Query 040888
Match_columns 495
No_of_seqs 605 out of 4129
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 12:48:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040888.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040888hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 7.9E-36 1.7E-40 338.1 26.5 349 69-495 404-775 (968)
2 PLN00113 leucine-rich repeat r 99.9 2.7E-26 6E-31 260.3 19.1 206 25-233 26-260 (968)
3 KOG1187 Serine/threonine prote 99.8 7.5E-21 1.6E-25 189.8 11.9 103 391-495 61-164 (361)
4 PLN03150 hypothetical protein; 99.7 1.3E-17 2.8E-22 178.6 14.4 151 23-199 367-527 (623)
5 KOG0617 Ras suppressor protein 99.7 1.1E-18 2.3E-23 148.8 -5.3 161 68-233 32-196 (264)
6 KOG0595 Serine/threonine-prote 99.7 2.2E-16 4.8E-21 151.9 9.4 92 404-495 9-101 (429)
7 KOG1094 Discoidin domain recep 99.6 1.6E-15 3.5E-20 151.2 9.9 90 404-494 537-626 (807)
8 KOG4194 Membrane glycoprotein 99.6 6.8E-17 1.5E-21 161.0 0.0 170 63-232 263-439 (873)
9 KOG0444 Cytoskeletal regulator 99.6 6.3E-16 1.4E-20 155.2 0.4 160 69-233 103-291 (1255)
10 KOG1026 Nerve growth factor re 99.5 2E-15 4.2E-20 157.7 4.0 90 405-495 486-581 (774)
11 KOG0196 Tyrosine kinase, EPH ( 99.5 1.2E-14 2.6E-19 149.6 8.4 88 407-495 631-722 (996)
12 PLN03150 hypothetical protein; 99.5 5.5E-14 1.2E-18 150.7 13.5 87 117-203 420-506 (623)
13 KOG0617 Ras suppressor protein 99.5 9.4E-16 2E-20 130.9 -2.6 143 88-234 28-174 (264)
14 KOG0197 Tyrosine kinases [Sign 99.5 2E-14 4.2E-19 143.3 6.1 86 407-495 208-293 (468)
15 KOG0192 Tyrosine kinase specif 99.5 5.8E-14 1.3E-18 139.6 9.1 86 410-495 46-132 (362)
16 KOG4194 Membrane glycoprotein 99.5 2.7E-14 5.9E-19 142.7 5.7 167 55-222 48-234 (873)
17 PRK15370 E3 ubiquitin-protein 99.5 4.8E-13 1E-17 144.5 15.5 171 17-201 52-297 (754)
18 KOG4237 Extracellular matrix p 99.4 2E-14 4.3E-19 137.7 1.1 190 53-242 37-360 (498)
19 KOG0194 Protein tyrosine kinas 99.4 1.9E-13 4E-18 138.3 7.7 97 399-495 151-253 (474)
20 KOG0615 Serine/threonine prote 99.4 4.8E-13 1E-17 129.0 8.7 90 405-494 172-267 (475)
21 KOG0600 Cdc2-related protein k 99.4 4E-13 8.8E-18 132.6 7.2 89 405-494 117-208 (560)
22 PRK15387 E3 ubiquitin-protein 99.4 5.8E-13 1.3E-17 143.2 9.0 109 115-232 342-468 (788)
23 KOG0444 Cytoskeletal regulator 99.4 2.4E-14 5.3E-19 143.9 -1.5 150 69-222 32-186 (1255)
24 KOG0580 Serine/threonine prote 99.4 2.1E-13 4.6E-18 122.7 3.4 92 404-495 21-114 (281)
25 PRK15370 E3 ubiquitin-protein 99.4 1.4E-12 3E-17 140.9 9.5 147 70-229 221-386 (754)
26 KOG4278 Protein tyrosine kinas 99.3 3.9E-13 8.4E-18 135.2 3.8 95 398-495 260-355 (1157)
27 KOG0659 Cdk activating kinase 99.3 1.8E-12 3.9E-17 118.4 6.5 88 406-494 3-91 (318)
28 KOG0575 Polo-like serine/threo 99.3 5.9E-12 1.3E-16 127.3 9.6 91 405-495 18-110 (592)
29 KOG1095 Protein tyrosine kinas 99.3 2.4E-12 5.3E-17 139.6 7.3 89 406-495 693-787 (1025)
30 KOG0581 Mitogen-activated prot 99.3 5.2E-12 1.1E-16 120.8 8.7 85 409-494 83-169 (364)
31 PRK15387 E3 ubiquitin-protein 99.3 1.9E-11 4E-16 131.7 13.3 54 69-128 222-275 (788)
32 KOG0593 Predicted protein kina 99.3 1.8E-12 3.9E-17 120.4 3.2 87 406-492 3-90 (396)
33 KOG0598 Ribosomal protein S6 k 99.3 9.5E-12 2.1E-16 119.0 7.0 92 404-495 24-117 (357)
34 cd05105 PTKc_PDGFR_alpha Catal 99.2 1.8E-11 3.8E-16 125.1 9.4 91 404-495 36-133 (400)
35 KOG0472 Leucine-rich repeat pr 99.2 1.2E-13 2.5E-18 132.7 -6.2 158 70-233 138-298 (565)
36 KOG0597 Serine-threonine prote 99.2 4.1E-12 8.8E-17 126.9 4.2 89 405-494 2-91 (808)
37 KOG0532 Leucine-rich repeat (L 99.2 1.7E-13 3.7E-18 136.8 -5.8 133 85-222 113-247 (722)
38 KOG0605 NDR and related serine 99.2 2.6E-11 5.6E-16 120.9 8.9 92 403-494 139-232 (550)
39 KOG0472 Leucine-rich repeat pr 99.2 6.5E-13 1.4E-17 127.6 -2.4 148 71-222 390-541 (565)
40 cd05104 PTKc_Kit Catalytic dom 99.2 1.6E-11 3.6E-16 124.5 7.6 91 404-495 34-131 (375)
41 cd05064 PTKc_EphR_A10 Catalyti 99.2 2.9E-11 6.3E-16 116.6 8.7 89 405-494 5-97 (266)
42 KOG0663 Protein kinase PITSLRE 99.2 9.4E-12 2E-16 117.2 4.9 90 404-494 75-167 (419)
43 cd05096 PTKc_DDR1 Catalytic do 99.2 4.6E-11 1E-15 117.5 9.9 89 405-494 5-110 (304)
44 KOG0591 NIMA (never in mitosis 99.2 6.5E-13 1.4E-17 122.1 -3.2 90 405-494 19-111 (375)
45 cd05626 STKc_LATS2 Catalytic d 99.2 4.6E-11 1E-15 121.6 9.8 89 406-494 2-92 (381)
46 cd00116 LRR_RI Leucine-rich re 99.2 5E-12 1.1E-16 125.2 2.3 113 88-200 76-206 (319)
47 cd05629 STKc_NDR_like_fungal C 99.2 5.8E-11 1.3E-15 120.7 9.8 90 405-494 1-92 (377)
48 PHA02988 hypothetical protein; 99.2 1.2E-10 2.5E-15 113.6 11.2 96 394-495 14-114 (283)
49 cd05114 PTKc_Tec_Rlk Catalytic 99.2 6.4E-11 1.4E-15 113.3 9.2 88 405-495 4-91 (256)
50 cd06624 STKc_ASK Catalytic dom 99.2 7.2E-11 1.6E-15 113.8 9.6 93 400-494 3-96 (268)
51 cd05599 STKc_NDR_like Catalyti 99.2 5.3E-11 1.2E-15 120.3 8.9 90 405-494 1-92 (364)
52 cd06650 PKc_MEK1 Catalytic dom 99.2 9.6E-11 2.1E-15 117.0 10.4 89 405-494 5-94 (333)
53 cd00116 LRR_RI Leucine-rich re 99.2 6.5E-12 1.4E-16 124.4 1.9 154 69-222 81-263 (319)
54 cd05107 PTKc_PDGFR_beta Cataly 99.2 4.2E-11 9.1E-16 122.3 7.7 91 404-495 36-133 (401)
55 KOG0193 Serine/threonine prote 99.2 2.8E-11 6.1E-16 122.1 6.1 97 396-495 383-479 (678)
56 cd05600 STKc_Sid2p_Dbf2p Catal 99.2 9.1E-11 2E-15 117.1 9.7 89 406-494 2-92 (333)
57 cd06649 PKc_MEK2 Catalytic dom 99.2 1.2E-10 2.6E-15 116.1 10.5 89 405-494 5-94 (331)
58 PLN03210 Resistant to P. syrin 99.2 2.2E-10 4.8E-15 131.7 13.7 35 164-198 779-813 (1153)
59 cd05102 PTKc_VEGFR3 Catalytic 99.2 3.9E-11 8.4E-16 120.0 6.6 91 404-495 6-104 (338)
60 PTZ00263 protein kinase A cata 99.2 9.2E-11 2E-15 116.9 9.0 90 405-494 18-109 (329)
61 cd05625 STKc_LATS1 Catalytic d 99.2 1.2E-10 2.6E-15 118.6 10.0 89 406-494 2-92 (382)
62 cd05598 STKc_LATS Catalytic do 99.1 1.4E-10 3.1E-15 117.7 10.1 89 406-494 2-92 (376)
63 cd05612 STKc_PRKX_like Catalyt 99.1 6.3E-11 1.4E-15 115.9 7.2 89 406-494 2-92 (291)
64 PF07714 Pkinase_Tyr: Protein 99.1 5.3E-11 1.1E-15 114.4 6.3 85 410-495 4-93 (259)
65 KOG0611 Predicted serine/threo 99.1 2.6E-11 5.7E-16 116.6 4.0 89 406-494 54-144 (668)
66 KOG0586 Serine/threonine prote 99.1 1.5E-10 3.2E-15 117.4 9.3 95 401-495 52-147 (596)
67 cd06615 PKc_MEK Catalytic doma 99.1 2.3E-10 4.9E-15 112.9 10.4 89 406-495 2-91 (308)
68 cd05628 STKc_NDR1 Catalytic do 99.1 1.7E-10 3.7E-15 116.6 9.7 90 405-494 1-92 (363)
69 KOG0618 Serine/threonine phosp 99.1 6.5E-12 1.4E-16 132.1 -0.8 123 95-220 361-487 (1081)
70 cd05621 STKc_ROCK2 Catalytic d 99.1 1.4E-10 3.1E-15 117.4 9.0 95 400-494 38-134 (370)
71 KOG1025 Epidermal growth facto 99.1 1.8E-11 3.8E-16 127.1 2.3 85 409-495 700-789 (1177)
72 KOG0618 Serine/threonine phosp 99.1 4.9E-12 1.1E-16 133.0 -1.7 153 68-223 263-466 (1081)
73 PTZ00426 cAMP-dependent protei 99.1 1.6E-10 3.5E-15 115.6 9.2 90 405-494 30-122 (340)
74 cd05596 STKc_ROCK Catalytic do 99.1 1.1E-10 2.5E-15 118.2 8.1 92 403-494 41-134 (370)
75 cd05072 PTKc_Lyn Catalytic dom 99.1 1.6E-10 3.4E-15 110.9 8.7 87 405-494 6-92 (261)
76 cd08529 STKc_FA2-like Catalyti 99.1 2E-10 4.4E-15 109.6 9.4 90 406-495 1-91 (256)
77 cd05106 PTKc_CSF-1R Catalytic 99.1 9.6E-11 2.1E-15 118.9 7.4 91 404-495 37-134 (374)
78 cd05597 STKc_DMPK_like Catalyt 99.1 2.2E-10 4.7E-15 114.3 9.8 90 405-494 1-92 (331)
79 cd05624 STKc_MRCK_beta Catalyt 99.1 2.1E-10 4.5E-15 114.5 9.5 90 405-494 1-92 (331)
80 KOG0583 Serine/threonine prote 99.1 2.3E-10 5.1E-15 114.8 9.9 91 404-494 16-111 (370)
81 cd05631 STKc_GRK4 Catalytic do 99.1 2.4E-10 5.2E-15 111.4 9.7 88 407-494 2-91 (285)
82 PLN03210 Resistant to P. syrin 99.1 6.1E-10 1.3E-14 128.1 14.3 161 70-234 658-870 (1153)
83 cd05605 STKc_GRK4_like Catalyt 99.1 2.2E-10 4.8E-15 111.7 9.2 88 407-494 2-91 (285)
84 cd05033 PTKc_EphR Catalytic do 99.1 2.6E-10 5.7E-15 109.7 9.7 89 405-494 4-96 (266)
85 cd05148 PTKc_Srm_Brk Catalytic 99.1 1.1E-10 2.4E-15 111.9 6.7 91 403-495 4-94 (261)
86 KOG0582 Ste20-like serine/thre 99.1 2.3E-10 4.9E-15 111.8 8.7 89 405-494 26-115 (516)
87 cd05582 STKc_RSK_N N-terminal 99.1 2.8E-10 6.1E-15 112.8 9.6 84 411-494 2-89 (318)
88 cd06646 STKc_MAP4K5 Catalytic 99.1 4.7E-10 1E-14 108.0 10.7 88 405-494 9-97 (267)
89 cd06631 STKc_YSK4 Catalytic do 99.1 4.7E-10 1E-14 107.8 10.7 88 407-494 2-93 (265)
90 cd05068 PTKc_Frk_like Catalyti 99.1 2.5E-10 5.4E-15 109.6 8.7 88 404-494 5-92 (261)
91 cd05622 STKc_ROCK1 Catalytic d 99.1 2.3E-10 5.1E-15 115.9 8.9 98 397-494 35-134 (371)
92 KOG0610 Putative serine/threon 99.1 1.1E-10 2.4E-15 113.1 6.1 90 406-495 78-169 (459)
93 cd05601 STKc_CRIK Catalytic do 99.1 2.5E-10 5.5E-15 113.7 8.9 90 405-494 1-92 (330)
94 cd07848 STKc_CDKL5 Catalytic d 99.1 2.6E-10 5.6E-15 111.1 8.6 88 406-493 2-90 (287)
95 cd05573 STKc_ROCK_NDR_like Cat 99.1 1.9E-10 4.1E-15 115.5 7.8 90 405-494 1-92 (350)
96 cd05595 STKc_PKB_beta Catalyti 99.1 3.6E-10 7.9E-15 112.3 9.7 84 411-494 1-86 (323)
97 PLN00034 mitogen-activated pro 99.1 2.5E-10 5.4E-15 114.9 8.6 87 406-493 75-162 (353)
98 cd08224 STKc_Nek6_Nek7 Catalyt 99.1 5.2E-10 1.1E-14 107.5 10.4 90 405-494 2-93 (267)
99 cd08221 STKc_Nek9 Catalytic do 99.1 5.5E-10 1.2E-14 106.7 10.5 89 406-494 1-90 (256)
100 cd06620 PKc_MAPKK_Byr1_like Ca 99.1 3.1E-10 6.6E-15 110.5 8.9 88 406-494 6-94 (284)
101 cd05627 STKc_NDR2 Catalytic do 99.1 4E-10 8.6E-15 113.8 10.0 90 405-494 1-92 (360)
102 cd08227 PK_STRAD_alpha Pseudok 99.1 4.2E-10 9.1E-15 112.0 10.0 85 410-494 3-90 (327)
103 cd05571 STKc_PKB Catalytic dom 99.1 4E-10 8.7E-15 112.0 9.8 84 411-494 1-86 (323)
104 cd05034 PTKc_Src_like Catalyti 99.1 3.9E-10 8.4E-15 108.1 9.3 88 404-494 5-92 (261)
105 cd05085 PTKc_Fer Catalytic dom 99.1 4.2E-10 9.2E-15 107.1 9.5 83 411-494 1-83 (250)
106 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.1 3.3E-10 7.2E-15 109.3 8.9 83 411-494 1-86 (269)
107 cd05061 PTKc_InsR Catalytic do 99.1 2.4E-10 5.2E-15 111.5 7.9 91 403-494 4-100 (288)
108 KOG0662 Cyclin-dependent kinas 99.1 7E-11 1.5E-15 101.9 3.5 86 406-492 3-89 (292)
109 PRK13184 pknD serine/threonine 99.1 4.6E-10 9.9E-15 122.7 10.7 90 405-494 2-93 (932)
110 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.1 2.7E-10 5.9E-15 110.3 8.1 81 412-494 2-107 (274)
111 cd05066 PTKc_EphR_A Catalytic 99.1 3.7E-10 8.1E-15 108.8 8.8 89 405-494 4-96 (267)
112 KOG0032 Ca2+/calmodulin-depend 99.1 5.2E-10 1.1E-14 112.4 10.1 91 404-494 34-127 (382)
113 cd05113 PTKc_Btk_Bmx Catalytic 99.1 3.5E-10 7.6E-15 108.3 8.5 86 406-494 5-90 (256)
114 cd05062 PTKc_IGF-1R Catalytic 99.1 2.6E-10 5.6E-15 110.5 7.7 91 403-494 4-100 (277)
115 cd05623 STKc_MRCK_alpha Cataly 99.1 4.5E-10 9.7E-15 112.1 9.5 90 405-494 1-92 (332)
116 cd05585 STKc_YPK1_like Catalyt 99.1 4.4E-10 9.6E-15 111.1 9.2 82 413-494 1-84 (312)
117 cd05090 PTKc_Ror1 Catalytic do 99.1 4.6E-10 9.9E-15 109.1 9.1 89 405-494 5-98 (283)
118 cd05059 PTKc_Tec_like Catalyti 99.1 4.9E-10 1.1E-14 107.3 9.1 86 406-494 5-90 (256)
119 cd08228 STKc_Nek6 Catalytic do 99.1 8.3E-10 1.8E-14 106.2 10.7 90 405-494 2-93 (267)
120 KOG1259 Nischarin, modulator o 99.1 1.8E-11 3.9E-16 113.6 -0.8 132 88-225 279-415 (490)
121 KOG0616 cAMP-dependent protein 99.1 2.9E-10 6.2E-15 105.7 7.0 91 405-495 44-136 (355)
122 PF14580 LRR_9: Leucine-rich r 99.1 1.4E-10 3E-15 103.1 4.7 109 90-200 16-126 (175)
123 cd06641 STKc_MST3 Catalytic do 99.1 8.8E-10 1.9E-14 106.8 10.8 87 407-494 6-93 (277)
124 cd05593 STKc_PKB_gamma Catalyt 99.1 7E-10 1.5E-14 110.5 10.1 84 411-494 1-86 (328)
125 cd05084 PTKc_Fes Catalytic dom 99.1 5.7E-10 1.2E-14 106.4 9.1 83 411-494 1-84 (252)
126 cd05050 PTKc_Musk Catalytic do 99.0 4E-10 8.7E-15 109.8 8.1 90 404-494 4-99 (288)
127 cd06638 STKc_myosinIIIA Cataly 99.0 4.4E-10 9.6E-15 109.3 8.4 97 395-494 8-111 (286)
128 cd05049 PTKc_Trk Catalytic dom 99.0 3.8E-10 8.2E-15 109.4 7.8 89 405-494 5-99 (280)
129 cd08218 STKc_Nek1 Catalytic do 99.0 8E-10 1.7E-14 105.6 9.8 89 406-494 1-90 (256)
130 KOG4257 Focal adhesion tyrosin 99.0 2.1E-10 4.5E-15 116.0 5.7 88 406-495 390-482 (974)
131 cd05067 PTKc_Lck_Blk Catalytic 99.0 7.4E-10 1.6E-14 106.2 9.4 86 405-494 6-91 (260)
132 cd06632 STKc_MEKK1_plant Catal 99.0 9.2E-10 2E-14 105.1 10.0 88 407-494 2-93 (258)
133 KOG0658 Glycogen synthase kina 99.0 1.2E-10 2.7E-15 111.3 3.8 81 407-494 26-112 (364)
134 cd05103 PTKc_VEGFR2 Catalytic 99.0 3.7E-10 8E-15 113.2 7.5 90 405-495 7-104 (343)
135 cd05097 PTKc_DDR_like Catalyti 99.0 4.9E-10 1.1E-14 109.7 8.1 89 405-494 5-108 (295)
136 cd05584 STKc_p70S6K Catalytic 99.0 7.3E-10 1.6E-14 110.1 9.3 84 411-494 2-91 (323)
137 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.0 9E-10 2E-14 107.1 9.8 88 405-494 4-98 (284)
138 cd07871 STKc_PCTAIRE3 Catalyti 99.0 1E-09 2.2E-14 107.1 10.2 88 405-494 5-93 (288)
139 cd06619 PKc_MKK5 Catalytic dom 99.0 1.5E-09 3.2E-14 105.4 11.2 87 406-493 2-89 (279)
140 cd08220 STKc_Nek8 Catalytic do 99.0 1.1E-09 2.5E-14 104.4 10.1 89 406-494 1-90 (256)
141 cd06629 STKc_MAPKKK_Bck1_like 99.0 9.9E-10 2.1E-14 106.0 9.7 89 407-495 3-100 (272)
142 cd05039 PTKc_Csk_like Catalyti 99.0 9.8E-10 2.1E-14 105.0 9.5 86 405-494 6-91 (256)
143 cd08225 STKc_Nek5 Catalytic do 99.0 6.6E-10 1.4E-14 106.1 8.3 89 406-494 1-90 (257)
144 cd05608 STKc_GRK1 Catalytic do 99.0 9.5E-10 2E-14 106.9 9.2 82 413-494 1-84 (280)
145 cd05632 STKc_GRK5 Catalytic do 99.0 1.3E-09 2.8E-14 106.2 10.0 88 407-494 2-91 (285)
146 cd05588 STKc_aPKC Catalytic do 99.0 1.2E-09 2.5E-14 108.9 9.9 84 411-494 1-87 (329)
147 cd07869 STKc_PFTAIRE1 Catalyti 99.0 1.5E-09 3.2E-14 106.8 10.4 89 404-494 4-93 (303)
148 cd05035 PTKc_Axl_like Catalyti 99.0 1.1E-09 2.4E-14 105.6 9.4 88 407-494 1-98 (273)
149 cd05630 STKc_GRK6 Catalytic do 99.0 1.4E-09 3.1E-14 106.0 10.2 88 407-494 2-91 (285)
150 cd07847 STKc_CDKL1_4 Catalytic 99.0 1.4E-09 3.1E-14 105.6 10.2 89 406-494 2-91 (286)
151 cd05052 PTKc_Abl Catalytic dom 99.0 8E-10 1.7E-14 106.2 8.3 86 406-494 7-93 (263)
152 cd05112 PTKc_Itk Catalytic dom 99.0 1.2E-09 2.7E-14 104.3 9.6 86 406-494 5-90 (256)
153 cd05589 STKc_PKN Catalytic dom 99.0 1.1E-09 2.4E-14 108.8 9.5 88 407-494 1-93 (324)
154 cd05042 PTKc_Aatyk Catalytic d 99.0 1.2E-09 2.5E-14 105.4 9.3 82 412-494 2-86 (269)
155 cd05036 PTKc_ALK_LTK Catalytic 99.0 7.8E-10 1.7E-14 107.2 8.2 90 404-494 5-100 (277)
156 cd07861 STKc_CDK1_euk Catalyti 99.0 1.8E-09 3.9E-14 104.9 10.7 88 406-494 1-89 (285)
157 cd05594 STKc_PKB_alpha Catalyt 99.0 1.4E-09 2.9E-14 108.3 10.0 84 411-494 1-86 (325)
158 KOG0199 ACK and related non-re 99.0 1.9E-10 4E-15 117.8 3.8 85 409-495 114-202 (1039)
159 KOG0198 MEKK and related serin 99.0 8.1E-10 1.8E-14 107.0 8.1 87 406-494 18-107 (313)
160 cd06656 STKc_PAK3 Catalytic do 99.0 1.7E-09 3.6E-14 106.2 10.5 88 405-494 19-107 (297)
161 cd05063 PTKc_EphR_A2 Catalytic 99.0 1.1E-09 2.3E-14 105.6 9.0 89 405-494 5-97 (268)
162 cd06625 STKc_MEKK3_like Cataly 99.0 2.1E-09 4.5E-14 103.1 10.9 90 405-494 2-95 (263)
163 PF14580 LRR_9: Leucine-rich r 99.0 2.8E-10 6.1E-15 101.2 4.4 121 70-194 20-147 (175)
164 cd06639 STKc_myosinIIIB Cataly 99.0 1.2E-09 2.6E-14 106.7 9.3 97 395-494 12-115 (291)
165 cd05580 STKc_PKA Catalytic dom 99.0 1.3E-09 2.9E-14 106.3 9.6 89 406-494 2-92 (290)
166 cd05071 PTKc_Src Catalytic dom 99.0 1.1E-09 2.3E-14 105.4 8.8 86 405-494 6-91 (262)
167 cd06611 STKc_SLK_like Catalyti 99.0 9E-10 1.9E-14 106.9 8.3 88 405-494 5-93 (280)
168 PTZ00266 NIMA-related protein 99.0 9E-10 1.9E-14 121.0 9.1 93 402-494 10-105 (1021)
169 cd05108 PTKc_EGFR Catalytic do 99.0 9E-10 2E-14 109.0 8.4 89 405-495 7-100 (316)
170 cd06630 STKc_MEKK1 Catalytic d 99.0 1.2E-09 2.6E-14 105.1 9.0 89 406-494 1-94 (268)
171 cd07846 STKc_CDKL2_3 Catalytic 99.0 5.5E-10 1.2E-14 108.6 6.8 89 406-494 2-91 (286)
172 cd05055 PTKc_PDGFR Catalytic d 99.0 1.1E-09 2.3E-14 107.8 8.9 90 405-495 35-131 (302)
173 cd06640 STKc_MST4 Catalytic do 99.0 1.5E-09 3.3E-14 105.1 9.8 88 406-494 5-93 (277)
174 cd06610 STKc_OSR1_SPAK Catalyt 99.0 2.2E-09 4.8E-14 103.0 10.8 89 405-494 1-90 (267)
175 PTZ00267 NIMA-related protein 99.0 1.2E-09 2.7E-14 114.4 9.7 86 407-494 69-156 (478)
176 cd05045 PTKc_RET Catalytic dom 99.0 1.4E-09 2.9E-14 106.3 9.3 88 406-494 1-94 (290)
177 cd05065 PTKc_EphR_B Catalytic 99.0 9.9E-10 2.2E-14 105.9 8.2 88 406-494 5-96 (269)
178 cd06626 STKc_MEKK4 Catalytic d 99.0 2E-09 4.3E-14 103.3 10.2 89 407-495 2-91 (264)
179 cd05046 PTK_CCK4 Pseudokinase 99.0 1.2E-09 2.6E-14 105.6 8.7 90 405-495 5-100 (275)
180 cd05048 PTKc_Ror Catalytic Dom 99.0 1.2E-09 2.5E-14 106.2 8.7 89 405-494 5-99 (283)
181 cd05578 STKc_Yank1 Catalytic d 99.0 6.2E-10 1.4E-14 106.5 6.6 89 406-494 1-91 (258)
182 cd05073 PTKc_Hck Catalytic dom 99.0 1.4E-09 3.1E-14 104.3 9.1 86 405-494 6-91 (260)
183 cd05070 PTKc_Fyn_Yrk Catalytic 99.0 1.6E-09 3.4E-14 104.0 9.3 86 405-494 6-91 (260)
184 KOG0589 Serine/threonine prote 99.0 5.6E-10 1.2E-14 111.2 6.3 90 405-494 4-95 (426)
185 cd05095 PTKc_DDR2 Catalytic do 99.0 1.2E-09 2.6E-14 107.0 8.7 89 405-494 5-110 (296)
186 KOG0033 Ca2+/calmodulin-depend 99.0 1.6E-11 3.5E-16 110.9 -4.1 88 405-492 11-99 (355)
187 cd05088 PTKc_Tie2 Catalytic do 99.0 1.2E-09 2.7E-14 107.4 8.8 90 405-495 7-100 (303)
188 cd06654 STKc_PAK1 Catalytic do 99.0 2.5E-09 5.3E-14 104.9 10.8 88 405-494 20-108 (296)
189 cd06642 STKc_STK25-YSK1 Cataly 99.0 6.4E-10 1.4E-14 107.7 6.5 87 407-494 6-93 (277)
190 cd08219 STKc_Nek3 Catalytic do 99.0 2.8E-09 6E-14 101.9 10.7 88 406-494 1-89 (255)
191 cd05607 STKc_GRK7 Catalytic do 99.0 2E-09 4.3E-14 104.5 9.8 82 413-494 1-84 (277)
192 cd05618 STKc_aPKC_iota Catalyt 99.0 2E-09 4.4E-14 107.3 10.1 84 411-494 1-87 (329)
193 cd06622 PKc_MAPKK_PBS2_like Ca 99.0 9E-10 1.9E-14 107.2 7.5 88 406-494 2-90 (286)
194 cd06621 PKc_MAPKK_Pek1_like Ca 99.0 2.1E-09 4.6E-14 104.8 10.0 88 406-494 2-92 (287)
195 cd06623 PKc_MAPKK_plant_like C 99.0 2.6E-09 5.6E-14 102.4 10.4 88 406-494 2-90 (264)
196 cd05093 PTKc_TrkB Catalytic do 99.0 1.5E-09 3.2E-14 105.9 8.9 88 405-494 5-98 (288)
197 KOG0594 Protein kinase PCTAIRE 99.0 1.1E-09 2.3E-14 104.8 7.5 88 406-494 12-107 (323)
198 cd05609 STKc_MAST Catalytic do 99.0 2.1E-09 4.6E-14 105.8 10.0 89 406-494 2-92 (305)
199 KOG0532 Leucine-rich repeat (L 99.0 2.7E-11 6E-16 121.3 -3.4 144 69-219 121-270 (722)
200 cd07832 STKc_CCRK Catalytic do 99.0 2E-09 4.3E-14 104.6 9.7 87 407-494 2-89 (286)
201 cd07841 STKc_CDK7 Catalytic do 99.0 1.6E-09 3.5E-14 106.0 9.1 88 407-495 2-93 (298)
202 cd05086 PTKc_Aatyk2 Catalytic 99.0 1.6E-09 3.5E-14 104.5 8.8 83 412-495 2-87 (268)
203 cd05075 PTKc_Axl Catalytic dom 99.0 2.2E-09 4.7E-14 103.6 9.7 87 408-494 2-97 (272)
204 KOG3653 Transforming growth fa 99.0 2.5E-09 5.4E-14 105.3 10.0 82 408-495 213-300 (534)
205 cd06609 STKc_MST3_like Catalyt 99.0 2.5E-09 5.4E-14 103.4 10.1 89 406-495 2-91 (274)
206 cd08229 STKc_Nek7 Catalytic do 99.0 1.4E-09 2.9E-14 104.7 8.1 90 405-494 2-93 (267)
207 cd07872 STKc_PCTAIRE2 Catalyti 99.0 2.7E-09 5.7E-14 105.3 10.2 88 405-494 6-94 (309)
208 cd06652 STKc_MEKK2 Catalytic d 99.0 3.5E-09 7.6E-14 101.8 10.8 90 405-494 2-97 (265)
209 cd05619 STKc_nPKC_theta Cataly 99.0 2.4E-09 5.3E-14 106.0 9.9 84 411-494 1-87 (316)
210 KOG4717 Serine/threonine prote 99.0 6.8E-10 1.5E-14 110.1 5.7 88 407-494 20-108 (864)
211 cd06645 STKc_MAP4K3 Catalytic 99.0 1.8E-09 3.9E-14 103.9 8.7 88 405-494 9-97 (267)
212 KOG4236 Serine/threonine prote 99.0 1.5E-09 3.3E-14 107.9 8.0 83 410-493 569-652 (888)
213 cd05603 STKc_SGK2 Catalytic do 99.0 2.2E-09 4.8E-14 106.5 9.4 84 411-494 1-87 (321)
214 PF00069 Pkinase: Protein kina 99.0 1.3E-09 2.8E-14 104.2 7.5 87 408-494 2-89 (260)
215 cd06637 STKc_TNIK Catalytic do 99.0 2.1E-09 4.5E-14 103.7 8.9 90 402-494 3-100 (272)
216 KOG4250 TANK binding protein k 99.0 3.7E-10 8E-15 116.2 3.7 85 410-495 18-109 (732)
217 cd07860 STKc_CDK2_3 Catalytic 99.0 1.6E-09 3.4E-14 105.4 8.0 88 406-494 1-89 (284)
218 cd05116 PTKc_Syk Catalytic dom 99.0 2.4E-09 5.2E-14 102.5 9.2 82 412-494 2-86 (257)
219 cd05038 PTKc_Jak_rpt2 Catalyti 99.0 2.8E-09 6E-14 103.4 9.7 89 406-495 5-100 (284)
220 cd05590 STKc_nPKC_eta Catalyti 99.0 2.2E-09 4.7E-14 106.5 9.1 84 411-494 1-87 (320)
221 cd06647 STKc_PAK_I Catalytic d 99.0 2.5E-09 5.4E-14 104.7 9.4 88 405-494 19-107 (293)
222 cd05591 STKc_nPKC_epsilon Cata 99.0 2.6E-09 5.6E-14 106.0 9.6 84 411-494 1-87 (321)
223 cd07853 STKc_NLK Catalytic dom 99.0 1.9E-09 4.1E-14 109.3 8.8 88 406-494 1-94 (372)
224 PTZ00283 serine/threonine prot 98.9 1.6E-09 3.5E-14 113.9 8.5 94 401-494 28-130 (496)
225 cd05587 STKc_cPKC Catalytic do 98.9 2.7E-09 5.9E-14 106.0 9.7 89 406-494 1-92 (324)
226 cd05098 PTKc_FGFR1 Catalytic d 98.9 2.1E-09 4.6E-14 105.9 8.9 90 405-495 18-116 (307)
227 cd05041 PTKc_Fes_like Catalyti 98.9 2.7E-09 5.7E-14 101.7 9.2 83 411-494 1-83 (251)
228 cd05053 PTKc_FGFR Catalytic do 98.9 1.7E-09 3.6E-14 105.7 7.9 91 403-494 10-107 (293)
229 cd05051 PTKc_DDR Catalytic dom 98.9 2.4E-09 5.2E-14 104.7 9.0 90 404-494 4-110 (296)
230 cd07859 STKc_TDY_MAPK_plant Ca 98.9 2.6E-09 5.6E-14 106.6 9.4 87 407-494 2-94 (338)
231 cd05079 PTKc_Jak1_rpt2 Catalyt 98.9 3.1E-09 6.7E-14 103.4 9.5 87 407-494 6-99 (284)
232 cd07844 STKc_PCTAIRE_like Cata 98.9 3.4E-09 7.3E-14 103.4 9.7 88 405-494 5-93 (291)
233 cd05069 PTKc_Yes Catalytic dom 98.9 3E-09 6.5E-14 102.0 9.2 86 406-495 7-92 (260)
234 cd05101 PTKc_FGFR2 Catalytic d 98.9 2.1E-09 4.7E-14 105.6 8.3 89 405-494 15-112 (304)
235 cd08217 STKc_Nek2 Catalytic do 98.9 3.3E-09 7.2E-14 101.5 9.5 89 406-494 1-92 (265)
236 cd07873 STKc_PCTAIRE1 Catalyti 98.9 3.9E-09 8.5E-14 103.6 10.1 88 405-494 6-94 (301)
237 cd06628 STKc_MAPKKK_Byr2_like 98.9 5.5E-09 1.2E-13 100.5 11.0 88 407-494 2-97 (267)
238 cd06917 STKc_NAK1_like Catalyt 98.9 4E-09 8.7E-14 102.1 10.1 88 406-494 2-93 (277)
239 cd05575 STKc_SGK Catalytic dom 98.9 3.4E-09 7.4E-14 105.3 9.8 84 411-494 1-87 (323)
240 cd05570 STKc_PKC Catalytic dom 98.9 3.1E-09 6.6E-14 105.4 9.4 84 411-494 1-87 (318)
241 cd05089 PTKc_Tie1 Catalytic do 98.9 2.7E-09 5.8E-14 104.6 8.9 90 405-495 2-95 (297)
242 cd05574 STKc_phototropin_like 98.9 3.9E-09 8.5E-14 104.4 10.0 89 406-494 2-92 (316)
243 cd05604 STKc_SGK3 Catalytic do 98.9 3.7E-09 8E-14 105.1 9.9 84 411-494 1-87 (325)
244 KOG0588 Serine/threonine prote 98.9 1.5E-09 3.3E-14 110.9 7.0 90 405-494 12-103 (786)
245 cd05043 PTK_Ryk Pseudokinase d 98.9 2.1E-09 4.5E-14 104.3 7.8 90 404-494 5-100 (280)
246 cd06612 STKc_MST1_2 Catalytic 98.9 3.5E-09 7.5E-14 101.0 9.3 86 405-494 3-89 (256)
247 cd07836 STKc_Pho85 Catalytic d 98.9 4.1E-09 8.8E-14 102.3 9.9 87 406-494 1-88 (284)
248 cd05592 STKc_nPKC_theta_delta 98.9 3.6E-09 7.7E-14 104.8 9.6 84 411-494 1-87 (316)
249 cd06655 STKc_PAK2 Catalytic do 98.9 4.4E-09 9.5E-14 103.1 10.1 88 405-494 19-107 (296)
250 KOG0578 p21-activated serine/t 98.9 8.2E-10 1.8E-14 111.1 4.8 88 405-494 273-361 (550)
251 cd05057 PTKc_EGFR_like Catalyt 98.9 3.8E-09 8.3E-14 102.4 9.5 89 405-495 7-100 (279)
252 cd06606 STKc_MAPKKK Catalytic 98.9 6.1E-09 1.3E-13 99.1 10.7 89 406-494 1-92 (260)
253 cd05614 STKc_MSK2_N N-terminal 98.9 3.6E-09 7.8E-14 105.5 9.5 89 406-494 1-96 (332)
254 cd05032 PTKc_InsR_like Catalyt 98.9 2.7E-09 5.7E-14 103.3 8.3 89 405-494 6-100 (277)
255 cd05616 STKc_cPKC_beta Catalyt 98.9 4.2E-09 9E-14 104.7 9.9 89 406-494 1-92 (323)
256 cd05094 PTKc_TrkC Catalytic do 98.9 2.9E-09 6.3E-14 104.0 8.6 87 406-494 6-98 (291)
257 cd06605 PKc_MAPKK Catalytic do 98.9 2.9E-09 6.3E-14 102.2 8.4 88 406-494 2-90 (265)
258 cd06614 STKc_PAK Catalytic dom 98.9 4.8E-09 1E-13 102.1 10.0 89 403-494 17-106 (286)
259 cd05610 STKc_MASTL Catalytic d 98.9 4.2E-09 9E-14 114.7 10.6 90 405-494 4-95 (669)
260 cd06644 STKc_STK10_LOK Catalyt 98.9 4.5E-09 9.7E-14 102.7 9.9 88 405-494 12-100 (292)
261 KOG0201 Serine/threonine prote 98.9 3.6E-10 7.8E-15 110.3 2.0 88 407-495 15-103 (467)
262 cd05077 PTK_Jak1_rpt1 Pseudoki 98.9 3.4E-09 7.4E-14 101.9 8.9 82 411-494 1-95 (262)
263 PLN00009 cyclin-dependent kina 98.9 4.9E-09 1.1E-13 102.5 10.1 89 405-494 2-91 (294)
264 cd07833 STKc_CDKL Catalytic do 98.9 2.9E-09 6.3E-14 103.5 8.4 88 406-493 2-90 (288)
265 cd05037 PTK_Jak_rpt1 Pseudokin 98.9 2.8E-09 6.1E-14 101.9 8.1 80 411-494 1-91 (259)
266 cd06651 STKc_MEKK3 Catalytic d 98.9 7E-09 1.5E-13 99.8 10.9 89 406-494 3-97 (266)
267 KOG0661 MAPK related serine/th 98.9 1.9E-10 4.1E-15 113.2 -0.1 87 406-494 11-100 (538)
268 cd05115 PTKc_Zap-70 Catalytic 98.9 4.2E-09 9.2E-14 100.9 9.2 80 413-494 3-85 (257)
269 cd05615 STKc_cPKC_alpha Cataly 98.9 4E-09 8.7E-14 104.8 9.2 89 406-494 1-92 (323)
270 cd06627 STKc_Cdc7_like Catalyt 98.9 8.5E-09 1.8E-13 98.1 11.0 89 406-494 1-90 (254)
271 KOG0694 Serine/threonine prote 98.9 2.1E-09 4.5E-14 110.5 7.0 92 403-494 366-460 (694)
272 cd05617 STKc_aPKC_zeta Catalyt 98.9 5.3E-09 1.1E-13 104.1 9.9 84 411-494 1-87 (327)
273 cd05040 PTKc_Ack_like Catalyti 98.9 3.8E-09 8.2E-14 101.0 8.5 82 411-494 1-86 (257)
274 cd05092 PTKc_TrkA Catalytic do 98.9 4.2E-09 9.1E-14 102.3 9.0 87 406-494 6-98 (280)
275 cd05047 PTKc_Tie Catalytic dom 98.9 5E-09 1.1E-13 101.1 9.3 84 411-495 1-88 (270)
276 cd08223 STKc_Nek4 Catalytic do 98.9 5.3E-09 1.2E-13 99.9 9.4 89 406-494 1-91 (257)
277 KOG4721 Serine/threonine prote 98.9 8.3E-10 1.8E-14 110.7 3.8 76 410-495 129-204 (904)
278 KOG0585 Ca2+/calmodulin-depend 98.9 3.9E-09 8.4E-14 104.1 8.4 90 402-491 94-198 (576)
279 cd00192 PTKc Catalytic domain 98.9 5.4E-09 1.2E-13 99.8 9.4 84 411-495 1-88 (262)
280 COG4886 Leucine-rich repeat (L 98.9 8.7E-10 1.9E-14 112.7 4.1 152 69-224 116-270 (394)
281 KOG2052 Activin A type IB rece 98.9 1.5E-09 3.2E-14 106.2 5.4 84 406-495 212-301 (513)
282 cd05044 PTKc_c-ros Catalytic d 98.9 2.1E-09 4.5E-14 103.5 6.5 83 411-494 1-90 (269)
283 KOG1259 Nischarin, modulator o 98.9 1.6E-10 3.5E-15 107.4 -1.2 130 70-203 285-415 (490)
284 cd05577 STKc_GRK Catalytic dom 98.9 5.8E-09 1.3E-13 101.1 9.6 82 413-494 1-84 (277)
285 cd05099 PTKc_FGFR4 Catalytic d 98.9 3.3E-09 7.1E-14 104.9 7.9 89 405-494 12-109 (314)
286 cd06643 STKc_SLK Catalytic dom 98.9 5.4E-09 1.2E-13 101.5 9.4 85 408-494 8-93 (282)
287 cd07864 STKc_CDK12 Catalytic d 98.9 4.8E-09 1E-13 102.9 9.0 91 402-493 4-105 (302)
288 cd07870 STKc_PFTAIRE2 Catalyti 98.9 7.2E-09 1.6E-13 101.1 10.2 90 403-494 3-93 (291)
289 cd08215 STKc_Nek Catalytic dom 98.9 8.4E-09 1.8E-13 98.2 10.2 89 406-494 1-90 (258)
290 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.9 7.6E-09 1.6E-13 100.5 10.1 86 408-494 7-99 (283)
291 cd06613 STKc_MAP4K3_like Catal 98.9 9.1E-09 2E-13 98.5 10.5 88 405-494 3-91 (262)
292 cd06617 PKc_MKK3_6 Catalytic d 98.9 5.1E-09 1.1E-13 101.6 8.8 88 405-494 1-90 (283)
293 cd07856 STKc_Sty1_Hog1 Catalyt 98.9 4.9E-09 1.1E-13 104.4 8.9 94 400-494 5-100 (328)
294 cd05602 STKc_SGK1 Catalytic do 98.9 6.4E-09 1.4E-13 103.4 9.6 84 411-494 1-87 (325)
295 cd07835 STKc_CDK1_like Catalyt 98.9 5.5E-09 1.2E-13 101.4 8.8 87 407-494 1-88 (283)
296 smart00219 TyrKc Tyrosine kina 98.9 8E-09 1.7E-13 98.5 9.7 86 408-494 2-92 (258)
297 PRK09188 serine/threonine prot 98.9 6.5E-09 1.4E-13 103.7 9.3 86 404-492 17-107 (365)
298 PLN03224 probable serine/threo 98.9 3.4E-09 7.3E-14 110.3 7.5 93 403-495 143-277 (507)
299 cd05572 STKc_cGK_PKG Catalytic 98.9 7.7E-09 1.7E-13 99.2 9.4 83 413-495 1-85 (262)
300 cd08528 STKc_Nek10 Catalytic d 98.9 9E-09 2E-13 99.1 10.0 89 406-494 1-100 (269)
301 cd05060 PTKc_Syk_like Catalyti 98.9 8E-09 1.7E-13 98.8 9.5 83 411-495 1-87 (257)
302 KOG0592 3-phosphoinositide-dep 98.9 2.4E-09 5.2E-14 107.2 5.9 95 401-495 69-166 (604)
303 cd05620 STKc_nPKC_delta Cataly 98.9 8E-09 1.7E-13 102.3 9.6 84 411-494 1-87 (316)
304 cd05091 PTKc_Ror2 Catalytic do 98.9 4.1E-09 8.9E-14 102.4 7.4 87 407-494 7-99 (283)
305 cd08530 STKc_CNK2-like Catalyt 98.9 3.9E-09 8.4E-14 100.6 7.1 89 406-494 1-90 (256)
306 PF13855 LRR_8: Leucine rich r 98.9 1.3E-09 2.7E-14 79.8 2.8 59 140-198 2-60 (61)
307 PF13855 LRR_8: Leucine rich r 98.9 1.5E-09 3.3E-14 79.3 3.2 61 115-175 1-61 (61)
308 cd07843 STKc_CDC2L1 Catalytic 98.9 6.5E-09 1.4E-13 101.6 8.7 89 405-494 5-96 (293)
309 cd05054 PTKc_VEGFR Catalytic d 98.9 3.6E-09 7.7E-14 105.8 7.0 89 405-494 7-103 (337)
310 cd08226 PK_STRAD_beta Pseudoki 98.9 7.9E-09 1.7E-13 102.9 9.4 84 411-494 4-90 (328)
311 cd05074 PTKc_Tyro3 Catalytic d 98.9 7.3E-09 1.6E-13 100.0 8.9 88 407-494 1-98 (273)
312 cd07837 STKc_CdkB_plant Cataly 98.9 7.5E-09 1.6E-13 101.1 9.1 89 405-494 1-96 (295)
313 KOG0574 STE20-like serine/thre 98.9 3.5E-10 7.6E-15 105.1 -0.3 84 407-494 35-119 (502)
314 cd06608 STKc_myosinIII_like Ca 98.9 8.2E-09 1.8E-13 99.4 9.2 90 402-494 3-100 (275)
315 cd06653 STKc_MEKK3_like_1 Cata 98.9 1.4E-08 2.9E-13 97.7 10.7 90 405-494 2-97 (264)
316 cd07862 STKc_CDK6 Catalytic do 98.9 1.1E-08 2.5E-13 99.6 10.2 88 406-494 2-99 (290)
317 cd05078 PTK_Jak2_Jak3_rpt1 Pse 98.9 2.2E-09 4.8E-14 102.8 5.0 83 411-495 1-91 (258)
318 cd05056 PTKc_FAK Catalytic dom 98.9 5.8E-09 1.3E-13 100.6 7.9 87 406-494 7-97 (270)
319 cd05613 STKc_MSK1_N N-terminal 98.9 9.5E-09 2.1E-13 100.2 9.5 89 406-494 1-96 (290)
320 cd05100 PTKc_FGFR3 Catalytic d 98.9 6.4E-09 1.4E-13 103.8 8.4 88 406-494 13-109 (334)
321 cd06636 STKc_MAP4K4_6 Catalyti 98.8 9E-09 2E-13 99.9 9.1 96 396-494 7-110 (282)
322 cd05082 PTKc_Csk Catalytic dom 98.8 1E-08 2.2E-13 98.1 9.3 85 405-494 6-91 (256)
323 cd05111 PTK_HER3 Pseudokinase 98.8 9.3E-09 2E-13 99.8 9.0 87 406-494 8-99 (279)
324 cd05083 PTKc_Chk Catalytic dom 98.8 7.4E-09 1.6E-13 98.9 8.0 84 405-494 6-89 (254)
325 cd07839 STKc_CDK5 Catalytic do 98.8 4.9E-09 1.1E-13 101.9 6.6 87 407-494 2-89 (284)
326 cd05058 PTKc_Met_Ron Catalytic 98.8 1E-08 2.2E-13 98.3 8.7 83 411-494 1-88 (262)
327 cd07876 STKc_JNK2 Catalytic do 98.8 1.3E-08 2.7E-13 102.8 9.7 89 404-493 20-115 (359)
328 cd05109 PTKc_HER2 Catalytic do 98.8 1.1E-08 2.4E-13 99.2 8.9 89 405-495 7-100 (279)
329 cd06607 STKc_TAO Catalytic dom 98.8 1.2E-08 2.7E-13 100.4 9.3 88 405-493 15-104 (307)
330 cd06659 STKc_PAK6 Catalytic do 98.8 8.6E-09 1.9E-13 101.1 8.0 84 409-494 25-109 (297)
331 cd05122 PKc_STE Catalytic doma 98.8 2.8E-08 6.1E-13 94.1 10.9 87 406-494 1-88 (253)
332 KOG0577 Serine/threonine prote 98.8 1.4E-09 3E-14 109.5 1.8 86 407-493 28-115 (948)
333 cd06658 STKc_PAK5 Catalytic do 98.8 7.4E-09 1.6E-13 101.3 6.9 83 410-494 27-110 (292)
334 cd07845 STKc_CDK10 Catalytic d 98.8 1.7E-08 3.8E-13 99.4 9.6 90 404-494 6-98 (309)
335 COG4886 Leucine-rich repeat (L 98.8 3.3E-09 7.1E-14 108.5 4.5 159 60-223 81-246 (394)
336 cd05581 STKc_PDK1 Catalytic do 98.8 6.4E-09 1.4E-13 100.5 6.3 90 405-494 1-93 (280)
337 cd06648 STKc_PAK_II Catalytic 98.8 2.5E-08 5.4E-13 97.2 10.4 86 407-494 21-107 (285)
338 cd07840 STKc_CDK9_like Catalyt 98.8 1.8E-08 3.9E-13 97.8 9.3 87 407-494 1-90 (287)
339 PHA03212 serine/threonine kina 98.8 1.9E-08 4E-13 102.7 9.8 82 404-494 91-173 (391)
340 cd06657 STKc_PAK4 Catalytic do 98.8 1.8E-08 4E-13 98.5 9.3 83 410-494 25-108 (292)
341 cd06635 STKc_TAO1 Catalytic do 98.8 2.5E-08 5.4E-13 98.8 10.2 87 407-494 27-115 (317)
342 KOG0607 MAP kinase-interacting 98.8 3.9E-09 8.4E-14 99.2 4.0 93 396-495 74-168 (463)
343 cd07880 STKc_p38gamma_MAPK12 C 98.8 2.1E-08 4.6E-13 100.5 9.4 91 403-494 13-110 (343)
344 cd07877 STKc_p38alpha_MAPK14 C 98.8 2.4E-08 5.1E-13 100.2 9.6 99 395-494 7-112 (345)
345 cd07865 STKc_CDK9 Catalytic do 98.8 2.3E-08 4.9E-13 98.4 9.3 89 405-494 12-109 (310)
346 cd05579 STKc_MAST_like Catalyt 98.8 1.4E-08 3E-13 97.2 7.1 82 413-494 1-84 (265)
347 KOG0666 Cyclin C-dependent kin 98.8 1.9E-09 4.1E-14 100.9 1.0 91 404-495 23-119 (438)
348 PTZ00036 glycogen synthase kin 98.8 2.2E-08 4.7E-13 103.8 9.1 84 404-494 65-157 (440)
349 cd07842 STKc_CDK8_like Catalyt 98.8 3.4E-08 7.4E-13 97.4 10.1 87 407-494 2-94 (316)
350 cd05110 PTKc_HER4 Catalytic do 98.8 2E-08 4.3E-13 98.8 8.3 88 405-494 7-99 (303)
351 cd07878 STKc_p38beta_MAPK11 Ca 98.8 1.8E-08 3.8E-13 101.0 7.8 91 403-494 13-110 (343)
352 cd07863 STKc_CDK4 Catalytic do 98.7 3.2E-08 6.9E-13 96.3 9.3 87 407-494 2-97 (288)
353 cd05583 STKc_MSK_N N-terminal 98.7 2.6E-08 5.6E-13 97.1 8.3 89 406-494 1-96 (288)
354 cd07852 STKc_MAPK15 Catalytic 98.7 2.2E-08 4.7E-13 100.1 7.9 90 404-494 6-99 (337)
355 KOG0660 Mitogen-activated prot 98.7 1.3E-08 2.8E-13 97.4 5.5 89 406-495 23-117 (359)
356 cd07879 STKc_p38delta_MAPK13 C 98.7 3.5E-08 7.5E-13 98.9 9.0 88 405-493 15-109 (342)
357 cd07875 STKc_JNK1 Catalytic do 98.7 3.9E-08 8.4E-13 99.4 9.3 89 404-493 23-118 (364)
358 cd07874 STKc_JNK3 Catalytic do 98.7 3.5E-08 7.6E-13 99.4 8.8 90 403-493 15-111 (355)
359 KOG1989 ARK protein kinase fam 98.7 2.2E-08 4.7E-13 105.9 7.3 87 406-494 38-133 (738)
360 PTZ00024 cyclin-dependent prot 98.7 4.7E-08 1E-12 97.6 9.4 84 410-494 14-110 (335)
361 cd05586 STKc_Sck1_like Catalyt 98.7 3.9E-08 8.5E-13 97.9 8.7 82 413-494 1-87 (330)
362 KOG0200 Fibroblast/platelet-de 98.7 2.4E-08 5.2E-13 107.3 7.4 95 400-495 291-394 (609)
363 cd07868 STKc_CDK8 Catalytic do 98.7 5.9E-08 1.3E-12 96.0 9.5 80 410-494 6-90 (317)
364 PHA03211 serine/threonine kina 98.7 5.4E-08 1.2E-12 101.1 9.6 82 404-494 168-250 (461)
365 cd07867 STKc_CDC2L6 Catalytic 98.7 6.5E-08 1.4E-12 95.6 9.8 80 410-494 6-90 (317)
366 cd06633 STKc_TAO3 Catalytic do 98.7 8.9E-08 1.9E-12 94.7 10.7 87 407-494 23-111 (313)
367 cd07855 STKc_ERK5 Catalytic do 98.7 2.7E-08 5.8E-13 99.3 7.1 89 405-494 5-98 (334)
368 smart00221 STYKc Protein kinas 98.7 7.2E-08 1.6E-12 89.7 9.5 87 407-494 1-88 (225)
369 cd07829 STKc_CDK_like Catalyti 98.7 2.3E-08 5.1E-13 96.8 6.3 87 407-494 1-88 (282)
370 cd08216 PK_STRAD Pseudokinase 98.7 3.9E-08 8.5E-13 97.0 7.8 83 411-494 8-90 (314)
371 cd07830 STKc_MAK_like Catalyti 98.7 2.5E-08 5.4E-13 96.7 6.3 86 407-494 1-88 (283)
372 KOG4279 Serine/threonine prote 98.7 1.6E-08 3.4E-13 103.9 4.7 83 411-495 581-664 (1226)
373 cd07831 STKc_MOK Catalytic dom 98.7 7.3E-08 1.6E-12 93.3 9.4 86 407-494 1-90 (282)
374 cd05633 STKc_GRK3 Catalytic do 98.7 9.1E-08 2E-12 92.9 10.0 83 412-494 1-88 (279)
375 cd05123 STKc_AGC Catalytic dom 98.7 4E-08 8.7E-13 93.3 7.3 82 413-494 1-84 (250)
376 cd05611 STKc_Rim15_like Cataly 98.7 8.8E-08 1.9E-12 91.7 9.7 84 411-494 2-88 (260)
377 cd07858 STKc_TEY_MAPK_plant Ca 98.7 4.3E-08 9.4E-13 98.0 7.7 89 405-494 5-99 (337)
378 KOG3207 Beta-tubulin folding c 98.7 5.1E-09 1.1E-13 102.3 0.6 155 69-223 146-315 (505)
379 cd07850 STKc_JNK Catalytic dom 98.7 8.6E-08 1.9E-12 96.5 9.6 90 404-494 15-111 (353)
380 PRK10345 hypothetical protein; 98.7 1.2E-07 2.5E-12 87.7 9.5 84 407-494 4-98 (210)
381 cd08222 STKc_Nek11 Catalytic d 98.7 3E-08 6.4E-13 95.0 5.7 88 407-494 2-93 (260)
382 cd07838 STKc_CDK4_6_like Catal 98.7 8.9E-08 1.9E-12 93.0 9.1 87 407-494 1-96 (287)
383 cd06634 STKc_TAO2 Catalytic do 98.6 9.7E-08 2.1E-12 94.1 9.3 87 407-494 17-105 (308)
384 KOG0612 Rho-associated, coiled 98.6 4.8E-09 1E-13 113.0 -0.2 97 398-494 68-166 (1317)
385 PHA03209 serine/threonine kina 98.6 8.5E-08 1.8E-12 96.7 8.8 82 404-494 65-147 (357)
386 KOG4237 Extracellular matrix p 98.6 3.7E-09 8E-14 102.0 -1.2 115 108-222 60-177 (498)
387 cd07849 STKc_ERK1_2_like Catal 98.6 7.7E-08 1.7E-12 96.1 8.2 89 404-494 4-98 (336)
388 cd05118 STKc_CMGC Catalytic do 98.6 6.9E-08 1.5E-12 93.5 7.5 87 407-494 1-88 (283)
389 cd07866 STKc_BUR1 Catalytic do 98.6 7.5E-08 1.6E-12 94.7 7.4 90 404-494 7-105 (311)
390 cd07834 STKc_MAPK Catalytic do 98.6 6E-08 1.3E-12 96.5 6.7 88 406-494 1-94 (330)
391 cd06616 PKc_MKK4 Catalytic dom 98.6 1.1E-07 2.5E-12 92.4 8.5 84 406-491 5-90 (288)
392 cd05606 STKc_beta_ARK Catalyti 98.6 2.3E-07 4.9E-12 90.0 10.3 83 412-494 1-88 (278)
393 PHA03390 pk1 serine/threonine- 98.6 2.3E-07 5E-12 89.5 10.1 90 398-494 7-100 (267)
394 PHA03207 serine/threonine kina 98.6 1.3E-07 2.9E-12 96.5 8.8 82 405-494 92-176 (392)
395 cd07851 STKc_p38 Catalytic dom 98.6 5.7E-08 1.2E-12 97.4 5.3 90 404-494 14-110 (343)
396 cd06618 PKc_MKK7 Catalytic dom 98.6 2E-07 4.3E-12 91.3 8.7 87 405-493 15-103 (296)
397 cd07854 STKc_MAPK4_6 Catalytic 98.6 1.5E-07 3.2E-12 94.3 7.7 87 405-494 5-106 (342)
398 KOG0587 Traf2- and Nck-interac 98.5 2.6E-07 5.7E-12 97.6 9.3 93 400-495 14-113 (953)
399 cd05147 RIO1_euk RIO kinase fa 98.5 1.6E-07 3.5E-12 85.6 6.5 81 410-492 2-106 (190)
400 KOG0599 Phosphorylase kinase g 98.5 4.7E-08 1E-12 90.1 2.5 90 405-494 17-114 (411)
401 KOG0690 Serine/threonine prote 98.5 4.9E-08 1.1E-12 92.0 2.3 91 404-494 167-259 (516)
402 cd00180 PKc Catalytic domain o 98.5 7.9E-07 1.7E-11 81.2 10.3 81 413-494 1-82 (215)
403 PTZ00284 protein kinase; Provi 98.5 3E-07 6.5E-12 96.3 8.1 93 398-494 122-222 (467)
404 KOG4645 MAPKKK (MAP kinase kin 98.5 2.4E-08 5.2E-13 109.2 -0.9 92 403-494 1233-1325(1509)
405 KOG1035 eIF-2alpha kinase GCN2 98.4 6E-08 1.3E-12 105.6 1.8 75 402-477 476-551 (1351)
406 cd07857 STKc_MPK1 Catalytic do 98.4 7.8E-07 1.7E-11 88.7 9.5 87 407-494 2-96 (332)
407 KOG0584 Serine/threonine prote 98.4 1.1E-07 2.4E-12 97.1 3.0 85 410-494 45-134 (632)
408 PHA03210 serine/threonine kina 98.4 3.2E-07 7E-12 96.7 6.3 90 404-494 147-253 (501)
409 PRK14879 serine/threonine prot 98.4 8.2E-07 1.8E-11 82.3 8.1 83 411-494 2-90 (211)
410 cd05145 RIO1_like RIO kinase f 98.4 1.3E-06 2.7E-11 79.8 8.7 79 410-490 2-104 (190)
411 KOG0576 Mitogen-activated prot 98.4 4.4E-08 9.5E-13 100.4 -1.2 88 404-493 14-102 (829)
412 KOG1151 Tousled-like protein k 98.4 1.1E-07 2.5E-12 92.9 1.6 89 407-495 465-560 (775)
413 PRK09605 bifunctional UGMP fam 98.4 9.4E-07 2E-11 94.0 8.7 91 404-494 332-427 (535)
414 KOG0579 Ste20-like serine/thre 98.4 5.9E-08 1.3E-12 98.7 -0.5 82 410-493 37-119 (1187)
415 TIGR03724 arch_bud32 Kae1-asso 98.4 1.1E-06 2.4E-11 80.6 7.9 82 412-494 1-88 (199)
416 KOG2345 Serine/threonine prote 98.4 1.3E-07 2.9E-12 86.1 1.5 88 405-494 21-114 (302)
417 smart00220 S_TKc Serine/Threon 98.4 1.2E-06 2.5E-11 82.3 7.9 77 417-494 1-78 (244)
418 PF08263 LRRNT_2: Leucine rich 98.3 8E-07 1.7E-11 59.6 4.7 39 27-67 2-43 (43)
419 PRK10359 lipopolysaccharide co 98.3 1.6E-06 3.6E-11 80.6 8.0 89 404-493 30-133 (232)
420 KOG3207 Beta-tubulin folding c 98.3 9.9E-08 2.2E-12 93.4 -0.6 155 68-222 171-339 (505)
421 KOG4579 Leucine-rich repeat (L 98.3 2.6E-08 5.7E-13 82.6 -3.9 107 71-181 29-140 (177)
422 KOG4579 Leucine-rich repeat (L 98.3 2E-08 4.3E-13 83.3 -5.0 103 95-201 29-137 (177)
423 KOG0596 Dual specificity; seri 98.3 7.8E-07 1.7E-11 89.7 4.8 89 406-495 362-451 (677)
424 cd05576 STKc_RPK118_like Catal 98.3 2.1E-06 4.6E-11 81.1 7.6 72 416-494 4-76 (237)
425 KOG1859 Leucine-rich repeat pr 98.3 9.9E-08 2.1E-12 98.7 -1.7 121 95-222 166-292 (1096)
426 KOG1152 Signal transduction se 98.3 9.2E-07 2E-11 89.5 4.9 90 405-494 561-661 (772)
427 KOG0667 Dual-specificity tyros 98.3 1.4E-06 3.1E-11 89.7 6.3 86 406-495 187-279 (586)
428 KOG1024 Receptor-like protein 98.2 2.6E-06 5.6E-11 82.6 7.1 97 398-495 277-380 (563)
429 KOG0986 G protein-coupled rece 98.2 5.4E-07 1.2E-11 88.7 2.1 91 404-494 184-276 (591)
430 KOG1006 Mitogen-activated prot 98.2 3.2E-07 7E-12 84.4 0.2 82 409-492 68-151 (361)
431 KOG1859 Leucine-rich repeat pr 98.2 2.6E-08 5.7E-13 102.8 -8.1 107 89-199 183-291 (1096)
432 KOG0608 Warts/lats-like serine 98.2 1.3E-06 2.8E-11 89.3 3.9 90 405-494 629-720 (1034)
433 cd05144 RIO2_C RIO kinase fami 98.2 5.4E-06 1.2E-10 76.1 7.7 83 407-493 17-121 (198)
434 KOG0531 Protein phosphatase 1, 98.2 3.3E-07 7.3E-12 94.2 -0.6 125 70-200 73-199 (414)
435 KOG1909 Ran GTPase-activating 98.2 7.7E-07 1.7E-11 85.1 1.9 154 69-223 30-227 (382)
436 KOG1909 Ran GTPase-activating 98.2 7.1E-07 1.5E-11 85.3 1.5 154 69-222 92-283 (382)
437 KOG0531 Protein phosphatase 1, 98.1 2.6E-07 5.6E-12 95.0 -1.8 126 69-200 95-221 (414)
438 KOG0696 Serine/threonine prote 98.1 6.7E-07 1.4E-11 87.0 0.1 90 406-495 350-442 (683)
439 KOG0669 Cyclin T-dependent kin 98.1 4.8E-08 1E-12 89.1 -7.6 87 407-494 19-114 (376)
440 PF12799 LRR_4: Leucine Rich r 98.1 5E-06 1.1E-10 55.9 3.8 36 116-152 2-37 (44)
441 KOG0668 Casein kinase II, alph 98.0 1.2E-06 2.6E-11 79.0 0.3 84 404-492 37-124 (338)
442 KOG0195 Integrin-linked kinase 98.0 8.6E-07 1.9E-11 81.8 -1.2 85 410-495 195-279 (448)
443 PLN03225 Serine/threonine-prot 98.0 8.7E-06 1.9E-10 86.8 6.1 86 403-494 130-226 (566)
444 KOG0604 MAP kinase-activated p 98.0 1.9E-06 4.2E-11 80.7 0.4 85 403-494 59-150 (400)
445 smart00090 RIO RIO-like kinase 97.9 2.6E-05 5.7E-10 73.6 7.3 84 406-493 29-138 (237)
446 PF12799 LRR_4: Leucine Rich r 97.9 1.1E-05 2.4E-10 54.3 3.3 36 140-176 2-37 (44)
447 KOG0695 Serine/threonine prote 97.9 5.3E-06 1.1E-10 78.7 2.2 92 403-494 248-342 (593)
448 cd05120 APH_ChoK_like Aminogly 97.8 4.6E-05 1E-09 65.7 6.5 77 410-491 3-81 (155)
449 KOG1167 Serine/threonine prote 97.8 1.7E-05 3.7E-10 77.7 3.9 90 400-493 31-125 (418)
450 KOG4658 Apoptotic ATPase [Sign 97.8 1.7E-05 3.7E-10 87.9 4.0 126 70-198 524-653 (889)
451 KOG2982 Uncharacterized conser 97.8 1.1E-05 2.4E-10 75.6 1.9 83 69-151 71-158 (418)
452 PRK15386 type III secretion pr 97.8 0.00011 2.5E-09 73.5 9.0 131 69-219 52-187 (426)
453 KOG1027 Serine/threonine prote 97.7 3.3E-05 7.1E-10 81.8 3.9 81 407-494 511-593 (903)
454 TIGR01982 UbiB 2-polyprenylphe 97.7 7E-05 1.5E-09 77.3 6.3 85 410-494 122-249 (437)
455 KOG4658 Apoptotic ATPase [Sign 97.6 4.4E-05 9.6E-10 84.7 4.7 129 90-220 520-653 (889)
456 cd05119 RIO RIO kinase family, 97.6 0.00014 2.9E-09 66.0 6.9 76 410-489 2-101 (187)
457 PRK12274 serine/threonine prot 97.6 0.0003 6.6E-09 64.4 8.5 80 409-493 6-88 (218)
458 PRK15386 type III secretion pr 97.6 0.00039 8.5E-09 69.7 9.8 112 69-198 72-188 (426)
459 KOG1345 Serine/threonine kinas 97.5 4.9E-05 1.1E-09 70.5 2.7 86 405-493 24-112 (378)
460 PRK04750 ubiB putative ubiquin 97.5 4.9E-05 1.1E-09 79.7 2.9 88 405-493 120-251 (537)
461 COG5238 RNA1 Ran GTPase-activa 97.5 0.00011 2.4E-09 68.2 4.5 153 69-222 30-227 (388)
462 PHA02882 putative serine/threo 97.5 0.00047 1E-08 67.4 9.1 82 405-486 12-110 (294)
463 KOG0664 Nemo-like MAPK-related 97.5 6.9E-06 1.5E-10 76.0 -3.8 87 406-493 54-146 (449)
464 COG0515 SPS1 Serine/threonine 97.4 0.00076 1.7E-08 65.6 9.9 86 407-494 2-89 (384)
465 KOG1644 U2-associated snRNP A' 97.4 0.00031 6.7E-09 62.6 6.0 100 116-217 43-148 (233)
466 KOG2120 SCF ubiquitin ligase, 97.3 1.1E-05 2.4E-10 75.7 -4.6 158 70-229 186-356 (419)
467 KOG1290 Serine/threonine prote 97.3 0.00045 9.9E-09 69.2 5.8 86 405-494 78-176 (590)
468 KOG1644 U2-associated snRNP A' 97.2 0.00071 1.5E-08 60.4 5.6 105 94-199 43-152 (233)
469 KOG0984 Mitogen-activated prot 97.2 0.00025 5.4E-09 63.5 2.7 85 407-493 48-134 (282)
470 KOG0983 Mitogen-activated prot 97.1 0.00017 3.7E-09 67.1 1.5 76 410-486 97-174 (391)
471 KOG0671 LAMMER dual specificit 97.1 0.00035 7.5E-09 68.0 2.7 88 404-495 88-182 (415)
472 KOG0603 Ribosomal protein S6 k 97.0 0.00048 1E-08 71.3 2.9 85 404-494 321-407 (612)
473 PRK01723 3-deoxy-D-manno-octul 96.9 0.0036 7.9E-08 59.2 8.3 84 410-494 36-138 (239)
474 KOG1163 Casein kinase (serine/ 96.9 0.0015 3.2E-08 60.0 5.1 84 405-493 15-100 (341)
475 cd05154 ACAD10_11_like Acyl-Co 96.8 0.0021 4.6E-08 59.6 6.0 82 411-493 4-90 (223)
476 KOG3665 ZYG-1-like serine/thre 96.8 0.00044 9.5E-09 74.9 1.2 109 115-225 148-266 (699)
477 KOG2120 SCF ubiquitin ligase, 96.8 0.00022 4.7E-09 67.2 -1.2 150 69-218 210-372 (419)
478 KOG2739 Leucine-rich acidic nu 96.7 0.0012 2.7E-08 61.3 3.3 38 115-152 65-104 (260)
479 KOG1164 Casein kinase (serine/ 96.6 0.0061 1.3E-07 60.5 7.6 85 406-493 19-110 (322)
480 KOG1166 Mitotic checkpoint ser 96.6 0.0013 2.9E-08 72.6 2.9 87 403-494 696-785 (974)
481 KOG2982 Uncharacterized conser 96.6 0.0005 1.1E-08 64.8 -0.4 83 116-198 72-157 (418)
482 KOG0614 cGMP-dependent protein 96.4 0.00022 4.7E-09 71.7 -4.0 91 404-494 419-511 (732)
483 KOG3665 ZYG-1-like serine/thre 96.3 0.0025 5.5E-08 69.2 2.9 133 69-203 122-266 (699)
484 PF00560 LRR_1: Leucine Rich R 96.2 0.0019 4.2E-08 36.2 0.7 19 117-136 2-20 (22)
485 cd05151 ChoK Choline Kinase (C 96.1 0.01 2.2E-07 52.5 5.4 75 411-491 4-79 (170)
486 KOG2739 Leucine-rich acidic nu 96.1 0.0038 8.2E-08 58.1 2.5 60 115-176 43-104 (260)
487 PF00560 LRR_1: Leucine Rich R 95.9 0.003 6.6E-08 35.4 0.8 19 165-184 2-20 (22)
488 PF13306 LRR_5: Leucine rich r 95.9 0.026 5.6E-07 47.4 6.8 96 70-171 13-111 (129)
489 KOG0665 Jun-N-terminal kinase 95.4 0.0052 1.1E-07 58.7 0.6 84 409-494 21-111 (369)
490 COG5238 RNA1 Ran GTPase-activa 95.4 0.017 3.8E-07 54.1 3.9 139 87-225 86-258 (388)
491 KOG1165 Casein kinase (serine/ 95.3 0.033 7.1E-07 53.8 5.7 83 406-493 29-113 (449)
492 COG2112 Predicted Ser/Thr prot 95.3 0.046 9.9E-07 48.4 6.0 76 410-493 27-102 (201)
493 PF13306 LRR_5: Leucine rich r 95.1 0.062 1.3E-06 45.0 6.4 102 88-195 7-111 (129)
494 KOG2123 Uncharacterized conser 94.5 0.0018 4E-08 60.6 -4.9 61 116-178 42-103 (388)
495 KOG0670 U4/U6-associated splic 94.5 0.022 4.7E-07 58.0 2.1 85 406-494 433-524 (752)
496 KOG1235 Predicted unusual prot 93.6 0.19 4E-06 52.8 7.1 50 390-440 135-196 (538)
497 KOG2123 Uncharacterized conser 93.4 0.006 1.3E-07 57.2 -3.6 83 116-202 20-103 (388)
498 PF03109 ABC1: ABC1 family; I 93.4 0.033 7.2E-07 46.4 1.1 31 410-440 16-46 (119)
499 PF13504 LRR_7: Leucine rich r 92.7 0.072 1.6E-06 27.6 1.3 9 118-126 4-12 (17)
500 KOG3741 Poly(A) ribonuclease s 92.6 0.2 4.3E-06 51.5 5.3 73 418-492 289-367 (655)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=7.9e-36 Score=338.08 Aligned_cols=349 Identities=27% Similarity=0.467 Sum_probs=201.9
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
.+++.|+|++|.++|.+|..+.+++.|+.|||++|.++|.+|..+. ++|+.|+|++|++.|.+|..+ .+++|+.|+|
T Consensus 404 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~l 482 (968)
T PLN00113 404 RSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDL 482 (968)
T ss_pred CCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEEC
Confidence 4677788888888888887788888888888888877777765443 666777777666666666544 3466666666
Q ss_pred ccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCccc
Q 040888 147 GSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGW 224 (495)
Q Consensus 147 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~ 224 (495)
++|++++.+|..+.++++|+.|+|++|+++|.+|..+.++++|++|+|++|.++|.+ ..+..++ |+.|++++|+++|.
