Query 040888
Match_columns 495
No_of_seqs 605 out of 4129
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 20:50:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040888.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040888hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogq_A PGIP-2, polygalacturona 100.0 3.4E-32 1.2E-36 267.9 14.3 209 24-233 2-221 (313)
2 3rgz_A Protein brassinosteroid 99.9 5.7E-28 2E-32 266.0 14.2 208 21-233 5-247 (768)
3 4ecn_A Leucine-rich repeat pro 99.9 5.1E-28 1.8E-32 266.4 10.2 205 23-233 264-595 (876)
4 4eco_A Uncharacterized protein 99.9 7.9E-28 2.7E-32 259.2 9.2 205 24-233 26-353 (636)
5 4fcg_A Uncharacterized protein 99.9 1.4E-26 4.8E-31 229.2 8.6 204 24-233 23-253 (328)
6 2o6s_A Variable lymphocyte rec 99.9 1.6E-23 5.3E-28 193.3 12.8 174 55-233 3-189 (208)
7 3rgz_A Protein brassinosteroid 99.9 2.6E-23 8.8E-28 228.9 13.9 70 164-233 633-704 (768)
8 2o6q_A Variable lymphocyte rec 99.9 2E-22 7E-27 193.6 18.5 163 70-232 38-204 (270)
9 1ogq_A PGIP-2, polygalacturona 99.9 2E-23 6.8E-28 205.2 10.2 165 69-233 76-268 (313)
10 3m19_A Variable lymphocyte rec 99.9 5.7E-22 1.9E-26 188.4 16.8 168 60-231 6-177 (251)
11 3m19_A Variable lymphocyte rec 99.9 9.1E-22 3.1E-26 187.0 17.9 166 60-225 15-195 (251)
12 4fcg_A Uncharacterized protein 99.9 5.9E-22 2E-26 196.0 14.9 161 69-233 104-277 (328)
13 1ozn_A Reticulon 4 receptor; N 99.9 4.7E-21 1.6E-25 185.5 18.5 165 69-233 32-201 (285)
14 1ozn_A Reticulon 4 receptor; N 99.9 9.6E-21 3.3E-25 183.3 17.4 165 69-233 56-225 (285)
15 1p9a_G Platelet glycoprotein I 99.9 9.1E-21 3.1E-25 184.0 17.0 162 69-232 31-194 (290)
16 2z66_A Variable lymphocyte rec 99.8 3.1E-21 1E-25 188.7 10.6 178 55-233 3-199 (306)
17 2v9t_B SLIT homolog 2 protein 99.8 2.4E-20 8.2E-25 173.5 15.2 157 54-223 6-166 (220)
18 3rfs_A Internalin B, repeat mo 99.8 5E-20 1.7E-24 177.1 17.9 156 69-226 63-222 (272)
19 2v70_A SLIT-2, SLIT homolog 2 99.8 1.8E-20 6.3E-25 174.3 14.1 151 73-226 15-170 (220)
20 2z62_A TOLL-like receptor 4, v 99.8 2E-20 6.8E-25 180.2 14.1 161 70-230 29-198 (276)
21 3e6j_A Variable lymphocyte rec 99.8 4.8E-20 1.7E-24 172.6 16.2 158 53-226 15-176 (229)
22 3rfs_A Internalin B, repeat mo 99.8 1.2E-19 4.2E-24 174.4 18.0 171 69-241 41-218 (272)
23 2id5_A Lingo-1, leucine rich r 99.8 5E-20 1.7E-24 191.5 14.8 174 60-233 12-200 (477)
24 3v47_A TOLL-like receptor 5B a 99.8 2.6E-20 8.9E-25 192.3 12.3 178 54-231 5-234 (455)
25 2z62_A TOLL-like receptor 4, v 99.8 7.3E-20 2.5E-24 176.2 14.6 174 69-242 52-238 (276)
26 2v70_A SLIT-2, SLIT homolog 2 99.8 1.7E-19 5.9E-24 167.7 16.1 150 54-203 6-169 (220)
27 3zyi_A Leucine-rich repeat-con 99.8 1.5E-19 5.2E-24 186.6 17.0 179 54-233 47-242 (452)
28 3zyj_A Leucine-rich repeat-con 99.8 1.1E-19 3.8E-24 187.0 15.0 180 60-241 44-268 (440)
29 2z66_A Variable lymphocyte rec 99.8 4.5E-20 1.5E-24 180.4 11.4 161 69-230 52-220 (306)
30 2ft3_A Biglycan; proteoglycan, 99.8 2.4E-19 8.2E-24 177.4 16.6 177 54-233 28-241 (332)
31 1xku_A Decorin; proteoglycan, 99.8 4.6E-19 1.6E-23 175.1 18.4 184 46-233 18-216 (330)
32 1w8a_A SLIT protein; signaling 99.8 8E-20 2.7E-24 166.2 11.7 129 72-203 11-142 (192)
33 2xot_A Amphoterin-induced prot 99.8 7.4E-20 2.5E-24 183.3 12.2 165 54-231 13-185 (361)
34 2o6q_A Variable lymphocyte rec 99.8 5.9E-19 2E-23 169.4 18.0 158 69-226 61-222 (270)
35 3v47_A TOLL-like receptor 5B a 99.8 3.5E-19 1.2E-23 183.8 16.2 103 139-241 275-384 (455)
36 2z80_A TOLL-like receptor 2, v 99.8 1.6E-19 5.4E-24 180.3 13.1 168 59-228 30-216 (353)
37 2xwt_C Thyrotropin receptor; s 99.8 1.4E-19 4.9E-24 170.4 11.4 176 55-232 6-203 (239)
38 3oja_B Anopheles plasmodium-re 99.8 3.2E-19 1.1E-23 190.7 15.6 131 71-201 53-185 (597)
39 1ziw_A TOLL-like receptor 3; i 99.8 2.7E-19 9.2E-24 194.2 15.1 177 57-233 2-195 (680)
40 1wwl_A Monocyte differentiatio 99.8 7.5E-20 2.6E-24 179.5 9.7 171 69-241 95-287 (312)
41 2v9t_B SLIT homolog 2 protein 99.8 5.4E-19 1.9E-23 164.3 15.0 133 69-201 32-166 (220)
42 4eco_A Uncharacterized protein 99.8 4E-20 1.4E-24 199.0 8.3 152 80-234 194-377 (636)
43 3e6j_A Variable lymphocyte rec 99.8 1.1E-18 3.8E-23 163.3 16.7 134 69-203 40-175 (229)
44 3vq2_A TLR4, TOLL-like recepto 99.8 2.9E-19 1E-23 191.3 14.1 159 69-227 32-199 (606)
45 2z81_A CD282 antigen, TOLL-lik 99.8 2.6E-19 8.8E-24 189.3 12.6 162 60-222 5-185 (549)
46 3t6q_A CD180 antigen; protein- 99.8 7E-19 2.4E-23 188.3 16.0 164 70-233 351-524 (606)
47 1wwl_A Monocyte differentiatio 99.8 2.5E-19 8.4E-24 175.8 11.4 170 68-241 120-309 (312)
48 3vq2_A TLR4, TOLL-like recepto 99.8 3.9E-19 1.3E-23 190.2 12.8 164 69-233 350-521 (606)
49 4g8a_A TOLL-like receptor 4; l 99.8 5.5E-19 1.9E-23 189.6 13.8 159 70-228 53-220 (635)
50 3zyi_A Leucine-rich repeat-con 99.8 1.1E-18 3.8E-23 180.2 15.5 171 69-241 99-279 (452)
51 1p9a_G Platelet glycoprotein I 99.8 3.4E-18 1.2E-22 165.9 17.3 154 68-224 54-210 (290)
52 3oja_A Leucine-rich immune mol 99.8 3.2E-19 1.1E-23 185.8 10.5 163 69-241 58-227 (487)
53 4ecn_A Leucine-rich repeat pro 99.8 2.3E-19 7.9E-24 197.6 9.9 147 85-234 440-619 (876)
54 3o6n_A APL1; leucine-rich repe 99.8 1.1E-18 3.7E-23 176.6 14.1 132 70-201 46-179 (390)
55 1xku_A Decorin; proteoglycan, 99.8 5.3E-18 1.8E-22 167.5 18.3 162 68-233 75-240 (330)
56 3t6q_A CD180 antigen; protein- 99.8 9.4E-19 3.2E-23 187.3 13.8 171 61-231 14-201 (606)
57 2xot_A Amphoterin-induced prot 99.8 1.9E-18 6.6E-23 173.0 15.1 156 69-224 39-204 (361)
58 3oja_B Anopheles plasmodium-re 99.8 4.2E-18 1.4E-22 182.0 18.4 108 69-176 75-184 (597)
59 4ezg_A Putative uncharacterize 99.8 1.1E-18 3.9E-23 159.2 11.8 151 69-223 44-195 (197)
60 2o6s_A Variable lymphocyte rec 99.8 7.9E-18 2.7E-22 154.9 17.4 152 72-226 10-165 (208)
61 1w8a_A SLIT protein; signaling 99.8 3E-18 1E-22 155.8 13.4 130 96-226 11-143 (192)
62 3cvr_A Invasion plasmid antige 99.8 1.4E-18 4.9E-23 183.1 12.6 167 47-233 34-230 (571)
63 4b8c_D Glucose-repressible alc 99.8 5E-20 1.7E-24 200.7 1.3 200 27-232 131-364 (727)
64 3j0a_A TOLL-like receptor 5; m 99.8 1.1E-18 3.9E-23 193.8 11.0 169 60-228 15-193 (844)
65 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 4.7E-18 1.6E-22 180.3 14.8 162 70-233 277-473 (562)
66 3o6n_A APL1; leucine-rich repe 99.8 1.5E-17 5.2E-22 168.1 17.7 106 70-175 70-177 (390)
67 4glp_A Monocyte differentiatio 99.8 1.1E-18 3.8E-23 171.0 8.9 171 69-241 91-285 (310)
68 1ziw_A TOLL-like receptor 3; i 99.8 1.2E-17 4E-22 181.3 17.6 175 69-243 405-624 (680)
69 2z7x_B TOLL-like receptor 1, v 99.8 4.1E-18 1.4E-22 178.9 13.6 169 69-241 247-457 (520)
70 2id5_A Lingo-1, leucine rich r 99.7 5.8E-18 2E-22 175.9 14.2 152 69-220 56-211 (477)
71 3j0a_A TOLL-like receptor 5; m 99.7 4.7E-18 1.6E-22 188.8 14.4 83 160-242 477-561 (844)
72 2o6r_A Variable lymphocyte rec 99.7 1.6E-17 5.5E-22 148.7 13.5 135 55-202 3-139 (177)
73 4g8a_A TOLL-like receptor 4; l 99.7 1.2E-17 4.1E-22 179.1 14.8 152 79-233 41-197 (635)
74 2z63_A TOLL-like receptor 4, v 99.7 9.2E-18 3.1E-22 178.1 13.5 163 69-231 28-199 (570)
75 2z80_A TOLL-like receptor 2, v 99.7 2.3E-18 7.7E-23 171.9 8.3 159 69-227 76-240 (353)
76 2z7x_B TOLL-like receptor 1, v 99.7 7.1E-18 2.4E-22 177.1 11.7 149 70-222 303-457 (520)
77 2z63_A TOLL-like receptor 4, v 99.7 7E-18 2.4E-22 179.0 11.7 173 69-242 347-532 (570)
78 2ft3_A Biglycan; proteoglycan, 99.7 2.4E-17 8.1E-22 163.0 14.5 158 69-229 123-284 (332)
79 3o53_A Protein LRIM1, AGAP0063 99.7 3.9E-18 1.3E-22 167.6 8.7 164 68-241 57-227 (317)
80 2xwt_C Thyrotropin receptor; s 99.7 5.8E-18 2E-22 159.3 9.4 162 69-233 55-229 (239)
81 4glp_A Monocyte differentiatio 99.7 6.7E-18 2.3E-22 165.4 9.6 173 68-241 116-307 (310)
82 2wfh_A SLIT homolog 2 protein 99.7 4.6E-17 1.6E-21 148.0 14.4 124 98-223 15-140 (193)
83 3oja_A Leucine-rich immune mol 99.7 6.6E-18 2.3E-22 175.9 9.8 166 68-242 79-251 (487)
84 1h6u_A Internalin H; cell adhe 99.7 6.2E-17 2.1E-21 158.4 16.2 148 69-225 63-211 (308)
85 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 1.3E-17 4.4E-22 177.0 12.2 155 69-226 353-514 (562)
86 3cvr_A Invasion plasmid antige 99.7 1.9E-17 6.5E-22 174.5 13.3 147 69-233 100-254 (571)
87 3zyj_A Leucine-rich repeat-con 99.7 3.3E-17 1.1E-21 168.4 14.9 173 69-243 112-294 (440)
88 2o6r_A Variable lymphocyte rec 99.7 6.2E-17 2.1E-21 144.9 14.1 131 95-226 9-141 (177)
89 2z81_A CD282 antigen, TOLL-lik 99.7 4.1E-17 1.4E-21 172.4 15.1 164 65-233 3-172 (549)
90 1h6t_A Internalin B; cell adhe 99.7 8E-17 2.7E-21 156.2 15.0 146 69-223 68-214 (291)
91 2je0_A Acidic leucine-rich nuc 99.7 2.5E-17 8.4E-22 143.1 9.9 126 69-196 17-149 (149)
92 2ell_A Acidic leucine-rich nuc 99.7 3.5E-17 1.2E-21 145.2 10.8 131 69-201 24-161 (168)
93 1h6u_A Internalin H; cell adhe 99.7 1.5E-16 5E-21 155.7 15.1 147 68-223 84-231 (308)
94 3o53_A Protein LRIM1, AGAP0063 99.7 2.9E-17 9.9E-22 161.4 10.1 156 68-232 79-236 (317)
95 2ell_A Acidic leucine-rich nuc 99.7 9.1E-17 3.1E-21 142.5 12.2 132 90-223 21-161 (168)
96 2wfh_A SLIT homolog 2 protein 99.7 1E-16 3.5E-21 145.7 12.6 125 73-201 14-140 (193)
97 1m9s_A Internalin B; cell inva 99.7 1.7E-16 5.8E-21 168.9 15.8 148 68-226 64-214 (605)
98 1h6t_A Internalin B; cell adhe 99.7 3.4E-16 1.1E-20 151.8 16.2 154 69-233 46-200 (291)
99 1o6v_A Internalin A; bacterial 99.7 3E-16 1E-20 162.5 15.8 146 69-223 199-345 (466)
100 4asz_A BDNF/NT-3 growth factor 99.7 3.1E-17 1.1E-21 159.2 7.6 89 405-495 13-107 (299)
101 4aoj_A High affinity nerve gro 99.7 4.1E-17 1.4E-21 160.6 8.0 89 405-495 41-135 (329)
102 2je0_A Acidic leucine-rich nuc 99.7 8.6E-17 3E-21 139.7 9.0 124 92-217 16-148 (149)
103 4gt4_A Tyrosine-protein kinase 99.7 4.4E-17 1.5E-21 158.8 7.3 87 407-494 28-120 (308)
104 1xeu_A Internalin C; cellular 99.7 4.2E-16 1.4E-20 148.9 13.8 147 69-225 41-188 (263)
105 1o6v_A Internalin A; bacterial 99.7 3.4E-16 1.2E-20 162.1 14.1 163 69-242 221-389 (466)
106 1m9s_A Internalin B; cell inva 99.7 4.8E-16 1.6E-20 165.4 14.7 154 69-233 43-197 (605)
107 4fmz_A Internalin; leucine ric 99.7 9.7E-16 3.3E-20 152.2 15.5 156 69-233 155-311 (347)
108 1jl5_A Outer protein YOPM; leu 99.7 1.4E-15 4.7E-20 156.9 16.7 158 69-241 131-290 (454)
109 4b9d_A Serine/threonine-protei 99.6 1.9E-16 6.5E-21 156.3 9.3 90 405-494 24-114 (350)
110 4fmz_A Internalin; leucine ric 99.6 6.9E-16 2.4E-20 153.2 13.3 156 68-233 176-333 (347)
111 3bz5_A Internalin-J, INLJ; leu 99.6 2.8E-15 9.4E-20 154.7 17.3 141 70-224 65-206 (457)
112 3g39_A Variable lymphocyte rec 99.6 1.2E-15 4E-20 135.7 12.6 107 96-203 12-118 (170)
113 3bz5_A Internalin-J, INLJ; leu 99.6 3.1E-15 1.1E-19 154.3 17.1 142 68-223 84-226 (457)
114 4ay9_X Follicle-stimulating ho 99.6 6.9E-16 2.4E-20 153.7 11.6 177 57-233 7-202 (350)
115 2ca6_A RAN GTPase-activating p 99.6 3.3E-17 1.1E-21 165.5 0.7 161 69-229 94-298 (386)
116 4ezg_A Putative uncharacterize 99.6 1.3E-15 4.3E-20 138.9 11.1 128 69-201 66-195 (197)
117 3omv_A RAF proto-oncogene seri 99.6 4.3E-16 1.5E-20 151.4 8.4 89 404-495 35-123 (307)
118 2r9u_A Variable lymphocyte rec 99.6 3E-15 1E-19 133.6 12.7 107 96-203 15-121 (174)
119 2ast_B S-phase kinase-associat 99.6 1.3E-16 4.6E-21 157.6 3.6 164 69-233 70-247 (336)
120 1a9n_A U2A', U2A'; complex (nu 99.6 9.1E-16 3.1E-20 137.2 8.3 131 88-222 14-153 (176)
121 2ast_B S-phase kinase-associat 99.6 1.6E-16 5.5E-21 157.0 2.3 152 69-220 93-258 (336)
122 1jl5_A Outer protein YOPM; leu 99.6 1.3E-14 4.3E-19 149.6 16.5 147 69-233 91-237 (454)
123 3fpq_A Serine/threonine-protei 99.6 1.6E-15 5.4E-20 146.3 9.1 86 409-494 30-120 (290)
124 2ca6_A RAN GTPase-activating p 99.6 2.1E-16 7.1E-21 159.6 2.6 165 69-233 32-244 (386)
125 4fih_A Serine/threonine-protei 99.6 1.4E-15 4.8E-20 149.8 8.0 88 405-494 74-162 (346)
126 4aw0_A HPDK1, 3-phosphoinositi 99.6 1.1E-15 3.7E-20 148.4 6.9 90 405-494 32-123 (311)
127 1ds9_A Outer arm dynein; leuci 99.6 1.2E-17 4.1E-22 152.5 -7.6 130 69-203 18-156 (198)
128 1xeu_A Internalin C; cellular 99.6 1.5E-14 5.2E-19 138.0 13.6 127 68-203 62-188 (263)
129 4b8c_D Glucose-repressible alc 99.6 2.4E-15 8.2E-20 163.8 8.7 138 92-232 190-339 (727)
130 4fie_A Serine/threonine-protei 99.6 3.3E-15 1.1E-19 150.9 8.8 89 404-494 150-239 (423)
131 3g06_A SSPH2 (leucine-rich rep 99.6 1.4E-14 4.7E-19 154.4 13.8 87 139-233 221-308 (622)
132 3g06_A SSPH2 (leucine-rich rep 99.6 3.4E-14 1.2E-18 151.4 16.5 71 163-241 221-297 (622)
133 3hmm_A TGF-beta receptor type- 99.6 2.8E-15 9.6E-20 146.1 7.5 86 406-495 4-93 (303)
134 1dce_A Protein (RAB geranylger 99.6 1.7E-14 5.8E-19 152.5 13.1 141 81-227 397-551 (567)
135 1dce_A Protein (RAB geranylger 99.6 1E-14 3.5E-19 154.2 11.4 118 94-216 442-567 (567)
136 1a9n_A U2A', U2A'; complex (nu 99.6 8.2E-15 2.8E-19 130.9 9.1 128 69-202 19-155 (176)
137 3ubd_A Ribosomal protein S6 ki 99.5 1.5E-15 5.1E-20 147.3 3.6 90 405-494 24-117 (304)
138 4g31_A Eukaryotic translation 99.5 6.5E-15 2.2E-19 143.0 8.1 89 405-494 5-106 (299)
139 3goz_A Leucine-rich repeat-con 99.5 1.2E-15 4.3E-20 152.6 2.7 154 70-223 23-210 (362)
140 3goz_A Leucine-rich repeat-con 99.5 1.4E-15 4.6E-20 152.3 2.6 159 73-231 2-189 (362)
141 3hyh_A Carbon catabolite-derep 99.5 1.7E-14 5.9E-19 137.8 9.4 89 405-494 13-103 (275)
142 4ase_A Vascular endothelial gr 99.5 7E-15 2.4E-19 145.9 6.5 100 395-495 54-161 (353)
143 4g3f_A NF-kappa-beta-inducing 99.5 9.2E-15 3.1E-19 143.5 7.0 85 404-495 57-142 (336)
144 3g39_A Variable lymphocyte rec 99.5 1E-13 3.5E-18 123.1 12.4 106 72-180 12-119 (170)
145 2r9u_A Variable lymphocyte rec 99.5 2E-13 6.9E-18 121.6 12.5 104 72-178 15-120 (174)
146 1ds9_A Outer arm dynein; leuci 99.5 2.1E-16 7.2E-21 144.2 -7.8 134 89-227 14-158 (198)
147 1z7x_W Ribonuclease inhibitor; 99.4 1E-14 3.5E-19 150.4 0.5 87 115-201 256-355 (461)
148 1z7x_W Ribonuclease inhibitor; 99.4 1.4E-14 4.6E-19 149.5 0.8 164 70-233 86-284 (461)
149 4b99_A Mitogen-activated prote 99.4 1.4E-13 4.9E-18 138.8 8.2 90 405-495 54-150 (398)
150 3uto_A Twitchin; kinase, muscl 99.4 3.3E-13 1.1E-17 142.7 9.7 89 404-494 156-245 (573)
151 3uim_A Brassinosteroid insensi 99.4 1.5E-13 5.2E-18 135.0 6.6 102 392-494 17-118 (326)
152 4ay9_X Follicle-stimulating ho 99.4 4E-13 1.4E-17 133.6 9.4 165 68-233 53-226 (350)
153 2qkw_B Protein kinase; three-h 99.4 1.9E-13 6.5E-18 134.1 6.7 98 395-494 29-126 (321)
154 2ifg_A High affinity nerve gro 99.4 8.5E-13 2.9E-17 131.0 11.2 85 116-201 32-117 (347)
155 2c30_A Serine/threonine-protei 99.4 1E-12 3.5E-17 129.0 11.2 101 393-495 23-134 (321)
156 4f9c_A Cell division cycle 7-r 99.4 7.9E-13 2.7E-17 131.8 9.5 92 400-495 16-112 (361)
157 2nru_A Interleukin-1 receptor- 99.4 1.7E-12 5.7E-17 126.4 11.3 102 392-494 12-121 (307)
158 2ifg_A High affinity nerve gro 99.4 1.2E-12 4.1E-17 129.9 10.5 105 119-225 12-119 (347)
159 3fe3_A MAP/microtubule affinit 99.4 1.3E-12 4.3E-17 128.8 9.2 92 403-494 13-105 (328)
160 3un9_A NLR family member X1; l 99.3 3.4E-14 1.2E-18 142.3 -3.0 163 69-231 72-261 (372)
161 3v5w_A G-protein coupled recep 99.3 1.9E-12 6.6E-17 137.0 8.8 91 404-494 188-283 (689)
162 3p86_A Serine/threonine-protei 99.3 1.1E-12 3.9E-17 128.0 6.4 92 402-494 34-125 (309)
163 3s95_A LIMK-1, LIM domain kina 99.3 3.9E-12 1.3E-16 124.0 10.1 88 405-494 10-98 (310)
164 4aw2_A Serine/threonine-protei 99.3 9.9E-13 3.4E-17 134.6 5.7 99 396-494 65-165 (437)
165 3uqc_A Probable conserved tran 99.3 3.8E-12 1.3E-16 122.8 9.5 91 405-495 31-123 (286)
166 3fxz_A Serine/threonine-protei 99.3 7.9E-12 2.7E-16 121.2 11.5 89 404-494 19-108 (297)
167 2qol_A Ephrin receptor; recept 99.3 1.9E-12 6.4E-17 129.9 6.7 89 405-494 45-137 (373)
168 4hcu_A Tyrosine-protein kinase 99.3 4.6E-12 1.6E-16 120.8 9.1 87 405-494 10-96 (269)
169 3qd2_B Eukaryotic translation 99.3 4.7E-12 1.6E-16 124.3 9.2 71 405-476 6-77 (332)
170 3v8s_A RHO-associated protein 99.3 1.6E-12 5.4E-17 131.9 5.8 98 397-494 61-160 (410)
171 2bdw_A Hypothetical protein K1 99.3 4.1E-12 1.4E-16 126.9 8.7 91 404-494 28-119 (362)
172 3kmu_A ILK, integrin-linked ki 99.3 1.6E-12 5.3E-17 123.9 5.3 89 405-494 10-100 (271)
173 3zgw_A Maternal embryonic leuc 99.3 5.8E-12 2E-16 125.0 9.5 90 404-494 9-99 (347)
174 2yab_A Death-associated protei 99.3 8.1E-12 2.8E-16 124.7 10.4 91 404-494 11-106 (361)
175 1qcf_A Haematopoetic cell kina 99.3 3E-12 1E-16 131.9 7.2 93 399-495 182-274 (454)
176 2vd5_A DMPK protein; serine/th 99.3 2.2E-12 7.6E-17 130.9 6.0 100 395-494 51-152 (412)
177 3gni_B Strad alpha; kinase fol 99.3 7.8E-12 2.7E-16 126.1 9.8 90 405-494 25-117 (389)
178 3c0i_A Peripheral plasma membr 99.3 6.4E-12 2.2E-16 124.9 8.7 90 405-494 24-117 (351)
179 3hko_A Calcium/calmodulin-depe 99.3 5.9E-12 2E-16 124.6 8.4 94 401-494 22-119 (345)
180 3cbl_A C-FES, proto-oncogene t 99.3 2.5E-12 8.4E-17 129.3 5.1 90 404-494 113-203 (377)
181 2psq_A Fibroblast growth facto 99.3 4.4E-12 1.5E-16 127.1 6.9 90 404-494 80-178 (370)
182 2y0a_A Death-associated protei 99.3 1.3E-11 4.5E-16 121.4 10.1 91 405-495 11-106 (326)
183 1fmk_A C-SRC, P60-SRC, tyrosin 99.3 4.5E-12 1.5E-16 130.6 7.0 91 401-495 180-270 (452)
184 3sxs_A Cytoplasmic tyrosine-pr 99.3 8.6E-12 2.9E-16 118.7 8.4 88 404-494 7-94 (268)
185 1tki_A Titin; serine kinase, m 99.3 1.4E-11 4.7E-16 120.9 10.2 89 404-495 4-93 (321)
186 1x8b_A WEE1HU, WEE1-like prote 99.3 1.2E-11 4.1E-16 118.7 9.4 91 404-494 10-102 (289)
187 1o6l_A RAC-beta serine/threoni 99.3 1.1E-11 3.8E-16 122.5 9.3 90 405-494 5-96 (337)
188 3gen_A Tyrosine-protein kinase 99.2 9.6E-12 3.3E-16 119.4 8.6 88 404-494 23-110 (283)
189 3kul_A Ephrin type-A receptor 99.2 6.4E-12 2.2E-16 123.5 7.5 89 405-494 49-141 (325)
190 3tki_A Serine/threonine-protei 99.2 7.4E-12 2.5E-16 123.0 7.9 89 405-494 7-96 (323)
191 4eqm_A Protein kinase; transfe 99.2 1.6E-11 5.5E-16 118.8 9.8 90 405-494 11-102 (294)
192 1luf_A Muscle-specific tyrosin 99.2 5.2E-12 1.8E-16 124.8 6.5 95 399-494 41-141 (343)
193 3niz_A Rhodanese family protei 99.2 9.1E-12 3.1E-16 121.6 8.0 90 404-494 20-109 (311)
194 3vhe_A Vascular endothelial gr 99.2 3.9E-12 1.3E-16 126.6 5.3 100 395-495 12-119 (359)
195 3kk8_A Calcium/calmodulin depe 99.2 1.6E-11 5.5E-16 117.8 9.5 91 404-494 5-96 (284)
196 1opk_A P150, C-ABL, proto-onco 99.2 5.2E-12 1.8E-16 131.5 6.3 89 403-494 218-307 (495)
197 3soa_A Calcium/calmodulin-depe 99.2 8.4E-12 2.9E-16 128.0 7.5 91 404-494 10-101 (444)
198 4euu_A Serine/threonine-protei 99.2 2E-11 6.9E-16 119.4 10.0 89 405-494 9-100 (319)
199 1k9a_A Carboxyl-terminal SRC k 99.2 1.3E-11 4.5E-16 126.9 8.9 87 403-494 191-278 (450)
200 2h8h_A Proto-oncogene tyrosine 99.2 6E-12 2.1E-16 132.3 6.4 92 400-495 262-353 (535)
201 3is5_A Calcium-dependent prote 99.2 1.9E-11 6.6E-16 117.6 9.4 89 405-494 22-111 (285)
202 2x4f_A Myosin light chain kina 99.2 1.3E-11 4.5E-16 123.7 8.5 85 408-494 92-177 (373)
203 4agu_A Cyclin-dependent kinase 99.2 1.6E-11 5.6E-16 119.5 8.8 90 405-494 3-93 (311)
204 3uc3_A Serine/threonine-protei 99.2 2.2E-11 7.4E-16 121.6 9.8 88 404-494 19-107 (361)
205 2w4o_A Calcium/calmodulin-depe 99.2 1.5E-11 5.1E-16 122.2 8.5 88 403-494 51-139 (349)
206 2w5a_A Serine/threonine-protei 99.2 2.1E-11 7.1E-16 116.7 9.2 91 404-494 5-98 (279)
207 1ob3_A PFPK5, cell division co 99.2 1.5E-11 5.2E-16 118.5 8.2 89 405-494 2-90 (288)
208 1fot_A TPK1 delta, CAMP-depend 99.2 1.6E-11 5.5E-16 120.3 8.4 90 405-494 6-97 (318)
209 1kob_A Twitchin; kinase, intra 99.2 2.6E-11 8.8E-16 122.2 10.0 90 404-495 50-140 (387)
210 3lij_A Calcium/calmodulin depe 99.2 2.1E-11 7.2E-16 127.0 9.3 90 405-494 37-127 (494)
211 3a62_A Ribosomal protein S6 ki 99.2 1.5E-11 5E-16 121.0 7.7 90 405-494 17-112 (327)
212 3t9t_A Tyrosine-protein kinase 99.2 1.4E-11 4.8E-16 117.1 7.2 87 405-494 8-94 (267)
213 3l9p_A Anaplastic lymphoma kin 99.2 8.8E-12 3E-16 124.7 6.0 90 404-494 70-165 (367)
214 4fr4_A YANK1, serine/threonine 99.2 1.3E-11 4.5E-16 124.0 7.3 90 405-494 15-106 (384)
215 3soc_A Activin receptor type-2 99.2 1.4E-11 4.9E-16 120.8 7.3 87 404-494 23-113 (322)
216 2pmi_A Negative RE, cyclin-dep 99.2 2.8E-11 9.7E-16 118.4 9.4 89 404-494 4-93 (317)
217 3qup_A Tyrosine-protein kinase 99.2 1.1E-11 3.8E-16 121.4 6.4 94 401-494 19-122 (323)
218 1rdq_E PKA C-alpha, CAMP-depen 99.2 2.7E-11 9.3E-16 120.3 9.1 90 405-494 41-132 (350)
219 3q5i_A Protein kinase; CDPK, m 99.2 4E-11 1.4E-15 125.2 10.8 91 404-494 35-137 (504)
220 3bhy_A Death-associated protei 99.2 3.8E-11 1.3E-15 115.2 9.7 90 405-494 5-99 (283)
221 3f3z_A Calcium/calmodulin-depe 99.2 3.4E-11 1.2E-15 115.2 9.3 88 405-494 9-97 (277)
222 1qpc_A LCK kinase; alpha beta 99.2 1.6E-11 5.4E-16 117.6 6.9 88 404-495 12-99 (279)
223 3a8x_A Protein kinase C IOTA t 99.2 3.2E-11 1.1E-15 119.6 9.3 90 405-494 9-101 (345)
