BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040879
MASLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNN
EGTSRIYYDSERVSPGGPDPKHH

High Scoring Gene Products

Symbol, full name Information P value
CLE4
AT2G31081
protein from Arabidopsis thaliana 3.9e-12
CLE3
AT1G06225
protein from Arabidopsis thaliana 8.4e-10
CLE1
AT1G73165
protein from Arabidopsis thaliana 1.0e-06
CLE6
AT2G31085
protein from Arabidopsis thaliana 0.00013
CLE2
AT4G18510
protein from Arabidopsis thaliana 0.00035
CLE5
AT2G31083
protein from Arabidopsis thaliana 0.00045

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040879
        (83 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504955980 - symbol:CLE4 "AT2G31081" species:37...   163  3.9e-12   1
TAIR|locus:505006104 - symbol:CLE3 "AT1G06225" species:37...   141  8.4e-10   1
TAIR|locus:504956162 - symbol:CLE1 "AT1G73165" species:37...   112  1.0e-06   1
TAIR|locus:505006281 - symbol:CLE6 "AT2G31085" species:37...    92  0.00013   1
TAIR|locus:2124588 - symbol:CLE2 "AT4G18510" species:3702...    88  0.00035   1
TAIR|locus:504955982 - symbol:CLE5 "AT2G31083" species:37...    87  0.00045   1


>TAIR|locus:504955980 [details] [associations]
            symbol:CLE4 "AT2G31081" species:3702 "Arabidopsis
            thaliana" [GO:0005102 "receptor binding" evidence=ISS] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0007165 "signal
            transduction" evidence=ISS] [GO:0048046 "apoplast" evidence=RCA]
            [GO:0010075 "regulation of meristem growth" evidence=IMP]
            GO:GO:0005615 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0010075
            GO:GO:0045168 HOGENOM:HOG000090934 ProtClustDB:CLSN2687705
            EMBL:AC005311 EMBL:BT012587 EMBL:BT015094 IPI:IPI00519706
            RefSeq:NP_850157.1 UniGene:At.45710 EnsemblPlants:AT2G31081.1
            GeneID:817661 KEGG:ath:AT2G31081 GeneFarm:100 TAIR:At2g31081
            eggNOG:NOG322709 InParanoid:Q8S8N0 OMA:NIRKIMR PhylomeDB:Q8S8N0
            Genevestigator:Q8S8N0 Uniprot:Q8S8N0
        Length = 80

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 39/85 (45%), Positives = 52/85 (61%)

Query:     1 MASLKFWACLALLLMTISRFESRPL-ENNYPERKNNVVRKIWQEFLLEKTREELEVKLGN 59
             MAS K W CL LLL+  S  + RPL     P    N+ RKI +E L  K  EEL+V+  +
Sbjct:     1 MASFKLWVCLILLLLEFSVHQCRPLVAEESPSDSGNI-RKIMRELL--KRSEELKVR--S 55

Query:    60 NEGTSRI-YYDSERVSPGGPDPKHH 83
              +G + +   DS+R+SPGGPDP+HH
Sbjct:    56 KDGQTVLGTLDSKRLSPGGPDPRHH 80


>TAIR|locus:505006104 [details] [associations]
            symbol:CLE3 "AT1G06225" species:3702 "Arabidopsis
            thaliana" [GO:0005102 "receptor binding" evidence=ISS] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0007165 "signal
            transduction" evidence=ISS] [GO:0048046 "apoplast" evidence=RCA]
            GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005615
            GO:GO:0048046 EMBL:AC025290 GO:GO:0033612 GO:GO:0045168
            HOGENOM:HOG000090934 EMBL:DQ446232 EMBL:DQ652827 IPI:IPI00545167
            RefSeq:NP_563763.1 UniGene:At.51501 EnsemblPlants:AT1G06225.1
            GeneID:837132 KEGG:ath:AT1G06225 GeneFarm:99 TAIR:At1g06225
            eggNOG:NOG317637 InParanoid:Q3EDH8 OMA:LKLWVCL PhylomeDB:Q3EDH8
            ProtClustDB:CLSN2687705 Genevestigator:Q3EDH8 Uniprot:Q3EDH8
        Length = 83

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 39/88 (44%), Positives = 52/88 (59%)

Query:     1 MASLKFWACLALLLMT--ISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLG 58
             MASLK W CL LLL+    S  E RPL        ++ ++KI +E L E+ +E   +K G
Sbjct:     1 MASLKLWVCLVLLLVLELTSVHECRPLVAEERFSGSSRLKKIRRE-LFERLKE---MK-G 55

Query:    59 NNEGTSRIY---YDSERVSPGGPDPKHH 83
              +EG   I     DS+R+SPGGPDP+HH
Sbjct:    56 RSEGEETILGNTLDSKRLSPGGPDPRHH 83


>TAIR|locus:504956162 [details] [associations]
            symbol:CLE1 "AT1G73165" species:3702 "Arabidopsis
            thaliana" [GO:0005102 "receptor binding" evidence=ISS] [GO:0007165
            "signal transduction" evidence=ISS] [GO:0048046 "apoplast"
            evidence=RCA] [GO:0033612 "receptor serine/threonine kinase
            binding" evidence=IPI] GO:GO:0007275 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005615 GO:GO:0048046 EMBL:AC008017
            GO:GO:0045168 IPI:IPI00536286 RefSeq:NP_683490.1 UniGene:At.66133
            STRING:Q3ECD6 EnsemblPlants:AT1G73165.1 GeneID:843648
            KEGG:ath:AT1G73165 GeneFarm:98 TAIR:At1g73165 eggNOG:NOG243345
            HOGENOM:HOG000090934 InParanoid:Q3ECD6 PhylomeDB:Q3ECD6
            Genevestigator:Q3ECD6 Uniprot:Q3ECD6
        Length = 74