T Consensus 483 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 562 (968)
T PLN00113 483 SRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGE 562 (968)
T ss_pred cCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCccccc
Confidence 666666666666666666666666666666666666666666666666666666655 4455555 66666666666666
Q ss_pred Cchhhhhcc-----cCCCCcCCCCCCCCCCCCCC-CCCC-CCCC------C---CCCCCCCCCcceeeEEE-eehHHHHH
Q 040888 225 VPEELKDIA-----KTGGNSWSSSPAPPPPPGTK-PVTK-RKAS------P---FREGDESSSSKIWQWVI-IAIAVLLA 287 (495)
Q Consensus 225 ~p~~l~~l~-----~~~~n~~~~~~~~~~~~~~~-~~~~-~~~~------~---~~~~~~~~~~~~~~~~i-i~i~vll~ 287 (495)
+|..+..+. .+.+|.+.+..+ ....... .... .++. + ............+..++ ++++++++
T Consensus 563 ~p~~l~~l~~L~~l~ls~N~l~~~~p-~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~ 641 (968)
T PLN00113 563 IPKNLGNVESLVQVNISHNHLHGSLP-STGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLV 641 (968)
T ss_pred CChhHhcCcccCEEeccCCcceeeCC-CcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHH
Confidence 666665544 233444432111 1100000 0000 0000 0 00000000111111111 11222222
Q ss_pred HHHHHHHHHHhhccCCCCC-CCcchhhhhhhccccCCcchhhhhcCCCCCCCCCCCccCCCCCCCCccCcccCCCCcCCC
Q 040888 288 LAIIAIVIALFSRRRSSPS-SHFLDEERASQRRAFTPLASQELTNDMAPESIKPFKGIDDYKGGQDYMGFHDYKSNQDHY 366 (495)
Q Consensus 288 l~~v~i~~~~~~~rr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (495)
+++++ ++++++++|+... ...+.. .
T Consensus 642 ~~~~~-~~~~~~~~~~~~~~~~~~~~-----------------------------~------------------------ 667 (968)
T PLN00113 642 LALVA-FGFVFIRGRNNLELKRVENE-----------------------------D------------------------ 667 (968)
T ss_pred HHHHH-HHHHHHHhhhcccccccccc-----------------------------c------------------------
Confidence 22222 2222222222110 000000 0
Q ss_pred CCCceeeeeeeccccccccccCCCCCCcccHHHHHHhccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccc
Q 040888 367 KGNLFVFWHLLEVNQFNNVKSTNAQAAPFSMADLLTATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRA 445 (495)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~ 445 (495)
.. |... .+ .......++++++.. .|...+.||+|+||.||+|+. .++..||||++.....
T Consensus 668 --~~---~~~~---~~-----~~~~~~~~~~~~~~~---~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--- 728 (968)
T PLN00113 668 --GT---WELQ---FF-----DSKVSKSITINDILS---SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--- 728 (968)
T ss_pred --cc---cccc---cc-----ccccchhhhHHHHHh---hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---
Confidence 00 0000 00 000112244555543 467788999999999999997 5789999999864321
Q ss_pred cHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCCHhhhhC
Q 040888 446 NSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 446 ~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~~~L~ 495 (495)
...+|++.+++++|||||+++|+|...+..++|||||++|+|.++++
T Consensus 729 ---~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~ 775 (968)
T PLN00113 729 ---IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR 775 (968)
T ss_pred ---ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh
Confidence 12346888999999999999999999999999999999999999874
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.94 E-value=2.7e-26 Score=260.28 Aligned_cols=206 Identities=35% Similarity=0.642 Sum_probs=151.5
Q ss_pred CChHHHHHHHHHHHcCCCCC-CCCCCCCCCCCCCCCCcccEEecC-CCEeEEEcCCCCCccccccccCCCCCCcEEECcC
Q 040888 25 TDSQDASALNVMYTSLHSPS-QLSNWKAGGGDPCGEHWKGITCSG-SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSN 102 (495)
Q Consensus 25 ~~~~~~~~L~~~~~~~~~~~-~l~~w~~~~~~~C~~~w~gv~c~~-~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~ 102 (495)
..+.|..+|++|++++.++. .+.+|+. ..++| .|.||.|+. ++|+.|+|++|+++|.++..|..+++|+.|||++
T Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~~~w~~-~~~~c--~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~ 102 (968)
T PLN00113 26 LHAEELELLLSFKSSINDPLKYLSNWNS-SADVC--LWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSN 102 (968)
T ss_pred CCHHHHHHHHHHHHhCCCCcccCCCCCC-CCCCC--cCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCC
Confidence 45689999999999997663 6789974 56788 899999974 6899999999999888888888888888888888
Q ss_pred CCCCCCCCCCCC---CCC----------------------cEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccch
Q 040888 103 NNLKDSIPYQLP---PNL----------------------KHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSD 157 (495)
Q Consensus 103 N~l~g~~p~~~~---~~L----------------------~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 157 (495)
|++.|.+|..+. ++| ++|+|++|.+++.+|..++++++|++|+|++|.+.+.+|.
T Consensus 103 n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 182 (968)
T PLN00113 103 NQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPN 182 (968)
T ss_pred CccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCCh
Confidence 888777775432 444 4555555555555666666677777777777777777777
Q ss_pred hhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcccCchhhhhcc
Q 040888 158 MFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 158 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
.+.++++|++|+|++|++++.+|..++++++|+.|+|++|++++.+ ..++.++ |+.|++++|.+++.+|..+.+++
T Consensus 183 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 260 (968)
T PLN00113 183 SLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLK 260 (968)
T ss_pred hhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCC
Confidence 7777777777777777777777777777777777777777777655 4455555 77777777777777777776655
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=7.5e-21 Score=189.79 Aligned_cols=103 Identities=43% Similarity=0.774 Sum_probs=94.0
Q ss_pred CCCcccHHHHHHhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEE
Q 040888 391 QAAPFSMADLLTATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVG 470 (495)
Q Consensus 391 ~~~~~~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g 470 (495)
....|++.++..||++|+..+.||+|+||.||+|.+++|+.||||++....... .++|.+|++++++++|||||+|+|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEE
Confidence 456799999999999999999999999999999999999999999887654321 467999999999999999999999
Q ss_pred EEEeCC-EEEEEEEecCCCCHhhhhC
Q 040888 471 FCSEQG-HNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 471 ~~~~~~-~~~lv~ey~~~GsL~~~L~ 495 (495)
||.+.+ +.+||||||+||+|.++||
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~ 164 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLH 164 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhC
Confidence 999988 5999999999999999986
No 4
>PLN03150 hypothetical protein; Provisional
Probab=99.74 E-value=1.3e-17 Score=178.61 Aligned_cols=151 Identities=27% Similarity=0.524 Sum_probs=97.7
Q ss_pred cCCChHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCC---CCcccEEecCC------CEeEEEcCCCCCccccccccCCCC
Q 040888 23 SKTDSQDASALNVMYTSLHSPSQLSNWKAGGGDPCG---EHWKGITCSGS------SVTEIKLSGLGLNGQLGYQLTNLK 93 (495)
Q Consensus 23 ~~~~~~~~~~L~~~~~~~~~~~~l~~w~~~~~~~C~---~~w~gv~c~~~------~v~~l~L~~n~l~g~~~~~~~~l~ 93 (495)
..+.+.|+.||+.+|.++..+.. .+|. +++|. +.|.||.|+.. .|+.|+|++|++.|.+|..+++++
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~-~~W~---g~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~ 442 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLR-FGWN---GDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLR 442 (623)
T ss_pred cccCchHHHHHHHHHHhcCCccc-CCCC---CCCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCC
Confidence 45678899999999999876532 4795 46773 36999999521 377788888888877777777777
Q ss_pred CCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCC
Q 040888 94 SVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKN 173 (495)
Q Consensus 94 ~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N 173 (495)
+|+.|+|++|.|.|.+| ..++.+++|+.|+|++|+|+|.+|+.++++++|+.|+|++|
T Consensus 443 ~L~~L~Ls~N~l~g~iP----------------------~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N 500 (623)
T PLN03150 443 HLQSINLSGNSIRGNIP----------------------PSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500 (623)
T ss_pred CCCEEECCCCcccCcCC----------------------hHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCC
Confidence 77766666666665554 44555555555555555555555555555555555555555
Q ss_pred cCCCcCcccccCC-CCCCEEeccCCcc
Q 040888 174 QLTGELPRSFASL-SSLKKLYLQNNQF 199 (495)
Q Consensus 174 ~l~g~~p~~~~~l-~~L~~L~l~~N~l 199 (495)
+|+|.+|..+..+ .++..+++.+|..
T Consensus 501 ~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 501 SLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred cccccCChHHhhccccCceEEecCCcc
Confidence 5555555555432 3445566666653
No 5
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.66 E-value=1.1e-18 Score=148.77 Aligned_cols=161 Identities=28% Similarity=0.473 Sum_probs=145.1
Q ss_pred CCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 68 GSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
.+.++.|.|+.|.++ .+|+.+..|.+|+.|++++|++. .+|.++. +.|++|+++-|++. ..|..|+.++.|++||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 357899999999998 56778999999999999999998 6777776 89999999999998 8999999999999999
Q ss_pred cccCcCCC-ccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcc
Q 040888 146 LGSNQLNG-QLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 146 L~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g 223 (495)
|..|+++. .+|..|..++.|..|.|+.|.|. .+|..++++++|+.|.+..|.+-..+..++.+. |++|.+.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnrl~- 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNRLT- 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccceee-
Confidence 99999964 67888999999999999999998 889999999999999999999987777888887 999999999998
Q ss_pred cCchhhhhcc
Q 040888 224 WVPEELKDIA 233 (495)
Q Consensus 224 ~~p~~l~~l~ 233 (495)
.+|++++++.
T Consensus 187 vlppel~~l~ 196 (264)
T KOG0617|consen 187 VLPPELANLD 196 (264)
T ss_pred ecChhhhhhh
Confidence 6788887765
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.66 E-value=2.2e-16 Score=151.86 Aligned_cols=92 Identities=20% Similarity=0.460 Sum_probs=81.6
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
..+|.....||+|+||+||+|+++ ++..||||.+..........+-...|+++|++++|||||+++++++.++..+|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 456777788999999999999984 5899999999877544444566889999999999999999999999999999999
Q ss_pred EecCCCCHhhhhC
Q 040888 483 DYYRNGSLHEFLH 495 (495)
Q Consensus 483 ey~~~GsL~~~L~ 495 (495)
|||.+|||.+|||
T Consensus 89 EyC~gGDLs~yi~ 101 (429)
T KOG0595|consen 89 EYCNGGDLSDYIR 101 (429)
T ss_pred EeCCCCCHHHHHH
Confidence 9999999999985
No 7
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.61 E-value=1.6e-15 Score=151.23 Aligned_cols=90 Identities=28% Similarity=0.494 Sum_probs=81.2
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.......+.||+|.||.|..|+...+..||||.++.+... ..+++|.+|+++|++++|||||+|+|.|..++..++|+|
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~-~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATK-NARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccch-hHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 3445567889999999999999988899999999987543 346899999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
||++|+|.+||
T Consensus 616 YmEnGDLnqFl 626 (807)
T KOG1094|consen 616 YMENGDLNQFL 626 (807)
T ss_pred HHhcCcHHHHH
Confidence 99999999987
No 8
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.61 E-value=6.8e-17 Score=161.02 Aligned_cols=170 Identities=26% Similarity=0.320 Sum_probs=147.9
Q ss_pred cEEecCCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCC
Q 040888 63 GITCSGSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSE 140 (495)
Q Consensus 63 gv~c~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~ 140 (495)
|+.-....+..|+|+.|+++..-...+.+|+.|+.||||+|.+...-+..+. ++|+.|||++|+|+..-+..|..|..
T Consensus 263 G~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~ 342 (873)
T KOG4194|consen 263 GAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQ 342 (873)
T ss_pred cceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHH
Confidence 4433345789999999999988888899999999999999999876665544 89999999999999888889999999
Q ss_pred CcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcc---cccCCCCCCEEeccCCcccccc-cccCCcc-CcEEE
Q 040888 141 LKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPR---SFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELN 215 (495)
Q Consensus 141 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~---~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~ 215 (495)
|+.|+|++|.++..-...|..+++|+.|||++|.|++.|-+ .|..|++|+.|+|.+|++.... ..+..++ |++||
T Consensus 343 Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~Ld 422 (873)
T KOG4194|consen 343 LEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLD 422 (873)
T ss_pred hhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceec
Confidence 99999999999988888899999999999999999987764 4778999999999999998777 6777777 99999
Q ss_pred eecCCCcccCchhhhhc
Q 040888 216 VENNKFSGWVPEELKDI 232 (495)
Q Consensus 216 l~~N~l~g~~p~~l~~l 232 (495)
|.+|.+-..-|..|..+
T Consensus 423 L~~NaiaSIq~nAFe~m 439 (873)
T KOG4194|consen 423 LGDNAIASIQPNAFEPM 439 (873)
T ss_pred CCCCcceeecccccccc
Confidence 99999988777766543
No 9
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.55 E-value=6.3e-16 Score=155.17 Aligned_cols=160 Identities=29% Similarity=0.447 Sum_probs=122.0
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC---CCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP---PNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~---~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
..++.|||+.|.|. ..|..+..-.++-+|+||+|++. .||-.+. ..|-+||||+|++. .+|+.+..|..|+.|.
T Consensus 103 ~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~ 179 (1255)
T KOG0444|consen 103 KDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLK 179 (1255)
T ss_pred ccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhh
Confidence 46788888888886 56777777778888888888886 6776665 55667888888887 6778888888888888
Q ss_pred cccCcCC-------------------------CccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCccc
Q 040888 146 LGSNQLN-------------------------GQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFT 200 (495)
Q Consensus 146 L~~N~l~-------------------------g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 200 (495)
|++|.+. ..+|..+..+.+|..+|||.|+|. .+|..+-++.+|+.|+|++|+++
T Consensus 180 Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it 258 (1255)
T KOG0444|consen 180 LSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT 258 (1255)
T ss_pred cCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee
Confidence 8888663 236777888888899999999998 88998989999999999999887
Q ss_pred ccccccCCcc-CcEEEeecCCCcccCchhhhhcc
Q 040888 201 GSINVLGKLP-LDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 201 g~~~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
..-...+... |+.|++|.|+|+ ..|+.+..++
T Consensus 259 eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~ 291 (1255)
T KOG0444|consen 259 ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLT 291 (1255)
T ss_pred eeeccHHHHhhhhhhccccchhc-cchHHHhhhH
Confidence 5433233333 778888888877 4666665554
No 10
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.55 E-value=2e-15 Score=157.75 Aligned_cols=90 Identities=29% Similarity=0.577 Sum_probs=78.0
Q ss_pred cCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
.+....+.||+|.||+||+|+.. +.+.||||.++.... .+..++|.+|++++++++|||||+|+|.|.+++..
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~-~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE-NQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc-HHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 34445678999999999999863 356899999987543 23468999999999999999999999999999999
Q ss_pred EEEEEecCCCCHhhhhC
Q 040888 479 ILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L~ 495 (495)
++|+|||..|||++||+
T Consensus 565 ~MvFEYm~~GDL~eFLr 581 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLR 581 (774)
T ss_pred EEEEEecccccHHHHHH
Confidence 99999999999999984
No 11
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.54 E-value=1.2e-14 Score=149.60 Aligned_cols=88 Identities=23% Similarity=0.437 Sum_probs=78.1
Q ss_pred CcccceeccCCceEEEEEEcC----CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP----DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
..+.++||.|.||.||+|.++ ....||||.|+.+... ..+++|+.|..+|++++||||++|.|+....+..++|.
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyte-kqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTE-KQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccH-HHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 345789999999999999984 2458999999877543 34779999999999999999999999999999999999
Q ss_pred EecCCCCHhhhhC
Q 040888 483 DYYRNGSLHEFLH 495 (495)
Q Consensus 483 ey~~~GsL~~~L~ 495 (495)
|||+||+|+.||+
T Consensus 710 EyMENGsLDsFLR 722 (996)
T KOG0196|consen 710 EYMENGSLDSFLR 722 (996)
T ss_pred hhhhCCcHHHHHh
Confidence 9999999999985
No 12
>PLN03150 hypothetical protein; Provisional
Probab=99.53 E-value=5.5e-14 Score=150.71 Aligned_cols=87 Identities=32% Similarity=0.587 Sum_probs=47.4
Q ss_pred CcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccC
Q 040888 117 LKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQN 196 (495)
Q Consensus 117 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 196 (495)
++.|+|++|.++|.+|..++.+++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+|+|.+|..++++++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 44455555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred Ccccccc
Q 040888 197 NQFTGSI 203 (495)
Q Consensus 197 N~l~g~~ 203 (495)
|+++|.+
T Consensus 500 N~l~g~i 506 (623)
T PLN03150 500 NSLSGRV 506 (623)
T ss_pred CcccccC
Confidence 5555444
No 13
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.50 E-value=9.4e-16 Score=130.87 Aligned_cols=143 Identities=36% Similarity=0.576 Sum_probs=129.3
Q ss_pred ccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCC
Q 040888 88 QLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKL 165 (495)
Q Consensus 88 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L 165 (495)
.+.+++.++.|.||+|+++ .+|+.+. .+|+.|++++|++. .+|.+++.+++|+.|+++-|++. .+|..|+.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 4667888999999999998 6777776 89999999999999 89999999999999999999998 789999999999
Q ss_pred cEEEccCCcCCC-cCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccCchhhhhccc
Q 040888 166 ETLDLSKNQLTG-ELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWVPEELKDIAK 234 (495)
Q Consensus 166 ~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l~~ 234 (495)
+.|||++|+++. .+|..|..+..|+.|+|+.|.|.-.++.++.++ |+.|.+.+|.+- ..|.+++.+..
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~ 174 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTR 174 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchh-hCcHHHHHHHH
Confidence 999999999975 589999999999999999999987778888888 999999999987 68888888773
No 14
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.50 E-value=2e-14 Score=143.30 Aligned_cols=86 Identities=29% Similarity=0.553 Sum_probs=77.8
Q ss_pred CcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecC
Q 040888 407 FATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
+...+.||+|.||.||.|.++....||||.+..... ..++|.+|+++|.+++|+|||+++|+|..++..+||+|||+
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m---~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM---SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEecccc---ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 344688999999999999998888999999987643 25789999999999999999999999999999999999999
Q ss_pred CCCHhhhhC
Q 040888 487 NGSLHEFLH 495 (495)
Q Consensus 487 ~GsL~~~L~ 495 (495)
+|+|.+||+
T Consensus 285 ~GsLl~yLr 293 (468)
T KOG0197|consen 285 KGSLLDYLR 293 (468)
T ss_pred cCcHHHHhh
Confidence 999999985
No 15
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.49 E-value=5.8e-14 Score=139.61 Aligned_cols=86 Identities=33% Similarity=0.621 Sum_probs=74.8
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC-EEEEEEEecCCC
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG-HNILIYDYYRNG 488 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv~ey~~~G 488 (495)
.+.+|+|+||+||+|.++....||||++..........++|.+|+.+|.+++|||||+++|+|.+.. ..++|+|||++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 4569999999999999966555999999865443323568999999999999999999999999887 789999999999
Q ss_pred CHhhhhC
Q 040888 489 SLHEFLH 495 (495)
Q Consensus 489 sL~~~L~ 495 (495)
+|.++||
T Consensus 126 sL~~~l~ 132 (362)
T KOG0192|consen 126 SLSVLLH 132 (362)
T ss_pred cHHHHHh
Confidence 9999885
No 16
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.48 E-value=2.7e-14 Score=142.69 Aligned_cols=167 Identities=26% Similarity=0.348 Sum_probs=120.9
Q ss_pred CCCCCCcccEEecC----------------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CC
Q 040888 55 DPCGEHWKGITCSG----------------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PN 116 (495)
Q Consensus 55 ~~C~~~w~gv~c~~----------------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~ 116 (495)
.+|.|.-.-..|+. ..++.|+|++|.|+..-+..|-++++|+.++|.+|.++ .||.... .+
T Consensus 48 a~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sgh 126 (873)
T KOG4194|consen 48 ATCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGH 126 (873)
T ss_pred CcCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccc
Confidence 44555555666754 23667999999999999999999999999999999998 6775443 46
Q ss_pred CcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccC
Q 040888 117 LKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQN 196 (495)
Q Consensus 117 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 196 (495)
|+.|+|.+|.|+..-..++.-++.|+.||||.|.|+..--..|..-.++++|+|++|.++..--..|.++.+|..|.|++
T Consensus 127 l~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsr 206 (873)
T KOG4194|consen 127 LEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSR 206 (873)
T ss_pred eeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeeccc
Confidence 77888887777766666777777777777777777754445565556677777777777766666677777777777777
Q ss_pred Ccccccc-cccCCcc-CcEEEeecCCCc
Q 040888 197 NQFTGSI-NVLGKLP-LDELNVENNKFS 222 (495)
Q Consensus 197 N~l~g~~-~~~~~~~-L~~l~l~~N~l~ 222 (495)
|+++..+ ..+..++ |+.|+|..|++.
T Consensus 207 NrittLp~r~Fk~L~~L~~LdLnrN~ir 234 (873)
T KOG4194|consen 207 NRITTLPQRSFKRLPKLESLDLNRNRIR 234 (873)
T ss_pred CcccccCHHHhhhcchhhhhhcccccee
Confidence 7777655 5555566 777777766653
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.48 E-value=4.8e-13 Score=144.48 Aligned_cols=171 Identities=25% Similarity=0.400 Sum_probs=99.1
Q ss_pred hhhccccCCChHHHHHHHHHHHcCCCCCCCCC----CCCCCCCCCCC--------------CcccEEecCCCEe------
Q 040888 17 FSCHVLSKTDSQDASALNVMYTSLHSPSQLSN----WKAGGGDPCGE--------------HWKGITCSGSSVT------ 72 (495)
Q Consensus 17 ~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~----w~~~~~~~C~~--------------~w~gv~c~~~~v~------ 72 (495)
-.|+....+.+.+...+.++.+.+..|+.+.+ |.. ..+.|.- .-.-|.|.+..|+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~-~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g 130 (754)
T PRK15370 52 YLCHPPETASPEEIKSKFECLRMLAFPAYADNIQYSRGG-ADQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTE 130 (754)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHhcCCchhhccccccCC-CCcccccCCcchhhheeeecCCceEEecCCCccccccccc
Confidence 45677788889999999999999999876655 864 4567731 1112667544444
Q ss_pred ---------------------------------------------------EEEcCCCCCccccccccCCCCCCcEEECc
Q 040888 73 ---------------------------------------------------EIKLSGLGLNGQLGYQLTNLKSVSYLDVS 101 (495)
Q Consensus 73 ---------------------------------------------------~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls 101 (495)
.|+|++++++. +|..+. ++|+.|+|+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls 207 (754)
T PRK15370 131 SEQASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTT-IPACIP--EQITTLILD 207 (754)
T ss_pred ccccccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCc-CCcccc--cCCcEEEec
Confidence 45555555542 333222 345666666
Q ss_pred CCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcc
Q 040888 102 NNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPR 181 (495)
Q Consensus 102 ~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 181 (495)
+|+|+ .+|..+.++|+.|+|++|+|+ .+|..+. .+|+.|+|++|++. .+|..+. .+|+.|+|++|+|+ .+|.
T Consensus 208 ~N~Lt-sLP~~l~~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~ 279 (754)
T PRK15370 208 NNELK-SLPENLQGNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPE 279 (754)
T ss_pred CCCCC-cCChhhccCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-cccc
Confidence 66665 345545556666666666665 3444332 34566666666655 4444443 35666666666665 3454
Q ss_pred cccCCCCCCEEeccCCcccc
Q 040888 182 SFASLSSLKKLYLQNNQFTG 201 (495)
Q Consensus 182 ~~~~l~~L~~L~l~~N~l~g 201 (495)
.+. ++|+.|+|++|+|++
T Consensus 280 ~l~--~sL~~L~Ls~N~Lt~ 297 (754)
T PRK15370 280 NLP--EELRYLSVYDNSIRT 297 (754)
T ss_pred ccC--CCCcEEECCCCcccc
Confidence 443 356666666666554
No 18
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.44 E-value=2e-14 Score=137.68 Aligned_cols=190 Identities=22% Similarity=0.305 Sum_probs=131.2
Q ss_pred CCCCCCCCc---ccEEecCC-----------CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CC
Q 040888 53 GGDPCGEHW---KGITCSGS-----------SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PN 116 (495)
Q Consensus 53 ~~~~C~~~w---~gv~c~~~-----------~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~ 116 (495)
.+.||.|+- .-|.|+.. ..++|+|..|+++...+..|+.+.+|++||||+|+|+..-|..|. ++
T Consensus 37 CP~pC~Cs~~~g~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~ 116 (498)
T KOG4237|consen 37 CPAPCTCSDVEGGIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLAS 116 (498)
T ss_pred CCCCcccCCCCCceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHh
Confidence 345676655 44788752 578899999999999999999999999999999999977776664 33
Q ss_pred CcE-EECcCCcCCCCcchhccC------------------------CCCC------------------------cEEEcc
Q 040888 117 LKH-LDLSENQFSGTVPYSISQ------------------------MSEL------------------------KYLNLG 147 (495)
Q Consensus 117 L~~-L~Ls~N~l~g~~p~~~~~------------------------l~~L------------------------~~L~L~ 147 (495)
|.. +++++|+|+......|++ |++| +.+.+.
T Consensus 117 l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA 196 (498)
T KOG4237|consen 117 LLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLA 196 (498)
T ss_pred hhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhh
Confidence 333 333446655322222222 2333 333333
Q ss_pred cCcCC-------------------------------------------------------------Cccc-hhhhCCCCC
Q 040888 148 SNQLN-------------------------------------------------------------GQLS-DMFQKNEKL 165 (495)
Q Consensus 148 ~N~l~-------------------------------------------------------------g~~p-~~~~~l~~L 165 (495)
.|.+- +.-| ..|..+++|
T Consensus 197 ~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L 276 (498)
T KOG4237|consen 197 QNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNL 276 (498)
T ss_pred cCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccc
Confidence 33210 0111 246677888
Q ss_pred cEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcccCchhhhhcc-----cCCCC
Q 040888 166 ETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGWVPEELKDIA-----KTGGN 238 (495)
Q Consensus 166 ~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l~-----~~~~n 238 (495)
+.|+|++|.+++.-+.+|..+..++.|+|..|++.-.- ..+..+. |+.|+|.+|+++...|..|..+. .+..|
T Consensus 277 ~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~N 356 (498)
T KOG4237|consen 277 RKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSN 356 (498)
T ss_pred eEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccC
Confidence 99999999999888888888899999999999887544 4566666 88999999999988887776554 34456
Q ss_pred cCCC
Q 040888 239 SWSS 242 (495)
Q Consensus 239 ~~~~ 242 (495)
+|+|
T Consensus 357 p~~C 360 (498)
T KOG4237|consen 357 PFNC 360 (498)
T ss_pred cccC
Confidence 6664
No 19
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.43 E-value=1.9e-13 Score=138.29 Aligned_cols=97 Identities=24% Similarity=0.489 Sum_probs=80.0
Q ss_pred HHHHhccCCcccceeccCCceEEEEEEcC--CC--CE-EEEEEecCcc-cccccHHHHHHHHHHHhcCCCCCcceEEEEE
Q 040888 399 DLLTATANFATGRLLGEGTIGRVYRAKYP--DG--KV-LAVKKIDSSH-FQRANSESFSEIVQNISRIRHTNIAELVGFC 472 (495)
Q Consensus 399 ~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~--~g--~~-vavK~l~~~~-~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~ 472 (495)
.++-..++....+.||+|+||.||+|.+. ++ .. ||||...... ......++|.+|.++|+.++|||||+++|++
T Consensus 151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa 230 (474)
T KOG0194|consen 151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA 230 (474)
T ss_pred ccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 33444455556699999999999999984 23 23 8999987532 3334568899999999999999999999999
Q ss_pred EeCCEEEEEEEecCCCCHhhhhC
Q 040888 473 SEQGHNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 473 ~~~~~~~lv~ey~~~GsL~~~L~ 495 (495)
..+.+.++|||+|.||+|.+||+
T Consensus 231 ~~~~Pl~ivmEl~~gGsL~~~L~ 253 (474)
T KOG0194|consen 231 VLEEPLMLVMELCNGGSLDDYLK 253 (474)
T ss_pred cCCCccEEEEEecCCCcHHHHHH
Confidence 99999999999999999999984
No 20
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.41 E-value=4.8e-13 Score=129.01 Aligned_cols=90 Identities=20% Similarity=0.384 Sum_probs=76.1
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccc-----cHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRA-----NSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~-----~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
+.|...+.+|+|+||.|-+|.- ++|+.||||.+.+...... ......+|+++|.++.|||||++++++...+..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 3456678999999999999987 5799999999986543221 122346999999999999999999999999999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
|+|+|||++|+|++++
T Consensus 252 YmVlE~v~GGeLfd~v 267 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKV 267 (475)
T ss_pred EEEEEEecCccHHHHH
Confidence 9999999999999875
No 21
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.40 E-value=4e-13 Score=132.59 Aligned_cols=89 Identities=27% Similarity=0.484 Sum_probs=75.5
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHNILI 481 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv 481 (495)
+.|.....||+|.||.||||+. .+|+.||+|+++.+....+......+||.+|++++||||++|.+...+. ..+|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 3466678899999999999986 6799999999988765444456678999999999999999999999876 689999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
+|||++ ||..++
T Consensus 197 FeYMdh-DL~GLl 208 (560)
T KOG0600|consen 197 FEYMDH-DLSGLL 208 (560)
T ss_pred Eecccc-hhhhhh
Confidence 999986 776554
No 22
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.40 E-value=5.8e-13 Score=143.18 Aligned_cols=109 Identities=33% Similarity=0.384 Sum_probs=55.5
Q ss_pred CCCcEEECcCCcCCCCcchhccC-----------------CCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCC
Q 040888 115 PNLKHLDLSENQFSGTVPYSISQ-----------------MSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTG 177 (495)
Q Consensus 115 ~~L~~L~Ls~N~l~g~~p~~~~~-----------------l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 177 (495)
.+|++|+|++|+|++ +|....+ ..+|+.|+|++|+|++ +|.. .++|+.|++++|+|++
T Consensus 342 ~~Lq~LdLS~N~Ls~-LP~lp~~L~~L~Ls~N~L~~LP~l~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss 416 (788)
T PRK15387 342 SGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS 416 (788)
T ss_pred cccceEecCCCccCC-CCCCCcccceehhhccccccCcccccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC
Confidence 467777777777763 4432111 1234444444444442 2321 1345555555555542
Q ss_pred cCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccCchhhhhc
Q 040888 178 ELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWVPEELKDI 232 (495)
Q Consensus 178 ~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l 232 (495)
+|... .+|+.|+|++|+|+..+..+..++ |+.|+|++|+|+|.+|..+..+
T Consensus 417 -IP~l~---~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 417 -LPMLP---SGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred -CCcch---hhhhhhhhccCcccccChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 34321 244555556666554333444444 6677777777777666666544
No 23
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.40 E-value=2.4e-14 Score=143.90 Aligned_cols=150 Identities=26% Similarity=0.413 Sum_probs=100.8
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCC-CCcchhccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFS-GTVPYSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~ 145 (495)
++++-|.|...+|. .+|.+++.|..|++|.+++|++.. +-.++. +.|+.+++..|++. .-||..+..|..|+.||
T Consensus 32 t~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~-vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lD 109 (1255)
T KOG0444|consen 32 TQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS-VHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILD 109 (1255)
T ss_pred hheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh-hhhhhccchhhHHHhhhccccccCCCCchhcccccceeee
Confidence 45666666666654 567777777777777777777652 222233 66777777777774 23666777777777777
Q ss_pred cccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcc-cccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCc
Q 040888 146 LGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPR-SFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFS 222 (495)
Q Consensus 146 L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~ 222 (495)
||+|++. ..|..+..-.++..|+||+|+|. .||. -|.+|..|-.|||++|++...++.+..+. |+.|+|++|+|.
T Consensus 110 LShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~ 186 (1255)
T KOG0444|consen 110 LSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLN 186 (1255)
T ss_pred cchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhh
Confidence 7777776 56666777777777777777776 4443 45667777777777777776666655555 777777777665
No 24
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.38 E-value=2.1e-13 Score=122.69 Aligned_cols=92 Identities=28% Similarity=0.438 Sum_probs=81.0
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.++|+.++.||+|.||.||.|..+ ++-.||+|++.+..... ...+++.+|+++-+.++||||.++++|+.++...||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 467888999999999999999984 57899999998765432 3367899999999999999999999999999999999
Q ss_pred EEecCCCCHhhhhC
Q 040888 482 YDYYRNGSLHEFLH 495 (495)
Q Consensus 482 ~ey~~~GsL~~~L~ 495 (495)
+||.++|++...|+
T Consensus 101 lEya~~gel~k~L~ 114 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQ 114 (281)
T ss_pred EEecCCchHHHHHH
Confidence 99999999988763
No 25
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.37 E-value=1.4e-12 Score=140.93 Aligned_cols=147 Identities=28% Similarity=0.451 Sum_probs=85.1
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccC
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSN 149 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 149 (495)
+++.|+|++|.|+. +|..+. .+|+.|+|++|++. .+|..++.+|+.|+|++|+|+ .+|..+. .+|+.|+|++|
T Consensus 221 nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~Ls~N~L~-~LP~~l~s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N 293 (754)
T PRK15370 221 NIKTLYANSNQLTS-IPATLP--DTIQEMELSINRIT-ELPERLPSALQSLDLFHNKIS-CLPENLP--EELRYLSVYDN 293 (754)
T ss_pred CCCEEECCCCcccc-CChhhh--ccccEEECcCCccC-cCChhHhCCCCEEECcCCccC-ccccccC--CCCcEEECCCC
Confidence 57788888888773 454432 35666666666665 556555566666666666666 3454442 35666666666
Q ss_pred cCCCccchhhh-------------------CCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc
Q 040888 150 QLNGQLSDMFQ-------------------KNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP 210 (495)
Q Consensus 150 ~l~g~~p~~~~-------------------~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~ 210 (495)
+|++ +|..+. -.++|+.|++++|.|++ +|..+. ++|+.|+|++|+|+..+..+. ..
T Consensus 294 ~Lt~-LP~~lp~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~LP~~lp-~~ 368 (754)
T PRK15370 294 SIRT-LPAHLPSGITHLNVQSNSLTALPETLPPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITVLPETLP-PT 368 (754)
T ss_pred cccc-CcccchhhHHHHHhcCCccccCCccccccceeccccCCcccc-CChhhc--CcccEEECCCCCCCcCChhhc-CC
Confidence 6653 222111 11356666666666663 455443 567777777777764332221 13
Q ss_pred CcEEEeecCCCcccCchhh
Q 040888 211 LDELNVENNKFSGWVPEEL 229 (495)
Q Consensus 211 L~~l~l~~N~l~g~~p~~l 229 (495)
|+.|++++|.|+. +|..+
T Consensus 369 L~~LdLs~N~Lt~-LP~~l 386 (754)
T PRK15370 369 ITTLDVSRNALTN-LPENL 386 (754)
T ss_pred cCEEECCCCcCCC-CCHhH
Confidence 7777777777773 44443
No 26
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.35 E-value=3.9e-13 Score=135.15 Aligned_cols=95 Identities=22% Similarity=0.459 Sum_probs=83.0
Q ss_pred HHHHHhccCCcccceeccCCceEEEEEEcCC-CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC
Q 040888 398 ADLLTATANFATGRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG 476 (495)
Q Consensus 398 ~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (495)
++++....+....++||-|.||.||.|+++. .-.||||.++.+.+. .++|+.|..+|..++|||+|+|+|+|..+.
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe---veEFLkEAAvMKeikHpNLVqLLGVCT~Ep 336 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTHEP 336 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh---HHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence 4444445566678999999999999999954 678999999877543 579999999999999999999999999999
Q ss_pred EEEEEEEecCCCCHhhhhC
Q 040888 477 HNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L~ 495 (495)
..|+|.|||.+|+|.+||+
T Consensus 337 PFYIiTEfM~yGNLLdYLR 355 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLR 355 (1157)
T ss_pred CeEEEEecccCccHHHHHH
Confidence 9999999999999999985
No 27
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.33 E-value=1.8e-12 Score=118.44 Aligned_cols=88 Identities=25% Similarity=0.450 Sum_probs=76.1
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
.|...+.+|+|.||.||+|.. .+|+.||||+++.....++......+||+.|+.++|+||+.|++++-..+..-+|+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 355678899999999999997 5799999999988765444456788999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
|+. ||...+
T Consensus 83 m~t-dLe~vI 91 (318)
T KOG0659|consen 83 MPT-DLEVVI 91 (318)
T ss_pred ccc-cHHHHh
Confidence 986 776654
No 28
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31 E-value=5.9e-12 Score=127.30 Aligned_cols=91 Identities=25% Similarity=0.503 Sum_probs=80.5
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
..|...+.||+|+|+.||+++. ..|..||+|++.+..... ...+...+||++.++++|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 3577889999999999999998 789999999998754432 23567899999999999999999999999999999999
Q ss_pred EecCCCCHhhhhC
Q 040888 483 DYYRNGSLHEFLH 495 (495)
Q Consensus 483 ey~~~GsL~~~L~ 495 (495)
|+|++|+|.++++
T Consensus 98 ELC~~~sL~el~K 110 (592)
T KOG0575|consen 98 ELCHRGSLMELLK 110 (592)
T ss_pred EecCCccHHHHHH
Confidence 9999999988763
No 29
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.31 E-value=2.4e-12 Score=139.57 Aligned_cols=89 Identities=31% Similarity=0.617 Sum_probs=76.6
Q ss_pred CCcccceeccCCceEEEEEEcCC--CC----EEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPD--GK----VLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~--g~----~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
+....+.||+|.||.||+|.+.+ |. .||||.+..... .+...+|.+|..+|++++|||||+++|.|.+....+
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~-~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS-EQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 34456889999999999999843 33 589999986533 234678999999999999999999999999999999
Q ss_pred EEEEecCCCCHhhhhC
Q 040888 480 LIYDYYRNGSLHEFLH 495 (495)
Q Consensus 480 lv~ey~~~GsL~~~L~ 495 (495)
+++|||++|||..||+
T Consensus 772 i~leyM~gGDL~sflr 787 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLR 787 (1025)
T ss_pred EEehhcccCcHHHHHH
Confidence 9999999999999985
No 30
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.31 E-value=5.2e-12 Score=120.83 Aligned_cols=85 Identities=25% Similarity=0.373 Sum_probs=74.6
Q ss_pred ccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC-EEEEEEEecC
Q 040888 409 TGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG-HNILIYDYYR 486 (495)
Q Consensus 409 ~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv~ey~~ 486 (495)
..+.||+|..|+|||+.+ ++++.+|+|++.... +....++..+|++++.+.+||+||.++|.|..+. +..++||||+
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~-~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD 161 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNI-DPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD 161 (364)
T ss_pred hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccC-CHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence 358899999999999999 568999999995432 2334678999999999999999999999999988 5999999999
Q ss_pred CCCHhhhh
Q 040888 487 NGSLHEFL 494 (495)
Q Consensus 487 ~GsL~~~L 494 (495)
+|||++++
T Consensus 162 gGSLd~~~ 169 (364)
T KOG0581|consen 162 GGSLDDIL 169 (364)
T ss_pred CCCHHHHH
Confidence 99999875
No 31
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.30 E-value=1.9e-11 Score=131.69 Aligned_cols=54 Identities=30% Similarity=0.457 Sum_probs=34.3
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCC
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFS 128 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~ 128 (495)
.+++.|+|.+|+|+. +|. .+++|++|+|++|+|+ .+|. ++++|+.|+|++|.|+
T Consensus 222 ~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~-lp~sL~~L~Ls~N~L~ 275 (788)
T PRK15387 222 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV-LPPGLLELSIFSNPLT 275 (788)
T ss_pred cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccC-cccccceeeccCCchh
Confidence 357888888888875 443 2477888888888887 3453 2344444444444443
No 32
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.27 E-value=1.8e-12 Score=120.42 Aligned_cols=87 Identities=21% Similarity=0.399 Sum_probs=72.5
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
.|+..-.+|+|+||.||||+.+ +|+.||||+.-.........+--++|+++|.+++|+|||.|+.+|......+||+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 4555678999999999999985 599999999976543223345678999999999999999999999999999999999
Q ss_pred cCCCCHhh
Q 040888 485 YRNGSLHE 492 (495)
Q Consensus 485 ~~~GsL~~ 492 (495)
++.-=|++
T Consensus 83 ~dhTvL~e 90 (396)
T KOG0593|consen 83 CDHTVLHE 90 (396)
T ss_pred cchHHHHH
Confidence 98754443
No 33
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.25 E-value=9.5e-12 Score=118.98 Aligned_cols=92 Identities=22% Similarity=0.415 Sum_probs=80.7
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.++|+..++||+|+||+||.++.. +++.+|+|++++..... ...+...+|..+|.+++||.||++.-.+.+.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 457888999999999999999874 59999999998765432 2356788999999999999999999999999999999
Q ss_pred EEecCCCCHhhhhC
Q 040888 482 YDYYRNGSLHEFLH 495 (495)
Q Consensus 482 ~ey~~~GsL~~~L~ 495 (495)
+||+.||+|+.+|+
T Consensus 104 ld~~~GGeLf~hL~ 117 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQ 117 (357)
T ss_pred EeccCCccHHHHHH
Confidence 99999999998874
No 34
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.25 E-value=1.8e-11 Score=125.13 Aligned_cols=91 Identities=25% Similarity=0.476 Sum_probs=76.3
Q ss_pred ccCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCC
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSEQG 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~ 476 (495)
.+.|...+.||+|+||.||+|+.. .+..||||++..... ....+.|.+|++++.+++ |||||+++++|...+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR-SSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 456777899999999999999852 134799999975432 223467999999999996 999999999999999
Q ss_pred EEEEEEEecCCCCHhhhhC
Q 040888 477 HNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L~ 495 (495)
..++||||+++|+|.++|+
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~ 133 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLH 133 (400)
T ss_pred ceEEEEEecCCCcHHHHHH
Confidence 9999999999999998874
No 35
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.25 E-value=1.2e-13 Score=132.65 Aligned_cols=158 Identities=27% Similarity=0.413 Sum_probs=114.7
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC-CCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP-PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+..++..+|+++ .+|+.++++.+|..|++.+|++....|..+. ..|++||...|-++ .+|+.++.+.+|.-|+|..
T Consensus 138 ~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~ 215 (565)
T KOG0472|consen 138 DLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRR 215 (565)
T ss_pred hhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhh
Confidence 4666777788876 5677788888999999999998855554444 78888888888887 7888888888888888888
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCccccc-CCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccCc
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFA-SLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWVP 226 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~p 226 (495)
|++. .+| +|+++..|..|+++.|++. .+|.+.. ++++|..|||..|+++..+..+..+. |+.||+|+|.+++ .|
T Consensus 216 Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is~-Lp 291 (565)
T KOG0472|consen 216 NKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDISS-LP 291 (565)
T ss_pred cccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCcccc-CC
Confidence 8887 445 5677777777777777776 5555544 67777777777777776665555555 6777777777764 45
Q ss_pred hhhhhcc
Q 040888 227 EELKDIA 233 (495)
Q Consensus 227 ~~l~~l~ 233 (495)
.+++++.
T Consensus 292 ~sLgnlh 298 (565)
T KOG0472|consen 292 YSLGNLH 298 (565)
T ss_pred cccccce
Confidence 5555543
No 36
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.24 E-value=4.1e-12 Score=126.93 Aligned_cols=89 Identities=25% Similarity=0.441 Sum_probs=78.3
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||||+.+ +.+.||+|.+.+........+...+|++++++++|||||.++++|......++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 35666788999999999999985 58899999998876555556778999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+.+ +|+.+|
T Consensus 82 ~a~g-~L~~il 91 (808)
T KOG0597|consen 82 YAVG-DLFTIL 91 (808)
T ss_pred hhhh-hHHHHH
Confidence 9976 999876
No 37
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.24 E-value=1.7e-13 Score=136.84 Aligned_cols=133 Identities=28% Similarity=0.437 Sum_probs=62.1
Q ss_pred cccccCCCCCCcEEECcCCCCCCCCCCCCC-CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCC
Q 040888 85 LGYQLTNLKSVSYLDVSNNNLKDSIPYQLP-PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNE 163 (495)
Q Consensus 85 ~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~ 163 (495)
+|..+++|..|++|||+.|+++ .+|..+. --|+.|-+++|+++ .+|..++.+..|..|+.+.|.+. .+|..++.+.
T Consensus 113 ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lpLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~ 189 (722)
T KOG0532|consen 113 IPEAICNLEALTFLDLSSNQLS-HLPDGLCDLPLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLT 189 (722)
T ss_pred cchhhhhhhHHHHhhhccchhh-cCChhhhcCcceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHH
Confidence 3444444555555555555544 2332222 34445555555544 44444444445555555555544 3444444455
Q ss_pred CCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCc
Q 040888 164 KLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFS 222 (495)
Q Consensus 164 ~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~ 222 (495)
+|+.|++..|++. .+|..+..| .|..||++.|+++-.+-.+..+. |++|-|.+|.|.