224 4eut_A Serine/threonine-protei 99.2 2.8E-11 9.4E-16 122.4 9.0 90 405-495 9-101 (396)
225 3o0g_A Cell division protein k 99.2 3.8E-11 1.3E-15 115.9 9.5 88 405-493 2-90 (292)
226 2zv2_A Calcium/calmodulin-depe 99.2 2.4E-11 8.1E-16 117.7 8.0 91 404-494 12-129 (298)
227 3txo_A PKC-L, NPKC-ETA, protei 99.2 2.4E-11 8.2E-16 120.9 8.2 91 404-494 22-115 (353)
228 3mwu_A Calmodulin-domain prote 99.2 2.4E-11 8.1E-16 126.3 8.4 90 405-494 22-112 (486)
229 3eqc_A Dual specificity mitoge 99.2 2.4E-11 8.3E-16 121.0 8.2 89 405-494 33-122 (360)
230 1p4o_A Insulin-like growth fac 99.2 7.3E-12 2.5E-16 122.6 4.2 96 398-494 18-119 (322)
231 2wqm_A Serine/threonine-protei 99.2 5.9E-11 2E-15 115.5 10.7 91 404-494 31-123 (310)
232 4fvq_A Tyrosine-protein kinase 99.2 1.8E-11 6.2E-16 117.8 6.9 88 405-494 8-103 (289)
233 2ac3_A MAP kinase-interacting 99.2 8.5E-11 2.9E-15 114.7 11.8 87 406-494 13-102 (316)
234 2ivs_A Proto-oncogene tyrosine 99.2 1.6E-11 5.5E-16 119.6 6.6 90 404-494 22-117 (314)
235 1t4h_A Serine/threonine-protei 99.2 5.3E-11 1.8E-15 114.7 10.1 88 407-494 28-120 (290)
236 3fdn_A Serine/threonine-protei 99.2 2.5E-11 8.6E-16 116.3 7.8 91 404-494 8-100 (279)
237 2a2a_A Death-associated protei 99.2 4E-11 1.4E-15 117.5 9.4 90 405-494 12-106 (321)
238 3p1a_A MYT1 kinase, membrane-a 99.2 1.8E-11 6.2E-16 119.5 6.8 89 405-494 57-147 (311)
239 2y94_A 5'-AMP-activated protei 99.2 2.8E-11 9.5E-16 125.1 8.4 91 405-495 16-108 (476)
240 2clq_A Mitogen-activated prote 99.2 7E-11 2.4E-15 114.0 10.7 87 406-494 23-110 (295)
241 1xjd_A Protein kinase C, theta 99.2 3.1E-11 1.1E-15 119.6 8.3 92 403-494 15-109 (345)
242 2yex_A Serine/threonine-protei 99.2 4.1E-11 1.4E-15 114.4 8.9 89 405-494 7-96 (276)
243 3gbz_A Kinase, CMGC CDK; ssgci 99.2 2.7E-11 9.2E-16 119.2 7.7 91 403-494 32-123 (329)
244 3kfa_A Tyrosine-protein kinase 99.2 1.1E-11 3.6E-16 119.4 4.6 89 403-494 11-100 (288)
245 3dtc_A Mitogen-activated prote 99.2 2.5E-11 8.6E-16 115.6 7.2 89 405-494 7-97 (271)
246 3gxj_A TGF-beta receptor type- 99.2 5.7E-11 1.9E-15 115.0 9.7 84 405-494 3-92 (303)
247 2wei_A Calmodulin-domain prote 99.2 4.7E-11 1.6E-15 114.9 9.1 91 404-494 21-112 (287)
248 4dc2_A Protein kinase C IOTA t 99.2 2.7E-11 9.4E-16 122.2 7.7 91 404-494 51-144 (396)
249 3ugc_A Tyrosine-protein kinase 99.2 2.1E-11 7.1E-16 117.9 6.4 88 405-494 10-104 (295)
250 3cok_A Serine/threonine-protei 99.2 4E-11 1.4E-15 114.8 8.3 91 404-494 10-102 (278)
251 2h6d_A 5'-AMP-activated protei 99.2 6.1E-11 2.1E-15 113.3 9.5 90 405-494 11-102 (276)
252 4e5w_A Tyrosine-protein kinase 99.2 6.4E-11 2.2E-15 114.7 9.7 88 406-494 22-116 (302)
253 3a7i_A MST3 kinase, serine/thr 99.2 7.6E-11 2.6E-15 114.3 10.2 90 405-495 22-112 (303)
254 2pvf_A Fibroblast growth facto 99.2 3.1E-11 1.1E-15 119.0 7.3 90 404-494 34-132 (334)
255 1t46_A HOMO sapiens V-KIT hard 99.2 1.9E-11 6.5E-16 119.0 5.6 90 404-494 22-118 (313)
256 2pml_X PFPK7, Ser/Thr protein 99.2 2.2E-11 7.5E-16 120.6 6.1 89 404-493 30-133 (348)
257 3kn6_A Ribosomal protein S6 ki 99.2 8.8E-11 3E-15 115.4 10.2 80 410-494 16-97 (325)
258 2jam_A Calcium/calmodulin-depe 99.2 6E-11 2.1E-15 115.2 8.9 88 405-494 9-97 (304)
259 2acx_A G protein-coupled recep 99.2 4.1E-11 1.4E-15 126.0 8.2 91 404-494 183-275 (576)
260 3tt0_A Basic fibroblast growth 99.2 3.1E-11 1E-15 121.4 6.9 90 404-494 68-166 (382)
261 2h34_A Serine/threonine-protei 99.2 8E-11 2.7E-15 114.7 9.7 91 404-494 33-125 (309)
262 2j7t_A Serine/threonine-protei 99.2 6.7E-11 2.3E-15 114.6 9.1 89 404-494 18-107 (302)
263 3i6u_A CDS1, serine/threonine- 99.2 6.9E-11 2.4E-15 120.4 9.6 91 403-494 133-230 (419)
264 4aaa_A Cyclin-dependent kinase 99.1 4.6E-11 1.6E-15 117.5 8.0 89 405-493 25-114 (331)
265 2rku_A Serine/threonine-protei 99.1 7.6E-11 2.6E-15 113.8 9.4 90 405-494 15-106 (294)
266 2r3i_A Cell division protein k 99.1 7.6E-11 2.6E-15 114.0 9.3 89 405-494 3-92 (299)
267 3ork_A Serine/threonine protei 99.1 1.5E-11 5.3E-16 119.9 4.4 90 405-494 12-107 (311)
268 1rjb_A FL cytokine receptor; k 99.1 2.5E-11 8.4E-16 120.1 5.9 92 402-494 42-140 (344)
269 3h4j_B AMPK kdaid, SNF1-like p 99.1 3.9E-11 1.3E-15 118.4 7.3 90 404-494 8-99 (336)
270 3lxp_A Non-receptor tyrosine-p 99.1 9.6E-11 3.3E-15 114.6 9.7 87 407-494 33-126 (318)
271 4f0f_A Serine/threonine-protei 99.1 7.8E-11 2.7E-15 113.3 8.8 88 405-494 19-112 (287)
272 2eva_A TAK1 kinase - TAB1 chim 99.1 2.8E-11 9.5E-16 117.9 5.5 83 405-494 8-90 (307)
273 2vgo_A Serine/threonine-protei 99.1 5.9E-11 2E-15 114.0 7.7 90 405-494 14-105 (284)
274 3nyv_A Calmodulin-domain prote 99.1 7.4E-11 2.5E-15 122.5 9.0 90 405-494 26-117 (484)
275 3c4z_A Rhodopsin kinase; Ser/T 99.1 6.3E-11 2.2E-15 124.1 8.4 91 404-494 184-276 (543)
276 2yfx_A Tyrosine-protein kinase 99.1 3.7E-11 1.3E-15 118.0 6.3 90 404-494 29-124 (327)
277 4ejn_A RAC-alpha serine/threon 99.1 2.6E-11 8.8E-16 124.6 5.4 91 404-494 147-239 (446)
278 1phk_A Phosphorylase kinase; g 99.1 9.2E-11 3.2E-15 113.3 9.0 91 404-494 16-115 (298)
279 2owb_A Serine/threonine-protei 99.1 8.8E-11 3E-15 115.8 9.0 91 404-494 40-132 (335)
280 1xbb_A Tyrosine-protein kinase 99.1 4.7E-11 1.6E-15 115.2 6.8 89 405-494 16-108 (291)
281 2i0e_A Protein kinase C-beta I 99.1 6.7E-11 2.3E-15 117.6 8.1 91 404-494 19-112 (353)
282 3lxl_A Tyrosine-protein kinase 99.1 1E-10 3.5E-15 114.8 9.3 88 405-494 23-117 (327)
283 4fl3_A Tyrosine-protein kinase 99.1 8.9E-11 3E-15 125.8 9.5 83 411-494 375-460 (635)
284 2x7f_A TRAF2 and NCK-interacti 99.1 4.5E-11 1.6E-15 117.1 6.6 97 395-494 14-118 (326)
285 2vwi_A Serine/threonine-protei 99.1 3.3E-11 1.1E-15 116.6 5.6 90 404-494 14-104 (303)
286 3brb_A Proto-oncogene tyrosine 99.1 3.3E-11 1.1E-15 117.5 5.5 95 400-494 29-132 (313)
287 2ozo_A Tyrosine-protein kinase 99.1 7.9E-11 2.7E-15 125.8 8.9 82 412-495 343-427 (613)
288 1zy4_A Serine/threonine-protei 99.1 7E-11 2.4E-15 114.2 7.7 88 404-494 5-106 (303)
289 2r5t_A Serine/threonine-protei 99.1 4.7E-11 1.6E-15 119.7 6.6 91 404-494 37-130 (373)
290 3q4u_A Activin receptor type-1 99.1 1.2E-10 4.1E-15 112.6 9.3 86 404-495 7-98 (301)
291 3lm5_A Serine/threonine-protei 99.1 8.4E-11 2.9E-15 115.5 8.3 91 404-494 27-120 (327)
292 2eue_A Carbon catabolite derep 99.1 1.5E-10 5.2E-15 110.5 9.8 89 405-494 13-103 (275)
293 3com_A Serine/threonine-protei 99.1 1.3E-10 4.3E-15 113.3 9.4 87 404-494 28-115 (314)
294 1u5q_A Serine/threonine protei 99.1 1.1E-10 3.6E-15 116.0 8.9 89 405-494 54-144 (348)
295 1u59_A Tyrosine-protein kinase 99.1 1.2E-10 4E-15 112.1 8.9 86 407-494 11-100 (287)
296 2i1m_A Macrophage colony-stimu 99.1 5.1E-11 1.7E-15 117.2 6.3 92 402-494 43-141 (333)
297 3e7e_A HBUB1, BUB1A, mitotic c 99.1 7.3E-11 2.5E-15 117.8 7.4 87 403-494 63-158 (365)
298 1fvr_A Tyrosine-protein kinase 99.1 8.9E-11 3.1E-15 115.2 7.9 89 405-494 25-117 (327)
299 2xir_A Vascular endothelial gr 99.1 6.3E-11 2.2E-15 115.4 6.7 98 396-494 18-123 (316)
300 1mp8_A Focal adhesion kinase 1 99.1 4.2E-11 1.4E-15 114.9 5.3 89 404-494 14-106 (281)
301 1mqb_A Ephrin type-A receptor 99.1 8E-11 2.7E-15 116.0 7.4 89 405-494 44-137 (333)
302 3pg1_A Mitogen-activated prote 99.1 7.6E-11 2.6E-15 117.4 7.3 98 396-494 13-124 (362)
303 2buj_A Serine/threonine-protei 99.1 8.2E-11 2.8E-15 114.8 7.3 89 404-494 28-121 (317)
304 2y7j_A Phosphorylase B kinase 99.1 1.8E-10 6.3E-15 115.0 9.9 94 401-494 90-191 (365)
305 1vzo_A Ribosomal protein S6 ki 99.1 6.3E-11 2.2E-15 117.9 6.3 91 404-494 53-150 (355)
306 2ycf_A Serine/threonine-protei 99.1 8E-11 2.7E-15 115.3 6.9 89 405-494 10-105 (322)
307 3dbq_A Dual specificity protei 99.1 1.3E-10 4.5E-15 114.9 8.6 89 405-494 9-99 (343)
308 3og7_A AKAP9-BRAF fusion prote 99.1 1.1E-10 3.8E-15 112.4 7.8 87 405-494 24-110 (289)
309 2qr7_A Ribosomal protein S6 ki 99.1 5.4E-11 1.8E-15 117.8 5.7 85 404-494 21-107 (342)
310 3lb7_A RAF proto-oncogene seri 99.1 1.2E-10 4.2E-15 113.4 8.1 87 405-494 36-122 (307)
311 3un9_A NLR family member X1; l 99.1 5.5E-12 1.9E-16 126.3 -1.6 134 69-202 101-254 (372)
312 3llt_A Serine/threonine kinase 99.1 1E-10 3.5E-15 116.4 7.6 97 394-494 24-126 (360)
313 2w1i_A JAK2; chromosomal rearr 99.1 1.5E-10 5.1E-15 113.6 8.3 88 405-494 41-135 (326)
314 2zmd_A Dual specificity protei 99.1 1.7E-10 6E-15 116.2 8.8 88 406-494 57-146 (390)
315 3poz_A Epidermal growth factor 99.1 1.2E-10 4E-15 114.5 7.1 88 405-494 15-107 (327)
316 3nsz_A CK II alpha, casein kin 99.1 3E-10 1E-14 111.4 9.9 85 405-494 36-124 (330)
317 2a19_B Interferon-induced, dou 99.1 1.1E-10 3.9E-15 111.7 6.6 84 405-494 11-111 (284)
318 3dls_A PAS domain-containing s 99.1 6.8E-11 2.3E-15 116.7 5.0 91 404-494 23-121 (335)
319 1byg_A CSK, protein (C-termina 99.1 1.2E-10 4.1E-15 111.4 6.5 86 404-494 20-106 (278)
320 3fme_A Dual specificity mitoge 99.1 1.8E-10 6.3E-15 110.7 7.5 90 404-494 6-96 (290)
321 2izr_A Casein kinase I isoform 99.1 1.3E-10 4.5E-15 114.2 6.5 85 405-494 9-95 (330)
322 3ogk_B Coronatine-insensitive 99.1 1.6E-11 5.6E-16 130.5 -0.1 155 69-224 318-503 (592)
323 3sb4_A Hypothetical leucine ri 99.1 3.6E-10 1.2E-14 111.2 9.5 161 69-232 101-320 (329)
324 3n9x_A Phosphotransferase; mal 99.1 1.7E-10 5.7E-15 118.0 7.3 90 404-494 25-120 (432)
325 3oz6_A Mitogen-activated prote 99.1 2.1E-10 7.3E-15 115.4 8.0 90 404-494 8-101 (388)
326 3mdy_A Bone morphogenetic prot 99.0 5E-10 1.7E-14 110.1 10.2 87 402-494 34-126 (337)
327 3c1x_A Hepatocyte growth facto 99.0 9.7E-11 3.3E-15 117.4 4.9 87 407-494 91-182 (373)
328 1b6c_B TGF-B superfamily recep 99.0 5.8E-10 2E-14 109.9 10.5 87 402-494 39-131 (342)
329 1cm8_A Phosphorylated MAP kina 99.0 9.4E-11 3.2E-15 117.2 4.7 90 404-494 24-120 (367)
330 3mi9_A Cell division protein k 99.0 3.4E-10 1.2E-14 112.2 8.8 88 405-493 17-113 (351)
331 3rp9_A Mitogen-activated prote 99.0 1.5E-10 5.2E-15 119.2 6.4 90 404-494 52-147 (458)
332 3mtl_A Cell division protein k 99.0 8.7E-11 3E-15 115.3 4.3 88 405-494 2-90 (324)
333 2wtk_C Serine/threonine-protei 99.0 4E-10 1.4E-14 109.2 8.6 89 404-493 4-97 (305)
334 1ua2_A CAK, cell division prot 99.0 2.5E-10 8.7E-15 113.0 7.3 91 403-494 8-102 (346)
335 3cc6_A Protein tyrosine kinase 99.0 3E-10 1E-14 108.9 7.5 89 404-494 11-103 (281)
336 3cek_A Dual specificity protei 99.0 1.5E-10 5.2E-15 112.8 5.3 97 397-494 20-118 (313)
337 3an0_A Dual specificity mitoge 99.0 4.5E-10 1.5E-14 110.8 8.7 90 403-494 49-140 (340)
338 3eb0_A Putative uncharacterize 99.0 3.7E-10 1.3E-14 113.5 8.2 86 402-494 4-128 (383)
339 2xrw_A Mitogen-activated prote 99.0 4.2E-10 1.4E-14 112.6 8.5 90 404-494 24-120 (371)
340 3pls_A Macrophage-stimulating 99.0 2.8E-10 9.5E-15 109.8 6.9 87 407-494 23-114 (298)
341 2i6l_A Mitogen-activated prote 99.0 3.6E-10 1.2E-14 110.1 7.6 87 405-494 11-112 (320)
342 2pzi_A Probable serine/threoni 99.0 1.6E-10 5.4E-15 125.2 5.5 89 405-494 80-175 (681)
343 3f66_A Hepatocyte growth facto 99.0 2.5E-10 8.4E-15 110.4 6.3 88 406-494 26-118 (298)
344 2y4i_B KSR2, HKSR2, kinase sup 99.0 4.7E-11 1.6E-15 116.6 1.2 96 398-495 26-121 (319)
345 3ttj_A Mitogen-activated prote 99.0 3.3E-10 1.1E-14 116.9 7.6 89 404-493 61-156 (464)
346 3sb4_A Hypothetical leucine ri 99.0 9.4E-10 3.2E-14 108.2 10.4 145 69-215 124-327 (329)
347 3kex_A Receptor tyrosine-prote 99.0 1.7E-10 5.7E-15 113.3 4.8 88 405-494 13-105 (325)
348 1nxk_A MAP kinase-activated pr 99.0 4.5E-10 1.5E-14 113.6 7.4 83 405-494 61-150 (400)
349 1blx_A Cyclin-dependent kinase 99.0 2.1E-10 7.3E-15 112.2 4.8 92 402-494 8-109 (326)
350 4exu_A Mitogen-activated prote 99.0 3.9E-10 1.3E-14 112.8 6.5 90 404-494 41-137 (371)
351 3pfq_A PKC-B, PKC-beta, protei 99.0 4.3E-10 1.5E-14 121.3 7.2 92 403-494 339-433 (674)
352 3g33_A Cell division protein k 99.0 1E-09 3.5E-14 106.6 9.2 90 404-494 8-109 (308)
353 3m2w_A MAP kinase-activated pr 99.0 8.6E-10 2.9E-14 106.7 8.4 83 405-494 17-106 (299)
354 3coi_A Mitogen-activated prote 99.0 4.2E-10 1.4E-14 111.7 6.2 89 405-494 24-119 (353)
355 2vuw_A Serine/threonine-protei 99.0 4.9E-10 1.7E-14 110.4 6.5 90 404-494 19-153 (336)
356 2j0j_A Focal adhesion kinase 1 99.0 4.6E-10 1.6E-14 120.7 6.6 91 402-494 387-481 (656)
357 3lzb_A Epidermal growth factor 99.0 6.7E-10 2.3E-14 109.1 7.2 88 405-494 15-107 (327)
358 3aln_A Dual specificity mitoge 99.0 1.2E-09 3.9E-14 107.2 8.9 88 405-494 22-111 (327)
359 3byv_A Rhoptry kinase; malaria 99.0 1.6E-10 5.4E-15 116.0 2.7 90 404-494 72-190 (377)
360 2fst_X Mitogen-activated prote 99.0 3.3E-10 1.1E-14 113.2 4.9 90 404-494 28-124 (367)
361 2b9h_A MAP kinase FUS3, mitoge 99.0 7.4E-10 2.5E-14 109.7 7.2 89 404-494 10-104 (353)
362 3ogk_B Coronatine-insensitive 98.9 2.3E-10 7.7E-15 121.7 3.2 102 70-172 139-252 (592)
363 1u46_A ACK-1, activated CDC42 98.9 6.1E-10 2.1E-14 107.1 6.0 89 405-494 18-111 (291)
364 1csn_A Casein kinase-1; phosph 98.9 1.1E-09 3.6E-14 105.7 7.7 85 405-494 10-96 (298)
365 3rgf_A Cyclin-dependent kinase 98.9 1.5E-09 5.1E-14 109.9 8.4 80 410-494 26-110 (405)
366 2iwi_A Serine/threonine-protei 98.9 3.9E-10 1.3E-14 109.8 3.8 92 403-494 29-130 (312)
367 3g2f_A Bone morphogenetic prot 98.9 2.7E-09 9.1E-14 104.9 9.6 85 404-494 12-103 (336)
368 3qyz_A Mitogen-activated prote 98.9 1.4E-09 4.7E-14 108.5 7.2 89 404-494 26-120 (364)
369 2rio_A Serine/threonine-protei 98.9 1.8E-09 6E-14 110.5 8.0 81 408-494 18-99 (434)
370 3ll6_A Cyclin G-associated kin 98.9 1.2E-09 4.1E-14 107.2 6.4 87 405-494 28-124 (337)
371 2v62_A Serine/threonine-protei 98.9 9.1E-10 3.1E-14 109.0 5.1 89 405-494 37-142 (345)
372 3qa8_A MGC80376 protein; kinas 98.9 2.7E-10 9.1E-15 121.4 1.3 89 405-494 14-109 (676)
373 3e3p_A Protein kinase, putativ 98.9 1.8E-09 6.3E-14 107.2 7.3 88 398-488 16-111 (360)
374 2dyl_A Dual specificity mitoge 98.9 2.4E-09 8.3E-14 104.2 7.8 87 404-491 24-111 (318)
375 2jii_A Serine/threonine-protei 98.9 7.3E-10 2.5E-14 109.9 3.7 82 405-494 42-148 (352)
376 3fhr_A MAP kinase-activated pr 98.9 3.5E-09 1.2E-13 104.4 8.6 85 404-494 27-117 (336)
377 3op5_A Serine/threonine-protei 98.9 1.7E-09 5.7E-14 107.9 5.9 90 404-494 34-142 (364)
378 3p23_A Serine/threonine-protei 98.8 3.1E-09 1.1E-13 108.5 7.4 84 405-494 24-108 (432)
379 3en9_A Glycoprotease, O-sialog 98.8 3.5E-09 1.2E-13 111.2 6.9 87 408-495 339-431 (540)
380 3q60_A ROP5B; pseudokinase, tr 98.8 2.9E-09 1E-13 106.4 6.1 88 405-494 62-178 (371)
381 1j1b_A Glycogen synthase kinas 98.8 2E-09 6.9E-14 109.5 5.0 80 406-492 55-141 (420)
382 3a99_A Proto-oncogene serine/t 98.8 2.2E-09 7.5E-14 105.0 5.0 92 403-494 41-140 (320)
383 3kvw_A DYRK2, dual specificity 98.8 7.9E-09 2.7E-13 105.4 9.1 87 404-494 96-189 (429)
384 2p1m_B Transport inhibitor res 98.8 2.9E-10 1E-14 120.8 -1.7 153 69-223 314-495 (594)
385 3rw6_A Nuclear RNA export fact 98.8 2.1E-11 7.3E-16 115.4 -9.5 64 136-201 167-234 (267)
386 1wak_A Serine/threonine-protei 98.8 4.1E-09 1.4E-13 105.9 6.2 86 405-494 37-135 (397)
387 1z57_A Dual specificity protei 98.8 5.5E-09 1.9E-13 102.4 7.0 86 405-494 14-107 (339)
388 3uzp_A CKI-delta, CKID, casein 98.8 7.4E-09 2.5E-13 99.6 7.7 86 404-494 8-95 (296)
389 4e7w_A Glycogen synthase kinas 98.8 4.8E-09 1.6E-13 105.8 5.8 80 405-490 40-125 (394)
390 4hgt_A Casein kinase I isoform 98.8 9.7E-09 3.3E-13 98.7 7.3 86 404-494 8-95 (296)
391 2p1m_B Transport inhibitor res 98.7 1.9E-09 6.7E-14 114.4 1.5 105 69-173 105-221 (594)
392 3sv0_A Casein kinase I-like; t 98.7 1.8E-08 6.2E-13 104.1 8.3 85 405-494 7-93 (483)
393 1q8y_A SR protein kinase; tran 98.7 7.7E-09 2.6E-13 103.1 5.2 86 405-494 19-120 (373)
394 1zar_A RIO2 kinase; serine kin 98.7 2.2E-08 7.4E-13 96.2 7.7 91 398-492 83-189 (282)
395 2vx3_A Dual specificity tyrosi 98.7 2.4E-08 8E-13 100.2 7.7 88 403-494 52-146 (382)
396 2eu9_A Dual specificity protei 98.6 2.9E-08 1E-12 98.0 6.9 86 405-494 19-112 (355)
397 1io0_A Tropomodulin; LRR prote 98.6 2.5E-09 8.4E-14 96.0 -1.1 114 86-199 29-163 (185)
398 2ra8_A Uncharacterized protein 98.6 2E-08 6.9E-13 99.7 4.8 161 69-230 139-328 (362)
399 3rw6_A Nuclear RNA export fact 98.6 5.2E-08 1.8E-12 92.1 5.7 77 115-193 170-257 (267)
400 1io0_A Tropomodulin; LRR prote 98.5 1.5E-08 5.2E-13 90.8 1.4 109 68-176 35-164 (185)
401 4fdw_A Leucine rich hypothetic 98.5 7.1E-07 2.4E-11 89.9 12.1 144 69-219 180-333 (401)
402 4fdw_A Leucine rich hypothetic 98.4 1.5E-06 5.2E-11 87.5 12.7 124 71-200 159-284 (401)
403 2ra8_A Uncharacterized protein 98.4 4.4E-08 1.5E-12 97.2 0.3 149 68-220 171-341 (362)
404 4azs_A Methyltransferase WBDD; 98.4 2.5E-07 8.5E-12 97.6 5.3 82 413-494 242-333 (569)
405 4gyi_A RIO2 kinase; protein ki 98.0 1.1E-06 3.9E-11 87.2 1.2 85 407-493 97-201 (397)
406 1zth_A RIO1 serine protein kin 98.0 2.3E-06 7.8E-11 80.7 3.2 76 407-486 49-151 (258)
407 3dzo_A Rhoptry kinase domain; 97.9 9.1E-06 3.1E-10 82.2 5.7 60 403-462 76-137 (413)
408 3e4g_A ATP synthase subunit S, 97.7 2.2E-05 7.5E-10 68.9 3.9 84 115-198 61-150 (176)
409 3rfe_A Platelet glycoprotein I 97.7 7.8E-05 2.7E-09 62.2 7.0 56 97-152 12-68 (130)
410 1pgv_A TMD-1, tropomodulin TMD 97.5 3E-05 1E-09 69.3 2.8 85 115-199 70-169 (197)
411 1pgv_A TMD-1, tropomodulin TMD 97.4 3E-05 1E-09 69.3 0.7 65 133-197 64-136 (197)
412 3tm0_A Aminoglycoside 3'-phosp 97.3 0.00078 2.7E-08 63.0 9.1 91 400-493 9-100 (263)
413 3e4g_A ATP synthase subunit S, 97.1 0.0002 6.8E-09 62.7 3.1 82 139-220 61-150 (176)
414 3d1u_A Putative fructosamine-3 97.0 0.0009 3.1E-08 63.9 6.3 76 409-490 19-97 (288)
415 4gt6_A Cell surface protein; l 97.0 0.0033 1.1E-07 62.7 10.7 129 86-220 258-389 (394)
416 3rfe_A Platelet glycoprotein I 97.0 0.0014 4.9E-08 54.4 6.6 56 143-200 12-68 (130)
417 1nd4_A Aminoglycoside 3'-phosp 96.9 0.0008 2.7E-08 62.6 5.2 81 406-491 21-103 (264)
418 4h09_A Hypothetical leucine ri 96.7 0.0051 1.7E-07 60.9 9.8 126 86-216 210-340 (379)
419 4gt6_A Cell surface protein; l 96.6 0.007 2.4E-07 60.3 9.7 123 70-200 266-391 (394)
420 4fs7_A Uncharacterized protein 96.5 0.0082 2.8E-07 59.8 9.8 142 69-219 230-376 (394)
421 4fs7_A Uncharacterized protein 96.4 0.03 1E-06 55.7 13.0 124 88-219 225-353 (394)
422 4h09_A Hypothetical leucine ri 96.0 0.028 9.6E-07 55.4 10.5 129 88-219 189-320 (379)
423 3dxp_A Putative acyl-COA dehyd 94.5 0.036 1.2E-06 54.2 5.4 80 410-491 43-129 (359)
424 3f7w_A Putative fructosamine-3 92.5 0.27 9.1E-06 46.3 7.6 78 407-490 17-97 (288)
425 3jr1_A Putative fructosamine-3 92.2 0.49 1.7E-05 45.2 9.1 76 409-490 40-118 (312)
426 4gkh_A Aminoglycoside 3'-phosp 91.5 0.66 2.3E-05 42.8 8.9 77 411-492 30-109 (272)
427 3cxl_A N-chimerin; SH2, RHO-GA 90.6 0.03 1E-06 57.1 -1.5 62 410-474 147-215 (463)
428 3r70_A Aminoglycoside phosphot 90.2 0.42 1.4E-05 45.7 6.4 74 406-491 38-115 (320)
429 2olc_A MTR kinase, methylthior 87.9 0.57 1.9E-05 46.3 5.6 77 410-488 35-120 (397)
430 3ovc_A Hygromycin-B 4-O-kinase 86.7 1.7 5.8E-05 42.3 8.2 76 408-491 44-122 (362)
431 3tdw_A Gentamicin resistance p 83.4 2.2 7.4E-05 40.4 7.0 75 410-492 24-102 (306)
432 3ats_A Putative uncharacterize 75.2 1.2 4.1E-05 43.0 2.3 81 411-491 26-121 (357)
433 3sg8_A APH(2'')-ID; antibiotic 69.8 2.5 8.4E-05 39.8 3.0 74 410-491 25-104 (304)
434 1zyl_A Hypothetical protein YI 68.1 10 0.00035 35.7 7.1 75 411-489 32-113 (328)
435 2ks1_B Epidermal growth factor 66.4 6.2 0.00021 25.3 3.3 8 295-302 31-38 (44)
436 2q83_A YTAA protein; 2635576, 65.9 9.4 0.00032 36.0 6.4 73 411-490 38-118 (346)
437 2l2t_A Receptor tyrosine-prote 64.9 6.8 0.00023 25.1 3.3 6 297-302 32-37 (44)
438 2k1k_A Ephrin type-A receptor 63.6 5.2 0.00018 24.8 2.5 21 281-301 17-37 (38)
439 2ppq_A HSK, HK, homoserine kin 57.9 16 0.00055 34.2 6.3 91 395-490 7-110 (322)
440 2jwa_A Receptor tyrosine-prote 56.9 8.6 0.0003 24.6 2.7 6 297-302 34-39 (44)
441 2pyw_A Uncharacterized protein 40.7 46 0.0016 32.5 6.7 75 410-487 39-122 (420)
442 1nw1_A Choline kinase (49.2 KD 33.1 45 0.0015 32.9 5.1 73 410-490 78-159 (429)
443 2lz0_A Uncharacterized protein 28.8 63 0.0022 24.5 4.2 40 156-196 13-52 (100)
444 3feg_A Choline/ethanolamine ki 26.8 52 0.0018 31.9 4.3 73 411-490 56-137 (379)
445 2qg7_A Ethanolamine kinase PV0 25.3 1.1E+02 0.0037 30.5 6.4 74 410-490 113-188 (458)
446 3csv_A Aminoglycoside phosphot 24.6 1.6E+02 0.0055 27.2 7.3 76 411-493 24-102 (333)
447 3dxq_A Choline/ethanolamine ki 23.9 83 0.0028 28.9 5.0 71 410-490 23-95 (301)
448 2lz0_A Uncharacterized protein 23.6 1.5E+02 0.0052 22.3 5.6 46 127-173 8-53 (100)
449 3i1a_A Spectinomycin phosphotr 22.6 1.9E+02 0.0065 27.0 7.4 68 414-490 32-108 (339)
No 1
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=3.4e-32 Score=267.86 Aligned_cols=209 Identities=27% Similarity=0.469 Sum_probs=193.3