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 34/84 (40%), Positives = 49/84 (58%)

Query:     1 MASLKFWACLALLLMTISRFE-SRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGN 59
             MA+LKF  CL L+ +++SR   SRP+  N    K   +  I  E +L+ + E+L ++ G 
Sbjct:     1 MANLKFLLCLFLICVSLSRSSASRPMFPNADGIKRGRMM-IEAEEVLKASMEKL-MERGF 58

Query:    60 NEGTSRIYYDSERVSPGGPDPKHH 83
             NE        S R+SPGGPDP+HH
Sbjct:    59 NE--------SMRLSPGGPDPRHH 74


>TAIR|locus:505006281 [details] [associations]
            symbol:CLE6 "AT2G31085" species:3702 "Arabidopsis
            thaliana" [GO:0005102 "receptor binding" evidence=ISS] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0007165 "signal
            transduction" evidence=ISS] [GO:0048046 "apoplast" evidence=RCA]
            GO:GO:0007275 GO:GO:0005615 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0045168 EMBL:AC005311 HOGENOM:HOG000090936 EMBL:AY086725
            IPI:IPI00542241 RefSeq:NP_565713.1 UniGene:At.38264
            EnsemblPlants:AT2G31085.1 GeneID:817664 KEGG:ath:AT2G31085
            GeneFarm:101 TAIR:At2g31085 eggNOG:NOG307368 InParanoid:Q8S8N3
            OMA:KGNSERR PhylomeDB:Q8S8N3 ProtClustDB:CLSN2688590
            Genevestigator:Q8S8N3 Uniprot:Q8S8N3
        Length = 81

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 19/34 (55%), Positives = 22/34 (64%)

Query:    52 ELEVKLGNNEGTS--RIYYDSERVSPGGPDPKHH 83
             EL + L   +G    R   DSERVSPGGPDP+HH
Sbjct:    48 ELGIDLSKFKGQDERRFLVDSERVSPGGPDPQHH 81


>TAIR|locus:2124588 [details] [associations]
            symbol:CLE2 "AT4G18510" species:3702 "Arabidopsis
            thaliana" [GO:0005102 "receptor binding" evidence=ISS] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0007165 "signal
            transduction" evidence=ISS] [GO:0048046 "apoplast"
            evidence=IDA;RCA] [GO:0033612 "receptor serine/threonine kinase
            binding" evidence=IPI] [GO:0045168 "cell-cell signaling involved in
            cell fate commitment" evidence=IDA] GO:GO:0007275 GO:GO:0005615
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0048046 EMBL:AL161548
            EMBL:AL021710 GO:GO:0045168 EMBL:BT010812 EMBL:BT011289
            IPI:IPI00544180 PIR:T04547 RefSeq:NP_193586.1 UniGene:At.32895
            IntAct:O49519 STRING:O49519 EnsemblPlants:AT4G18510.1 GeneID:827583
            KEGG:ath:AT4G18510 GeneFarm:97 TAIR:At4g18510 eggNOG:NOG290688
            HOGENOM:HOG000114726 OMA:PTVEDDQ ProtClustDB:CLSN2915848
            Genevestigator:O49519 Uniprot:O49519
        Length = 75

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 32/85 (37%), Positives = 40/85 (47%)

Query:     1 MASLKFWACLALLLMTIS-RFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEV-KLG 58
             MA L F  C  L L+  S    SRPLE     R    VR +     +E T   +E  +  
Sbjct:     1 MAKLSFTFCFLLFLLLSSIAAGSRPLEG---ARVGVKVRGLSPS--IEATSPTVEDDQAA 55

Query:    59 NNEGTSRIYYDSERVSPGGPDPKHH 83
              + G S      ER+SPGGPDP+HH
Sbjct:    56 GSHGKS-----PERLSPGGPDPQHH 75


>TAIR|locus:504955982 [details] [associations]
            symbol:CLE5 "AT2G31083" species:3702 "Arabidopsis
            thaliana" [GO:0005102 "receptor binding" evidence=ISS] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0007165 "signal
            transduction" evidence=ISS] [GO:0048046 "apoplast" evidence=RCA]
            [GO:0033612 "receptor serine/threonine kinase binding"
            evidence=IPI] GO:GO:0007275 GO:GO:0005615 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0045168 EMBL:AC005311 EMBL:AY464584
            IPI:IPI00541869 RefSeq:NP_850159.2 UniGene:At.49363
            EnsemblPlants:AT2G31083.1 GeneID:817663 KEGG:ath:AT2G31083
            GeneFarm:103 TAIR:At2g31083 eggNOG:NOG267845 HOGENOM:HOG000090936
            InParanoid:Q8S8N2 OMA:GHNERRF PhylomeDB:Q8S8N2
            Genevestigator:Q8S8N2 Uniprot:Q8S8N2
        Length = 81

 Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query:    43 EFLLEKTREELEVKLGNNEGTSRIYYDSERVSPGGPDPKHH 83
             + LL +   +L    G+NE   R    S+RVSPGGPDP+HH
Sbjct:    43 QVLLHELGFDLSKFKGHNE--RRFLVSSDRVSPGGPDPQHH 81


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.134   0.407    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       83        83   0.00091  102 3  11 22  0.47    29
                                                     29  0.44    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  545 (58 KB)
  Total size of DFA:  114 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.36u 0.26s 11.62t   Elapsed:  00:00:01
  Total cpu time:  11.36u 0.26s 11.62t   Elapsed:  00:00:01
  Start:  Mon May 20 21:34:22 2013   End:  Mon May 20 21:34:23 2013

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