T Consensus 190 slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 190 SLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred HHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCceeecchhhhhhhhheeeeeccCCCC
Confidence 5555555555544 334444433 34455555555544443344443 555555555554
No 38
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.23 E-value=2.6e-11 Score=120.91 Aligned_cols=92 Identities=18% Similarity=0.324 Sum_probs=80.8
Q ss_pred hccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
..++|+....||+|+||.||.|+-+ +|..+|+|+|++..+.. ...+...+|-.+|...++|.||+|+-.|.+.+..||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4678999999999999999999874 59999999998875432 235668899999999999999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+||||+..+|
T Consensus 219 iMEylPGGD~mTLL 232 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLL 232 (550)
T ss_pred EEEecCCccHHHHH
Confidence 99999999998765
No 39
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.23 E-value=6.5e-13 Score=127.57 Aligned_cols=148 Identities=32% Similarity=0.466 Sum_probs=91.2
Q ss_pred EeEEEcCCCCCccccccccCCCCCCcE-EECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcc
Q 040888 71 VTEIKLSGLGLNGQLGYQLTNLKSVSY-LDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 71 v~~l~L~~n~l~g~~~~~~~~l~~L~~-L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
|+.++++.|++. ++|..+..+..+.+ +++++|.+ +-+|..+. ++|+.|+|++|-+. .+|.+++.+..|+.|+++
T Consensus 390 Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS 466 (565)
T KOG0472|consen 390 VTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLS 466 (565)
T ss_pred eEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheeccc
Confidence 777888887775 34544444444333 33333333 24444333 56666777666665 566666666667777777
Q ss_pred cCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCc
Q 040888 148 SNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFS 222 (495)
Q Consensus 148 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~ 222 (495)
+|+|. .+|..+..+..|+.+-.++|++....|..+.++.+|+.|||.+|.+...++.++++. |++|++.+|+|.
T Consensus 467 ~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 467 FNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 77665 556655555556666666666654444446777777777777777766666666666 777777777766
No 40
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.22 E-value=1.6e-11 Score=124.54 Aligned_cols=91 Identities=29% Similarity=0.504 Sum_probs=76.4
Q ss_pred ccCCcccceeccCCceEEEEEEc------CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCC
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY------PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQG 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~ 476 (495)
.++|...+.||+|+||.||+|+. .++..||||+++..... ...+.+.+|++++..+ +|||||+++++|...+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc-HHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 44677789999999999999963 24668999999754321 2346789999999999 8999999999999999
Q ss_pred EEEEEEEecCCCCHhhhhC
Q 040888 477 HNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L~ 495 (495)
..++||||+++|+|.++++
T Consensus 113 ~~~lv~E~~~~g~L~~~l~ 131 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLR 131 (375)
T ss_pred cceeeehhccCCcHHHHHH
Confidence 9999999999999998873
No 41
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.22 E-value=2.9e-11 Score=116.55 Aligned_cols=89 Identities=21% Similarity=0.418 Sum_probs=76.0
Q ss_pred cCCcccceeccCCceEEEEEEcC----CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP----DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
++|+..+.||+|+||.||+|.+. .+..||+|.++.... ....+.|.+|+..+.+++||||++++|++..++..++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 45677899999999999999863 356899999976432 2234679999999999999999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 84 v~e~~~~~~L~~~l 97 (266)
T cd05064 84 VTEYMSNGALDSFL 97 (266)
T ss_pred EEEeCCCCcHHHHH
Confidence 99999999999876
No 42
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.22 E-value=9.4e-12 Score=117.17 Aligned_cols=90 Identities=21% Similarity=0.344 Sum_probs=74.0
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHNIL 480 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~l 480 (495)
.++|...+.|++|.||.||+|+. +++..||+|+++.+....+..-.-.+||.+|.+++|||||.+..+.... +..|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 45677789999999999999998 4689999999987654333334568999999999999999998888653 56999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
|||||+. ||...+
T Consensus 155 VMe~~Eh-DLksl~ 167 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLM 167 (419)
T ss_pred eHHHHHh-hHHHHH
Confidence 9999986 777665
No 43
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.21 E-value=4.6e-11 Score=117.51 Aligned_cols=89 Identities=28% Similarity=0.492 Sum_probs=74.8
Q ss_pred cCCcccceeccCCceEEEEEEcCC-----------------CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcce
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD-----------------GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAE 467 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~-----------------g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~ 467 (495)
++|...+.||+|+||.||+|..++ +..||+|.+..... .....+|.+|++++.+++||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN-KNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCeeE
Confidence 356677899999999999997532 34799999875432 223567999999999999999999
Q ss_pred EEEEEEeCCEEEEEEEecCCCCHhhhh
Q 040888 468 LVGFCSEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 468 l~g~~~~~~~~~lv~ey~~~GsL~~~L 494 (495)
++++|...+..++||||+++|+|.+++
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l 110 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFL 110 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHH
Confidence 999999999999999999999998876
No 44
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.21 E-value=6.5e-13 Score=122.12 Aligned_cols=90 Identities=21% Similarity=0.426 Sum_probs=76.4
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEE-EEEeCCE-EEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVG-FCSEQGH-NILI 481 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g-~~~~~~~-~~lv 481 (495)
.+|...++||+|+||.|||+.. .+|..||.|.++-+.......++...|+.+|++++|||||+.++ .+.++.+ ..+|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 4566678999999999999975 78999999999866555555778999999999999999999988 4445544 7899
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+..|||.+.+
T Consensus 99 mE~c~~GDLsqmI 111 (375)
T KOG0591|consen 99 MELCDAGDLSQMI 111 (375)
T ss_pred HHhhcccCHHHHH
Confidence 9999999998875
No 45
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.20 E-value=4.6e-11 Score=121.57 Aligned_cols=89 Identities=17% Similarity=0.235 Sum_probs=76.8
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.|...+.||+|+||+||+|+. .+++.||+|++...... ....+.+.+|++++.+++|+|||++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 467789999999999999987 46889999999754321 2234578999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 82 ~~~gg~L~~~l 92 (381)
T cd05626 82 YIPGGDMMSLL 92 (381)
T ss_pred cCCCCcHHHHH
Confidence 99999998876
No 46
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.20 E-value=5e-12 Score=125.24 Aligned_cols=113 Identities=28% Similarity=0.390 Sum_probs=48.5
Q ss_pred ccCCCCCCcEEECcCCCCCCCCCCCCC-----CCCcEEECcCCcCCC----CcchhccCC-CCCcEEEcccCcCCCc---
Q 040888 88 QLTNLKSVSYLDVSNNNLKDSIPYQLP-----PNLKHLDLSENQFSG----TVPYSISQM-SELKYLNLGSNQLNGQ--- 154 (495)
Q Consensus 88 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~-----~~L~~L~Ls~N~l~g----~~p~~~~~l-~~L~~L~L~~N~l~g~--- 154 (495)
.+..+++|+.|+|++|.+.+..+..+. ++|++|++++|++++ .+...+..+ ++|+.|+|++|.+++.
T Consensus 76 ~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 155 (319)
T cd00116 76 GLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE 155 (319)
T ss_pred HHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH
Confidence 344444555555555554432222111 125555555555442 122233333 4555555555555421
Q ss_pred -cchhhhCCCCCcEEEccCCcCCCc----CcccccCCCCCCEEeccCCccc
Q 040888 155 -LSDMFQKNEKLETLDLSKNQLTGE----LPRSFASLSSLKKLYLQNNQFT 200 (495)
Q Consensus 155 -~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~ 200 (495)
++..+..+.+|+.|++++|.+++. ++..+..+++|+.|+|++|.++
T Consensus 156 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 206 (319)
T cd00116 156 ALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLT 206 (319)
T ss_pred HHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccC
Confidence 222333444455555555555421 2222333345555555555544
No 47
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.19 E-value=5.8e-11 Score=120.66 Aligned_cols=90 Identities=19% Similarity=0.280 Sum_probs=77.0
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||++.. .+++.||||++...... ....+.+.+|++++.+++|||||++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3677789999999999999987 46899999998654221 122456889999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 E~~~gg~L~~~l 92 (377)
T cd05629 81 EFLPGGDLMTML 92 (377)
T ss_pred eCCCCCcHHHHH
Confidence 999999998876
No 48
>PHA02988 hypothetical protein; Provisional
Probab=99.19 E-value=1.2e-10 Score=113.58 Aligned_cols=96 Identities=22% Similarity=0.343 Sum_probs=76.7
Q ss_pred cccHHHHHHhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccc-cHHHHHHHHHHHhcCCCCCcceEEEEE
Q 040888 394 PFSMADLLTATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRA-NSESFSEIVQNISRIRHTNIAELVGFC 472 (495)
Q Consensus 394 ~~~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~-~~~~f~~e~~~l~~l~H~niv~l~g~~ 472 (495)
.++.+++.. .....||+|++|.||+|.+ +|+.||||+++....... ..+.|.+|+++|.+++|||||+++|++
T Consensus 14 ~i~~~~i~~-----~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~ 87 (283)
T PHA02988 14 CIESDDIDK-----YTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFI 87 (283)
T ss_pred ecCHHHcCC-----CCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeE
Confidence 445566632 2247899999999999999 688999999976532211 146788999999999999999999999
Q ss_pred Ee----CCEEEEEEEecCCCCHhhhhC
Q 040888 473 SE----QGHNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 473 ~~----~~~~~lv~ey~~~GsL~~~L~ 495 (495)
.+ ....++||||+++|+|.++++
T Consensus 88 ~~~~~~~~~~~lv~Ey~~~g~L~~~l~ 114 (283)
T PHA02988 88 IDIVDDLPRLSLILEYCTRGYLREVLD 114 (283)
T ss_pred EecccCCCceEEEEEeCCCCcHHHHHh
Confidence 77 346789999999999998863
No 49
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.19 E-value=6.4e-11 Score=113.34 Aligned_cols=88 Identities=24% Similarity=0.475 Sum_probs=76.8
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
++|...+.||+|+||.||++.+.++..+|+|.+..... ..++|..|++++++++||||++++++|...+..++||||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM---SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc---cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 34666788999999999999998888899999865432 246789999999999999999999999999999999999
Q ss_pred cCCCCHhhhhC
Q 040888 485 YRNGSLHEFLH 495 (495)
Q Consensus 485 ~~~GsL~~~L~ 495 (495)
+++|+|.++++
T Consensus 81 ~~~~~L~~~~~ 91 (256)
T cd05114 81 MENGCLLNYLR 91 (256)
T ss_pred CCCCcHHHHHH
Confidence 99999998763
No 50
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.18 E-value=7.2e-11 Score=113.79 Aligned_cols=93 Identities=26% Similarity=0.312 Sum_probs=80.4
Q ss_pred HHHhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 400 LLTATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 400 ~~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
++.+++++.....||+|+||.||+|... ++..||+|.+..... ...+.+.+|++++++++|+||+++++++..++..
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS--RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH--HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 4556777877889999999999999974 578899999875432 2356799999999999999999999999999999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++|+||+++++|.+++
T Consensus 81 ~lv~e~~~~~~L~~~l 96 (268)
T cd06624 81 KIFMEQVPGGSLSALL 96 (268)
T ss_pred EEEEecCCCCCHHHHH
Confidence 9999999999999876
No 51
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.18 E-value=5.3e-11 Score=120.27 Aligned_cols=90 Identities=18% Similarity=0.324 Sum_probs=77.5
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|+.. +++.||||++...... ....+.+.+|++++..++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36788899999999999999984 5899999999754221 122456889999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 E~~~~g~L~~~l 92 (364)
T cd05599 81 EYLPGGDMMTLL 92 (364)
T ss_pred CCCCCcHHHHHH
Confidence 999999999876
No 52
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.18 E-value=9.6e-11 Score=116.96 Aligned_cols=89 Identities=21% Similarity=0.253 Sum_probs=77.6
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|+..+.||+|+||.||++... ++..+|+|.+..... ....+.+.+|++++.+++|+|||+++++|..++..++|||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 56888899999999999999985 588999998875422 2234678999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 84 ~~~~~~L~~~l 94 (333)
T cd06650 84 HMDGGSLDQVL 94 (333)
T ss_pred cCCCCcHHHHH
Confidence 99999999876
No 53
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.18 E-value=6.5e-12 Score=124.43 Aligned_cols=154 Identities=32% Similarity=0.451 Sum_probs=118.5
Q ss_pred CCEeEEEcCCCCCccccccccCCCCC---CcEEECcCCCCCCC----CC---CCCCCCCcEEECcCCcCCCC----cchh
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKS---VSYLDVSNNNLKDS----IP---YQLPPNLKHLDLSENQFSGT----VPYS 134 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~---L~~L~Ls~N~l~g~----~p---~~~~~~L~~L~Ls~N~l~g~----~p~~ 134 (495)
.+++.|+|++|.+.+..+..+..+.. |+.|++++|++++. +. ....++|+.|+|++|.+++. ++..
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 160 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKA 160 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHH
Confidence 58999999999998777766666665 99999999998842 11 12236899999999999954 3445
Q ss_pred ccCCCCCcEEEcccCcCCCc----cchhhhCCCCCcEEEccCCcCCCc----CcccccCCCCCCEEeccCCcccccc-cc
Q 040888 135 ISQMSELKYLNLGSNQLNGQ----LSDMFQKNEKLETLDLSKNQLTGE----LPRSFASLSSLKKLYLQNNQFTGSI-NV 205 (495)
Q Consensus 135 ~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~-~~ 205 (495)
+..+.+|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++. ++..+..+++|++|++++|.+++.. ..
T Consensus 161 ~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~ 240 (319)
T cd00116 161 LRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAA 240 (319)
T ss_pred HHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHH
Confidence 67788999999999999853 445566778999999999999754 3455677889999999999998622 11
Q ss_pred c-C-----CccCcEEEeecCCCc
Q 040888 206 L-G-----KLPLDELNVENNKFS 222 (495)
Q Consensus 206 ~-~-----~~~L~~l~l~~N~l~ 222 (495)
+ . ...|+.|++++|.++
T Consensus 241 l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 241 LASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHHHHhccCCCceEEEccCCCCC
Confidence 1 1 124999999999987
No 54
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.17 E-value=4.2e-11 Score=122.34 Aligned_cols=91 Identities=32% Similarity=0.549 Sum_probs=76.3
Q ss_pred ccCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCC
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSEQG 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~ 476 (495)
.++|...+.||+|+||.||+|.+. .+..||||++...... ...+.+.+|++++.++. |||||+++++|...+
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS-SEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh-hHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 345667899999999999999863 3468999999754322 22457899999999997 999999999999999
Q ss_pred EEEEEEEecCCCCHhhhhC
Q 040888 477 HNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L~ 495 (495)
..++|+||+++|+|.++||
T Consensus 115 ~~~iv~E~~~~g~L~~~l~ 133 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLH 133 (401)
T ss_pred CcEEEEeccCCCcHHHHHH
Confidence 9999999999999999874
No 55
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.17 E-value=2.8e-11 Score=122.14 Aligned_cols=97 Identities=25% Similarity=0.436 Sum_probs=84.3
Q ss_pred cHHHHHHhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC
Q 040888 396 SMADLLTATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ 475 (495)
Q Consensus 396 ~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~ 475 (495)
+.+++...-+.+.....||+|+||+||+|.+.+ .||||.+..........+.|..||.++++.||.||+-+.|||...
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 345666666667778999999999999999943 589999988766555678999999999999999999999999987
Q ss_pred CEEEEEEEecCCCCHhhhhC
Q 040888 476 GHNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 476 ~~~~lv~ey~~~GsL~~~L~ 495 (495)
+. ++|..++++-+|+.+||
T Consensus 461 ~~-AIiTqwCeGsSLY~hlH 479 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLH 479 (678)
T ss_pred ce-eeeehhccCchhhhhcc
Confidence 77 99999999999999987
No 56
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.17 E-value=9.1e-11 Score=117.09 Aligned_cols=89 Identities=18% Similarity=0.314 Sum_probs=77.2
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+|...+.||+|+||.||+|+.. +++.||||++....... ...+.+.+|++++..++||||+++++++...+..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 5778899999999999999985 58899999997543211 234678899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 82 ~~~g~~L~~~l 92 (333)
T cd05600 82 YVPGGDFRTLL 92 (333)
T ss_pred CCCCCCHHHHH
Confidence 99999999876
No 57
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.17 E-value=1.2e-10 Score=116.13 Aligned_cols=89 Identities=21% Similarity=0.231 Sum_probs=77.6
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+++.. ++..+|+|.+..... ....+.+.+|++++.+++||||+++++++..++..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 56788899999999999999985 588999999875422 2234679999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 84 ~~~~~~L~~~l 94 (331)
T cd06649 84 HMDGGSLDQVL 94 (331)
T ss_pred cCCCCcHHHHH
Confidence 99999999876
No 58
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.16 E-value=2.2e-10 Score=131.70 Aligned_cols=35 Identities=34% Similarity=0.333 Sum_probs=20.6
Q ss_pred CCcEEEccCCcCCCcCcccccCCCCCCEEeccCCc
Q 040888 164 KLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQ 198 (495)
Q Consensus 164 ~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 198 (495)
+|+.|+|++|...+.+|.+++++++|+.|+|++|.
T Consensus 779 sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~ 813 (1153)
T PLN03210 779 SLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCI 813 (1153)
T ss_pred cchheeCCCCCCccccChhhhCCCCCCEEECCCCC
Confidence 45555555555555566666666666666666553
No 59
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.16 E-value=3.9e-11 Score=119.96 Aligned_cols=91 Identities=23% Similarity=0.488 Sum_probs=74.2
Q ss_pred ccCCcccceeccCCceEEEEEEc------CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCC
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY------PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQG 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~ 476 (495)
.++|...+.||+|+||.||+|.. .++..||||++..... ....+.+.+|++++.++ +|||||+++++|...+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT-ASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc-hHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 45677889999999999999974 2356899999975422 12346789999999999 8999999999987644
Q ss_pred -EEEEEEEecCCCCHhhhhC
Q 040888 477 -HNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 477 -~~~lv~ey~~~GsL~~~L~ 495 (495)
..++||||+++|+|.++++
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~ 104 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLR 104 (338)
T ss_pred CceEEEEecCCCCcHHHHHH
Confidence 5789999999999998863
No 60
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.15 E-value=9.2e-11 Score=116.90 Aligned_cols=90 Identities=20% Similarity=0.361 Sum_probs=77.3
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|... +++.||+|.+...... ....+.+.+|++++.+++||||+++++++..++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46777899999999999999985 5889999998754321 122457889999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 98 e~~~~~~L~~~l 109 (329)
T PTZ00263 98 EFVVGGELFTHL 109 (329)
T ss_pred cCCCCChHHHHH
Confidence 999999998876
No 61
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.15 E-value=1.2e-10 Score=118.56 Aligned_cols=89 Identities=17% Similarity=0.254 Sum_probs=76.5
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.|...+.||+|+||.||+|+. .+++.||+|++...... ....+.+.+|++++++++|+|||++++++..++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 467789999999999999987 46889999999754321 1224578899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
||++|+|.+++
T Consensus 82 ~~~gg~L~~~l 92 (382)
T cd05625 82 YIPGGDMMSLL 92 (382)
T ss_pred CCCCCcHHHHH
Confidence 99999998876
No 62
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.15 E-value=1.4e-10 Score=117.73 Aligned_cols=89 Identities=15% Similarity=0.257 Sum_probs=76.7
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+|...+.||+|+||.||+++.. +++.||||.+...... ....+.+.+|++++.+++|+||+++++.+..++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 5778899999999999999874 5899999998754221 1224568899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 82 ~~~~g~L~~~i 92 (376)
T cd05598 82 YIPGGDMMSLL 92 (376)
T ss_pred CCCCCcHHHHH
Confidence 99999999876
No 63
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.15 E-value=6.3e-11 Score=115.90 Aligned_cols=89 Identities=18% Similarity=0.267 Sum_probs=76.3
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+|...+.||+|+||.||+|... +++.||+|++...... ....+.+.+|++++.+++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 5777899999999999999985 6899999998653221 1224568899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 82 ~~~~~~L~~~~ 92 (291)
T cd05612 82 YVPGGELFSYL 92 (291)
T ss_pred CCCCCCHHHHH
Confidence 99999998876
No 64
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.14 E-value=5.3e-11 Score=114.36 Aligned_cols=85 Identities=35% Similarity=0.672 Sum_probs=70.0
Q ss_pred cceeccCCceEEEEEEcC-----CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 410 GRLLGEGTIGRVYRAKYP-----DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
.+.||+|.||.||+|.+. .+..|+||.+..... ....+.|.+|++.+.+++||||++++|+|...+..++|+||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSS-EEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSS-HHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccc-cccceeeeecccccccccccccccccccccccccccccccc
Confidence 478999999999999986 256899999965322 22367899999999999999999999999988889999999
Q ss_pred cCCCCHhhhhC
Q 040888 485 YRNGSLHEFLH 495 (495)
Q Consensus 485 ~~~GsL~~~L~ 495 (495)
+++|+|.++|+
T Consensus 83 ~~~g~L~~~L~ 93 (259)
T PF07714_consen 83 CPGGSLDDYLK 93 (259)
T ss_dssp -TTEBHHHHHH
T ss_pred ccccccccccc
Confidence 99999999873
No 65
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.14 E-value=2.6e-11 Score=116.65 Aligned_cols=89 Identities=19% Similarity=0.410 Sum_probs=78.0
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.|...+.||+|.||+|-+|.. ..|+.||||.++++.... +..-...+|+++|+.+.||||+.++.+|...+.+.+|||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME 133 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME 133 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence 456668899999999999986 679999999998876533 223457899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|..+|+|.+|+
T Consensus 134 YaS~GeLYDYi 144 (668)
T KOG0611|consen 134 YASGGELYDYI 144 (668)
T ss_pred ecCCccHHHHH
Confidence 99999999986
No 66
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.13 E-value=1.5e-10 Score=117.45 Aligned_cols=95 Identities=20% Similarity=0.386 Sum_probs=84.2
Q ss_pred HHhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 401 LTATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 401 ~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
......|.....||+|.|++|..|+.. .+..||+|.+++........+.+.+|+++|..+.|||||+++.+...+...+
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 344677888999999999999999984 5999999999887665444566999999999999999999999999999999
Q ss_pred EEEEecCCCCHhhhhC
Q 040888 480 LIYDYYRNGSLHEFLH 495 (495)
Q Consensus 480 lv~ey~~~GsL~~~L~ 495 (495)
+|+||..+|++++||.
T Consensus 132 lV~eya~~ge~~~yl~ 147 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLV 147 (596)
T ss_pred EEEEeccCchhHHHHH
Confidence 9999999999999873
No 67
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.13 E-value=2.3e-10 Score=112.92 Aligned_cols=89 Identities=20% Similarity=0.213 Sum_probs=76.6
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|+||.||++... ++..+|+|.+..... ....+++.+|++++.+++||||++++++|..++..++|+||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK-PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 5778899999999999999874 588899998865321 22245688999999999999999999999999999999999
Q ss_pred cCCCCHhhhhC
Q 040888 485 YRNGSLHEFLH 495 (495)
Q Consensus 485 ~~~GsL~~~L~ 495 (495)
+++|+|.++++
T Consensus 81 ~~~~~L~~~l~ 91 (308)
T cd06615 81 MDGGSLDQVLK 91 (308)
T ss_pred cCCCcHHHHHH
Confidence 99999998863
No 68
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.13 E-value=1.7e-10 Score=116.61 Aligned_cols=90 Identities=14% Similarity=0.269 Sum_probs=77.0
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|... +++.||+|++...... ....+.+.+|++++.+++|+||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46788899999999999999874 5889999999754321 122456888999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 E~~~gg~L~~~l 92 (363)
T cd05628 81 EFLPGGDMMTLL 92 (363)
T ss_pred cCCCCCcHHHHH
Confidence 999999999876
No 69
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.13 E-value=6.5e-12 Score=132.15 Aligned_cols=123 Identities=32% Similarity=0.358 Sum_probs=75.8
Q ss_pred CcEEECcCCCCCCCCCCCC-C-CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccC
Q 040888 95 VSYLDVSNNNLKDSIPYQL-P-PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSK 172 (495)
Q Consensus 95 L~~L~Ls~N~l~g~~p~~~-~-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~ 172 (495)
|+.|.|.+|.|+...-+.+ . .+|+.|+|++|++.......+.++..|+.|+||+|+|+ .+|+.+..+..|++|...+
T Consensus 361 Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahs 439 (1081)
T KOG0618|consen 361 LQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHS 439 (1081)
T ss_pred HHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcC
Confidence 4555555555554321111 1 56677777777766333345566667777777777776 5666666667777777777
Q ss_pred CcCCCcCcccccCCCCCCEEeccCCcccccc-cccCC-ccCcEEEeecCC
Q 040888 173 NQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGK-LPLDELNVENNK 220 (495)
Q Consensus 173 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~-~~L~~l~l~~N~ 220 (495)
|+|. ..| .+.+++.|+.+|++.|+|+... +.... ..|++||+++|.
T Consensus 440 N~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 440 NQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred Ccee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 7766 556 6777777777777777777544 22222 237777777775
No 70
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.13 E-value=1.4e-10 Score=117.43 Aligned_cols=95 Identities=18% Similarity=0.289 Sum_probs=79.8
Q ss_pred HHHhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE
Q 040888 400 LLTATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGH 477 (495)
Q Consensus 400 ~~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (495)
+....++|...+.||+|+||.||++... +++.+|+|.+...... ....+.+.+|+++++.++||||+++++++..++.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 3344578888999999999999999985 5889999998653221 1224568899999999999999999999999999
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+++|+|.+++
T Consensus 118 ~~lv~Ey~~gg~L~~~l 134 (370)
T cd05621 118 LYMVMEYMPGGDLVNLM 134 (370)
T ss_pred EEEEEcCCCCCcHHHHH
Confidence 99999999999998876
No 71
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.13 E-value=1.8e-11 Score=127.13 Aligned_cols=85 Identities=22% Similarity=0.437 Sum_probs=72.4
Q ss_pred ccceeccCCceEEEEEEc-CCC----CEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 409 TGRLLGEGTIGRVYRAKY-PDG----KVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 409 ~~~~iG~G~~g~Vy~~~~-~~g----~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
..++||+|+||+||||.+ +.| .+||+|++..... .....+|.+|+-.|++++||||++|+|+|.... ..||.+
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~-~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS-PKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCC-chhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 468999999999999987 444 4789999876532 233678999999999999999999999998766 789999
Q ss_pred ecCCCCHhhhhC
Q 040888 484 YYRNGSLHEFLH 495 (495)
Q Consensus 484 y~~~GsL~~~L~ 495 (495)
|||.|.|.+|+|
T Consensus 778 ~mP~G~LlDyvr 789 (1177)
T KOG1025|consen 778 LMPLGCLLDYVR 789 (1177)
T ss_pred hcccchHHHHHH
Confidence 999999999874
No 72
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.13 E-value=4.9e-12 Score=133.03 Aligned_cols=153 Identities=31% Similarity=0.405 Sum_probs=121.6
Q ss_pred CCCEeEEEcCCCCCc----------------------cccccccCCCCCCcEEECcCCCCCCCCCCCCC-----------
Q 040888 68 GSSVTEIKLSGLGLN----------------------GQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP----------- 114 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~----------------------g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----------- 114 (495)
...|+.|+...|+|+ ..+|+.+..+++|++|||..|+|. ..|..+.
T Consensus 263 ~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln 341 (1081)
T KOG0618|consen 263 CANLEALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLN 341 (1081)
T ss_pred cccceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHh
Confidence 356777777777764 245667777888999999988886 3332210
Q ss_pred -----------------CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCC
Q 040888 115 -----------------PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTG 177 (495)
Q Consensus 115 -----------------~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 177 (495)
+.|+.|.|.+|.|+...-+.+-+..+|++|+|++|+|.......+.++..|+.|+||+|+|+
T Consensus 342 ~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~- 420 (1081)
T KOG0618|consen 342 VSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT- 420 (1081)
T ss_pred hhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-
Confidence 34777888888888777777888899999999999998555556788899999999999998
Q ss_pred cCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcc
Q 040888 178 ELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 178 ~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g 223 (495)
.+|.++.++..|++|...+|++.-.+ .+..++ |+.+|+|.|+|+-
T Consensus 421 ~Lp~tva~~~~L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 421 TLPDTVANLGRLHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNNLSE 466 (1081)
T ss_pred hhhHHHHhhhhhHHHhhcCCceeech-hhhhcCcceEEecccchhhh
Confidence 78899999999999999999988666 666666 9999999999874
No 73
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.12 E-value=1.6e-10 Score=115.65 Aligned_cols=90 Identities=23% Similarity=0.373 Sum_probs=76.0
Q ss_pred cCCcccceeccCCceEEEEEEcCC--CCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD--GKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~--g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
++|...+.||+|+||.||+|.... +..||+|++...... ....+.+.+|++++..++|||||++++++...+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 467778999999999999998643 468999998654221 12345788999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 110 ~Ey~~~g~L~~~i 122 (340)
T PTZ00426 110 LEFVIGGEFFTFL 122 (340)
T ss_pred EeCCCCCcHHHHH
Confidence 9999999999876
No 74
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.12 E-value=1.1e-10 Score=118.17 Aligned_cols=92 Identities=18% Similarity=0.289 Sum_probs=78.3
Q ss_pred hccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
..++|...+.||+|+||.||+++.. +++.||+|++...... ....+.+.+|+++++.++||||+++++++..++..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4567888999999999999999984 5889999999653221 1224567899999999999999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 121 v~Ey~~gg~L~~~l 134 (370)
T cd05596 121 VMEYMPGGDLVNLM 134 (370)
T ss_pred EEcCCCCCcHHHHH
Confidence 99999999998876
No 75
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.12 E-value=1.6e-10 Score=110.89 Aligned_cols=87 Identities=23% Similarity=0.448 Sum_probs=77.1
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
++|...+.||+|+||.||+|...++..||+|.+..... ..+.|.+|+.++.+++|+||+++++++...+..++||||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch---hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 45677899999999999999988888999999865332 256899999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 83 ~~~~~L~~~l 92 (261)
T cd05072 83 MAKGSLLDFL 92 (261)
T ss_pred CCCCcHHHHH
Confidence 9999999876
No 76
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.12 E-value=2e-10 Score=109.58 Aligned_cols=90 Identities=24% Similarity=0.451 Sum_probs=77.8
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|++|.||+|... ++..|++|.+..........+.+.+|++++++++|||++++++++..++..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4666789999999999999984 688999999875433333457899999999999999999999999999999999999
Q ss_pred cCCCCHhhhhC
Q 040888 485 YRNGSLHEFLH 495 (495)
Q Consensus 485 ~~~GsL~~~L~ 495 (495)
+++++|.++++
T Consensus 81 ~~~~~L~~~l~ 91 (256)
T cd08529 81 AENGDLHKLLK 91 (256)
T ss_pred CCCCcHHHHHH
Confidence 99999998763
No 77
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.12 E-value=9.6e-11 Score=118.88 Aligned_cols=91 Identities=30% Similarity=0.515 Sum_probs=76.2
Q ss_pred ccCCcccceeccCCceEEEEEEc------CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCC
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY------PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQG 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~ 476 (495)
.++|+..+.||+|+||.||+|+. .++..||||++...... ...+.+.+|+++++.+ +|+|||+++++|...+
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT-DEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH-HHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 34677889999999999999874 23458999999754322 2245788999999999 8999999999999999
Q ss_pred EEEEEEEecCCCCHhhhhC
Q 040888 477 HNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L~ 495 (495)
..++||||+++|+|.++++
T Consensus 116 ~~~lv~ey~~~g~L~~~l~ 134 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLR 134 (374)
T ss_pred CeEEeHhhccCCcHHHHHH
Confidence 9999999999999998863
No 78
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.12 E-value=2.2e-10 Score=114.33 Aligned_cols=90 Identities=26% Similarity=0.404 Sum_probs=76.8
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+++.. +++.||+|.+..... .....+.|.+|+.++..++|+||+++++++..++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 36778899999999999999974 589999999975322 1223456889999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 e~~~g~~L~~~l 92 (331)
T cd05597 81 DYYVGGDLLTLL 92 (331)
T ss_pred ecCCCCcHHHHH
Confidence 999999999876
No 79
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.12 E-value=2.1e-10 Score=114.48 Aligned_cols=90 Identities=23% Similarity=0.356 Sum_probs=76.6
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+++.. +++.||+|.+..... .....+.+.+|+.++..++|+||+++++++...+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36778899999999999999975 588999999875322 1222456888999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 Ey~~gg~L~~~l 92 (331)
T cd05624 81 DYYVGGDLLTLL 92 (331)
T ss_pred eCCCCCcHHHHH
Confidence 999999999886
No 80
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.12 E-value=2.3e-10 Score=114.80 Aligned_cols=91 Identities=26% Similarity=0.492 Sum_probs=77.3
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccc---cccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCCEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ---RANSESFSEIVQNISRIR-HTNIAELVGFCSEQGHN 478 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~ 478 (495)
.+.|...+.||+|+||+||.|.. .++..||+|.+...... ....+...+|+.++++++ ||||++++.++......
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 45778889999999999999987 46899999977654211 122456678999999999 99999999999999999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+.+|+|++++
T Consensus 96 ~ivmEy~~gGdL~~~i 111 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYI 111 (370)
T ss_pred EEEEEecCCccHHHHH
Confidence 9999999999999986
No 81
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.11 E-value=2.4e-10 Score=111.38 Aligned_cols=88 Identities=18% Similarity=0.302 Sum_probs=74.8
Q ss_pred CcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
|...+.||+|+||.||+|.. .+|+.||||.+....... .....+.+|++++.+++|+|++++.+++..++..++|+||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 56678999999999999987 568999999987543221 2234688999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 82 ~~~g~L~~~~ 91 (285)
T cd05631 82 MNGGDLKFHI 91 (285)
T ss_pred cCCCcHHHHH
Confidence 9999997764
No 82
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.11 E-value=6.1e-10 Score=128.10 Aligned_cols=161 Identities=21% Similarity=0.247 Sum_probs=109.4
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC-CC---------------------CcEEECcCCcC
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP-PN---------------------LKHLDLSENQF 127 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~~---------------------L~~L~Ls~N~l 127 (495)
+++.|+|.+|..-..+|..++++++|+.|+|++|..-+.+|..+. ++ |+.|+|++|.+
T Consensus 658 ~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i 737 (1153)
T PLN03210 658 NLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAI 737 (1153)
T ss_pred cccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccccCCcCeeecCCCcc
Confidence 466666666665566777777777777777777654445554332 34 44444445544
Q ss_pred CCCcchhc------------------------------cCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCC
Q 040888 128 SGTVPYSI------------------------------SQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTG 177 (495)
Q Consensus 128 ~g~~p~~~------------------------------~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 177 (495)
. .+|..+ ..+++|+.|+|++|...+.+|..++++++|+.|++++|..-+
T Consensus 738 ~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~ 816 (1153)
T PLN03210 738 E-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLE 816 (1153)
T ss_pred c-cccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcC
Confidence 3 333321 112467888888888888899999999999999999987556
Q ss_pred cCcccccCCCCCCEEeccCCcccccccccCCccCcEEEeecCCCcccCchhhhhccc
Q 040888 178 ELPRSFASLSSLKKLYLQNNQFTGSINVLGKLPLDELNVENNKFSGWVPEELKDIAK 234 (495)
Q Consensus 178 ~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~L~~l~l~~N~l~g~~p~~l~~l~~ 234 (495)
.+|..+ ++++|+.|+|++|.....++... ..|+.|+|++|.++ .+|.++..++.
T Consensus 817 ~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~~-~nL~~L~Ls~n~i~-~iP~si~~l~~ 870 (1153)
T PLN03210 817 TLPTGI-NLESLESLDLSGCSRLRTFPDIS-TNISDLNLSRTGIE-EVPWWIEKFSN 870 (1153)
T ss_pred eeCCCC-CccccCEEECCCCCccccccccc-cccCEeECCCCCCc-cChHHHhcCCC
Confidence 788776 78999999999876443332211 12789999999887 57877776653
No 83
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.11 E-value=2.2e-10 Score=111.65 Aligned_cols=88 Identities=19% Similarity=0.309 Sum_probs=74.6
Q ss_pred CcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
|...+.||+|+||.||++.. .+++.||||++....... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 56678999999999999987 468999999997543221 1235678899999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 82 ~~~~~L~~~~ 91 (285)
T cd05605 82 MNGGDLKFHI 91 (285)
T ss_pred cCCCcHHHHH
Confidence 9999998765
No 84
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.11 E-value=2.6e-10 Score=109.71 Aligned_cols=89 Identities=24% Similarity=0.412 Sum_probs=76.1
Q ss_pred cCCcccceeccCCceEEEEEEcCC----CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD----GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
++|...+.||+|+||.||+|.... ...||||.+..... .....+|.+|+.++.+++||||+++++++...+..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS-DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 467788999999999999998742 45899999875432 2235679999999999999999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 83 v~e~~~~~~L~~~~ 96 (266)
T cd05033 83 ITEYMENGSLDKFL 96 (266)
T ss_pred EEEcCCCCCHHHHH
Confidence 99999999999876
No 85
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.10 E-value=1.1e-10 Score=111.88 Aligned_cols=91 Identities=27% Similarity=0.501 Sum_probs=79.7
Q ss_pred hccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
+..+|...+.||+|+||.||+|...++..+|+|.+..... ...+.+.+|++++.+++|+||+++++++...+..++||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL--LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch--hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence 4456778899999999999999998899999999876432 12467899999999999999999999999999999999
Q ss_pred EecCCCCHhhhhC
Q 040888 483 DYYRNGSLHEFLH 495 (495)
Q Consensus 483 ey~~~GsL~~~L~ 495 (495)
||+++|+|.++++
T Consensus 82 e~~~~~~L~~~~~ 94 (261)
T cd05148 82 ELMEKGSLLAFLR 94 (261)
T ss_pred eecccCCHHHHHh
Confidence 9999999998863
No 86
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.10 E-value=2.3e-10 Score=111.84 Aligned_cols=89 Identities=22% Similarity=0.371 Sum_probs=80.4
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|.....||.|..+.||+|.. +.+..||||++..+.+... .+...+|+..|+-++||||++.+..|..+...|+||.
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 4677889999999999999986 6789999999988766543 6788999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
||.+|++.+.+
T Consensus 105 fMa~GS~ldIi 115 (516)
T KOG0582|consen 105 FMAGGSLLDII 115 (516)
T ss_pred hhcCCcHHHHH
Confidence 99999998876
No 87
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.10 E-value=2.8e-10 Score=112.80 Aligned_cols=84 Identities=23% Similarity=0.405 Sum_probs=71.3
Q ss_pred ceeccCCceEEEEEEc----CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecC
Q 040888 411 RLLGEGTIGRVYRAKY----PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
+.||+|+||.||++.. .+|+.||+|++............+..|++++.+++||||+++++++..++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 358899999997643322234567889999999999999999999999999999999999
Q ss_pred CCCHhhhh
Q 040888 487 NGSLHEFL 494 (495)
Q Consensus 487 ~GsL~~~L 494 (495)
+|+|.+++
T Consensus 82 ~~~L~~~l 89 (318)
T cd05582 82 GGDLFTRL 89 (318)
T ss_pred CCcHHHHH
Confidence 99998875
No 88
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.09 E-value=4.7e-10 Score=108.00 Aligned_cols=88 Identities=23% Similarity=0.351 Sum_probs=76.2
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|+. .+++.||+|++..... .....+.+|+.++.+++||||+++++++..++..++|+|
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e 86 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME 86 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence 4677789999999999999997 5688999999865422 224568899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 87 ~~~~~~L~~~~ 97 (267)
T cd06646 87 YCGGGSLQDIY 97 (267)
T ss_pred CCCCCcHHHHH
Confidence 99999998875
No 89
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.09 E-value=4.7e-10 Score=107.85 Aligned_cols=88 Identities=25% Similarity=0.532 Sum_probs=75.4
Q ss_pred CcccceeccCCceEEEEEEcCCCCEEEEEEecCcccc----cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQ----RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~----~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
|...+.||+|+||.||+|...+++.+|||.+...... ....+.+.+|++.+++++|+||++++++|...+..++|+
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 5567889999999999999888999999998653211 112356889999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 82 e~~~~~~L~~~l 93 (265)
T cd06631 82 EFVPGGSISSIL 93 (265)
T ss_pred ecCCCCcHHHHH
Confidence 999999999876
No 90
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.09 E-value=2.5e-10 Score=109.56 Aligned_cols=88 Identities=23% Similarity=0.458 Sum_probs=77.9
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.++|...+.||+|++|.||+|...+++.||+|.++.... ..++|.+|++++++++|+||+++++++...+..++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 445777899999999999999987788899999875432 25679999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 82 ~~~~~~L~~~~ 92 (261)
T cd05068 82 LMKYGSLLEYL 92 (261)
T ss_pred cccCCcHHHHH
Confidence 99999999876
No 91
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.09 E-value=2.3e-10 Score=115.92 Aligned_cols=98 Identities=18% Similarity=0.305 Sum_probs=81.8
Q ss_pred HHHHHHhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEe
Q 040888 397 MADLLTATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSE 474 (495)
Q Consensus 397 ~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~ 474 (495)
..++....++|...+.||+|+||.||++... +++.+|+|.+..... .....+.+.+|++++..++||||+++++++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3445556688999999999999999999985 588999999865322 11224568899999999999999999999999
Q ss_pred CCEEEEEEEecCCCCHhhhh
Q 040888 475 QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 475 ~~~~~lv~ey~~~GsL~~~L 494 (495)
++..++||||+++|+|.+++
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~ 134 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLM 134 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHH
Confidence 99999999999999998875
No 92
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.09 E-value=1.1e-10 Score=113.07 Aligned_cols=90 Identities=22% Similarity=0.341 Sum_probs=77.1
Q ss_pred CCcccceeccCCceEEEEEEcCC-CCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.|...+.||+|..|+||.+++++ +..+|+|++.+.... +....+...|-++|+.++||.|+.|++.+..++..+++||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 45556889999999999999965 689999999876543 2234566788899999999999999999999999999999
Q ss_pred ecCCCCHhhhhC
Q 040888 484 YYRNGSLHEFLH 495 (495)
Q Consensus 484 y~~~GsL~~~L~ 495 (495)
||+||+|+..+|
T Consensus 158 yCpGGdL~~Lrq 169 (459)
T KOG0610|consen 158 YCPGGDLHSLRQ 169 (459)
T ss_pred cCCCccHHHHHh
Confidence 999999987754
No 93
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.09 E-value=2.5e-10 Score=113.71 Aligned_cols=90 Identities=22% Similarity=0.328 Sum_probs=77.2
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||++... +++.||+|++..... .....+.+.+|++++..++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36778899999999999999874 689999999976432 1123456889999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 e~~~~~~L~~~l 92 (330)
T cd05601 81 EYQPGGDLLSLL 92 (330)
T ss_pred CCCCCCCHHHHH
Confidence 999999999876
No 94
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.09 E-value=2.6e-10 Score=111.08 Aligned_cols=88 Identities=22% Similarity=0.378 Sum_probs=74.8
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|+||.||+|+.+ +++.||||++..........+.+.+|++++.+++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 5777899999999999999985 588999999875433223356788999999999999999999999999999999999
Q ss_pred cCCCCHhhh
Q 040888 485 YRNGSLHEF 493 (495)
Q Consensus 485 ~~~GsL~~~ 493 (495)
++++.+..+
T Consensus 82 ~~~~~l~~~ 90 (287)
T cd07848 82 VEKNMLELL 90 (287)
T ss_pred CCCCHHHHH
Confidence 998876543
No 95
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.09 E-value=1.9e-10 Score=115.53 Aligned_cols=90 Identities=20% Similarity=0.349 Sum_probs=77.9
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|... +++.||+|++....... ...+.+.+|++++..++|+||+++++++..++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 35777899999999999999985 68999999997543221 23567899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 e~~~~~~L~~~l 92 (350)
T cd05573 81 EYMPGGDLMNLL 92 (350)
T ss_pred cCCCCCCHHHHH
Confidence 999999999876
No 96
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.08 E-value=3.6e-10 Score=112.28 Aligned_cols=84 Identities=20% Similarity=0.311 Sum_probs=71.5
Q ss_pred ceeccCCceEEEEEEc-CCCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCC
Q 040888 411 RLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNG 488 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 488 (495)
+.||+|+||.||++.. .+|..||+|++...... ......+.+|++++.+++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4689999999999987 46899999999754221 122456788999999999999999999999999999999999999
Q ss_pred CHhhhh
Q 040888 489 SLHEFL 494 (495)
Q Consensus 489 sL~~~L 494 (495)
+|.+++
T Consensus 81 ~L~~~l 86 (323)
T cd05595 81 ELFFHL 86 (323)
T ss_pred cHHHHH
Confidence 998765
No 97
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.08 E-value=2.5e-10 Score=114.94 Aligned_cols=87 Identities=18% Similarity=0.344 Sum_probs=73.5
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|+||.||+|+.. +++.||||.+..... ....+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE-DTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc-HHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 3445688999999999999874 689999999865422 22346789999999999999999999999999999999999
Q ss_pred cCCCCHhhh
Q 040888 485 YRNGSLHEF 493 (495)
Q Consensus 485 ~~~GsL~~~ 493 (495)
+++|+|.+.
T Consensus 154 ~~~~~L~~~ 162 (353)
T PLN00034 154 MDGGSLEGT 162 (353)
T ss_pred CCCCccccc
Confidence 999998653
No 98
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.08 E-value=5.2e-10 Score=107.46 Aligned_cols=90 Identities=20% Similarity=0.385 Sum_probs=77.6
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|... +|+.||+|.++..... ....+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 56788899999999999999986 7999999998643222 122567899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 82 e~~~~~~L~~~l 93 (267)
T cd08224 82 ELADAGDLSRMI 93 (267)
T ss_pred ecCCCCCHHHHH
Confidence 999999998765
No 99
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.08 E-value=5.5e-10 Score=106.74 Aligned_cols=89 Identities=16% Similarity=0.311 Sum_probs=76.9
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|+..+.||+|+||.||.+.. .++..+++|.+..........+++.+|++++++++|+||+++++++...+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 366779999999999998886 4688999999875543333456789999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 81 ~~~~~L~~~~ 90 (256)
T cd08221 81 ANGGTLYDKI 90 (256)
T ss_pred cCCCcHHHHH
Confidence 9999999876
No 100
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.08 E-value=3.1e-10 Score=110.48 Aligned_cols=88 Identities=22% Similarity=0.286 Sum_probs=75.5
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|+||.||++.. ++++.||+|.+..... ....+.|.+|++++..++||||+++++++...+..++||||
T Consensus 6 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 6 DLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK-SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc-chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 456678999999999999987 4688999998865422 22356799999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 85 ~~~~~L~~~~ 94 (284)
T cd06620 85 MDCGSLDRIY 94 (284)
T ss_pred CCCCCHHHHH
Confidence 9999998765
No 101
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.08 E-value=4e-10 Score=113.79 Aligned_cols=90 Identities=13% Similarity=0.297 Sum_probs=77.0
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||++... +++.||+|++..... .....+.+.+|++++.+++|+||+++++++...+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36777899999999999999885 589999999975422 1223456888999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 E~~~gg~L~~~l 92 (360)
T cd05627 81 EFLPGGDMMTLL 92 (360)
T ss_pred eCCCCccHHHHH
Confidence 999999999876
No 102
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.08 E-value=4.2e-10 Score=112.01 Aligned_cols=85 Identities=16% Similarity=0.280 Sum_probs=72.9
Q ss_pred cceeccC--CceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecC
Q 040888 410 GRLLGEG--TIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 410 ~~~iG~G--~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
..+||+| +|++||++.. .+|+.||+|++..........+.+.+|+++++.++|||||+++++|..++..++|+||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4689999 7899999988 568999999997654323334567889999999999999999999999999999999999
Q ss_pred CCCHhhhh
Q 040888 487 NGSLHEFL 494 (495)
Q Consensus 487 ~GsL~~~L 494 (495)
+|+|.+++
T Consensus 83 ~~~l~~~~ 90 (327)
T cd08227 83 YGSAKDLI 90 (327)
T ss_pred CCcHHHHH
Confidence 99998875
No 103
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.08 E-value=4e-10 Score=111.97 Aligned_cols=84 Identities=21% Similarity=0.309 Sum_probs=71.7
Q ss_pred ceeccCCceEEEEEEc-CCCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCC
Q 040888 411 RLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNG 488 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 488 (495)
+.||+|+||.||+++. .+|+.||+|++...... ......+.+|++++.+++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999987 46899999999754321 122456889999999999999999999999999999999999999
Q ss_pred CHhhhh
Q 040888 489 SLHEFL 494 (495)
Q Consensus 489 sL~~~L 494 (495)
+|.+++
T Consensus 81 ~L~~~l 86 (323)
T cd05571 81 ELFFHL 86 (323)
T ss_pred cHHHHH
Confidence 998775
No 104
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.08 E-value=3.9e-10 Score=108.11 Aligned_cols=88 Identities=27% Similarity=0.539 Sum_probs=78.0
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.++|...+.||+|+||.||+|..+++..||||.+..... ..+++.+|++++++++|+||+++++++......++|||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 456778899999999999999988888999999875432 24679999999999999999999999998889999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 82 ~~~~~~L~~~i 92 (261)
T cd05034 82 YMSKGSLLDFL 92 (261)
T ss_pred ccCCCCHHHHH
Confidence 99999999876
No 105
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.08 E-value=4.2e-10 Score=107.10 Aligned_cols=83 Identities=24% Similarity=0.463 Sum_probs=72.4
Q ss_pred ceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCCH
Q 040888 411 RLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGSL 490 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 490 (495)
++||+|+||.||+|..+++..+|+|.+..... ......|.+|++++.+++||||++++++|...+..++||||+++|+|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP-QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 36899999999999988899999999875432 22245789999999999999999999999999999999999999999
Q ss_pred hhhh
Q 040888 491 HEFL 494 (495)
Q Consensus 491 ~~~L 494 (495)
.+++
T Consensus 80 ~~~~ 83 (250)
T cd05085 80 LSFL 83 (250)
T ss_pred HHHH
Confidence 8875
No 106
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.08 E-value=3.3e-10 Score=109.25 Aligned_cols=83 Identities=23% Similarity=0.411 Sum_probs=69.9
Q ss_pred ceeccCCceEEEEEEcCC---CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYPD---GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~---g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||.||+|+..+ +..+|+|.++.... ......|.+|+.++++++||||++++++|.+....++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 358999999999998643 45789999875432 12245789999999999999999999999998889999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 80 g~L~~~l 86 (269)
T cd05087 80 GDLKGYL 86 (269)
T ss_pred CcHHHHH
Confidence 9999876
No 107
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.08 E-value=2.4e-10 Score=111.54 Aligned_cols=91 Identities=20% Similarity=0.350 Sum_probs=76.0
Q ss_pred hccCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG 476 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (495)
.+++|...+.||+|+||.||+|..+ .+..||+|.+...... .....+.+|+.++.+++||||+++++++...+
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4567888899999999999999753 2458999998654321 22346889999999999999999999999999
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++||||+++|+|.+++
T Consensus 83 ~~~lv~e~~~~g~L~~~l 100 (288)
T cd05061 83 PTLVVMELMAHGDLKSYL 100 (288)
T ss_pred CcEEEEeCCCCCCHHHHH
Confidence 999999999999999886
No 108
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.08 E-value=7e-11 Score=101.93 Aligned_cols=86 Identities=19% Similarity=0.368 Sum_probs=72.5
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|+..+.||+|.||+||||+.. .++.||+|+.+.+....+....-.+|+.+++.++|+|||++++....+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 3555688999999999999974 588999999987655444566789999999999999999999999999999999999
Q ss_pred cCCCCHhh
Q 040888 485 YRNGSLHE 492 (495)
Q Consensus 485 ~~~GsL~~ 492 (495)
+.. +|..