Q ss_pred CCChHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcccEEecC----CCEeEEEcCCCCCcc--ccccccCCCCCCcE
Q 040888 24 KTDSQDASALNVMYTSLHSPSQLSNWKAGGGDPCGEHWKGITCSG----SSVTEIKLSGLGLNG--QLGYQLTNLKSVSY 97 (495)
Q Consensus 24 ~~~~~~~~~L~~~~~~~~~~~~l~~w~~~~~~~C~~~w~gv~c~~----~~v~~l~L~~n~l~g--~~~~~~~~l~~L~~ 97 (495)
.|.++|++||++||+++.++..+.+|.. +.+||.+.|.||.|+. ++|+.|+|++|+++| .+|..+.++++|++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 4788999999999999987767889975 5689955599999985 689999999999999 99999999999999
Q ss_pred EECcC-CCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCc
Q 040888 98 LDVSN-NNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQ 174 (495)
Q Consensus 98 L~Ls~-N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 174 (495)
|+|++ |.+.+.+|..+. ++|++|+|++|++++.+|..+.++++|++|+|++|.+++.+|..+..+++|++|+|++|+
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 99995 999999998876 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCcccccCCC-CCCEEeccCCcccccc-cccCCccCcEEEeecCCCcccCchhhhhcc
Q 040888 175 LTGELPRSFASLS-SLKKLYLQNNQFTGSI-NVLGKLPLDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 175 l~g~~p~~~~~l~-~L~~L~l~~N~l~g~~-~~~~~~~L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
++|.+|..+..++ +|+.|+|++|++++.+ ..+..+.|+.|++++|.+++.+|..+..++
T Consensus 161 l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~ 221 (313)
T 1ogq_A 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDK 221 (313)
T ss_dssp CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTS
T ss_pred ccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCC
Confidence 9999999999998 9999999999999877 667777799999999999999998887665
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.95 E-value=5.7e-28 Score=265.95 Aligned_cols=208 Identities=25% Similarity=0.382 Sum_probs=159.8
Q ss_pred cccCCChHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcccEEecCCCEeEEEcCCCCCccc---cc-----------
Q 040888 21 VLSKTDSQDASALNVMYTSLHSPSQLSNWKAGGGDPCGEHWKGITCSGSSVTEIKLSGLGLNGQ---LG----------- 86 (495)
Q Consensus 21 ~~~~~~~~~~~~L~~~~~~~~~~~~l~~w~~~~~~~C~~~w~gv~c~~~~v~~l~L~~n~l~g~---~~----------- 86 (495)
+++...++|++||++||+++.++..+++|.. +.+|| .|.||.|+.++|+.|+|+++++.|. +|
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~~l~~W~~-~~~~C--~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKNLLPDWSS-NKNPC--TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTTSSTTCCT-TSCGG--GSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred ccccCCHHHHHHHHHHHhhCCCcccccCCCC-CCCCc--CCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 3344467899999999999987767899974 57888 8999999988999999999999997 55
Q ss_pred ------------cccCCCCCCcEEECcCCCCCCCCCC--CCC--CCCcEEECcCCcCCCCcchhc-cCCCCCcEEEcccC
Q 040888 87 ------------YQLTNLKSVSYLDVSNNNLKDSIPY--QLP--PNLKHLDLSENQFSGTVPYSI-SQMSELKYLNLGSN 149 (495)
Q Consensus 87 ------------~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~--~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~L~~N 149 (495)
..++++++|++|||++|.+.|.+|. .+. ++|++|||++|.+++.+|..+ .++++|++|+|++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 4566777788888888887777776 554 677888888887777777665 67777777777777
Q ss_pred cCCCccchh---hhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccC
Q 040888 150 QLNGQLSDM---FQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWV 225 (495)
Q Consensus 150 ~l~g~~p~~---~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~ 225 (495)
++++..|.. +.++++|++|++++|.+++.+|. ..+++|++|+|++|++++.++.++.++ |++|++++|.+++.+
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCH
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCcc
Confidence 777777766 66777777777777777766553 677778888888888877665566666 888888888888877
Q ss_pred chhhhhcc
Q 040888 226 PEELKDIA 233 (495)
Q Consensus 226 p~~l~~l~ 233 (495)
|..+..++
T Consensus 240 ~~~l~~l~ 247 (768)
T 3rgz_A 240 SRAISTCT 247 (768)
T ss_dssp HHHTTTCS
T ss_pred cHHHhcCC
Confidence 77776655
No 3
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.94 E-value=5.1e-28 Score=266.37 Aligned_cols=205 Identities=19% Similarity=0.328 Sum_probs=166.4
Q ss_pred cCCChHHHHHHHHHHHcCCCCCCCCCCCCCC----CCCCCCCc------------ccEEecC-CCEeEEEcCCCCCcccc
Q 040888 23 SKTDSQDASALNVMYTSLHSPSQLSNWKAGG----GDPCGEHW------------KGITCSG-SSVTEIKLSGLGLNGQL 85 (495)
Q Consensus 23 ~~~~~~~~~~L~~~~~~~~~~~~l~~w~~~~----~~~C~~~w------------~gv~c~~-~~v~~l~L~~n~l~g~~ 85 (495)
+.+..+|+.||++||+++.++ +|...+ .+||.|.| .||.|+. ++|+.|+|++++|.|.+
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEE
T ss_pred cccchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcC
Confidence 345567999999999999876 786543 46744599 9999984 79999999999999999
Q ss_pred ccccCCCCCCcEEEC-cCCCCCCC--------------------------------------------------------
Q 040888 86 GYQLTNLKSVSYLDV-SNNNLKDS-------------------------------------------------------- 108 (495)
Q Consensus 86 ~~~~~~l~~L~~L~L-s~N~l~g~-------------------------------------------------------- 108 (495)
|+.+++|++|+.||| ++|.+.|.
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 88876554
Q ss_pred --------------------CCCCCC--CCCcEEECcCCcCCC-----------------Ccchhcc--CCCCCcEEEcc
Q 040888 109 --------------------IPYQLP--PNLKHLDLSENQFSG-----------------TVPYSIS--QMSELKYLNLG 147 (495)
Q Consensus 109 --------------------~p~~~~--~~L~~L~Ls~N~l~g-----------------~~p~~~~--~l~~L~~L~L~ 147 (495)
+|..+. ++|++|+|++|+|+| .+|..++ ++++|++|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 555444 789999999999998 3888877 99999999999
Q ss_pred cCcCCCccchhhhCCCCCcEEEccCCc-CCC-cCcccccCCC-------CCCEEeccCCccccccc--ccCCcc-CcEEE
Q 040888 148 SNQLNGQLSDMFQKNEKLETLDLSKNQ-LTG-ELPRSFASLS-------SLKKLYLQNNQFTGSIN--VLGKLP-LDELN 215 (495)
Q Consensus 148 ~N~l~g~~p~~~~~l~~L~~L~ls~N~-l~g-~~p~~~~~l~-------~L~~L~l~~N~l~g~~~--~~~~~~-L~~l~ 215 (495)
+|++.|.+|..+.++++|+.|+|++|+ ++| .+|..+++++ +|+.|+|++|+++..+. .+..++ |+.|+
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~ 579 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLD 579 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEE
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEE
Confidence 999999999999999999999999998 888 7787666554 88888888888883334 566666 78888
Q ss_pred eecCCCcccCchhhhhcc
Q 040888 216 VENNKFSGWVPEELKDIA 233 (495)
Q Consensus 216 l~~N~l~g~~p~~l~~l~ 233 (495)
+++|.++ .+| .+..++
T Consensus 580 Ls~N~l~-~lp-~~~~L~ 595 (876)
T 4ecn_A 580 CVHNKVR-HLE-AFGTNV 595 (876)
T ss_dssp CTTSCCC-BCC-CCCTTS
T ss_pred CCCCCcc-cch-hhcCCC
Confidence 8888777 676 555444
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.94 E-value=7.9e-28 Score=259.19 Aligned_cols=205 Identities=16% Similarity=0.314 Sum_probs=176.3
Q ss_pred CCChHHHHHHHHHHHcCCCCCC---------CCCCCCCCCCCCCCCc---ccEEecC-CCEeEEEcCCCCCccccccccC
Q 040888 24 KTDSQDASALNVMYTSLHSPSQ---------LSNWKAGGGDPCGEHW---KGITCSG-SSVTEIKLSGLGLNGQLGYQLT 90 (495)
Q Consensus 24 ~~~~~~~~~L~~~~~~~~~~~~---------l~~w~~~~~~~C~~~w---~gv~c~~-~~v~~l~L~~n~l~g~~~~~~~ 90 (495)
.....|+.||.+++.+++.+.+ ..+|.. +.++| .| .||.|+. ++|+.|+|++++++|.+|+.++
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c--~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~ 102 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELD--MWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIG 102 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGG--GTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGG
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcc--cccCCCCeEEcCCCCEEEEEecCcccCCcCChHHh
Confidence 3445799999999999866531 237975 56788 89 9999975 5999999999999999999999
Q ss_pred CCCCCcEEECcCCCC-----------------------------------------------------------------
Q 040888 91 NLKSVSYLDVSNNNL----------------------------------------------------------------- 105 (495)
Q Consensus 91 ~l~~L~~L~Ls~N~l----------------------------------------------------------------- 105 (495)
+|++|++|||++|.+
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 999999999999944
Q ss_pred -------------CCCCCCCCC--CCCcEEECcCCcCCCC-----------------cchhcc--CCCCCcEEEcccCcC
Q 040888 106 -------------KDSIPYQLP--PNLKHLDLSENQFSGT-----------------VPYSIS--QMSELKYLNLGSNQL 151 (495)
Q Consensus 106 -------------~g~~p~~~~--~~L~~L~Ls~N~l~g~-----------------~p~~~~--~l~~L~~L~L~~N~l 151 (495)
+| +|..+. ++|++|+|++|+|+|. +|..++ ++++|++|+|++|++
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 34 666665 8999999999999986 999999 999999999999999
Q ss_pred CCccchhhhCCCCCcEEEccCCc-CCC-cCcccccCC------CCCCEEeccCCccccccc--ccCCcc-CcEEEeecCC
Q 040888 152 NGQLSDMFQKNEKLETLDLSKNQ-LTG-ELPRSFASL------SSLKKLYLQNNQFTGSIN--VLGKLP-LDELNVENNK 220 (495)
Q Consensus 152 ~g~~p~~~~~l~~L~~L~ls~N~-l~g-~~p~~~~~l------~~L~~L~l~~N~l~g~~~--~~~~~~-L~~l~l~~N~ 220 (495)
.|.+|..++++++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++..+. .++.++ |+.|++++|.
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~ 341 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQ 341 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCC
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCc
Confidence 99999999999999999999998 998 899888876 899999999999994445 678877 9999999999
Q ss_pred CcccCchhhhhcc
Q 040888 221 FSGWVPEELKDIA 233 (495)
Q Consensus 221 l~g~~p~~l~~l~ 233 (495)
++|.+| .+..++
T Consensus 342 l~g~ip-~~~~l~ 353 (636)
T 4eco_A 342 LEGKLP-AFGSEI 353 (636)
T ss_dssp CEEECC-CCEEEE
T ss_pred Cccchh-hhCCCC
Confidence 998888 665544
No 5
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.93 E-value=1.4e-26 Score=229.19 Aligned_cols=204 Identities=20% Similarity=0.269 Sum_probs=178.6
Q ss_pred CCChHHHHHHHHHHHcCC-CC-CCCCCCC---CCCCCCCCCCcccEEecC----------CCEeEEEcCCCCCccccccc
Q 040888 24 KTDSQDASALNVMYTSLH-SP-SQLSNWK---AGGGDPCGEHWKGITCSG----------SSVTEIKLSGLGLNGQLGYQ 88 (495)
Q Consensus 24 ~~~~~~~~~L~~~~~~~~-~~-~~l~~w~---~~~~~~C~~~w~gv~c~~----------~~v~~l~L~~n~l~g~~~~~ 88 (495)
....++..||++||.++. ++ ..+.+|. ....++| .|.|+.|.. .+|+.|+|++|+++ .+|..
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~--~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE--TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC--CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc--ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 345678899999999873 33 3456784 2345677 899999952 68999999999998 78888
Q ss_pred cCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhC-----
Q 040888 89 LTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQK----- 161 (495)
Q Consensus 89 ~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~----- 161 (495)
++++++|++|+|++|.++ .+|..+. ++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..+..
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 999999999999999999 8898776 89999999999999 88999999999999999999999999987764
Q ss_pred ----CCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccCchhhhhcc
Q 040888 162 ----NEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 162 ----l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
+++|++|+|++|+++ .+|..+.++++|+.|+|++|++++.++.+..++ |+.|++++|.+.+.+|..+..++
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~ 253 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRA 253 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCC
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCC
Confidence 999999999999999 889999999999999999999998777777777 99999999999999998887766
No 6
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.90 E-value=1.6e-23 Score=193.30 Aligned_cols=174 Identities=25% Similarity=0.304 Sum_probs=151.9
Q ss_pred CCCCCCcccEEecC-----------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEE
Q 040888 55 DPCGEHWKGITCSG-----------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLD 121 (495)
Q Consensus 55 ~~C~~~w~gv~c~~-----------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 121 (495)
+.|.|.|.+|.|+. .+++.|+|++|++++..+..|.++++|++|+|++|++++..+..+. ++|++|+
T Consensus 3 ~~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 56777999999974 2589999999999987777899999999999999999965554444 8999999
Q ss_pred CcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccc
Q 040888 122 LSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTG 201 (495)
Q Consensus 122 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 201 (495)
|++|++++..+..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+.+
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 99999998777778999999999999999998888889999999999999999998777778999999999999998876
Q ss_pred cccccCCccCcEEEeecCCCcccCchhhhhcc
Q 040888 202 SINVLGKLPLDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 202 ~~~~~~~~~L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
..+ .|+.|+++.|.++|.+|.+++++.
T Consensus 163 ~~~-----~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 163 TCP-----GIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp CTT-----TTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred CCC-----CHHHHHHHHHhCCceeeccCcccc
Confidence 432 278889999999999999888765
No 7
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.89 E-value=2.6e-23 Score=228.85 Aligned_cols=70 Identities=33% Similarity=0.591 Sum_probs=35.4
Q ss_pred CCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcccCchhhhhcc
Q 040888 164 KLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 164 ~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
+|+.|||++|+++|.+|..++++++|+.|+|++|+++|.+ ..++.++ |+.|||++|+++|.+|..+.+++
T Consensus 633 ~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~ 704 (768)
T 3rgz_A 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALT 704 (768)
T ss_dssp CCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCC
T ss_pred cccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCC
Confidence 3444555555555555555555555555555555555544 3444444 55555555555555555554443
No 8
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=2e-22 Score=193.62 Aligned_cols=163 Identities=25% Similarity=0.296 Sum_probs=103.5
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcc
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
.++.|+|++|++++..+..|.++++|++|+|++|.++...+..+. ++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 356666666666665555666777777777777766633322222 667777777777766555566667777777777
Q ss_pred cCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcccC
Q 040888 148 SNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGWV 225 (495)
Q Consensus 148 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~~ 225 (495)
+|++++..+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|++++.. ..+..++ |+.|++++|.+++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 77776666666666777777777777776555555666677777777777766655 3345554 677777777766544
Q ss_pred chhhhhc
Q 040888 226 PEELKDI 232 (495)
Q Consensus 226 p~~l~~l 232 (495)
+..+..+
T Consensus 198 ~~~~~~l 204 (270)
T 2o6q_A 198 EGAFDSL 204 (270)
T ss_dssp TTTTTTC
T ss_pred HHHhccc
Confidence 4444433
No 9
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.89 E-value=2e-23 Score=205.16 Aligned_cols=165 Identities=27% Similarity=0.481 Sum_probs=110.0
Q ss_pred CCEeEEEcCC-CCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 69 SSVTEIKLSG-LGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~-n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
.+++.|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..+. ++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 4677777774 777777777777777777777777777777776554 6777777777777777777777777777777
Q ss_pred cccCcCCCccchhhhCCC-CCcEEEccCCcCCCcCccc-----------------------ccCCCCCCEEeccCCcccc
Q 040888 146 LGSNQLNGQLSDMFQKNE-KLETLDLSKNQLTGELPRS-----------------------FASLSSLKKLYLQNNQFTG 201 (495)
Q Consensus 146 L~~N~l~g~~p~~~~~l~-~L~~L~ls~N~l~g~~p~~-----------------------~~~l~~L~~L~l~~N~l~g 201 (495)
|++|+++|.+|..+..+. +|+.|+|++|++++.+|.. +..+++|+.|+|++|++++
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceee
Confidence 777777666666666665 6666666666666555544 4455555555555555555
Q ss_pred cccccCCcc-CcEEEeecCCCcccCchhhhhcc
Q 040888 202 SINVLGKLP-LDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 202 ~~~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
.++.+..++ |+.|++++|.++|.+|..+..++
T Consensus 236 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 268 (313)
T 1ogq_A 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLK 268 (313)
T ss_dssp BGGGCCCCTTCCEEECCSSCCEECCCGGGGGCT
T ss_pred ecCcccccCCCCEEECcCCcccCcCChHHhcCc
Confidence 554444444 67777777777777776666554
No 10
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=5.7e-22 Score=188.40 Aligned_cols=168 Identities=24% Similarity=0.325 Sum_probs=88.9
Q ss_pred CcccEEecCCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccC
Q 040888 60 HWKGITCSGSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQ 137 (495)
Q Consensus 60 ~w~gv~c~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~ 137 (495)
.|.|..|. ...+.+++++++++ .+|..+. ++|+.|+|++|.+.+..|..+. ++|++|+|++|+|++..|..|..
T Consensus 6 ~~~gC~C~-~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (251)
T 3m19_A 6 TVTGCTCN-EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDD 81 (251)
T ss_dssp HHHSSEEE-GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT
T ss_pred CCCceEcC-CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhcc
Confidence 56666663 23344555555554 2333332 3555555555555554444443 55555555555555555555555
Q ss_pred CCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCccccccc-ccCCcc-CcEEE
Q 040888 138 MSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSIN-VLGKLP-LDELN 215 (495)
Q Consensus 138 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~-~~~~~~-L~~l~ 215 (495)
+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++.++ .+..++ |+.|+
T Consensus 82 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 161 (251)
T 3m19_A 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEE
Confidence 5555555555555555555555555555555555555554444445555555555555555554442 344444 55555
Q ss_pred eecCCCcccCchhhhh
Q 040888 216 VENNKFSGWVPEELKD 231 (495)
Q Consensus 216 l~~N~l~g~~p~~l~~ 231 (495)
+++|.+++..|..+..
T Consensus 162 L~~N~l~~~~~~~~~~ 177 (251)
T 3m19_A 162 LSTNQLQSVPHGAFDR 177 (251)
T ss_dssp CCSSCCSCCCTTTTTT
T ss_pred CCCCcCCccCHHHHhC
Confidence 5555555544444433
No 11
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=9.1e-22 Score=186.98 Aligned_cols=166 Identities=25% Similarity=0.374 Sum_probs=150.0
Q ss_pred CcccEEecC-----------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCc
Q 040888 60 HWKGITCSG-----------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQ 126 (495)
Q Consensus 60 ~w~gv~c~~-----------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~ 126 (495)
.|..+.|.. ..++.|+|++|++++..+..|.++++|++|+|++|.+++..|..+. ++|++|+|++|+
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 94 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CCeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCc
Confidence 466677753 3689999999999999999999999999999999999987776665 899999999999
Q ss_pred CCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cc
Q 040888 127 FSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NV 205 (495)
Q Consensus 127 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~ 205 (495)
+++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++.+ ..
T Consensus 95 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 174 (251)
T 3m19_A 95 LASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGA 174 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred ccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHH
Confidence 99888888999999999999999999888888999999999999999999877778999999999999999999877 46
Q ss_pred cCCcc-CcEEEeecCCCcccC
Q 040888 206 LGKLP-LDELNVENNKFSGWV 225 (495)
Q Consensus 206 ~~~~~-L~~l~l~~N~l~g~~ 225 (495)
+..++ |+.|++++|++++..
T Consensus 175 ~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 175 FDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp TTTCTTCCEEECCSCCBCTTS
T ss_pred HhCCCCCCEEEeeCCceeCCc
Confidence 77776 999999999999873
No 12
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.87 E-value=5.9e-22 Score=195.95 Aligned_cols=161 Identities=17% Similarity=0.297 Sum_probs=93.1
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccC---------
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQ--------- 137 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~--------- 137 (495)
.+++.|+|++|.++ .+|..++++++|++|+|++|.++ .+|..+. ++|++|+|++|++.+.+|..+..
