BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040879
(83 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S8N0|CLE4_ARATH CLAVATA3/ESR (CLE)-related protein 4 OS=Arabidopsis thaliana
GN=CLE4 PE=2 SV=1
Length = 80
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 1 MASLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNN 60
MAS K W CL LLL+ S + RPL + +RKI +E L K EEL+V+ +
Sbjct: 1 MASFKLWVCLILLLLEFSVHQCRPLVAEESPSDSGNIRKIMRELL--KRSEELKVRSKDG 58
Query: 61 EGTSRIYYDSERVSPGGPDPKHH 83
+ T DS+R+SPGGPDP+HH
Sbjct: 59 Q-TVLGTLDSKRLSPGGPDPRHH 80
>sp|Q3ECD6|CLE1_ARATH CLAVATA3/ESR (CLE)-related protein 1 OS=Arabidopsis thaliana
GN=CLE1 PE=1 SV=1
Length = 74
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 1 MASLKFWACLALLLMTISRFE-SRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGN 59
MA+LKF CL L+ +++SR SRP+ N K + I E +L+ + E+L
Sbjct: 1 MANLKFLLCLFLICVSLSRSSASRPMFPNADGIKRGRM-MIEAEEVLKASMEKL------ 53
Query: 60 NEGTSRIYYDSERVSPGGPDPKHH 83
R + +S R+SPGGPDP+HH
Sbjct: 54 ---MERGFNESMRLSPGGPDPRHH 74
>sp|Q8S8N3|CLE6_ARATH CLAVATA3/ESR (CLE)-related protein 6 OS=Arabidopsis thaliana
GN=CLE6 PE=2 SV=1
Length = 81
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 1 MASLKFWACLALLLMT----ISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVK 56
MA+L L +LL+ I ++R L P ++ ++ EL +
Sbjct: 1 MANLILKQSLIILLIIYSTPILSSQARILRTYRPTTMGDMDSQVL--------LRELGID 52
Query: 57 LGNNEGTS--RIYYDSERVSPGGPDPKHH 83
L +G R DSERVSPGGPDP+HH
Sbjct: 53 LSKFKGQDERRFLVDSERVSPGGPDPQHH 81
>sp|Q3EDH8|CLE3_ARATH CLAVATA3/ESR (CLE)-related protein 3 OS=Arabidopsis thaliana
GN=CLE3 PE=2 SV=1
Length = 83
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 21 ESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNNEGTSRIY---YDSERVSPGG 77
E RPL ++ ++KI +E E L+ G +EG I DS+R+SPGG
Sbjct: 23 ECRPLVAEERFSGSSRLKKIRRELF-----ERLKEMKGRSEGEETILGNTLDSKRLSPGG 77
Query: 78 PDPKHH 83
PDP+HH
Sbjct: 78 PDPRHH 83
>sp|Q8S8N2|CLE5_ARATH CLAVATA3/ESR (CLE)-related protein 5 OS=Arabidopsis thaliana
GN=CLE5 PE=2 SV=2
Length = 81
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 43 EFLLEKTREELEVKLGNNEGTSRIYYDSERVSPGGPDPKHH 83
+ LL + +L G+NE R S+RVSPGGPDP+HH
Sbjct: 43 QVLLHELGFDLSKFKGHNE--RRFLVSSDRVSPGGPDPQHH 81
>sp|O49519|CLE2_ARATH CLAVATA3/ESR (CLE)-related protein 2 OS=Arabidopsis thaliana
GN=CLE2 PE=1 SV=1
Length = 75
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Query: 22 SRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNNEGTSRIYYDSERVSPGGPDPK 81
SRPLE R VR + +E T +E +++ ER+SPGGPDP+
Sbjct: 23 SRPLEG---ARVGVKVRGLSPS--IEATSPTVE----DDQAAGSHGKSPERLSPGGPDPQ 73
Query: 82 HH 83
HH
Sbjct: 74 HH 75
>sp|Q5JVX7|CA141_HUMAN Uncharacterized protein C1orf141 OS=Homo sapiens GN=C1orf141 PE=2
SV=1
Length = 400
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 10/50 (20%)
Query: 12 LLLMTISRFESRPLENN--YPERKNNVVRKIWQEFLLEKTREELEVKLGN 59
+LL+T +RF S PLEN YP ++ N F+LE+ E L+ +GN
Sbjct: 219 MLLLTKNRFSSHPLENENIYPHKRTN--------FILERNCEILKSIIGN 260
>sp|Q8S8N1|CLE7_ARATH CLAVATA3/ESR (CLE)-related protein 7 OS=Arabidopsis thaliana
GN=CLE7 PE=2 SV=1
Length = 86
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 1 MASLKFWACLALLLMTISRFESRPLENNYPER---KNNVVRKI-WQEFLLEKTREELEVK 56
MAS + L + + E R L N + N++++++ + L++ EL V+
Sbjct: 1 MASKALLLFVMLTFLLVIEMEGRILRVNSKTKDGESNDLLKRLGYNVSELKRIGRELSVQ 60
Query: 57 LGNNEGTSRIYYDSERVSPGGPDPKHH 83
NE +R SPGGPDP+HH
Sbjct: 61 ---NE--------VDRFSPGGPDPQHH 76
>sp|Q3ECU1|CLE11_ARATH CLAVATA3/ESR (CLE)-related protein 11 OS=Arabidopsis thaliana
GN=CLE11 PE=2 SV=1
Length = 99
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 67 YYDSERVSPGGPDPKHH 83
Y D ERV P GP+P HH
Sbjct: 83 YNDEERVVPSGPNPLHH 99
>sp|Q9BN21|CLE1_HETGL CLAVATA3/ESR (CLE)-related protein 1 OS=Heterodera glycines GN=CLE1
PE=1 SV=1
Length = 139
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 69 DSERVSPGGPDPKHH 83
D +R+SP GPDP HH
Sbjct: 125 DPKRLSPSGPDPHHH 139
>sp|Q86RQ1|CLE2_HETGL CLAVATA3/ESR (CLE)-related protein 2 OS=Heterodera glycines GN=CLE2
PE=1 SV=1
Length = 138
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 11/41 (26%)
Query: 46 LEKTRE---ELEVKLGNNEGTSRIYYDSERVSPGGPDPKHH 83
LEK R EL K+ NE S+R+SP GPDP HH
Sbjct: 106 LEKMRAHLRELAEKMPVNE--------SKRLSPSGPDPHHH 138
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,661,366
Number of Sequences: 539616
Number of extensions: 1266034
Number of successful extensions: 3362
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3345
Number of HSP's gapped (non-prelim): 19
length of query: 83
length of database: 191,569,459
effective HSP length: 54
effective length of query: 29
effective length of database: 162,430,195
effective search space: 4710475655
effective search space used: 4710475655
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)