T Consensus 83 cdq-dlkk 89 (292)
T KOG0662|consen 83 CDQ-DLKK 89 (292)
T ss_pred hhH-HHHH
Confidence 964 4433
No 109
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.08 E-value=4.6e-10 Score=122.67 Aligned_cols=90 Identities=23% Similarity=0.357 Sum_probs=77.6
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|... +|+.||+|+++..... ....++|.+|++++++++|||||++++++..++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 46778899999999999999974 5899999999754221 122467999999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 82 EY~eGGSL~~lL 93 (932)
T PRK13184 82 PYIEGYTLKSLL 93 (932)
T ss_pred EcCCCCCHHHHH
Confidence 999999998875
No 110
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.07 E-value=2.7e-10 Score=110.34 Aligned_cols=81 Identities=26% Similarity=0.439 Sum_probs=67.9
Q ss_pred eeccCCceEEEEEEcCC-------------------------CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcc
Q 040888 412 LLGEGTIGRVYRAKYPD-------------------------GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIA 466 (495)
Q Consensus 412 ~iG~G~~g~Vy~~~~~~-------------------------g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv 466 (495)
.||+|+||.||+|.+.. ...||+|.+..... ...++|.+|++++++++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR--DIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH--HHHHHHHHHHHHHhcCCCCCee
Confidence 58999999999997521 13588999865432 2346788999999999999999
Q ss_pred eEEEEEEeCCEEEEEEEecCCCCHhhhh
Q 040888 467 ELVGFCSEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 467 ~l~g~~~~~~~~~lv~ey~~~GsL~~~L 494 (495)
+++++|......++||||+++|+|..++
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l 107 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCL 107 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHH
Confidence 9999999999999999999999998876
No 111
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.07 E-value=3.7e-10 Score=108.78 Aligned_cols=89 Identities=21% Similarity=0.415 Sum_probs=74.9
Q ss_pred cCCcccceeccCCceEEEEEEcC----CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP----DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
++|...+.||+|+||.||+|... .+..+|+|.+..... ....+.|.+|+.++.+++||||+++++++..++..++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT-EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 35677899999999999999863 234799999875432 2235689999999999999999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 83 v~e~~~~~~L~~~~ 96 (267)
T cd05066 83 VTEYMENGSLDAFL 96 (267)
T ss_pred EEEcCCCCCHHHHH
Confidence 99999999999886
No 112
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.07 E-value=5.2e-10 Score=112.36 Aligned_cols=91 Identities=24% Similarity=0.419 Sum_probs=79.1
Q ss_pred ccCCcccceeccCCceEEEEEEcCC-CCEEEEEEecCcccccc-cHHHHHHHHHHHhcCC-CCCcceEEEEEEeCCEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQRA-NSESFSEIVQNISRIR-HTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~-~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~l 480 (495)
...|...+.||+|.||.||+|+.+. |+.+|+|.+.+...... ..+...+|+++|.++. |||||.+.+.+......++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 3456677899999999999999865 99999999987654321 2467899999999998 9999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
|||++.+|+|++.+
T Consensus 114 vmEL~~GGeLfd~i 127 (382)
T KOG0032|consen 114 VMELCEGGELFDRI 127 (382)
T ss_pred EEEecCCchHHHHH
Confidence 99999999999875
No 113
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.07 E-value=3.5e-10 Score=108.34 Aligned_cols=86 Identities=24% Similarity=0.473 Sum_probs=75.1
Q ss_pred CCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
+|...+.||+|+||.||+|...++..+|+|.+..... ..++|.+|+.++.+++||||++++++|...+..++||||+
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc---cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 4566788999999999999987777899999875432 2467999999999999999999999999888899999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
++|+|.+++
T Consensus 82 ~~~~l~~~i 90 (256)
T cd05113 82 SNGCLLNYL 90 (256)
T ss_pred CCCcHHHHH
Confidence 999998876
No 114
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.07 E-value=2.6e-10 Score=110.50 Aligned_cols=91 Identities=20% Similarity=0.369 Sum_probs=76.5
Q ss_pred hccCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG 476 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (495)
++++|...+.||+|+||.||+|... .+..||||++..... .....+|.+|+.++.+++||||+++++++....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4567888899999999999998753 256799999865322 123457899999999999999999999999989
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++|+||+++|+|.+++
T Consensus 83 ~~~lv~e~~~~~~L~~~~ 100 (277)
T cd05062 83 PTLVIMELMTRGDLKSYL 100 (277)
T ss_pred CeEEEEecCCCCCHHHHH
Confidence 999999999999999876
No 115
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.07 E-value=4.5e-10 Score=112.07 Aligned_cols=90 Identities=26% Similarity=0.393 Sum_probs=76.3
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+++.+ .++.+|+|.+..... .....+.|.+|+.++..++|+||+++.+++...+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36777899999999999999985 478899999865322 1122445889999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 ey~~~g~L~~~l 92 (332)
T cd05623 81 DYYVGGDLLTLL 92 (332)
T ss_pred eccCCCcHHHHH
Confidence 999999999886
No 116
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.06 E-value=4.4e-10 Score=111.08 Aligned_cols=82 Identities=18% Similarity=0.314 Sum_probs=70.5
Q ss_pred eccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCCH
Q 040888 413 LGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGSL 490 (495)
Q Consensus 413 iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 490 (495)
||+|+||.||+|... +++.||+|++..... .......+.+|++++.+++||||+++++++...+..++|+||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999985 588999999875422 122345788999999999999999999999999999999999999999
Q ss_pred hhhh
Q 040888 491 HEFL 494 (495)
Q Consensus 491 ~~~L 494 (495)
.+++
T Consensus 81 ~~~l 84 (312)
T cd05585 81 FHHL 84 (312)
T ss_pred HHHH
Confidence 8876
No 117
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.06 E-value=4.6e-10 Score=109.15 Aligned_cols=89 Identities=22% Similarity=0.479 Sum_probs=75.0
Q ss_pred cCCcccceeccCCceEEEEEEc-----CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-----PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
.+|+..+.||+|+||.||+|.. .++..||+|.+..... ......|.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN-PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 3466678999999999999984 2467899999875322 223467899999999999999999999999999999
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||+++|+|.+++
T Consensus 84 lv~e~~~~~~L~~~l 98 (283)
T cd05090 84 MLFEYLNQGDLHEFL 98 (283)
T ss_pred EEEEcCCCCcHHHHH
Confidence 999999999998876
No 118
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.06 E-value=4.9e-10 Score=107.27 Aligned_cols=86 Identities=26% Similarity=0.480 Sum_probs=75.2
Q ss_pred CCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
+|...+.||+|+||.||++..+++..+|+|.+..... ....|.+|++++.+++|+||+++++++...+..++|+||+
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM---SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 4566788999999999999987777899999865322 2457889999999999999999999999999999999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
++|+|.+++
T Consensus 82 ~~~~L~~~l 90 (256)
T cd05059 82 ANGCLLNYL 90 (256)
T ss_pred CCCCHHHHH
Confidence 999999876
No 119
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.06 E-value=8.3e-10 Score=106.18 Aligned_cols=90 Identities=21% Similarity=0.386 Sum_probs=76.4
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|+. .+++.||||.+..... .......|.+|++++++++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4677889999999999999997 4689999998864322 1222457899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 82 e~~~~~~L~~~~ 93 (267)
T cd08228 82 ELADAGDLSQMI 93 (267)
T ss_pred EecCCCcHHHHH
Confidence 999999998765
No 120
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.06 E-value=1.8e-11 Score=113.65 Aligned_cols=132 Identities=30% Similarity=0.449 Sum_probs=104.0
Q ss_pred ccCCCCCCcEEECcCCCCCCCCCCC--CCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCC
Q 040888 88 QLTNLKSVSYLDVSNNNLKDSIPYQ--LPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKL 165 (495)
Q Consensus 88 ~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L 165 (495)
....-+.|++||||+|.++ .|..+ +.|.++.|+||+|.+. .+. .+..+++|+.||||+|.++ .+..+=..+.++
T Consensus 279 ~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNI 354 (490)
T KOG1259|consen 279 SADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNI 354 (490)
T ss_pred ecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcCE
Confidence 3444567899999999987 33333 3389999999999998 333 3888999999999999997 344455567889
Q ss_pred cEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc--cccCCcc-CcEEEeecCCCcccC
Q 040888 166 ETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI--NVLGKLP-LDELNVENNKFSGWV 225 (495)
Q Consensus 166 ~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~--~~~~~~~-L~~l~l~~N~l~g~~ 225 (495)
+.|.|+.|.+.. -..+..+.+|..||+++|++...- ..++.+| |+.+.|.+|++.+.+
T Consensus 355 KtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 355 KTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred eeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 999999999863 234678889999999999997544 6788898 999999999998754
No 121
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.06 E-value=2.9e-10 Score=105.70 Aligned_cols=91 Identities=21% Similarity=0.399 Sum_probs=78.7
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|+....+|.|+||+|...+.+ +|..+|+|++.+...-+ ...+....|..+|+.+.||.++++.+.|.+....++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46777899999999999999884 58899999998764321 12456778999999999999999999999999999999
Q ss_pred EecCCCCHhhhhC
Q 040888 483 DYYRNGSLHEFLH 495 (495)
Q Consensus 483 ey~~~GsL~~~L~ 495 (495)
||+++|.|+.+||
T Consensus 124 eyv~GGElFS~Lr 136 (355)
T KOG0616|consen 124 EYVPGGELFSYLR 136 (355)
T ss_pred eccCCccHHHHHH
Confidence 9999999999985
No 122
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.06 E-value=1.4e-10 Score=103.14 Aligned_cols=109 Identities=24% Similarity=0.315 Sum_probs=25.8
Q ss_pred CCCCCCcEEECcCCCCCCCCCCC-CCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEE
Q 040888 90 TNLKSVSYLDVSNNNLKDSIPYQ-LPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETL 168 (495)
Q Consensus 90 ~~l~~L~~L~Ls~N~l~g~~p~~-~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 168 (495)
.+...++.|+|++|.++-.-... ...+|+.|||++|.++. ++ .+..++.|+.|++++|+|+..-+.....+++|+.|
T Consensus 16 ~n~~~~~~L~L~~n~I~~Ie~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQISTIENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQEL 93 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S-CHHHHHH-TT--EE
T ss_pred ccccccccccccccccccccchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCccccchHHhCCcCCEE
Confidence 33444555555555554211111 01355555555555552 22 34455666666666666653222112345556666
Q ss_pred EccCCcCCCc-CcccccCCCCCCEEeccCCccc
Q 040888 169 DLSKNQLTGE-LPRSFASLSSLKKLYLQNNQFT 200 (495)
Q Consensus 169 ~ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~ 200 (495)
+|++|++... .-..+..+++|+.|+|.+|.++
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 6666665431 1123445555666666666554
No 123
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.06 E-value=8.8e-10 Score=106.82 Aligned_cols=87 Identities=22% Similarity=0.366 Sum_probs=74.7
Q ss_pred CcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
|+..+.||+|+||.||+|.. .++..||+|.+...... ...+.|.+|++++.+++||||+++++++..++..++||||+
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch-HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 45568899999999999987 46889999998644321 23467899999999999999999999999999999999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
++|+|.+++
T Consensus 85 ~~~~l~~~i 93 (277)
T cd06641 85 GGGSALDLL 93 (277)
T ss_pred CCCcHHHHH
Confidence 999998876
No 124
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.05 E-value=7e-10 Score=110.50 Aligned_cols=84 Identities=21% Similarity=0.314 Sum_probs=71.8
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNG 488 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 488 (495)
+.||+|+||.||++... +++.||||++...... ......+.+|++++.+++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999874 6899999999754321 123457889999999999999999999999999999999999999
Q ss_pred CHhhhh
Q 040888 489 SLHEFL 494 (495)
Q Consensus 489 sL~~~L 494 (495)
+|.+++
T Consensus 81 ~L~~~l 86 (328)
T cd05593 81 ELFFHL 86 (328)
T ss_pred CHHHHH
Confidence 998765
No 125
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.05 E-value=5.7e-10 Score=106.43 Aligned_cols=83 Identities=22% Similarity=0.446 Sum_probs=71.6
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGS 489 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 489 (495)
+.||+|+||.||+|... +++.||+|.+..... ......|.+|++++++++||||++++++|......++|+||+++|+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP-PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 36899999999999984 688999998764321 2234679999999999999999999999999999999999999999
Q ss_pred Hhhhh
Q 040888 490 LHEFL 494 (495)
Q Consensus 490 L~~~L 494 (495)
|.+++
T Consensus 80 L~~~~ 84 (252)
T cd05084 80 FLTFL 84 (252)
T ss_pred HHHHH
Confidence 99886
No 126
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.05 E-value=4e-10 Score=109.84 Aligned_cols=90 Identities=29% Similarity=0.517 Sum_probs=76.9
Q ss_pred ccCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH 477 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (495)
.++|...+.||+|+||.||++..+ ++..||+|.+..... ....++|.+|++++++++||||++++++|..++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC-HHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 456888899999999999999863 467899999875432 2234679999999999999999999999999889
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++|+||+++|+|.+++
T Consensus 83 ~~lv~e~~~~~~L~~~l 99 (288)
T cd05050 83 MCLLFEYMAYGDLNEFL 99 (288)
T ss_pred cEEEEecCCCCCHHHHH
Confidence 99999999999999886
No 127
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.05 E-value=4.4e-10 Score=109.32 Aligned_cols=97 Identities=19% Similarity=0.368 Sum_probs=79.9
Q ss_pred ccHHHHHHhccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEE
Q 040888 395 FSMADLLTATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFC 472 (495)
Q Consensus 395 ~~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~ 472 (495)
+.++.+..++++|...+.||+|+||.||++.. .+++.+|+|.+.... ....++.+|+.++.++ +||||++++++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 34566677888999999999999999999987 458899999886432 1245688899999999 699999999998
Q ss_pred Ee-----CCEEEEEEEecCCCCHhhhh
Q 040888 473 SE-----QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 473 ~~-----~~~~~lv~ey~~~GsL~~~L 494 (495)
.. ++..++||||+++|+|.+++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l 111 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLV 111 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHH
Confidence 53 35689999999999998765
No 128
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.05 E-value=3.8e-10 Score=109.40 Aligned_cols=89 Identities=26% Similarity=0.567 Sum_probs=75.8
Q ss_pred cCCcccceeccCCceEEEEEEcCC------CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD------GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
++|...+.||+|+||.||+|...+ +..||||.+..... ....+.|.+|++++.+++|+||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC-HHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 346667899999999999998632 47899999875432 22356899999999999999999999999999999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+++|+|.+++
T Consensus 84 ~lv~e~~~~~~L~~~i 99 (280)
T cd05049 84 IMVFEYMEHGDLNKFL 99 (280)
T ss_pred EEEEecCCCCCHHHHH
Confidence 9999999999999886
No 129
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.04 E-value=8e-10 Score=105.60 Aligned_cols=89 Identities=26% Similarity=0.447 Sum_probs=76.3
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|+..+.||+|+||.+|++.. .+|+.||+|++..........+++.+|++++++++||||+++.+++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 366778999999999999987 4688999999875433223356789999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 81 ~~~~~l~~~~ 90 (256)
T cd08218 81 CEGGDLYKKI 90 (256)
T ss_pred CCCCcHHHHH
Confidence 9999998875
No 130
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.04 E-value=2.1e-10 Score=116.01 Aligned_cols=88 Identities=31% Similarity=0.557 Sum_probs=73.6
Q ss_pred CCcccceeccCCceEEEEEEcCC---C--CEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPD---G--KVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~---g--~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
.....++||+|.||.||+|++.+ | .-||||..+.+... ...+.|..|.-+|+.++|||||+|+|.|.+. ..++
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~-d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wi 467 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP-DDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWI 467 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh-hhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeE
Confidence 34456889999999999999832 3 36899998765432 3367899999999999999999999999864 5799
Q ss_pred EEEecCCCCHhhhhC
Q 040888 481 IYDYYRNGSLHEFLH 495 (495)
Q Consensus 481 v~ey~~~GsL~~~L~ 495 (495)
|||.++-|.|..||+
T Consensus 468 vmEL~~~GELr~yLq 482 (974)
T KOG4257|consen 468 VMELAPLGELREYLQ 482 (974)
T ss_pred EEecccchhHHHHHH
Confidence 999999999999974
No 131
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.04 E-value=7.4e-10 Score=106.20 Aligned_cols=86 Identities=24% Similarity=0.457 Sum_probs=74.3
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
++|...+.||+|+||.||+|..++++.||+|.+..... ..++|.+|++++++++|+|++++++++. .+..++++||
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM---SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC---cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 45677789999999999999998899999999875432 2467999999999999999999999874 4568999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 82 ~~~~~L~~~~ 91 (260)
T cd05067 82 MENGSLVDFL 91 (260)
T ss_pred CCCCCHHHHH
Confidence 9999998875
No 132
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.04 E-value=9.2e-10 Score=105.10 Aligned_cols=88 Identities=26% Similarity=0.488 Sum_probs=75.3
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc---cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ---RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
|...+.||+|+||.||+|+.. ++..|++|.+...... ....+.+.+|++++++++|+||+++.+++...+..++|+
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 556788999999999999985 7899999998653221 123467899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++++|.+++
T Consensus 82 e~~~~~~L~~~~ 93 (258)
T cd06632 82 ELVPGGSLAKLL 93 (258)
T ss_pred EecCCCcHHHHH
Confidence 999999998876
No 133
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.04 E-value=1.2e-10 Score=111.28 Aligned_cols=81 Identities=27% Similarity=0.439 Sum_probs=64.9
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE-----EEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH-----NIL 480 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~-----~~l 480 (495)
|...+++|+|+||.||+|++. .+..||||+...+... --+|.++|++++|||||+|.-++....+ ..+
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~------knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY------KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc------CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 445689999999999999984 4789999998765321 2368999999999999999999876432 248
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
|+||||. +|.+++
T Consensus 100 VleymP~-tL~~~~ 112 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVI 112 (364)
T ss_pred HHHhchH-HHHHHH
Confidence 9999997 787765
No 134
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.04 E-value=3.7e-10 Score=113.23 Aligned_cols=90 Identities=23% Similarity=0.496 Sum_probs=73.5
Q ss_pred cCCcccceeccCCceEEEEEEc------CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeC-C
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY------PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQ-G 476 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~-~ 476 (495)
++|...+.||+|+||.||+|.. .+++.||||.++.... ....+.+.+|++++.++ +||||++++++|... .
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC-hHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 4677789999999999999973 3477999999975432 12245788999999999 689999999998754 4
Q ss_pred EEEEEEEecCCCCHhhhhC
Q 040888 477 HNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L~ 495 (495)
..++|+||+++|+|.++++
T Consensus 86 ~~~lv~ey~~~g~L~~~i~ 104 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLR 104 (343)
T ss_pred ceEEEEeccCCCcHHHHHH
Confidence 6789999999999998863
No 135
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.03 E-value=4.9e-10 Score=109.73 Aligned_cols=89 Identities=27% Similarity=0.484 Sum_probs=74.2
Q ss_pred cCCcccceeccCCceEEEEEEcCC---------------CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD---------------GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELV 469 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~---------------g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~ 469 (495)
++|...+.||+|+||.||++...+ ...||+|.++.... ....+.|.+|++++.+++|+|+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 356777899999999999987632 23589999875422 22346799999999999999999999
Q ss_pred EEEEeCCEEEEEEEecCCCCHhhhh
Q 040888 470 GFCSEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 470 g~~~~~~~~~lv~ey~~~GsL~~~L 494 (495)
+++...+..++||||+++|+|.+++
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l 108 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFL 108 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHH
Confidence 9999999999999999999998876
No 136
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.03 E-value=7.3e-10 Score=110.10 Aligned_cols=84 Identities=23% Similarity=0.446 Sum_probs=71.0
Q ss_pred ceeccCCceEEEEEEc----CCCCEEEEEEecCcccc--cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 411 RLLGEGTIGRVYRAKY----PDGKVLAVKKIDSSHFQ--RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+.||+|+||.||+++. ..++.||||.+...... ......+.+|++++.+++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999985 35789999999754221 12235678999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 82 ~~~~~L~~~~ 91 (323)
T cd05584 82 LSGGELFMHL 91 (323)
T ss_pred CCCchHHHHH
Confidence 9999998875
No 137
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.03 E-value=9e-10 Score=107.08 Aligned_cols=88 Identities=28% Similarity=0.522 Sum_probs=73.0
Q ss_pred cCCcccceeccCCceEEEEEEcC-----CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-----DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GH 477 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~ 477 (495)
.+|...+.||+|+||.||++.++ ++..||+|++..... ...+.|.+|++++.+++||||+++++++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH--HHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 35667789999999999999852 578999999865432 2356789999999999999999999988643 46
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++|+||+++|+|.+++
T Consensus 82 ~~lv~e~~~~~~L~~~l 98 (284)
T cd05081 82 LRLVMEYLPYGSLRDYL 98 (284)
T ss_pred eEEEEEecCCCCHHHHH
Confidence 78999999999999886
No 138
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.03 E-value=1e-09 Score=107.13 Aligned_cols=88 Identities=22% Similarity=0.396 Sum_probs=74.3
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|... ++..||+|.++..... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 45777899999999999999874 6889999998754321 224567899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|++ |+|.+++
T Consensus 84 ~~~-~~l~~~l 93 (288)
T cd07871 84 YLD-SDLKQYL 93 (288)
T ss_pred CCC-cCHHHHH
Confidence 997 4888765
No 139
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.03 E-value=1.5e-09 Score=105.36 Aligned_cols=87 Identities=20% Similarity=0.253 Sum_probs=74.5
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|+..+.||+|+||.||+|+. .+++.||+|.+..... ....++|.+|++++.+++||||++++++|...+..++|+||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 566778999999999999987 5688999999865422 22346799999999999999999999999999999999999
Q ss_pred cCCCCHhhh
Q 040888 485 YRNGSLHEF 493 (495)
Q Consensus 485 ~~~GsL~~~ 493 (495)
+++|+|..+
T Consensus 81 ~~~~~l~~~ 89 (279)
T cd06619 81 MDGGSLDVY 89 (279)
T ss_pred CCCCChHHh
Confidence 999998754
No 140
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.03 E-value=1.1e-09 Score=104.38 Aligned_cols=89 Identities=21% Similarity=0.380 Sum_probs=77.0
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|+||.||++.. .+++.+|+|++..........+.+.+|++++++++|||++++++.+..++..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 366778999999999999987 4688999999876543333456799999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 81 ~~~~~L~~~~ 90 (256)
T cd08220 81 APGGTLAEYI 90 (256)
T ss_pred CCCCCHHHHH
Confidence 9999998876
No 141
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.03 E-value=9.9e-10 Score=106.04 Aligned_cols=89 Identities=26% Similarity=0.494 Sum_probs=73.6
Q ss_pred CcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc--------ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR--------ANSESFSEIVQNISRIRHTNIAELVGFCSEQGH 477 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~--------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (495)
|...+.||+|+||.||+|.. .+|+.||+|.++...... ...+.+.+|++++.+++|+|++++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 45578999999999999987 468899999886421110 113468889999999999999999999999999
Q ss_pred EEEEEEecCCCCHhhhhC
Q 040888 478 NILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L~ 495 (495)
.++|+||+++|+|.++++
T Consensus 83 ~~lv~e~~~~~~L~~~l~ 100 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLR 100 (272)
T ss_pred eEEEEecCCCCcHHHHHh
Confidence 999999999999988763
No 142
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.02 E-value=9.8e-10 Score=105.04 Aligned_cols=86 Identities=24% Similarity=0.499 Sum_probs=75.8
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
++|...+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++.+++|+||+++++++......++|+||
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 45677899999999999999874 78899999976432 356899999999999999999999999988899999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 82 ~~~~~L~~~~ 91 (256)
T cd05039 82 MAKGSLVDYL 91 (256)
T ss_pred cCCCcHHHHH
Confidence 9999999876
No 143
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.02 E-value=6.6e-10 Score=106.13 Aligned_cols=89 Identities=24% Similarity=0.461 Sum_probs=76.4
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|+||.||++..+ +|..+|+|.+..........+.+.+|++++++++|+|++++++++......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 3666789999999999999985 588999999876433223356788999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++++|.+++
T Consensus 81 ~~~~~L~~~~ 90 (257)
T cd08225 81 CDGGDLMKRI 90 (257)
T ss_pred CCCCcHHHHH
Confidence 9999998875
No 144
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.02 E-value=9.5e-10 Score=106.90 Aligned_cols=82 Identities=20% Similarity=0.301 Sum_probs=69.5
Q ss_pred eccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCCH
Q 040888 413 LGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGSL 490 (495)
Q Consensus 413 iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 490 (495)
||+|+||+||++... +++.||+|++....... ...+.+..|++++++++|+||+++.+++..+...++|||||++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999874 68899999987543221 1235678899999999999999999999999999999999999999
Q ss_pred hhhh
Q 040888 491 HEFL 494 (495)
Q Consensus 491 ~~~L 494 (495)
.+++
T Consensus 81 ~~~~ 84 (280)
T cd05608 81 RYHI 84 (280)
T ss_pred HHHH
Confidence 8664
No 145
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.01 E-value=1.3e-09 Score=106.24 Aligned_cols=88 Identities=18% Similarity=0.309 Sum_probs=74.1
Q ss_pred CcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
|...+.||+|+||+||++.. .+++.||+|.+....... ...+.+.+|++++.+++|+|++++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 45568899999999999987 468899999987543221 1234578899999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 82 ~~~~~L~~~~ 91 (285)
T cd05632 82 MNGGDLKFHI 91 (285)
T ss_pred ccCccHHHHH
Confidence 9999998765
No 146
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.01 E-value=1.2e-09 Score=108.93 Aligned_cols=84 Identities=13% Similarity=0.256 Sum_probs=70.9
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
++||+|+||.||++... +++.||||.++...... ...+.+.+|..++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999984 58899999997643221 2245688899999888 799999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 81 g~L~~~~ 87 (329)
T cd05588 81 GDLMFHM 87 (329)
T ss_pred CCHHHHH
Confidence 9998765
No 147
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.01 E-value=1.5e-09 Score=106.81 Aligned_cols=89 Identities=21% Similarity=0.376 Sum_probs=74.5
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|... +++.||||++...... .....+.+|++++++++||||+++++++..++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 356888899999999999999985 6889999998754321 22346788999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||++ |+|.+++
T Consensus 83 e~~~-~~l~~~~ 93 (303)
T cd07869 83 EYVH-TDLCQYM 93 (303)
T ss_pred ECCC-cCHHHHH
Confidence 9996 5776654
No 148
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.01 E-value=1.1e-09 Score=105.57 Aligned_cols=88 Identities=27% Similarity=0.537 Sum_probs=72.0
Q ss_pred CcccceeccCCceEEEEEEcCC----CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE-----
Q 040888 407 FATGRLLGEGTIGRVYRAKYPD----GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH----- 477 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~----- 477 (495)
|...+.||+|+||.||+|.... +..||+|+++.........+.+.+|++.+++++|||++++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 3457889999999999998742 3689999987643332334679999999999999999999999876554
Q ss_pred -EEEEEEecCCCCHhhhh
Q 040888 478 -NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 -~~lv~ey~~~GsL~~~L 494 (495)
.++|+||+++|+|.+++
T Consensus 81 ~~~~v~e~~~~~~l~~~l 98 (273)
T cd05035 81 KPMVILPFMKHGDLHSFL 98 (273)
T ss_pred ccEEEEeccCCCCHHHHH
Confidence 68999999999998775
No 149
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.01 E-value=1.4e-09 Score=105.99 Aligned_cols=88 Identities=19% Similarity=0.306 Sum_probs=74.4
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
|+..+.||+|+||.||++... +++.||||.+....... ...+.+..|+.++.+++|++++++.+.+..++..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 556788999999999999884 68899999987543221 1234578899999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 82 ~~g~~L~~~l 91 (285)
T cd05630 82 MNGGDLKFHI 91 (285)
T ss_pred cCCCcHHHHH
Confidence 9999998875
No 150
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.01 E-value=1.4e-09 Score=105.64 Aligned_cols=89 Identities=19% Similarity=0.393 Sum_probs=75.3
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|+....||+|+||.||+|... +|+.||+|++..........+.+.+|++++.+++|+|++++++++......++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 5677789999999999999985 589999999865432222346788999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
++++.|..++
T Consensus 82 ~~~~~l~~~~ 91 (286)
T cd07847 82 CDHTVLNELE 91 (286)
T ss_pred cCccHHHHHH
Confidence 9998887654
No 151
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.01 E-value=8e-10 Score=106.20 Aligned_cols=86 Identities=24% Similarity=0.501 Sum_probs=75.2
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|+||.||+|... .++.||+|.+.... ...+++.+|++++.+++|+||++++++|..++..++||||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 4666789999999999999985 58899999987542 2246799999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 84 ~~~~~L~~~~ 93 (263)
T cd05052 84 MTYGNLLDYL 93 (263)
T ss_pred CCCCcHHHHH
Confidence 9999999875
No 152
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.01 E-value=1.2e-09 Score=104.26 Aligned_cols=86 Identities=23% Similarity=0.542 Sum_probs=75.6
Q ss_pred CCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
+|...+.||+|+||.||++...++..+|+|.+..... ...+|.+|++++++++|||++++++++......++|+||+
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM---SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC---CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 4666789999999999999987788999999875432 2467999999999999999999999999999999999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
++|+|.+++
T Consensus 82 ~~~~L~~~~ 90 (256)
T cd05112 82 EHGCLSDYL 90 (256)
T ss_pred CCCcHHHHH
Confidence 999998876
No 153
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.01 E-value=1.1e-09 Score=108.84 Aligned_cols=88 Identities=24% Similarity=0.400 Sum_probs=70.4
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHH---HhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQN---ISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~---l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
|...+.||+|+||.||+|... +++.||||++...... ....+.+.+|+++ +++++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 445688999999999999874 6899999999754321 1223456666554 4677899999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|..++
T Consensus 81 ~E~~~~~~L~~~~ 93 (324)
T cd05589 81 MEYAAGGDLMMHI 93 (324)
T ss_pred EcCCCCCcHHHHh
Confidence 9999999998765
No 154
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.01 E-value=1.2e-09 Score=105.40 Aligned_cols=82 Identities=23% Similarity=0.388 Sum_probs=68.7
Q ss_pred eeccCCceEEEEEEcCC---CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCC
Q 040888 412 LLGEGTIGRVYRAKYPD---GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNG 488 (495)
Q Consensus 412 ~iG~G~~g~Vy~~~~~~---g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 488 (495)
.||+|+||.||+|...+ ...+|+|.+..... ......|.+|++.++.++|+||++++++|......++||||+++|
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT-PDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCC-hHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 58999999999997633 45788888764322 223467899999999999999999999999999999999999999
Q ss_pred CHhhhh
Q 040888 489 SLHEFL 494 (495)
Q Consensus 489 sL~~~L 494 (495)
+|.+++
T Consensus 81 ~L~~~l 86 (269)
T cd05042 81 DLKNYL 86 (269)
T ss_pred cHHHHH
Confidence 999876
No 155
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.01 E-value=7.8e-10 Score=107.18 Aligned_cols=90 Identities=27% Similarity=0.416 Sum_probs=76.2
Q ss_pred ccCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH 477 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (495)
+++|...+.||+|+||.||+|... .+..||+|.+..... ......|.+|+.++++++|+||+++++++.+.+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS-EQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 456788899999999999999884 356789998864322 2224579999999999999999999999999889
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+++|+|.+++
T Consensus 84 ~~lv~e~~~g~~L~~~i 100 (277)
T cd05036 84 RFILLELMAGGDLKSFL 100 (277)
T ss_pred cEEEEecCCCCCHHHHH
Confidence 99999999999999876
No 156
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.01 E-value=1.8e-09 Score=104.93 Aligned_cols=88 Identities=23% Similarity=0.426 Sum_probs=74.3
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|++|.||+|+.. ++..||+|++..........+.+.+|+.++.+++||||+++++++..++..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4666789999999999999984 689999999875433223346788999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
++ |+|.+++
T Consensus 81 ~~-~~l~~~~ 89 (285)
T cd07861 81 LS-MDLKKYL 89 (285)
T ss_pred CC-CCHHHHH
Confidence 97 6887765
No 157
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.01 E-value=1.4e-09 Score=108.26 Aligned_cols=84 Identities=21% Similarity=0.301 Sum_probs=71.4
Q ss_pred ceeccCCceEEEEEEc-CCCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCC
Q 040888 411 RLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNG 488 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 488 (495)
+.||+|+||.||++.. .+|..||+|.+...... ......+..|++++.+++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4689999999999987 46899999999754321 122456788999999999999999999999999999999999999
Q ss_pred CHhhhh
Q 040888 489 SLHEFL 494 (495)
Q Consensus 489 sL~~~L 494 (495)
+|.+++
T Consensus 81 ~L~~~l 86 (325)
T cd05594 81 ELFFHL 86 (325)
T ss_pred cHHHHH
Confidence 998765
No 158
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.00 E-value=1.9e-10 Score=117.78 Aligned_cols=85 Identities=25% Similarity=0.442 Sum_probs=73.7
Q ss_pred ccceeccCCceEEEEEEcC--CCC--EEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 409 TGRLLGEGTIGRVYRAKYP--DGK--VLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 409 ~~~~iG~G~~g~Vy~~~~~--~g~--~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
..++||+|.||.|++|.+. .|+ .||||+++.+.... ...+|++|+..|.+++|+|+++|+|...+ ...++|+|.
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 4588999999999999984 455 67999998765432 46789999999999999999999999987 667899999
Q ss_pred cCCCCHhhhhC
Q 040888 485 YRNGSLHEFLH 495 (495)
Q Consensus 485 ~~~GsL~~~L~ 495 (495)
++.|+|.+.||
T Consensus 192 aplGSLldrLr 202 (1039)
T KOG0199|consen 192 APLGSLLDRLR 202 (1039)
T ss_pred cccchHHHHHh
Confidence 99999999875
No 159
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.00 E-value=8.1e-10 Score=107.02 Aligned_cols=87 Identities=32% Similarity=0.587 Sum_probs=72.8
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC--EEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG--HNILIY 482 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~ 482 (495)
++...+.||+|+||.||.+... +|...|||.+...... ..+.+.+|+++|.+++|||||+.+|.....+ ...+.|
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 3455789999999999999985 4999999998765221 1567899999999999999999999865555 578999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 96 Ey~~~GsL~~~~ 107 (313)
T KOG0198|consen 96 EYAPGGSLSDLI 107 (313)
T ss_pred eccCCCcHHHHH
Confidence 999999999875
No 160
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.00 E-value=1.7e-09 Score=106.15 Aligned_cols=88 Identities=18% Similarity=0.319 Sum_probs=76.6
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.+|...+.||+|+||.||+|+. .+++.||+|.+..... ...+.+.+|+.+++.++|+|+++++++|..++..++|||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 96 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 96 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence 4577789999999999999996 5689999999865432 224678899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 97 ~~~~~~L~~~~ 107 (297)
T cd06656 97 YLAGGSLTDVV 107 (297)
T ss_pred ccCCCCHHHHH
Confidence 99999998875
No 161
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.00 E-value=1.1e-09 Score=105.57 Aligned_cols=89 Identities=22% Similarity=0.483 Sum_probs=75.3
Q ss_pred cCCcccceeccCCceEEEEEEcC-CC---CEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DG---KVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g---~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
++|...+.||+|+||.||+|... ++ ..+|+|.+..... ....++|..|++++.+++|+|++++.+++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT-EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 46777899999999999999874 23 3799999865422 2235679999999999999999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 84 v~e~~~~~~L~~~~ 97 (268)
T cd05063 84 ITEYMENGALDKYL 97 (268)
T ss_pred EEEcCCCCCHHHHH
Confidence 99999999998876
No 162
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.00 E-value=2.1e-09 Score=103.09 Aligned_cols=90 Identities=26% Similarity=0.451 Sum_probs=76.7
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc---ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR---ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
++|...+.||+|++|.||+|.. .++..+|+|.+....... ...+.+.+|++++.+++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688889999999999999987 468999999986542211 123568899999999999999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
|+||+++|+|.+++
T Consensus 82 v~e~~~~~~l~~~~ 95 (263)
T cd06625 82 FMEYMPGGSVKDQL 95 (263)
T ss_pred EEEECCCCcHHHHH
Confidence 99999999998875
No 163
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.00 E-value=2.8e-10 Score=101.17 Aligned_cols=121 Identities=27% Similarity=0.343 Sum_probs=52.3
Q ss_pred CEeEEEcCCCCCccccccccC-CCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhc-cCCCCCcEEEcc
Q 040888 70 SVTEIKLSGLGLNGQLGYQLT-NLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSI-SQMSELKYLNLG 147 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~L~ 147 (495)
++++|+|.+|.++-. +.++ .+++|+.|||++|.++..-.....+.|+.|+|++|+++. ++..+ ..+++|+.|+|+
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~L~ 96 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKLEGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELYLS 96 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S--TT----TT--EEE--SS---S--CHHHHHH-TT--EEE-T
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCccccCccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEECc
Confidence 678999999999853 3465 588999999999999854333333899999999999994 54444 468999999999
Q ss_pred cCcCCCccc-hhhhCCCCCcEEEccCCcCCCcCcc----cccCCCCCCEEec
Q 040888 148 SNQLNGQLS-DMFQKNEKLETLDLSKNQLTGELPR----SFASLSSLKKLYL 194 (495)
Q Consensus 148 ~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~----~~~~l~~L~~L~l 194 (495)
+|+|...-. ..+..+++|+.|+|.+|.++.. +. -+..+++|+.||-
T Consensus 97 ~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 97 NNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp TS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred CCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 999975322 4577899999999999999843 32 3567889999873
No 164
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.00 E-value=1.2e-09 Score=106.69 Aligned_cols=97 Identities=23% Similarity=0.413 Sum_probs=81.4
Q ss_pred ccHHHHHHhccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEE
Q 040888 395 FSMADLLTATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFC 472 (495)
Q Consensus 395 ~~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~ 472 (495)
++++++..++++|...+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.++.++ +|||+++++++|
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 45577778899999999999999999999987 468899999986532 1245678899999998 899999999999
Q ss_pred EeCC-----EEEEEEEecCCCCHhhhh
Q 040888 473 SEQG-----HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 473 ~~~~-----~~~lv~ey~~~GsL~~~L 494 (495)
...+ ..++|+||+++|+|.+++
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~ 115 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELV 115 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHH
Confidence 7643 578999999999998865
No 165
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.00 E-value=1.3e-09 Score=106.33 Aligned_cols=89 Identities=25% Similarity=0.395 Sum_probs=76.5
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+|...+.||+|+||.||++... +++.||+|.+...... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 5777899999999999999984 5899999998654321 1224678899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 82 ~~~~~~L~~~~ 92 (290)
T cd05580 82 YVPGGELFSHL 92 (290)
T ss_pred cCCCCCHHHHH
Confidence 99999998876
No 166
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.00 E-value=1.1e-09 Score=105.40 Aligned_cols=86 Identities=23% Similarity=0.471 Sum_probs=73.0
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
++|...+.||+|+||.||+|...+...||+|++..... ..++|.+|++++.+++|+||+++++++. .+..++||||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY 81 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc---CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence 45677889999999999999987777899999975332 2467999999999999999999999875 4557899999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 82 ~~~~~L~~~~ 91 (262)
T cd05071 82 MSKGSLLDFL 91 (262)
T ss_pred CCCCcHHHHH
Confidence 9999999876
No 167
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.00 E-value=9e-10 Score=106.86 Aligned_cols=88 Identities=23% Similarity=0.339 Sum_probs=76.3
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||++... ++..+|+|.+..... ...+.|.+|++++++++|+|++++++++..++..++|||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESE--EELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCH--HHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 45677788999999999999984 588999999865422 234679999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 83 ~~~~~~L~~~~ 93 (280)
T cd06611 83 FCDGGALDSIM 93 (280)
T ss_pred ccCCCcHHHHH
Confidence 99999998875
No 168
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.00 E-value=9e-10 Score=121.01 Aligned_cols=93 Identities=14% Similarity=0.289 Sum_probs=77.5
Q ss_pred HhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEE
Q 040888 402 TATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHN 478 (495)
Q Consensus 402 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~ 478 (495)
...++|.....||+|+||.||++... .+..||+|.+............|..|+.++.+++|||||++++++... ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34567888999999999999999984 577899999875443333356789999999999999999999988653 568
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+++|+|.++|
T Consensus 90 yIVMEY~~gGSL~~lL 105 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNI 105 (1021)
T ss_pred EEEEeCCCCCcHHHHH
Confidence 8999999999998876
No 169
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.00 E-value=9e-10 Score=109.02 Aligned_cols=89 Identities=19% Similarity=0.440 Sum_probs=72.4
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCC----EEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGK----VLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~----~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
.+|+..+.||+|+||.||+|++. ++. .||+|.+..... ....++|.+|+.+++.++||||++++|+|... ..+
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 35778899999999999999863 333 489999865322 22356799999999999999999999999865 467
Q ss_pred EEEEecCCCCHhhhhC
Q 040888 480 LIYDYYRNGSLHEFLH 495 (495)
Q Consensus 480 lv~ey~~~GsL~~~L~ 495 (495)
+|+||+++|+|.++++
T Consensus 85 ~v~e~~~~g~l~~~l~ 100 (316)
T cd05108 85 LITQLMPFGCLLDYVR 100 (316)
T ss_pred eeeecCCCCCHHHHHH
Confidence 9999999999998763
No 170
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.00 E-value=1.2e-09 Score=105.12 Aligned_cols=89 Identities=24% Similarity=0.473 Sum_probs=75.8
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccc----cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ----RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
+|+..+.||+|+||.||++.. .+++.||+|.+...... ....+.+.+|++++++++|+||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 467789999999999999986 56889999998653211 1124678999999999999999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
|+||+++|+|.+++
T Consensus 81 v~e~~~~~~L~~~l 94 (268)
T cd06630 81 FVEWMAGGSVSHLL 94 (268)
T ss_pred EEeccCCCcHHHHH
Confidence 99999999998876
No 171
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.00 E-value=5.5e-10 Score=108.60 Aligned_cols=89 Identities=20% Similarity=0.396 Sum_probs=75.9
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++..++..++|+||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 5677899999999999999985 588999999865433222356788999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++++|.++.
T Consensus 82 ~~~~~l~~~~ 91 (286)
T cd07846 82 VDHTVLDDLE 91 (286)
T ss_pred CCccHHHHHH
Confidence 9998887653
No 172
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.00 E-value=1.1e-09 Score=107.81 Aligned_cols=90 Identities=29% Similarity=0.500 Sum_probs=75.4
Q ss_pred cCCcccceeccCCceEEEEEEc------CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY------PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGH 477 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~ 477 (495)
++|...+.||+|+||.||++.. ..+..||||+++.... ....+.+.+|+++++++ +||||++++++|...+.
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 4678889999999999999974 2355899999875432 12246789999999999 79999999999999999
Q ss_pred EEEEEEecCCCCHhhhhC
Q 040888 478 NILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L~ 495 (495)
.++|+||+++|+|.++++
T Consensus 114 ~~lv~e~~~~~~L~~~i~ 131 (302)
T cd05055 114 ILVITEYCCYGDLLNFLR 131 (302)
T ss_pred eEEEEEcCCCCcHHHHHH
Confidence 999999999999998763
No 173
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.00 E-value=1.5e-09 Score=105.11 Aligned_cols=88 Identities=20% Similarity=0.331 Sum_probs=75.3
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
.|+..+.||+|+||.||+|... ++..||+|.+..... ....+.+.+|++++++++|+||+++++++..+...++||||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 3555688999999999999974 588999999865422 12356789999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 84 ~~~~~L~~~i 93 (277)
T cd06640 84 LGGGSALDLL 93 (277)
T ss_pred CCCCcHHHHH
Confidence 9999998876
No 174
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.00 E-value=2.2e-09 Score=103.02 Aligned_cols=89 Identities=24% Similarity=0.393 Sum_probs=77.4
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|.. .++..+|+|++....... ..+.+.+|++.+++++|+|++++++.+..++..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 3677889999999999999996 468899999987543322 35679999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++++|.+++
T Consensus 80 ~~~~~~l~~~~ 90 (267)
T cd06610 80 YLSGGSLLDIM 90 (267)
T ss_pred ccCCCcHHHHH
Confidence 99999998876
No 175
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.99 E-value=1.2e-09 Score=114.42 Aligned_cols=86 Identities=14% Similarity=0.181 Sum_probs=72.6
Q ss_pred CcccceeccCCceEEEEEEcC-C-CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-D-GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~-g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
|...+.||+|+||.||+|... + +..||+|.+..... .....+.+|++++++++|||||+++++|..++..++||||
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDE--RQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 667799999999999999863 3 67888887754321 2245678899999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.++|
T Consensus 147 ~~gg~L~~~l 156 (478)
T PTZ00267 147 GSGGDLNKQI 156 (478)
T ss_pred CCCCCHHHHH
Confidence 9999998765
No 176
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=98.99 E-value=1.4e-09 Score=106.26 Aligned_cols=88 Identities=30% Similarity=0.515 Sum_probs=73.5
Q ss_pred CCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
+|...+.||+|+||.||+|+.. ....+|+|.+..... ....+.+.+|++++++++||||++++++|..++..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS-SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC-HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 3566789999999999999852 235789998865432 122467899999999999999999999999999999
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+|+||+++|+|.+++
T Consensus 80 lv~e~~~~~~L~~~l 94 (290)
T cd05045 80 LIVEYAKYGSLRSFL 94 (290)
T ss_pred EEEEecCCCCHHHHH
Confidence 999999999999875
No 177
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=98.99 E-value=9.9e-10 Score=105.88 Aligned_cols=88 Identities=24% Similarity=0.438 Sum_probs=74.3
Q ss_pred CCcccceeccCCceEEEEEEcCC-C---CEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPD-G---KVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~-g---~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
+|...+.||+|+||.||+|.... + ..||||.+..... ....++|..|++++++++||||+++.+++..++..++|
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT-EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 45667899999999999998743 3 3699999875422 22356899999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
+||+++|+|.+++
T Consensus 84 ~e~~~~~~L~~~l 96 (269)
T cd05065 84 TEFMENGALDSFL 96 (269)
T ss_pred EecCCCCcHHHHH
Confidence 9999999998876
No 178
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=98.99 E-value=2e-09 Score=103.26 Aligned_cols=89 Identities=24% Similarity=0.472 Sum_probs=77.2
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
|+..+.||+|+||.||+|... +++.||+|.+..........+.+.+|++++++++|+||+++++++...+..++|+||+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence 566789999999999999874 6889999998765432234678999999999999999999999999999999999999
Q ss_pred CCCCHhhhhC
Q 040888 486 RNGSLHEFLH 495 (495)
Q Consensus 486 ~~GsL~~~L~ 495 (495)
++++|.++++
T Consensus 82 ~~~~L~~~~~ 91 (264)
T cd06626 82 SGGTLEELLE 91 (264)
T ss_pred CCCcHHHHHh
Confidence 9999998763
No 179
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=98.99 E-value=1.2e-09 Score=105.62 Aligned_cols=90 Identities=26% Similarity=0.489 Sum_probs=75.5
Q ss_pred cCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
++|.....||+|+||.||+|... +...|++|.+..... ....+.|.+|++++.+++|+||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD-ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc-hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 46777889999999999999863 246799998865322 11346799999999999999999999999988899
Q ss_pred EEEEEecCCCCHhhhhC
Q 040888 479 ILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L~ 495 (495)
++||||+++|+|.++++
T Consensus 84 ~lv~e~~~~~~L~~~i~ 100 (275)
T cd05046 84 YMILEYTDLGDLKQFLR 100 (275)
T ss_pred eEEEEecCCCcHHHHHH
Confidence 99999999999998863
No 180
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=98.99 E-value=1.2e-09 Score=106.16 Aligned_cols=89 Identities=27% Similarity=0.565 Sum_probs=74.8
Q ss_pred cCCcccceeccCCceEEEEEEcCC------CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD------GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
++|+..+.||+|+||.||+|.... ...||+|.+..... ....++|.+|++++.+++||||+++++++...+..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE-PKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC-HHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 356677899999999999998632 25799999875432 22346799999999999999999999999998999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
+++|||+++|+|.+++
T Consensus 84 ~~~~e~~~~~~L~~~l 99 (283)
T cd05048 84 CMLFEYLAHGDLHEFL 99 (283)
T ss_pred EEEEecCCCCcHHHHH
Confidence 9999999999999886
No 181
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=98.99 E-value=6.2e-10 Score=106.54 Aligned_cols=89 Identities=18% Similarity=0.287 Sum_probs=76.9
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+|...+.||+|+||.||+|... ++..||+|.+....... ...+.+.+|++++++++||||+++++++...+..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4667899999999999999985 58899999997543221 235689999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++++|.+++
T Consensus 81 ~~~~~~L~~~l 91 (258)
T cd05578 81 LLLGGDLRYHL 91 (258)
T ss_pred CCCCCCHHHHH
Confidence 99999998876
No 182
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=98.99 E-value=1.4e-09 Score=104.26 Aligned_cols=86 Identities=23% Similarity=0.448 Sum_probs=74.5
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
++|...+.||+|+||.||++...++..+|+|.+..... ..+.|.+|++++++++|+|++++.+++.. ...+++|||
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCChh---HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 45777899999999999999987788899998875422 24678999999999999999999999887 678999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 82 ~~~~~L~~~~ 91 (260)
T cd05073 82 MAKGSLLDFL 91 (260)
T ss_pred CCCCcHHHHH
Confidence 9999998876
No 183
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=98.99 E-value=1.6e-09 Score=103.96 Aligned_cols=86 Identities=27% Similarity=0.493 Sum_probs=73.7
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
++|+..+.||+|+||.||+|..+++..+|+|.+..... ..+.|.+|+.++++++|+|++++++++. ....+++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM---SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY 81 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC---CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence 35666789999999999999988888899999876432 2467999999999999999999999885 4567899999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 82 ~~~~~L~~~~ 91 (260)
T cd05070 82 MSKGSLLDFL 91 (260)
T ss_pred cCCCcHHHHH
Confidence 9999999876
No 184
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.99 E-value=5.6e-10 Score=111.22 Aligned_cols=90 Identities=23% Similarity=0.425 Sum_probs=78.0
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE-EEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH-NILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~-~~lv~ 482 (495)
++|...+.+|+|+||.++...++ ++..+++|.+.........++.-..|+.++++++|||||...+.+..++. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 45666789999999999988874 57899999998776554445678899999999999999999999999888 89999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
+|++||++.+.|
T Consensus 84 ~Y~eGg~l~~~i 95 (426)
T KOG0589|consen 84 EYCEGGDLAQLI 95 (426)
T ss_pred eecCCCCHHHHH
Confidence 999999998865
No 185
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=98.99 E-value=1.2e-09 Score=106.98 Aligned_cols=89 Identities=26% Similarity=0.447 Sum_probs=74.3
Q ss_pred cCCcccceeccCCceEEEEEEcC-----------------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcce
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-----------------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAE 467 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-----------------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~ 467 (495)
++|...+.||+|+||.||++... ++..||+|.+..... ....++|.+|++++.+++|+||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN-KNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcce
Confidence 45777889999999999998532 244789999875422 223567999999999999999999
Q ss_pred EEEEEEeCCEEEEEEEecCCCCHhhhh
Q 040888 468 LVGFCSEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 468 l~g~~~~~~~~~lv~ey~~~GsL~~~L 494 (495)
+++++...+..++||||+++|+|.+++
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l 110 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFL 110 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHH
Confidence 999999999999999999999999876
No 186
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.99 E-value=1.6e-11 Score=110.86 Aligned_cols=88 Identities=23% Similarity=0.375 Sum_probs=77.0
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+.|+..+.||+|.|+.||++.. ++|+.+|+|.+..........++..+|+++.+.++|||||+|...+.+..+.++|+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 4566678899999999999987 679999999887655544457889999999999999999999999999999999999
Q ss_pred ecCCCCHhh
Q 040888 484 YYRNGSLHE 492 (495)
Q Consensus 484 y~~~GsL~~ 492 (495)
+|++|+|..
T Consensus 91 ~m~G~dl~~ 99 (355)
T KOG0033|consen 91 LVTGGELFE 99 (355)
T ss_pred cccchHHHH
Confidence 999999865
No 187
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=98.99 E-value=1.2e-09 Score=107.36 Aligned_cols=90 Identities=27% Similarity=0.559 Sum_probs=74.0
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCC--EEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGK--VLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~--~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 480 (495)
++|+..+.||+|+||.||+|... ++. .+|+|.+.... .....+.|.+|++++.++ +|+||+++++++..++..++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC-CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 46777899999999999999974 454 45787775432 122346788999999999 89999999999999999999
Q ss_pred EEEecCCCCHhhhhC
Q 040888 481 IYDYYRNGSLHEFLH 495 (495)
Q Consensus 481 v~ey~~~GsL~~~L~ 495 (495)
|+||+++|+|.++++
T Consensus 86 v~e~~~~~~L~~~l~ 100 (303)
T cd05088 86 AIEYAPHGNLLDFLR 100 (303)
T ss_pred EEEeCCCCcHHHHHH
Confidence 999999999998763
No 188
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.98 E-value=2.5e-09 Score=104.89 Aligned_cols=88 Identities=17% Similarity=0.318 Sum_probs=76.2
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.+|...+.||+|+||.||+|+. .+++.||+|.+...... ..+.+.+|+.++++++|+|++++++++..++..++|||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e 97 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence 3566778899999999999986 46889999998754322 24678899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 98 ~~~~~~L~~~~ 108 (296)
T cd06654 98 YLAGGSLTDVV 108 (296)
T ss_pred ccCCCCHHHHH
Confidence 99999999875
No 189
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=98.98 E-value=6.4e-10 Score=107.74 Aligned_cols=87 Identities=23% Similarity=0.361 Sum_probs=74.0
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
|+..+.||+|+||.||+|... ++..||+|.+...... ...+.+.+|++++++++||||+++++++..++..++|+||+
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccch-HHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 444577999999999999874 5789999998754322 23467899999999999999999999999999999999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
++|+|.+++
T Consensus 85 ~~~~L~~~~ 93 (277)
T cd06642 85 GGGSALDLL 93 (277)
T ss_pred CCCcHHHHh
Confidence 999998875
No 190
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=98.98 E-value=2.8e-09 Score=101.86 Aligned_cols=88 Identities=20% Similarity=0.372 Sum_probs=75.1
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|+||.||++... ++..+|+|.++..... ...+.+.+|+.++++++|+||+++.+++..++..++||||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS-SAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch-HHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 3566789999999999999874 5889999998643321 2346788999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 80 ~~~~~l~~~~ 89 (255)
T cd08219 80 CDGGDLMQKI 89 (255)
T ss_pred CCCCcHHHHH
Confidence 9999998765
No 191
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=98.98 E-value=2e-09 Score=104.49 Aligned_cols=82 Identities=21% Similarity=0.331 Sum_probs=69.0
Q ss_pred eccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCCH
Q 040888 413 LGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGSL 490 (495)
Q Consensus 413 iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 490 (495)
||+|+||.||++... +|+.+|+|++....... ...+.+..|++++.+++||||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999874 58999999997543221 1234566799999999999999999999999999999999999999
Q ss_pred hhhh
Q 040888 491 HEFL 494 (495)
Q Consensus 491 ~~~L 494 (495)
.+++
T Consensus 81 ~~~~ 84 (277)
T cd05607 81 KYHI 84 (277)
T ss_pred HHHH
Confidence 8765
No 192
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=98.98 E-value=2e-09 Score=107.25 Aligned_cols=84 Identities=13% Similarity=0.279 Sum_probs=69.9
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||.||++... +++.||+|.+....... ...+.+.+|+.++.++ +|||||++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999974 58899999997643221 2245677888888776 899999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 81 ~~L~~~~ 87 (329)
T cd05618 81 GDLMFHM 87 (329)
T ss_pred CCHHHHH
Confidence 9998765
No 193
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.98 E-value=9e-10 Score=107.21 Aligned_cols=88 Identities=19% Similarity=0.279 Sum_probs=75.7
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|+..+.||+|+||.||++... ++..||+|.+..... ....+.+.+|++++.+++|+||+++++++...+..++|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD-ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 4666789999999999999985 689999999865321 22246789999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++++|.+++
T Consensus 81 ~~~~~l~~~~ 90 (286)
T cd06622 81 MDAGSLDKLY 90 (286)
T ss_pred cCCCCHHHHH
Confidence 9999998875
No 194
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.98 E-value=2.1e-09 Score=104.75 Aligned_cols=88 Identities=18% Similarity=0.256 Sum_probs=73.6
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHNILIY 482 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 482 (495)
+|...+.||.|++|.||++... +++.+|+|.+...... ....++.+|++++++++||||++++++|... ...++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP-DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch-HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 5677889999999999999984 5889999998754321 2356789999999999999999999998654 3678999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 e~~~~~~L~~~l 92 (287)
T cd06621 81 EYCEGGSLDSIY 92 (287)
T ss_pred EecCCCCHHHHH
Confidence 999999998764
No 195
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=98.98 E-value=2.6e-09 Score=102.36 Aligned_cols=88 Identities=22% Similarity=0.421 Sum_probs=77.8
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|++|.||+++.. +++.|+||++...... ...+.+.+|++.+.+++|+|++++++++...+..++|+||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 5777899999999999999986 4899999998765332 2357899999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++++|.+++
T Consensus 81 ~~~~~L~~~l 90 (264)
T cd06623 81 MDGGSLADLL 90 (264)
T ss_pred cCCCcHHHHH
Confidence 9999999876
No 196
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=98.98 E-value=1.5e-09 Score=105.88 Aligned_cols=88 Identities=28% Similarity=0.603 Sum_probs=74.5
Q ss_pred cCCcccceeccCCceEEEEEEc------CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY------PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
++|...+.||+|+||.||++.. .++..+|+|.+.... ....+.|.+|++++.+++||||++++++|...+..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 82 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 4567789999999999999974 234578999986542 22356799999999999999999999999999999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+++|+|.+++
T Consensus 83 ~lv~e~~~~~~L~~~i 98 (288)
T cd05093 83 IMVFEYMKHGDLNKFL 98 (288)
T ss_pred EEEEEcCCCCCHHHHH
Confidence 9999999999998876
No 197
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=98.98 E-value=1.1e-09 Score=104.83 Aligned_cols=88 Identities=25% Similarity=0.455 Sum_probs=73.2
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCC-cceEEEEEEeCC------E
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTN-IAELVGFCSEQG------H 477 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~n-iv~l~g~~~~~~------~ 477 (495)
.|...++||+|.||+||+|+. .+|+.||+|+++......+....-.+|+.++.+++|+| ||+|.+++...+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 345557799999999999987 56899999999876443333456789999999999999 999999999877 7
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++|+||++. +|.+++
T Consensus 92 l~lvfe~~d~-DL~~ym 107 (323)
T KOG0594|consen 92 LYLVFEFLDR-DLKKYM 107 (323)
T ss_pred EEEEEEeecc-cHHHHH
Confidence 8899999975 787765
No 198
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=98.98 E-value=2.1e-09 Score=105.75 Aligned_cols=89 Identities=18% Similarity=0.304 Sum_probs=76.4
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+|...+.||+|+||.||++... .++.||+|.+...... ....+.+.+|++++..++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 6777899999999999999984 5889999998754321 1224578899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 82 ~~~g~~L~~~l 92 (305)
T cd05609 82 YVEGGDCATLL 92 (305)
T ss_pred cCCCCcHHHHH
Confidence 99999999876
No 199
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.98 E-value=2.7e-11 Score=121.32 Aligned_cols=144 Identities=30% Similarity=0.437 Sum_probs=101.7
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
..++.|+|+.|+++ .+|..++.|+ |+.|-+++|+++ .+|..+. ..|..||.+.|.+. .+|..++.+.+|+.|++
T Consensus 121 ~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~v 196 (722)
T KOG0532|consen 121 EALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNV 196 (722)
T ss_pred hHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHH
Confidence 45677777777776 4566677765 778888888776 5666665 67777788888877 67777888888888888
Q ss_pred ccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc----CcEEEeecC
Q 040888 147 GSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP----LDELNVENN 219 (495)
Q Consensus 147 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~----L~~l~l~~N 219 (495)
..|++. .+|+.+..+ .|..||+|.|+++ .||..|.+|+.|++|-|.+|.|...+..+.... .++|+..-.
T Consensus 197 rRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 197 RRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred hhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCChHHHHhccceeeeeeecchhc
Confidence 888877 455556544 4777888888887 778888888888888888888776664332221 455665544
No 200
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.98 E-value=2e-09 Score=104.58 Aligned_cols=87 Identities=21% Similarity=0.374 Sum_probs=75.6
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
|...+.||+|+||.||+|... +|+.||+|++..........+.+.+|++++++++||||+++++++..+...++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM 81 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence 566788999999999999974 6899999998765432333567999999999999999999999999999999999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
+++|.+++
T Consensus 82 -~~~L~~~~ 89 (286)
T cd07832 82 -PSDLSEVL 89 (286)
T ss_pred -CCCHHHHH
Confidence 99998875
No 201
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.97 E-value=1.6e-09 Score=106.04 Aligned_cols=88 Identities=23% Similarity=0.461 Sum_probs=74.7
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc---cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ---RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
|...+.||+|+||.||+|... +++.||||++...... ......+..|++++.+++|+||+++++++...+..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 566788999999999999974 6899999999765432 122456778999999999999999999999999999999
Q ss_pred EecCCCCHhhhhC
Q 040888 483 DYYRNGSLHEFLH 495 (495)
Q Consensus 483 ey~~~GsL~~~L~ 495 (495)
||+ +|+|.++++
T Consensus 82 e~~-~~~L~~~i~ 93 (298)
T cd07841 82 EFM-ETDLEKVIK 93 (298)
T ss_pred ccc-CCCHHHHHh
Confidence 999 899988763
No 202
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=98.97 E-value=1.6e-09 Score=104.52 Aligned_cols=83 Identities=22% Similarity=0.413 Sum_probs=68.1
Q ss_pred eeccCCceEEEEEEcCCC---CEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCC
Q 040888 412 LLGEGTIGRVYRAKYPDG---KVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNG 488 (495)
Q Consensus 412 ~iG~G~~g~Vy~~~~~~g---~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 488 (495)
.||+|+||.||+|...++ ..+++|.+..... ....+.|.+|+++++.++||||++++++|......++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS-SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC-hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 589999999999976432 3566777654322 123568999999999999999999999999999999999999999
Q ss_pred CHhhhhC
Q 040888 489 SLHEFLH 495 (495)
Q Consensus 489 sL~~~L~ 495 (495)
+|.++++
T Consensus 81 ~L~~~l~ 87 (268)
T cd05086 81 DLKSYLS 87 (268)
T ss_pred cHHHHHH
Confidence 9998763
No 203
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=98.97 E-value=2.2e-09 Score=103.55 Aligned_cols=87 Identities=29% Similarity=0.552 Sum_probs=69.7
Q ss_pred cccceeccCCceEEEEEEcCC-CC--EEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC------CEE
Q 040888 408 ATGRLLGEGTIGRVYRAKYPD-GK--VLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ------GHN 478 (495)
Q Consensus 408 ~~~~~iG~G~~g~Vy~~~~~~-g~--~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~------~~~ 478 (495)
...+.||+|+||.||+|+..+ +. .||+|.++.........+.|.+|++++.+++|+||++++++|... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 346889999999999999854 33 589999876433333356789999999999999999999998542 246
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++|+|||++|+|.+++
T Consensus 82 ~~v~e~~~~~~l~~~~ 97 (272)
T cd05075 82 VVILPFMKHGDLHSFL 97 (272)
T ss_pred EEEEEeCCCCcHHHHH
Confidence 8999999999998765
No 204
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=98.97 E-value=2.5e-09 Score=105.34 Aligned_cols=82 Identities=26% Similarity=0.449 Sum_probs=67.7
Q ss_pred cccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHh--cCCCCCcceEEEEEEeCC----EEEEE
Q 040888 408 ATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNIS--RIRHTNIAELVGFCSEQG----HNILI 481 (495)
Q Consensus 408 ~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~--~l~H~niv~l~g~~~~~~----~~~lv 481 (495)
....+||+|+||.||||.+. ++.||||++.... .+.|.+|-++.+ .++|+||++++++-.... +.+||
T Consensus 213 ~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~-----kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE-----KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred hhHHHhhcCccceeehhhcc-CceeEEEecCHHH-----HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 34578999999999999994 5899999997542 456777766654 579999999998876655 78899
Q ss_pred EEecCCCCHhhhhC
Q 040888 482 YDYYRNGSLHEFLH 495 (495)
Q Consensus 482 ~ey~~~GsL~~~L~ 495 (495)
+||-++|+|.+||.
T Consensus 287 t~fh~kGsL~dyL~ 300 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLK 300 (534)
T ss_pred eeeccCCcHHHHHH
Confidence 99999999999974
No 205
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=98.97 E-value=2.5e-09 Score=103.40 Aligned_cols=89 Identities=26% Similarity=0.382 Sum_probs=76.4
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||.|+||.||+|... +++.||+|.+..... ......+.+|++++++++|+|++++.+++..+...++|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 4666788999999999999975 588999999875432 22346788999999999999999999999999999999999
Q ss_pred cCCCCHhhhhC
Q 040888 485 YRNGSLHEFLH 495 (495)
Q Consensus 485 ~~~GsL~~~L~ 495 (495)
+++|+|.++++
T Consensus 81 ~~~~~L~~~~~ 91 (274)
T cd06609 81 CGGGSCLDLLK 91 (274)
T ss_pred eCCCcHHHHHh
Confidence 99999998763
No 206
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=98.97 E-value=1.4e-09 Score=104.70 Aligned_cols=90 Identities=21% Similarity=0.373 Sum_probs=76.4
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||++.. .++..+|||.+..... .....++|.+|++++..++|+||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3567778999999999999996 5789999998865322 1223467899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 82 e~~~~~~L~~~~ 93 (267)
T cd08229 82 ELADAGDLSRMI 93 (267)
T ss_pred EecCCCCHHHHH
Confidence 999999998875
No 207
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.96 E-value=2.7e-09 Score=105.29 Aligned_cols=88 Identities=20% Similarity=0.395 Sum_probs=73.8
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|... ++..||+|+++..... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 45777899999999999999875 5889999998754322 224567889999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++ +|.+++
T Consensus 85 ~~~~-~l~~~~ 94 (309)
T cd07872 85 YLDK-DLKQYM 94 (309)
T ss_pred CCCC-CHHHHH
Confidence 9975 777664
No 208
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=98.96 E-value=3.5e-09 Score=101.83 Aligned_cols=90 Identities=24% Similarity=0.410 Sum_probs=73.5
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc---cccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ---RANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~ 478 (495)
.+|...+.||+|+||.||+|... ++..||+|.+...... ....+.+.+|++++.+++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 36778899999999999999874 5899999988643211 11245788999999999999999999988763 457
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++|+||+++|+|.+++
T Consensus 82 ~~v~e~~~~~~L~~~l 97 (265)
T cd06652 82 SIFMEHMPGGSIKDQL 97 (265)
T ss_pred EEEEEecCCCcHHHHH
Confidence 7999999999999875
No 209
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=98.96 E-value=2.4e-09 Score=106.02 Aligned_cols=84 Identities=18% Similarity=0.328 Sum_probs=69.0
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhc-CCCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISR-IRHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||.||+|... +++.||||.++..... ....+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46899999999999985 5889999999764221 1223556777888876 4999999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 81 g~L~~~l 87 (316)
T cd05619 81 GDLMFHI 87 (316)
T ss_pred CcHHHHH
Confidence 9998875
No 210
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.96 E-value=6.8e-10 Score=110.05 Aligned_cols=88 Identities=24% Similarity=0.369 Sum_probs=78.6
Q ss_pred CcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
|+..+.||+|.|..|-.|++ -.|..||||++.+.............||+.|.-++|||||+|+.+...+...|||.|.-
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG 99 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG 99 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence 55678899999999999887 57999999999988765444567889999999999999999999999999999999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
++|+|++||
T Consensus 100 D~GDl~DyI 108 (864)
T KOG4717|consen 100 DGGDLFDYI 108 (864)
T ss_pred CCchHHHHH
Confidence 999999986
No 211
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.96 E-value=1.8e-09 Score=103.87 Aligned_cols=88 Identities=22% Similarity=0.366 Sum_probs=75.2
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|.. .+++.||+|.++.... .....+.+|+.++..++||||+++++++...+..++|+|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e 86 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME 86 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence 3566678899999999999987 4688999999865422 224568899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 87 ~~~~~~L~~~~ 97 (267)
T cd06645 87 FCGGGSLQDIY 97 (267)
T ss_pred ccCCCcHHHHH
Confidence 99999998875
No 212
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=98.96 E-value=1.5e-09 Score=107.89 Aligned_cols=83 Identities=24% Similarity=0.428 Sum_probs=73.4
Q ss_pred cceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCC
Q 040888 410 GRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNG 488 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 488 (495)
.++||+|.||+||-|++ ++|+.||||++.+.+.....+.+..+|+.+|.+++||.||.+.--|+..+..++|||-+ +|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 58899999999999998 57999999999887765555778999999999999999999999999999999999998 45
Q ss_pred CHhhh
Q 040888 489 SLHEF 493 (495)
Q Consensus 489 sL~~~ 493 (495)
|..+.