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 35666666666666 55666666666666666666665 4554443 55666666666655555555443
Q ss_pred CCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEE
Q 040888 138 MSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELN 215 (495)
Q Consensus 138 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~ 215 (495)
+++|++|+|++|+|+ .+|..+..+++|++|+|++|.+++ +|..+..+++|+.|+|++|++.+.+ ..+..++ |+.|+
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 259 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLI 259 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEE
Confidence 556666666666665 555555556666666666666653 4445555666666666665555555 3344444 56666
Q ss_pred eecCCCcccCchhhhhcc
Q 040888 216 VENNKFSGWVPEELKDIA 233 (495)
Q Consensus 216 l~~N~l~g~~p~~l~~l~ 233 (495)
+++|.+.+.+|..+.+++
T Consensus 260 L~~n~~~~~~p~~~~~l~ 277 (328)
T 4fcg_A 260 LKDCSNLLTLPLDIHRLT 277 (328)
T ss_dssp CTTCTTCCBCCTTGGGCT
T ss_pred CCCCCchhhcchhhhcCC
Confidence 666555555655555444
No 13
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.86 E-value=4.7e-21 Score=185.49 Aligned_cols=165 Identities=22% Similarity=0.303 Sum_probs=147.9
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCc-CCCCcchhccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQ-FSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~ 145 (495)
.+++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..+. ++|++|+|++|. ++...|..+..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 3689999999999998888899999999999999999987777776 899999999997 8777788999999999999
Q ss_pred cccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcc
Q 040888 146 LGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 146 L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g 223 (495)
|++|.+++..|..+..+++|++|++++|++++..+..|..+++|+.|+|++|++++.. ..+..++ |+.|++++|.+++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 9999999988999999999999999999999877778999999999999999999776 4577776 9999999999999
Q ss_pred cCchhhhhcc
Q 040888 224 WVPEELKDIA 233 (495)
Q Consensus 224 ~~p~~l~~l~ 233 (495)
..|..+..++
T Consensus 192 ~~~~~~~~l~ 201 (285)
T 1ozn_A 192 VHPHAFRDLG 201 (285)
T ss_dssp ECTTTTTTCT
T ss_pred cCHhHccCcc
Confidence 9888887665
No 14
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.85 E-value=9.6e-21 Score=183.28 Aligned_cols=165 Identities=25% Similarity=0.294 Sum_probs=149.4
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCC-CCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNN-LKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
.+++.|+|++|.+++..|..|.++++|++|+|++|. +....|..+. ++|++|+|++|.+++..|..+.++++|++|+
T Consensus 56 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 689999999999999989999999999999999998 7665566665 8999999999999998899999999999999
Q ss_pred cccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcc
Q 040888 146 LGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 146 L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g 223 (495)
|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+++.. ..+..++ |+.|++++|.+++
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 215 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCc
Confidence 9999999888888999999999999999999777778999999999999999999886 6677776 9999999999998
Q ss_pred cCchhhhhcc
Q 040888 224 WVPEELKDIA 233 (495)
Q Consensus 224 ~~p~~l~~l~ 233 (495)
..+..+..++
T Consensus 216 ~~~~~~~~l~ 225 (285)
T 1ozn_A 216 LPTEALAPLR 225 (285)
T ss_dssp CCHHHHTTCT
T ss_pred CCHHHcccCc
Confidence 7777777655
No 15
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.85 E-value=9.1e-21 Score=184.04 Aligned_cols=162 Identities=25% Similarity=0.252 Sum_probs=144.5
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
..++.|+|++|.+++..+..|.++++|+.|+|++|.+++..+....++|++|+|++|+|+ .+|..+..+++|++|+|++
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~ 109 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCS
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCCCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCC
Confidence 468999999999999999999999999999999999997555444489999999999998 7888899999999999999
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcccCc
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGWVP 226 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~~p 226 (495)
|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.+ ..+..++ |+.|++++|.|+ .+|
T Consensus 110 N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip 188 (290)
T 1p9a_G 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIP 188 (290)
T ss_dssp SCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCC
T ss_pred CcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccC
Confidence 9999888899999999999999999999887888899999999999999999877 4556676 999999999998 567
Q ss_pred hhhhhc
Q 040888 227 EELKDI 232 (495)
Q Consensus 227 ~~l~~l 232 (495)
..+...
T Consensus 189 ~~~~~~ 194 (290)
T 1p9a_G 189 KGFFGS 194 (290)
T ss_dssp TTTTTT
T ss_pred hhhccc
Confidence 665543
No 16
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.84 E-value=3.1e-21 Score=188.73 Aligned_cols=178 Identities=23% Similarity=0.309 Sum_probs=143.1
Q ss_pred CCCCCCcccEEecC-----------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCC--CCCCC--CCCCcE
Q 040888 55 DPCGEHWKGITCSG-----------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDS--IPYQL--PPNLKH 119 (495)
Q Consensus 55 ~~C~~~w~gv~c~~-----------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~--~p~~~--~~~L~~ 119 (495)
+.|.|.|+++.|+. .+++.|+|++|+++...+..|.++++|++|+|++|.++.. +|..+ .++|++
T Consensus 3 ~~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 82 (306)
T 2z66_A 3 SRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY 82 (306)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCE
T ss_pred CCCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCE
Confidence 56777999999975 3689999999999965555689999999999999999832 23222 278999
Q ss_pred EECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccc-hhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCc
Q 040888 120 LDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLS-DMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQ 198 (495)
Q Consensus 120 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 198 (495)
|+|++|.++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++..|..+..+++|++|+|++|.
T Consensus 83 L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 83 LDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp EECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred EECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 999999888 577778888888888888888887655 578888888888888888888888888888888888888888
Q ss_pred cccc-c-cccCCcc-CcEEEeecCCCcccCchhhhhcc
Q 040888 199 FTGS-I-NVLGKLP-LDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 199 l~g~-~-~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
+++. + ..+..++ |+.|++++|.+++..|..+..++
T Consensus 162 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 199 (306)
T 2z66_A 162 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 199 (306)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred cccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCC
Confidence 8872 2 5566666 88888888888887777776655
No 17
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=2.4e-20 Score=173.53 Aligned_cols=157 Identities=22% Similarity=0.343 Sum_probs=110.9
Q ss_pred CCCCCCCcccEEecCCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCc
Q 040888 54 GDPCGEHWKGITCSGSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTV 131 (495)
Q Consensus 54 ~~~C~~~w~gv~c~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~ 131 (495)
+..|.|.|..+.|.. ++++ .+|..+. ++|+.|+|++|.+++..+..+. ++|++|+|++|++++..
T Consensus 6 P~~C~C~~~~v~c~~----------~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~ 72 (220)
T 2v9t_B 6 PAACTCSNNIVDCRG----------KGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELA 72 (220)
T ss_dssp CTTSEEETTEEECTT----------SCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEEC
T ss_pred CCCCEECCCEEEcCC----------CCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcC
Confidence 456766777777754 3333 2344333 5677777777777755544444 67777888888777777
Q ss_pred chhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc
Q 040888 132 PYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP 210 (495)
Q Consensus 132 p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~ 210 (495)
|..|.++++|++|+|++|+|+...+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.. ..+..++
T Consensus 73 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 152 (220)
T 2v9t_B 73 PDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 152 (220)
T ss_dssp TTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred HHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCC
Confidence 777777788888888888877666666777777888888888887777777777778888888888777766 4455555
Q ss_pred -CcEEEeecCCCcc
Q 040888 211 -LDELNVENNKFSG 223 (495)
Q Consensus 211 -L~~l~l~~N~l~g 223 (495)
|+.|++++|++..
T Consensus 153 ~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 153 AIQTMHLAQNPFIC 166 (220)
T ss_dssp TCCEEECCSSCEEC
T ss_pred CCCEEEeCCCCcCC
Confidence 7778888887765
No 18
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.84 E-value=5e-20 Score=177.08 Aligned_cols=156 Identities=31% Similarity=0.400 Sum_probs=126.1
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
.+++.|+|++|.+++. +.+.++++|++|+|++|.+++..|..+. ++|++|+|++|++++..|..+..+++|++|+|
T Consensus 63 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp TTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 6788888888888873 4688888888888888888866665443 78888888888888777777888888888888
Q ss_pred ccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCccc
Q 040888 147 GSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGW 224 (495)
Q Consensus 147 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~ 224 (495)
++|++++..+..+..+++|+.|++++|++++..+..+..+++|+.|+|++|++++.+ ..+..++ |+.|++++|.+.+.
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc
Confidence 888888777777888888888888888888777777788888888888888888776 4456666 88888888888877
Q ss_pred Cc
Q 040888 225 VP 226 (495)
Q Consensus 225 ~p 226 (495)
.|
T Consensus 221 ~~ 222 (272)
T 3rfs_A 221 CP 222 (272)
T ss_dssp TT
T ss_pred Cc
Confidence 66
No 19
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=1.8e-20 Score=174.32 Aligned_cols=151 Identities=26% Similarity=0.303 Sum_probs=124.6
Q ss_pred EEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCC-CC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccC
Q 040888 73 EIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQ-LP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSN 149 (495)
Q Consensus 73 ~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 149 (495)
.+++++|.++. +|..+. ..+++|+|++|.+++..|.. +. ++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 45566677764 565553 34689999999998776643 32 88999999999999877778999999999999999
Q ss_pred cCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcccCc
Q 040888 150 QLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGWVP 226 (495)
Q Consensus 150 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~~p 226 (495)
+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++.. ..+..++ |+.|++++|.+++..+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999888888999999999999999999888888999999999999999999875 5677776 8999999999987655
No 20
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.83 E-value=2e-20 Score=180.18 Aligned_cols=161 Identities=21% Similarity=0.221 Sum_probs=138.2
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcc
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
+++.|+|++|.+++..+..|.++++|++|+|++|.+.+..+..+. ++|++|+|++|.+++..|..+.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 589999999999988888999999999999999999876665555 899999999999998888899999999999999
Q ss_pred cCcCCCccchhhhCCCCCcEEEccCCcCCCc-CcccccCCCCCCEEeccCCcccccc-cccCCcc-Cc----EEEeecCC
Q 040888 148 SNQLNGQLSDMFQKNEKLETLDLSKNQLTGE-LPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LD----ELNVENNK 220 (495)
Q Consensus 148 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~----~l~l~~N~ 220 (495)
+|++++..+..+..+++|++|++++|.+++. +|..+.++++|+.|+|++|++++.. ..+..+. |+ .|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 9999988777899999999999999999874 6899999999999999999998765 3444333 44 78999999
Q ss_pred CcccCchhhh
Q 040888 221 FSGWVPEELK 230 (495)
Q Consensus 221 l~g~~p~~l~ 230 (495)
+++..+..+.
T Consensus 189 l~~~~~~~~~ 198 (276)
T 2z62_A 189 MNFIQPGAFK 198 (276)
T ss_dssp CCEECTTSSC
T ss_pred ccccCccccC
Confidence 9876665444
No 21
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=4.8e-20 Score=172.57 Aligned_cols=158 Identities=25% Similarity=0.328 Sum_probs=118.8
Q ss_pred CCCCCCCCcccEEecCCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCC
Q 040888 53 GGDPCGEHWKGITCSGSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGT 130 (495)
Q Consensus 53 ~~~~C~~~w~gv~c~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~ 130 (495)
+...| +|++|.|+..+++ .+|..+. ++|++|+|++|.+++..|..+. ++|++|+|++|+|++.
T Consensus 15 ~~~~C--s~~~v~c~~~~l~-----------~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i 79 (229)
T 3e6j_A 15 SQCSC--SGTTVDCRSKRHA-----------SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGAL 79 (229)
T ss_dssp TTCEE--ETTEEECTTSCCS-----------SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCEE--eCCEeEccCCCcC-----------ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCc
Confidence 44566 8999999754332 3344332 6788888888888877676654 7888888888888766
Q ss_pred cchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCc
Q 040888 131 VPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKL 209 (495)
Q Consensus 131 ~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~ 209 (495)
.+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.. ..+..+
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 158 (229)
T 3e6j_A 80 PVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRL 158 (229)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTC
T ss_pred ChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCC
Confidence 5566788888888888888888777777788888888888888887 67777888888888888888888766 456666
Q ss_pred c-CcEEEeecCCCcccCc
Q 040888 210 P-LDELNVENNKFSGWVP 226 (495)
Q Consensus 210 ~-L~~l~l~~N~l~g~~p 226 (495)
+ |+.|++++|.+.+..+
T Consensus 159 ~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 159 SSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TTCCEEECTTSCBCTTBG
T ss_pred CCCCEEEeeCCCccCCcc
Confidence 5 8888888888877654
No 22
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.83 E-value=1.2e-19 Score=174.35 Aligned_cols=171 Identities=26% Similarity=0.331 Sum_probs=146.8
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+++.|++.+|.+... +.+..+++|++|+|++|.+.+.-...-.++|++|+|++|.+++..+..+.++++|++|+|++
T Consensus 41 ~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 118 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE 118 (272)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCCGGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCchhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCC
Confidence 5799999999998743 35889999999999999999742112228999999999999988888899999999999999
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcccCc
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGWVP 226 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~~p 226 (495)
|++++..+..|..+++|++|+|++|++++..|..+..+++|+.|++++|++++.+ ..+..++ |+.|++++|.+++..|
T Consensus 119 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (272)
T 3rfs_A 119 NQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCH
Confidence 9999988888999999999999999999888888899999999999999999877 4467776 9999999999999888
Q ss_pred hhhhhcc-----cCCCCcCC
Q 040888 227 EELKDIA-----KTGGNSWS 241 (495)
Q Consensus 227 ~~l~~l~-----~~~~n~~~ 241 (495)
..+..++ .+.+|++.
T Consensus 199 ~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 199 GVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp TTTTTCTTCCEEECCSSCBC
T ss_pred HHHhCCcCCCEEEccCCCcc
Confidence 7776655 34455544
No 23
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.82 E-value=5e-20 Score=191.49 Aligned_cols=174 Identities=20% Similarity=0.248 Sum_probs=152.3
Q ss_pred CcccEEecC-----------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCc
Q 040888 60 HWKGITCSG-----------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQ 126 (495)
Q Consensus 60 ~w~gv~c~~-----------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~ 126 (495)
.|..|.|.. ..++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..+. ++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 577888864 3688999999999999899999999999999999999988787776 899999999999
Q ss_pred CCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cc
Q 040888 127 FSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NV 205 (495)
Q Consensus 127 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~ 205 (495)
+++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+++..|..|.++++|+.|+|++|++++.. ..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 99766677899999999999999999999999999999999999999999888889999999999999999998876 45
Q ss_pred cCCcc-CcEEEeecCCCcccCchhhhhcc
Q 040888 206 LGKLP-LDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 206 ~~~~~-L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
+..++ |+.|++++|.+++..+..+..+.
T Consensus 172 l~~l~~L~~L~l~~n~i~~~~~~~~~~l~ 200 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLY 200 (477)
T ss_dssp HTTCTTCCEEEEESCCCCEECTTCSCSCT
T ss_pred hcccCCCcEEeCCCCcCcEeChhhcccCc
Confidence 66666 88999999988887766665543
No 24
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.82 E-value=2.6e-20 Score=192.28 Aligned_cols=178 Identities=21% Similarity=0.257 Sum_probs=148.6
Q ss_pred CCCCCCCcccEEecC----------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCC-CC--CCCcEE
Q 040888 54 GDPCGEHWKGITCSG----------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQ-LP--PNLKHL 120 (495)
Q Consensus 54 ~~~C~~~w~gv~c~~----------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~--~~L~~L 120 (495)
.+.|.+.+..+.|+. .+++.|+|++|.+++..|..|+++++|++|+|++|.+.+.+|.. +. ++|++|
T Consensus 5 ~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 5 TSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIIL 84 (455)
T ss_dssp --CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEE
T ss_pred cceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEE
Confidence 345533344488874 35899999999999999999999999999999999998877643 44 899999
Q ss_pred ECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchh--hhCCCCCcEEEccCCcCCCcCccc-ccCCCCCCEEeccCC
Q 040888 121 DLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDM--FQKNEKLETLDLSKNQLTGELPRS-FASLSSLKKLYLQNN 197 (495)
Q Consensus 121 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~--~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~L~~L~l~~N 197 (495)
+|++|++++..|..|+++++|++|+|++|++++.+|.. +..+++|++|+|++|++++..|.. +.++++|++|++++|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n 164 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTC
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCC
Confidence 99999999989999999999999999999999876665 999999999999999999888876 899999999999999
Q ss_pred cccccc-cccCCc----------------------------------c-CcEEEeecCCCcccCchhhhh
Q 040888 198 QFTGSI-NVLGKL----------------------------------P-LDELNVENNKFSGWVPEELKD 231 (495)
Q Consensus 198 ~l~g~~-~~~~~~----------------------------------~-L~~l~l~~N~l~g~~p~~l~~ 231 (495)
++++.. ..+..+ + |+.|++++|.+++.+|..+..
T Consensus 165 ~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 234 (455)
T 3v47_A 165 KVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFD 234 (455)
T ss_dssp CBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHH
T ss_pred cccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhc
Confidence 998765 333222 2 777888888887777776654
No 25
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.82 E-value=7.3e-20 Score=176.21 Aligned_cols=174 Identities=20% Similarity=0.267 Sum_probs=149.6
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
.+++.|+|++|.+++..+..|.++++|++|+|++|.+.+..|..+. ++|++|+|++|++++..+..+..+++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 6899999999999988888999999999999999999987766665 89999999999999888778999999999999
Q ss_pred ccCcCCC-ccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCC----EEeccCCccccccc-ccCCccCcEEEeecCC
Q 040888 147 GSNQLNG-QLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLK----KLYLQNNQFTGSIN-VLGKLPLDELNVENNK 220 (495)
Q Consensus 147 ~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~----~L~l~~N~l~g~~~-~~~~~~L~~l~l~~N~ 220 (495)
++|++++ .+|..+..+++|+.|+|++|++++..+..+..+.+|+ .|++++|.+++... .+....|+.|++++|.
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~ 211 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQ 211 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSC
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCc
Confidence 9999987 4699999999999999999999988888887777777 89999999998773 4444459999999999
Q ss_pred CcccCchhhhhcc-----cCCCCcCCC
Q 040888 221 FSGWVPEELKDIA-----KTGGNSWSS 242 (495)
Q Consensus 221 l~g~~p~~l~~l~-----~~~~n~~~~ 242 (495)
+++..+..+..++ .+.+|++.|
T Consensus 212 l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 212 LKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred eeecCHhHhcccccccEEEccCCcccc
Confidence 9977666666554 345666554
No 26
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=1.7e-19 Score=167.71 Aligned_cols=150 Identities=23% Similarity=0.287 Sum_probs=135.9
Q ss_pred CCCCCCCcccEEecC-----------CCEeEEEcCCCCCccccc-cccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcE
Q 040888 54 GDPCGEHWKGITCSG-----------SSVTEIKLSGLGLNGQLG-YQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKH 119 (495)
Q Consensus 54 ~~~C~~~w~gv~c~~-----------~~v~~l~L~~n~l~g~~~-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~ 119 (495)
+..|.|.|..+.|+. ..++.|+|++|.+++..+ ..|.++++|+.|+|++|.+++..|..+. ++|++
T Consensus 6 P~~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~ 85 (220)
T 2v70_A 6 PEKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNE 85 (220)
T ss_dssp CTTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred CCCCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCE
Confidence 456778999999974 247899999999999865 4589999999999999999987775665 89999
Q ss_pred EECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcc
Q 040888 120 LDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQF 199 (495)
Q Consensus 120 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 199 (495)
|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.+
T Consensus 86 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 86 ILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp EECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE
T ss_pred EECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCC
Confidence 99999999998888899999999999999999999999999999999999999999999899999999999999999999
Q ss_pred cccc
Q 040888 200 TGSI 203 (495)
Q Consensus 200 ~g~~ 203 (495)
++..
T Consensus 166 ~c~c 169 (220)
T 2v70_A 166 NCNC 169 (220)
T ss_dssp ECSG
T ss_pred cCCC
Confidence 8654
No 27
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.82 E-value=1.5e-19 Score=186.63 Aligned_cols=179 Identities=20% Similarity=0.266 Sum_probs=148.2
Q ss_pred CCCCCC--CcccEEecC-----------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCc
Q 040888 54 GDPCGE--HWKGITCSG-----------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLK 118 (495)
Q Consensus 54 ~~~C~~--~w~gv~c~~-----------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~ 118 (495)
...|.| .|..|.|.. .+++.|+|++|++++..+..|.++++|+.|+|++|.+++..|..+. ++|+
T Consensus 47 p~~C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 126 (452)
T 3zyi_A 47 PSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLN 126 (452)
T ss_dssp CTTSEECSSSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred CCCCEECCCCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCC
Confidence 344544 467888864 3689999999999999999999999999999999999987777766 8999
Q ss_pred EEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCc-ccccCCCCCCEEeccCC
Q 040888 119 HLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELP-RSFASLSSLKKLYLQNN 197 (495)
Q Consensus 119 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N 197 (495)
+|+|++|++++..+..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|+..+.+| ..|.++++|+.|+|++|
T Consensus 127 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n 206 (452)
T 3zyi_A 127 TLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMC 206 (452)
T ss_dssp EEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCC
Confidence 99999999998777789999999999999999997777788889999999999854444444 46888888999999998
Q ss_pred cccccccccCCcc-CcEEEeecCCCcccCchhhhhcc
Q 040888 198 QFTGSINVLGKLP-LDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 198 ~l~g~~~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
++++.. .+..++ |+.|++++|.+++..|..|..++
T Consensus 207 ~l~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 242 (452)
T 3zyi_A 207 NIKDMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLS 242 (452)
T ss_dssp CCSSCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCT
T ss_pred cccccc-cccccccccEEECcCCcCcccCcccccCcc
Confidence 888653 445555 88888888888888888777665
No 28
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.81 E-value=1.1e-19 Score=186.98 Aligned_cols=180 Identities=19% Similarity=0.256 Sum_probs=120.7
Q ss_pred CcccEEecC-----------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCc
Q 040888 60 HWKGITCSG-----------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQ 126 (495)
Q Consensus 60 ~w~gv~c~~-----------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~ 126 (495)
.|..|.|.. ..++.|+|++|++++..+..|.++++|++|+|++|.+.+..+..+. ++|++|+|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 356777754 2467777777777777777777777777777777777654444443 667777777777
Q ss_pred CCCCcchhccCCCCCcEEEcccCcCCCccch-------------------------hhhCCCCCcEEEccCCcCCCcCcc
Q 040888 127 FSGTVPYSISQMSELKYLNLGSNQLNGQLSD-------------------------MFQKNEKLETLDLSKNQLTGELPR 181 (495)
Q Consensus 127 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~-------------------------~~~~l~~L~~L~ls~N~l~g~~p~ 181 (495)
|++..+..|..+++|++|+|++|+|+...+. .|.++++|++|+|++|+++ .+|
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~- 201 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP- 201 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-
Confidence 7655555566666666666666666544333 4555666666666666666 344
Q ss_pred cccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcccCchhhhhcc-----cCCCCcCC
Q 040888 182 SFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGWVPEELKDIA-----KTGGNSWS 241 (495)
Q Consensus 182 ~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l~-----~~~~n~~~ 241 (495)
.+..+++|+.|+|++|++++.. ..+..++ |+.|++++|.+++..|..|.+++ .+.+|.+.
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 3666777777888888877765 5566666 89999999999988887776655 34455544
No 29
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.81 E-value=4.5e-20 Score=180.43 Aligned_cols=161 Identities=24% Similarity=0.316 Sum_probs=77.3
Q ss_pred CCEeEEEcCCCCCcc--ccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcc-hhccCCCCCcE
Q 040888 69 SSVTEIKLSGLGLNG--QLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVP-YSISQMSELKY 143 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g--~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 143 (495)
.+++.|+|++|.++. ..+..+..+++|++|+|++|.+.+ +|..+. ++|++|+|++|++++..+ ..+..+++|++
T Consensus 52 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 130 (306)
T 2z66_A 52 TQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 130 (306)
T ss_dssp TTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCE
T ss_pred ccCCEEECCCCccCcccCcccccccccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCE
Confidence 345555555555542 223444445555555555555442 222221 455555555555543333 34445555555
Q ss_pred EEcccCcCCCccchhhhCCCCCcEEEccCCcCCC-cCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCC
Q 040888 144 LNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTG-ELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNK 220 (495)
Q Consensus 144 L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~ 220 (495)
|+|++|.+++..|..+..+++|++|++++|.+++ .+|..+..+++|+.|+|++|++++.. ..+..++ |+.|++++|.
T Consensus 131 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 210 (306)
T 2z66_A 131 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 210 (306)
T ss_dssp EECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCc
Confidence 5555555554444445555555555555555544 34444555555555555555555443 3333333 5555555555
Q ss_pred CcccCchhhh
Q 040888 221 FSGWVPEELK 230 (495)
Q Consensus 221 l~g~~p~~l~ 230 (495)
+++..+..+.
T Consensus 211 l~~~~~~~~~ 220 (306)
T 2z66_A 211 FFSLDTFPYK 220 (306)
T ss_dssp CSBCCSGGGT
T ss_pred cCccChhhcc
Confidence 5544443333
No 30
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.81 E-value=2.4e-19 Score=177.40 Aligned_cols=177 Identities=20% Similarity=0.284 Sum_probs=111.1
Q ss_pred CCCCCCCcccEEecC-----------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEE
Q 040888 54 GDPCGEHWKGITCSG-----------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHL 120 (495)
Q Consensus 54 ~~~C~~~w~gv~c~~-----------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L 120 (495)
+..|.|.|..+.|+. .+++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..+. ++|++|
T Consensus 28 p~~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 107 (332)
T 2ft3_A 28 PFGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKL 107 (332)
T ss_dssp CSSCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEE
T ss_pred CCCCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEE
Confidence 345656899999863 2577888888888877777777777788888877777766565554 666666
Q ss_pred ECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCC--CcCcccccCC------------
Q 040888 121 DLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLT--GELPRSFASL------------ 186 (495)
Q Consensus 121 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~--g~~p~~~~~l------------ 186 (495)
+|++|+++ .+|..+. ++|++|+|++|++++..+..|..+++|+.|++++|.++ +..|..+..+
T Consensus 108 ~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l 184 (332)
T 2ft3_A 108 YISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKL 184 (332)
T ss_dssp ECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBC
T ss_pred ECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCC
Confidence 66666666 4444433 55666666666666555555555666666666666553 2333333322
Q ss_pred --------CCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcccCchhhhhcc
Q 040888 187 --------SSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 187 --------~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
++|+.|++++|.+++.. ..+..++ |+.|++++|.+++..|..+..++
T Consensus 185 ~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 241 (332)
T 2ft3_A 185 TGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLP 241 (332)
T ss_dssp SSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCT
T ss_pred CccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCC
Confidence 35556666666666555 4455555 77777777777766665665544
No 31
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.81 E-value=4.6e-19 Score=175.14 Aligned_cols=184 Identities=20% Similarity=0.276 Sum_probs=150.0
Q ss_pred CCCCCCCCCCCCCCCcccEEecC-----------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC
Q 040888 46 LSNWKAGGGDPCGEHWKGITCSG-----------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP 114 (495)
Q Consensus 46 l~~w~~~~~~~C~~~w~gv~c~~-----------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 114 (495)
+..|.......|.|.|+.+.|+. ..++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..+.
T Consensus 18 i~~~~~~cp~~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (330)
T 1xku_A 18 IEPMGPVCPFRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFA 97 (330)
T ss_dssp ----CCCCCTTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTT
T ss_pred cccccCCCCCCCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhc
Confidence 34565444456767899999974 3688999999999998888999999999999999999988787776
Q ss_pred --CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCC--cCcccccCCCCCC
Q 040888 115 --PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTG--ELPRSFASLSSLK 190 (495)
Q Consensus 115 --~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g--~~p~~~~~l~~L~ 190 (495)
++|++|+|++|+++ .+|..+. ++|++|++++|++++..+..+..+++|+.|++++|.++. ..+..+.++++|+
T Consensus 98 ~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~ 174 (330)
T 1xku_A 98 PLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLS 174 (330)
T ss_dssp TCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCC
T ss_pred CCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcC
Confidence 89999999999998 6676654 789999999999998888889999999999999999863 6778888999999
Q ss_pred EEeccCCcccccccccCCccCcEEEeecCCCcccCchhhhhcc
Q 040888 191 KLYLQNNQFTGSINVLGKLPLDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 191 ~L~l~~N~l~g~~~~~~~~~L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
.|++++|.++.....+. ..|+.|++++|.+++..|..+..++
T Consensus 175 ~L~l~~n~l~~l~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~ 216 (330)
T 1xku_A 175 YIRIADTNITTIPQGLP-PSLTELHLDGNKITKVDAASLKGLN 216 (330)
T ss_dssp EEECCSSCCCSCCSSCC-TTCSEEECTTSCCCEECTGGGTTCT
T ss_pred EEECCCCccccCCcccc-ccCCEEECCCCcCCccCHHHhcCCC
Confidence 99999999886553332 2388899999998888887777655
No 32
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.81 E-value=8e-20 Score=166.23 Aligned_cols=129 Identities=29% Similarity=0.445 Sum_probs=102.9
Q ss_pred eEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCC-CC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 72 TEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQ-LP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 72 ~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
+.+++++|++ +.+|..+.. +|++|+|++|.+++..+.. +. ++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 3455566666 356655543 7888899998888665543 33 7888888888888888888888888888888888
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI 203 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 203 (495)
|+|++..|..|..+++|++|+|++|+|++.+|..|..+++|++|+|++|.+++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 8888888888888888888888888888888888888888888888888888654
No 33
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=7.4e-20 Score=183.34 Aligned_cols=165 Identities=28% Similarity=0.353 Sum_probs=88.9
Q ss_pred CCCCCCCcccEEecCCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC---CCCcEEECcCCcCCCC
Q 040888 54 GDPCGEHWKGITCSGSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP---PNLKHLDLSENQFSGT 130 (495)
Q Consensus 54 ~~~C~~~w~gv~c~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~---~~L~~L~Ls~N~l~g~ 130 (495)
+..|.|.+..+.| ++++|+. +|..+. +.++.|+|++|+|++..+..+. ++|++|+|++|+|++.
