeccc-ceeeeeeeEEEEEhhhcccCc
Confidence 899999987642 333 5789999999887653
No 59
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=24.31 E-value=16 Score=33.24 Aligned_cols=54 Identities=22% Similarity=0.212 Sum_probs=0.0
Q ss_pred ccCCcccccCCCCCccCCCCCcccCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCc
Q 040877 172 NYPCIEVDDLSSPGICYPPLDYVYSPLPGFYSPPPNYQYEATRGYGTTLPPLSPVQV 228 (281)
Q Consensus 172 ~yp~~~~~~~~~~~~~yp~~~~~~~p~~~~~~~~~~~~~p~~~~y~~~pp~~~p~~~ 228 (281)
+||+.... .++.-||+...-..+.|..+.|+++..||.+.+++..||+.+++++
T Consensus 392 ~~~~~~~~---~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (448)
T 2z73_A 392 GYAPPPQG---YPPQGYPPQGYPPQGYPPQGYPPPPQGAPPQGAPPAAPPQGVDNQA 445 (448)
T ss_dssp ---------------------------------------------------------
T ss_pred CCCCCcCC---CCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Done!