T Consensus 648 DMLEM 652 (888)
T KOG4236|consen 648 DMLEM 652 (888)
T ss_pred hHHHH
Confidence 65543
No 213
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=98.96 E-value=2.2e-09 Score=106.51 Aligned_cols=84 Identities=21% Similarity=0.352 Sum_probs=67.9
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHH-HHhcCCCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQ-NISRIRHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||.||+|+.. +++.||+|++...... ....+.+.+|.. ++..++|||||++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999984 6889999998754321 112344555554 57889999999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 81 ~~L~~~l 87 (321)
T cd05603 81 GELFFHL 87 (321)
T ss_pred CCHHHHH
Confidence 9998765
No 214
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.96 E-value=1.3e-09 Score=104.23 Aligned_cols=87 Identities=30% Similarity=0.536 Sum_probs=73.6
Q ss_pred cccceeccCCceEEEEEEcCC-CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecC
Q 040888 408 ATGRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 408 ~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
...+.||+|+||.||++.... ++.+|+|.+..............+|+..+.+++||||+++++++......++||||++
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~ 81 (260)
T PF00069_consen 2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCP 81 (260)
T ss_dssp EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEET
T ss_pred EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccc
Confidence 456889999999999999854 6689999998764433223344669999999999999999999999999999999999
Q ss_pred CCCHhhhh
Q 040888 487 NGSLHEFL 494 (495)
Q Consensus 487 ~GsL~~~L 494 (495)
+|+|.++|
T Consensus 82 ~~~L~~~l 89 (260)
T PF00069_consen 82 GGSLQDYL 89 (260)
T ss_dssp TEBHHHHH
T ss_pred cccccccc
Confidence 99999876
No 215
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=98.95 E-value=2.1e-09 Score=103.68 Aligned_cols=90 Identities=23% Similarity=0.462 Sum_probs=74.6
Q ss_pred HhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeC----
Q 040888 402 TATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQ---- 475 (495)
Q Consensus 402 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~---- 475 (495)
.+++.|...+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.++.++ +|+|++++.++|...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 34566777889999999999999874 58899999986542 2245788999999998 799999999999753
Q ss_pred --CEEEEEEEecCCCCHhhhh
Q 040888 476 --GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 --~~~~lv~ey~~~GsL~~~L 494 (495)
...++||||+++|+|.+++
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l 100 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLI 100 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHH
Confidence 4578999999999998875
No 216
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=98.95 E-value=3.7e-10 Score=116.23 Aligned_cols=85 Identities=26% Similarity=0.504 Sum_probs=71.1
Q ss_pred cceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC------EEEEEE
Q 040888 410 GRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG------HNILIY 482 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------~~~lv~ 482 (495)
.+.||+|+||.||+|+. ..|+.||||..+..... ...+...+|+++|++++|+|||++++.=.+.. ...+||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~-r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm 96 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSL-RPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM 96 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhccc-chHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence 57799999999999996 56999999999875422 23567889999999999999999988765543 467999
Q ss_pred EecCCCCHhhhhC
Q 040888 483 DYYRNGSLHEFLH 495 (495)
Q Consensus 483 ey~~~GsL~~~L~ 495 (495)
|||.+|||+..|.
T Consensus 97 EyC~gGsL~~~L~ 109 (732)
T KOG4250|consen 97 EYCSGGSLRKVLN 109 (732)
T ss_pred eecCCCcHHHHhc
Confidence 9999999998763
No 217
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.95 E-value=1.6e-09 Score=105.35 Aligned_cols=88 Identities=26% Similarity=0.477 Sum_probs=74.1
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|+..+.||+|++|.||+|+.. +++.||||++..........+.+.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4677899999999999999874 689999999875433222345788999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
++ ++|.+++
T Consensus 81 ~~-~~l~~~~ 89 (284)
T cd07860 81 LH-QDLKKFM 89 (284)
T ss_pred cc-cCHHHHH
Confidence 96 5787664
No 218
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=98.95 E-value=2.4e-09 Score=102.49 Aligned_cols=82 Identities=23% Similarity=0.444 Sum_probs=68.2
Q ss_pred eeccCCceEEEEEEc---CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCC
Q 040888 412 LLGEGTIGRVYRAKY---PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNG 488 (495)
Q Consensus 412 ~iG~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 488 (495)
.||+|+||.||+|.+ .++..+|+|+++.........++|.+|+.++++++|+||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999975 35789999998754332233568999999999999999999999986 45668999999999
Q ss_pred CHhhhh
Q 040888 489 SLHEFL 494 (495)
Q Consensus 489 sL~~~L 494 (495)
+|.+++
T Consensus 81 ~L~~~l 86 (257)
T cd05116 81 PLNKFL 86 (257)
T ss_pred cHHHHH
Confidence 998876
No 219
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.95 E-value=2.8e-09 Score=103.40 Aligned_cols=89 Identities=28% Similarity=0.528 Sum_probs=74.3
Q ss_pred CCcccceeccCCceEEEEEEcC-----CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe--CCEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-----DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE--QGHN 478 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~--~~~~ 478 (495)
+|...+.||+|+||.||++++. .+..+|||.+...... ...+.|.+|++++++++|+||+++++++.. ....
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 4555688999999999999863 3679999999765332 235689999999999999999999999987 5578
Q ss_pred EEEEEecCCCCHhhhhC
Q 040888 479 ILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L~ 495 (495)
++|+||+++|+|.++++
T Consensus 84 ~lv~e~~~~~~l~~~l~ 100 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQ 100 (284)
T ss_pred EEEEecCCCCCHHHHHH
Confidence 99999999999998863
No 220
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=98.95 E-value=2.2e-09 Score=106.55 Aligned_cols=84 Identities=21% Similarity=0.362 Sum_probs=70.0
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||.||+|+.. +++.||||++..... .....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999985 588999999975432 112345677888888876 699999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 81 g~L~~~i 87 (320)
T cd05590 81 GDLMFHI 87 (320)
T ss_pred chHHHHH
Confidence 9998775
No 221
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=98.95 E-value=2.5e-09 Score=104.66 Aligned_cols=88 Identities=19% Similarity=0.337 Sum_probs=75.9
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||++.. .++..||+|.+..... ...+.+.+|+.++++++|||+++++++|...+..++|+|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 4567778999999999999986 4688999999864322 224678999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 97 ~~~~~~L~~~~ 107 (293)
T cd06647 97 YLAGGSLTDVV 107 (293)
T ss_pred cCCCCcHHHHH
Confidence 99999999875
No 222
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=98.95 E-value=2.6e-09 Score=106.03 Aligned_cols=84 Identities=17% Similarity=0.301 Sum_probs=69.8
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||.||+|+.. +++.||+|++...... ....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46899999999999985 5889999999764321 12245677888888865 899999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|..++
T Consensus 81 ~~L~~~l 87 (321)
T cd05591 81 GDLMFQI 87 (321)
T ss_pred CcHHHHH
Confidence 9998765
No 223
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=98.95 E-value=1.9e-09 Score=109.34 Aligned_cols=88 Identities=17% Similarity=0.313 Sum_probs=72.4
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC-----EEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG-----HNI 479 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~ 479 (495)
+|+..+.||+|+||.||++.. .+|+.||||++..........+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 467789999999999999997 46899999998653222223467889999999999999999999998776 789
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+|+||+. ++|.+++
T Consensus 81 lv~e~~~-~~l~~~~ 94 (372)
T cd07853 81 VVTELMQ-SDLHKII 94 (372)
T ss_pred EEeeccc-cCHHHHH
Confidence 9999997 5776654
No 224
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=98.95 E-value=1.6e-09 Score=113.87 Aligned_cols=94 Identities=23% Similarity=0.304 Sum_probs=77.0
Q ss_pred HHhccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC---
Q 040888 401 LTATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG--- 476 (495)
Q Consensus 401 ~~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~--- 476 (495)
....++|...+.||+|+||.||+|.. .+|+.||||++............+.+|+..+..++|+|+++++..+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 33456888899999999999999986 56999999999765443333567889999999999999999988775432
Q ss_pred -----EEEEEEEecCCCCHhhhh
Q 040888 477 -----HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 -----~~~lv~ey~~~GsL~~~L 494 (495)
..++||||+++|+|.++|
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l 130 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEI 130 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHH
Confidence 367999999999998876
No 225
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.95 E-value=2.7e-09 Score=106.05 Aligned_cols=89 Identities=16% Similarity=0.233 Sum_probs=73.1
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCC-CcceEEEEEEeCCEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHT-NIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~-niv~l~g~~~~~~~~~lv~ 482 (495)
+|...+.||+|+||.||+|+.. +++.||||++...... ....+.+..|++++..++|+ +|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4667899999999999999975 5789999999764321 22345688899999999765 5788999999889999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 E~~~~g~L~~~~ 92 (324)
T cd05587 81 EYVNGGDLMYHI 92 (324)
T ss_pred cCCCCCcHHHHH
Confidence 999999998775
No 226
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.95 E-value=2.1e-09 Score=105.86 Aligned_cols=90 Identities=29% Similarity=0.488 Sum_probs=74.8
Q ss_pred cCCcccceeccCCceEEEEEEcC--------CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeC
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP--------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQ 475 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~ 475 (495)
++|...+.||+|+||.||++... .+..+|+|.+..... .....++.+|++++.++ +||||++++++|...
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC-hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 45777899999999999999752 235799999875422 22345788999999999 899999999999999
Q ss_pred CEEEEEEEecCCCCHhhhhC
Q 040888 476 GHNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 476 ~~~~lv~ey~~~GsL~~~L~ 495 (495)
+..++|+||+++|+|.++++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~ 116 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLR 116 (307)
T ss_pred CceEEEEecCCCCcHHHHHH
Confidence 99999999999999998863
No 227
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=98.95 E-value=2.7e-09 Score=101.66 Aligned_cols=83 Identities=25% Similarity=0.446 Sum_probs=73.0
Q ss_pred ceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCCH
Q 040888 411 RLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGSL 490 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 490 (495)
+.||+|+||.||++...+++.||+|.+...... ...+.|.+|++++++++|+||+++++++......++|+||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 368999999999999877999999998764332 2356799999999999999999999999999999999999999999
Q ss_pred hhhh
Q 040888 491 HEFL 494 (495)
Q Consensus 491 ~~~L 494 (495)
.+++
T Consensus 80 ~~~l 83 (251)
T cd05041 80 LTFL 83 (251)
T ss_pred HHHH
Confidence 8876
No 228
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=98.95 E-value=1.7e-09 Score=105.70 Aligned_cols=91 Identities=26% Similarity=0.544 Sum_probs=75.9
Q ss_pred hccCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeC
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQ 475 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~ 475 (495)
..++|+..+.||+|+||.||++... ....+|+|.+...... ....++.+|++++.++ +|+||++++++|..+
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCH-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 3456777899999999999999863 2368999998754322 2345688999999999 899999999999999
Q ss_pred CEEEEEEEecCCCCHhhhh
Q 040888 476 GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 ~~~~lv~ey~~~GsL~~~L 494 (495)
+..++||||+++|+|.+++
T Consensus 89 ~~~~li~e~~~~~~L~~~l 107 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFL 107 (293)
T ss_pred CCeEEEEEeCCCCcHHHHH
Confidence 9999999999999999876
No 229
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=98.94 E-value=2.4e-09 Score=104.68 Aligned_cols=90 Identities=30% Similarity=0.461 Sum_probs=75.7
Q ss_pred ccCCcccceeccCCceEEEEEEcCC-----------------CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcc
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPD-----------------GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIA 466 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~-----------------g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv 466 (495)
.++|...+.||+|+||.||++...+ +..||+|.+...... ...++|.+|++++.+++|||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-NAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-HHHHHHHHHHHHHHhcCCCCEe
Confidence 3467778999999999999997642 246899998754322 2356899999999999999999
Q ss_pred eEEEEEEeCCEEEEEEEecCCCCHhhhh
Q 040888 467 ELVGFCSEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 467 ~l~g~~~~~~~~~lv~ey~~~GsL~~~L 494 (495)
+++++|..++..++|+||+++|+|.+++
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l 110 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFL 110 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHH
Confidence 9999999999999999999999999876
No 230
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=98.94 E-value=2.6e-09 Score=106.62 Aligned_cols=87 Identities=18% Similarity=0.376 Sum_probs=70.3
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC-----EEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG-----HNIL 480 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~l 480 (495)
|...+.||+|+||.||+|+.. ++..||||++............+.+|++++++++||||+++++++.... ..++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 566789999999999999974 6899999998753222223457889999999999999999999986532 4799
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
|||||+ ++|.+++
T Consensus 82 v~e~~~-~~L~~~l 94 (338)
T cd07859 82 VFELME-SDLHQVI 94 (338)
T ss_pred EEecCC-CCHHHHH
Confidence 999996 6888765
No 231
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=98.94 E-value=3.1e-09 Score=103.40 Aligned_cols=87 Identities=29% Similarity=0.507 Sum_probs=72.7
Q ss_pred CcccceeccCCceEEEEEEc-----CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKY-----PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHNI 479 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~ 479 (495)
|...+.||+|+||.||++.+ .++..||+|.+..... ....+.|.+|++++++++|||++++.+++... ...+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 55678899999999999984 3478899999875432 22346799999999999999999999999875 5678
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||+++|+|.+++
T Consensus 85 lv~e~~~g~~L~~~l 99 (284)
T cd05079 85 LIMEFLPSGSLKEYL 99 (284)
T ss_pred EEEEccCCCCHHHHH
Confidence 999999999999876
No 232
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=98.94 E-value=3.4e-09 Score=103.41 Aligned_cols=88 Identities=20% Similarity=0.405 Sum_probs=74.4
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|++|.||+|..+ +++.||+|.+...... .....+.+|++++++++|+||+++++++..++..++|||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 46777899999999999999985 6889999998754321 223457789999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|++ ++|.+++
T Consensus 84 ~~~-~~L~~~~ 93 (291)
T cd07844 84 YLD-TDLKQYM 93 (291)
T ss_pred cCC-CCHHHHH
Confidence 998 4898765
No 233
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=98.94 E-value=3e-09 Score=102.04 Aligned_cols=86 Identities=22% Similarity=0.442 Sum_probs=72.6
Q ss_pred CCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
+|.....||+|++|.||+|...++..+|+|.+..... ..+.|.+|++++++++|+|++++++++. .+..++||||+
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 4666788999999999999987777899998865432 2467899999999999999999999875 45678999999
Q ss_pred CCCCHhhhhC
Q 040888 486 RNGSLHEFLH 495 (495)
Q Consensus 486 ~~GsL~~~L~ 495 (495)
++|+|.++++
T Consensus 83 ~~~~L~~~~~ 92 (260)
T cd05069 83 GKGSLLDFLK 92 (260)
T ss_pred CCCCHHHHHh
Confidence 9999998863
No 234
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.94 E-value=2.1e-09 Score=105.64 Aligned_cols=89 Identities=28% Similarity=0.524 Sum_probs=74.1
Q ss_pred cCCcccceeccCCceEEEEEEc--------CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeC
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY--------PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQ 475 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~ 475 (495)
++|...+.||+|+||.||+|.. .++..||+|.+..... ....+++.+|+.++..+ +||||+++++++...
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc-hHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 4566779999999999999974 1245799999875322 22346789999999999 899999999999999
Q ss_pred CEEEEEEEecCCCCHhhhh
Q 040888 476 GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 ~~~~lv~ey~~~GsL~~~L 494 (495)
...++||||+++|+|.+++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l 112 (304)
T cd05101 94 GPLYVIVEYASKGNLREYL 112 (304)
T ss_pred CceEEEEecCCCCcHHHHH
Confidence 9999999999999999886
No 235
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=98.94 E-value=3.3e-09 Score=101.50 Aligned_cols=89 Identities=20% Similarity=0.441 Sum_probs=73.7
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe--CCEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE--QGHNILIY 482 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ 482 (495)
+|...+.||+|+||.||++.. .+++.+|+|.+..........+.+..|++++++++|+||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 366678999999999999987 468899999987544333335678899999999999999999998864 34578999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 e~~~~~~L~~~l 92 (265)
T cd08217 81 EYCEGGDLAQLI 92 (265)
T ss_pred hhccCCCHHHHH
Confidence 999999998875
No 236
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=98.93 E-value=3.9e-09 Score=103.63 Aligned_cols=88 Identities=23% Similarity=0.402 Sum_probs=73.8
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|... +++.||+|.+...... .....+.+|++++.+++||||+++++++..++..++|+|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 35677889999999999999875 5889999998654322 224567889999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|++ |+|.+++
T Consensus 85 ~~~-~~l~~~l 94 (301)
T cd07873 85 YLD-KDLKQYL 94 (301)
T ss_pred ccc-cCHHHHH
Confidence 997 5887765
No 237
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=98.93 E-value=5.5e-09 Score=100.46 Aligned_cols=88 Identities=23% Similarity=0.499 Sum_probs=73.6
Q ss_pred CcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc-------ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR-------ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
|.....||+|+||.||+|.. .+++.+|+|.+....... ...+.+.+|++++++++||||+++++++...+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 45568899999999999987 458899999886542211 1125688999999999999999999999999999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++|+||+++++|.+++
T Consensus 82 ~lv~e~~~~~~L~~~l 97 (267)
T cd06628 82 NIFLEYVPGGSVAALL 97 (267)
T ss_pred EEEEEecCCCCHHHHH
Confidence 9999999999998876
No 238
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=98.93 E-value=4e-09 Score=102.06 Aligned_cols=88 Identities=27% Similarity=0.449 Sum_probs=74.7
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC---CCCcceEEEEEEeCCEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR---HTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv 481 (495)
.|+..+.||+|+||.||+|.. .++..||+|.+..... ....+++.+|++++++++ |||+++++++|..+...++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP-DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC-chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 356678899999999999997 5689999999865422 223467889999999987 99999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++++|.+++
T Consensus 81 ~e~~~~~~L~~~~ 93 (277)
T cd06917 81 MEYAEGGSVRTLM 93 (277)
T ss_pred EecCCCCcHHHHH
Confidence 9999999998875
No 239
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=98.93 E-value=3.4e-09 Score=105.25 Aligned_cols=84 Identities=23% Similarity=0.367 Sum_probs=67.8
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHH-HHhcCCCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQ-NISRIRHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||+||+|... +|+.||+|.+...... ....+++..|.. ++..++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999984 6899999999754321 112344555554 56789999999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 81 g~L~~~l 87 (323)
T cd05575 81 GELFFHL 87 (323)
T ss_pred CCHHHHH
Confidence 9998775
No 240
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=98.93 E-value=3.1e-09 Score=105.38 Aligned_cols=84 Identities=18% Similarity=0.329 Sum_probs=70.0
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||.||++... +++.||||.+...... ....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999985 5889999999754321 12245677888888877 799999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 81 ~~L~~~~ 87 (318)
T cd05570 81 GDLMFHI 87 (318)
T ss_pred CCHHHHH
Confidence 9998765
No 241
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=98.93 E-value=2.7e-09 Score=104.63 Aligned_cols=90 Identities=26% Similarity=0.488 Sum_probs=74.1
Q ss_pred cCCcccceeccCCceEEEEEEcCC-CC--EEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD-GK--VLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~-g~--~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 480 (495)
++|...+.||+|+||.||+|...+ +. .+++|.+..... ....+.|.+|++++.++ +||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFAS-ENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCC-HHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 467778999999999999998843 43 478888764321 22346789999999999 79999999999999999999
Q ss_pred EEEecCCCCHhhhhC
Q 040888 481 IYDYYRNGSLHEFLH 495 (495)
Q Consensus 481 v~ey~~~GsL~~~L~ 495 (495)
|+||+++|+|.++++
T Consensus 81 v~e~~~~~~L~~~l~ 95 (297)
T cd05089 81 AIEYAPYGNLLDFLR 95 (297)
T ss_pred EEEecCCCcHHHHHH
Confidence 999999999998863
No 242
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=98.93 E-value=3.9e-09 Score=104.37 Aligned_cols=89 Identities=24% Similarity=0.436 Sum_probs=77.2
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+|...+.||+|+||.||+|... ++..||+|.+....... ...+.+.+|++++.+++|+||+++++++...+..++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 5777889999999999999985 48999999997653321 234678999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 82 ~~~~~~L~~~~ 92 (316)
T cd05574 82 YCPGGELFRLL 92 (316)
T ss_pred ecCCCCHHHHH
Confidence 99999999876
No 243
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=98.93 E-value=3.7e-09 Score=105.14 Aligned_cols=84 Identities=23% Similarity=0.347 Sum_probs=67.8
Q ss_pred ceeccCCceEEEEEEc-CCCCEEEEEEecCcccc-cccHHHHHHHHH-HHhcCCCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ-RANSESFSEIVQ-NISRIRHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~f~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||.||+|+. .+|+.+|+|++...... ....+.+..|.. ++..++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4689999999999987 46899999999754221 122345566654 46779999999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 81 ~~L~~~l 87 (325)
T cd05604 81 GELFFHL 87 (325)
T ss_pred CCHHHHH
Confidence 9998765
No 244
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.93 E-value=1.5e-09 Score=110.87 Aligned_cols=90 Identities=24% Similarity=0.437 Sum_probs=77.8
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcc-cccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSH-FQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
+-|..++.||.|+-|.|..|++ .+|+.+|||.+.+.. ..........+|+-+|+-+.|||++++++.+......|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 3456678999999999999998 679999999997652 22223456789999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|.|+++|
T Consensus 92 Eyv~gGELFdyl 103 (786)
T KOG0588|consen 92 EYVPGGELFDYL 103 (786)
T ss_pred EecCCchhHHHH
Confidence 999999999986
No 245
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=98.93 E-value=2.1e-09 Score=104.31 Aligned_cols=90 Identities=23% Similarity=0.362 Sum_probs=75.0
Q ss_pred ccCCcccceeccCCceEEEEEEcCC-----CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe-CCE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPD-----GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE-QGH 477 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~-~~~ 477 (495)
.++|...+.||+|+||.||+|...+ +..|++|++..... ....+.+.+|+.++.+++|+||+++++++.. +..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHAS-EIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 3567778999999999999999854 67899999864322 2235678999999999999999999999877 467
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++++||+++|+|.+++
T Consensus 84 ~~~~~~~~~~~~L~~~l 100 (280)
T cd05043 84 PFVLYPYMNWGNLKLFL 100 (280)
T ss_pred CEEEEEcCCCCcHHHHH
Confidence 88999999999999876
No 246
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=98.93 E-value=3.5e-09 Score=101.04 Aligned_cols=86 Identities=21% Similarity=0.349 Sum_probs=76.6
Q ss_pred cCCcccceeccCCceEEEEEEcCC-CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|...+ +..+++|.+..... .+++.+|++++++++|+|++++++++..++..++++|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e 78 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME 78 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence 467778999999999999999864 88999999865421 5689999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++++|.+++
T Consensus 79 ~~~~~~L~~~l 89 (256)
T cd06612 79 YCGAGSVSDIM 89 (256)
T ss_pred cCCCCcHHHHH
Confidence 99999998876
No 247
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.93 E-value=4.1e-09 Score=102.35 Aligned_cols=87 Identities=23% Similarity=0.472 Sum_probs=73.8
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|+..+.||+|++|.||+|+.. +|..||||++...... ...+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 4677899999999999999985 5889999998764322 2245678899999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++ +|.+++
T Consensus 80 ~~~-~l~~~~ 88 (284)
T cd07836 80 MDK-DLKKYM 88 (284)
T ss_pred CCc-cHHHHH
Confidence 985 787764
No 248
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=98.93 E-value=3.6e-09 Score=104.83 Aligned_cols=84 Identities=18% Similarity=0.320 Sum_probs=67.6
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhc-CCCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISR-IRHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||.||+|... +++.||+|+++..... ....+.+..|.+++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999984 5889999999754321 1223455667777664 4899999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 81 g~L~~~~ 87 (316)
T cd05592 81 GDLMFHI 87 (316)
T ss_pred CcHHHHH
Confidence 9998775
No 249
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.93 E-value=4.4e-09 Score=103.14 Aligned_cols=88 Identities=18% Similarity=0.356 Sum_probs=76.1
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.+|+..+.||.|+||.||+|.. .+++.||+|.+..... ...+.+.+|+++++.++|||++++++++...+..++|+|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 96 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME 96 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence 3577788999999999999986 5689999999865432 224678899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 97 ~~~~~~L~~~~ 107 (296)
T cd06655 97 YLAGGSLTDVV 107 (296)
T ss_pred ecCCCcHHHHH
Confidence 99999998865
No 250
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.92 E-value=8.2e-10 Score=111.13 Aligned_cols=88 Identities=19% Similarity=0.371 Sum_probs=75.8
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
..|..-..||+|+.|.||.+.- ..++.||||++...... ..+-..+|+.+|+..+|+|||+.+..|...++.|+|||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~--~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME 350 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP--KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME 350 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC--chhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence 4566678899999999999976 56889999999765432 24557899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
||++|+|.+.+
T Consensus 351 ym~ggsLTDvV 361 (550)
T KOG0578|consen 351 YMEGGSLTDVV 361 (550)
T ss_pred ecCCCchhhhh
Confidence 99999998764
No 251
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=98.92 E-value=3.8e-09 Score=102.43 Aligned_cols=89 Identities=19% Similarity=0.435 Sum_probs=73.2
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCC----EEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGK----VLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~----~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
.+|...+.||+|+||.||+|..+ +|. .+|+|.+..... .....++.+|++++.+++||||++++++|.. +..+
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 34666789999999999999874 233 689998875532 2234678999999999999999999999987 7789
Q ss_pred EEEEecCCCCHhhhhC
Q 040888 480 LIYDYYRNGSLHEFLH 495 (495)
Q Consensus 480 lv~ey~~~GsL~~~L~ 495 (495)
+|+||+++|+|.++++
T Consensus 85 ~v~e~~~~g~L~~~l~ 100 (279)
T cd05057 85 LITQLMPLGCLLDYVR 100 (279)
T ss_pred EEEecCCCCcHHHHHH
Confidence 9999999999998763
No 252
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=98.92 E-value=6.1e-09 Score=99.10 Aligned_cols=89 Identities=28% Similarity=0.486 Sum_probs=76.8
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHNILIY 482 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 482 (495)
+|...+.||+|++|.||+|..+ ++..|++|++..........+.+.+|++.+++++|+||+++++.+... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3566789999999999999986 688999999876543223357899999999999999999999999988 8899999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++++|.+++
T Consensus 81 e~~~~~~L~~~~ 92 (260)
T cd06606 81 EYVSGGSLSSLL 92 (260)
T ss_pred EecCCCcHHHHH
Confidence 999999999875
No 253
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.92 E-value=3.6e-09 Score=105.48 Aligned_cols=89 Identities=21% Similarity=0.340 Sum_probs=73.8
Q ss_pred CCcccceeccCCceEEEEEEc----CCCCEEEEEEecCcccc--cccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY----PDGKVLAVKKIDSSHFQ--RANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 478 (495)
+|...+.||+|+||.||+++. .+++.||+|++...... ....+.+.+|++++.++ +|+||+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 466788999999999999875 35889999998653221 11245688899999999 599999999999999999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+++|+|.+++
T Consensus 81 ~lv~e~~~~g~L~~~l 96 (332)
T cd05614 81 HLILDYVSGGEMFTHL 96 (332)
T ss_pred EEEEeCCCCCcHHHHH
Confidence 9999999999998876
No 254
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=98.92 E-value=2.7e-09 Score=103.26 Aligned_cols=89 Identities=18% Similarity=0.341 Sum_probs=75.2
Q ss_pred cCCcccceeccCCceEEEEEEcCC------CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD------GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
++|...+.||+|+||.||+|...+ +..||+|.+..... ......|.+|++++.+++|+||+++++++......
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 456778999999999999998742 46899999865432 12245789999999999999999999999999999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+++|+|.+++
T Consensus 85 ~~v~e~~~~~~L~~~l 100 (277)
T cd05032 85 LVVMELMAKGDLKSYL 100 (277)
T ss_pred EEEEecCCCCCHHHHH
Confidence 9999999999999876
No 255
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=98.92 E-value=4.2e-09 Score=104.66 Aligned_cols=89 Identities=16% Similarity=0.231 Sum_probs=72.6
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (495)
+|...+.||+|+||.||+|+.. +++.||+|.+...... ....+.+..|.+++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4677899999999999999875 5789999999754321 12234567788888777 5899999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 E~~~~g~L~~~~ 92 (323)
T cd05616 81 EYVNGGDLMYQI 92 (323)
T ss_pred cCCCCCCHHHHH
Confidence 999999998765
No 256
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=98.92 E-value=2.9e-09 Score=104.00 Aligned_cols=87 Identities=28% Similarity=0.616 Sum_probs=73.7
Q ss_pred CCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
+|...+.||+|+||.||+|+.. ++..+++|.+..... ...+.|.+|++++++++|+||+++++++...+..+
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL--AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH--HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 4666789999999999999742 355789999865432 22467999999999999999999999999999999
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||+++|+|.+++
T Consensus 84 lv~e~~~~~~L~~~i 98 (291)
T cd05094 84 MVFEYMKHGDLNKFL 98 (291)
T ss_pred EEEecCCCCcHHHHH
Confidence 999999999999886
No 257
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=98.92 E-value=2.9e-09 Score=102.22 Aligned_cols=88 Identities=23% Similarity=0.299 Sum_probs=76.6
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|+..+.||+|+||.||++... +++.+|+|++...... ...+++.+|++.+++++||||+++++++......++|+||
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh-HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 4666788999999999999985 5889999998765322 3356789999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++++|.+++
T Consensus 81 ~~~~~L~~~~ 90 (265)
T cd06605 81 MDGGSLDKIL 90 (265)
T ss_pred cCCCcHHHHH
Confidence 9999999876
No 258
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=98.92 E-value=4.8e-09 Score=102.14 Aligned_cols=89 Identities=24% Similarity=0.362 Sum_probs=78.2
Q ss_pred hccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.++.|...+.||+|++|.||+|..+ ++..+++|++..... ..+.+.+|++++++++|+|++++++++...+..++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 4556777789999999999999986 688999999975432 356789999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
+||+++++|.+++
T Consensus 94 ~e~~~~~~L~~~l 106 (286)
T cd06614 94 MEYMDGGSLTDII 106 (286)
T ss_pred EeccCCCcHHHHH
Confidence 9999999999876
No 259
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=98.92 E-value=4.2e-09 Score=114.68 Aligned_cols=90 Identities=17% Similarity=0.296 Sum_probs=77.5
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|... +++.||||++...... ......+.+|++++..++||||+++++++...+..++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 56777899999999999999985 6899999999754321 122467889999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 84 Ey~~g~~L~~li 95 (669)
T cd05610 84 EYLIGGDVKSLL 95 (669)
T ss_pred eCCCCCCHHHHH
Confidence 999999998876
No 260
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=98.92 E-value=4.5e-09 Score=102.69 Aligned_cols=88 Identities=22% Similarity=0.412 Sum_probs=75.2
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+.|...+.||+|+||.||+|+.. ++..+|+|.+.... ....+.+.+|++++++++|+|++++++++..++..++|||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 34666788999999999999985 58899999987542 2235678999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|..++
T Consensus 90 ~~~~~~l~~~~ 100 (292)
T cd06644 90 FCPGGAVDAIM 100 (292)
T ss_pred cCCCCcHHHHH
Confidence 99999997654
No 261
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.92 E-value=3.6e-10 Score=110.30 Aligned_cols=88 Identities=27% Similarity=0.430 Sum_probs=77.2
Q ss_pred CcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
|.....||+|+||.||||.. ..++.||+|.+..+... ...++..+|+.+++.++|+||.+.+|.+..+...+++||||
T Consensus 15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~-deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE-DEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred cccchhccccccceeeeeeeccccceEEEEEechhhcc-hhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 44568899999999999998 46899999999876543 33678899999999999999999999999999999999999
Q ss_pred CCCCHhhhhC
Q 040888 486 RNGSLHEFLH 495 (495)
Q Consensus 486 ~~GsL~~~L~ 495 (495)
.+|++.+.|+
T Consensus 94 ~gGsv~~lL~ 103 (467)
T KOG0201|consen 94 GGGSVLDLLK 103 (467)
T ss_pred cCcchhhhhc
Confidence 9999988763
No 262
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=98.92 E-value=3.4e-09 Score=101.92 Aligned_cols=82 Identities=27% Similarity=0.424 Sum_probs=68.1
Q ss_pred ceeccCCceEEEEEEcCC-------------CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE
Q 040888 411 RLLGEGTIGRVYRAKYPD-------------GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH 477 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~-------------g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (495)
+.||+|+||.||+|++.+ ...|++|.+..... .....|.+|+.+++.++||||++++++|..+..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR--DISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh--hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 358999999999998632 23588998765432 234578899999999999999999999999989
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+++|+|..++
T Consensus 79 ~~lv~e~~~~~~l~~~~ 95 (262)
T cd05077 79 NIMVEEFVEFGPLDLFM 95 (262)
T ss_pred CEEEEecccCCCHHHHH
Confidence 99999999999998765
No 263
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.92 E-value=4.9e-09 Score=102.51 Aligned_cols=89 Identities=21% Similarity=0.373 Sum_probs=74.7
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|++|.||+|... +|+.||+|.+..........+.+.+|++++++++|+||+++++++..++..++|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46777899999999999999985 68899999986543322334678899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|++ ++|.+++
T Consensus 82 ~~~-~~l~~~~ 91 (294)
T PLN00009 82 YLD-LDLKKHM 91 (294)
T ss_pred ccc-ccHHHHH
Confidence 996 5776654
No 264
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=98.92 E-value=2.9e-09 Score=103.53 Aligned_cols=88 Identities=23% Similarity=0.408 Sum_probs=75.0
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|+..+.||+|+||.||+|..+ +++.||||+++.........+.+.+|++++++++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 5777899999999999999985 588999999875433233356789999999999999999999999999999999999
Q ss_pred cCCCCHhhh
Q 040888 485 YRNGSLHEF 493 (495)
Q Consensus 485 ~~~GsL~~~ 493 (495)
++++.+..+
T Consensus 82 ~~~~~l~~~ 90 (288)
T cd07833 82 VERTLLELL 90 (288)
T ss_pred CCCCHHHHH
Confidence 998776653
No 265
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=98.92 E-value=2.8e-09 Score=101.86 Aligned_cols=80 Identities=29% Similarity=0.538 Sum_probs=66.9
Q ss_pred ceeccCCceEEEEEEcCC-C----------CEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 411 RLLGEGTIGRVYRAKYPD-G----------KVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~-g----------~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
+.||+|+||.||+|...+ + ..+++|.+..... ....|.+|+.++++++||||++++++|.. +..+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 368999999999999854 3 2577787654322 15789999999999999999999999988 7789
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+|+||+++|+|.+++
T Consensus 77 lv~e~~~~~~L~~~l 91 (259)
T cd05037 77 MVEEYVKFGPLDVFL 91 (259)
T ss_pred EEEEcCCCCcHHHHH
Confidence 999999999999876
No 266
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.91 E-value=7e-09 Score=99.82 Aligned_cols=89 Identities=25% Similarity=0.452 Sum_probs=73.5
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc---cccHHHHHHHHHHHhcCCCCCcceEEEEEEe--CCEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ---RANSESFSEIVQNISRIRHTNIAELVGFCSE--QGHNI 479 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~--~~~~~ 479 (495)
+|...+.||+|+||.||++... ++..||+|++...... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 6778899999999999999874 5889999998643221 1123568899999999999999999999875 35678
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+++||+++++|.+++
T Consensus 83 l~~e~~~~~~L~~~l 97 (266)
T cd06651 83 IFMEYMPGGSVKDQL 97 (266)
T ss_pred EEEeCCCCCcHHHHH
Confidence 999999999998876
No 267
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.91 E-value=1.9e-10 Score=113.18 Aligned_cols=87 Identities=23% Similarity=0.440 Sum_probs=72.0
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCC-EEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSEQG-HNILIY 482 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~-~~~lv~ 482 (495)
.|...+.||.|.||.||+|+- ..|..||||+++..-.. ..+---.|||+.|+++. |||||+|...+.+.+ ..++||
T Consensus 11 RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 11 RYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 455678899999999999987 56889999999765332 22233578999999998 999999999999988 899999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
|||+. +|.+.+
T Consensus 90 E~Md~-NLYqLm 100 (538)
T KOG0661|consen 90 EFMDC-NLYQLM 100 (538)
T ss_pred Hhhhh-hHHHHH
Confidence 99975 788765
No 268
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=98.91 E-value=4.2e-09 Score=100.91 Aligned_cols=80 Identities=20% Similarity=0.434 Sum_probs=66.6
Q ss_pred eccCCceEEEEEEcC---CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCC
Q 040888 413 LGEGTIGRVYRAKYP---DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGS 489 (495)
Q Consensus 413 iG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 489 (495)
||+|+||.||+|.+. .+..||+|.+..... ....+.|.+|++++++++|+||++++++|. .+..++|+||+++|+
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE-KSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccC-hHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 899999999999763 355799999875432 223467999999999999999999999885 456789999999999
Q ss_pred Hhhhh
Q 040888 490 LHEFL 494 (495)
Q Consensus 490 L~~~L 494 (495)
|.+++
T Consensus 81 L~~~l 85 (257)
T cd05115 81 LNKFL 85 (257)
T ss_pred HHHHH
Confidence 99876
No 269
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=98.91 E-value=4e-09 Score=104.79 Aligned_cols=89 Identities=16% Similarity=0.226 Sum_probs=72.3
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCCEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIR-HTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 482 (495)
+|...+.||+|+||.||+|... +|+.||+|.+...... ....+.+..|.+++..+. |++|+++.+++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3666789999999999999874 6889999999754321 123456788888888885 577888999999989999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 Ey~~~g~L~~~i 92 (323)
T cd05615 81 EYVNGGDLMYHI 92 (323)
T ss_pred cCCCCCcHHHHH
Confidence 999999998875
No 270
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.91 E-value=8.5e-09 Score=98.08 Aligned_cols=89 Identities=26% Similarity=0.522 Sum_probs=76.8
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|++|.||+++.. +++.|++|.+..........+.+.+|++++++++|+|++++++++...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 3566789999999999999875 588999999976543223456799999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++++|.+++
T Consensus 81 ~~~~~L~~~~ 90 (254)
T cd06627 81 AENGSLRQII 90 (254)
T ss_pred CCCCcHHHHH
Confidence 9999998875
No 271
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.91 E-value=2.1e-09 Score=110.48 Aligned_cols=92 Identities=22% Similarity=0.358 Sum_probs=77.0
Q ss_pred hccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 479 (495)
..++|....+||+|+||+|+.+.++ +++.+|||+++++.. ++...+..+.|-+++.-. +||.|++|+.++.+.+..+
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 4568889999999999999999995 588999999988743 334456777787776655 6999999999999999999
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||+.|||+..+.
T Consensus 446 fvmey~~Ggdm~~~~ 460 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHI 460 (694)
T ss_pred EEEEecCCCcEEEEE
Confidence 999999999965543
No 272
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=98.90 E-value=5.3e-09 Score=104.11 Aligned_cols=84 Identities=13% Similarity=0.269 Sum_probs=70.5
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||.||+|... +++.||+|++....... ...+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999974 58899999997643221 2245688899999888 699999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 81 ~~L~~~~ 87 (327)
T cd05617 81 GDLMFHM 87 (327)
T ss_pred CcHHHHH
Confidence 9998765
No 273
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=98.90 E-value=3.8e-09 Score=100.98 Aligned_cols=82 Identities=26% Similarity=0.408 Sum_probs=70.1
Q ss_pred ceeccCCceEEEEEEcCC--CC--EEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecC
Q 040888 411 RLLGEGTIGRVYRAKYPD--GK--VLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~--g~--~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
+.||+|++|.||+|.+.+ ++ .||+|.+...... ...+.|.+|++++++++||||+++++++.. ...++|+||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 368999999999998743 33 6899999875442 345789999999999999999999999988 88899999999
Q ss_pred CCCHhhhh
Q 040888 487 NGSLHEFL 494 (495)
Q Consensus 487 ~GsL~~~L 494 (495)
+|+|.+++
T Consensus 79 ~~~L~~~l 86 (257)
T cd05040 79 LGSLLDRL 86 (257)
T ss_pred CCcHHHHH
Confidence 99999876
No 274
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=98.90 E-value=4.2e-09 Score=102.26 Aligned_cols=87 Identities=26% Similarity=0.568 Sum_probs=73.5
Q ss_pred CCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
+|.....||+|+||.||++... ++..+|+|.+..... ...+.|.+|++++++++|+||+++++++...+..+
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE--SARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH--HHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 4556789999999999999642 356889998865432 23568999999999999999999999999999999
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+|+||+++|+|.+++
T Consensus 84 lv~e~~~~~~L~~~i 98 (280)
T cd05092 84 MVFEYMRHGDLNRFL 98 (280)
T ss_pred EEEecCCCCCHHHHH
Confidence 999999999998876
No 275
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=98.90 E-value=5e-09 Score=101.13 Aligned_cols=84 Identities=27% Similarity=0.573 Sum_probs=69.4
Q ss_pred ceeccCCceEEEEEEcCC-CC--EEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEEEecC
Q 040888 411 RLLGEGTIGRVYRAKYPD-GK--VLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~-g~--~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
++||+|+||.||+|...+ +. .+|+|.+..... ....+.|.+|++++.++ +||||++++++|...+..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC-HHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 368999999999999853 44 468888864321 22346789999999999 89999999999999999999999999
Q ss_pred CCCHhhhhC
Q 040888 487 NGSLHEFLH 495 (495)
Q Consensus 487 ~GsL~~~L~ 495 (495)
+|+|.++++
T Consensus 80 ~~~L~~~i~ 88 (270)
T cd05047 80 HGNLLDFLR 88 (270)
T ss_pred CCcHHHHHH
Confidence 999998763
No 276
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=98.90 E-value=5.3e-09 Score=99.89 Aligned_cols=89 Identities=22% Similarity=0.374 Sum_probs=73.4
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe-CCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE-QGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~e 483 (495)
+|...+.||+|++|.||++... +++.||+|++..........+.+.+|++++++++|+|++++.+.+.. +...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 3667789999999999999974 57899999997543323335678899999999999999999988764 446789999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 81 ~~~~~~l~~~l 91 (257)
T cd08223 81 FCEGGDLYHKL 91 (257)
T ss_pred ccCCCcHHHHH
Confidence 99999998876
No 277
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=98.90 E-value=8.3e-10 Score=110.68 Aligned_cols=76 Identities=25% Similarity=0.517 Sum_probs=66.8
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCC
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGS 489 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 489 (495)
.+-+|+|+-|.||+|++ .++.||||+++..+ ..+|+-|++++|+||+.+.|+|......++|||||+.|-
T Consensus 129 LeWlGSGaQGAVF~Grl-~netVAVKKV~elk---------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq 198 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL-HNETVAVKKVRELK---------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ 198 (904)
T ss_pred hhhhccCcccceeeeec-cCceehhHHHhhhh---------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence 57799999999999999 45679999986432 246888999999999999999999999999999999999
Q ss_pred HhhhhC
Q 040888 490 LHEFLH 495 (495)
Q Consensus 490 L~~~L~ 495 (495)
|.+.|+
T Consensus 199 L~~VLk 204 (904)
T KOG4721|consen 199 LYEVLK 204 (904)
T ss_pred HHHHHh
Confidence 998874
No 278
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.90 E-value=3.9e-09 Score=104.06 Aligned_cols=90 Identities=20% Similarity=0.407 Sum_probs=73.6
Q ss_pred HhccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc------------ccHHHHHHHHHHHhcCCCCCcceE
Q 040888 402 TATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR------------ANSESFSEIVQNISRIRHTNIAEL 468 (495)
Q Consensus 402 ~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~------------~~~~~f~~e~~~l~~l~H~niv~l 468 (495)
+..+.|.....||+|.||.|-+|.. .+++.||||.+.+..... ...+...+||.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 3456788899999999999999987 469999999997642210 113578899999999999999999
Q ss_pred EEEEEeC--CEEEEEEEecCCCCHh
Q 040888 469 VGFCSEQ--GHNILIYDYYRNGSLH 491 (495)
Q Consensus 469 ~g~~~~~--~~~~lv~ey~~~GsL~ 491 (495)
+.+..+. +..|||+|||..|.+.
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~ 198 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVK 198 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccc
Confidence 9998764 5689999999998764
No 279
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=98.90 E-value=5.4e-09 Score=99.80 Aligned_cols=84 Identities=27% Similarity=0.589 Sum_probs=73.1
Q ss_pred ceeccCCceEEEEEEcCC----CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecC
Q 040888 411 RLLGEGTIGRVYRAKYPD----GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
+.||+|+||.||+|.... +..||+|.+....... ..+.+.+|++.+.+++|+|++++++++......++|+||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 468999999999999853 7889999997654322 35789999999999999999999999999999999999999
Q ss_pred CCCHhhhhC
Q 040888 487 NGSLHEFLH 495 (495)
Q Consensus 487 ~GsL~~~L~ 495 (495)
+|+|.++++
T Consensus 80 ~~~L~~~l~ 88 (262)
T cd00192 80 GGDLLDYLR 88 (262)
T ss_pred CCcHHHHHh
Confidence 999998863
No 280
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.90 E-value=8.7e-10 Score=112.72 Aligned_cols=152 Identities=33% Similarity=0.492 Sum_probs=114.0
Q ss_pred CCEeEEEcCCCCCccccccccCCCC-CCcEEECcCCCCCCC-CCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLK-SVSYLDVSNNNLKDS-IPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~-~L~~L~Ls~N~l~g~-~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
..++.|++.+|.++ .+++....+. +|+.|++++|.+... .|....++|+.|++++|+++ .+|...+.+++|+.|++
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchhhhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 35888999998887 4555566664 899999999998843 24444589999999999998 67776668889999999
Q ss_pred ccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCccc
Q 040888 147 GSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGW 224 (495)
Q Consensus 147 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~ 224 (495)
++|+++ .+|.....+..|+.|.+++|.+. .++..+.++.++..|.+.+|++...+..++.++ ++.|++++|.++..
T Consensus 194 s~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~~i 270 (394)
T COG4886 194 SGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQISSI 270 (394)
T ss_pred cCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeeccchhccccccceecccccccccc
Confidence 999988 56665556667888888888644 456667777888888888888776555555555 78888888877643
No 281
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.90 E-value=1.5e-09 Score=106.16 Aligned_cols=84 Identities=26% Similarity=0.499 Sum_probs=68.4
Q ss_pred CCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhc--CCCCCcceEEEEEEeCC----EEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISR--IRHTNIAELVGFCSEQG----HNI 479 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~--l~H~niv~l~g~~~~~~----~~~ 479 (495)
.....+.||+|.||.||+|.+ .|..||||.+... .++.+.+|.++-.. +||+||..+++.=..+. +.+
T Consensus 212 qI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr-----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR-----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred eeEEEEEecCccccceeeccc-cCCceEEEEeccc-----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 345578999999999999999 5678999998643 25677888887765 69999999887765432 689
Q ss_pred EEEEecCCCCHhhhhC
Q 040888 480 LIYDYYRNGSLHEFLH 495 (495)
Q Consensus 480 lv~ey~~~GsL~~~L~ 495 (495)
||.||-|+|||+|||.
T Consensus 286 LvTdYHe~GSL~DyL~ 301 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLN 301 (513)
T ss_pred EeeecccCCcHHHHHh
Confidence 9999999999999984
No 282
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=98.90 E-value=2.1e-09 Score=103.55 Aligned_cols=83 Identities=27% Similarity=0.482 Sum_probs=70.0
Q ss_pred ceeccCCceEEEEEEcCC-------CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 411 RLLGEGTIGRVYRAKYPD-------GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~-------g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+.||+|+||.||+|+..+ +..+|+|.+..... ......|.+|++++++++||||++++++|...+..++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc-hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 468999999999998742 35789998865422 1235678999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 80 ~~~~~~L~~~l 90 (269)
T cd05044 80 LMEGGDLLSYL 90 (269)
T ss_pred ccCCCcHHHHH
Confidence 99999999876
No 283
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.90 E-value=1.6e-10 Score=107.43 Aligned_cols=130 Identities=27% Similarity=0.316 Sum_probs=106.1
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccC
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSN 149 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 149 (495)
.++.+||++|.++ .+..++.-++.++.|+||+|.+.-.-.....++|+.||||+|.++ .+-..-..+.+.+.|.|+.|
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N 362 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTVQNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQN 362 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEeccccceeeehhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhh
Confidence 4888999999987 566778889999999999999984433344489999999999998 45555567889999999999
Q ss_pred cCCCccchhhhCCCCCcEEEccCCcCCCc-CcccccCCCCCCEEeccCCcccccc
Q 040888 150 QLNGQLSDMFQKNEKLETLDLSKNQLTGE-LPRSFASLSSLKKLYLQNNQFTGSI 203 (495)
Q Consensus 150 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~~ 203 (495)
.|... +.+..+-+|..||+++|++... --..+++++.|+.+.|.+|.+.+.+
T Consensus 363 ~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 363 KIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 98632 3366778899999999999742 1246899999999999999999876
No 284
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=98.90 E-value=5.8e-09 Score=101.05 Aligned_cols=82 Identities=21% Similarity=0.324 Sum_probs=69.8
Q ss_pred eccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCCH
Q 040888 413 LGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGSL 490 (495)
Q Consensus 413 iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 490 (495)
||+|+||+||++... +|+.+|+|.+...... ....+.+..|++++++++|||++++.+++...+..++|+||+++|+|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999874 6889999998754321 12245678899999999999999999999999999999999999999
Q ss_pred hhhh
Q 040888 491 HEFL 494 (495)
Q Consensus 491 ~~~L 494 (495)
.+++
T Consensus 81 ~~~l 84 (277)
T cd05577 81 KYHI 84 (277)
T ss_pred HHHH
Confidence 8876
No 285
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.89 E-value=3.3e-09 Score=104.93 Aligned_cols=89 Identities=30% Similarity=0.530 Sum_probs=73.6
Q ss_pred cCCcccceeccCCceEEEEEEcC--------CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeC
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP--------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQ 475 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~ 475 (495)
++|...+.||+|+||.||++... ....+|+|.+..... .....++.+|++++.++ +||||++++++|...
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-DKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 45667899999999999999741 245789999875322 22345788999999999 699999999999998
Q ss_pred CEEEEEEEecCCCCHhhhh
Q 040888 476 GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 ~~~~lv~ey~~~GsL~~~L 494 (495)
+..++|+||+++|+|.+++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i 109 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFL 109 (314)
T ss_pred CceEEEEecCCCCcHHHHH
Confidence 9999999999999999886
No 286
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=98.89 E-value=5.4e-09 Score=101.52 Aligned_cols=85 Identities=21% Similarity=0.376 Sum_probs=72.7
Q ss_pred cccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecC
Q 040888 408 ATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 408 ~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
...+.||+|+||.||+|... ++..+++|.+..... ...+.|.+|++++++++|||+++++++|..++..++|+||++
T Consensus 8 ~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 8 EIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE--EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH--HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 44578999999999999985 477889999865422 235678999999999999999999999999999999999999
Q ss_pred CCCHhhhh
Q 040888 487 NGSLHEFL 494 (495)
Q Consensus 487 ~GsL~~~L 494 (495)
+|+|..++
T Consensus 86 ~~~l~~~~ 93 (282)
T cd06643 86 GGAVDAVM 93 (282)
T ss_pred CCcHHHHH
Confidence 99998764
No 287
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.89 E-value=4.8e-09 Score=102.88 Aligned_cols=91 Identities=22% Similarity=0.410 Sum_probs=73.9
Q ss_pred HhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC----
Q 040888 402 TATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG---- 476 (495)
Q Consensus 402 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~---- 476 (495)
...++|+..+.||+|+||.||+|... +|+.||+|+++...........+.+|++++++++|||++++++++...+
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34567888899999999999999985 5889999999754332233457788999999999999999999997654
Q ss_pred ------EEEEEEEecCCCCHhhh
Q 040888 477 ------HNILIYDYYRNGSLHEF 493 (495)
Q Consensus 477 ------~~~lv~ey~~~GsL~~~ 493 (495)
..++|+||+++ ++..+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~ 105 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGL 105 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHH
Confidence 68899999986 55554
No 288
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=98.89 E-value=7.2e-09 Score=101.13 Aligned_cols=90 Identities=19% Similarity=0.333 Sum_probs=74.6
Q ss_pred hccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
++.+|...+.||+|+||.||+|.. .++..||+|++..... ......+.+|++++++++|+||+++.+++..++..++|
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 356788889999999999999987 4688999999865432 12234678899999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
+||++ +++.+++
T Consensus 82 ~e~~~-~~l~~~~ 93 (291)
T cd07870 82 FEYMH-TDLAQYM 93 (291)
T ss_pred Eeccc-CCHHHHH
Confidence 99996 6776553
No 289
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=98.89 E-value=8.4e-09 Score=98.22 Aligned_cols=89 Identities=25% Similarity=0.478 Sum_probs=76.8
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|+||.||++... ++..+|+|++..........+.+.+|++++++++|+|++++.+.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 3666788999999999999984 588999999976543323456789999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++++|.+++
T Consensus 81 ~~~~~L~~~l 90 (258)
T cd08215 81 ADGGDLSQKI 90 (258)
T ss_pred cCCCcHHHHH
Confidence 9999998875
No 290
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.89 E-value=7.6e-09 Score=100.54 Aligned_cols=86 Identities=33% Similarity=0.522 Sum_probs=70.5
Q ss_pred cccceeccCCceEEEEEEc-----CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEEEE
Q 040888 408 ATGRLLGEGTIGRVYRAKY-----PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHNIL 480 (495)
Q Consensus 408 ~~~~~iG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~l 480 (495)
...+.||+|+||+||.+.+ .++..||+|.+..... ....+.|.+|++++++++||||+++.++|... ...++
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG-QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 5678899999999988653 3578999999875422 12356788999999999999999999998764 35789
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 86 v~e~~~~~~l~~~~ 99 (283)
T cd05080 86 IMEYVPLGSLRDYL 99 (283)
T ss_pred EecCCCCCCHHHHH
Confidence 99999999998875
No 291
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=98.89 E-value=9.1e-09 Score=98.51 Aligned_cols=88 Identities=24% Similarity=0.412 Sum_probs=76.7
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|... +++.+|+|.+..... ...+.+.+|++++++++||||+++++++...+..+++||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e 80 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG--DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME 80 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch--hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence 46777899999999999999874 578899999875432 235788999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++++|.+++
T Consensus 81 ~~~~~~l~~~~ 91 (262)
T cd06613 81 YCGGGSLQDIY 91 (262)
T ss_pred CCCCCcHHHHH
Confidence 99999998875
No 292
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=98.89 E-value=5.1e-09 Score=101.64 Aligned_cols=88 Identities=17% Similarity=0.252 Sum_probs=70.1
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHH-HhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQN-ISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+++.. +|..||+|++...... ....++..|+.. ++..+|||++++++++..++..++|+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS-QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc-HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 36777899999999999999985 6999999998754322 123455666665 66679999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
|||+ |+|.+++
T Consensus 80 e~~~-~~l~~~l 90 (283)
T cd06617 80 EVMD-TSLDKFY 90 (283)
T ss_pred hhhc-ccHHHHH
Confidence 9997 6776654
No 293
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.89 E-value=4.9e-09 Score=104.42 Aligned_cols=94 Identities=20% Similarity=0.292 Sum_probs=76.3
Q ss_pred HHHhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe-CCE
Q 040888 400 LLTATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE-QGH 477 (495)
Q Consensus 400 ~~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~-~~~ 477 (495)
+...+++|...+.||+|+||.||++... ++..||+|++..........+.+.+|++++.+++||||+++.++|.. .+.
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3446778999999999999999999864 68999999986543222335678899999999999999999999876 457
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++|+||+ +++|.+++
T Consensus 85 ~~lv~e~~-~~~L~~~~ 100 (328)
T cd07856 85 IYFVTELL-GTDLHRLL 100 (328)
T ss_pred EEEEeehh-ccCHHHHH
Confidence 88999999 46887765
No 294
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=98.88 E-value=6.4e-09 Score=103.40 Aligned_cols=84 Identities=19% Similarity=0.322 Sum_probs=66.8
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHH-HHHhcCCCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIV-QNISRIRHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~-~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||.||+|+.. +++.||+|++...... ......+..|. .++..++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999985 5789999998754221 11223444444 456789999999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 81 ~~L~~~~ 87 (325)
T cd05602 81 GELFYHL 87 (325)
T ss_pred CcHHHHH
Confidence 9998875
No 295
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.88 E-value=5.5e-09 Score=101.43 Aligned_cols=87 Identities=22% Similarity=0.436 Sum_probs=73.5
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
|+..+.||+|++|.||+|... +|..||+|++..........+.+.+|++++++++|||++++++++..++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 445688999999999999874 6999999998754332233467889999999999999999999999999999999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
+ ++|.+++
T Consensus 81 ~-~~l~~~~ 88 (283)
T cd07835 81 D-LDLKKYM 88 (283)
T ss_pred C-cCHHHHH
Confidence 5 6888775
No 296
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=98.88 E-value=8e-09 Score=98.52 Aligned_cols=86 Identities=28% Similarity=0.580 Sum_probs=73.9
Q ss_pred cccceeccCCceEEEEEEcCC-----CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 408 ATGRLLGEGTIGRVYRAKYPD-----GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 408 ~~~~~iG~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
...+.||+|+||.||+++..+ +..||+|.+...... ...+.+..|++.+.+++|+||+++++++...+..+++|
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE-QQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh-HHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 346789999999999999854 378999999765321 13568999999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 81 e~~~~~~l~~~~ 92 (258)
T smart00219 81 EYMEGGDLLDYL 92 (258)
T ss_pred eccCCCCHHHHH
Confidence 999999998876
No 297
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.88 E-value=6.5e-09 Score=103.67 Aligned_cols=86 Identities=16% Similarity=0.204 Sum_probs=66.4
Q ss_pred ccCCcccceeccCCceEEEEEEcC--CCCEEEEEEecCccc---ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP--DGKVLAVKKIDSSHF---QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~--~g~~vavK~l~~~~~---~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
.++|...+.||+|+||+||+|... +++.||||++..... .....+.|.+|+++|.+++|+|+|+.+.. .+..
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~ 93 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKD 93 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCc
Confidence 356888899999999999999874 578889998753211 11224569999999999999999963322 2457
Q ss_pred EEEEEecCCCCHhh
Q 040888 479 ILIYDYYRNGSLHE 492 (495)
Q Consensus 479 ~lv~ey~~~GsL~~ 492 (495)
++||||+++++|..