T Consensus 13 p~~C~C~~~~l~c----------~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i 79 (361)
T 2xot_A 13 PANCLCASNILSC----------SKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFI 79 (361)
T ss_dssp CTTCEEETTEEEC----------CSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEE
T ss_pred CCCCEECCCEEEe----------CCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCcc
Confidence 3446555555555 4444443 333332 2355666666666544443331 5566666666666655
Q ss_pred cchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCccccccc-cc---
Q 040888 131 VPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSIN-VL--- 206 (495)
Q Consensus 131 ~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~-~~--- 206 (495)
.|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++... .+
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~ 159 (361)
T 2xot_A 80 SSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDG 159 (361)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC--
T ss_pred ChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCc
Confidence 55556666666666666666665555555666666666666666665555556666666666666666655442 22
Q ss_pred CCcc-CcEEEeecCCCcccCchhhhh
Q 040888 207 GKLP-LDELNVENNKFSGWVPEELKD 231 (495)
Q Consensus 207 ~~~~-L~~l~l~~N~l~g~~p~~l~~ 231 (495)
..++ |+.|+|++|.|++..+..+..
T Consensus 160 ~~l~~L~~L~L~~N~l~~l~~~~~~~ 185 (361)
T 2xot_A 160 NKLPKLMLLDLSSNKLKKLPLTDLQK 185 (361)
T ss_dssp --CTTCCEEECCSSCCCCCCHHHHHH
T ss_pred ccCCcCCEEECCCCCCCccCHHHhhh
Confidence 2233 566666666665544444443
No 34
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.81 E-value=5.9e-19 Score=169.41 Aligned_cols=158 Identities=27% Similarity=0.331 Sum_probs=141.5
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
.+++.|+|++|.++...+..|.++++|++|+|++|.+.+..+..+. ++|++|+|++|++++..|..|..+++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 6899999999999977777789999999999999999965554444 89999999999999988888999999999999
Q ss_pred ccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCccc
Q 040888 147 GSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGW 224 (495)
Q Consensus 147 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~ 224 (495)
++|.|++..+..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++.. ..+..++ |+.|++++|++...
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 999999888888999999999999999999887778999999999999999999877 4566666 99999999999765
Q ss_pred Cc
Q 040888 225 VP 226 (495)
Q Consensus 225 ~p 226 (495)
.+
T Consensus 221 c~ 222 (270)
T 2o6q_A 221 CN 222 (270)
T ss_dssp SS
T ss_pred Cc
Confidence 43
No 35
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.80 E-value=3.5e-19 Score=183.77 Aligned_cols=103 Identities=21% Similarity=0.280 Sum_probs=85.8
Q ss_pred CCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEe
Q 040888 139 SELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNV 216 (495)
Q Consensus 139 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l 216 (495)
++|+.|+|++|++++.+|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|.+++.. ..+..++ |+.|++
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 46777777888888888889999999999999999999888889999999999999999998776 5667776 999999
Q ss_pred ecCCCcccCchhhhhcc-----cCCCCcCC
Q 040888 217 ENNKFSGWVPEELKDIA-----KTGGNSWS 241 (495)
Q Consensus 217 ~~N~l~g~~p~~l~~l~-----~~~~n~~~ 241 (495)
++|.+++..|..+..++ .+.+|.+.
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 384 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLK 384 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcccccChhhccccccccEEECCCCccc
Confidence 99999988888887765 34455554
No 36
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.80 E-value=1.6e-19 Score=180.26 Aligned_cols=168 Identities=22% Similarity=0.271 Sum_probs=144.9
Q ss_pred CCcccEEecC-------------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECc
Q 040888 59 EHWKGITCSG-------------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLS 123 (495)
Q Consensus 59 ~~w~gv~c~~-------------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls 123 (495)
|.|.|+ |+. .+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..+. ++|++|+|+
T Consensus 30 C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 30 CDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108 (353)
T ss_dssp ECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECC
Confidence 378887 653 3699999999999988777899999999999999999987776665 899999999
Q ss_pred CCcCCCCcchhccCCCCCcEEEcccCcCCCccc-hhhhCCCCCcEEEccCCc-CCCcCcccccCCCCCCEEeccCCcccc
Q 040888 124 ENQFSGTVPYSISQMSELKYLNLGSNQLNGQLS-DMFQKNEKLETLDLSKNQ-LTGELPRSFASLSSLKKLYLQNNQFTG 201 (495)
Q Consensus 124 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l~~L~~L~l~~N~l~g 201 (495)
+|++++..+..+.++++|++|+|++|++++..+ ..+..+++|++|++++|+ +++..|..+.++++|+.|++++|++++
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 188 (353)
T 2z80_A 109 YNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQS 188 (353)
T ss_dssp SSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCc
Confidence 999997666669999999999999999996544 478999999999999994 776677889999999999999999998
Q ss_pred cc-cccCCcc-CcEEEeecCCCcccCchh
Q 040888 202 SI-NVLGKLP-LDELNVENNKFSGWVPEE 228 (495)
Q Consensus 202 ~~-~~~~~~~-L~~l~l~~N~l~g~~p~~ 228 (495)
.. ..+..++ |+.|++++|.++. +|..
T Consensus 189 ~~~~~l~~l~~L~~L~l~~n~l~~-~~~~ 216 (353)
T 2z80_A 189 YEPKSLKSIQNVSHLILHMKQHIL-LLEI 216 (353)
T ss_dssp ECTTTTTTCSEEEEEEEECSCSTT-HHHH
T ss_pred cCHHHHhccccCCeecCCCCcccc-chhh
Confidence 76 6777777 9999999999864 4443
No 37
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.80 E-value=1.4e-19 Score=170.35 Aligned_cols=176 Identities=22% Similarity=0.324 Sum_probs=146.5
Q ss_pred CCCCCCc-cc--EEecC--------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCC-CCCCCCCCCC--CCCcEE
Q 040888 55 DPCGEHW-KG--ITCSG--------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNN-LKDSIPYQLP--PNLKHL 120 (495)
Q Consensus 55 ~~C~~~w-~g--v~c~~--------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~--~~L~~L 120 (495)
+.|.|.+ .+ |.|.. ..++.|+|++|++++..+..|.++++|++|+|++|. +++..+..+. ++|++|
T Consensus 6 ~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L 85 (239)
T 2xwt_C 6 PPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHI 85 (239)
T ss_dssp SSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEE
T ss_pred CCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEE
Confidence 4565543 44 45853 479999999999999888899999999999999997 7754444443 899999
Q ss_pred ECcC-CcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCc---EEEccCC-cCCCcCcccccCCCCCC-EEec
Q 040888 121 DLSE-NQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLE---TLDLSKN-QLTGELPRSFASLSSLK-KLYL 194 (495)
Q Consensus 121 ~Ls~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~---~L~ls~N-~l~g~~p~~~~~l~~L~-~L~l 194 (495)
+|++ |++++..+..|.++++|++|+|++|++++ +|. +..+++|+ +|++++| ++++..+..|..+++|+ .|++
T Consensus 86 ~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l 163 (239)
T 2xwt_C 86 EIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKL 163 (239)
T ss_dssp EEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEEC
T ss_pred ECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEc
Confidence 9999 99997777889999999999999999997 676 88888888 9999999 99977777899999999 9999
Q ss_pred cCCccccccc-ccCCccCcEEEeecCC-CcccCchhhhhc
Q 040888 195 QNNQFTGSIN-VLGKLPLDELNVENNK-FSGWVPEELKDI 232 (495)
Q Consensus 195 ~~N~l~g~~~-~~~~~~L~~l~l~~N~-l~g~~p~~l~~l 232 (495)
++|+++.... .+....|+.|++++|. +++..+..+..+
T Consensus 164 ~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l 203 (239)
T 2xwt_C 164 YNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGV 203 (239)
T ss_dssp CSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTC
T ss_pred CCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhcc
Confidence 9999985443 3444349999999995 987777777766
No 38
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.80 E-value=3.2e-19 Score=190.67 Aligned_cols=131 Identities=21% Similarity=0.292 Sum_probs=70.9
Q ss_pred EeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 71 VTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 71 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
++.+++++|.+....+..+.++++|++|+|++|.+.+..|..+. ++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 53 l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 132 (597)
T 3oja_B 53 QKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 132 (597)
T ss_dssp CSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeC
Confidence 45555555555544444455555555555555555544443433 4555555555555555555555555555555555
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccc
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTG 201 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 201 (495)
|.|++..+..|.++++|++|+|++|.+++..|..|..+++|+.|+|++|.+++
T Consensus 133 n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 133 NDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 55554444444555555555555555555555555555555555555555543
No 39
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.80 E-value=2.7e-19 Score=194.22 Aligned_cols=177 Identities=26% Similarity=0.335 Sum_probs=153.9
Q ss_pred CCCCcccEEecC-----------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECc
Q 040888 57 CGEHWKGITCSG-----------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLS 123 (495)
Q Consensus 57 C~~~w~gv~c~~-----------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls 123 (495)
|.+.+.-+.|+. .+++.|+|++|.+++..+..|.++++|++|||++|.+++..|..+. ++|++|+|+
T Consensus 2 C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 81 (680)
T 1ziw_A 2 CTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 81 (680)
T ss_dssp --CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECC
T ss_pred ceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECC
Confidence 444566666753 4799999999999998888999999999999999999988887665 899999999
Q ss_pred CCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc
Q 040888 124 ENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI 203 (495)
Q Consensus 124 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 203 (495)
+|++++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..+.++++|++|++++|.+++..
T Consensus 82 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred CCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccC
Confidence 99999766668999999999999999999888889999999999999999999999999999999999999999999877
Q ss_pred -cccC--Cc-cCcEEEeecCCCcccCchhhhhcc
Q 040888 204 -NVLG--KL-PLDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 204 -~~~~--~~-~L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
..+. .. .|+.|++++|.+++..|..+..+.
T Consensus 162 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~ 195 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSSNQIKEFSPGCFHAIG 195 (680)
T ss_dssp HHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSS
T ss_pred HHHhhccccccccEEECCCCcccccChhhhhhhh
Confidence 3332 22 399999999999999888776543
No 40
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.80 E-value=7.5e-20 Score=179.51 Aligned_cols=171 Identities=20% Similarity=0.224 Sum_probs=123.7
Q ss_pred CCEeEEEcCCCCCcccccccc--CCCCCCcEEECcCCCCCCCCCCCCC-------CCCcEEECcCCcCCCCcchhccCCC
Q 040888 69 SSVTEIKLSGLGLNGQLGYQL--TNLKSVSYLDVSNNNLKDSIPYQLP-------PNLKHLDLSENQFSGTVPYSISQMS 139 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~--~~l~~L~~L~Ls~N~l~g~~p~~~~-------~~L~~L~Ls~N~l~g~~p~~~~~l~ 139 (495)
.+++.|+|++|.++|.+|..+ ..+++|++|+|++|.+++. |..+. ++|++|+|++|++++..|..++.++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 568888888888888888776 7888888888888888875 54332 6788888888888877778888888
Q ss_pred CCcEEEcccCcCCCc--cchhh--hCCCCCcEEEccCCcCCC--cCc-ccccCCCCCCEEeccCCcccccc--cccCCcc
Q 040888 140 ELKYLNLGSNQLNGQ--LSDMF--QKNEKLETLDLSKNQLTG--ELP-RSFASLSSLKKLYLQNNQFTGSI--NVLGKLP 210 (495)
Q Consensus 140 ~L~~L~L~~N~l~g~--~p~~~--~~l~~L~~L~ls~N~l~g--~~p-~~~~~l~~L~~L~l~~N~l~g~~--~~~~~~~ 210 (495)
+|++|+|++|++.|. +|..+ ..+++|++|+|++|++++ .++ ..+.++++|+.|+|++|++++.+ ..+..++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 888888888888765 33344 777888888888888873 222 33457788888888888888765 3444444
Q ss_pred -CcEEEeecCCCcccCchhhh-hcc--cCCCCcCC
Q 040888 211 -LDELNVENNKFSGWVPEELK-DIA--KTGGNSWS 241 (495)
Q Consensus 211 -L~~l~l~~N~l~g~~p~~l~-~l~--~~~~n~~~ 241 (495)
|+.|++++|.++ .+|..+. ++. .+.+|.+.
T Consensus 254 ~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~l~ 287 (312)
T 1wwl_A 254 QLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNRLD 287 (312)
T ss_dssp TCCEEECTTSCCS-SCCSSCCSEEEEEECCSSCCC
T ss_pred CCCEEECCCCccC-hhhhhccCCceEEECCCCCCC
Confidence 888888888887 6666554 333 44555554
No 41
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=5.4e-19 Score=164.34 Aligned_cols=133 Identities=24% Similarity=0.311 Sum_probs=96.4
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
..++.|+|++|++++..+..|..+++|+.|+|++|.+++..|..+. ++|++|+|++|+|+...+..|..+++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 4577777777777776666777777777777777777766666555 67777777777777555555677777777777
Q ss_pred ccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccc
Q 040888 147 GSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTG 201 (495)
Q Consensus 147 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 201 (495)
++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 7777777777777777777777777777776666667777777777777777653
No 42
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.80 E-value=4e-20 Score=199.05 Aligned_cols=152 Identities=20% Similarity=0.329 Sum_probs=137.9
Q ss_pred CCccccccccCCCCCCcEEECcCCCCCCC-----------------CCCCCC----CCCcEEECcCCcCCCCcchhccCC
Q 040888 80 GLNGQLGYQLTNLKSVSYLDVSNNNLKDS-----------------IPYQLP----PNLKHLDLSENQFSGTVPYSISQM 138 (495)
Q Consensus 80 ~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~----~~L~~L~Ls~N~l~g~~p~~~~~l 138 (495)
+++| +|..++++++|++|+|++|.++|. +|..+. ++|++|+|++|++.|.+|..++++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 4446 889999999999999999999996 888876 899999999999999999999999
Q ss_pred CCCcEEEcccCc-CCC-ccchhhhCC------CCCcEEEccCCcCCCcCcc--cccCCCCCCEEeccCCcccccccccCC
Q 040888 139 SELKYLNLGSNQ-LNG-QLSDMFQKN------EKLETLDLSKNQLTGELPR--SFASLSSLKKLYLQNNQFTGSINVLGK 208 (495)
Q Consensus 139 ~~L~~L~L~~N~-l~g-~~p~~~~~l------~~L~~L~ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~g~~~~~~~ 208 (495)
++|++|+|++|+ ++| .+|..++.+ ++|++|+|++|+++ .+|. .++++++|+.|+|++|+++|.++.+..
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~ 351 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGS 351 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCC
Confidence 999999999998 999 999998887 99999999999999 8998 999999999999999999988876666
Q ss_pred cc-CcEEEeecCCCcccCchhhhhccc
Q 040888 209 LP-LDELNVENNKFSGWVPEELKDIAK 234 (495)
Q Consensus 209 ~~-L~~l~l~~N~l~g~~p~~l~~l~~ 234 (495)
++ |+.|++++|.++ .+|..+..+..
T Consensus 352 l~~L~~L~L~~N~l~-~lp~~l~~l~~ 377 (636)
T 4eco_A 352 EIKLASLNLAYNQIT-EIPANFCGFTE 377 (636)
T ss_dssp EEEESEEECCSSEEE-ECCTTSEEECT
T ss_pred CCCCCEEECCCCccc-cccHhhhhhcc
Confidence 66 999999999999 88887776553
No 43
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=1.1e-18 Score=163.26 Aligned_cols=134 Identities=23% Similarity=0.227 Sum_probs=114.8
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
.+++.|+|++|.+++..|..|.++++|++|+|++|.|.+..+..+. ++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 5789999999999998888899999999999999999754444343 88999999999999777777889999999999
Q ss_pred ccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc
Q 040888 147 GSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI 203 (495)
Q Consensus 147 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 203 (495)
++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++..
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 999998 77888889999999999999999777777888999999999999988654
No 44
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.79 E-value=2.9e-19 Score=191.25 Aligned_cols=159 Identities=23% Similarity=0.214 Sum_probs=136.2
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
.+++.|+|++|.+++..+..|.++++|++|||++|.+++..|..+. ++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 4689999999999999998999999999999999999987787775 89999999999999988999999999999999
Q ss_pred ccCcCCCccchhhhCCCCCcEEEccCCcCCC-cCcccccCCCCCCEEeccCCcccccc-cccCCcc-----CcEEEeecC
Q 040888 147 GSNQLNGQLSDMFQKNEKLETLDLSKNQLTG-ELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-----LDELNVENN 219 (495)
Q Consensus 147 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-----L~~l~l~~N 219 (495)
++|++++..+..++++++|++|+|++|.+++ .+|..++++++|++|+|++|++++.. ..+..+. +..+++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 9999998888889999999999999999986 67999999999999999999998765 3333322 235666666
Q ss_pred CCcccCch
Q 040888 220 KFSGWVPE 227 (495)
Q Consensus 220 ~l~g~~p~ 227 (495)
.+++..+.
T Consensus 192 ~l~~~~~~ 199 (606)
T 3vq2_A 192 PIDFIQDQ 199 (606)
T ss_dssp CCCEECTT
T ss_pred CcceeCcc
Confidence 65544433
No 45
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.79 E-value=2.6e-19 Score=189.33 Aligned_cols=162 Identities=22% Similarity=0.303 Sum_probs=142.0
Q ss_pred CcccEEecC-------------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcC
Q 040888 60 HWKGITCSG-------------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSE 124 (495)
Q Consensus 60 ~w~gv~c~~-------------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~ 124 (495)
.|.|+ |+. .+++.|+|++|.+++..|..|.++++|++|+|++|++++..|..+. ++|++|+|++
T Consensus 5 ~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 5 DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 78888 864 2699999999999999999999999999999999999987777776 8999999999
Q ss_pred CcCCCCcchhccCCCCCcEEEcccCcCCC-ccchhhhCCCCCcEEEccCCcCCCcCc-ccccCCCCCCEEeccCCccccc
Q 040888 125 NQFSGTVPYSISQMSELKYLNLGSNQLNG-QLSDMFQKNEKLETLDLSKNQLTGELP-RSFASLSSLKKLYLQNNQFTGS 202 (495)
Q Consensus 125 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~ 202 (495)
|++++..|..++++++|++|+|++|++++ .+|..+.++++|++|++++|.+.+.+| ..+.++++|++|++++|.+++.
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 163 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc
Confidence 99998888889999999999999999987 467889999999999999999655665 6899999999999999999986
Q ss_pred c-cccCCcc-CcEEEeecCCCc
Q 040888 203 I-NVLGKLP-LDELNVENNKFS 222 (495)
Q Consensus 203 ~-~~~~~~~-L~~l~l~~N~l~ 222 (495)
+ ..+..++ |+.|+++.|.+.
T Consensus 164 ~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 164 QSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp CTTTTTTCSEEEEEEEECSBST
T ss_pred ChhhhhccccCceEecccCccc
Confidence 6 5666666 777888777764
No 46
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.79 E-value=7e-19 Score=188.29 Aligned_cols=164 Identities=22% Similarity=0.283 Sum_probs=85.9
Q ss_pred CEeEEEcCCCCCcccc--ccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchh-ccCCCCCcEE
Q 040888 70 SVTEIKLSGLGLNGQL--GYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYS-ISQMSELKYL 144 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~--~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L 144 (495)
+++.|+|++|.+++.. +..+.++++|++|+|++|.+.+..|..+. ++|++|+|++|.+++..|.. +..+++|++|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 4555555555555544 44555555555555555555544444443 45555555555555444332 4555555555
Q ss_pred EcccCcCCCccchhhhCCCCCcEEEccCCcCCCc---CcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecC
Q 040888 145 NLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGE---LPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENN 219 (495)
Q Consensus 145 ~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~---~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N 219 (495)
+|++|.+++..|..+..+++|+.|++++|++++. .+..+..+++|+.|+|++|++++.+ ..+..++ |+.|++++|
T Consensus 431 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 510 (606)
T 3t6q_A 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHN 510 (606)
T ss_dssp ECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred ECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCC
Confidence 5555555555555555555555555555555541 2234555555555555555555443 3344444 555555555
Q ss_pred CCcccCchhhhhcc
Q 040888 220 KFSGWVPEELKDIA 233 (495)
Q Consensus 220 ~l~g~~p~~l~~l~ 233 (495)
++++..|..+..+.
T Consensus 511 ~l~~~~~~~l~~l~ 524 (606)
T 3t6q_A 511 RLTSSSIEALSHLK 524 (606)
T ss_dssp CCCGGGGGGGTTCC
T ss_pred ccCcCChhHhCccc
Confidence 55555555554443
No 47
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.79 E-value=2.5e-19 Score=175.81 Aligned_cols=170 Identities=21% Similarity=0.264 Sum_probs=140.5
Q ss_pred CCCEeEEEcCCCCCccccccccCCC-----CCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCC--cchhc--c
Q 040888 68 GSSVTEIKLSGLGLNGQLGYQLTNL-----KSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGT--VPYSI--S 136 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~--~p~~~--~ 136 (495)
..+++.|+|++|.+++. |..++.+ ++|++|+|++|++.+..|..+. ++|++|+|++|++.|. +|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 46899999999999998 8778777 9999999999999988777776 8999999999999876 34555 8
Q ss_pred CCCCCcEEEcccCcCCC--ccc-hhhhCCCCCcEEEccCCcCCCcCc-ccccCCCCCCEEeccCCcccccccccCCccCc
Q 040888 137 QMSELKYLNLGSNQLNG--QLS-DMFQKNEKLETLDLSKNQLTGELP-RSFASLSSLKKLYLQNNQFTGSINVLGKLPLD 212 (495)
Q Consensus 137 ~l~~L~~L~L~~N~l~g--~~p-~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~L~ 212 (495)
.+++|++|+|++|+|++ .++ ..+..+++|+.|+|++|++++.+| ..+..+++|++|+|++|+++..+..+. ..|+
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~-~~L~ 277 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP-AKLS 277 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSSCC-SEEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhhcc-CCce
Confidence 99999999999999994 233 455788999999999999998876 566778999999999999995445444 3499
Q ss_pred EEEeecCCCcccCchhhhhcc-----cCCCCcCC
Q 040888 213 ELNVENNKFSGWVPEELKDIA-----KTGGNSWS 241 (495)
Q Consensus 213 ~l~l~~N~l~g~~p~~l~~l~-----~~~~n~~~ 241 (495)
.|++++|++++. |. +..++ .+.+|.+.
T Consensus 278 ~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 278 VLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp EEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred EEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 999999999987 65 65554 44555543
No 48
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.78 E-value=3.9e-19 Score=190.25 Aligned_cols=164 Identities=21% Similarity=0.265 Sum_probs=120.0
Q ss_pred CCEeEEEcCCCCCccc--cccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcc-hhccCCCCCcE
Q 040888 69 SSVTEIKLSGLGLNGQ--LGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVP-YSISQMSELKY 143 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~--~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 143 (495)
.+++.|+|++|.+++. +|..+..+++|++|+|++|.+.+ +|..+. ++|+.|+|++|++++..| ..+..+++|++
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 5678888888888766 36777777788888888777764 444443 677777777777777666 56777777777
Q ss_pred EEcccCcCCCccchhhhCCCCCcEEEccCCcCCC-cCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCC
Q 040888 144 LNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTG-ELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNK 220 (495)
Q Consensus 144 L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~ 220 (495)
|++++|.+++.+|..+..+++|++|++++|.+++ .+|..+..+++|+.|+|++|++++.+ ..+..++ |+.|++++|.
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 508 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNN 508 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCc
Confidence 7777777777777777777777777777777776 36777777777777777777777765 4456665 7777777777
Q ss_pred CcccCchhhhhcc
Q 040888 221 FSGWVPEELKDIA 233 (495)
Q Consensus 221 l~g~~p~~l~~l~ 233 (495)
+++.+|..+..++
T Consensus 509 l~~~~~~~~~~l~ 521 (606)
T 3vq2_A 509 LLFLDSSHYNQLY 521 (606)
T ss_dssp CSCEEGGGTTTCT
T ss_pred CCCcCHHHccCCC
Confidence 7777777766654
No 49
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.78 E-value=5.5e-19 Score=189.59 Aligned_cols=159 Identities=21% Similarity=0.220 Sum_probs=133.7
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcc
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
.++.|+|++|.|++..+..|.++++|++|||++|+|++..|..+. ++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 689999999999988888999999999999999999976666665 899999999999998777889999999999999
Q ss_pred cCcCCCccchhhhCCCCCcEEEccCCcCCC-cCcccccCCCCCCEEeccCCcccccc-cccCC---cc--CcEEEeecCC
Q 040888 148 SNQLNGQLSDMFQKNEKLETLDLSKNQLTG-ELPRSFASLSSLKKLYLQNNQFTGSI-NVLGK---LP--LDELNVENNK 220 (495)
Q Consensus 148 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~---~~--L~~l~l~~N~ 220 (495)
+|+|++..+..|+++++|++|+|++|.+++ .+|..++.+++|++|+|++|++++.. ..+.. +. ...++++.|.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 999998878889999999999999999976 46888899999999999999998765 33322 22 4567777777
Q ss_pred CcccCchh
Q 040888 221 FSGWVPEE 228 (495)
Q Consensus 221 l~g~~p~~ 228 (495)
++...|..
T Consensus 213 l~~i~~~~ 220 (635)
T 4g8a_A 213 MNFIQPGA 220 (635)
T ss_dssp CCEECTTT
T ss_pred ccccCccc
Confidence 76544443
No 50
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.78 E-value=1.1e-18 Score=180.17 Aligned_cols=171 Identities=20% Similarity=0.235 Sum_probs=139.5
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
.+++.|+|++|.+++..+..|.++++|++|+|++|.+++..+..+. ++|++|+|++|+++...+..|.++++|+.|+|
T Consensus 99 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 178 (452)
T 3zyi_A 99 HHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 178 (452)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeC
Confidence 6799999999999999999999999999999999999965555454 89999999999999777778889999999999
Q ss_pred ccCcCCCccc-hhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcc
Q 040888 147 GSNQLNGQLS-DMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 147 ~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g 223 (495)
++|+..+.++ ..|..+++|++|+|++|++++. | .+..+++|+.|+|++|++++.. ..+..++ |+.|++++|.+++
T Consensus 179 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 179 GELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp CCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred CCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 9855444444 4688888999999999998853 4 4788888999999999888876 5667776 8888998888888
Q ss_pred cCchhhhhcc-----cCCCCcCC
Q 040888 224 WVPEELKDIA-----KTGGNSWS 241 (495)
Q Consensus 224 ~~p~~l~~l~-----~~~~n~~~ 241 (495)
..|..|..++ .+.+|.+.
T Consensus 257 ~~~~~~~~l~~L~~L~L~~N~l~ 279 (452)
T 3zyi_A 257 IERNAFDGLASLVELNLAHNNLS 279 (452)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCS
T ss_pred ECHHHhcCCCCCCEEECCCCcCC
Confidence 8887776655 34455543
No 51
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.78 E-value=3.4e-18 Score=165.85 Aligned_cols=154 Identities=25% Similarity=0.247 Sum_probs=136.3
Q ss_pred CCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 68 GSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
..+++.|+|++|.+++..+. +.+++|++|+|++|.+. .+|..+. ++|++|+|++|+|++..|..|..+++|++|+
T Consensus 54 l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp CTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 36899999999999976543 89999999999999998 6776655 8999999999999988888999999999999
Q ss_pred cccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCccc
Q 040888 146 LGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGW 224 (495)
Q Consensus 146 L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~ 224 (495)
|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+++..+..+.... |+.+++++|++...