T Consensus 94 ~LVmE~~~G~~L~~ 107 (365)
T PRK09188 94 GLVRGWTEGVPLHL 107 (365)
T ss_pred EEEEEccCCCCHHH
Confidence 99999999999863
No 298
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.88 E-value=3.4e-09 Score=110.28 Aligned_cols=93 Identities=17% Similarity=0.355 Sum_probs=68.7
Q ss_pred hccCCcccceeccCCceEEEEEEc-----------------CCCCEEEEEEecCccccc------------ccHHHHHHH
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKY-----------------PDGKVLAVKKIDSSHFQR------------ANSESFSEI 453 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~-----------------~~g~~vavK~l~~~~~~~------------~~~~~f~~e 453 (495)
..++|...++||+|+||.||+|.+ ..++.||||++....... ...+.+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 367899999999999999999964 235689999986532110 011234457
Q ss_pred HHHHhcCCCCCc-----ceEEEEEEe--------CCEEEEEEEecCCCCHhhhhC
Q 040888 454 VQNISRIRHTNI-----AELVGFCSE--------QGHNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 454 ~~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lv~ey~~~GsL~~~L~ 495 (495)
+.++.+++|.++ +++++||.. .+..++|||||++|+|.++||
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~ 277 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALD 277 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHh
Confidence 777888877665 678888754 356899999999999999875
No 299
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=98.87 E-value=7.7e-09 Score=99.19 Aligned_cols=83 Identities=22% Similarity=0.322 Sum_probs=71.5
Q ss_pred eccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCCH
Q 040888 413 LGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGSL 490 (495)
Q Consensus 413 iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 490 (495)
||+|+||.||+++.. +++.+|+|.+...... ....+.+.+|++++++++||||+++++++..+...++|+||+++|+|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999985 4889999998754322 12346799999999999999999999999999999999999999999
Q ss_pred hhhhC
Q 040888 491 HEFLH 495 (495)
Q Consensus 491 ~~~L~ 495 (495)
.++++
T Consensus 81 ~~~l~ 85 (262)
T cd05572 81 WTILR 85 (262)
T ss_pred HHHHh
Confidence 98863
No 300
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.87 E-value=9e-09 Score=99.12 Aligned_cols=89 Identities=24% Similarity=0.362 Sum_probs=72.2
Q ss_pred CCcccceeccCCceEEEEEEcCC--CCEEEEEEecCccc--------ccccHHHHHHHHHHHhc-CCCCCcceEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPD--GKVLAVKKIDSSHF--------QRANSESFSEIVQNISR-IRHTNIAELVGFCSE 474 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~--g~~vavK~l~~~~~--------~~~~~~~f~~e~~~l~~-l~H~niv~l~g~~~~ 474 (495)
+|...+.||+|+||.||+|.... ++.+|+|.+..... .....+++.+|+.++.+ ++||||++++++|..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36667899999999999999854 77899998854321 11123557788888875 799999999999999
Q ss_pred CCEEEEEEEecCCCCHhhhh
Q 040888 475 QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 475 ~~~~~lv~ey~~~GsL~~~L 494 (495)
++..++||||+++++|.+++
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l 100 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHF 100 (269)
T ss_pred CCeEEEEEecCCCCcHHHHH
Confidence 99999999999999998765
No 301
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.87 E-value=8e-09 Score=98.84 Aligned_cols=83 Identities=25% Similarity=0.480 Sum_probs=68.7
Q ss_pred ceeccCCceEEEEEEcC--C--CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecC
Q 040888 411 RLLGEGTIGRVYRAKYP--D--GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~--~--g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
+.||+|+||.||+|++. + +..+|+|.+...... ...+++.+|++++++++|+|||++++++.. +..++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCC
Confidence 46899999999999863 2 368999998765432 235679999999999999999999998864 56789999999
Q ss_pred CCCHhhhhC
Q 040888 487 NGSLHEFLH 495 (495)
Q Consensus 487 ~GsL~~~L~ 495 (495)
+|+|.++++
T Consensus 79 ~~~L~~~l~ 87 (257)
T cd05060 79 LGPLLKYLK 87 (257)
T ss_pred CCcHHHHHH
Confidence 999998873
No 302
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=98.87 E-value=2.4e-09 Score=107.16 Aligned_cols=95 Identities=21% Similarity=0.385 Sum_probs=79.5
Q ss_pred HHhccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccc-cHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCE
Q 040888 401 LTATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRA-NSESFSEIVQNISRI-RHTNIAELVGFCSEQGH 477 (495)
Q Consensus 401 ~~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~-~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~ 477 (495)
.+..++|...+.||+|+|++||+|+. ..++.+|||++.+...-+. ..+-...|-+.|.++ .||.||+|+--|.++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 44567888999999999999999987 4699999999987643221 123455777888888 99999999999999999
Q ss_pred EEEEEEecCCCCHhhhhC
Q 040888 478 NILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L~ 495 (495)
.|+|+||++||+|.++|+
T Consensus 149 LYFvLe~A~nGdll~~i~ 166 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIK 166 (604)
T ss_pred eEEEEEecCCCcHHHHHH
Confidence 999999999999999874
No 303
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=98.87 E-value=8e-09 Score=102.31 Aligned_cols=84 Identities=18% Similarity=0.310 Sum_probs=68.8
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhc-CCCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISR-IRHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||.||+|+.. +|..||+|.++..... ....+.+..|.+++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999985 5889999999754221 1223456777878775 4899999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 81 g~L~~~i 87 (316)
T cd05620 81 GDLMFHI 87 (316)
T ss_pred CcHHHHH
Confidence 9998765
No 304
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.87 E-value=4.1e-09 Score=102.38 Aligned_cols=87 Identities=28% Similarity=0.445 Sum_probs=73.2
Q ss_pred CcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
|...+.||+|+||.||+|... ++..||+|++..... ....+.|.+|+.++.+++||||+++++++...+..++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE-GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 455688999999999999863 257899999975432 2234678999999999999999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
++||+++++|.+++
T Consensus 86 ~~e~~~~~~l~~~l 99 (283)
T cd05091 86 IFSYCSHSDLHEFL 99 (283)
T ss_pred EEEcCCCCcHHHHH
Confidence 99999999998876
No 305
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=98.86 E-value=3.9e-09 Score=100.63 Aligned_cols=89 Identities=21% Similarity=0.398 Sum_probs=76.2
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|+..+.||+|+||.||+++. .++..+|+|++...........++.+|++++++++|+||+++.+++......++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 366678999999999999986 4688999999876543333356788999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++++|.+++
T Consensus 81 ~~~~~L~~~~ 90 (256)
T cd08530 81 APFGDLSKAI 90 (256)
T ss_pred cCCCCHHHHH
Confidence 9999998875
No 306
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.86 E-value=1.3e-09 Score=79.76 Aligned_cols=59 Identities=42% Similarity=0.581 Sum_probs=28.4
Q ss_pred CCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCc
Q 040888 140 ELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQ 198 (495)
Q Consensus 140 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 198 (495)
+|++|+|++|+|+...+..|.++++|++|++++|+++...|..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333444444555555555555544444445555555555555554
No 307
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.86 E-value=1.5e-09 Score=79.33 Aligned_cols=61 Identities=41% Similarity=0.597 Sum_probs=55.6
Q ss_pred CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcC
Q 040888 115 PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQL 175 (495)
Q Consensus 115 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l 175 (495)
|+|++|+|++|+|+...+..|.++++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999966667889999999999999999988888999999999999999986
No 308
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.86 E-value=6.5e-09 Score=101.58 Aligned_cols=89 Identities=19% Similarity=0.342 Sum_probs=73.9
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHNILI 481 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv 481 (495)
++|...+.||+|+||.||+|..+ +++.+|+|.++...........+.+|++++.+++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46777899999999999999985 588999999975433222345678899999999999999999999887 789999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
+||++ ++|.+++
T Consensus 85 ~e~~~-~~L~~~~ 96 (293)
T cd07843 85 MEYVE-HDLKSLM 96 (293)
T ss_pred ehhcC-cCHHHHH
Confidence 99997 4887664
No 309
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=98.86 E-value=3.6e-09 Score=105.82 Aligned_cols=89 Identities=25% Similarity=0.494 Sum_probs=72.3
Q ss_pred cCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeC-C
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQ-G 476 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~-~ 476 (495)
+.|...+.||+|+||.||+|... .++.||+|+++.... ....+.+.+|++++.++ +|+||++++++|... .
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT-ASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC-HHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 35777899999999999999742 357899999875432 22245688899999999 899999999998754 4
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++++||+++|+|.++|
T Consensus 86 ~~~~v~ey~~~~~L~~~i 103 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYL 103 (337)
T ss_pred CEEEEEecCCCCCHHHHH
Confidence 678999999999999876
No 310
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=98.86 E-value=7.9e-09 Score=102.87 Aligned_cols=84 Identities=21% Similarity=0.300 Sum_probs=71.1
Q ss_pred ceeccC--CceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEG--TIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G--~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
..||+| +||+||+++. .+|+.||+|.+..........+.+.+|+.++..++||||++++++|..++..++|+||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 346666 8999999997 4699999999875443333356789999999999999999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 84 ~~l~~~l 90 (328)
T cd08226 84 GSANSLL 90 (328)
T ss_pred CCHHHHH
Confidence 9998876
No 311
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.86 E-value=7.3e-09 Score=99.96 Aligned_cols=88 Identities=28% Similarity=0.536 Sum_probs=70.5
Q ss_pred CcccceeccCCceEEEEEEcC----CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC------
Q 040888 407 FATGRLLGEGTIGRVYRAKYP----DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG------ 476 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------ 476 (495)
|...+.||+|+||.||+|.+. .++.||||.+..........+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 345678999999999999863 3678999998764333333567899999999999999999999986542
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++++||+++|+|.+++
T Consensus 81 ~~~~~~~~~~~~~l~~~~ 98 (273)
T cd05074 81 IPMVILPFMKHGDLHTFL 98 (273)
T ss_pred ceEEEEecCCCCcHHHHH
Confidence 247899999999998764
No 312
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.86 E-value=7.5e-09 Score=101.13 Aligned_cols=89 Identities=21% Similarity=0.373 Sum_probs=72.6
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCCE-----
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSEQGH----- 477 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~----- 477 (495)
++|+..+.||+|+||.||+|... +++.||+|+++...........+.+|++++++++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 35777899999999999999974 6899999998754332223467889999999995 6999999999987665
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+++ +|.+++
T Consensus 81 ~~lv~e~~~~-~l~~~~ 96 (295)
T cd07837 81 LYLVFEYLDS-DLKKFM 96 (295)
T ss_pred EEEEeeccCc-CHHHHH
Confidence 7999999985 787764
No 313
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=98.86 E-value=3.5e-10 Score=105.07 Aligned_cols=84 Identities=21% Similarity=0.384 Sum_probs=74.9
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
|+....+|+|+||.|||+.++ .|++||+|.+..+. ..++...|+.+|.+.+.|.+|+.+|.|......++|||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s----DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT----DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc----hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 455688999999999999985 59999999987542 3678999999999999999999999999999999999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
--|++.+.+
T Consensus 111 GAGSiSDI~ 119 (502)
T KOG0574|consen 111 GAGSISDIM 119 (502)
T ss_pred CCCcHHHHH
Confidence 999998765
No 314
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=98.86 E-value=8.2e-09 Score=99.44 Aligned_cols=90 Identities=27% Similarity=0.453 Sum_probs=76.1
Q ss_pred HhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCC---
Q 040888 402 TATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQG--- 476 (495)
Q Consensus 402 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~--- 476 (495)
.++++|...+.||+|++|.||+|... +++.+++|.+..... ..+.|.+|+++++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 35678888999999999999999985 578999999875432 246789999999999 7999999999997644
Q ss_pred ---EEEEEEEecCCCCHhhhh
Q 040888 477 ---HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ---~~~lv~ey~~~GsL~~~L 494 (495)
..++||||+++++|.+++
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~ 100 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLV 100 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHH
Confidence 478999999999998765
No 315
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.86 E-value=1.4e-08 Score=97.70 Aligned_cols=90 Identities=26% Similarity=0.437 Sum_probs=73.5
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccc---ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHF---QRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~ 478 (495)
.+|...+.||+|+||.||+|.. .++..||+|.+..... .....+.|.+|++++++++|+||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4677889999999999999987 4589999998753211 112245788999999999999999999998764 457
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++++||+++++|.+++
T Consensus 82 ~~v~e~~~~~~L~~~~ 97 (264)
T cd06653 82 SIFVEYMPGGSIKDQL 97 (264)
T ss_pred EEEEEeCCCCcHHHHH
Confidence 8999999999998875
No 316
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.86 E-value=1.1e-08 Score=99.63 Aligned_cols=88 Identities=20% Similarity=0.416 Sum_probs=67.2
Q ss_pred CCcccceeccCCceEEEEEEc-C-CCCEEEEEEecCcccccccHHHHHHHHHHHhcC---CCCCcceEEEEEEe-----C
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-P-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI---RHTNIAELVGFCSE-----Q 475 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l---~H~niv~l~g~~~~-----~ 475 (495)
+|...+.||+|+||.||+|+. . +++.||+|+++...........+.+|++++..+ +||||++++++|.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 567788999999999999986 3 478899999875433222344566777776655 79999999999863 3
Q ss_pred CEEEEEEEecCCCCHhhhh
Q 040888 476 GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 ~~~~lv~ey~~~GsL~~~L 494 (495)
...++|+||++ |+|.+++
T Consensus 82 ~~~~lv~e~~~-~~l~~~~ 99 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYL 99 (290)
T ss_pred CcEEEEEccCC-CCHHHHH
Confidence 45789999996 6887765
No 317
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=98.85 E-value=2.2e-09 Score=102.84 Aligned_cols=83 Identities=29% Similarity=0.528 Sum_probs=68.6
Q ss_pred ceeccCCceEEEEEEcCC--------CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 411 RLLGEGTIGRVYRAKYPD--------GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
+.||+|+||.||+|.... ...+|+|.+.... ....+.|.+|+.++..++|||++++++++..++..++||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 358999999999998632 2347888875432 123467899999999999999999999999988999999
Q ss_pred EecCCCCHhhhhC
Q 040888 483 DYYRNGSLHEFLH 495 (495)
Q Consensus 483 ey~~~GsL~~~L~ 495 (495)
||+++|+|.++++
T Consensus 79 e~~~~g~L~~~l~ 91 (258)
T cd05078 79 EYVKFGSLDTYLK 91 (258)
T ss_pred ecCCCCcHHHHHh
Confidence 9999999998873
No 318
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=98.85 E-value=5.8e-09 Score=100.55 Aligned_cols=87 Identities=25% Similarity=0.445 Sum_probs=71.0
Q ss_pred CCcccceeccCCceEEEEEEcCC----CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPD----GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
+|...+.||+|+||.||+|...+ ...||+|....... ....+.|.+|+.++++++||||++++++|.. +..++|
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 45667899999999999998743 24689998865431 2235679999999999999999999999875 457899
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
+||+++|+|.+++
T Consensus 85 ~e~~~~~~L~~~l 97 (270)
T cd05056 85 MELAPLGELRSYL 97 (270)
T ss_pred EEcCCCCcHHHHH
Confidence 9999999999876
No 319
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.85 E-value=9.5e-09 Score=100.23 Aligned_cols=89 Identities=25% Similarity=0.357 Sum_probs=74.2
Q ss_pred CCcccceeccCCceEEEEEEc----CCCCEEEEEEecCcccc--cccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY----PDGKVLAVKKIDSSHFQ--RANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 478 (495)
+|...+.||+|+||.||++.. .+|..||+|++...... ....+.+.+|++++.++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 356678999999999999986 36889999998754221 12246788999999999 599999999999998999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++|+||+++|+|.+++
T Consensus 81 ~lv~e~~~~~~L~~~l 96 (290)
T cd05613 81 HLILDYINGGELFTHL 96 (290)
T ss_pred EEEEecCCCCcHHHHH
Confidence 9999999999999876
No 320
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.85 E-value=6.4e-09 Score=103.80 Aligned_cols=88 Identities=27% Similarity=0.498 Sum_probs=72.9
Q ss_pred CCcccceeccCCceEEEEEEcC--------CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCC
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP--------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQG 476 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~ 476 (495)
+|...+.||+|+||.||++... .+..||+|.+..... ....+++.+|++++.++ +||||++++++|..++
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT-DKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC-HHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 4566789999999999999742 123789998874322 22356799999999999 8999999999999999
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++++||+++|+|.+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l 109 (334)
T cd05100 92 PLYVLVEYASKGNLREYL 109 (334)
T ss_pred ceEEEEecCCCCcHHHHH
Confidence 999999999999999876
No 321
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=98.85 E-value=9e-09 Score=99.91 Aligned_cols=96 Identities=22% Similarity=0.435 Sum_probs=78.6
Q ss_pred cHHHHHHhccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEE
Q 040888 396 SMADLLTATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCS 473 (495)
Q Consensus 396 ~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~ 473 (495)
++.++..+.+.|...+.||+|+||.||+|.. .+++.+|+|.+.... ....++..|+.++.++ +|+||+++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 83 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFI 83 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence 4455666677888889999999999999998 458899999986532 1245688899999998 7999999999986
Q ss_pred e------CCEEEEEEEecCCCCHhhhh
Q 040888 474 E------QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 474 ~------~~~~~lv~ey~~~GsL~~~L 494 (495)
. ....+++|||+++|+|.+++
T Consensus 84 ~~~~~~~~~~~~iv~e~~~~~~L~~~~ 110 (282)
T cd06636 84 KKSPPGHDDQLWLVMEFCGAGSVTDLV 110 (282)
T ss_pred cccccCCCCEEEEEEEeCCCCcHHHHH
Confidence 3 45679999999999998875
No 322
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.85 E-value=1e-08 Score=98.10 Aligned_cols=85 Identities=27% Similarity=0.536 Sum_probs=71.7
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe-CCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE-QGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~e 483 (495)
.+|...+.||+|+||.||++..+ |..||+|.++... ..+.|.+|+.++++++|+|++++++++.. ++..++|+|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 80 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence 35677899999999999999874 7789999986432 24679999999999999999999998754 456899999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 81 ~~~~~~L~~~~ 91 (256)
T cd05082 81 YMAKGSLVDYL 91 (256)
T ss_pred CCCCCcHHHHH
Confidence 99999999876
No 323
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=98.84 E-value=9.3e-09 Score=99.82 Aligned_cols=87 Identities=23% Similarity=0.418 Sum_probs=68.7
Q ss_pred CCcccceeccCCceEEEEEEcC-CCC----EEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGK----VLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~----~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
+|...+.||+|+||.||+|.+. ++. .+++|.+..... ....+++..|+..+++++||||+++++++. ....++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG-RQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc-hHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 5666789999999999999873 444 477787753321 122457888888999999999999999885 455678
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
++||+++|+|.+++
T Consensus 86 i~e~~~~gsL~~~l 99 (279)
T cd05111 86 VTQLSPLGSLLDHV 99 (279)
T ss_pred EEEeCCCCcHHHHH
Confidence 99999999999886
No 324
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=98.84 E-value=7.4e-09 Score=98.89 Aligned_cols=84 Identities=26% Similarity=0.557 Sum_probs=71.3
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
++|...+.||+|+||.||++.. .++.||+|.++... ..+.|.+|+.++.+++|||++++.+++..+ ..++||||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~ 79 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMEL 79 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEEC
Confidence 3466789999999999999975 67789999986532 246789999999999999999999998765 46899999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 80 ~~~~~L~~~l 89 (254)
T cd05083 80 MSKGNLVNFL 89 (254)
T ss_pred CCCCCHHHHH
Confidence 9999999876
No 325
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.83 E-value=4.9e-09 Score=101.86 Aligned_cols=87 Identities=21% Similarity=0.394 Sum_probs=72.6
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
|...+.||+|+||.||+|... +|..||+|++............+.+|++++++++|+||+++++++...+..++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 566788999999999999984 6899999998754332223456788999999999999999999999999999999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
+ |+|.+++
T Consensus 82 ~-~~l~~~~ 89 (284)
T cd07839 82 D-QDLKKYF 89 (284)
T ss_pred C-CCHHHHH
Confidence 7 5777654
No 326
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.83 E-value=1e-08 Score=98.35 Aligned_cols=83 Identities=25% Similarity=0.493 Sum_probs=67.2
Q ss_pred ceeccCCceEEEEEEcC----CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe-CCEEEEEEEec
Q 040888 411 RLLGEGTIGRVYRAKYP----DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE-QGHNILIYDYY 485 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ey~ 485 (495)
+.||+|+||.||+|... ++..||+|++..... ....+.|.+|+.+++.++|||+++++++|.. ++..++|+||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD-LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCC-HHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 46899999999999863 245799999854321 1235678899999999999999999998864 45678999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
++|+|.+++
T Consensus 80 ~~~~L~~~~ 88 (262)
T cd05058 80 KHGDLRNFI 88 (262)
T ss_pred CCCCHHHHH
Confidence 999999886
No 327
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.83 E-value=1.3e-08 Score=102.77 Aligned_cols=89 Identities=19% Similarity=0.243 Sum_probs=71.7
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC------
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG------ 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------ 476 (495)
.++|...+.||+|+||.||++... +|..||||++..........+.+.+|+.++..++||||+++++++...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 467888899999999999999874 5899999999754322233567889999999999999999999986543
Q ss_pred EEEEEEEecCCCCHhhh
Q 040888 477 HNILIYDYYRNGSLHEF 493 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~ 493 (495)
..++||||+++ +|.+.
T Consensus 100 ~~~lv~e~~~~-~l~~~ 115 (359)
T cd07876 100 DVYLVMELMDA-NLCQV 115 (359)
T ss_pred eeEEEEeCCCc-CHHHH
Confidence 46899999975 55544
No 328
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=98.83 E-value=1.1e-08 Score=99.17 Aligned_cols=89 Identities=19% Similarity=0.443 Sum_probs=72.1
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCC----EEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGK----VLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~----~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
.+|...+.||+|+||.||+|.. +++. .||+|.+..... ....+++.+|+.++..++|+||++++++|... ..+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC-HHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 4567789999999999999986 3444 489999865432 22356789999999999999999999999754 467
Q ss_pred EEEEecCCCCHhhhhC
Q 040888 480 LIYDYYRNGSLHEFLH 495 (495)
Q Consensus 480 lv~ey~~~GsL~~~L~ 495 (495)
+++||+++|+|.++++
T Consensus 85 l~~~~~~~g~l~~~l~ 100 (279)
T cd05109 85 LVTQLMPYGCLLDYVR 100 (279)
T ss_pred EEEEcCCCCCHHHHHh
Confidence 9999999999998763
No 329
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=98.83 E-value=1.2e-08 Score=100.42 Aligned_cols=88 Identities=27% Similarity=0.396 Sum_probs=72.3
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
..|...+.||+|+||.||+|+.. +++.||+|++...... ....+++.+|++++++++|||++++.++|..++..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 34667789999999999999874 6899999998643221 122457889999999999999999999999999999999
Q ss_pred EecCCCCHhhh
Q 040888 483 DYYRNGSLHEF 493 (495)
Q Consensus 483 ey~~~GsL~~~ 493 (495)
||++ |++.++
T Consensus 95 e~~~-g~l~~~ 104 (307)
T cd06607 95 EYCL-GSASDI 104 (307)
T ss_pred HhhC-CCHHHH
Confidence 9997 566554
No 330
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.82 E-value=8.6e-09 Score=101.11 Aligned_cols=84 Identities=21% Similarity=0.299 Sum_probs=72.2
Q ss_pred ccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 409 TGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 409 ~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
....||+|+||.||++... +++.||+|.+..... ...+.+.+|+..+..++||||+++++++..++..++|+||+++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 3457999999999999874 689999999865432 2356788999999999999999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 103 ~~L~~~~ 109 (297)
T cd06659 103 GALTDIV 109 (297)
T ss_pred CCHHHHH
Confidence 9998764
No 331
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=98.81 E-value=2.8e-08 Score=94.10 Aligned_cols=87 Identities=25% Similarity=0.440 Sum_probs=76.3
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|...+.||+|++|.||++... ++..+++|++..... ...+.+.+|++.+++++|+|++++++++..+...++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 3566789999999999999985 688999999976532 2357899999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++++|.+++
T Consensus 79 ~~~~~L~~~~ 88 (253)
T cd05122 79 CSGGSLKDLL 88 (253)
T ss_pred CCCCcHHHHH
Confidence 9999998875
No 332
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.81 E-value=1.4e-09 Score=109.51 Aligned_cols=86 Identities=27% Similarity=0.407 Sum_probs=70.7
Q ss_pred CcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccc-cHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRA-NSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~-~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
|+..+.||.|+||.||-|.. .+..+||||++.-...+.. .-++...||..|.+++|||+|...|||..+...||||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 44567899999999999987 5688999999976543221 235789999999999999999999999999999999999
Q ss_pred cCCCCHhhh
Q 040888 485 YRNGSLHEF 493 (495)
Q Consensus 485 ~~~GsL~~~ 493 (495)
|-| +-.+.
T Consensus 108 ClG-SAsDl 115 (948)
T KOG0577|consen 108 CLG-SASDL 115 (948)
T ss_pred Hhc-cHHHH
Confidence 964 54444
No 333
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.81 E-value=7.4e-09 Score=101.29 Aligned_cols=83 Identities=23% Similarity=0.301 Sum_probs=71.9
Q ss_pred cceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCC
Q 040888 410 GRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNG 488 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 488 (495)
...||+|+||.||++.. .++..||||++..... ...+.+.+|+..+++++|+||+++++++...+..++||||++++
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~ 104 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ--QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGG 104 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchH--HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCC
Confidence 46699999999999987 4688999999865332 23567899999999999999999999999999999999999999
Q ss_pred CHhhhh
Q 040888 489 SLHEFL 494 (495)
Q Consensus 489 sL~~~L 494 (495)
+|.+++
T Consensus 105 ~L~~~~ 110 (292)
T cd06658 105 ALTDIV 110 (292)
T ss_pred cHHHHH
Confidence 998875
No 334
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.80 E-value=1.7e-08 Score=99.41 Aligned_cols=90 Identities=28% Similarity=0.424 Sum_probs=72.4
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHNIL 480 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~l 480 (495)
.++|...+.||+|+||.||+|... +|+.||+|+++...........+.+|++++.+++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 457888899999999999999984 589999999875432222234567899999999999999999999765 46799
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
|+||+++ +|.+++
T Consensus 86 v~e~~~~-~l~~~l 98 (309)
T cd07845 86 VMEYCEQ-DLASLL 98 (309)
T ss_pred EEecCCC-CHHHHH
Confidence 9999974 776654
No 335
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.80 E-value=3.3e-09 Score=108.50 Aligned_cols=159 Identities=31% Similarity=0.475 Sum_probs=121.1
Q ss_pred CcccEEecCCCEe---EEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC-C--CCcEEECcCCcCCCCcch
Q 040888 60 HWKGITCSGSSVT---EIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP-P--NLKHLDLSENQFSGTVPY 133 (495)
Q Consensus 60 ~w~gv~c~~~~v~---~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~--~L~~L~Ls~N~l~g~~p~ 133 (495)
.+.+..+....+. .+++..+.+...+. .+..++.++.|++.+|.++. +|.... . +|+.|++++|++. .+|.
T Consensus 81 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~ 157 (394)
T COG4886 81 SSLDGSENLLNLLPLPSLDLNLNRLRSNIS-ELLELTNLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPS 157 (394)
T ss_pred ccccccccccCCCCCceeeccccccccCch-hhhcccceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhh
Confidence 4445555544555 58888888754443 35556889999999999984 444443 3 8999999999998 7777
Q ss_pred hccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-Cc
Q 040888 134 SISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LD 212 (495)
Q Consensus 134 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~ 212 (495)
.+..+++|+.|++++|+++ .+|.....++.|+.|++++|+++ .+|.....+..|++|++++|.+.-.+..+..+. +.
T Consensus 158 ~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~ 235 (394)
T COG4886 158 PLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLS 235 (394)
T ss_pred hhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhccccc
Confidence 8899999999999999998 55665557889999999999998 778777677779999999996544444444444 67
Q ss_pred EEEeecCCCcc
Q 040888 213 ELNVENNKFSG 223 (495)
Q Consensus 213 ~l~l~~N~l~g 223 (495)
.+.+.+|++..
T Consensus 236 ~l~l~~n~~~~ 246 (394)
T COG4886 236 GLELSNNKLED 246 (394)
T ss_pred ccccCCceeee
Confidence 77788888764
No 336
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.80 E-value=6.4e-09 Score=100.54 Aligned_cols=90 Identities=22% Similarity=0.397 Sum_probs=76.6
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCCEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIR-HTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv 481 (495)
++|...+.||+|+||.||+++.. +++.||+|++...... ....+.+.+|++++.+++ |+||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 35777889999999999999985 6899999998754321 122467889999999998 99999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 81 ~e~~~~~~L~~~l 93 (280)
T cd05581 81 LEYAPNGELLQYI 93 (280)
T ss_pred EcCCCCCcHHHHH
Confidence 9999999998876
No 337
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.80 E-value=2.5e-08 Score=97.17 Aligned_cols=86 Identities=23% Similarity=0.315 Sum_probs=73.5
Q ss_pred CcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
|...+.||+|++|.||++.. .+++.+++|++..... ...+.+.+|+.++++++|+|++++++++...+..++|+||+
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEecc
Confidence 44457999999999999986 4688999999864322 22456889999999999999999999999999999999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
++++|.+++
T Consensus 99 ~~~~L~~~~ 107 (285)
T cd06648 99 EGGALTDIV 107 (285)
T ss_pred CCCCHHHHH
Confidence 999998875
No 338
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.80 E-value=1.8e-08 Score=97.80 Aligned_cols=87 Identities=25% Similarity=0.492 Sum_probs=72.5
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEEEEEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHNILIYD 483 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~e 483 (495)
|...+.||+|+||.||+|+.. +++.+|+|++..........+.+.+|++++.+++|+|++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 345688999999999999985 588999999986532223346788999999999999999999999988 78999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++ +|.+++
T Consensus 81 ~~~~-~l~~~~ 90 (287)
T cd07840 81 YMDH-DLTGLL 90 (287)
T ss_pred cccc-cHHHHH
Confidence 9975 887764
No 339
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.80 E-value=1.9e-08 Score=102.70 Aligned_cols=82 Identities=18% Similarity=0.219 Sum_probs=71.0
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|.. .+++.||+|... .+.+.+|++++++++|||||++++++......++|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 35799999999999999999987 468899999753 234678999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+. |+|.+++
T Consensus 163 e~~~-~~L~~~l 173 (391)
T PHA03212 163 PRYK-TDLYCYL 173 (391)
T ss_pred ecCC-CCHHHHH
Confidence 9995 6887664
No 340
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.79 E-value=1.8e-08 Score=98.52 Aligned_cols=83 Identities=24% Similarity=0.336 Sum_probs=71.9
Q ss_pred cceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCC
Q 040888 410 GRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNG 488 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 488 (495)
...||+|+||.||++.. .++..||||++..... .....+.+|+.++++++|+|++++++++...+..++||||++++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccch--hHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 36799999999999988 4689999999864322 23567899999999999999999999999999999999999999
Q ss_pred CHhhhh
Q 040888 489 SLHEFL 494 (495)
Q Consensus 489 sL~~~L 494 (495)
+|.+++
T Consensus 103 ~L~~~~ 108 (292)
T cd06657 103 ALTDIV 108 (292)
T ss_pred cHHHHH
Confidence 998765
No 341
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=98.79 E-value=2.5e-08 Score=98.79 Aligned_cols=87 Identities=30% Similarity=0.437 Sum_probs=71.8
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
|...+.||+|+||.||+++.. ++..||+|++...... ....+.+.+|++++++++|||+++++++|..++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 556788999999999999974 6889999998654221 12245788999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
++ |+|.+.+
T Consensus 107 ~~-g~l~~~~ 115 (317)
T cd06635 107 CL-GSASDLL 115 (317)
T ss_pred CC-CCHHHHH
Confidence 97 5776654
No 342
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.79 E-value=3.9e-09 Score=99.15 Aligned_cols=93 Identities=27% Similarity=0.405 Sum_probs=80.6
Q ss_pred cHHHHHHhccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEE
Q 040888 396 SMADLLTATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCS 473 (495)
Q Consensus 396 ~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~ 473 (495)
+++|+-+-| .++||+|+|+.|-.|+. .+|..+|||++.+.. ...+....+|++++... .|+||++|+.++.
T Consensus 74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--gHsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--GHSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCC--chHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 478887777 48899999999999985 679999999998752 33466788999999988 6999999999999
Q ss_pred eCCEEEEEEEecCCCCHhhhhC
Q 040888 474 EQGHNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 474 ~~~~~~lv~ey~~~GsL~~~L~ 495 (495)
++...|||||-|.+|.|..+|+
T Consensus 147 dd~~FYLVfEKm~GGplLshI~ 168 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQ 168 (463)
T ss_pred ccceEEEEEecccCchHHHHHH
Confidence 9999999999999999988864
No 343
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.78 E-value=2.1e-08 Score=100.50 Aligned_cols=91 Identities=15% Similarity=0.254 Sum_probs=73.0
Q ss_pred hccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC-----
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG----- 476 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----- 476 (495)
..++|...+.||+|+||.||++.. .++..||||++..........+.+.+|++++.+++||||+++++++...+
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 456788889999999999999986 46899999998643222223456889999999999999999999987653
Q ss_pred -EEEEEEEecCCCCHhhhh
Q 040888 477 -HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 -~~~lv~ey~~~GsL~~~L 494 (495)
..++||||+ +++|.+++
T Consensus 93 ~~~~lv~e~~-~~~l~~~~ 110 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLM 110 (343)
T ss_pred ceEEEEEecC-CCCHHHHH
Confidence 358999999 67887664
No 344
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.77 E-value=2.4e-08 Score=100.22 Aligned_cols=99 Identities=15% Similarity=0.214 Sum_probs=78.6
Q ss_pred ccHHHHHHhccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEE
Q 040888 395 FSMADLLTATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCS 473 (495)
Q Consensus 395 ~~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~ 473 (495)
....++..++++|...+.||+|+||.||+|.. .+++.||+|++..........+.+.+|++++.+++||||+++.+++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 34567777889999999999999999999986 56889999999754322223456889999999999999999999886
Q ss_pred eC------CEEEEEEEecCCCCHhhhh
Q 040888 474 EQ------GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 474 ~~------~~~~lv~ey~~~GsL~~~L 494 (495)
.. ...++++|++ +++|.+++
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~ 112 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIV 112 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHH
Confidence 43 2367888876 77887654
No 345
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.77 E-value=2.3e-08 Score=98.36 Aligned_cols=89 Identities=18% Similarity=0.424 Sum_probs=70.9
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC-------
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG------- 476 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------- 476 (495)
++|...+.||+|+||.||+|... +++.||||++............+.+|++++++++||||++++++|...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 46778899999999999999974 5899999998654322223445678999999999999999999997654
Q ss_pred -EEEEEEEecCCCCHhhhh
Q 040888 477 -HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 -~~~lv~ey~~~GsL~~~L 494 (495)
..++||||+++ +|.+++
T Consensus 92 ~~~~lv~e~~~~-~l~~~l 109 (310)
T cd07865 92 GSFYLVFEFCEH-DLAGLL 109 (310)
T ss_pred ceEEEEEcCCCc-CHHHHH
Confidence 34899999974 776654
No 346
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=98.76 E-value=1.4e-08 Score=97.22 Aligned_cols=82 Identities=21% Similarity=0.354 Sum_probs=70.6
Q ss_pred eccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCCH
Q 040888 413 LGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGSL 490 (495)
Q Consensus 413 iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 490 (495)
||+|+||.||+++.. +|+.+++|.+...... ....+.+.+|++++.+++|+||+++++.+..+...++|+||+++|+|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999986 4899999998754321 12356788999999999999999999999999999999999999999
Q ss_pred hhhh
Q 040888 491 HEFL 494 (495)
Q Consensus 491 ~~~L 494 (495)
.+++
T Consensus 81 ~~~l 84 (265)
T cd05579 81 ASLL 84 (265)
T ss_pred HHHH
Confidence 8875
No 347
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.76 E-value=1.9e-09 Score=100.90 Aligned_cols=91 Identities=24% Similarity=0.353 Sum_probs=74.4
Q ss_pred ccCCcccceeccCCceEEEEEEcC---C--CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe-CCE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP---D--GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE-QGH 477 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~---~--g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~-~~~ 477 (495)
...|.....||+|.||.||+|+-. + ...+|+|+++......+....-.+|+.++++++|||+|.|..++.. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 445777889999999999999753 2 2378999998764444446678899999999999999999999987 778
Q ss_pred EEEEEEecCCCCHhhhhC
Q 040888 478 NILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L~ 495 (495)
.+++|||.+. ||.+.||
T Consensus 103 v~l~fdYAEh-DL~~II~ 119 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIK 119 (438)
T ss_pred EEEEehhhhh-hHHHHHH
Confidence 8999999986 7877664
No 348
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.76 E-value=2.2e-08 Score=103.84 Aligned_cols=84 Identities=18% Similarity=0.368 Sum_probs=66.7
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC-------
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ------- 475 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~------- 475 (495)
..+|...+.||+|+||.||+|... +++.||||++.... ....+|+.++++++|||||++.+++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 457888999999999999999974 68899999885431 2345799999999999999999987542
Q ss_pred -CEEEEEEEecCCCCHhhhh
Q 040888 476 -GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 -~~~~lv~ey~~~GsL~~~L 494 (495)
...++||||+++ +|.+++
T Consensus 139 ~~~l~lvmE~~~~-~l~~~~ 157 (440)
T PTZ00036 139 NIFLNVVMEFIPQ-TVHKYM 157 (440)
T ss_pred ceEEEEEEecCCc-cHHHHH
Confidence 246689999985 665543
No 349
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.76 E-value=3.4e-08 Score=97.41 Aligned_cols=87 Identities=30% Similarity=0.490 Sum_probs=70.9
Q ss_pred CcccceeccCCceEEEEEEcC---CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP---DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHNIL 480 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~l 480 (495)
|...+.||+|+||.||+|+.. ++..||+|.+..... .....+.+.+|++++.+++||||+++++++... +..++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 566788999999999999984 478999999976431 122346778899999999999999999999988 78999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++ +|.+++
T Consensus 82 v~e~~~~-~l~~~~ 94 (316)
T cd07842 82 LFDYAEH-DLWQII 94 (316)
T ss_pred EEeCCCc-CHHHHH
Confidence 9999975 565543
No 350
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.76 E-value=2e-08 Score=98.75 Aligned_cols=88 Identities=19% Similarity=0.452 Sum_probs=70.2
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCC----EEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGK----VLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~----~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
++|...+.||+|+||.||+|... +|. .||+|.+..... .....+|.+|+.++++++||||++++|+|... ..+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 35666789999999999999863 343 578888865422 12234788999999999999999999999764 467
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+++||+++|+|.+++
T Consensus 85 ~v~e~~~~g~l~~~~ 99 (303)
T cd05110 85 LVTQLMPHGCLLDYV 99 (303)
T ss_pred eeehhcCCCCHHHHH
Confidence 899999999998875
No 351
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.75 E-value=1.8e-08 Score=100.99 Aligned_cols=91 Identities=15% Similarity=0.237 Sum_probs=72.6
Q ss_pred hccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC------
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ------ 475 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~------ 475 (495)
..+.|...+.||+|+||.||+|.. .++..||||++..........+.+.+|++++.+++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 456788889999999999999987 4688999999875432222345678999999999999999999988643
Q ss_pred CEEEEEEEecCCCCHhhhh
Q 040888 476 GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 ~~~~lv~ey~~~GsL~~~L 494 (495)
...++++|++ +++|.+++
T Consensus 93 ~~~~~~~~~~-~~~l~~~~ 110 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIV 110 (343)
T ss_pred CcEEEEeecC-CCCHHHHH
Confidence 3468999988 67887764
No 352
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.75 E-value=3.2e-08 Score=96.32 Aligned_cols=87 Identities=24% Similarity=0.445 Sum_probs=66.6
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcC---CCCCcceEEEEEEeC-----CE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI---RHTNIAELVGFCSEQ-----GH 477 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l---~H~niv~l~g~~~~~-----~~ 477 (495)
|...+.||+|+||.||+|... +++.||+|.+............+.+|++++.++ +||||+++++++... ..
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 566789999999999999875 688999999875432222234566777777655 799999999998652 35
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||++ ++|.+++
T Consensus 82 ~~lv~e~~~-~~l~~~~ 97 (288)
T cd07863 82 VTLVFEHVD-QDLRTYL 97 (288)
T ss_pred EEEEEcccc-cCHHHHH
Confidence 789999998 4787765
No 353
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=98.74 E-value=2.6e-08 Score=97.08 Aligned_cols=89 Identities=26% Similarity=0.359 Sum_probs=73.3
Q ss_pred CCcccceeccCCceEEEEEEc----CCCCEEEEEEecCcccc--cccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY----PDGKVLAVKKIDSSHFQ--RANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 478 (495)
+|...+.||+|+||.||+++. .++..||||.+...... ....+.+.+|++++.++ +|+||+++.+.+..++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 356678999999999999975 35788999998753221 12245688999999999 599999999999999999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+++|+|.+++
T Consensus 81 ~lv~e~~~~~~L~~~~ 96 (288)
T cd05583 81 HLILDYVNGGELFTHL 96 (288)
T ss_pred EEEEecCCCCcHHHHH
Confidence 9999999999998875
No 354
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.74 E-value=2.2e-08 Score=100.05 Aligned_cols=90 Identities=21% Similarity=0.363 Sum_probs=72.1
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeC--CEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQ--GHNI 479 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~--~~~~ 479 (495)
.++|...+.||+|+||.||+|... ++..+|+|++............+.+|+.++.++ +||||++++++|... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 456777899999999999999975 588999999864322222345677899999999 999999999998654 3679
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||++ ++|.+++
T Consensus 86 lv~e~~~-~~L~~~~ 99 (337)
T cd07852 86 LVFEYME-TDLHAVI 99 (337)
T ss_pred EEecccc-cCHHHHH
Confidence 9999997 5888765
No 355
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=98.73 E-value=1.3e-08 Score=97.43 Aligned_cols=89 Identities=21% Similarity=0.353 Sum_probs=71.7
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe-----CCEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE-----QGHNI 479 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~-----~~~~~ 479 (495)
.|...+.||+|+||.|.+++. .+|..||+|++...-......++-.+|+++|+.++|+||+.+.+.+.. -...|
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY 102 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY 102 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence 444468899999999999998 568999999997432222345778899999999999999999999876 34689
Q ss_pred EEEEecCCCCHhhhhC
Q 040888 480 LIYDYYRNGSLHEFLH 495 (495)
Q Consensus 480 lv~ey~~~GsL~~~L~ 495 (495)
+|+|+|+. ||++.|+
T Consensus 103 iV~elMet-DL~~iik 117 (359)
T KOG0660|consen 103 LVFELMET-DLHQIIK 117 (359)
T ss_pred EehhHHhh-HHHHHHH
Confidence 99999954 8877653
No 356
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.73 E-value=3.5e-08 Score=98.89 Aligned_cols=88 Identities=17% Similarity=0.301 Sum_probs=70.8
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC------E
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG------H 477 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------~ 477 (495)
++|...+.||+|+||.||+|+. .+|+.||||++............+.+|++++.+++||||+++++++.... .
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 6788889999999999999997 46899999998754222223456889999999999999999999987542 4
Q ss_pred EEEEEEecCCCCHhhh
Q 040888 478 NILIYDYYRNGSLHEF 493 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~ 493 (495)
.++|+||+.. +|.++
T Consensus 95 ~~lv~e~~~~-~l~~~ 109 (342)
T cd07879 95 FYLVMPYMQT-DLQKI 109 (342)
T ss_pred EEEEeccccc-CHHHH
Confidence 5899999964 66654
No 357
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.72 E-value=3.9e-08 Score=99.40 Aligned_cols=89 Identities=16% Similarity=0.231 Sum_probs=71.4
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC------C
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ------G 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~------~ 476 (495)
.++|...+.||+|+||.||++... .++.||||++..........+.+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 467888899999999999999874 588999999975432223356788999999999999999999988643 3
Q ss_pred EEEEEEEecCCCCHhhh
Q 040888 477 HNILIYDYYRNGSLHEF 493 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~ 493 (495)
..++||||+++ +|.++
T Consensus 103 ~~~lv~e~~~~-~l~~~ 118 (364)
T cd07875 103 DVYIVMELMDA-NLCQV 118 (364)
T ss_pred eEEEEEeCCCC-CHHHH
Confidence 46899999975 56554
No 358
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.72 E-value=3.5e-08 Score=99.36 Aligned_cols=90 Identities=17% Similarity=0.239 Sum_probs=72.0
Q ss_pred hccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC-----
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG----- 476 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----- 476 (495)
..++|...+.||+|+||.||++... .++.||||++..........+.+.+|+.+++.++||||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 3467888899999999999999874 5889999999754332233567889999999999999999999986542
Q ss_pred -EEEEEEEecCCCCHhhh
Q 040888 477 -HNILIYDYYRNGSLHEF 493 (495)
Q Consensus 477 -~~~lv~ey~~~GsL~~~ 493 (495)
..++||||+++ ++.++
T Consensus 95 ~~~~lv~e~~~~-~l~~~ 111 (355)
T cd07874 95 QDVYLVMELMDA-NLCQV 111 (355)
T ss_pred ceeEEEhhhhcc-cHHHH
Confidence 46899999975 56554
No 359
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=98.71 E-value=2.2e-08 Score=105.95 Aligned_cols=87 Identities=22% Similarity=0.408 Sum_probs=70.7
Q ss_pred CCcccceeccCCceEEEEEEcCCC-CEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEE-EEEeC------C
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPDG-KVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVG-FCSEQ------G 476 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~g-~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g-~~~~~------~ 476 (495)
.+...+.|.+|||+.||.+....+ ..+|+|++-... ....+...+||++|+.++ |+|||.+++ ..... -
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d--e~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVND--EEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCC--HHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 345578999999999999998665 999999986542 234678899999999997 999999999 33221 2
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
+.+|.||||++|.|-+++
T Consensus 116 EvllLmEyC~gg~Lvd~m 133 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFM 133 (738)
T ss_pred EEEeehhhccCCcHHHHH
Confidence 578999999999998875
No 360
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.71 E-value=4.7e-08 Score=97.55 Aligned_cols=84 Identities=29% Similarity=0.391 Sum_probs=69.1
Q ss_pred cceeccCCceEEEEEEcC-CCCEEEEEEecCcccccc------------cHHHHHHHHHHHhcCCCCCcceEEEEEEeCC
Q 040888 410 GRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRA------------NSESFSEIVQNISRIRHTNIAELVGFCSEQG 476 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~------------~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (495)
.+.||+|+||.||+|... +++.||||++........ ....+.+|++++++++|+||+++++++...+
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 477999999999999974 689999999865322110 0125778999999999999999999999999
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++|+||++ |+|.+++
T Consensus 94 ~~~lv~e~~~-~~l~~~l 110 (335)
T PTZ00024 94 FINLVMDIMA-SDLKKVV 110 (335)
T ss_pred cEEEEEeccc-cCHHHHH
Confidence 9999999997 6888765
No 361
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=98.71 E-value=3.9e-08 Score=97.93 Aligned_cols=82 Identities=21% Similarity=0.280 Sum_probs=65.6
Q ss_pred eccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcC---CCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 413 LGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRI---RHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 413 iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l---~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
||+|+||.||+|+.. +++.||||++....... .....+..|..++.+. +||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999874 58999999986532211 1223455677777665 799999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 81 g~L~~~l 87 (330)
T cd05586 81 GELFWHL 87 (330)
T ss_pred ChHHHHH
Confidence 9998765
No 362
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.70 E-value=2.4e-08 Score=107.27 Aligned_cols=95 Identities=27% Similarity=0.486 Sum_probs=78.6
Q ss_pred HHHhccCCcccceeccCCceEEEEEEcC----C----CCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEE
Q 040888 400 LLTATANFATGRLLGEGTIGRVYRAKYP----D----GKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVG 470 (495)
Q Consensus 400 ~~~~t~~f~~~~~iG~G~~g~Vy~~~~~----~----g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g 470 (495)
++...+++...+.+|+|.||.|++|... . ...||||.+...... ...+.+..|+++|..+ +|+|+|.++|
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 3344455555679999999999999863 1 457999999876543 3467899999999998 6999999999
Q ss_pred EEEeCCEEEEEEEecCCCCHhhhhC
Q 040888 471 FCSEQGHNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 471 ~~~~~~~~~lv~ey~~~GsL~~~L~ 495 (495)
+|..++..++|.||++.|+|.++|+
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr 394 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLR 394 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHH
Confidence 9999999999999999999999874
No 363
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.70 E-value=5.9e-08 Score=95.99 Aligned_cols=80 Identities=28% Similarity=0.464 Sum_probs=64.8
Q ss_pred cceeccCCceEEEEEEcC---CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe--CCEEEEEEEe
Q 040888 410 GRLLGEGTIGRVYRAKYP---DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE--QGHNILIYDY 484 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ey 484 (495)
.+.||+|+||.||+|... +++.||+|.+..... ...+.+|++++++++||||+++++++.. +...++|+||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 468999999999999864 467899999865422 3467889999999999999999999864 4567899999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++ +|.+++
T Consensus 82 ~~~-~l~~~~ 90 (317)
T cd07868 82 AEH-DLWHII 90 (317)
T ss_pred cCC-CHHHHH
Confidence 964 776654
No 364
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.70 E-value=5.4e-08 Score=101.06 Aligned_cols=82 Identities=24% Similarity=0.299 Sum_probs=70.3
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
..+|.....||+|+||.||+|..+ .++.||||... ...+.+|++++++++|+|||++++++..++..++||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 346888899999999999999985 48899999632 234678999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+. |+|.+++
T Consensus 240 e~~~-~~L~~~l 250 (461)
T PHA03211 240 PKYR-SDLYTYL 250 (461)
T ss_pred EccC-CCHHHHH
Confidence 9995 7888765
No 365
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.70 E-value=6.5e-08 Score=95.58 Aligned_cols=80 Identities=29% Similarity=0.466 Sum_probs=64.5
Q ss_pred cceeccCCceEEEEEEcC---CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe--CCEEEEEEEe
Q 040888 410 GRLLGEGTIGRVYRAKYP---DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE--QGHNILIYDY 484 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ey 484 (495)
...||+|+||.||+|+.. ++..||+|.+..... ...+.+|++++++++||||+++++++.. +...++|+||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 467999999999999974 357899999865422 3467899999999999999999999854 4567899999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++ +|.+++
T Consensus 82 ~~~-~l~~~~ 90 (317)
T cd07867 82 AEH-DLWHII 90 (317)
T ss_pred eCC-cHHHHH
Confidence 975 665543
No 366
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=98.70 E-value=8.9e-08 Score=94.66 Aligned_cols=87 Identities=28% Similarity=0.411 Sum_probs=70.8
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
|...+.||+|+||+||+|+.. ++..|++|++...... ....+.+.+|++++++++|||++++++++...+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 444577999999999999874 5889999998654321 12235688999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+. |++.+++
T Consensus 103 ~~-~~l~~~l 111 (313)
T cd06633 103 CL-GSASDLL 111 (313)
T ss_pred CC-CCHHHHH
Confidence 96 5666553
No 367
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.70 E-value=2.7e-08 Score=99.32 Aligned_cols=89 Identities=19% Similarity=0.269 Sum_probs=72.5
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe----CCEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE----QGHNI 479 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~----~~~~~ 479 (495)
++|...+.||+|+||.||+|... +|..||+|++..........+.+.+|+.++.+++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 56778899999999999999874 58999999987543222335677889999999999999999998764 34678
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+|+||+. |+|.+++
T Consensus 85 lv~e~~~-~~l~~~~ 98 (334)
T cd07855 85 VVMDLME-SDLHHII 98 (334)
T ss_pred EEEehhh-hhHHHHh
Confidence 9999995 6888775
No 368
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=98.69 E-value=7.2e-08 Score=89.70 Aligned_cols=87 Identities=29% Similarity=0.602 Sum_probs=75.2
Q ss_pred CcccceeccCCceEEEEEEcCC-CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 407 FATGRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
|...+.||+|++|.||++...+ +..+|+|.+...... ...+.+.+|++.+.+++|+|++++++++......++++||+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 3456889999999999999865 889999999765332 13568899999999999999999999999989999999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
++++|.+++
T Consensus 80 ~~~~L~~~~ 88 (225)
T smart00221 80 EGGDLFDYL 88 (225)
T ss_pred CCCCHHHHH
Confidence 999998876
No 369
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.69 E-value=2.3e-08 Score=96.78 Aligned_cols=87 Identities=25% Similarity=0.461 Sum_probs=73.5
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
|+..+.||+|.+|.||+|+.. +++.+|+|.+..........+.+..|++++++++|+|++++++++...+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 344678999999999999985 5899999999765322233567889999999999999999999999999999999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
+ ++|.+++
T Consensus 81 ~-~~l~~~i 88 (282)
T cd07829 81 D-MDLKKYL 88 (282)
T ss_pred C-cCHHHHH
Confidence 8 5898876
No 370
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.69 E-value=3.9e-08 Score=97.05 Aligned_cols=83 Identities=17% Similarity=0.216 Sum_probs=67.8
Q ss_pred ceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCCH
Q 040888 411 RLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGSL 490 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 490 (495)
+.+|.|+++.||++.. +++.||||++..........+.+.+|++++++++|+||+++++++...+..+++|||+++|+|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 4455666666666665 788999999976432233356799999999999999999999999999999999999999999
Q ss_pred hhhh
Q 040888 491 HEFL 494 (495)
Q Consensus 491 ~~~L 494 (495)
.+++
T Consensus 87 ~~~l 90 (314)
T cd08216 87 EDLL 90 (314)
T ss_pred HHHH
Confidence 8876
No 371
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.68 E-value=2.5e-08 Score=96.74 Aligned_cols=86 Identities=24% Similarity=0.500 Sum_probs=71.0
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCCEEEEEEEe
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey 484 (495)
|...+.||+|++|.||+|+.. +++.||+|++...... .......+|+..+.+++ |+|++++++++..++..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 445688999999999999985 4789999998654321 12334567999999999 99999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+ +|+|.+++
T Consensus 80 ~-~~~l~~~~ 88 (283)
T cd07830 80 M-EGNLYQLM 88 (283)
T ss_pred C-CCCHHHHH
Confidence 9 78998765
No 372
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.68 E-value=1.6e-08 Score=103.89 Aligned_cols=83 Identities=31% Similarity=0.452 Sum_probs=71.3
Q ss_pred ceeccCCceEEEEEEcCC-CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCC
Q 040888 411 RLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGS 489 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 489 (495)
-++|+|.||+||.|...+ ...+|||.+..... ...+-..+||.+-++++|+|||+.+|.|.++++.-+.||-+|||+
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds--r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS--REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccc--hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 359999999999999854 55789999975432 234568899999999999999999999999999999999999999
Q ss_pred HhhhhC
Q 040888 490 LHEFLH 495 (495)
Q Consensus 490 L~~~L~ 495 (495)
|...|+
T Consensus 659 LSsLLr 664 (1226)
T KOG4279|consen 659 LSSLLR 664 (1226)
T ss_pred HHHHHH
Confidence 988764
No 373
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.68 E-value=7.3e-08 Score=93.34 Aligned_cols=86 Identities=23% Similarity=0.361 Sum_probs=68.3
Q ss_pred CcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEeC--CEEEEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSEQ--GHNILIY 482 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~--~~~~lv~ 482 (495)
|...+.||+|+||.||+|+. .+++.||+|++....... ......+|+..+.++. |+|++++++++... +..++|+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL-EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc-hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 34467899999999999997 468899999987542221 2234567888999885 99999999999987 8899999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||++ |+|.+++
T Consensus 80 e~~~-~~l~~~l 90 (282)
T cd07831 80 ELMD-MNLYELI 90 (282)
T ss_pred ecCC-ccHHHHH
Confidence 9997 5777664
No 374
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=98.68 E-value=9.1e-08 Score=92.91 Aligned_cols=83 Identities=22% Similarity=0.270 Sum_probs=64.0
Q ss_pred eeccCCceEEEEEEcC-CCCEEEEEEecCcccccc-cHHHHHHHHHH---HhcCCCCCcceEEEEEEeCCEEEEEEEecC
Q 040888 412 LLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRA-NSESFSEIVQN---ISRIRHTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 412 ~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~-~~~~f~~e~~~---l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
+||+|+||.||++... +++.+|+|.+........ ....+.+|..+ +...+|||++.+.+++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999874 589999999875432211 12334445433 334579999999999999999999999999
Q ss_pred CCCHhhhh
Q 040888 487 NGSLHEFL 494 (495)
Q Consensus 487 ~GsL~~~L 494 (495)
+|+|.+++
T Consensus 81 ~~~L~~~i 88 (279)
T cd05633 81 GGDLHYHL 88 (279)
T ss_pred CCCHHHHH
Confidence 99998775
No 375
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.68 E-value=4e-08 Score=93.31 Aligned_cols=82 Identities=26% Similarity=0.371 Sum_probs=70.8
Q ss_pred eccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCCH
Q 040888 413 LGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGSL 490 (495)
Q Consensus 413 iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 490 (495)
||+|+||.||++... +++.+|+|.+....... .....+..|++++++++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999985 58899999987653321 1345789999999999999999999999999999999999999999
Q ss_pred hhhh
Q 040888 491 HEFL 494 (495)
Q Consensus 491 ~~~L 494 (495)
.+++
T Consensus 81 ~~~l 84 (250)
T cd05123 81 FSHL 84 (250)
T ss_pred HHHH
Confidence 8876
No 376
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=98.67 E-value=8.8e-08 Score=91.71 Aligned_cols=84 Identities=18% Similarity=0.278 Sum_probs=65.8
Q ss_pred ceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHH-HhcCCCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQN-ISRIRHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||.||+|... +++.||||.+...... ......+..|... ....+|+|++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999884 5889999998754321 1112334555444 4456999999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 82 ~~L~~~l 88 (260)
T cd05611 82 GDCASLI 88 (260)
T ss_pred CCHHHHH
Confidence 9998876
No 377
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.67 E-value=4.3e-08 Score=97.96 Aligned_cols=89 Identities=18% Similarity=0.352 Sum_probs=71.3
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC-----EE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG-----HN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~-----~~ 478 (495)
+.|...+.||+|+||.||+|.. .++..||||++............+.+|+.++.+++|+||+++++++.... ..
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 4577788999999999999987 46899999998754222223456788999999999999999999886542 47
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++|+||+. ++|.+++
T Consensus 85 ~lv~e~~~-~~L~~~~ 99 (337)
T cd07858 85 YIVYELMD-TDLHQII 99 (337)
T ss_pred EEEEeCCC-CCHHHHH
Confidence 99999996 6787664
No 378
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.66 E-value=5.1e-09 Score=102.30 Aligned_cols=155 Identities=24% Similarity=0.267 Sum_probs=100.8
Q ss_pred CCEeEEEcCCCCCccc--cccccCCCCCCcEEECcCCCCCCCCCCC---CCCCCcEEECcCCcCCC-CcchhccCCCCCc
Q 040888 69 SSVTEIKLSGLGLNGQ--LGYQLTNLKSVSYLDVSNNNLKDSIPYQ---LPPNLKHLDLSENQFSG-TVPYSISQMSELK 142 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~--~~~~~~~l~~L~~L~Ls~N~l~g~~p~~---~~~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~ 142 (495)
..|+.|||+.|-|+.- +-.-...|++|+.|+||.|.|.-..... ..+.|+.|.|+.+.|+. .+-..+..+++|.
T Consensus 146 ~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~ 225 (505)
T KOG3207|consen 146 PNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLE 225 (505)
T ss_pred CcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHH
Confidence 5788888888877643 2344566788888888888776333222 22678888888888873 2333455678888
Q ss_pred EEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcC-cccccCCCCCCEEeccCCcccccc-ccc------CCcc-CcE
Q 040888 143 YLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGEL-PRSFASLSSLKKLYLQNNQFTGSI-NVL------GKLP-LDE 213 (495)
Q Consensus 143 ~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~g~~-~~~------~~~~-L~~ 213 (495)
.|+|..|..-+.-......+..|+.|||++|++-... -...+.++.|..|+++.+.++..- +.. ...+ |+.
T Consensus 226 ~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~ 305 (505)
T KOG3207|consen 226 VLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEY 305 (505)
T ss_pred HhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhccccccee
Confidence 8888888533333333445667888888888876321 134677888888888888776432 111 1222 888
Q ss_pred EEeecCCCcc
Q 040888 214 LNVENNKFSG 223 (495)
Q Consensus 214 l~l~~N~l~g 223 (495)
|+++.|++..
T Consensus 306 L~i~~N~I~~ 315 (505)
T KOG3207|consen 306 LNISENNIRD 315 (505)
T ss_pred eecccCcccc
Confidence 8888888753
No 379
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.66 E-value=8.6e-08 Score=96.46 Aligned_cols=90 Identities=18% Similarity=0.263 Sum_probs=71.9
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC------C
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ------G 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~------~ 476 (495)
.+.|...+.||+|+||.||+|.. .+++.||+|++..........+.+.+|++++.+++|+||+++++++... .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 45688889999999999999987 4689999999865322222345678899999999999999999998644 2
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++|+||++ |+|.+++
T Consensus 95 ~~~lv~e~~~-~~l~~~~ 111 (353)
T cd07850 95 DVYLVMELMD-ANLCQVI 111 (353)
T ss_pred cEEEEEeccC-CCHHHHH
Confidence 4689999996 4777654
No 380
>PRK10345 hypothetical protein; Provisional
Probab=98.66 E-value=1.2e-07 Score=87.66 Aligned_cols=84 Identities=15% Similarity=0.228 Sum_probs=64.8
Q ss_pred CcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-----CCCCcceEEEEEEeCC---EE
Q 040888 407 FATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-----RHTNIAELVGFCSEQG---HN 478 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-----~H~niv~l~g~~~~~~---~~ 478 (495)
+.....||+|+||.||. +++....+||++..... ...+.+.+|++.+.++ .||||++++|++.++. ..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 34568899999999996 54333337998865432 2356799999999999 6799999999998873 43
Q ss_pred E-EEEEe--cCCCCHhhhh
Q 040888 479 I-LIYDY--YRNGSLHEFL 494 (495)
Q Consensus 479 ~-lv~ey--~~~GsL~~~L 494 (495)
+ +|+|| +++|+|.+++
T Consensus 80 ~~~I~e~~G~~~~tL~~~l 98 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFA 98 (210)
T ss_pred EEEEecCCCCcchhHHHHH
Confidence 4 78999 6689998876
No 381
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.65 E-value=3e-08 Score=94.99 Aligned_cols=88 Identities=19% Similarity=0.252 Sum_probs=68.7
Q ss_pred CcccceeccCCceEEEEEEcCC-CCEEEEEEecCcc---cccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSH---FQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~---~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
|...+.||+|+||.||++.... +..+++|.++... .......++.+|+.++++++||||+++++++...+..++||
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 5567889999999999998743 4445555554321 11222446778999999999999999999999888899999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++++|.+++
T Consensus 82 e~~~~~~l~~~~ 93 (260)
T cd08222 82 EYCEGRDLDCKL 93 (260)
T ss_pred EeCCCCCHHHHH
Confidence 999999998765
No 382
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.65 E-value=8.9e-08 Score=92.95 Aligned_cols=87 Identities=23% Similarity=0.414 Sum_probs=68.4
Q ss_pred CcccceeccCCceEEEEEEcCC-CCEEEEEEecCcccccccHHHHHHHHHHHhcC---CCCCcceEEEEEEeCCE-----
Q 040888 407 FATGRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQRANSESFSEIVQNISRI---RHTNIAELVGFCSEQGH----- 477 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l---~H~niv~l~g~~~~~~~----- 477 (495)
|+..+.||+|+||.||+|+.+. ++.+|+|++............+.+|++++.++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 4556889999999999999864 89999999975432222244567787776655 69999999999998776
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.+++|||++ ++|.+++
T Consensus 81 ~~l~~e~~~-~~l~~~l 96 (287)
T cd07838 81 LTLVFEHVD-QDLATYL 96 (287)
T ss_pred eEEEehhcc-cCHHHHH
Confidence 899999997 4787765
No 383
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.65 E-value=9.7e-08 Score=94.14 Aligned_cols=87 Identities=26% Similarity=0.430 Sum_probs=71.0
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
|+..+.||+|+||.||+|... ++..+|+|.+..... .....+++.+|++++++++|+|++++.+++......++|+||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 455678999999999999974 588999999864322 112245788999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+. |++.+++
T Consensus 97 ~~-~~l~~~~ 105 (308)
T cd06634 97 CL-GSASDLL 105 (308)
T ss_pred cC-CCHHHHH
Confidence 96 6776654
No 384
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=98.64 E-value=4.8e-09 Score=113.04 Aligned_cols=97 Identities=23% Similarity=0.292 Sum_probs=82.1
Q ss_pred HHHHHhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeC
Q 040888 398 ADLLTATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQ 475 (495)
Q Consensus 398 ~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~ 475 (495)
.++.-..++|...++||+|+||.|...+++ .++++|+|++.+..+- +.....|..|-++|.--..+-||.|+-.|.++
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 344445678999999999999999999985 5889999999875432 33456789999999999999999999999999
Q ss_pred CEEEEEEEecCCCCHhhhh
Q 040888 476 GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 ~~~~lv~ey~~~GsL~~~L 494 (495)
...|+|||||+||||-..+
T Consensus 148 ~~LYlVMdY~pGGDlltLl 166 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLL 166 (1317)
T ss_pred cceEEEEecccCchHHHHH
Confidence 9999999999999997654
No 385
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.64 E-value=8.5e-08 Score=96.71 Aligned_cols=82 Identities=15% Similarity=0.232 Sum_probs=69.7
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
..+|...+.||+|+||.||+|... ++..||+|..... ....|+.++.+++|+|||++++++...+..++|+
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 457999999999999999999985 4778999975432 2346899999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+. |+|.+++
T Consensus 137 e~~~-~~l~~~l 147 (357)
T PHA03209 137 PHYS-SDLYTYL 147 (357)
T ss_pred EccC-CcHHHHH
Confidence 9995 6888765
No 386
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.63 E-value=3.7e-09 Score=101.98 Aligned_cols=115 Identities=30% Similarity=0.445 Sum_probs=94.9
Q ss_pred CCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccC-CcCCCcCcccccCC
Q 040888 108 SIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSK-NQLTGELPRSFASL 186 (495)
Q Consensus 108 ~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l 186 (495)
.+|..+++..+.++|..|+|+...|..|+.+.+|+.||||+|+|+-.-|++|.++.+|..|-+.+ |+|+......|++|
T Consensus 60 eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL 139 (498)
T KOG4237|consen 60 EVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGL 139 (498)
T ss_pred cCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhH
Confidence 68888888899999999999977778899999999999999999988899999988887765555 88986666688889
Q ss_pred CCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCc
Q 040888 187 SSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFS 222 (495)
Q Consensus 187 ~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~ 222 (495)
.+|+.|.+.-|++.-.. ..+..++ +..|.+-+|.+.
T Consensus 140 ~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q 177 (498)
T KOG4237|consen 140 SSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ 177 (498)
T ss_pred HHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh
Confidence 99999999888887666 5666666 777777777765
No 387
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.63 E-value=7.7e-08 Score=96.10 Aligned_cols=89 Identities=19% Similarity=0.342 Sum_probs=71.4
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC-----E
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG-----H 477 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~-----~ 477 (495)
.++|...+.||+|+||.||+|+. .+|+.||+|++..... ......+.+|+.++.+++|+||+++++++.... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 45788889999999999999987 4689999999864322 123456889999999999999999999876543 4
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++|+||+++ +|.+++
T Consensus 83 ~~lv~e~~~~-~l~~~~ 98 (336)
T cd07849 83 VYIVQELMET-DLYKLI 98 (336)
T ss_pred EEEEehhccc-CHHHHH
Confidence 7899999974 776553
No 388
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.63 E-value=6.9e-08 Score=93.49 Aligned_cols=87 Identities=23% Similarity=0.451 Sum_probs=72.7
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
|...+.||+|++|.||+|... +++.+++|++............+.+|++++++++|+||+++++++..++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 344678999999999999984 6889999998765433233567889999999999999999999999999999999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
++ +|.+++
T Consensus 81 ~~-~l~~~l 88 (283)
T cd05118 81 DT-DLYKLI 88 (283)
T ss_pred CC-CHHHHH
Confidence 75 787664
No 389
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.61 E-value=7.5e-08 Score=94.68 Aligned_cols=90 Identities=24% Similarity=0.411 Sum_probs=70.8
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC------
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG------ 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------ 476 (495)
+++|...+.||+|+||.||+|+.. +++.+|+|++............+.+|++++.+++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 467888899999999999999974 5889999998654332222356788999999999999999999875433
Q ss_pred --EEEEEEEecCCCCHhhhh
Q 040888 477 --HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 --~~~lv~ey~~~GsL~~~L 494 (495)
..++|+||++. ++.+++
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~ 105 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLL 105 (311)
T ss_pred CceEEEEEecCCc-CHHHHH
Confidence 46899999975 565543
No 390
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.61 E-value=6e-08 Score=96.47 Aligned_cols=88 Identities=19% Similarity=0.334 Sum_probs=72.8
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC-----EEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG-----HNI 479 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~ 479 (495)
+|...+.||+|+||.||+|... .+..||+|++..........+.+.+|++++.+++|+||+++.+++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 3666789999999999999985 4899999998764322233567999999999999999999999998775 789
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||++ ++|.+++
T Consensus 81 lv~e~~~-~~l~~~l 94 (330)
T cd07834 81 IVTELME-TDLHKVI 94 (330)
T ss_pred EEecchh-hhHHHHH
Confidence 9999998 4787765
No 391
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.61 E-value=1.1e-07 Score=92.44 Aligned_cols=84 Identities=19% Similarity=0.255 Sum_probs=68.5
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~e 483 (495)
+|.....||+|+||.||++... +++.+|+|.+...... .....+.+|+.++.++. |+||+++++++..++..++++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 3445678999999999999874 5899999998754322 23567899999999996 9999999999999889999999
Q ss_pred ecCCCCHh
Q 040888 484 YYRNGSLH 491 (495)
Q Consensus 484 y~~~GsL~ 491 (495)
|++. ++.
T Consensus 84 ~~~~-~l~ 90 (288)
T cd06616 84 LMDI-SLD 90 (288)
T ss_pred cccC-CHH
Confidence 9864 443
No 392
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=98.60 E-value=2.3e-07 Score=90.02 Aligned_cols=83 Identities=22% Similarity=0.269 Sum_probs=64.1
Q ss_pred eeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHH---HHHhcCCCCCcceEEEEEEeCCEEEEEEEecC
Q 040888 412 LLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIV---QNISRIRHTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 412 ~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~---~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
+||+|+||.||++... +++.||+|.+....... .....+..|. +.++...||+|+++.+++...+..++|+||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999874 58899999987543221 1122344443 34455689999999999999999999999999
Q ss_pred CCCHhhhh
Q 040888 487 NGSLHEFL 494 (495)
Q Consensus 487 ~GsL~~~L 494 (495)
+|+|.+++
T Consensus 81 g~~L~~~l 88 (278)
T cd05606 81 GGDLHYHL 88 (278)
T ss_pred CCcHHHHH
Confidence 99998765
No 393
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=98.60 E-value=2.3e-07 Score=89.47 Aligned_cols=90 Identities=23% Similarity=0.310 Sum_probs=66.7
Q ss_pred HHHHHhccCCccccee--ccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhc-CCCCCcceEEEEEE
Q 040888 398 ADLLTATANFATGRLL--GEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISR-IRHTNIAELVGFCS 473 (495)
Q Consensus 398 ~~~~~~t~~f~~~~~i--G~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~-l~H~niv~l~g~~~ 473 (495)
.++..-.++|...+.+ |+|+||.||++.. .++..+|+|.+....... . |+..... .+|||++++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--~-----e~~~~~~~~~h~~iv~~~~~~~ 79 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--I-----EPMVHQLMKDNPNFIKLYYSVT 79 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--h-----hHHHHHHhhcCCCEEEEEEEEe
Confidence 3444445566666665 9999999999987 458889999986542211 1 1211111 27999999999999
Q ss_pred eCCEEEEEEEecCCCCHhhhh
Q 040888 474 EQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 474 ~~~~~~lv~ey~~~GsL~~~L 494 (495)
..+..++||||+++|+|.+++
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l 100 (267)
T PHA03390 80 TLKGHVLIMDYIKDGDLFDLL 100 (267)
T ss_pred cCCeeEEEEEcCCCCcHHHHH
Confidence 999999999999999999876
No 394
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.59 E-value=1.3e-07 Score=96.55 Aligned_cols=82 Identities=16% Similarity=0.255 Sum_probs=69.4
Q ss_pred cCCcccceeccCCceEEEEEEcC---CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP---DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
..|...+.||+|+||.||+|... .+..||||.+... +.+.+|++++.+++|||||++++++......++|
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 164 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMV 164 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence 46888899999999999999763 3578999988642 2356899999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+. ++|.+++
T Consensus 165 ~e~~~-~~l~~~l 176 (392)
T PHA03207 165 MPKYK-CDLFTYV 176 (392)
T ss_pred ehhcC-CCHHHHH
Confidence 99996 6787765
No 395
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.57 E-value=5.7e-08 Score=97.38 Aligned_cols=90 Identities=16% Similarity=0.279 Sum_probs=73.1
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE-----
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH----- 477 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~----- 477 (495)
.++|.....||+|+||.||+|... ++..||||++..........+.+.+|+.++++++|+|++++.+++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 567888899999999999999985 58899999986532222234567889999999999999999998876654
Q ss_pred -EEEEEEecCCCCHhhhh
Q 040888 478 -NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 -~~lv~ey~~~GsL~~~L 494 (495)
.++|+||+ +++|.+++
T Consensus 94 ~~~lv~e~~-~~~L~~~~ 110 (343)
T cd07851 94 DVYLVTHLM-GADLNNIV 110 (343)
T ss_pred cEEEEEecC-CCCHHHHH
Confidence 89999999 56888765
No 396
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.56 E-value=2e-07 Score=91.27 Aligned_cols=87 Identities=16% Similarity=0.337 Sum_probs=69.5
Q ss_pred cCCcccceeccCCceEEEEEEcCC-CCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|+..+ ++.||||.+...... ....++.+|++.+.+.. |+||++++++|..+...++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 456678999999999999999865 899999999754321 22456777887777775 999999999999999999999
Q ss_pred EecCCCCHhhh
Q 040888 483 DYYRNGSLHEF 493 (495)
Q Consensus 483 ey~~~GsL~~~ 493 (495)
||+++ ++..+
T Consensus 94 e~~~~-~l~~l 103 (296)
T cd06618 94 ELMST-CLDKL 103 (296)
T ss_pred eccCc-CHHHH
Confidence 99864 55543
No 397
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.55 E-value=1.5e-07 Score=94.35 Aligned_cols=87 Identities=24% Similarity=0.293 Sum_probs=70.7
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--------
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ-------- 475 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~-------- 475 (495)
.+|...+.||+|+||.||+|.. .+|..||+|++..... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 4677789999999999999987 4688999999865432 2356788999999999999999999776543
Q ss_pred ------CEEEEEEEecCCCCHhhhh
Q 040888 476 ------GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 ------~~~~lv~ey~~~GsL~~~L 494 (495)
...++|+||++ ++|.+++
T Consensus 83 ~~~~~~~~~~lv~e~~~-~~L~~~~ 106 (342)
T cd07854 83 GSLTELNSVYIVQEYME-TDLANVL 106 (342)
T ss_pred ccccccceEEEEeeccc-ccHHHHH
Confidence 35789999997 5887654
No 398
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=98.54 E-value=2.6e-07 Score=97.60 Aligned_cols=93 Identities=22% Similarity=0.414 Sum_probs=76.2
Q ss_pred HHHhccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEe---
Q 040888 400 LLTATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSE--- 474 (495)
Q Consensus 400 ~~~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~--- 474 (495)
+...++-|.....||.|.+|.||+++. ++++.+|||.+..... ..++...|.+++... .|||++..+|++..
T Consensus 14 lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d---~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~ 90 (953)
T KOG0587|consen 14 LPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED---EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDP 90 (953)
T ss_pred CCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc---ccHHHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence 334456677889999999999999987 5789999999876532 346677888888876 79999999999965
Q ss_pred --CCEEEEEEEecCCCCHhhhhC
Q 040888 475 --QGHNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 475 --~~~~~lv~ey~~~GsL~~~L~ 495 (495)
+++.|||||||.+|+.-+.++
T Consensus 91 ~~~DqLWLVMEfC~gGSVTDLVK 113 (953)
T KOG0587|consen 91 GNGDQLWLVMEFCGGGSVTDLVK 113 (953)
T ss_pred CCCCeEEEEeeccCCccHHHHHh
Confidence 468999999999999988753
No 399
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.53 E-value=1.6e-07 Score=85.63 Aligned_cols=81 Identities=15% Similarity=0.208 Sum_probs=57.4
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEecCccccccc-------HHH-----------------HHHHHHHHhcCCCCCc
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRAN-------SES-----------------FSEIVQNISRIRHTNI 465 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~-------~~~-----------------f~~e~~~l~~l~H~ni 465 (495)
...||+|+||.||+|..++|+.||||+++........ ... ...|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3679999999999999988999999999764321111 112 2349999999988877
Q ss_pred ceEEEEEEeCCEEEEEEEecCCCCHhh
Q 040888 466 AELVGFCSEQGHNILIYDYYRNGSLHE 492 (495)
Q Consensus 466 v~l~g~~~~~~~~~lv~ey~~~GsL~~ 492 (495)
.....+.. ...++||||++++++..
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~ 106 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAA 106 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcc
Confidence 54333322 22389999999877643
No 400
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=98.51 E-value=4.7e-08 Score=90.08 Aligned_cols=90 Identities=24% Similarity=0.400 Sum_probs=75.6
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc------ccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCC
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR------ANSESFSEIVQNISRI-RHTNIAELVGFCSEQG 476 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~------~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~ 476 (495)
+.|...+++|+|..+.|.+|.. ++|...|+|++....... ...+.-.+|+.+|+++ .||+|+.+.+++..+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 4567788999999999999988 468899999986543211 1235567899999997 7999999999999999
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
+.++|+|.|+.|.|+++|
T Consensus 97 F~FlVFdl~prGELFDyL 114 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYL 114 (411)
T ss_pred hhhhhhhhcccchHHHHh
Confidence 999999999999999987
No 401
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.50 E-value=4.9e-08 Score=92.00 Aligned_cols=91 Identities=21% Similarity=0.304 Sum_probs=76.8
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.++|+-.++||+|.||+|..++-+ .++.+|+|.+++.-. .+.....-..|-++|...+||.+..|.-.+...+..++|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 356777899999999999999874 699999999987633 222234467889999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||..+|.|+-+|
T Consensus 247 MeyanGGeLf~HL 259 (516)
T KOG0690|consen 247 MEYANGGELFFHL 259 (516)
T ss_pred EEEccCceEeeeh
Confidence 9999999998765
No 402
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.49 E-value=7.9e-07 Score=81.16 Aligned_cols=81 Identities=32% Similarity=0.557 Sum_probs=70.7
Q ss_pred eccCCceEEEEEEcCC-CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCCHh
Q 040888 413 LGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGSLH 491 (495)
Q Consensus 413 iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~ 491 (495)
||+|.+|.||++...+ +..+++|++....... ..+.+.+|++.+.+++|++++++++++......++++||+++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 6899999999999864 8899999997653211 2467999999999999999999999999999999999999999999
Q ss_pred hhh
Q 040888 492 EFL 494 (495)
Q Consensus 492 ~~L 494 (495)
+++
T Consensus 80 ~~~ 82 (215)
T cd00180 80 DLL 82 (215)
T ss_pred HHH
Confidence 875
No 403
>PTZ00284 protein kinase; Provisional
Probab=98.48 E-value=3e-07 Score=96.25 Aligned_cols=93 Identities=23% Similarity=0.351 Sum_probs=69.9
Q ss_pred HHHHHhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCC------CcceEEE
Q 040888 398 ADLLTATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHT------NIAELVG 470 (495)
Q Consensus 398 ~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~------niv~l~g 470 (495)
+++...+++|...+.||+|+||+||+|... .++.||||+++.... ..+++..|++++.+++|. +++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK---YTRDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh---hHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 444556788999999999999999999874 588999999964321 234556677777766554 5889999
Q ss_pred EEEeC-CEEEEEEEecCCCCHhhhh
Q 040888 471 FCSEQ-GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 471 ~~~~~-~~~~lv~ey~~~GsL~~~L 494 (495)
++... ...++|||++ +++|.+++
T Consensus 199 ~~~~~~~~~~iv~~~~-g~~l~~~l 222 (467)
T PTZ00284 199 YFQNETGHMCIVMPKY-GPCLLDWI 222 (467)
T ss_pred EEEcCCceEEEEEecc-CCCHHHHH
Confidence 88764 4678999988 67887765
No 404
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.46 E-value=2.4e-08 Score=109.20 Aligned_cols=92 Identities=26% Similarity=0.464 Sum_probs=78.2
Q ss_pred hccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.+-+++..+.||.|.||.||.|+. ++|...|||.+..........+...+|+.++..++|||+|+.+|+=...+..++.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 344566788999999999999997 5688999999875433333456788999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
||||++|+|.+.+
T Consensus 1313 MEyC~~GsLa~ll 1325 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLL 1325 (1509)
T ss_pred HHHhccCcHHHHH
Confidence 9999999998875
No 405
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.45 E-value=6e-08 Score=105.57 Aligned_cols=75 Identities=24% Similarity=0.337 Sum_probs=61.3
Q ss_pred HhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE
Q 040888 402 TATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH 477 (495)
Q Consensus 402 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (495)
+-..+|....+||+|+||.|||++-+ ||+.+|||+|.... ....-....+|+++++++.|||+|+.+..+.+...
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTA 551 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence 34567778899999999999999874 89999999998654 23334567889999999999999999988876543
No 406
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.44 E-value=7.8e-07 Score=88.65 Aligned_cols=87 Identities=20% Similarity=0.258 Sum_probs=67.3
Q ss_pred CcccceeccCCceEEEEEEcC-C--CCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeC----CEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-D--GKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQ----GHN 478 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~--g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~----~~~ 478 (495)
|...+.||+|+||.||++... . +..||+|++..........+.+.+|++++.++ +||||+++++++... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 566788999999999999974 3 77999999875322222346788999999999 599999999986543 346
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++++||+. ++|.+++
T Consensus 82 ~~~~e~~~-~~L~~~l 96 (332)
T cd07857 82 YLYEELME-ADLHQII 96 (332)
T ss_pred EEEEeccc-CCHHHHH
Confidence 78889886 6887765
No 407
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.43 E-value=1.1e-07 Score=97.12 Aligned_cols=85 Identities=20% Similarity=0.363 Sum_probs=68.4
Q ss_pred cceeccCCceEEEEEEcC-CCCEEEEEEecCccccc--ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE--EEEEEEe
Q 040888 410 GRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR--ANSESFSEIVQNISRIRHTNIAELVGFCSEQGH--NILIYDY 484 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~--~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~--~~lv~ey 484 (495)
..+||+|+|-+||||... +|..||--.++.....+ ...+.|..|+.+|+.++|||||+++.++.+... .-+|.|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 477999999999999984 48888754443322222 234789999999999999999999999987654 6789999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
|..|+|.+|+
T Consensus 125 ~TSGtLr~Y~ 134 (632)
T KOG0584|consen 125 FTSGTLREYR 134 (632)
T ss_pred ccCCcHHHHH
Confidence 9999999986
No 408
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.41 E-value=3.2e-07 Score=96.73 Aligned_cols=90 Identities=16% Similarity=0.258 Sum_probs=65.3
Q ss_pred ccCCcccceeccCCceEEEEEEcCC--CCEEEEEEe--------------cCc-ccccccHHHHHHHHHHHhcCCCCCcc
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPD--GKVLAVKKI--------------DSS-HFQRANSESFSEIVQNISRIRHTNIA 466 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~--g~~vavK~l--------------~~~-~~~~~~~~~f~~e~~~l~~l~H~niv 466 (495)
.++|...+.||+|+||+||+|..+. +...++|.+ ... .......+.+.+|++++.+++|||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 4679999999999999999987632 222222211 000 00111245688999999999999999
Q ss_pred eEEEEEEeCCEEEEEEEecCCCCHhhhh
Q 040888 467 ELVGFCSEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 467 ~l~g~~~~~~~~~lv~ey~~~GsL~~~L 494 (495)
++++++...+..++|+|++. ++|.+++
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l 253 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFM 253 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHH
Confidence 99999999999999999985 4666553
No 409
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.41 E-value=8.2e-07 Score=82.31 Aligned_cols=83 Identities=14% Similarity=0.298 Sum_probs=66.7
Q ss_pred ceeccCCceEEEEEEcCCCCEEEEEEecCccccc------ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 411 RLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQR------ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+.||+|++|.||+|.. .|..|++|......... .....+.+|++++..++|++++....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5789999999999988 66778899865432211 1124578899999999999998888888777888999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++++|.+++
T Consensus 81 ~~G~~L~~~~ 90 (211)
T PRK14879 81 IEGEPLKDLI 90 (211)
T ss_pred eCCcCHHHHH
Confidence 9999998765
No 410
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.38 E-value=1.3e-06 Score=79.82 Aligned_cols=79 Identities=19% Similarity=0.283 Sum_probs=58.7
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEecCccccccc------------------------HHHHHHHHHHHhcCCCCCc
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRAN------------------------SESFSEIVQNISRIRHTNI 465 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~------------------------~~~f~~e~~~l~~l~H~ni 465 (495)
...||+|+||.||+|...+|+.||||.++........ ...+..|.+.+.+++|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3679999999999999888999999998764211000 1224578999999999998
Q ss_pred ceEEEEEEeCCEEEEEEEecCCCCH
Q 040888 466 AELVGFCSEQGHNILIYDYYRNGSL 490 (495)
Q Consensus 466 v~l~g~~~~~~~~~lv~ey~~~GsL 490 (495)
.....+.... .++||||++++++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~ 104 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGS 104 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCc
Confidence 6555544433 4899999998754
No 411
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.38 E-value=4.4e-08 Score=100.38 Aligned_cols=88 Identities=23% Similarity=0.373 Sum_probs=75.5
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|.....+|.|.||.|||++. ..+...|||.++.... ........|+-++...+|||||.++|.+...+..++.|
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~--dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG--DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCC--ccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 45677789999999999999998 4688999999986532 22455678899999999999999999999999999999
Q ss_pred EecCCCCHhhh
Q 040888 483 DYYRNGSLHEF 493 (495)
Q Consensus 483 ey~~~GsL~~~ 493 (495)
||+.+|+|.+.
T Consensus 92 EycgggslQdi 102 (829)
T KOG0576|consen 92 EYCGGGSLQDI 102 (829)
T ss_pred EecCCCcccce
Confidence 99999999774
No 412
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.38 E-value=1.1e-07 Score=92.93 Aligned_cols=89 Identities=20% Similarity=0.268 Sum_probs=69.3
Q ss_pred CcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccc-----cHHHHHHHHHHHhcCCCCCcceEEEEEEe-CCEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRA-----NSESFSEIVQNISRIRHTNIAELVGFCSE-QGHNI 479 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~-----~~~~f~~e~~~l~~l~H~niv~l~g~~~~-~~~~~ 479 (495)
|-..++||+|+|+.||||.. ...+.||||.-......+. ..+...+|-++-..++||.||++++|+.- .+..+
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC 544 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC 544 (775)
T ss_pred HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence 44567899999999999986 4577899997543321111 12345688899999999999999999965 45678
Q ss_pred EEEEecCCCCHhhhhC
Q 040888 480 LIYDYYRNGSLHEFLH 495 (495)
Q Consensus 480 lv~ey~~~GsL~~~L~ 495 (495)
-|.||+++.||+-||+
T Consensus 545 TVLEYceGNDLDFYLK 560 (775)
T KOG1151|consen 545 TVLEYCEGNDLDFYLK 560 (775)
T ss_pred eeeeecCCCchhHHHH
Confidence 9999999999998874
No 413
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.37 E-value=9.4e-07 Score=93.96 Aligned_cols=91 Identities=13% Similarity=0.259 Sum_probs=68.0
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccc-----cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQ-----RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-----~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
...|...+.||+|+||.||+|.+.+...++.++....... ....+.+.+|++++.+++|++++....++...+..
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 3445667899999999999999865443332222221110 01235688999999999999999988888887788
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+++++|.+++
T Consensus 412 ~lv~E~~~g~~L~~~l 427 (535)
T PRK09605 412 TIVMEYIGGKDLKDVL 427 (535)
T ss_pred EEEEEecCCCcHHHHH
Confidence 9999999999999875
No 414
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.37 E-value=5.9e-08 Score=98.69 Aligned_cols=82 Identities=18% Similarity=0.331 Sum_probs=68.4
Q ss_pred cceeccCCceEEEEEEcCC-CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCC
Q 040888 410 GRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNG 488 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 488 (495)
.-.||.|+||+||+|+.++ +-..|.|++.-.. ....++|+-||++|+..+||+||+|++.|..++..++..|||.||
T Consensus 37 iGELGDGAFGKVyKA~nket~~lAAaKvIetks--eEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GG 114 (1187)
T KOG0579|consen 37 IGELGDGAFGKVYKAVNKETKLLAAAKVIETKS--EEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGG 114 (1187)
T ss_pred HhhhcCccchhhhhhhcccchhhhhhhhhcccc--hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCc
Confidence 4568999999999999865 4455778875432 233678999999999999999999999999999999999999999
Q ss_pred CHhhh
Q 040888 489 SLHEF 493 (495)
Q Consensus 489 sL~~~ 493 (495)
-.+..
T Consensus 115 AVDai 119 (1187)
T KOG0579|consen 115 AVDAI 119 (1187)
T ss_pred hHhHH
Confidence 87653
No 415
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.36 E-value=1.1e-06 Score=80.62 Aligned_cols=82 Identities=15% Similarity=0.314 Sum_probs=63.7
Q ss_pred eeccCCceEEEEEEcCCCCEEEEEEecCccccc------ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEec
Q 040888 412 LLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQR------ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 412 ~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
.||+|+||.||+|.+ +|..|++|......... ...+.+.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999996 56788999865432111 11356788999999999998776666777777779999999
Q ss_pred CCCCHhhhh
Q 040888 486 RNGSLHEFL 494 (495)
Q Consensus 486 ~~GsL~~~L 494 (495)
++++|.+++
T Consensus 80 ~g~~l~~~~ 88 (199)
T TIGR03724 80 EGKPLKDVI 88 (199)
T ss_pred CCccHHHHH
Confidence 999998764
No 416
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.36 E-value=1.3e-07 Score=86.11 Aligned_cols=88 Identities=27% Similarity=0.370 Sum_probs=74.7
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC-----CEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ-----GHN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~-----~~~ 478 (495)
+.|...+.+|+|||..||.++. .++..+|+|++..... ...+..++|++.-++++|||++++++++..+ .+.
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~--~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ--EDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccch--HHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 3567789999999999999984 6788999999976542 3467789999999999999999999998654 358
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
|+++.|...|+|.+.+
T Consensus 99 yll~Pyy~~Gsl~d~i 114 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEI 114 (302)
T ss_pred EEEeehhccccHHHHH
Confidence 9999999999998875
No 417
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.35 E-value=1.2e-06 Score=82.29 Aligned_cols=77 Identities=25% Similarity=0.518 Sum_probs=66.9
Q ss_pred CceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCCHhhhh
Q 040888 417 TIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 417 ~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~~~L 494 (495)
+||.||+|+.. ++..+|+|++........ .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 58999999986 489999999976543211 578999999999999999999999999999999999999999998875
No 418
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.35 E-value=8e-07 Score=59.61 Aligned_cols=39 Identities=44% Similarity=0.952 Sum_probs=29.0
Q ss_pred hHHHHHHHHHHHcCCC-C-CCCCCCCCCC-CCCCCCCcccEEec
Q 040888 27 SQDASALNVMYTSLHS-P-SQLSNWKAGG-GDPCGEHWKGITCS 67 (495)
Q Consensus 27 ~~~~~~L~~~~~~~~~-~-~~l~~w~~~~-~~~C~~~w~gv~c~ 67 (495)
++|++||++||+++.. + ..+.+|.... .+|| +|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C--~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPC--SWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CC--CSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCe--eeccEEeC
Confidence 5789999999999984 4 4789999753 7899 89999995
No 419
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.33 E-value=1.6e-06 Score=80.55 Aligned_cols=89 Identities=16% Similarity=0.188 Sum_probs=70.2
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccc-cHHH------HHHHHHHHhcCCCCCcceEEEEEEeC-
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRA-NSES------FSEIVQNISRIRHTNIAELVGFCSEQ- 475 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~-~~~~------f~~e~~~l~~l~H~niv~l~g~~~~~- 475 (495)
.++|...+++|+|+||.||.... ++..+|+|.++....... ..+. |.+|++.+.++.|++|..+..++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 46788999999999999999655 577899999975532211 1112 68999999999999999999886643
Q ss_pred -------CEEEEEEEecCCCCHhhh
Q 040888 476 -------GHNILIYDYYRNGSLHEF 493 (495)
Q Consensus 476 -------~~~~lv~ey~~~GsL~~~ 493 (495)
...++||||+++.+|.++
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~ 133 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDM 133 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHh
Confidence 247899999999999775
No 420
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.31 E-value=9.9e-08 Score=93.44 Aligned_cols=155 Identities=21% Similarity=0.165 Sum_probs=107.7
Q ss_pred CCCEeEEEcCCCCCccccccc-cCCCCCCcEEECcCCCCCCCCCCCC---CCCCcEEECcCCcCCCCcchhccCCCCCcE
Q 040888 68 GSSVTEIKLSGLGLNGQLGYQ-LTNLKSVSYLDVSNNNLKDSIPYQL---PPNLKHLDLSENQFSGTVPYSISQMSELKY 143 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~---~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 143 (495)
.++++.|+|+.|.|.-..... -..+++|+.|.|+.+.|+-.--..+ .|+|+.|+|..|..-+.-......+..|+.
T Consensus 171 Lp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~ 250 (505)
T KOG3207|consen 171 LPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQE 250 (505)
T ss_pred cccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhh
Confidence 368999999999988655432 2367889999999999984221111 289999999999644444445566788999
Q ss_pred EEcccCcCCCcc-chhhhCCCCCcEEEccCCcCCCc-Cccc-----ccCCCCCCEEeccCCcccccc--cccCCcc-CcE
Q 040888 144 LNLGSNQLNGQL-SDMFQKNEKLETLDLSKNQLTGE-LPRS-----FASLSSLKKLYLQNNQFTGSI--NVLGKLP-LDE 213 (495)
Q Consensus 144 L~L~~N~l~g~~-p~~~~~l~~L~~L~ls~N~l~g~-~p~~-----~~~l~~L~~L~l~~N~l~g~~--~~~~~~~-L~~ 213 (495)
|+|++|++-... -...+.++.|..|+++.+.++.. +|+. ...+++|++|++..|++.... ..+..++ |+.
T Consensus 251 LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~ 330 (505)
T KOG3207|consen 251 LDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKH 330 (505)
T ss_pred ccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhh
Confidence 999999975322 23467788899999999988753 3333 456889999999999985322 3333333 555
Q ss_pred EEeecCCCc
Q 040888 214 LNVENNKFS 222 (495)
Q Consensus 214 l~l~~N~l~ 222 (495)
|.+..|.|+
T Consensus 331 l~~~~n~ln 339 (505)
T KOG3207|consen 331 LRITLNYLN 339 (505)
T ss_pred hhccccccc
Confidence 555555554
No 421
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.30 E-value=2.6e-08 Score=82.61 Aligned_cols=107 Identities=28% Similarity=0.393 Sum_probs=59.2
Q ss_pred EeEEEcCCCCCc--cccccccCCCCCCcEEECcCCCCCCCCCCCCC---CCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 71 VTEIKLSGLGLN--GQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP---PNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 71 v~~l~L~~n~l~--g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~---~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
+..++|+++.|- -..+..+.....|+..+|++|.|. .+|..+. +.++.|+|++|.|+ .+|.++..++.|+.|+
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 334555555543 112234445555666666666665 3443332 45666666666666 5666666666666666
Q ss_pred cccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcc
Q 040888 146 LGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPR 181 (495)
Q Consensus 146 L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 181 (495)
++.|.|. ..|..+..+.+|..|+..+|.+. .+|.
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~ 140 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDV 140 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcH
Confidence 6666665 33444444666666666666654 3443
No 422
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.29 E-value=2e-08 Score=83.27 Aligned_cols=103 Identities=26% Similarity=0.374 Sum_probs=70.2
Q ss_pred CcEEECcCCCCCCCCCCCC---C--CCCcEEECcCCcCCCCcchhc-cCCCCCcEEEcccCcCCCccchhhhCCCCCcEE
Q 040888 95 VSYLDVSNNNLKDSIPYQL---P--PNLKHLDLSENQFSGTVPYSI-SQMSELKYLNLGSNQLNGQLSDMFQKNEKLETL 168 (495)
Q Consensus 95 L~~L~Ls~N~l~g~~p~~~---~--~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 168 (495)
+..+||+++.+. .++... . ..|+..+|++|.|.. +|+.| ...+.++.|+|++|.|+ .+|..+..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 556777777664 222221 1 567777888888874 44444 44557788888888887 567778888888888
Q ss_pred EccCCcCCCcCcccccCCCCCCEEeccCCcccc
Q 040888 169 DLSKNQLTGELPRSFASLSSLKKLYLQNNQFTG 201 (495)
Q Consensus 169 ~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 201 (495)
+++.|.|. ..|.-+..|.+|-.|+..+|.+..
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~e 137 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARAE 137 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCcccc
Confidence 88888887 556666667777777777776643
No 423
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.27 E-value=7.8e-07 Score=89.66 Aligned_cols=89 Identities=15% Similarity=0.309 Sum_probs=75.9
Q ss_pred CCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
.|+..+.||+||.++||++...+.+.+|+|++............|..|+++|.++ .|.+||+|++|-..++..|+||||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~ 441 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMEC 441 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeec
Confidence 4667789999999999999998888999998866544444467899999999999 599999999999999999999998
Q ss_pred cCCCCHhhhhC
Q 040888 485 YRNGSLHEFLH 495 (495)
Q Consensus 485 ~~~GsL~~~L~ 495 (495)
=+ .||..+|+
T Consensus 442 Gd-~DL~kiL~ 451 (677)
T KOG0596|consen 442 GD-IDLNKILK 451 (677)
T ss_pred cc-ccHHHHHH
Confidence 64 48877763
No 424
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=98.27 E-value=2.1e-06 Score=81.07 Aligned_cols=72 Identities=17% Similarity=0.196 Sum_probs=59.9
Q ss_pred CCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCCHhhhh
Q 040888 416 GTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 416 G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~~~L 494 (495)
|.||.||++.. .+++.+|+|++.... .+.+|...+....||||+++++++...+..++|+||+++|+|.+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence 88999999998 468899999986532 2334555556667999999999999999999999999999998875
No 425
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.27 E-value=9.9e-08 Score=98.71 Aligned_cols=121 Identities=31% Similarity=0.364 Sum_probs=73.3
Q ss_pred CcEEECcCCCCCCCCCCC--CCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchh-hhCCCCCcEEEcc
Q 040888 95 VSYLDVSNNNLKDSIPYQ--LPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDM-FQKNEKLETLDLS 171 (495)
Q Consensus 95 L~~L~Ls~N~l~g~~p~~--~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~L~ls 171 (495)
|.+.+.++|.|.- .... +.+.|++|||++|+|+.. +.+..|++|+.|||+.|.|. .+|.. ...+ .|+.|.|.
T Consensus 166 L~~a~fsyN~L~~-mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLVL-MDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLR 240 (1096)
T ss_pred HhhhhcchhhHHh-HHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhh-hheeeeec
Confidence 4445555555541 1111 225677777777777633 26677777777777777776 33332 1222 37777777
Q ss_pred CCcCCCcCcccccCCCCCCEEeccCCcccccc--cccCCcc-CcEEEeecCCCc
Q 040888 172 KNQLTGELPRSFASLSSLKKLYLQNNQFTGSI--NVLGKLP-LDELNVENNKFS 222 (495)
Q Consensus 172 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~--~~~~~~~-L~~l~l~~N~l~ 222 (495)
+|.++.. ..+.+|.+|+.|||++|-|.+.- ..+..+. |..|+|.+|++.
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 7777632 23567777777788888777644 3344444 777777777765
No 426
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.26 E-value=9.2e-07 Score=89.52 Aligned_cols=90 Identities=21% Similarity=0.296 Sum_probs=71.4
Q ss_pred cCCcccceeccCCceEEEEEEcCC-CCEEEEEEecCccccc------ccHHHHHHHHHHHhcCC---CCCcceEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQR------ANSESFSEIVQNISRIR---HTNIAELVGFCSE 474 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~------~~~~~f~~e~~~l~~l~---H~niv~l~g~~~~ 474 (495)
.+|...+.+|+|+||.|+.|.++. ...|+||.+.+.+.-. ...-..-.|+++|++++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 457778999999999999999954 6689999998754310 01112457999999998 9999999999999
Q ss_pred CCEEEEEEEe-cCCCCHhhhh
Q 040888 475 QGHNILIYDY-YRNGSLHEFL 494 (495)
Q Consensus 475 ~~~~~lv~ey-~~~GsL~~~L 494 (495)
+++.++++|- -++-||++++
T Consensus 641 dd~yyl~te~hg~gIDLFd~I 661 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFI 661 (772)
T ss_pred CCeeEEEecCCCCCcchhhhh
Confidence 9999999985 4455788776
No 427
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=98.25 E-value=1.4e-06 Score=89.69 Aligned_cols=86 Identities=20% Similarity=0.374 Sum_probs=72.2
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-C-----CCcceEEEEEEeCCEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-H-----TNIAELVGFCSEQGHN 478 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H-----~niv~l~g~~~~~~~~ 478 (495)
.|...+.||+|.||.|-||.. .+++.||||.++.... ..++-..|+.+|..++ | -|+|++++|+...+..
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~---f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR---FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH---HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 567789999999999999987 5699999999986532 2455677899998886 3 5899999999999999
Q ss_pred EEEEEecCCCCHhhhhC
Q 040888 479 ILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L~ 495 (495)
+||+|.+.. +|.++|+
T Consensus 264 ciVfELL~~-NLYellK 279 (586)
T KOG0667|consen 264 CIVFELLST-NLYELLK 279 (586)
T ss_pred eeeehhhhh-hHHHHHH
Confidence 999999865 8988874
No 428
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=98.23 E-value=2.6e-06 Score=82.56 Aligned_cols=97 Identities=22% Similarity=0.361 Sum_probs=75.2
Q ss_pred HHHHHhccCCcccceeccCCceEEEEEEcCC------CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEE
Q 040888 398 ADLLTATANFATGRLLGEGTIGRVYRAKYPD------GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGF 471 (495)
Q Consensus 398 ~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~ 471 (495)
.++......+....++-+|.||+||+|.+++ .+.|-||.++.... .-....|..|..++..+.|||+.++.+.
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS-~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHAS-QIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhccc-HHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 4555555667888889999999999997743 34566777754432 1224568899999999999999999999
Q ss_pred EEeC-CEEEEEEEecCCCCHhhhhC
Q 040888 472 CSEQ-GHNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 472 ~~~~-~~~~lv~ey~~~GsL~~~L~ 495 (495)
|.++ +..+++|.++.-|+|..||+
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~ 380 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQ 380 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHH
Confidence 9775 46789999999999999873
No 429
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=98.21 E-value=5.4e-07 Score=88.72 Aligned_cols=91 Identities=22% Similarity=0.312 Sum_probs=76.6
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.+.|..-++||+|+||.||-|+.+ +|+.+|.|++.+.... +....--..|-.+|.++..+.||.+--.|.+.+..++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 356788899999999999999874 6999999999765332 22344567888999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
+..|.+|||.-||
T Consensus 264 LtlMNGGDLkfHi 276 (591)
T KOG0986|consen 264 LTLMNGGDLKFHI 276 (591)
T ss_pred EEeecCCceeEEe
Confidence 9999999998775
No 430
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.19 E-value=3.2e-07 Score=84.43 Aligned_cols=82 Identities=22% Similarity=0.334 Sum_probs=66.9
Q ss_pred ccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHH-hcCCCCCcceEEEEEEeCCEEEEEEEecC
Q 040888 409 TGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNI-SRIRHTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 409 ~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l-~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
....||.|.||+|+|-.+ +.|+..|||+++..... ...+++..|.++. +.-..||||+++|.+..++..|+-||.|.
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~-keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIE-KEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccch-HHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 346799999999999988 56999999999876442 3356788888765 45589999999999999999999999996
Q ss_pred CCCHhh
Q 040888 487 NGSLHE 492 (495)
Q Consensus 487 ~GsL~~ 492 (495)
- ||+.
T Consensus 147 ~-SlDk 151 (361)
T KOG1006|consen 147 I-SLDK 151 (361)
T ss_pred h-hHHH
Confidence 3 5544
No 431
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.18 E-value=2.6e-08 Score=102.83 Aligned_cols=107 Identities=36% Similarity=0.408 Sum_probs=44.3
Q ss_pred cCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcch-hccCCCCCcEEEcccCcCCCccchhhhCCCCCcE
Q 040888 89 LTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPY-SISQMSELKYLNLGSNQLNGQLSDMFQKNEKLET 167 (495)
Q Consensus 89 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~ 167 (495)
+.-++.|+.|||+.|+++..---.-.+.|++|||+.|.+. .+|. ....+ +|..|+|++|.++... .+.++.+|+.
T Consensus 183 Lqll~ale~LnLshNk~~~v~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lrnN~l~tL~--gie~LksL~~ 258 (1096)
T KOG1859|consen 183 LQLLPALESLNLSHNKFTKVDNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLRNNALTTLR--GIENLKSLYG 258 (1096)
T ss_pred HHHHHHhhhhccchhhhhhhHHHHhcccccccccccchhc-cccccchhhh-hheeeeecccHHHhhh--hHHhhhhhhc
Confidence 3334445555555555543210001145555555555554 2222 11122 2555555555544221 1334445555
Q ss_pred EEccCCcCCCcCc-ccccCCCCCCEEeccCCcc
Q 040888 168 LDLSKNQLTGELP-RSFASLSSLKKLYLQNNQF 199 (495)
Q Consensus 168 L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l 199 (495)
|||++|-|++--- ..+..|..|+.|+|.+|.+
T Consensus 259 LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 259 LDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred cchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 5555555443210 1123344455555555544
No 432
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.17 E-value=1.3e-06 Score=89.25 Aligned_cols=90 Identities=14% Similarity=0.251 Sum_probs=74.0
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.-|...+.||-|+||+|..+.- ++...+|.|.|++... .+.......+|-++|.+.+.+-+|+|+-.|.+++..|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 3477788899999999998865 4567889999976532 1122345678899999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++||+..+|
T Consensus 709 dYIPGGDmMSLL 720 (1034)
T KOG0608|consen 709 DYIPGGDMMSLL 720 (1034)
T ss_pred eccCCccHHHHH
Confidence 999999998765
No 433
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.16 E-value=5.4e-06 Score=76.12 Aligned_cols=83 Identities=16% Similarity=0.203 Sum_probs=60.9
Q ss_pred CcccceeccCCceEEEEEEcCCCCEEEEEEecCccccc--------------------ccHHHHHHHHHHHhcCCCCC--
Q 040888 407 FATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQR--------------------ANSESFSEIVQNISRIRHTN-- 464 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~--------------------~~~~~f~~e~~~l~~l~H~n-- 464 (495)
|...+.||+|+||.||++..++|+.||||+++...... .....+..|...+.++.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 56678999999999999999889999999876432100 00123677888999998874
Q ss_pred cceEEEEEEeCCEEEEEEEecCCCCHhhh
Q 040888 465 IAELVGFCSEQGHNILIYDYYRNGSLHEF 493 (495)
Q Consensus 465 iv~l~g~~~~~~~~~lv~ey~~~GsL~~~ 493 (495)
+.+.++ ....++||||+++++|.+.
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~ 121 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRV 121 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhc
Confidence 444443 2345899999999988654
No 434
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.16 E-value=3.3e-07 Score=94.18 Aligned_cols=125 Identities=29% Similarity=0.321 Sum_probs=68.4
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCC-CCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIP-YQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+..++|..|.+.- +-..+..+++|..|+|..|.+..... ....++|++|+|++|.|+...+ +..++.|+.|++++
T Consensus 73 ~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~ 149 (414)
T KOG0531|consen 73 SLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSG 149 (414)
T ss_pred hHHhhccchhhhhh-hhcccccccceeeeeccccchhhcccchhhhhcchheeccccccccccc--hhhccchhhheecc
Confidence 34444455555543 22235556666666666666664443 2333666666666666664332 44455566666666
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCc-ccccCCCCCCEEeccCCccc
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELP-RSFASLSSLKKLYLQNNQFT 200 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~ 200 (495)
|.|+.. ..+..+..|+.+++++|.++..-+ . ...+.+|+.+++.+|.+.
T Consensus 150 N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 150 NLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR 199 (414)
T ss_pred Ccchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh
Confidence 666532 223345666666666666663322 1 355566666666666554
No 435
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.16 E-value=7.7e-07 Score=85.06 Aligned_cols=154 Identities=27% Similarity=0.395 Sum_probs=91.2
Q ss_pred CCEeEEEcCCCCCcc----ccccccCCCCCCcEEECcCCCCCCC----CCCCC--------C-CCCcEEECcCCcCCCCc
Q 040888 69 SSVTEIKLSGLGLNG----QLGYQLTNLKSVSYLDVSNNNLKDS----IPYQL--------P-PNLKHLDLSENQFSGTV 131 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g----~~~~~~~~l~~L~~L~Ls~N~l~g~----~p~~~--------~-~~L~~L~Ls~N~l~g~~ 131 (495)
..++.|+|++|.+.- .+...+.+.++|+..++|. -++|. +|..+ . +.|++||||.|.|.-.-
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd-~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD-MFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh-hhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 468888888888763 3455666777777777774 33443 33221 1 47888888888776433
Q ss_pred ch----hccCCCCCcEEEcccCcCCCcc-------------chhhhCCCCCcEEEccCCcCCCc----CcccccCCCCCC
Q 040888 132 PY----SISQMSELKYLNLGSNQLNGQL-------------SDMFQKNEKLETLDLSKNQLTGE----LPRSFASLSSLK 190 (495)
Q Consensus 132 p~----~~~~l~~L~~L~L~~N~l~g~~-------------p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~ 190 (495)
+. -+.++..|+.|.|.+|.+.-.- ..-.+.-+.|+++..++|++... +...|...+.|+
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~le 188 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLE 188 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccc
Confidence 33 3456777777888777775111 11123345677777777777532 223344556677
Q ss_pred EEeccCCccc--ccc---cccCCcc-CcEEEeecCCCcc
Q 040888 191 KLYLQNNQFT--GSI---NVLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 191 ~L~l~~N~l~--g~~---~~~~~~~-L~~l~l~~N~l~g 223 (495)
.+.+..|.+. |.. ..+...+ |+.|||.+|.|+-
T Consensus 189 evr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~ 227 (382)
T KOG1909|consen 189 EVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTL 227 (382)
T ss_pred eEEEecccccCchhHHHHHHHHhCCcceeeecccchhhh
Confidence 7777777654 221 2233334 6777777776663
No 436
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.15 E-value=7.1e-07 Score=85.29 Aligned_cols=154 Identities=21% Similarity=0.317 Sum_probs=102.9
Q ss_pred CCEeEEEcCCCCCcccccc----ccCCCCCCcEEECcCCCCCC----CCC---------CCC--CCCCcEEECcCCcCCC
Q 040888 69 SSVTEIKLSGLGLNGQLGY----QLTNLKSVSYLDVSNNNLKD----SIP---------YQL--PPNLKHLDLSENQFSG 129 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~----~~~~l~~L~~L~Ls~N~l~g----~~p---------~~~--~~~L~~L~Ls~N~l~g 129 (495)
++++.|+|++|.|.-.-++ -+..++.|++|.|.+|.+.- .+. ... .+.|++++..+|++..
T Consensus 92 ~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen 171 (382)
T KOG1909|consen 92 PKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLEN 171 (382)
T ss_pred CceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecccccc
Confidence 4788888888888754433 35567888888888887751 110 111 2678888888888863
Q ss_pred C----cchhccCCCCCcEEEcccCcCCC----ccchhhhCCCCCcEEEccCCcCCCc----CcccccCCCCCCEEeccCC
Q 040888 130 T----VPYSISQMSELKYLNLGSNQLNG----QLSDMFQKNEKLETLDLSKNQLTGE----LPRSFASLSSLKKLYLQNN 197 (495)
Q Consensus 130 ~----~p~~~~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N 197 (495)
. +...|...+.|+.+.++.|.|.- .+...|..+++|+.|||..|.|+-. +...+..+++|+.|+++++
T Consensus 172 ~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dc 251 (382)
T KOG1909|consen 172 GGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDC 251 (382)
T ss_pred ccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccc
Confidence 2 23345667788888888888742 1335677888888888888888732 3445666778888888888
Q ss_pred ccc--ccc---cccCC-c-cCcEEEeecCCCc
Q 040888 198 QFT--GSI---NVLGK-L-PLDELNVENNKFS 222 (495)
Q Consensus 198 ~l~--g~~---~~~~~-~-~L~~l~l~~N~l~ 222 (495)
.+. |.+ ..+.. . .|+.+.+.+|.++
T Consensus 252 ll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 252 LLENEGAIAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred ccccccHHHHHHHHhccCCCCceeccCcchhH
Confidence 876 322 22222 2 3788888888776
No 437
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.14 E-value=2.6e-07 Score=95.00 Aligned_cols=126 Identities=25% Similarity=0.285 Sum_probs=61.5
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
..++.|+|.+|.+..... .+..+++|++|||++|.|+...+..-.+.|+.|++++|.++.. ..+..+..|+.+++++
T Consensus 95 ~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~ 171 (414)
T KOG0531|consen 95 KSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLEGLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSY 171 (414)
T ss_pred cceeeeeccccchhhccc-chhhhhcchheeccccccccccchhhccchhhheeccCcchhc--cCCccchhhhcccCCc
Confidence 345555555555554322 1444555556666666555444433334455556666655521 2233355555556666
Q ss_pred CcCCCccc-hhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCccc
Q 040888 149 NQLNGQLS-DMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFT 200 (495)
Q Consensus 149 N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 200 (495)
|.+...-+ . ...+.+|+.+++.+|.+.- ...+..+..+..+++..|.++
T Consensus 172 n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 172 NRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred chhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccce
Confidence 55553333 1 3444555555555555541 122333334444455555554
No 438
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.09 E-value=6.7e-07 Score=86.98 Aligned_cols=90 Identities=17% Similarity=0.258 Sum_probs=71.1
Q ss_pred CCcccceeccCCceEEEEEEcCC-CCEEEEEEecCccc-ccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHF-QRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (495)
+|....+||+|+||+|..|..+. ...+|||+++++-. +....+--+.|-++|+-- +-|.+|+++.++..-+..|+||
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVM 429 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVM 429 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEE
Confidence 67778999999999999998864 66899999987643 222223334555666544 7899999999999999999999
Q ss_pred EecCCCCHhhhhC
Q 040888 483 DYYRNGSLHEFLH 495 (495)
Q Consensus 483 ey~~~GsL~~~L~ 495 (495)
||+.+|+|.-+++
T Consensus 430 EyvnGGDLMyhiQ 442 (683)
T KOG0696|consen 430 EYVNGGDLMYHIQ 442 (683)
T ss_pred EEecCchhhhHHH
Confidence 9999999987653
No 439
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.08 E-value=4.8e-08 Score=89.08 Aligned_cols=87 Identities=22% Similarity=0.453 Sum_probs=67.1
Q ss_pred CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--------CE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--------GH 477 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--------~~ 477 (495)
|....+||+|.||.||+|+.. .|+.||+|+.-.+....+....-.+|+++|..++|+|++.++..|... ..
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 444578999999999999884 588899988654333223345568999999999999999999999653 24
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||++++. ||+..|
T Consensus 99 ~ylVf~~ceh-DLaGlL 114 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLL 114 (376)
T ss_pred eeeeHHHhhh-hHHHHh
Confidence 7899999986 666543
No 440
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.06 E-value=5e-06 Score=55.91 Aligned_cols=36 Identities=42% Similarity=0.687 Sum_probs=22.1
Q ss_pred CCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCC
Q 040888 116 NLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLN 152 (495)
Q Consensus 116 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 152 (495)
+|++|+|++|+|+ .+|+.+++|++|+.|++++|+|+
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 5666666666666 45556666666666666666665
No 441
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.02 E-value=1.2e-06 Score=79.04 Aligned_cols=84 Identities=15% Similarity=0.363 Sum_probs=70.2
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCC--EEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSEQG--HNI 479 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~--~~~ 479 (495)
.++|+..+.+|+|.++.|+.|.. .+...++||.++.-. .+...+|+++|..++ ||||++|++...+.. ...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk-----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK-----KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH-----HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 45677789999999999999985 567889999997643 467899999999997 999999999998754 457
Q ss_pred EEEEecCCCCHhh
Q 040888 480 LIYDYYRNGSLHE 492 (495)
Q Consensus 480 lv~ey~~~GsL~~ 492 (495)
||+||+.|-+..+
T Consensus 112 LiFE~v~n~Dfk~ 124 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQ 124 (338)
T ss_pred hHhhhhccccHHH
Confidence 9999999877654
No 442
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=97.99 E-value=8.6e-07 Score=81.80 Aligned_cols=85 Identities=25% Similarity=0.428 Sum_probs=70.6
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCC
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGS 489 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 489 (495)
..+|.+...|..|+|++. |..+++|.+..........++|..|.-.++-..||||.+++|.|.......+|..|||.|+
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 456888999999999995 4445667775443333346789999999999999999999999999999999999999999
Q ss_pred HhhhhC
Q 040888 490 LHEFLH 495 (495)
Q Consensus 490 L~~~L~ 495 (495)
|+..||
T Consensus 274 lynvlh 279 (448)
T KOG0195|consen 274 LYNVLH 279 (448)
T ss_pred HHHHHh
Confidence 999887
No 443
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=97.99 E-value=8.7e-06 Score=86.82 Aligned_cols=86 Identities=22% Similarity=0.353 Sum_probs=57.2
Q ss_pred hccCCcccceeccCCceEEEEEEcC-C----CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEE------
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP-D----GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGF------ 471 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~----g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~------ 471 (495)
..++|...+.||+|+||.||+|++. + +..||||++..... .+.+..| .+....+.+++.+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 4678999999999999999999984 4 68999999864321 1222222 1222223333222111
Q ss_pred EEeCCEEEEEEEecCCCCHhhhh
Q 040888 472 CSEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 472 ~~~~~~~~lv~ey~~~GsL~~~L 494 (495)
+..++..++||||+++|+|.+++
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l 226 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLM 226 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHH
Confidence 24556789999999999998876
No 444
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=97.96 E-value=1.9e-06 Score=80.69 Aligned_cols=85 Identities=16% Similarity=0.251 Sum_probs=67.2
Q ss_pred hccCCcc-cceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEe----C
Q 040888 403 ATANFAT-GRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSE----Q 475 (495)
Q Consensus 403 ~t~~f~~-~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~----~ 475 (495)
.|++|.. .++||-|-.|+|..|..+ +++.+|+|++... ..-.+||++--+. .|||||.++++|.. .
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 3566654 467999999999999984 5889999998643 3446788875554 79999999999865 3
Q ss_pred CEEEEEEEecCCCCHhhhh
Q 040888 476 GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 ~~~~lv~ey~~~GsL~~~L 494 (495)
...++|||+|+||+|+..+
T Consensus 132 kcLLiVmE~meGGeLfsri 150 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRI 150 (400)
T ss_pred eeeEeeeecccchHHHHHH
Confidence 4677999999999998765
No 445
>smart00090 RIO RIO-like kinase.