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 99999998888889999999999999999997766678899999999999999997665554444 99999999998753
No 52
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.78 E-value=3.2e-19 Score=185.85 Aligned_cols=163 Identities=22% Similarity=0.230 Sum_probs=123.3
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+++.|+|++|.+++..| ++.+++|++|||++|.+++..+. ++|++|+|++|.|++..+. .+++|+.|+|++
T Consensus 58 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~---~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~ 129 (487)
T 3oja_A 58 TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG---PSIETLHAANNNISRVSCS---RGQGKKNIYLAN 129 (487)
T ss_dssp TTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC---TTCCEEECCSSCCCCEEEC---CCSSCEEEECCS
T ss_pred CCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC---CCcCEEECcCCcCCCCCcc---ccCCCCEEECCC
Confidence 456666666666666554 66666666666666666543221 6777777777777765553 467899999999
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCccccc-CCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccCc
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFA-SLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWVP 226 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~p 226 (495)
|.|++..|..+..+++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.|++..... .++ |+.|+|++|.+++..|
T Consensus 130 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~-~l~~L~~L~Ls~N~l~~~~~ 208 (487)
T 3oja_A 130 NKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQV-VFAKLKTLDLSSNKLAFMGP 208 (487)
T ss_dssp SCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCC-CCTTCCEEECCSSCCCEECG
T ss_pred CCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccc-cCCCCCEEECCCCCCCCCCH
Confidence 999999999999999999999999999998888886 7999999999999999875433 344 9999999999998655
Q ss_pred hhhhhcc-----cCCCCcCC
Q 040888 227 EELKDIA-----KTGGNSWS 241 (495)
Q Consensus 227 ~~l~~l~-----~~~~n~~~ 241 (495)
. +..++ .+.+|.+.
T Consensus 209 ~-~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 209 E-FQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp G-GGGGTTCSEEECTTSCCC
T ss_pred h-HcCCCCccEEEecCCcCc
Confidence 4 66554 44555554
No 53
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=2.3e-19 Score=197.61 Aligned_cols=147 Identities=19% Similarity=0.326 Sum_probs=134.5
Q ss_pred cccccCCCCCCcEEECcCCCCCC-----------------CCCCCCC----CCCcEEECcCCcCCCCcchhccCCCCCcE
Q 040888 85 LGYQLTNLKSVSYLDVSNNNLKD-----------------SIPYQLP----PNLKHLDLSENQFSGTVPYSISQMSELKY 143 (495)
Q Consensus 85 ~~~~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~----~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 143 (495)
+|..|+++++|+.|+|++|.|+| .+|..+. ++|++|+|++|++.|.+|..++++++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 88899999999999999999999 3888874 89999999999999999999999999999
Q ss_pred EEcccCc-CCC-ccchhhhCCC-------CCcEEEccCCcCCCcCcc--cccCCCCCCEEeccCCcccccccccCCcc-C
Q 040888 144 LNLGSNQ-LNG-QLSDMFQKNE-------KLETLDLSKNQLTGELPR--SFASLSSLKKLYLQNNQFTGSINVLGKLP-L 211 (495)
Q Consensus 144 L~L~~N~-l~g-~~p~~~~~l~-------~L~~L~ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L 211 (495)
|+|++|+ |+| .+|..++.++ +|+.|+|++|+++ .+|. .++++++|+.|+|++|+++ .++.++.++ |
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L 597 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKL 597 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcc
Confidence 9999998 999 8998887766 9999999999999 8998 9999999999999999999 556777777 9
Q ss_pred cEEEeecCCCcccCchhhhhccc
Q 040888 212 DELNVENNKFSGWVPEELKDIAK 234 (495)
Q Consensus 212 ~~l~l~~N~l~g~~p~~l~~l~~ 234 (495)
+.|++++|.++ .+|..+..+..
T Consensus 598 ~~L~Ls~N~l~-~lp~~l~~l~~ 619 (876)
T 4ecn_A 598 TDLKLDYNQIE-EIPEDFCAFTD 619 (876)
T ss_dssp SEEECCSSCCS-CCCTTSCEECT
T ss_pred eEEECcCCccc-cchHHHhhccc
Confidence 99999999999 88987776553
No 54
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.78 E-value=1.1e-18 Score=176.59 Aligned_cols=132 Identities=20% Similarity=0.292 Sum_probs=91.8
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcc
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
.++.|+++++.++...+..+.++++|++|+|++|.+.+..|..+. ++|++|+|++|.+++..|..+.++++|++|+|+
T Consensus 46 ~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 125 (390)
T 3o6n_A 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 125 (390)
T ss_dssp CCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECC
Confidence 466677777776655444566777777777777777655554444 677777777777777666667777777777777
Q ss_pred cCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccc
Q 040888 148 SNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTG 201 (495)
Q Consensus 148 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 201 (495)
+|+++...+..|..+++|++|++++|.+++..|..+..+++|+.|++++|++++
T Consensus 126 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 126 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 777775444556677777777777777776666667777777777777777664
No 55
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.78 E-value=5.3e-18 Score=167.53 Aligned_cols=162 Identities=22% Similarity=0.310 Sum_probs=144.4
Q ss_pred CCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcc
Q 040888 68 GSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
..+++.|+|++|.+++..|..|.++++|++|+|++|.++ .+|..+.++|++|+|++|.+++..+..+.++++|+.|+|+
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 153 (330)
T 1xku_A 75 LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELG 153 (330)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECC
T ss_pred CCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhcccccEEECCCCcccccCHhHhcCCccccEEECC
Confidence 368999999999999999999999999999999999998 6888888999999999999998888889999999999999
Q ss_pred cCcCCC--ccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcc
Q 040888 148 SNQLNG--QLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 148 ~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g 223 (495)
+|.++. ..+..+..+++|+.|++++|.++ .+|..+. ++|+.|++++|++++.. ..+..++ |+.|++++|.+++
T Consensus 154 ~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp SSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred CCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 999964 77888999999999999999998 4666554 78999999999999876 5677776 9999999999998
Q ss_pred cCchhhhhcc
Q 040888 224 WVPEELKDIA 233 (495)
Q Consensus 224 ~~p~~l~~l~ 233 (495)
..|..+..++
T Consensus 231 ~~~~~~~~l~ 240 (330)
T 1xku_A 231 VDNGSLANTP 240 (330)
T ss_dssp ECTTTGGGST
T ss_pred eChhhccCCC
Confidence 8887777665
No 56
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.78 E-value=9.4e-19 Score=187.30 Aligned_cols=171 Identities=19% Similarity=0.160 Sum_probs=150.8
Q ss_pred cccEEecC-----------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcC
Q 040888 61 WKGITCSG-----------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQF 127 (495)
Q Consensus 61 w~gv~c~~-----------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l 127 (495)
+..+.|.. ..++.|+|++|.+++..|..|+++++|++|+|++|.+.+..|..+. ++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 55677853 3689999999999999999999999999999999999988887776 8999999999999
Q ss_pred CCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-ccc
Q 040888 128 SGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVL 206 (495)
Q Consensus 128 ~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~ 206 (495)
++..|..|+++++|++|+|++|++++..|..+.++++|++|+|++|.+++..++.+..+++|+.|++++|.+++.. ..+
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 9999999999999999999999999887888999999999999999999854445556999999999999999876 556
Q ss_pred CCcc-Cc--EEEeecCCCcccCchhhhh
Q 040888 207 GKLP-LD--ELNVENNKFSGWVPEELKD 231 (495)
Q Consensus 207 ~~~~-L~--~l~l~~N~l~g~~p~~l~~ 231 (495)
..++ |+ .|++++|.+++..|..+..
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~~~~~~~~~ 201 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAGIEPGAFDS 201 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCEECTTTTTT
T ss_pred hhhcccceeEEecCCCccCccChhHhhh
Confidence 6665 77 8999999999988876643
No 57
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=1.9e-18 Score=172.98 Aligned_cols=156 Identities=26% Similarity=0.241 Sum_probs=135.7
Q ss_pred CCEeEEEcCCCCCccccccccC-CCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLT-NLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|..+. ++|++|+|++|+|++..+..|.++++|++|+
T Consensus 39 ~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 4588999999999998888888 999999999999999977666665 8999999999999987788899999999999
Q ss_pred cccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccc---cCCCCCCEEeccCCcccccc-cccCCcc---CcEEEeec
Q 040888 146 LGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSF---ASLSSLKKLYLQNNQFTGSI-NVLGKLP---LDELNVEN 218 (495)
Q Consensus 146 L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~---~~l~~L~~L~l~~N~l~g~~-~~~~~~~---L~~l~l~~ 218 (495)
|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++.. ..+..++ ++.|++++
T Consensus 119 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~ 198 (361)
T 2xot_A 119 LYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCS
T ss_pred CCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecC
Confidence 99999999999999999999999999999996544445 67999999999999999766 4455554 58899999
Q ss_pred CCCccc
Q 040888 219 NKFSGW 224 (495)
Q Consensus 219 N~l~g~ 224 (495)
|++...
T Consensus 199 N~~~C~ 204 (361)
T 2xot_A 199 NPLECD 204 (361)
T ss_dssp SCEECC
T ss_pred CCccCC
Confidence 999854
No 58
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.77 E-value=4.2e-18 Score=182.03 Aligned_cols=108 Identities=25% Similarity=0.307 Sum_probs=69.4
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
.+++.|+|++|.+++..|..|+++++|++|+|++|.+++..|..+. ++|++|+|++|.|++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 3577777777777777666777777777777777777765554443 56666666666666444444566666666666
Q ss_pred ccCcCCCccchhhhCCCCCcEEEccCCcCC
Q 040888 147 GSNQLNGQLSDMFQKNEKLETLDLSKNQLT 176 (495)
Q Consensus 147 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 176 (495)
++|.|++..|..|..+++|+.|+|++|.++
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 666666655555555555555555555544
No 59
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=1.1e-18 Score=159.19 Aligned_cols=151 Identities=19% Similarity=0.285 Sum_probs=128.1
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+++.|+|++|.++ .+| .+..+++|++|+|++|.+...-+..-.++|++|+|++|++++..|..++.+++|++|+|++
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~ 121 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISH 121 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCS
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecC
Confidence 57999999999998 555 6999999999999999776432222238999999999999998899999999999999999
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcc
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g 223 (495)
|++++..|..+..+++|++|++++|.+.+.+| .+..+++|+.|++++|++++.. .+..++ |+.|++++|++.+
T Consensus 122 n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 122 SAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp SBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC----
T ss_pred CccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCcccCC
Confidence 99999899999999999999999999434666 6899999999999999998754 555666 9999999999864
No 60
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.77 E-value=7.9e-18 Score=154.89 Aligned_cols=152 Identities=27% Similarity=0.360 Sum_probs=132.0
Q ss_pred eEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccC
Q 040888 72 TEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSN 149 (495)
Q Consensus 72 ~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 149 (495)
+.++.++++++.. |..+ .++|++|+|++|++++..+..+. ++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 5788889888754 4333 46899999999999966555454 89999999999999777777899999999999999
Q ss_pred cCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcccCc
Q 040888 150 QLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGWVP 226 (495)
Q Consensus 150 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~~p 226 (495)
+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++.+ ..+..++ |+.|++++|.+.+..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 999888888999999999999999999887778899999999999999999877 4467676 9999999999998876
No 61
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=3e-18 Score=155.76 Aligned_cols=130 Identities=26% Similarity=0.399 Sum_probs=120.6
Q ss_pred cEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcch-hccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCc
Q 040888 96 SYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPY-SISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQ 174 (495)
Q Consensus 96 ~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 174 (495)
+.|++++|.++ .+|..++.+|++|+|++|+|++..+. .+..+++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred CEEEcCCCCcC-cCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCc
Confidence 78999999995 78988889999999999999977665 48999999999999999999999999999999999999999
Q ss_pred CCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcccCc
Q 040888 175 LTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGWVP 226 (495)
Q Consensus 175 l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~~p 226 (495)
|++..|..|..+++|++|+|++|++++.+ ..+..++ |+.|++++|.+++..+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99999988999999999999999999987 6677777 9999999999998776
No 62
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.76 E-value=1.4e-18 Score=183.08 Aligned_cols=167 Identities=26% Similarity=0.415 Sum_probs=99.1
Q ss_pred CCCCCCCCCCCCC---CcccE-EecCCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEEC
Q 040888 47 SNWKAGGGDPCGE---HWKGI-TCSGSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDL 122 (495)
Q Consensus 47 ~~w~~~~~~~C~~---~w~gv-~c~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~L 122 (495)
.+|.. +.++|.. .|.|+ .|...+++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| .+.++|++|+|
T Consensus 34 ~~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip-~~l~~L~~L~L 107 (571)
T 3cvr_A 34 DKWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP-ELPASLEYLDA 107 (571)
T ss_dssp HHHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC-CCCTTCCEEEC
T ss_pred HHHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc-cccCCCCEEEc
Confidence 35654 4567753 58999 7887789999999999887 666553 66777777777776 566 45566777777
Q ss_pred cCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCC-------------------cCcccc
Q 040888 123 SENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTG-------------------ELPRSF 183 (495)
Q Consensus 123 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-------------------~~p~~~ 183 (495)
++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|+.|+|++|.|++ .+|. |
T Consensus 108 s~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~~l~~L~~L~Ls~N~L~~lp~-l 178 (571)
T 3cvr_A 108 CDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPELPTSLEVLSVRNNQLTFLPE-L 178 (571)
T ss_dssp CSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCC-C
T ss_pred cCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCCcCCCcCEEECCCCCCCCcch-h
Confidence 7776665 555 443 55566666655554 343 34445555555555443 1333 3
Q ss_pred cCCCCCCEEeccCCcccccccccCCccC-------cEEEeecCCCcccCchhhhhcc
Q 040888 184 ASLSSLKKLYLQNNQFTGSINVLGKLPL-------DELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 184 ~~l~~L~~L~l~~N~l~g~~~~~~~~~L-------~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
. ++|+.|+|++|+|+..+. +.. .| +.|+|++|.|+ .+|..+..++
T Consensus 179 ~--~~L~~L~Ls~N~L~~lp~-~~~-~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~ 230 (571)
T 3cvr_A 179 P--ESLEALDVSTNLLESLPA-VPV-RNHHSEETEIFFRCRENRIT-HIPENILSLD 230 (571)
T ss_dssp C--TTCCEEECCSSCCSSCCC-CC---------CCEEEECCSSCCC-CCCGGGGGSC
T ss_pred h--CCCCEEECcCCCCCchhh-HHH-hhhcccccceEEecCCCcce-ecCHHHhcCC
Confidence 3 455555555555553223 222 34 66666666666 3566555444
No 63
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=5e-20 Score=200.66 Aligned_cols=200 Identities=21% Similarity=0.194 Sum_probs=88.5
Q ss_pred hHHHHHHHHHHHcCCCC--CCCCCCCCCCCCCCCCCcccEEecCCCEeEEEcCCCCCccc--------------------
Q 040888 27 SQDASALNVMYTSLHSP--SQLSNWKAGGGDPCGEHWKGITCSGSSVTEIKLSGLGLNGQ-------------------- 84 (495)
Q Consensus 27 ~~~~~~L~~~~~~~~~~--~~l~~w~~~~~~~C~~~w~gv~c~~~~v~~l~L~~n~l~g~-------------------- 84 (495)
..+..+|+.++.+.... ..-..|.......+ .|.+..++.++++.|+|.+|++...
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~ 208 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSG--TATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDD 208 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccc--cCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCccc
Confidence 45567788887664221 11235643323333 6888888777777777666555432
Q ss_pred -------cccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCcc
Q 040888 85 -------LGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQL 155 (495)
Q Consensus 85 -------~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~ 155 (495)
.+..+..++.|+.|+|++|.+. .+|..+. ++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+ .+
T Consensus 209 ~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 209 IENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred cccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 2344555666666666666665 4444433 56666666666666 55666666666666666666666 55
Q ss_pred chhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc--CcEEEeecCCCcccCchhhhhc
Q 040888 156 SDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP--LDELNVENNKFSGWVPEELKDI 232 (495)
Q Consensus 156 p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~--L~~l~l~~N~l~g~~p~~l~~l 232 (495)
|..|+.+++|++|+|++|.|+ .+|..|+++++|+.|+|++|.|++.+ ..+..+. +..++|++|.++|.+|..+..+
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l 364 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFI 364 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccccee
Confidence 666666666666666666665 55555666666666666666666555 2222222 2234556666666666555443
No 64
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.76 E-value=1.1e-18 Score=193.78 Aligned_cols=169 Identities=22% Similarity=0.214 Sum_probs=137.8
Q ss_pred CcccEEecCCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCC-CCCCC--CCCcEEECcCCcCCCCcchhcc
Q 040888 60 HWKGITCSGSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSI-PYQLP--PNLKHLDLSENQFSGTVPYSIS 136 (495)
Q Consensus 60 ~w~gv~c~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~--~~L~~L~Ls~N~l~g~~p~~~~ 136 (495)
.|+.|.+-..+++.|+|++|.+++..|..|.++++|++|||++|.+.+.+ |..+. ++|++|+|++|.+++..|..|.
T Consensus 15 ~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~ 94 (844)
T 3j0a_A 15 NLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQ 94 (844)
T ss_dssp CSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSC
T ss_pred CCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHcc
Confidence 56666664468999999999999999999999999999999999887777 44554 8999999999999988899999
Q ss_pred CCCCCcEEEcccCcCCCccchh--hhCCCCCcEEEccCCcCCCcCc-ccccCCCCCCEEeccCCcccccc-cccCCc---
Q 040888 137 QMSELKYLNLGSNQLNGQLSDM--FQKNEKLETLDLSKNQLTGELP-RSFASLSSLKKLYLQNNQFTGSI-NVLGKL--- 209 (495)
Q Consensus 137 ~l~~L~~L~L~~N~l~g~~p~~--~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~--- 209 (495)
++++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++.. ..+..+
T Consensus 95 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~ 174 (844)
T 3j0a_A 95 GLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGK 174 (844)
T ss_dssp SCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHC
T ss_pred CCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCC
Confidence 9999999999999999877765 8899999999999999988755 57899999999999999988755 333332
Q ss_pred cCcEEEeecCCCcccCchh
Q 040888 210 PLDELNVENNKFSGWVPEE 228 (495)
Q Consensus 210 ~L~~l~l~~N~l~g~~p~~ 228 (495)
.|+.|++++|.+++.+|..
T Consensus 175 ~L~~L~L~~n~l~~~~~~~ 193 (844)
T 3j0a_A 175 TLSFFSLAANSLYSRVSVD 193 (844)
T ss_dssp SSCCCEECCSBSCCCCCCC
T ss_pred ccceEECCCCccccccccc
Confidence 2566666666666555543
No 65
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.75 E-value=4.7e-18 Score=180.35 Aligned_cols=162 Identities=25% Similarity=0.362 Sum_probs=116.0
Q ss_pred CEeEEEcCCCCCcccccccc-----CCCCC--------------------------CcEEECcCCCCCCCCCCCCCCCCc
Q 040888 70 SVTEIKLSGLGLNGQLGYQL-----TNLKS--------------------------VSYLDVSNNNLKDSIPYQLPPNLK 118 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~-----~~l~~--------------------------L~~L~Ls~N~l~g~~p~~~~~~L~ 118 (495)
+++.|++++|.++|.+|..+ .+++. |+.|++++|.+.........++|+
T Consensus 277 ~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~ 356 (562)
T 3a79_B 277 PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFT 356 (562)
T ss_dssp SEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCC
T ss_pred cccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCce
Confidence 78999999999999888776 44433 555555555554222112337888
Q ss_pred EEECcCCcCCCCcchhccCCCCCcEEEcccCcCCC--ccchhhhCCCCCcEEEccCCcCCCcCcc-cccCCCCCCEEecc
Q 040888 119 HLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNG--QLSDMFQKNEKLETLDLSKNQLTGELPR-SFASLSSLKKLYLQ 195 (495)
Q Consensus 119 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~L~l~ 195 (495)
+|+|++|++++.+|..+.++++|++|+|++|++++ .+|..+..+++|+.|++++|++++.+|. .+..+++|+.|+|+
T Consensus 357 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~ 436 (562)
T 3a79_B 357 FLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436 (562)
T ss_dssp EEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECC
T ss_pred EEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECC
Confidence 88888888888788888888888888888888886 4456677888888888888888875554 47778888888888
Q ss_pred CCcccccc-cccCCccCcEEEeecCCCcccCchhhhhcc
Q 040888 196 NNQFTGSI-NVLGKLPLDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 196 ~N~l~g~~-~~~~~~~L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
+|++++.+ ..+. ..|+.|++++|.++ .+|..+..++
T Consensus 437 ~n~l~~~~~~~l~-~~L~~L~L~~N~l~-~ip~~~~~l~ 473 (562)
T 3a79_B 437 SNMLTGSVFRCLP-PKVKVLDLHNNRIM-SIPKDVTHLQ 473 (562)
T ss_dssp SSCCCGGGGSSCC-TTCSEEECCSSCCC-CCCTTTTSSC
T ss_pred CCCCCcchhhhhc-CcCCEEECCCCcCc-ccChhhcCCC
Confidence 88887655 2222 23788888888887 5676655544
No 66
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.75 E-value=1.5e-17 Score=168.15 Aligned_cols=106 Identities=25% Similarity=0.306 Sum_probs=46.1
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcc
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
+++.|+|++|.+++..+..|.++++|++|+|++|.+.+..|..+. ++|++|+|++|.++...+..|.++++|++|+|+
T Consensus 70 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 149 (390)
T 3o6n_A 70 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 149 (390)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECC
Confidence 444455555554444444444444444444444444443333332 444444444444442222223444444444444
Q ss_pred cCcCCCccchhhhCCCCCcEEEccCCcC
Q 040888 148 SNQLNGQLSDMFQKNEKLETLDLSKNQL 175 (495)
Q Consensus 148 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l 175 (495)
+|.+++..|..+..+++|+.|++++|.+
T Consensus 150 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l 177 (390)
T 3o6n_A 150 NNNLERIEDDTFQATTSLQNLQLSSNRL 177 (390)
T ss_dssp SSCCCBCCTTTTSSCTTCCEEECCSSCC
T ss_pred CCccCccChhhccCCCCCCEEECCCCcC
Confidence 4444444343444444444444444433
No 67
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.75 E-value=1.1e-18 Score=170.96 Aligned_cols=171 Identities=19% Similarity=0.216 Sum_probs=130.2
Q ss_pred CCEeEEEcCCCCCcccccccc--CCCCCCcEEECcCCCCCCCCCC------CCCCCCcEEECcCCcCCCCcchhccCCCC
Q 040888 69 SSVTEIKLSGLGLNGQLGYQL--TNLKSVSYLDVSNNNLKDSIPY------QLPPNLKHLDLSENQFSGTVPYSISQMSE 140 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~--~~l~~L~~L~Ls~N~l~g~~p~------~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~ 140 (495)
.+++.|+|++|.+++..|..+ ..+++|++|+|++|.+++..|. ...++|++|+|++|++++..|..++.+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 469999999999999999888 8999999999999999876552 12379999999999999888889999999
Q ss_pred CcEEEcccCcCCCc--cc--hhhhCCCCCcEEEccCCcCCCcCcc----cccCCCCCCEEeccCCcccccc-cccCCc--
Q 040888 141 LKYLNLGSNQLNGQ--LS--DMFQKNEKLETLDLSKNQLTGELPR----SFASLSSLKKLYLQNNQFTGSI-NVLGKL-- 209 (495)
Q Consensus 141 L~~L~L~~N~l~g~--~p--~~~~~l~~L~~L~ls~N~l~g~~p~----~~~~l~~L~~L~l~~N~l~g~~-~~~~~~-- 209 (495)
|++|+|++|++.+. ++ ..+..+++|++|+|++|+++. +|. .+.++++|++|+|++|++++.. ..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 99999999998763 22 234678888888888888873 232 2467788888888888888774 444443
Q ss_pred -c-CcEEEeecCCCcccCchhhh-hcc--cCCCCcCC
Q 040888 210 -P-LDELNVENNKFSGWVPEELK-DIA--KTGGNSWS 241 (495)
Q Consensus 210 -~-L~~l~l~~N~l~g~~p~~l~-~l~--~~~~n~~~ 241 (495)
+ |+.|++++|.++ .+|..+. ++. .+..|.+.
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLN 285 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCC
T ss_pred cCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCC
Confidence 3 888888888888 5666543 222 44555554
No 68
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.75 E-value=1.2e-17 Score=181.34 Aligned_cols=175 Identities=19% Similarity=0.216 Sum_probs=110.2
Q ss_pred CCEeEEEcCCCCCccccc-cccCCCCCCcEEECcCCCCCCC--------------------------CCCCCC--CCCcE
Q 040888 69 SSVTEIKLSGLGLNGQLG-YQLTNLKSVSYLDVSNNNLKDS--------------------------IPYQLP--PNLKH 119 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~-~~~~~l~~L~~L~Ls~N~l~g~--------------------------~p~~~~--~~L~~ 119 (495)
.+++.|+|++|.+++.+| ..+.++++|++|+|++|.+.+. +|..+. ++|+.
T Consensus 405 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~ 484 (680)
T 1ziw_A 405 GHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI 484 (680)
T ss_dssp TTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCE
T ss_pred CCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCE
Confidence 467788888888877665 5677777777777777765543 333333 56666
Q ss_pred EECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccc--------hhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCE
Q 040888 120 LDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLS--------DMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKK 191 (495)
Q Consensus 120 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p--------~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 191 (495)
|+|++|++++..|..+.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+++...+..|.++++|+.
T Consensus 485 L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~ 564 (680)
T 1ziw_A 485 LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKI 564 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred EECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcce
Confidence 6666666666555566666666666666666654321 12566666777777777776333345677777777
Q ss_pred EeccCCcccccc-cccCCcc-CcEEEeecCCCcccCchhhh-hcc-----cCCCCcCCCC
Q 040888 192 LYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGWVPEELK-DIA-----KTGGNSWSSS 243 (495)
Q Consensus 192 L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~~p~~l~-~l~-----~~~~n~~~~~ 243 (495)
|+|++|++++.+ ..+..++ |+.|++++|.+++..|..+. .++ .+.+|+|.|.
T Consensus 565 L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 565 IDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred eECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 777777777655 3344554 77777777777776666444 222 4456666553
No 69
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.75 E-value=4.1e-18 Score=178.93 Aligned_cols=169 Identities=26% Similarity=0.383 Sum_probs=139.7
Q ss_pred CCEeEEEcCCCCCcccccccc-----CCCCCCcEEECcCCCCCCCCCC----------------------------CCCC
Q 040888 69 SSVTEIKLSGLGLNGQLGYQL-----TNLKSVSYLDVSNNNLKDSIPY----------------------------QLPP 115 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~-----~~l~~L~~L~Ls~N~l~g~~p~----------------------------~~~~ 115 (495)
.+++.|+|++|.++|.+|..+ +++++|+.+++++|.+ .+|. .-.+
T Consensus 247 ~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~ 324 (520)
T 2z7x_B 247 TTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKIS 324 (520)
T ss_dssp SSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCC
T ss_pred CcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCC
Confidence 378899999999999999888 7787777777777766 3331 2337
Q ss_pred CCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCC--ccchhhhCCCCCcEEEccCCcCCCcCccc-ccCCCCCCEE
Q 040888 116 NLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNG--QLSDMFQKNEKLETLDLSKNQLTGELPRS-FASLSSLKKL 192 (495)
Q Consensus 116 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~L~~L 192 (495)
+|++|+|++|++++.+|..+..+++|++|+|++|++++ .+|..+..+++|++|++++|.+++.+|.. +..+++|+.|
T Consensus 325 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L 404 (520)
T 2z7x_B 325 PFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSL 404 (520)
T ss_dssp CCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEE
T ss_pred cccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEE
Confidence 99999999999999999999999999999999999997 67788999999999999999999867764 8889999999
Q ss_pred eccCCcccccc-cccCCccCcEEEeecCCCcccCchhhhhcc-----cCCCCcCC
Q 040888 193 YLQNNQFTGSI-NVLGKLPLDELNVENNKFSGWVPEELKDIA-----KTGGNSWS 241 (495)
Q Consensus 193 ~l~~N~l~g~~-~~~~~~~L~~l~l~~N~l~g~~p~~l~~l~-----~~~~n~~~ 241 (495)
++++|++++.+ ..+. ..|+.|++++|.++ .+|..+..++ .+.+|.+.
T Consensus 405 ~Ls~N~l~~~~~~~l~-~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 405 NMSSNILTDTIFRCLP-PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp ECCSSCCCGGGGGSCC-TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC
T ss_pred ECcCCCCCcchhhhhc-ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC
Confidence 99999998876 3332 34999999999999 7888777665 34555554
No 70
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.75 E-value=5.8e-18 Score=175.90 Aligned_cols=152 Identities=24% Similarity=0.246 Sum_probs=119.6
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
.+++.|+|++|.+++..|..|.++++|++|+|++|.+++..+..+. ++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 5789999999999988888999999999999999998854444443 78999999999998888888888889999999
Q ss_pred ccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCC
Q 040888 147 GSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNK 220 (495)
Q Consensus 147 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~ 220 (495)
++|.+++..|..|..+++|+.|+|++|++++..+..+.++++|+.|+|++|.+++.. ..+..++ |+.|++++|.
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~ 211 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWP 211 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCT
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCc
Confidence 988888888888888888888888888888766667788888888888888777654 2333333 4444444433
No 71
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.75 E-value=4.7e-18 Score=188.82 Aligned_cols=83 Identities=22% Similarity=0.263 Sum_probs=51.7
Q ss_pred hCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCccCcEEEeecCCCcccCchhhhhcc--cCCC
Q 040888 160 QKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLPLDELNVENNKFSGWVPEELKDIA--KTGG 237 (495)
Q Consensus 160 ~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~L~~l~l~~N~l~g~~p~~l~~l~--~~~~ 237 (495)
..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++......|+.|++++|+|++.+|..+.++. .+.+
T Consensus 477 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~ 556 (844)
T 3j0a_A 477 EGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITH 556 (844)
T ss_dssp SCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEE
T ss_pred cCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecC
Confidence 34445555555555555555555666677777777777776655322223377777888888877777766655 4566
Q ss_pred CcCCC
Q 040888 238 NSWSS 242 (495)
Q Consensus 238 n~~~~ 242 (495)
|+|.|
T Consensus 557 Np~~C 561 (844)
T 3j0a_A 557 NKFIC 561 (844)
T ss_dssp ECCCC
T ss_pred CCccc
Confidence 77765
No 72
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.74 E-value=1.6e-17 Score=148.74 Aligned_cols=135 Identities=26% Similarity=0.368 Sum_probs=82.1
Q ss_pred CCCCCCcccEEecCCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcc
Q 040888 55 DPCGEHWKGITCSGSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVP 132 (495)
Q Consensus 55 ~~C~~~w~gv~c~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p 132 (495)
+.|.|.|.++.|+..+ ++. +|..+ .++|+.|+|++|++++..+..+. ++|++|+|++|++++..+
T Consensus 3 ~~C~C~~~~l~~~~~~----------l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSKG----------LTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPD 69 (177)
T ss_dssp TTCEEETTEEECCSSC----------CSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CCCEeCCCEEEecCCC----------Ccc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeCh
Confidence 4566678877776433 322 23222 24667777777777654443333 566667776666665555
Q ss_pred hhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCccccc
Q 040888 133 YSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGS 202 (495)
Q Consensus 133 ~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 202 (495)
..+..+++|++|+|++|+|++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|.+++.
T Consensus 70 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 70 GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 5566666666666666666666555666666666666666666654444456666666666666666544
No 73
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.74 E-value=1.2e-17 Score=179.10 Aligned_cols=152 Identities=23% Similarity=0.269 Sum_probs=132.0
Q ss_pred CCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccc
Q 040888 79 LGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLS 156 (495)
Q Consensus 79 n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 156 (495)
.+|+ .+|..+. +++++|||++|+|++..|..+. ++|++|||++|+|++..|..|.++++|++|+|++|+|++..+
T Consensus 41 ~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~ 117 (635)
T 4g8a_A 41 LNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLAL 117 (635)
T ss_dssp SCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECG
T ss_pred CCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCH
Confidence 3444 3555442 4799999999999976666665 899999999999998888889999999999999999998888
Q ss_pred hhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc--cccCCcc-CcEEEeecCCCcccCchhhhhcc
Q 040888 157 DMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI--NVLGKLP-LDELNVENNKFSGWVPEELKDIA 233 (495)
Q Consensus 157 ~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~--~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l~ 233 (495)
..|.++++|++|+|++|+|++..+..|+++++|++|+|++|.+++.. ..+..++ |+.|++++|.+++..|..+..+.
T Consensus 118 ~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 197 (635)
T 4g8a_A 118 GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH 197 (635)
T ss_dssp GGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHH
T ss_pred HHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchh
Confidence 89999999999999999999887788999999999999999998643 5566666 99999999999999998887654
No 74
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.74 E-value=9.2e-18 Score=178.07 Aligned_cols=163 Identities=21% Similarity=0.222 Sum_probs=142.0
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
.+++.|+|++|.+++..+..|.++++|++|||++|++++..|..+. ++|++|+|++|++++..|..|.++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 3689999999999998888999999999999999999976666665 89999999999999888889999999999999
Q ss_pred ccCcCCCccchhhhCCCCCcEEEccCCcCCC-cCcccccCCCCCCEEeccCCcccccc-cccCCcc-C----cEEEeecC
Q 040888 147 GSNQLNGQLSDMFQKNEKLETLDLSKNQLTG-ELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-L----DELNVENN 219 (495)
Q Consensus 147 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L----~~l~l~~N 219 (495)
++|++++..+..++++++|++|++++|.+++ .+|..|+++++|+.|++++|++++.. ..+..+. | ..+++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999997766679999999999999999987 57999999999999999999998765 3444443 4 78999999
Q ss_pred CCcccCchhhhh
Q 040888 220 KFSGWVPEELKD 231 (495)
Q Consensus 220 ~l~g~~p~~l~~ 231 (495)
.+++..|..+..
T Consensus 188 ~l~~~~~~~~~~ 199 (570)
T 2z63_A 188 PMNFIQPGAFKE 199 (570)
T ss_dssp CCCEECTTTTTT
T ss_pred CceecCHHHhcc
Confidence 998877766553
No 75
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.74 E-value=2.3e-18 Score=171.87 Aligned_cols=159 Identities=19% Similarity=0.258 Sum_probs=136.0
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcc-hhccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVP-YSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~ 145 (495)
.+++.|+|++|.+++..+..|.++++|++|+|++|.+++..+..+. ++|++|+|++|++++..+ ..+..+++|++|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~ 155 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILR 155 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEE
Confidence 6899999999999998889999999999999999999964433233 899999999999995444 4789999999999
Q ss_pred cccCc-CCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCccccccc-ccCCcc-CcEEEeecCCCc
Q 040888 146 LGSNQ-LNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSIN-VLGKLP-LDELNVENNKFS 222 (495)
Q Consensus 146 L~~N~-l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~-~~~~~~-L~~l~l~~N~l~ 222 (495)
+++|+ +++..+..+..+++|+.|++++|.+++..|..+..+++|++|++++|+++.... .+..++ |+.|++++|.++
T Consensus 156 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 156 VGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCT
T ss_pred CCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccc
Confidence 99994 777777889999999999999999999999999999999999999999876553 333344 899999999998
Q ss_pred ccCch
Q 040888 223 GWVPE 227 (495)
Q Consensus 223 g~~p~ 227 (495)
+..+.
T Consensus 236 ~~~~~ 240 (353)
T 2z80_A 236 TFHFS 240 (353)
T ss_dssp TCCCC
T ss_pred ccccc
Confidence 75443
No 76
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.73 E-value=7.1e-18 Score=177.13 Aligned_cols=149 Identities=26% Similarity=0.318 Sum_probs=74.0
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCC--CcchhccCCCCCcEEE
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSG--TVPYSISQMSELKYLN 145 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~ 145 (495)
+++.|++++|++.+... +..+++|++|+|++|.+++.+|..+. ++|++|+|++|++++ .+|..+..+++|++|+
T Consensus 303 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHMLC--PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CCSEEEEESSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred ceeEEEcCCCccccccc--hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 35555555555443221 13455555555555555554554443 455555555555554 3444455555555555
Q ss_pred cccCcCCCccchh-hhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCc
Q 040888 146 LGSNQLNGQLSDM-FQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFS 222 (495)
Q Consensus 146 L~~N~l~g~~p~~-~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~ 222 (495)
|++|++++.+|.. +..+++|+.|++++|++++.+|..+. ++|+.|+|++|+++..+..+..++ |+.|++++|+++
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCC
Confidence 5555555534432 44455555555555555555444433 455555555555553333333333 555555555555
No 77
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.73 E-value=7e-18 Score=178.98 Aligned_cols=173 Identities=22% Similarity=0.295 Sum_probs=116.0
Q ss_pred CCEeEEEcCCCCCcccc--ccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcc-hhccCCCCCcE
Q 040888 69 SSVTEIKLSGLGLNGQL--GYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVP-YSISQMSELKY 143 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~--~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 143 (495)
.+++.|+|++|.+++.. +..+.++++|++|+|++|.+.+..+. +. ++|++|+|++|.+++..| ..+.++++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 56777788777777654 56677777777777777776643332 32 677777777777766555 45667777777
Q ss_pred EEcccCcCCCccchhhhCCCCCcEEEccCCcCC-CcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCC
Q 040888 144 LNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLT-GELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNK 220 (495)
Q Consensus 144 L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~ 220 (495)
|+|++|.+++.+|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++.+ ..+..++ |+.|++++|.
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 777777777777777777777777777777776 466777777777777777777777664 4555555 7777777777
Q ss_pred CcccCchhhhhcc-----cCCCCcCCC
Q 040888 221 FSGWVPEELKDIA-----KTGGNSWSS 242 (495)
Q Consensus 221 l~g~~p~~l~~l~-----~~~~n~~~~ 242 (495)
+++..|..+..++ .+.+|++.|
T Consensus 506 l~~~~~~~~~~l~~L~~L~l~~N~~~~ 532 (570)
T 2z63_A 506 LKSVPDGIFDRLTSLQKIWLHTNPWDC 532 (570)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCCHHHhhcccCCcEEEecCCcccC
Confidence 7776666555544 344555544
No 78
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.73 E-value=2.4e-17 Score=163.01 Aligned_cols=158 Identities=22% Similarity=0.306 Sum_probs=105.6
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCC--CCCCCCC-CCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKD--SIPYQLP-PNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
.+++.|+|++|.+++..+..|.++++|+.|+|++|.++. ..|..+. .+|++|++++|++++ +|..+. ++|+.|+
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~-l~~~~~--~~L~~L~ 199 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG-IPKDLP--ETLNELH 199 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSS-CCSSSC--SSCSCCB
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCc-cCcccc--CCCCEEE
Confidence 478899999999987777778999999999999998853 4444443 366666777666664 444433 5666666
Q ss_pred cccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCccc
Q 040888 146 LGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGW 224 (495)
Q Consensus 146 L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~ 224 (495)
|++|.+++..+..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|+++..+..+..++ |+.|++++|.+++.
T Consensus 200 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l~~~ 279 (332)
T 2ft3_A 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKV 279 (332)
T ss_dssp CCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSCCCBC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCCCCcc
Confidence 66666666666666666666666666666666655566666666666666666664434444444 66666666666655
Q ss_pred Cchhh
Q 040888 225 VPEEL 229 (495)
Q Consensus 225 ~p~~l 229 (495)
.+..+
T Consensus 280 ~~~~~ 284 (332)
T 2ft3_A 280 GVNDF 284 (332)
T ss_dssp CTTSS
T ss_pred ChhHc
Confidence 44444
No 79
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.73 E-value=3.9e-18 Score=167.62 Aligned_cols=164 Identities=22% Similarity=0.223 Sum_probs=125.9
Q ss_pred CCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcc
Q 040888 68 GSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
..+++.|+|++|.+++..+ +..+++|++|+|++|.+++..+ .++|++|+|++|++++..+. .+++|+.|+|+
T Consensus 57 l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~---~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~ 128 (317)
T 3o53_A 57 FTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV---GPSIETLHAANNNISRVSCS---RGQGKKNIYLA 128 (317)
T ss_dssp CTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEE---CTTCCEEECCSSCCSEEEEC---CCSSCEEEECC
T ss_pred CCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccC---CCCcCEEECCCCccCCcCcc---ccCCCCEEECC
Confidence 3578888888888887665 8888888888888888875332 27888888888888865544 36789999999
Q ss_pred cCcCCCccchhhhCCCCCcEEEccCCcCCCcCccccc-CCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccC
Q 040888 148 SNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFA-SLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWV 225 (495)
Q Consensus 148 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~ 225 (495)
+|++++..+..+..+++|++|+|++|.+++..|..+. .+++|++|+|++|.+++..... .++ |+.|++++|.+++..
T Consensus 129 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~l~~L~~L~Ls~N~l~~l~ 207 (317)
T 3o53_A 129 NNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQV-VFAKLKTLDLSSNKLAFMG 207 (317)
T ss_dssp SSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCC-CCTTCCEEECCSSCCCEEC
T ss_pred CCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccccc-ccccCCEEECCCCcCCcch
Confidence 9999988888888899999999999999987777764 7889999999999988764333 344 899999999998654
Q ss_pred chhhhhcc-----cCCCCcCC
Q 040888 226 PEELKDIA-----KTGGNSWS 241 (495)
Q Consensus 226 p~~l~~l~-----~~~~n~~~ 241 (495)
| .+..++ .+.+|.+.
T Consensus 208 ~-~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 208 P-EFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp G-GGGGGTTCSEEECTTSCCC
T ss_pred h-hhcccCcccEEECcCCccc
Confidence 4 466554 34455544
No 80
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.73 E-value=5.8e-18 Score=159.29 Aligned_cols=162 Identities=21% Similarity=0.247 Sum_probs=137.1
Q ss_pred CCEeEEEcCCCC-CccccccccCCCCCCcEEECcC-CCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCc--
Q 040888 69 SSVTEIKLSGLG-LNGQLGYQLTNLKSVSYLDVSN-NNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELK-- 142 (495)
Q Consensus 69 ~~v~~l~L~~n~-l~g~~~~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~-- 142 (495)
.+++.|+|++|. +++..+..|.++++|++|+|++ |.+++..+..+. ++|++|+|++|.+++ +|. +..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 689999999997 8877777899999999999999 999865555543 899999999999997 776 88999998
Q ss_pred -EEEcccC-cCCCccchhhhCCCCCc-EEEccCCcCCCcCcccccCCCCCCEEeccCCc-ccccc-cccCCc-c-CcEEE
Q 040888 143 -YLNLGSN-QLNGQLSDMFQKNEKLE-TLDLSKNQLTGELPRSFASLSSLKKLYLQNNQ-FTGSI-NVLGKL-P-LDELN 215 (495)
Q Consensus 143 -~L~L~~N-~l~g~~p~~~~~l~~L~-~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g~~-~~~~~~-~-L~~l~ 215 (495)
+|++++| ++++..+..|..+++|+ .|++++|+++ .+|......++|+.|+|++|+ +++.. ..+..+ + |+.|+
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~ 211 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLD 211 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEE
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEE
Confidence 9999999 99988888899999999 9999999999 666554444899999999995 98766 567777 5 99999
Q ss_pred eecCCCcccCchhhhhcc
Q 040888 216 VENNKFSGWVPEELKDIA 233 (495)
Q Consensus 216 l~~N~l~g~~p~~l~~l~ 233 (495)
+++|.+++..+..+.++.
T Consensus 212 l~~N~l~~l~~~~~~~L~ 229 (239)
T 2xwt_C 212 VSQTSVTALPSKGLEHLK 229 (239)
T ss_dssp CTTCCCCCCCCTTCTTCS
T ss_pred CCCCccccCChhHhccCc
Confidence 999999965555455444
No 81
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.72 E-value=6.7e-18 Score=165.38 Aligned_cols=173 Identities=20% Similarity=0.252 Sum_probs=135.4
Q ss_pred CCCEeEEEcCCCCCccccc----cccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCC--cc--hhccC
Q 040888 68 GSSVTEIKLSGLGLNGQLG----YQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGT--VP--YSISQ 137 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~--~p--~~~~~ 137 (495)
..+++.|+|++|.+++..+ ..+..+++|++|+|++|.+.+..|..+. ++|++|||++|++.+. ++ ..+..
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 4679999999999998655 4566899999999999999887777665 8999999999998763 32 23478
Q ss_pred CCCCcEEEcccCcCCCc--cch-hhhCCCCCcEEEccCCcCCCcCcccccCC---CCCCEEeccCCcccccccccCCccC
Q 040888 138 MSELKYLNLGSNQLNGQ--LSD-MFQKNEKLETLDLSKNQLTGELPRSFASL---SSLKKLYLQNNQFTGSINVLGKLPL 211 (495)
Q Consensus 138 l~~L~~L~L~~N~l~g~--~p~-~~~~l~~L~~L~ls~N~l~g~~p~~~~~l---~~L~~L~l~~N~l~g~~~~~~~~~L 211 (495)
+++|++|+|++|+++.. .+. .+..+++|++|+|++|++++.+|..+..+ ++|++|+|++|+|+..+..+. ..|
T Consensus 196 l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~-~~L 274 (310)
T 4glp_A 196 FPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP-AKL 274 (310)
T ss_dssp SCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC-SCC
T ss_pred CCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhc-CCC
Confidence 99999999999999732 222 35788999999999999998888888877 699999999999995544443 349
Q ss_pred cEEEeecCCCcc-cCchhhhhcc--cCCCCcCC
Q 040888 212 DELNVENNKFSG-WVPEELKDIA--KTGGNSWS 241 (495)
Q Consensus 212 ~~l~l~~N~l~g-~~p~~l~~l~--~~~~n~~~ 241 (495)
+.|++++|++++ .++..+.++. .+.+|.+.
T Consensus 275 ~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 275 RVLDLSSNRLNRAPQPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp SCEECCSCCCCSCCCTTSCCCCSCEECSSTTTS
T ss_pred CEEECCCCcCCCCchhhhCCCccEEECcCCCCC
Confidence 999999999998 4554444444 44555543
No 82
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.72 E-value=4.6e-17 Score=148.01 Aligned_cols=124 Identities=31% Similarity=0.446 Sum_probs=68.2
Q ss_pred EECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCC
Q 040888 98 LDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTG 177 (495)
Q Consensus 98 L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 177 (495)
+++++|.++ .+|..++++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++
T Consensus 15 l~~~~~~l~-~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~ 92 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRC 92 (193)
T ss_dssp EECTTSCCS-SCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB
T ss_pred EEcCCCCCC-cCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCE
Confidence 333444433 344444455555555555555 455555555666666666666655555555555666666666666655
Q ss_pred cCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcc
Q 040888 178 ELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 178 ~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g 223 (495)
..|..|..+++|+.|+|++|+|++.. ..+..++ |+.|++++|++.+
T Consensus 93 i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 93 IPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred eCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 55555555666666666666655544 2344444 5666666665553
No 83
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.72 E-value=6.6e-18 Score=175.85 Aligned_cols=166 Identities=19% Similarity=0.186 Sum_probs=141.0
Q ss_pred CCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcc
Q 040888 68 GSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
..+++.|+|++|.+++..+ .++|+.|+|++|.+++..+.. .++|+.|+|++|.+++..|..++.+++|++|+|+
T Consensus 79 l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 152 (487)
T 3oja_A 79 LSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCSR-GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLK 152 (487)
T ss_dssp CTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCCCEEECC-CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECT
T ss_pred CCCCCEEEecCCcCCCCCC-----CCCcCEEECcCCcCCCCCccc-cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECC
Confidence 3689999999999987553 389999999999999766654 4789999999999999999999999999999999
Q ss_pred cCcCCCccchhhh-CCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccC
Q 040888 148 SNQLNGQLSDMFQ-KNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWV 225 (495)
Q Consensus 148 ~N~l~g~~p~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~ 225 (495)
+|.|++.+|..+. .+++|+.|+|++|.|++. |. +..+++|+.|+|++|.+++.++.+..++ |+.|++++|.|++ +
T Consensus 153 ~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-l 229 (487)
T 3oja_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-I 229 (487)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-E
T ss_pred CCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-c
Confidence 9999999888886 799999999999999976 32 4469999999999999999877677776 9999999999997 6
Q ss_pred chhhhhcc-----cCCCCcCCC
Q 040888 226 PEELKDIA-----KTGGNSWSS 242 (495)
Q Consensus 226 p~~l~~l~-----~~~~n~~~~ 242 (495)
|..+..++ .+.+|.+.|
T Consensus 230 p~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 230 EKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp CTTCCCCTTCCEEECTTCCBCH
T ss_pred chhhccCCCCCEEEcCCCCCcC
Confidence 76665544 455666654
No 84
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.72 E-value=6.2e-17 Score=158.39 Aligned_cols=148 Identities=26% Similarity=0.358 Sum_probs=85.7
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+.+.-...-.++|++|+|++|++++. |. +..+++|++|+|++
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~ 138 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLYLDL 138 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEECCS
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCchhhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEECCC
Confidence 456666666666665443 666666666666666665431111115666666666666643 22 66666666666666
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccC
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWV 225 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~ 225 (495)
|++++..+ +..+++|+.|+|++|.+++..+ +..+++|+.|+|++|++++..+ +..++ |+.|++++|.+++..
T Consensus 139 n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 139 NQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCG
T ss_pred CccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCccc
Confidence 66665433 5566666666666666664322 5666666666666666665433 33333 666666666666543
No 85
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.72 E-value=1.3e-17 Score=176.98 Aligned_cols=155 Identities=23% Similarity=0.332 Sum_probs=85.6
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCC--CCCCCCC--CCCcEEECcCCcCCCCcch-hccCCCCCcE
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKD--SIPYQLP--PNLKHLDLSENQFSGTVPY-SISQMSELKY 143 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~--~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~ 143 (495)
.+++.|+|++|.+++.+|..+.++++|++|+|++|++++ .+|..+. ++|++|+|++|++++.+|. .+..+++|++
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~ 432 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILV 432 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCE
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCE
Confidence 355566666666666555556666666666666666554 2222222 5566666666666553443 2555566666
Q ss_pred EEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccc-cCCcc-CcEEEeecCCC
Q 040888 144 LNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINV-LGKLP-LDELNVENNKF 221 (495)
Q Consensus 144 L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~-~~~~~-L~~l~l~~N~l 221 (495)
|+|++|++++.+|..+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++.+.. +..++ |+.|++++|++
T Consensus 433 L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~ 509 (562)
T 3a79_B 433 LNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPW 509 (562)
T ss_dssp EECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCB
T ss_pred EECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCc
Confidence 66666666555544332 45666666666665 4555555666666666666666543332 44444 56666666666
Q ss_pred cccCc
Q 040888 222 SGWVP 226 (495)
Q Consensus 222 ~g~~p 226 (495)
++..|
T Consensus 510 ~c~c~ 514 (562)
T 3a79_B 510 DCTCP 514 (562)
T ss_dssp CCCHH
T ss_pred CCCcc
Confidence 55444
No 86
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.72 E-value=1.9e-17 Score=174.50 Aligned_cols=147 Identities=29% Similarity=0.340 Sum_probs=114.0
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+++.|+|++|.|++ +|. +.+ +|+.|+|++|.|++ +|. ..++|+.|+|++|+|++ +|. .+++|++|+|++
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 169 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE-LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRN 169 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred CCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC-cCccccEEeCCCCccCc-CCC---cCCCcCEEECCC
Confidence 456667777777766 555 544 67777777777776 555 45778888888888875 555 567899999999
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCC-------CEEeccCCcccccccccCCcc-CcEEEeecCC
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSL-------KKLYLQNNQFTGSINVLGKLP-LDELNVENNK 220 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L-------~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~ 220 (495)
|+|++ +|. |. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+..+..+..++ |+.|+|++|+
T Consensus 170 N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~L~~N~ 241 (571)
T 3cvr_A 170 NQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITHIPENILSLDPTCTIILEDNP 241 (571)
T ss_dssp SCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCCCCGGGGGSCTTEEEECCSSS
T ss_pred CCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcceecCHHHhcCCCCCEEEeeCCc
Confidence 99987 666 55 89999999999999 7777 655 77 999999999997666566676 9999999999
Q ss_pred CcccCchhhhhcc
Q 040888 221 FSGWVPEELKDIA 233 (495)
Q Consensus 221 l~g~~p~~l~~l~ 233 (495)
|++.+|..+..+.
T Consensus 242 l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 242 LSSRIRESLSQQT 254 (571)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCCcCHHHHHHhh
Confidence 9999999998865
No 87
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.72 E-value=3.3e-17 Score=168.43 Aligned_cols=173 Identities=25% Similarity=0.365 Sum_probs=147.6
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcch-hccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPY-SISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~ 145 (495)
.+++.|+|++|.+++..+..|..+++|++|+|++|.+.+..+..+. ++|++|+|++|+..+.++. .|.++++|++|+
T Consensus 112 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~ 191 (440)
T 3zyj_A 112 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLN 191 (440)
T ss_dssp SSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEE
T ss_pred ccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeec
Confidence 5899999999999988888899999999999999999865554554 8999999999655545554 789999999999
Q ss_pred cccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcc
Q 040888 146 LGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 146 L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g 223 (495)
|++|+++ .+| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++.. ..+..++ |+.|+|++|++++
T Consensus 192 L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 192 LAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp CTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred CCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc
Confidence 9999998 455 3788999999999999999998999999999999999999999877 5677777 9999999999998
Q ss_pred cCchhhhhcc-----cCCCCcCCCC
Q 040888 224 WVPEELKDIA-----KTGGNSWSSS 243 (495)
Q Consensus 224 ~~p~~l~~l~-----~~~~n~~~~~ 243 (495)
..+..+..+. .+.+|+|.|.
T Consensus 270 ~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 270 LPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp CCTTTTSSCTTCCEEECCSSCEECS
T ss_pred cChhHhccccCCCEEEcCCCCccCC
Confidence 7777666554 5677877653
No 88
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.72 E-value=6.2e-17 Score=144.94 Aligned_cols=131 Identities=24% Similarity=0.391 Sum_probs=118.7
Q ss_pred CcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCc
Q 040888 95 VSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQ 174 (495)
Q Consensus 95 L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 174 (495)
.+.+++++|.++ .+|..++++|+.|+|++|++++..+..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCEEEecCCCCc-cCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 578999999998 6788888999999999999998777788999999999999999998888888999999999999999
Q ss_pred CCCcCcccccCCCCCCEEeccCCccccccc-ccCCcc-CcEEEeecCCCcccCc
Q 040888 175 LTGELPRSFASLSSLKKLYLQNNQFTGSIN-VLGKLP-LDELNVENNKFSGWVP 226 (495)
Q Consensus 175 l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~-~~~~~~-L~~l~l~~N~l~g~~p 226 (495)
+++..+..+..+++|+.|+|++|++++.+. .+..++ |+.|++++|++++..|
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 998877788999999999999999998774 456666 9999999999998776
No 89
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.72 E-value=4.1e-17 Score=172.37 Aligned_cols=164 Identities=23% Similarity=0.285 Sum_probs=143.4
Q ss_pred EecCCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCc
Q 040888 65 TCSGSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELK 142 (495)
Q Consensus 65 ~c~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 142 (495)
.|....+ .++++++++ .+|..+. ++|++|||++|++++..|..+. ++|++|+|++|++++..|..|.++++|+
T Consensus 3 ~C~~~~~--c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 77 (549)
T 2z81_A 3 SCDASGV--CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLE 77 (549)
T ss_dssp EECTTSE--EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred cCCCCce--EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCC
Confidence 5765454 788999998 4666554 7899999999999988787776 8999999999999998889999999999
Q ss_pred EEEcccCcCCCccchhhhCCCCCcEEEccCCcCCC-cCcccccCCCCCCEEeccCCcccccc--cccCCcc-CcEEEeec
Q 040888 143 YLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTG-ELPRSFASLSSLKKLYLQNNQFTGSI--NVLGKLP-LDELNVEN 218 (495)
Q Consensus 143 ~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~--~~~~~~~-L~~l~l~~ 218 (495)
+|+|++|++++..|..|+++++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+ ..+..++ |+.|++++
T Consensus 78 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~ 157 (549)
T 2z81_A 78 HLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKA 157 (549)
T ss_dssp EEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEE
T ss_pred EEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccC
Confidence 99999999999988889999999999999999997 46788999999999999999965555 4677777 99999999
Q ss_pred CCCcccCchhhhhcc
Q 040888 219 NKFSGWVPEELKDIA 233 (495)
Q Consensus 219 N~l~g~~p~~l~~l~ 233 (495)
|.+++.+|..+..+.
T Consensus 158 n~l~~~~~~~l~~l~ 172 (549)
T 2z81_A 158 LSLRNYQSQSLKSIR 172 (549)
T ss_dssp TTCCEECTTTTTTCS
T ss_pred CcccccChhhhhccc
Confidence 999999998876543
No 90
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.71 E-value=8e-17 Score=156.24 Aligned_cols=146 Identities=30% Similarity=0.446 Sum_probs=74.8
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+++.|+|++|.+++..+ +.++++|++|+|++|.+++.-+..-.++|++|+|++|++++. +.+..+++|+.|+|++
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~ 143 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGN 143 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGGGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCS
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCChhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccC
Confidence 445555555555554433 555555555555555555421111115555555555555542 2355555555555555
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcc
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g 223 (495)
|++++. +.+..+++|+.|+|++|++++..| +..+++|+.|+|++|.+++.. .+..++ |+.|++++|+++.