Probab=97.91 E-value=2.6e-05 Score=73.64 Aligned_cols=84 Identities=19% Similarity=0.247 Sum_probs=59.2
Q ss_pred CCcccceeccCCceEEEEEE--cCCCCEEEEEEecCcccccc----------------------cHHHHHHHHHHHhcCC
Q 040888 406 NFATGRLLGEGTIGRVYRAK--YPDGKVLAVKKIDSSHFQRA----------------------NSESFSEIVQNISRIR 461 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~--~~~g~~vavK~l~~~~~~~~----------------------~~~~f~~e~~~l~~l~ 461 (495)
.|...+.||+|+||.||+|. ..+|+.||+|.++....... ....+..|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35667899999999999998 56899999999875421100 0123568999999997
Q ss_pred CCC--cceEEEEEEeCCEEEEEEEecCCCCHhhh
Q 040888 462 HTN--IAELVGFCSEQGHNILIYDYYRNGSLHEF 493 (495)
Q Consensus 462 H~n--iv~l~g~~~~~~~~~lv~ey~~~GsL~~~ 493 (495)
|.. +.+++++ ...++||||+++++|..+
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~ 138 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAP 138 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccc
Confidence 643 3333432 235899999999887543
No 446
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.91 E-value=1.1e-05 Score=54.26 Aligned_cols=36 Identities=36% Similarity=0.545 Sum_probs=16.1
Q ss_pred CCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCC
Q 040888 140 ELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLT 176 (495)
Q Consensus 140 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 176 (495)
+|++|+|++|+|+ .+|..+.++++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 3445555555554 23334444444444444444444
No 447
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.90 E-value=5.3e-06 Score=78.74 Aligned_cols=92 Identities=12% Similarity=0.240 Sum_probs=72.4
Q ss_pred hccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccc-cHHHHHHHHHHHhc-CCCCCcceEEEEEEeCCEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRA-NSESFSEIVQNISR-IRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~-~~~~f~~e~~~l~~-l~H~niv~l~g~~~~~~~~~ 479 (495)
..++|+...+||+|+|.+|..+.+ ++.+.+|+|++++.-.... ...-.+.|-.+... -.||.+|.|+.++..+...+
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 356889999999999999999998 4578999999987533222 23334555555544 47999999999999999999
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+|.||+++|+|.-++
T Consensus 328 fvieyv~ggdlmfhm 342 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHM 342 (593)
T ss_pred EEEEEecCcceeeeh
Confidence 999999999996543
No 448
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=97.81 E-value=4.6e-05 Score=65.75 Aligned_cols=77 Identities=17% Similarity=0.206 Sum_probs=63.9
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCC--CCcceEEEEEEeCCEEEEEEEecCC
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRH--TNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
.+.||+|.++.||++...+ ..+++|....... ...+.+|+..+..++| ..+++++++...++..++++||+++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g 77 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG 77 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence 4679999999999999855 7889998865321 4578899999999977 5889999888877889999999998
Q ss_pred CCHh
Q 040888 488 GSLH 491 (495)
Q Consensus 488 GsL~ 491 (495)
+.+.
T Consensus 78 ~~~~ 81 (155)
T cd05120 78 ETLD 81 (155)
T ss_pred eecc
Confidence 8764
No 449
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=97.80 E-value=1.7e-05 Score=77.73 Aligned_cols=90 Identities=17% Similarity=0.328 Sum_probs=75.0
Q ss_pred HHHhccCCcccceeccCCceEEEEEEcC----CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEe
Q 040888 400 LLTATANFATGRLLGEGTIGRVYRAKYP----DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSE 474 (495)
Q Consensus 400 ~~~~t~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~ 474 (495)
+....+.|...++||+|.|++||++.+. ....||+|.+..... ......|+++|..+ .|.||+++.+++..
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 4444567888999999999999999873 467899999976432 45688999999998 58999999999999
Q ss_pred CCEEEEEEEecCCCCHhhh
Q 040888 475 QGHNILIYDYYRNGSLHEF 493 (495)
Q Consensus 475 ~~~~~lv~ey~~~GsL~~~ 493 (495)
++...+|+||++.-+-.++
T Consensus 107 nd~v~ivlp~~~H~~f~~l 125 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDL 125 (418)
T ss_pred CCeeEEEecccCccCHHHH
Confidence 9999999999998776654
No 450
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=97.78 E-value=1.7e-05 Score=87.87 Aligned_cols=126 Identities=25% Similarity=0.311 Sum_probs=82.9
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCC-CCCCCCCC---CCCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNL-KDSIPYQL---PPNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l-~g~~p~~~---~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
.+..+.+.+|.+.-... . ...+.|++|-+..|.- ...++..+ .+.|+.|||++|.=-+.+|..++.|-+|++|+
T Consensus 524 ~~rr~s~~~~~~~~~~~-~-~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 524 SVRRMSLMNNKIEHIAG-S-SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred heeEEEEeccchhhccC-C-CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 34455555555432211 1 1223577777777752 12333322 27788888887766677888888888888888
Q ss_pred cccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCc
Q 040888 146 LGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQ 198 (495)
Q Consensus 146 L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 198 (495)
|++..++ .+|..+.++..|.+||+..+.-...+|.....+.+|++|.+..-.
T Consensus 602 L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 8888877 778888888888888888777655666666668888888776554
No 451
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.76 E-value=1.1e-05 Score=75.62 Aligned_cols=83 Identities=29% Similarity=0.433 Sum_probs=64.5
Q ss_pred CCEeEEEcCCCCCcc--ccccccCCCCCCcEEECcCCCCCCCCCCC-CC-CCCcEEECcCCcCCCC-cchhccCCCCCcE
Q 040888 69 SSVTEIKLSGLGLNG--QLGYQLTNLKSVSYLDVSNNNLKDSIPYQ-LP-PNLKHLDLSENQFSGT-VPYSISQMSELKY 143 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g--~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~-~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~ 143 (495)
++|..+||.+|.++. .+..-+.+|+.|++|+|+.|.+...|-.. ++ .+|+.|-|.+..+.-. ....+..++.++.
T Consensus 71 ~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vte 150 (418)
T KOG2982|consen 71 TDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTE 150 (418)
T ss_pred hhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhh
Confidence 578999999999884 56667889999999999999998655433 34 7899999988887632 3445677888888
Q ss_pred EEcccCcC
Q 040888 144 LNLGSNQL 151 (495)
Q Consensus 144 L~L~~N~l 151 (495)
|.+|.|++
T Consensus 151 lHmS~N~~ 158 (418)
T KOG2982|consen 151 LHMSDNSL 158 (418)
T ss_pred hhhccchh
Confidence 88888854
No 452
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.75 E-value=0.00011 Score=73.48 Aligned_cols=131 Identities=14% Similarity=0.202 Sum_probs=75.2
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCC-cCCCCcchhccCCCCCcEEEcc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSEN-QFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
..++.|+++++.|+.. |. --++|+.|+++++.--..+|..++++|++|++++| .+. .+|. +|+.|+++
T Consensus 52 ~~l~~L~Is~c~L~sL-P~---LP~sLtsL~Lsnc~nLtsLP~~LP~nLe~L~Ls~Cs~L~-sLP~------sLe~L~L~ 120 (426)
T PRK15386 52 RASGRLYIKDCDIESL-PV---LPNELTEITIENCNNLTTLPGSIPEGLEKLTVCHCPEIS-GLPE------SVRSLEIK 120 (426)
T ss_pred cCCCEEEeCCCCCccc-CC---CCCCCcEEEccCCCCcccCCchhhhhhhheEccCccccc-cccc------ccceEEeC
Confidence 4577888888876643 31 12358888888743334677777788888888887 554 4553 46677777
Q ss_pred cCcCC--CccchhhhCCCCCcEEEccCCc-CC-CcCcccccCCCCCCEEeccCCcccccccccCCccCcEEEeecC
Q 040888 148 SNQLN--GQLSDMFQKNEKLETLDLSKNQ-LT-GELPRSFASLSSLKKLYLQNNQFTGSINVLGKLPLDELNVENN 219 (495)
Q Consensus 148 ~N~l~--g~~p~~~~~l~~L~~L~ls~N~-l~-g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~L~~l~l~~N 219 (495)
.|.+. +.+|. +|+.|.+.+++ .. ..+|..+ -++|++|++++|.....+..+. ..|+.|+++.|
T Consensus 121 ~n~~~~L~~LPs------sLk~L~I~~~n~~~~~~lp~~L--PsSLk~L~Is~c~~i~LP~~LP-~SLk~L~ls~n 187 (426)
T PRK15386 121 GSATDSIKNVPN------GLTSLSINSYNPENQARIDNLI--SPSLKTLSLTGCSNIILPEKLP-ESLQSITLHIE 187 (426)
T ss_pred CCCCcccccCcc------hHhheecccccccccccccccc--CCcccEEEecCCCcccCccccc-ccCcEEEeccc
Confidence 66643 23333 35566654332 11 1112111 1468888888776542221111 12777777766
No 453
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=97.67 E-value=3.3e-05 Score=81.79 Aligned_cols=81 Identities=21% Similarity=0.370 Sum_probs=65.3
Q ss_pred CcccceeccCCceE-EEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEEEe
Q 040888 407 FATGRLLGEGTIGR-VYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 407 f~~~~~iG~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
|...+++|.|+.|+ ||+|.+ +|+.||||++-.+. .....+||..|+.- +|||||+.++.-.++.+.|+..|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~-----~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalEL 584 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF-----FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALEL 584 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh-----HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehH
Confidence 45567889999874 799999 78899999985432 33457899999888 699999988777778899999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
|. -+|.+++
T Consensus 585 C~-~sL~dli 593 (903)
T KOG1027|consen 585 CA-CSLQDLI 593 (903)
T ss_pred hh-hhHHHHH
Confidence 95 4888876
No 454
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=97.67 E-value=7e-05 Score=77.27 Aligned_cols=85 Identities=18% Similarity=0.230 Sum_probs=55.4
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEecCcccccc--------------------------------------cHHHHH
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRA--------------------------------------NSESFS 451 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~--------------------------------------~~~~f~ 451 (495)
.+.||.|++|.||+|++++|+.||||+.+......- .+-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 467999999999999999999999999876421000 001245
Q ss_pred HHHHHHhcC----CCCCcceEEEEE-EeCCEEEEEEEecCCCCHhhhh
Q 040888 452 EIVQNISRI----RHTNIAELVGFC-SEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 452 ~e~~~l~~l----~H~niv~l~g~~-~~~~~~~lv~ey~~~GsL~~~L 494 (495)
+|.+.+.++ +|.+-|.+-..+ ......++||||+++++|.++.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~ 249 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIA 249 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHH
Confidence 566555554 233333322233 2234578999999999987653
No 455
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=97.64 E-value=4.4e-05 Score=84.68 Aligned_cols=129 Identities=25% Similarity=0.300 Sum_probs=102.3
Q ss_pred CCCCCCcEEECcCCCCCCCCCCCCC-CCCcEEECcCCc--CCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCc
Q 040888 90 TNLKSVSYLDVSNNNLKDSIPYQLP-PNLKHLDLSENQ--FSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLE 166 (495)
Q Consensus 90 ~~l~~L~~L~Ls~N~l~g~~p~~~~-~~L~~L~Ls~N~--l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~ 166 (495)
.+....+...+-+|.+. .++.... ++|+.|-+..|. +.-..+..|..++.|++|||++|.=-+.+|..++.+-+|+
T Consensus 520 ~~~~~~rr~s~~~~~~~-~~~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lr 598 (889)
T KOG4658|consen 520 KSWNSVRRMSLMNNKIE-HIAGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLR 598 (889)
T ss_pred cchhheeEEEEeccchh-hccCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhh
Confidence 34467788888888876 3333333 689999999997 5544455688899999999999987789999999999999
Q ss_pred EEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCC
Q 040888 167 TLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNK 220 (495)
Q Consensus 167 ~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~ 220 (495)
+|+|++..++ .+|..+.+|..|.+|++..+.-...+ .....+. |++|.+..-.
T Consensus 599 yL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 599 YLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 9999999998 89999999999999999988755444 3334354 8888875543
No 456
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=97.62 E-value=0.00014 Score=65.95 Aligned_cols=76 Identities=18% Similarity=0.340 Sum_probs=49.4
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHH----------------------HHHHHHHHhcCCCCC--c
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSES----------------------FSEIVQNISRIRHTN--I 465 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~----------------------f~~e~~~l~~l~H~n--i 465 (495)
.+.||+|+||.||+|...+++.||||++............ ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999988999999998754221111111 134555566654443 3
Q ss_pred ceEEEEEEeCCEEEEEEEecCCCC
Q 040888 466 AELVGFCSEQGHNILIYDYYRNGS 489 (495)
Q Consensus 466 v~l~g~~~~~~~~~lv~ey~~~Gs 489 (495)
.+.+++ ...++||||+++|.
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~ 101 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDG 101 (187)
T ss_pred CceEec----CCCEEEEEEeCCCC
Confidence 333332 23589999999853
No 457
>PRK12274 serine/threonine protein kinase; Provisional
Probab=97.59 E-value=0.0003 Score=64.36 Aligned_cols=80 Identities=9% Similarity=0.101 Sum_probs=59.6
Q ss_pred ccceeccCCceEEEEEEcCCCCEEEEEEecCccccc--ccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCCEEEEEEEec
Q 040888 409 TGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQR--ANSESFSEIVQNISRIR-HTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 409 ~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~--~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
....|++|+||+||.+.- .+..++.+.+....... -....|.+|+++|.+++ |+++++++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 457899999999996665 66777777776543210 11225789999999995 5889999886 3468999999
Q ss_pred CCCCHhhh
Q 040888 486 RNGSLHEF 493 (495)
Q Consensus 486 ~~GsL~~~ 493 (495)
++.+|.+.
T Consensus 81 ~G~~L~~~ 88 (218)
T PRK12274 81 AGAAMYQR 88 (218)
T ss_pred cCccHHhh
Confidence 99888654
No 458
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.57 E-value=0.00039 Score=69.73 Aligned_cols=112 Identities=21% Similarity=0.332 Sum_probs=73.5
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCC-CCCCCCCCCCCCCCcEEECcCCcCC--CCcchhccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNN-NLKDSIPYQLPPNLKHLDLSENQFS--GTVPYSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~ 145 (495)
.+|+.|.+.++.--..+|..+ .++|+.|++++| .+. .++++|+.|+|+.|... +.+|. +|+.|.
T Consensus 72 ~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~-----sLP~sLe~L~L~~n~~~~L~~LPs------sLk~L~ 138 (426)
T PRK15386 72 NELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEIS-----GLPESVRSLEIKGSATDSIKNVPN------GLTSLS 138 (426)
T ss_pred CCCcEEEccCCCCcccCCchh--hhhhhheEccCccccc-----ccccccceEEeCCCCCcccccCcc------hHhhee
Confidence 369999998744334555544 258999999998 553 34578999999887754 23443 466777
Q ss_pred cccCcCC--CccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCc
Q 040888 146 LGSNQLN--GQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQ 198 (495)
Q Consensus 146 L~~N~l~--g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 198 (495)
+.+++.. ..+|..+ .++|++|++++|... .+|..+. .+|+.|+++.|.
T Consensus 139 I~~~n~~~~~~lp~~L--PsSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ls~n~ 188 (426)
T PRK15386 139 INSYNPENQARIDNLI--SPSLKTLSLTGCSNI-ILPEKLP--ESLQSITLHIEQ 188 (426)
T ss_pred cccccccccccccccc--CCcccEEEecCCCcc-cCccccc--ccCcEEEecccc
Confidence 7543311 1122211 267999999998876 3454444 589999998874
No 459
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=97.54 E-value=4.9e-05 Score=70.53 Aligned_cols=86 Identities=14% Similarity=0.273 Sum_probs=67.3
Q ss_pred cCCcccceeccCCceEEEEEEcCC-CCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEE-EEeCCEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGF-CSEQGHNILI 481 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~-~~~~~~~~lv 481 (495)
+.|...+.+|+|.||.+..++++. .+.+++|....... ..++|.+|..---.+ .|.||+.-++. +...+..+++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t---t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT---TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh---hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 346778999999999999999964 77899999876543 257899987654444 68999976554 4556777899
Q ss_pred EEecCCCCHhhh
Q 040888 482 YDYYRNGSLHEF 493 (495)
Q Consensus 482 ~ey~~~GsL~~~ 493 (495)
+||+|.|||..-
T Consensus 101 qE~aP~gdL~sn 112 (378)
T KOG1345|consen 101 QEFAPRGDLRSN 112 (378)
T ss_pred eccCccchhhhh
Confidence 999999999764
No 460
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.52 E-value=4.9e-05 Score=79.66 Aligned_cols=88 Identities=14% Similarity=0.225 Sum_probs=56.9
Q ss_pred cCCcccceeccCCceEEEEEEcCC-CCEEEEEEecCccccc--------------------------------ccH----
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQR--------------------------------ANS---- 447 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~--------------------------------~~~---- 447 (495)
.+|+. +.||+|++|.||+|++++ |+.||||+++...... ...
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45665 789999999999999987 9999999997542100 001
Q ss_pred --HHHHHHHHHHhcCC----CCCcceEEEEEEe-CCEEEEEEEecCCCCHhhh
Q 040888 448 --ESFSEIVQNISRIR----HTNIAELVGFCSE-QGHNILIYDYYRNGSLHEF 493 (495)
Q Consensus 448 --~~f~~e~~~l~~l~----H~niv~l~g~~~~-~~~~~lv~ey~~~GsL~~~ 493 (495)
-+|.+|+.-+.+++ +.+.+.+=..+.+ ....++||||++|+.+.++
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~ 251 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV 251 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhH
Confidence 12444554444442 4433433333322 3457899999999998763
No 461
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.50 E-value=0.00011 Score=68.23 Aligned_cols=153 Identities=25% Similarity=0.395 Sum_probs=74.5
Q ss_pred CCEeEEEcCCCCCccc----cccccCCCCCCcEEECcCCCCCCC----CCCCC--------C-CCCcEEECcCCcCCCCc
Q 040888 69 SSVTEIKLSGLGLNGQ----LGYQLTNLKSVSYLDVSNNNLKDS----IPYQL--------P-PNLKHLDLSENQFSGTV 131 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~----~~~~~~~l~~L~~L~Ls~N~l~g~----~p~~~--------~-~~L~~L~Ls~N~l~g~~ 131 (495)
..++.++|++|-+... +...+.+-.+|+..++|.-. +|. +|..+ . |.|+.++||.|.|.-..
T Consensus 30 d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~f-tgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~ 108 (388)
T COG5238 30 DELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAF-TGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEF 108 (388)
T ss_pred cceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhh-hcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCccc
Confidence 3567777777776543 23334445556666665432 222 22111 1 56666666666666555
Q ss_pred chh----ccCCCCCcEEEcccCcCC----Cccchhhh---------CCCCCcEEEccCCcCCCcCcc----cccCCCCCC
Q 040888 132 PYS----ISQMSELKYLNLGSNQLN----GQLSDMFQ---------KNEKLETLDLSKNQLTGELPR----SFASLSSLK 190 (495)
Q Consensus 132 p~~----~~~l~~L~~L~L~~N~l~----g~~p~~~~---------~l~~L~~L~ls~N~l~g~~p~----~~~~l~~L~ 190 (495)
|.. ++.-+.|..|.|++|.+. |.|..++. +-+.|+.+....|+|...... .+..-..|+
T Consensus 109 ~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk 188 (388)
T COG5238 109 PEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESHENLK 188 (388)
T ss_pred chHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhhcCce
Confidence 543 344566666666666653 11221111 234566666666666421110 111223566
Q ss_pred EEeccCCccccc--c-cc---cCC-ccCcEEEeecCCCc
Q 040888 191 KLYLQNNQFTGS--I-NV---LGK-LPLDELNVENNKFS 222 (495)
Q Consensus 191 ~L~l~~N~l~g~--~-~~---~~~-~~L~~l~l~~N~l~ 222 (495)
.+.+.+|.+.-. . -. +.. ..|+.||+.+|.|+
T Consensus 189 ~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft 227 (388)
T COG5238 189 EVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFT 227 (388)
T ss_pred eEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchh
Confidence 666666655411 1 00 111 12566666666665
No 462
>PHA02882 putative serine/threonine kinase; Provisional
Probab=97.48 E-value=0.00047 Score=67.36 Aligned_cols=82 Identities=17% Similarity=0.218 Sum_probs=53.2
Q ss_pred cCCcccceeccCCceEEEEEEcCC----CCEEEEEEecCccccccc---------HHHHHHHHHHHhcCCCCCcceEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD----GKVLAVKKIDSSHFQRAN---------SESFSEIVQNISRIRHTNIAELVGF 471 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~---------~~~f~~e~~~l~~l~H~niv~l~g~ 471 (495)
+.|...+.||+|+||.||+|...+ +..+|+|........... ......+...+..++|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 457778999999999999999754 345666654322111000 1122334455677899999999998
Q ss_pred EEeCC----EEEEEEEecC
Q 040888 472 CSEQG----HNILIYDYYR 486 (495)
Q Consensus 472 ~~~~~----~~~lv~ey~~ 486 (495)
+.... ..++++|+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~ 110 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV 110 (294)
T ss_pred eeEecCCceEEEEEEehhc
Confidence 76543 3467777764
No 463
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.47 E-value=6.9e-06 Score=75.99 Aligned_cols=87 Identities=21% Similarity=0.360 Sum_probs=65.8
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC-----EEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG-----HNI 479 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~ 479 (495)
+.+..+.||-|+||.||..+. ++|+.||.|++..-...-...+.+.+|++++...+|.|+...++...... +.|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 445678999999999999998 57999999998643221123577889999999999999999888776542 456
Q ss_pred EEEEecCCCCHhhh
Q 040888 480 LIYDYYRNGSLHEF 493 (495)
Q Consensus 480 lv~ey~~~GsL~~~ 493 (495)
+|.|.|.. ||+..
T Consensus 134 V~TELmQS-DLHKI 146 (449)
T KOG0664|consen 134 VLTELMQS-DLHKI 146 (449)
T ss_pred HHHHHHHh-hhhhe
Confidence 77777743 55543
No 464
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=97.43 E-value=0.00076 Score=65.61 Aligned_cols=86 Identities=31% Similarity=0.551 Sum_probs=71.5
Q ss_pred CcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccc-cHHHHHHHHHHHhcCCCC-CcceEEEEEEeCCEEEEEEEe
Q 040888 407 FATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRA-NSESFSEIVQNISRIRHT-NIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~-~~~~f~~e~~~l~~l~H~-niv~l~g~~~~~~~~~lv~ey 484 (495)
|.....||.|+||.||++... ..+++|.+........ ..+.|.+|+..+..+.|+ +++++..++......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 445678999999999999987 7889999976544322 367899999999999988 799999999777778999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+.++++.+++
T Consensus 80 ~~~~~l~~~~ 89 (384)
T COG0515 80 VDGGSLEDLL 89 (384)
T ss_pred CCCCcHHHHH
Confidence 9999998553
No 465
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.42 E-value=0.00031 Score=62.64 Aligned_cols=100 Identities=26% Similarity=0.298 Sum_probs=53.4
Q ss_pred CCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCc-CcccccCCCCCCEEec
Q 040888 116 NLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGE-LPRSFASLSSLKKLYL 194 (495)
Q Consensus 116 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~l~~L~~L~l 194 (495)
+...+||++|.+-. -..|..++.|.+|.|++|+|+..-|..-.-+++|..|.|.+|.|... --.-+..|++|++|-+
T Consensus 43 ~~d~iDLtdNdl~~--l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRK--LDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccceecccccchhh--cccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 44455555555531 12344556666666666666655555444455566666666665421 0112456677777777
Q ss_pred cCCcccccc----cccCCcc-CcEEEee
Q 040888 195 QNNQFTGSI----NVLGKLP-LDELNVE 217 (495)
Q Consensus 195 ~~N~l~g~~----~~~~~~~-L~~l~l~ 217 (495)
-+|..+..- -.+..++ |+.||.+
T Consensus 121 l~Npv~~k~~YR~yvl~klp~l~~LDF~ 148 (233)
T KOG1644|consen 121 LGNPVEHKKNYRLYVLYKLPSLRTLDFQ 148 (233)
T ss_pred cCCchhcccCceeEEEEecCcceEeehh
Confidence 777665432 1233444 5666554
No 466
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=97.30 E-value=1.1e-05 Score=75.73 Aligned_cols=158 Identities=23% Similarity=0.260 Sum_probs=89.2
Q ss_pred CEeEEEcCCCCCcc-ccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCc-CCCC-cchhccCCCCCcEE
Q 040888 70 SVTEIKLSGLGLNG-QLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQ-FSGT-VPYSISQMSELKYL 144 (495)
Q Consensus 70 ~v~~l~L~~n~l~g-~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~-l~g~-~p~~~~~l~~L~~L 144 (495)
+|+.+||+.-.++- ++-.-+..++.|+.|.|.++++.+.|-..+. .+|+.|||+..+ |+.. ..--+.+++.|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 57777777777653 2333456677788888888888776665555 678888887643 3311 11235677888888
Q ss_pred EcccCcCCCccchh-hhC-CCCCcEEEccCCc---CCCcCcccccCCCCCCEEeccCCcc-ccc-ccccCCcc-CcEEEe
Q 040888 145 NLGSNQLNGQLSDM-FQK-NEKLETLDLSKNQ---LTGELPRSFASLSSLKKLYLQNNQF-TGS-INVLGKLP-LDELNV 216 (495)
Q Consensus 145 ~L~~N~l~g~~p~~-~~~-l~~L~~L~ls~N~---l~g~~p~~~~~l~~L~~L~l~~N~l-~g~-~~~~~~~~-L~~l~l 216 (495)
+|+.+.++...-.. ..+ -.+|+.|+|++.. ...-+..-...+++|..|||+.|.- +.. +..+..++ |++|.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 88888775433111 111 1345556665532 1111222234567777777777653 221 24444455 677666
Q ss_pred ecCCCcccCchhh
Q 040888 217 ENNKFSGWVPEEL 229 (495)
Q Consensus 217 ~~N~l~g~~p~~l 229 (495)
+.+. +.+|..+
T Consensus 346 sRCY--~i~p~~~ 356 (419)
T KOG2120|consen 346 SRCY--DIIPETL 356 (419)
T ss_pred hhhc--CCChHHe
Confidence 6553 4455443
No 467
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.26 E-value=0.00045 Score=69.20 Aligned_cols=86 Identities=16% Similarity=0.338 Sum_probs=67.6
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-----C---CCcceEEEEEEeC
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-----H---TNIAELVGFCSEQ 475 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-----H---~niv~l~g~~~~~ 475 (495)
+.|-..++||=|.|++||.|... +.+.||+|+.+... ...+.-+.||++|++++ | ..||+|+++|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq---hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ---HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh---HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 45777899999999999999874 57799999987543 33566788999999874 2 4699999999764
Q ss_pred ----CEEEEEEEecCCCCHhhhh
Q 040888 476 ----GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 ----~~~~lv~ey~~~GsL~~~L 494 (495)
...+||+||. +-+|..+|
T Consensus 155 GpNG~HVCMVfEvL-GdnLLklI 176 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVL-GDNLLKLI 176 (590)
T ss_pred CCCCcEEEEEehhh-hhHHHHHH
Confidence 3678999998 55776665
No 468
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.18 E-value=0.00071 Score=60.41 Aligned_cols=105 Identities=25% Similarity=0.264 Sum_probs=64.7
Q ss_pred CCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCC--ccchhhhCCCCCcEEEcc
Q 040888 94 SVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNG--QLSDMFQKNEKLETLDLS 171 (495)
Q Consensus 94 ~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~ls 171 (495)
....+||++|.+....-....+.|..|.|++|+|+..-|.--.-+++|..|.|.+|+|.- .+. -+..++.|++|.+-
T Consensus 43 ~~d~iDLtdNdl~~l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~-pLa~~p~L~~Ltll 121 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKLDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLD-PLASCPKLEYLTLL 121 (233)
T ss_pred ccceecccccchhhcccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcc-hhccCCccceeeec
Confidence 456677777766532212223677777777777774444433445667778888877642 111 24567788888888
Q ss_pred CCcCCCcC---cccccCCCCCCEEeccCCcc
Q 040888 172 KNQLTGEL---PRSFASLSSLKKLYLQNNQF 199 (495)
Q Consensus 172 ~N~l~g~~---p~~~~~l~~L~~L~l~~N~l 199 (495)
+|..+..- ---+..+++|+.||.+.=..
T Consensus 122 ~Npv~~k~~YR~yvl~klp~l~~LDF~kVt~ 152 (233)
T KOG1644|consen 122 GNPVEHKKNYRLYVLYKLPSLRTLDFQKVTR 152 (233)
T ss_pred CCchhcccCceeEEEEecCcceEeehhhhhH
Confidence 88876321 12356788999999765443
No 469
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=97.17 E-value=0.00025 Score=63.47 Aligned_cols=85 Identities=20% Similarity=0.282 Sum_probs=67.0
Q ss_pred CcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhc-CCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISR-IRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+.....||+|++|.|-+-++ .+|+..|||+++..-. .+..++...|+.+..+ ...|.+|+++|.+......++.||.
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~ 126 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMEL 126 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHH
Confidence 33457799999999988777 5799999999976532 2345677888887555 5899999999999999999999999
Q ss_pred cCCCCHhhh
Q 040888 485 YRNGSLHEF 493 (495)
Q Consensus 485 ~~~GsL~~~ 493 (495)
|.- ||+.+
T Consensus 127 M~t-Sldkf 134 (282)
T KOG0984|consen 127 MDT-SLDKF 134 (282)
T ss_pred hhh-hHHHH
Confidence 964 66543
No 470
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=97.15 E-value=0.00017 Score=67.11 Aligned_cols=76 Identities=16% Similarity=0.310 Sum_probs=61.6
Q ss_pred cceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCCEEEEEEEecC
Q 040888 410 GRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
...||.|..|.|+++.++ .|...|||.+...... ...++.+..++++.+.+ .|.||+.+|||..+...++.||.|.
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nk-ee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs 174 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS 174 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCH-HHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence 467999999999999985 5889999999875432 23456777788877764 8999999999999988888888774
No 471
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=97.05 E-value=0.00035 Score=67.99 Aligned_cols=88 Identities=22% Similarity=0.333 Sum_probs=68.8
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCC--C----CcceEEEEEEeCC
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRH--T----NIAELVGFCSEQG 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H--~----niv~l~g~~~~~~ 476 (495)
++.|.....+|+|.||+|-++... .+..||||+++.-.. ..+.-.-|++++.++.+ | -+|.+.+++.-.+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k---YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg 164 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK---YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG 164 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH---HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence 566778899999999999999874 478999999976432 24556778999999832 2 3677888888889
Q ss_pred EEEEEEEecCCCCHhhhhC
Q 040888 477 HNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L~ 495 (495)
..++|+|.| +-|++++|+
T Consensus 165 hiCivfell-G~S~~dFlk 182 (415)
T KOG0671|consen 165 HICIVFELL-GLSTFDFLK 182 (415)
T ss_pred ceEEEEecc-ChhHHHHhc
Confidence 999999988 447888763
No 472
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=96.96 E-value=0.00048 Score=71.26 Aligned_cols=85 Identities=20% Similarity=0.228 Sum_probs=68.2
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 481 (495)
++.|.....+|+|+|+.|-++.. ++++..+||.+.+... +-.+|+.++... +||||+++.+.|..+...++|
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v 394 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV 394 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc------ccccccchhhhhcCCCcceeecceecCCceeeee
Confidence 45666677799999999999988 5688899999976521 234566555554 799999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
||.+.+|.+.+.+
T Consensus 395 ~e~l~g~ell~ri 407 (612)
T KOG0603|consen 395 MELLDGGELLRRI 407 (612)
T ss_pred ehhccccHHHHHH
Confidence 9999998876643
No 473
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=96.91 E-value=0.0036 Score=59.18 Aligned_cols=84 Identities=8% Similarity=0.137 Sum_probs=60.1
Q ss_pred cceec-cCCceEEEEEEcCCCCEEEEEEecCccc-----------ccccHHHHHHHHHHHhcCCCCCc--ceEEEEEEeC
Q 040888 410 GRLLG-EGTIGRVYRAKYPDGKVLAVKKIDSSHF-----------QRANSESFSEIVQNISRIRHTNI--AELVGFCSEQ 475 (495)
Q Consensus 410 ~~~iG-~G~~g~Vy~~~~~~g~~vavK~l~~~~~-----------~~~~~~~f~~e~~~l~~l~H~ni--v~l~g~~~~~ 475 (495)
..+|| .|+.|+||..... +..++||....... .......+.+|++++.+++|+++ ++.++++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999885 66788988753211 01123467889999999999885 6777775443
Q ss_pred C-E---EEEEEEecCC-CCHhhhh
Q 040888 476 G-H---NILIYDYYRN-GSLHEFL 494 (495)
Q Consensus 476 ~-~---~~lv~ey~~~-GsL~~~L 494 (495)
. . .++|+||+++ ++|.+++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l 138 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALL 138 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHH
Confidence 2 2 2599999997 6887764
No 474
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.90 E-value=0.0015 Score=60.01 Aligned_cols=84 Identities=19% Similarity=0.310 Sum_probs=63.8
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCC-CCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRH-TNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H-~niv~l~g~~~~~~~~~lv~ 482 (495)
+.|...+.||+|+||.+|.|.. .+|..||+|.=..... ..+...|.++-.-++| ..|..+.-|..+...-.+||
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC----CcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 4677889999999999999986 6799999998654322 2356677777777765 45666666777778889999
Q ss_pred EecCCCCHhhh
Q 040888 483 DYYRNGSLHEF 493 (495)
Q Consensus 483 ey~~~GsL~~~ 493 (495)
|.. +-+|.+.
T Consensus 91 dLL-GPsLEdL 100 (341)
T KOG1163|consen 91 DLL-GPSLEDL 100 (341)
T ss_pred ecc-CccHHHH
Confidence 987 5677664
No 475
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=96.83 E-value=0.0021 Score=59.55 Aligned_cols=82 Identities=11% Similarity=0.249 Sum_probs=61.6
Q ss_pred ceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCC--CcceEEEEEEeCC---EEEEEEEec
Q 040888 411 RLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHT--NIAELVGFCSEQG---HNILIYDYY 485 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~--niv~l~g~~~~~~---~~~lv~ey~ 485 (495)
..|+.|..+.+|+++..+|..+++|........ .....+..|++++..+++. ++.+++.++.... ..++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 568999999999999877788999997654321 1245688999999998764 4566777776542 568999999
Q ss_pred CCCCHhhh
Q 040888 486 RNGSLHEF 493 (495)
Q Consensus 486 ~~GsL~~~ 493 (495)
+++++.+.
T Consensus 83 ~G~~l~~~ 90 (223)
T cd05154 83 DGRVLRDR 90 (223)
T ss_pred CCEecCCC
Confidence 99877653
No 476
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=96.80 E-value=0.00044 Score=74.95 Aligned_cols=109 Identities=16% Similarity=0.256 Sum_probs=51.1
Q ss_pred CCCcEEECcCCcCCC-CcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCC-cCcccccCCCCCCEE
Q 040888 115 PNLKHLDLSENQFSG-TVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTG-ELPRSFASLSSLKKL 192 (495)
Q Consensus 115 ~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L 192 (495)
|+|+.|.+++=.|.. ..-.-..++++|..||+|+.+++.. ..++++.+|+.|.+.+=.+.. ..-..+.+|++|+.|
T Consensus 148 PsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~vL 225 (699)
T KOG3665|consen 148 PSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRVL 225 (699)
T ss_pred cccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCee
Confidence 555555555544432 1222234455555555555555432 334555555555554444331 111234456666666
Q ss_pred eccCCcccccc-------cccCCcc-CcEEEeecCCCcccC
Q 040888 193 YLQNNQFTGSI-------NVLGKLP-LDELNVENNKFSGWV 225 (495)
Q Consensus 193 ~l~~N~l~g~~-------~~~~~~~-L~~l~l~~N~l~g~~ 225 (495)
|+|........ ..-..+| |+.||.|+..++..+
T Consensus 226 DIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~ 266 (699)
T KOG3665|consen 226 DISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEI 266 (699)
T ss_pred eccccccccchHHHHHHHHhcccCccccEEecCCcchhHHH
Confidence 66655543221 1112234 666666666555443
No 477
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=96.78 E-value=0.00022 Score=67.22 Aligned_cols=150 Identities=22% Similarity=0.216 Sum_probs=75.9
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCC-CCCCCCCCCC---CCCCcEEECcCCcCCCCcchh-cc-CCCCCc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNN-NLKDSIPYQL---PPNLKHLDLSENQFSGTVPYS-IS-QMSELK 142 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N-~l~g~~p~~~---~~~L~~L~Ls~N~l~g~~p~~-~~-~l~~L~ 142 (495)
..++.|.|.++.|...+-..+..-.+|+.|||+.. .|+..--..+ .+.|+.|+|+-+.++.+.-.. +. --++|+
T Consensus 210 ~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~ 289 (419)
T KOG2120|consen 210 SKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLT 289 (419)
T ss_pred HhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhh
Confidence 35666777777777777666666667777777654 2321100000 145666666666555322111 11 113555
Q ss_pred EEEcccCc---CCCccchhhhCCCCCcEEEccCCc-CCCcCcccccCCCCCCEEeccCCcccccc--cccCCcc-CcEEE
Q 040888 143 YLNLGSNQ---LNGQLSDMFQKNEKLETLDLSKNQ-LTGELPRSFASLSSLKKLYLQNNQFTGSI--NVLGKLP-LDELN 215 (495)
Q Consensus 143 ~L~L~~N~---l~g~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l~~L~~L~l~~N~l~g~~--~~~~~~~-L~~l~ 215 (495)
.|+|++.. ....+......+++|..||||+|. |+...-..|..++.|++|.|+.+..--.- -.+...| |.+||
T Consensus 290 ~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~i~p~~~~~l~s~psl~yLd 369 (419)
T KOG2120|consen 290 QLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYDIIPETLLELNSKPSLVYLD 369 (419)
T ss_pred hhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhhcCCChHHeeeeccCcceEEEE
Confidence 66666542 112233334556666666666654 44333344556666666666655432111 1233334 66666
Q ss_pred eec
Q 040888 216 VEN 218 (495)
Q Consensus 216 l~~ 218 (495)
+.+
T Consensus 370 v~g 372 (419)
T KOG2120|consen 370 VFG 372 (419)
T ss_pred ecc
Confidence 643
No 478
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.72 E-value=0.0012 Score=61.25 Aligned_cols=38 Identities=39% Similarity=0.633 Sum_probs=19.1
Q ss_pred CCCcEEECcCC--cCCCCcchhccCCCCCcEEEcccCcCC
Q 040888 115 PNLKHLDLSEN--QFSGTVPYSISQMSELKYLNLGSNQLN 152 (495)
Q Consensus 115 ~~L~~L~Ls~N--~l~g~~p~~~~~l~~L~~L~L~~N~l~ 152 (495)
++|+.|++|.| ..++.++.-...+++|++|+|++|++.
T Consensus 65 p~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 65 PKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred chhhhhcccCCcccccccceehhhhCCceeEEeecCCccc
Confidence 45555555555 333444433344455555555555543
No 479
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.60 E-value=0.0061 Score=60.47 Aligned_cols=85 Identities=19% Similarity=0.323 Sum_probs=63.5
Q ss_pred CCcccceeccCCceEEEEEEcCCC--CEEEEEEecCcccccccHHHHHHHHHHHhcCCC----CCcceEEEEE-EeCCEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPDG--KVLAVKKIDSSHFQRANSESFSEIVQNISRIRH----TNIAELVGFC-SEQGHN 478 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~g--~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H----~niv~l~g~~-~~~~~~ 478 (495)
.|...+.||+|+||.||.+..... ..+|+|.-....... ...+..|+.++..+.+ +++..+++.. ....+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~--~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK--PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC--CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 677889999999999999997543 478888765532211 1267788888888863 5788888888 477788
Q ss_pred EEEEEecCCCCHhhh
Q 040888 479 ILIYDYYRNGSLHEF 493 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~ 493 (495)
++||+.. +-+|.+.
T Consensus 97 ~iVM~l~-G~sL~dl 110 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDL 110 (322)
T ss_pred EEEEecc-CccHHHH
Confidence 9999976 5677764
No 480
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.57 E-value=0.0013 Score=72.63 Aligned_cols=87 Identities=24% Similarity=0.413 Sum_probs=61.5
Q ss_pred hccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC---CCCcceEEEEEEeCCEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR---HTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~---H~niv~l~g~~~~~~~~~ 479 (495)
.-+.|.+...||+|+||+||+|...+|+.||+|.-+...... |.==.+++.|++ -+.|..+...+.-.+.-+
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE-----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~ 770 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE-----FYICLQVMERLKPQMLPSIMHISSAHVFQNASV 770 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee-----eeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence 345677889999999999999999889999999976654321 111123344444 133444444555567778
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+|.||.+.|+|.+++
T Consensus 771 lv~ey~~~Gtlld~~ 785 (974)
T KOG1166|consen 771 LVSEYSPYGTLLDLI 785 (974)
T ss_pred eeeeccccccHHHhh
Confidence 999999999998875
No 481
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.56 E-value=0.0005 Score=64.85 Aligned_cols=83 Identities=25% Similarity=0.354 Sum_probs=39.1
Q ss_pred CCcEEECcCCcCCC--CcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCc-CcccccCCCCCCEE
Q 040888 116 NLKHLDLSENQFSG--TVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGE-LPRSFASLSSLKKL 192 (495)
Q Consensus 116 ~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~l~~L~~L 192 (495)
.++.|||.+|.|+. +|..-+.+|+.|+.|+|+.|+++..|-..-..+.+|+.|-|.+..|.-. .-..+..++.++.|
T Consensus 72 ~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtel 151 (418)
T KOG2982|consen 72 DVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTEL 151 (418)
T ss_pred hhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhh
Confidence 44445555555542 2333344555555555555555544332222344555555555444321 22234445555555
Q ss_pred eccCCc
Q 040888 193 YLQNNQ 198 (495)
Q Consensus 193 ~l~~N~ 198 (495)
.++.|+
T Consensus 152 HmS~N~ 157 (418)
T KOG2982|consen 152 HMSDNS 157 (418)
T ss_pred hhccch
Confidence 555553
No 482
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=96.41 E-value=0.00022 Score=71.72 Aligned_cols=91 Identities=20% Similarity=0.210 Sum_probs=73.4
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCC-EEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGK-VLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~-~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
..++.....||-|+||.|=........ .+|+|.+++...- ....+....|-.+|.+.+.|.||+++--|.++++.|+.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 345666678999999999988875433 4889988765432 22345677899999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
||-|-+|+|...|
T Consensus 499 mEaClGGElWTiL 511 (732)
T KOG0614|consen 499 MEACLGGELWTIL 511 (732)
T ss_pred HHhhcCchhhhhh
Confidence 9999999997765
No 483
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=96.28 E-value=0.0025 Score=69.15 Aligned_cols=133 Identities=23% Similarity=0.259 Sum_probs=94.6
Q ss_pred CCEeEEEcCCCCCcc-ccccccC-CCCCCcEEECcCCCCCCCCCCCC---CCCCcEEECcCCcCCCCcchhccCCCCCcE
Q 040888 69 SSVTEIKLSGLGLNG-QLGYQLT-NLKSVSYLDVSNNNLKDSIPYQL---PPNLKHLDLSENQFSGTVPYSISQMSELKY 143 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g-~~~~~~~-~l~~L~~L~Ls~N~l~g~~p~~~---~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 143 (495)
.+++.|+++|...-. .-|..++ -||+|+.|.+++=.+...--..+ .|+|..||+|+.+++-. ..+++|.+|+.
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 467888887765432 2223333 47899999999877653211111 28999999999999844 67899999999
Q ss_pred EEcccCcCCC-ccchhhhCCCCCcEEEccCCcCCCcC--c----ccccCCCCCCEEeccCCcccccc
Q 040888 144 LNLGSNQLNG-QLSDMFQKNEKLETLDLSKNQLTGEL--P----RSFASLSSLKKLYLQNNQFTGSI 203 (495)
Q Consensus 144 L~L~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~~--p----~~~~~l~~L~~L~l~~N~l~g~~ 203 (495)
|.+.+=.|.. ..-..+.++++|+.||+|........ . +.-..|++|+.||.++..++..+
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~ 266 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEI 266 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHH
Confidence 9998877763 22345678999999999998765331 1 12235899999999999887654
No 484
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=96.17 E-value=0.0019 Score=36.17 Aligned_cols=19 Identities=47% Similarity=0.716 Sum_probs=9.3
Q ss_pred CcEEECcCCcCCCCcchhcc
Q 040888 117 LKHLDLSENQFSGTVPYSIS 136 (495)
Q Consensus 117 L~~L~Ls~N~l~g~~p~~~~ 136 (495)
|++|||++|+|+ .+|..|+
T Consensus 2 L~~Ldls~n~l~-~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSFS 20 (22)
T ss_dssp ESEEEETSSEES-EEGTTTT
T ss_pred ccEEECCCCcCE-eCChhhc
Confidence 445555555555 4444443
No 485
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=96.10 E-value=0.01 Score=52.48 Aligned_cols=75 Identities=17% Similarity=0.158 Sum_probs=53.9
Q ss_pred ceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcce-EEEEEEeCCEEEEEEEecCCCC
Q 040888 411 RLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAE-LVGFCSEQGHNILIYDYYRNGS 489 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~-l~g~~~~~~~~~lv~ey~~~Gs 489 (495)
+.++.|.++.||++... +..+++|....... ....+..|++.+..+.+.++++ ++.+. ....++||||+++.+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~ 77 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSE 77 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCc
Confidence 56889999999999875 67899998764321 1234678888888887666554 44332 334579999999987
Q ss_pred Hh
Q 040888 490 LH 491 (495)
Q Consensus 490 L~ 491 (495)
+.
T Consensus 78 l~ 79 (170)
T cd05151 78 LL 79 (170)
T ss_pred cc
Confidence 75
No 486
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.07 E-value=0.0038 Score=58.08 Aligned_cols=60 Identities=25% Similarity=0.401 Sum_probs=28.8
Q ss_pred CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccC--cCCCccchhhhCCCCCcEEEccCCcCC
Q 040888 115 PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSN--QLNGQLSDMFQKNEKLETLDLSKNQLT 176 (495)
Q Consensus 115 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N--~l~g~~p~~~~~l~~L~~L~ls~N~l~ 176 (495)
..|+.|.+.+-.++.. ..+-.|++|+.|.++.| .+++.++-....+++|++|+|++|++.
T Consensus 43 ~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 43 VELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred cchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc
Confidence 3445555444444311 12334455555555555 344444444444455555555555554
No 487
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.95 E-value=0.003 Score=35.36 Aligned_cols=19 Identities=63% Similarity=0.898 Sum_probs=9.8
Q ss_pred CcEEEccCCcCCCcCccccc
Q 040888 165 LETLDLSKNQLTGELPRSFA 184 (495)
Q Consensus 165 L~~L~ls~N~l~g~~p~~~~ 184 (495)
|++|||++|+|+ .+|.+|+
T Consensus 2 L~~Ldls~n~l~-~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSFS 20 (22)
T ss_dssp ESEEEETSSEES-EEGTTTT
T ss_pred ccEEECCCCcCE-eCChhhc
Confidence 455555555555 4554443
No 488
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=95.89 E-value=0.026 Score=47.37 Aligned_cols=96 Identities=18% Similarity=0.280 Sum_probs=33.9
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCC-C--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQL-P--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
.++.+.+.. .+...-...|.++++|+.+++..+ +. .++... . ++|+.+.+.+ .+...-...|..+++|+.+++
T Consensus 13 ~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~-~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~~i~~ 88 (129)
T PF13306_consen 13 NLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LT-SIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLKNIDI 88 (129)
T ss_dssp T--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TS-CE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTECEEEE
T ss_pred CCCEEEECC-CeeEeChhhccccccccccccccc-cc-ccceeeeecccccccccccc-ccccccccccccccccccccc
Confidence 455555553 344444445566656666666553 32 122111 1 2455555543 222122233444455555555
Q ss_pred ccCcCCCccchhhhCCCCCcEEEcc
Q 040888 147 GSNQLNGQLSDMFQKNEKLETLDLS 171 (495)
Q Consensus 147 ~~N~l~g~~p~~~~~l~~L~~L~ls 171 (495)
..| +...-...|.+. +|+.+.+.
T Consensus 89 ~~~-~~~i~~~~f~~~-~l~~i~~~ 111 (129)
T PF13306_consen 89 PSN-ITEIGSSSFSNC-NLKEINIP 111 (129)
T ss_dssp TTT--BEEHTTTTTT--T--EEE-T
T ss_pred Ccc-ccEEchhhhcCC-CceEEEEC
Confidence 443 332222334343 44444444
No 489
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=95.38 E-value=0.0052 Score=58.73 Aligned_cols=84 Identities=18% Similarity=0.254 Sum_probs=60.1
Q ss_pred ccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC------EEEEE
Q 040888 409 TGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG------HNILI 481 (495)
Q Consensus 409 ~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------~~~lv 481 (495)
....+|.|.- .|-.+.. -.++.||+|++..........++-.+|..++..+.|+|+++++.++...+ +.++|
T Consensus 21 nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v 99 (369)
T KOG0665|consen 21 NLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLV 99 (369)
T ss_pred eecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHH
Confidence 3455666665 3433333 24789999998655322334567789999999999999999999997653 46899
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
||||. ++|.+.+
T Consensus 100 ~e~m~-~nl~~vi 111 (369)
T KOG0665|consen 100 MELMD-ANLCQVI 111 (369)
T ss_pred HHhhh-hHHHHHH
Confidence 99995 4777664
No 490
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=95.36 E-value=0.017 Score=54.05 Aligned_cols=139 Identities=23% Similarity=0.305 Sum_probs=96.9
Q ss_pred cccCCCCCCcEEECcCCCCCCCCCCCCC------CCCcEEECcCCcCCC----Ccchh---------ccCCCCCcEEEcc
Q 040888 87 YQLTNLKSVSYLDVSNNNLKDSIPYQLP------PNLKHLDLSENQFSG----TVPYS---------ISQMSELKYLNLG 147 (495)
Q Consensus 87 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~------~~L~~L~Ls~N~l~g----~~p~~---------~~~l~~L~~L~L~ 147 (495)
+.+-.|+.|+..|||.|.|.-..|..+. +.|.+|.|++|.+.- .|... ..+-+.|+.....
T Consensus 86 ~aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicg 165 (388)
T COG5238 86 KALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICG 165 (388)
T ss_pred HHHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEec
Confidence 4567889999999999998877775543 789999999998752 12211 2345789999999
Q ss_pred cCcCCC-cc---chhhhCCCCCcEEEccCCcCCCc-----CcccccCCCCCCEEeccCCccccc--c---cccCCcc-Cc
Q 040888 148 SNQLNG-QL---SDMFQKNEKLETLDLSKNQLTGE-----LPRSFASLSSLKKLYLQNNQFTGS--I---NVLGKLP-LD 212 (495)
Q Consensus 148 ~N~l~g-~~---p~~~~~l~~L~~L~ls~N~l~g~-----~p~~~~~l~~L~~L~l~~N~l~g~--~---~~~~~~~-L~ 212 (495)
.|+|.. .- ...+..-..|+.+.+..|.|.-. +-..+..+.+|+.|||..|-|+-. . ..+...+ |+
T Consensus 166 rNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lr 245 (388)
T COG5238 166 RNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLR 245 (388)
T ss_pred cchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhh
Confidence 999852 21 12344446899999999988622 111234578999999999999832 2 2344445 78
Q ss_pred EEEeecCCCcccC
Q 040888 213 ELNVENNKFSGWV 225 (495)
Q Consensus 213 ~l~l~~N~l~g~~ 225 (495)
.|.+.++.++..-
T Consensus 246 EL~lnDClls~~G 258 (388)
T COG5238 246 ELRLNDCLLSNEG 258 (388)
T ss_pred hccccchhhcccc
Confidence 8999888887543
No 491
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.31 E-value=0.033 Score=53.76 Aligned_cols=83 Identities=20% Similarity=0.338 Sum_probs=56.0
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+|...++||+|+||..+.|+- -+++.||||.=..... .-+...|-+.-.-+ .-+.|...+-+-.++..-.||+|
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~----APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE----APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCC----cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 577789999999999999984 5789999997543322 12333444333333 45777776655555556679999
Q ss_pred ecCCCCHhhh
Q 040888 484 YYRNGSLHEF 493 (495)
Q Consensus 484 y~~~GsL~~~ 493 (495)
.. +-+|.+.
T Consensus 105 LL-GPSLEDL 113 (449)
T KOG1165|consen 105 LL-GPSLEDL 113 (449)
T ss_pred hh-CcCHHHH
Confidence 87 5577654
No 492
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=95.27 E-value=0.046 Score=48.39 Aligned_cols=76 Identities=16% Similarity=0.268 Sum_probs=55.7
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCCC
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNGS 489 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 489 (495)
...|++|.+|.||.|.+.. ..+|+|+-+.+. ....+..|++++..+.--++-+=+-.+ ++.++.|||+.+-.
T Consensus 27 ~~~L~KG~~s~Vyl~~~~~-~~~a~Kvrr~ds----~r~~l~kEakiLeil~g~~~~p~vy~y---g~~~i~me~i~G~~ 98 (201)
T COG2112 27 EKELAKGTTSVVYLGEWRG-GEVALKVRRRDS----PRRNLEKEAKILEILAGEGVTPEVYFY---GEDFIRMEYIDGRP 98 (201)
T ss_pred hhhhhcccccEEEEeeccC-ceEEEEEecCCc----chhhHHHHHHHHHHhhhcCCCceEEEe---chhhhhhhhhcCcc
Confidence 4779999999999999954 478998876543 256789999999988877766533222 22345599998867
Q ss_pred Hhhh
Q 040888 490 LHEF 493 (495)
Q Consensus 490 L~~~ 493 (495)
|.++
T Consensus 99 L~~~ 102 (201)
T COG2112 99 LGKL 102 (201)
T ss_pred hhhh
Confidence 7553
No 493
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=95.10 E-value=0.062 Score=45.02 Aligned_cols=102 Identities=19% Similarity=0.327 Sum_probs=42.4
Q ss_pred ccCCCCCCcEEECcCCCCCCCCCCC-CC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCC
Q 040888 88 QLTNLKSVSYLDVSNNNLKDSIPYQ-LP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEK 164 (495)
Q Consensus 88 ~~~~l~~L~~L~Ls~N~l~g~~p~~-~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~ 164 (495)
.|.++++|+.+.+.. .+. .++.. +. ++|+.+++.++ +...-...|.++.+|+.+.+.+ .+...-...|..+++
T Consensus 7 ~F~~~~~l~~i~~~~-~~~-~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~ 82 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIK-KIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTN 82 (129)
T ss_dssp TTTT-TT--EEEETS-T---EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TT
T ss_pred HHhCCCCCCEEEECC-Cee-EeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccc
Confidence 466666777777763 333 22222 21 45666666554 4433334455555666666644 333233344555566
Q ss_pred CcEEEccCCcCCCcCcccccCCCCCCEEecc
Q 040888 165 LETLDLSKNQLTGELPRSFASLSSLKKLYLQ 195 (495)
Q Consensus 165 L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 195 (495)
|+.+++..| ++..-...|.++ +|+.+.+.
T Consensus 83 l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~ 111 (129)
T PF13306_consen 83 LKNIDIPSN-ITEIGSSSFSNC-NLKEINIP 111 (129)
T ss_dssp ECEEEETTT--BEEHTTTTTT--T--EEE-T
T ss_pred ccccccCcc-ccEEchhhhcCC-CceEEEEC
Confidence 666666554 332333344444 55555544
No 494
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.48 E-value=0.0018 Score=60.56 Aligned_cols=61 Identities=31% Similarity=0.366 Sum_probs=25.7
Q ss_pred CCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccc-hhhhCCCCCcEEEccCCcCCCc
Q 040888 116 NLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLS-DMFQKNEKLETLDLSKNQLTGE 178 (495)
Q Consensus 116 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~ 178 (495)
.|+.|.||-|.|+..-| +..|++|++|+|..|.|...-. ..+.++++|+.|-|..|.-.|.
T Consensus 42 ~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~ENPCc~~ 103 (388)
T KOG2123|consen 42 LLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLDENPCCGE 103 (388)
T ss_pred cceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhccCCcccc
Confidence 34444444444432221 3444445555555554432211 1234444555555555544444
No 495
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=94.46 E-value=0.022 Score=58.02 Aligned_cols=85 Identities=18% Similarity=0.286 Sum_probs=65.0
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCC------CCCcceEEEEEEeCCEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR------HTNIAELVGFCSEQGHN 478 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~------H~niv~l~g~~~~~~~~ 478 (495)
.|...-..|+|-|+.|.+|... .|+.||||.|+.... ..+.=+.|+++|.++. --+.++++-.|......
T Consensus 433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~---M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHL 509 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV---MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHL 509 (752)
T ss_pred eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH---HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhccee
Confidence 4555666899999999999874 488999999976432 2334467899999884 24678888888888999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
+||||-+. -+|.+.|
T Consensus 510 ClVFE~Ls-lNLRevL 524 (752)
T KOG0670|consen 510 CLVFEPLS-LNLREVL 524 (752)
T ss_pred EEEehhhh-chHHHHH
Confidence 99999764 4677665
No 496
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=93.58 E-value=0.19 Score=52.78 Aligned_cols=50 Identities=24% Similarity=0.412 Sum_probs=37.6
Q ss_pred CCCCcccHHHHHHhc------------cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCc
Q 040888 390 AQAAPFSMADLLTAT------------ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSS 440 (495)
Q Consensus 390 ~~~~~~~~~~~~~~t------------~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~ 440 (495)
++.++++++|+.+.. ..|+ .+.||.-+.|.||+|++++|+.||||+.+.+
T Consensus 135 D~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~-~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~ 196 (538)
T KOG1235|consen 135 DQAPPFPWEEAFKIFEEELGAPIEDIFSEFD-EEPIAAASLAQVHRARLKNGEDVAVKVQHPG 196 (538)
T ss_pred ccCCCCCHHHHHHHHHHHhCCCHHHHHHhcC-cchhhhcchhheEEEEecCCCEEEEEecCcC
Confidence 455666766664332 2343 4679999999999999999999999998764
No 497
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.43 E-value=0.006 Score=57.24 Aligned_cols=83 Identities=25% Similarity=0.337 Sum_probs=50.8
Q ss_pred CCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCc-ccccCCCCCCEEec
Q 040888 116 NLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELP-RSFASLSSLKKLYL 194 (495)
Q Consensus 116 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l 194 (495)
+.+.|+..++.|+.. .....|+.|++|.||-|+|+..-| +..+++|+.|.|..|.|...-- .-+.++++|+.|.|
T Consensus 20 ~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL 95 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWL 95 (388)
T ss_pred HhhhhcccCCCccHH--HHHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhh
Confidence 455666667666632 123456777777777777765433 5666777777777777653211 13456777777777
Q ss_pred cCCccccc
Q 040888 195 QNNQFTGS 202 (495)
Q Consensus 195 ~~N~l~g~ 202 (495)
..|.-.|.
T Consensus 96 ~ENPCc~~ 103 (388)
T KOG2123|consen 96 DENPCCGE 103 (388)
T ss_pred ccCCcccc
Confidence 77765543
No 498
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=93.40 E-value=0.033 Score=46.37 Aligned_cols=31 Identities=32% Similarity=0.409 Sum_probs=28.4
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEecCc
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSS 440 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~ 440 (495)
.+.|+.|+.|.||+|++++|+.||||+.+.+
T Consensus 16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~ 46 (119)
T PF03109_consen 16 PEPLASASIAQVHRARLKDGEEVAVKVQRPG 46 (119)
T ss_pred cchhhheehhhheeeeecccchhhhhhcchH
Confidence 4779999999999999999999999998765
No 499
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=92.73 E-value=0.072 Score=27.64 Aligned_cols=9 Identities=56% Similarity=0.870 Sum_probs=2.9
Q ss_pred cEEECcCCc
Q 040888 118 KHLDLSENQ 126 (495)
Q Consensus 118 ~~L~Ls~N~ 126 (495)
+.|+|++|+
T Consensus 4 ~~L~l~~n~ 12 (17)
T PF13504_consen 4 RTLDLSNNR 12 (17)
T ss_dssp SEEEETSS-
T ss_pred CEEECCCCC
Confidence 333333333
No 500
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=92.58 E-value=0.2 Score=51.50 Aligned_cols=73 Identities=22% Similarity=0.374 Sum_probs=53.1
Q ss_pred ceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe----CCEEEEEEEecCC-CCHh
Q 040888 418 IGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE----QGHNILIYDYYRN-GSLH 491 (495)
Q Consensus 418 ~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~ey~~~-GsL~ 491 (495)
-.+.||+.. .||..++.|+++..+... ...-..-++.++++.|.|+|++...+.. +...++||+|.|+ ++|.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~--~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQS--TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccC--cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 356799987 579999999995443211 2223445778999999999999998874 3467899999986 4554
Q ss_pred h
Q 040888 492 E 492 (495)
Q Consensus 492 ~ 492 (495)
+
T Consensus 367 d 367 (655)
T KOG3741|consen 367 D 367 (655)
T ss_pred H
Confidence 4
Done!