T Consensus 144 n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 144 NKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp SCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCCh-hhccCCCCCEEECcCCcccC
Confidence 555543 345555555555555555554333 555555555555555555432 233443 5555555555543
No 91
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.71 E-value=2.5e-17 Score=143.12 Aligned_cols=126 Identities=29% Similarity=0.356 Sum_probs=104.5
Q ss_pred CCEeEEEcCCCCCc-cccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLN-GQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~-g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
.+++.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+. ++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46889999999998 78888888999999999999998876 3333 7889999999999887888888888999999
Q ss_pred cccCcCCCc-cchhhhCCCCCcEEEccCCcCCCcCc---ccccCCCCCCEEeccC
Q 040888 146 LGSNQLNGQ-LSDMFQKNEKLETLDLSKNQLTGELP---RSFASLSSLKKLYLQN 196 (495)
Q Consensus 146 L~~N~l~g~-~p~~~~~l~~L~~L~ls~N~l~g~~p---~~~~~l~~L~~L~l~~ 196 (495)
|++|++++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999998874 45778888889999999998887655 4688888888888763
No 92
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=3.5e-17 Score=145.22 Aligned_cols=131 Identities=27% Similarity=0.342 Sum_probs=83.6
Q ss_pred CCEeEEEcCCCCCc-cccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLN-GQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~-g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
.+++.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+. ++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 35677777777776 66666667777777777777776654 2222 5666666666666666666666666666666
Q ss_pred cccCcCCCcc-chhhhCCCCCcEEEccCCcCCCcCc---ccccCCCCCCEEeccCCcccc
Q 040888 146 LGSNQLNGQL-SDMFQKNEKLETLDLSKNQLTGELP---RSFASLSSLKKLYLQNNQFTG 201 (495)
Q Consensus 146 L~~N~l~g~~-p~~~~~l~~L~~L~ls~N~l~g~~p---~~~~~l~~L~~L~l~~N~l~g 201 (495)
|++|+|++.. +..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 6666666532 2556666666666666666664433 356666666666666666543
No 93
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.70 E-value=1.5e-16 Score=155.73 Aligned_cols=147 Identities=28% Similarity=0.426 Sum_probs=128.0
Q ss_pred CCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcc
Q 040888 68 GSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
..+++.|+|++|.+++. +.+..+++|++|+|++|.+++..+..-.++|++|+|++|.+++..+ +..+++|+.|+|+
T Consensus 84 l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~ 159 (308)
T 1h6u_A 84 LTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIG 159 (308)
T ss_dssp CCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECC
T ss_pred CCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCCchhhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEcc
Confidence 36899999999999875 3699999999999999999975443333899999999999997654 8999999999999
Q ss_pred cCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcc
Q 040888 148 SNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 148 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g 223 (495)
+|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..+ +..++ |+.|++++|++++
T Consensus 160 ~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 160 NAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEEC
T ss_pred CCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeeec
Confidence 999997544 8999999999999999996544 8899999999999999998764 66666 9999999999986
No 94
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.70 E-value=2.9e-17 Score=161.39 Aligned_cols=156 Identities=19% Similarity=0.171 Sum_probs=102.1
Q ss_pred CCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcc
Q 040888 68 GSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
..+++.|+|++|.+++..+ +++|++|+|++|.+++..+.. .++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 79 l~~L~~L~Ls~n~l~~l~~-----~~~L~~L~l~~n~l~~~~~~~-~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 152 (317)
T 3o53_A 79 LSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCSR-GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLK 152 (317)
T ss_dssp CTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCSEEEECC-CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECT
T ss_pred cCCCCEEECcCCccccccC-----CCCcCEEECCCCccCCcCccc-cCCCCEEECCCCCCCCccchhhhccCCCCEEECC
Confidence 3577888888888775432 367777777777776544333 3567777777777776666667777777777777
Q ss_pred cCcCCCccchhh-hCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccC
Q 040888 148 SNQLNGQLSDMF-QKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWV 225 (495)
Q Consensus 148 ~N~l~g~~p~~~-~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~ 225 (495)
+|.+++..+..+ ..+++|++|+|++|.+++. |. ...+++|+.|+|++|++++.++.+..++ |+.|++++|.+++ +
T Consensus 153 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~-l 229 (317)
T 3o53_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-I 229 (317)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-E
T ss_pred CCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccc-h
Confidence 777776666555 3567777777777777644 32 2346677777777777776554455555 7777777777763 4
Q ss_pred chhhhhc
Q 040888 226 PEELKDI 232 (495)
Q Consensus 226 p~~l~~l 232 (495)
|..+..+
T Consensus 230 ~~~~~~l 236 (317)
T 3o53_A 230 EKALRFS 236 (317)
T ss_dssp CTTCCCC
T ss_pred hhHhhcC
Confidence 5544433
No 95
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=9.1e-17 Score=142.50 Aligned_cols=132 Identities=26% Similarity=0.261 Sum_probs=117.5
Q ss_pred CCCCCCcEEECcCCCCC-CCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCc
Q 040888 90 TNLKSVSYLDVSNNNLK-DSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLE 166 (495)
Q Consensus 90 ~~l~~L~~L~Ls~N~l~-g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~ 166 (495)
...++|+.|+|++|.++ +.+|..+. ++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34478999999999998 78887765 8999999999999976 7899999999999999999998999999999999
Q ss_pred EEEccCCcCCCcC-cccccCCCCCCEEeccCCccccccc----ccCCcc-CcEEEeecCCCcc
Q 040888 167 TLDLSKNQLTGEL-PRSFASLSSLKKLYLQNNQFTGSIN----VLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 167 ~L~ls~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~g~~~----~~~~~~-L~~l~l~~N~l~g 223 (495)
+|+|++|++++.. +..+..+++|+.|++++|.+++... .+..++ |+.|++++|.+..
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 9999999999642 3789999999999999999998775 677777 9999999998763
No 96
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=1e-16 Score=145.74 Aligned_cols=125 Identities=27% Similarity=0.333 Sum_probs=109.7
Q ss_pred EEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCc
Q 040888 73 EIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQ 150 (495)
Q Consensus 73 ~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~ 150 (495)
.+++++|+++ .+|..+. ++|++|+|++|.++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4555666666 4555443 58999999999998 6776665 899999999999999888899999999999999999
Q ss_pred CCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccc
Q 040888 151 LNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTG 201 (495)
Q Consensus 151 l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 201 (495)
|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999999999999999999999999997777789999999999999999975
No 97
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.69 E-value=1.7e-16 Score=168.85 Aligned_cols=148 Identities=31% Similarity=0.447 Sum_probs=129.0
Q ss_pred CCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 68 GSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
..+++.|+|++|.+++..+ +..+++|+.|+|++|.|.+. | .+. ++|+.|+|++|+|++. +.+..+++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL-S-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC-T-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC-h-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEE
Confidence 4689999999999998766 89999999999999999863 3 333 8999999999999963 4589999999999
Q ss_pred cccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCccc
Q 040888 146 LGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGW 224 (495)
Q Consensus 146 L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~ 224 (495)
|++|.|++. ..+..+++|+.|+|++|.|++..| +..+++|+.|+|++|+|++. +.+..++ |+.|+|++|.+++.
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECC
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCC
Confidence 999999976 678999999999999999998766 89999999999999999875 5566676 99999999999875
Q ss_pred Cc
Q 040888 225 VP 226 (495)
Q Consensus 225 ~p 226 (495)
..
T Consensus 213 p~ 214 (605)
T 1m9s_A 213 PI 214 (605)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 98
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.69 E-value=3.4e-16 Score=151.85 Aligned_cols=154 Identities=26% Similarity=0.353 Sum_probs=131.3
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+++.|++++|.+... +.+..+++|++|+|++|.+++..|..-.++|++|+|++|++++ +| .+..+++|++|+|++
T Consensus 46 ~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~ 121 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEH 121 (291)
T ss_dssp HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTT
T ss_pred CcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcccccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCC
Confidence 5799999999999865 3589999999999999999986663333899999999999986 44 499999999999999
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccCch
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWVPE 227 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~p~ 227 (495)
|++++. +.+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..+ +..++ |+.|++++|.+++. |.
T Consensus 122 n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~l-~~ 195 (291)
T 1h6t_A 122 NGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDL-RA 195 (291)
T ss_dssp SCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBC-GG
T ss_pred CcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCCCC-hh
Confidence 999974 4688999999999999999975 578999999999999999998766 66666 99999999999863 32
Q ss_pred hhhhcc
Q 040888 228 ELKDIA 233 (495)
Q Consensus 228 ~l~~l~ 233 (495)
+..++
T Consensus 196 -l~~l~ 200 (291)
T 1h6t_A 196 -LAGLK 200 (291)
T ss_dssp -GTTCT
T ss_pred -hccCC
Confidence 44443
No 99
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.68 E-value=3e-16 Score=162.52 Aligned_cols=146 Identities=29% Similarity=0.361 Sum_probs=79.9
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+++.|+|++|.+.+..| ++.+++|+.|+|++|.+.+.-...-.++|+.|+|++|.+++..| +..+++|+.|+|++
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~ 274 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 274 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCS
T ss_pred CCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccchhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCC
Confidence 456677777776666544 55566666666666666542111111556666666666655443 55556666666666
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcc
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g 223 (495)
|.+++..+ +..+++|+.|++++|++++..| +..+++|+.|+|++|++++..+ +..++ |+.|++++|.+++
T Consensus 275 n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 275 NQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp SCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCC
T ss_pred CccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCC
Confidence 66554433 5555556666666665554333 4555555555555555555443 22333 5555555555554
No 100
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.68 E-value=3.1e-17 Score=159.25 Aligned_cols=89 Identities=28% Similarity=0.572 Sum_probs=75.5
Q ss_pred cCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
++|...+.||+|+||+||+|++. +++.||||+++.... ...++|.+|+++|++++|||||+++|+|.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD--NARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCH--HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCCh--HHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 45667789999999999999863 477899999976432 3357899999999999999999999999999999
Q ss_pred EEEEEecCCCCHhhhhC
Q 040888 479 ILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L~ 495 (495)
++|||||++|+|.++|+
T Consensus 91 ~lV~Ey~~~G~L~~~l~ 107 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLR 107 (299)
T ss_dssp EEEEECCTTCBHHHHHH
T ss_pred EEEEEcCCCCcHHHHHH
Confidence 99999999999999873
No 101
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.68 E-value=4.1e-17 Score=160.60 Aligned_cols=89 Identities=26% Similarity=0.561 Sum_probs=77.2
Q ss_pred cCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
++|...+.||+|+||+||+|++. +++.||||+++.... ...++|.+|+++|++++|||||+++|+|.+.+..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE--SARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSH--HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCH--HHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 45666789999999999999864 478999999975432 3357899999999999999999999999999999
Q ss_pred EEEEEecCCCCHhhhhC
Q 040888 479 ILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L~ 495 (495)
++|||||++|+|.++|+
T Consensus 119 ~lV~Ey~~~G~L~~~l~ 135 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLR 135 (329)
T ss_dssp EEEEECCTTCBHHHHHH
T ss_pred EEEEEcCCCCcHHHHHH
Confidence 99999999999999863
No 102
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=8.6e-17 Score=139.65 Aligned_cols=124 Identities=24% Similarity=0.282 Sum_probs=106.3
Q ss_pred CCCCcEEECcCCCCC-CCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEE
Q 040888 92 LKSVSYLDVSNNNLK-DSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETL 168 (495)
Q Consensus 92 l~~L~~L~Ls~N~l~-g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 168 (495)
.++|+.|+|++|.++ +.+|..+. ++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467999999999998 78887665 8999999999999976 778999999999999999998889888889999999
Q ss_pred EccCCcCCCc-CcccccCCCCCCEEeccCCccccccc----ccCCcc-CcEEEee
Q 040888 169 DLSKNQLTGE-LPRSFASLSSLKKLYLQNNQFTGSIN----VLGKLP-LDELNVE 217 (495)
Q Consensus 169 ~ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~~~----~~~~~~-L~~l~l~ 217 (495)
++++|.+++. .|..+..+++|++|++++|.+++... .+..++ |+.||++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 9999999874 45789999999999999999987664 455555 7887765
No 103
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.67 E-value=4.4e-17 Score=158.83 Aligned_cols=87 Identities=26% Similarity=0.453 Sum_probs=74.5
Q ss_pred CcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
+...+.||+|+||+||+|++. +++.||||+++.... ....++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~-~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE-GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC-C-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC-hHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 445678999999999999873 467899999975432 2346789999999999999999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
|||||++|+|.++|
T Consensus 107 V~Ey~~~G~L~~~L 120 (308)
T 4gt4_A 107 IFSYCSHGDLHEFL 120 (308)
T ss_dssp EEECCSSCBHHHHH
T ss_pred EEEcCCCCcHHHHH
Confidence 99999999999987
No 104
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.67 E-value=4.2e-16 Score=148.88 Aligned_cols=147 Identities=21% Similarity=0.277 Sum_probs=125.0
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+++.|+|++|+++. ++ .+..+++|+.|+|++|.+++..|..-.++|++|+|++|++++ +|.. .. ++|+.|+|++
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~ 115 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDN 115 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCS
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChhhccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccC
Confidence 689999999999985 44 789999999999999999976652223899999999999996 4433 33 9999999999
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccC
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWV 225 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~ 225 (495)
|++++. + .+..+++|+.|+|++|++++. | .+..+++|+.|+|++|++++. ..+..++ |+.|++++|.+++..
T Consensus 116 N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 116 NELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp SCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECCC
T ss_pred CccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCCc
Confidence 999974 3 588999999999999999965 4 689999999999999999987 6666666 999999999998763
No 105
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.67 E-value=3.4e-16 Score=162.12 Aligned_cols=163 Identities=26% Similarity=0.450 Sum_probs=137.3
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+++.|+|++|.+++. +.+..+++|+.|+|++|.+.+..|..-.++|+.|+|++|.+++..| +..+++|+.|+|++
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~ 296 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNE 296 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCS
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchhhhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCC
Confidence 6799999999999874 4688999999999999999987764444899999999999997655 88999999999999
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccCch
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWVPE 227 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~p~ 227 (495)
|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|++++|++++. +.+..++ |+.|++++|.+++..|
T Consensus 297 n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~- 370 (466)
T 1o6v_A 297 NQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISDLTP- 370 (466)
T ss_dssp SCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCBCGG-
T ss_pred CcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCccCccch-
Confidence 99998655 7889999999999999998766 78999999999999999886 4566666 9999999999999887
Q ss_pred hhhhcc-----cCCCCcCCC
Q 040888 228 ELKDIA-----KTGGNSWSS 242 (495)
Q Consensus 228 ~l~~l~-----~~~~n~~~~ 242 (495)
+..++ .+.+|.+..
T Consensus 371 -~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 371 -LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp -GTTCTTCCEEECCCEEEEC
T ss_pred -hhcCCCCCEEeccCCcccC
Confidence 55554 344555543
No 106
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.66 E-value=4.8e-16 Score=165.40 Aligned_cols=154 Identities=26% Similarity=0.357 Sum_probs=132.9
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+|+.|+|++|.+... + .+..|++|+.|+|++|.|.+..|..-.++|+.|+|++|+|++ +| .+..+++|+.|+|++
T Consensus 43 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~ 118 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEH 118 (605)
T ss_dssp TTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTT
T ss_pred CCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChhhccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecC
Confidence 5789999999999864 3 589999999999999999987663334899999999999996 34 799999999999999
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccCch
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWVPE 227 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~p~ 227 (495)
|.|++. +.+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|.|++.++ +..++ |+.|+|++|.|++. |
T Consensus 119 N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~l-~- 191 (605)
T 1m9s_A 119 NGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDL-R- 191 (605)
T ss_dssp SCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBC-G-
T ss_pred CCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCCC-h-
Confidence 999974 4588999999999999999975 679999999999999999998777 66666 99999999999974 3
Q ss_pred hhhhcc
Q 040888 228 ELKDIA 233 (495)
Q Consensus 228 ~l~~l~ 233 (495)
.+..++
T Consensus 192 ~l~~l~ 197 (605)
T 1m9s_A 192 ALAGLK 197 (605)
T ss_dssp GGTTCT
T ss_pred HHccCC
Confidence 455544
No 107
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.66 E-value=9.7e-16 Score=152.17 Aligned_cols=156 Identities=21% Similarity=0.341 Sum_probs=116.0
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+++.|++++|.+.+..+ +..+++|+.|+|++|.+.+..+..-.++|+.|++++|.+++..+ +..+++|+.|+|++
T Consensus 155 ~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~ 230 (347)
T 4fmz_A 155 TGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGN 230 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCS
T ss_pred CCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccccccccCCCccceeecccCCCCCCch--hhcCCcCCEEEccC
Confidence 578888888888876654 77888888888888888765443333788888888888876544 77788888888888
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccCch
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWVPE 227 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~p~ 227 (495)
|++++..+ +..+++|+.|++++|.+++. +.+..+++|+.|++++|++++. +.+..++ |+.|++++|.+++..|.
T Consensus 231 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~ 305 (347)
T 4fmz_A 231 NKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDME 305 (347)
T ss_dssp SCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHH
T ss_pred CccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChh
Confidence 88876544 77778888888888888753 3577788888888888887764 3444454 78888888888877777
Q ss_pred hhhhcc
Q 040888 228 ELKDIA 233 (495)
Q Consensus 228 ~l~~l~ 233 (495)
.+..++
T Consensus 306 ~l~~l~ 311 (347)
T 4fmz_A 306 VIGGLT 311 (347)
T ss_dssp HHHTCT
T ss_pred Hhhccc
Confidence 776655
No 108
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.65 E-value=1.4e-15 Score=156.89 Aligned_cols=158 Identities=28% Similarity=0.431 Sum_probs=114.7
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+++.|+|++|.+++ +| .++++++|++|+|++|++++ +|.. .++|++|+|++|++++ +| .++++++|++|++++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~-~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~ 204 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL-PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADN 204 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC-CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC-cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCC
Confidence 467788888888876 66 58888888888888888885 5543 3588888888888886 56 588888888888888
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCccCcEEEeecCCCcccCchh
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLPLDELNVENNKFSGWVPEE 228 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~L~~l~l~~N~l~g~~p~~ 228 (495)
|++++ +|... .+|+.|++++|.++ .+|. +..+++|+.|++++|++++..... ..|+.|++++|.+++ +|..
T Consensus 205 N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~l~~~~--~~L~~L~l~~N~l~~-l~~~ 275 (454)
T 1jl5_A 205 NSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKTLPDLP--PSLEALNVRDNYLTD-LPEL 275 (454)
T ss_dssp SCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSSCCSCC--TTCCEEECCSSCCSC-CCCC
T ss_pred CcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCcccccc--cccCEEECCCCcccc-cCcc
Confidence 88886 44332 47888888888888 6674 788888888888888888644321 237888888888876 5554
Q ss_pred hhhcc--cCCCCcCC
Q 040888 229 LKDIA--KTGGNSWS 241 (495)
Q Consensus 229 l~~l~--~~~~n~~~ 241 (495)
+.++. .+.+|.+.
T Consensus 276 ~~~L~~L~ls~N~l~ 290 (454)
T 1jl5_A 276 PQSLTFLDVSENIFS 290 (454)
T ss_dssp CTTCCEEECCSSCCS
T ss_pred cCcCCEEECcCCccC
Confidence 44443 34445443
No 109
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.65 E-value=1.9e-16 Score=156.25 Aligned_cols=90 Identities=23% Similarity=0.428 Sum_probs=75.1
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||+||+|+. .+|+.||||++..........+.|.+|+++|++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5788899999999999999997 469999999997665443445789999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
||++|+|.++|
T Consensus 104 y~~gg~L~~~i 114 (350)
T 4b9d_A 104 YCEGGDLFKRI 114 (350)
T ss_dssp CCTTCBHHHHH
T ss_pred CCCCCcHHHHH
Confidence 99999999987
No 110
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.65 E-value=6.9e-16 Score=153.23 Aligned_cols=156 Identities=25% Similarity=0.425 Sum_probs=133.5
Q ss_pred CCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcc
Q 040888 68 GSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
..+++.|+|++|.+.+..+ +..+++|+.|++++|.+.+..+..-.++|++|+|++|.+++..+ +..+++|++|+|+
T Consensus 176 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~ 251 (347)
T 4fmz_A 176 LTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIG 251 (347)
T ss_dssp CTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred CCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECC
Confidence 3689999999999987654 88999999999999999976664344899999999999996554 8999999999999
Q ss_pred cCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecCCCcccC
Q 040888 148 SNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGWV 225 (495)
Q Consensus 148 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~~ 225 (495)
+|.+++. +.+..+++|+.|++++|++++. +.+..+++|+.|++++|++++.. ..+..++ |+.|++++|.+++..
T Consensus 252 ~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 327 (347)
T 4fmz_A 252 TNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIR 327 (347)
T ss_dssp SSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCG
T ss_pred CCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccccc
Confidence 9999874 4688999999999999999864 45889999999999999999877 5566776 999999999999877
Q ss_pred chhhhhcc
Q 040888 226 PEELKDIA 233 (495)
Q Consensus 226 p~~l~~l~ 233 (495)
| +..++
T Consensus 328 ~--~~~l~ 333 (347)
T 4fmz_A 328 P--LASLS 333 (347)
T ss_dssp G--GGGCT
T ss_pred C--hhhhh
Confidence 7 44444
No 111
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.64 E-value=2.8e-15 Score=154.73 Aligned_cols=141 Identities=22% Similarity=0.290 Sum_probs=66.2
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccC
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSN 149 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 149 (495)
+++.|+|++|.+++. | ++.+++|++|+|++|.+++. |..-.++|++|+|++|++++ +| ++.+++|++|+|++|
T Consensus 65 ~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N 137 (457)
T 3bz5_A 65 GLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-DVTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARN 137 (457)
T ss_dssp TCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-CCTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTS
T ss_pred CCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-ecCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCC
Confidence 444444444444442 1 44444444444444444432 21112445555555555443 22 444455555555555
Q ss_pred cCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCccc
Q 040888 150 QLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGW 224 (495)
Q Consensus 150 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~ 224 (495)
+|++. + ++.+++|++|++++|+..+.+ .+..+++|+.|++++|++++.. +..++ |+.|++++|.+++.
T Consensus 138 ~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~--l~~l~~L~~L~l~~N~l~~~ 206 (457)
T 3bz5_A 138 TLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD--VSQNKLLNRLNCDTNNITKL 206 (457)
T ss_dssp CCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC--CTTCTTCCEEECCSSCCSCC
T ss_pred cccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceec--cccCCCCCEEECcCCcCCee
Confidence 55442 2 444445555555555433333 2445555555555555555532 33333 55666666665553
No 112
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.64 E-value=1.2e-15 Score=135.71 Aligned_cols=107 Identities=30% Similarity=0.440 Sum_probs=92.3
Q ss_pred cEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcC
Q 040888 96 SYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQL 175 (495)
Q Consensus 96 ~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l 175 (495)
+.|++++|.++ .+|..++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CEEEeCCCCcC-ccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 45666677766 47777778899999999999988888999999999999999999988888889999999999999999
Q ss_pred CCcCcccccCCCCCCEEeccCCcccccc
Q 040888 176 TGELPRSFASLSSLKKLYLQNNQFTGSI 203 (495)
Q Consensus 176 ~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 203 (495)
++..+..|..+++|+.|+|++|.++...
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 9877777999999999999999887653
No 113
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.64 E-value=3.1e-15 Score=154.32 Aligned_cols=142 Identities=24% Similarity=0.296 Sum_probs=103.9
Q ss_pred CCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcc
Q 040888 68 GSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
..+++.|+|++|.+++. + ++++++|++|+|++|++++ +|..-.++|++|+|++|++++. + ++.+++|++|+++
T Consensus 84 l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~ 156 (457)
T 3bz5_A 84 NTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LDVSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCH 156 (457)
T ss_dssp CTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CCCTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECT
T ss_pred CCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ecCCCCCcCCEEECCCCcccee-c--cccCCcCCEEECC
Confidence 35789999999999885 3 8899999999999999987 4533348899999999998873 3 6777778888888
Q ss_pred cCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcc
Q 040888 148 SNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSG 223 (495)
Q Consensus 148 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g 223 (495)
+|+..+.++ +..+++|+.|++++|++++ +| +..+++|+.|++++|++++. .+..++ |+.|++++|++++
T Consensus 157 ~n~~~~~~~--~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 157 LNKKITKLD--VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp TCSCCCCCC--CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC
T ss_pred CCCcccccc--cccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc
Confidence 776655553 5667777777777777775 34 66667777777777776664 244444 6666777666666
No 114
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.63 E-value=6.9e-16 Score=153.70 Aligned_cols=177 Identities=18% Similarity=0.207 Sum_probs=130.3
Q ss_pred CCCCcccEEecC-----------CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC---CCCc-EEE
Q 040888 57 CGEHWKGITCSG-----------SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP---PNLK-HLD 121 (495)
Q Consensus 57 C~~~w~gv~c~~-----------~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~---~~L~-~L~ 121 (495)
|.|.|..|.|+. .+++.|+|++|+|+...+..|.++++|++|||++|++.+.+|.... ++|+ .++
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 777899999974 2589999999999976667899999999999999999888886543 4544 577
Q ss_pred CcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccC-CcCCCcCcccccCCC-CCCEEeccCCcc
Q 040888 122 LSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSK-NQLTGELPRSFASLS-SLKKLYLQNNQF 199 (495)
Q Consensus 122 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~-~L~~L~l~~N~l 199 (495)
++.|+++...|..|..+++|++|++++|+|++..+..+....++..|++++ |+++...+..|..+. .++.|+|++|+|
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i 166 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI 166 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCC
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccc
Confidence 888999988888999999999999999999877776666666777777765 456544444555554 467777888777
Q ss_pred ccccc-ccCCccCcEEEeecCCCcccCch-hhhhcc
Q 040888 200 TGSIN-VLGKLPLDELNVENNKFSGWVPE-ELKDIA 233 (495)
Q Consensus 200 ~g~~~-~~~~~~L~~l~l~~N~l~g~~p~-~l~~l~ 233 (495)
+.... .+....++.+++++|+..+.+|. .|..++
T Consensus 167 ~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~ 202 (350)
T 4ay9_X 167 QEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGAS 202 (350)
T ss_dssp CEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEE
T ss_pred cCCChhhccccchhHHhhccCCcccCCCHHHhccCc
Confidence 75543 33333477777765443344443 344444
No 115
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.62 E-value=3.3e-17 Score=165.50 Aligned_cols=161 Identities=19% Similarity=0.264 Sum_probs=106.8
Q ss_pred CCEeEEEcCCCCCcc----ccccccCCCCCCcEEECcCCCCCCCCCCCCC---------------CCCcEEECcCCcCC-
Q 040888 69 SSVTEIKLSGLGLNG----QLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP---------------PNLKHLDLSENQFS- 128 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g----~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~---------------~~L~~L~Ls~N~l~- 128 (495)
.+++.|+|++|.+++ .+|..+.++++|++|+|++|.+++..+..+. ++|++|+|++|+++
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~ 173 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 173 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc
Confidence 567777777777776 4666677777777777777776533222221 47777777777776
Q ss_pred CCcc---hhccCCCCCcEEEcccCcCC--C---ccchhhhCCCCCcEEEccCCcCC----CcCcccccCCCCCCEEeccC
Q 040888 129 GTVP---YSISQMSELKYLNLGSNQLN--G---QLSDMFQKNEKLETLDLSKNQLT----GELPRSFASLSSLKKLYLQN 196 (495)
Q Consensus 129 g~~p---~~~~~l~~L~~L~L~~N~l~--g---~~p~~~~~l~~L~~L~ls~N~l~----g~~p~~~~~l~~L~~L~l~~ 196 (495)
+.+| ..+..+++|+.|+|++|+++ | .+|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++
T Consensus 174 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~ 253 (386)
T 2ca6_A 174 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 253 (386)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCC
Confidence 4444 35666777777777777776 3 34446677777777777777775 55677777777777777777
Q ss_pred Cccccc----c-ccc--CCcc-CcEEEeecCCCcc----cCchhh
Q 040888 197 NQFTGS----I-NVL--GKLP-LDELNVENNKFSG----WVPEEL 229 (495)
Q Consensus 197 N~l~g~----~-~~~--~~~~-L~~l~l~~N~l~g----~~p~~l 229 (495)
|.+++. + ..+ +.++ |+.|+|++|.+++ .+|..+
T Consensus 254 n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l 298 (386)
T 2ca6_A 254 CLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVI 298 (386)
T ss_dssp CCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHH
T ss_pred CCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHH
Confidence 777654 2 222 2234 7777777777776 466655
No 116
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.62 E-value=1.3e-15 Score=138.91 Aligned_cols=128 Identities=13% Similarity=0.265 Sum_probs=110.9
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
.+++.|+|++|.++ .++.+..+++|++|+|++|.+++..|..+. ++|++|+|++|++++..|..+..+++|++|+|
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 68999999999665 345799999999999999999987777776 89999999999999989999999999999999
Q ss_pred ccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccc
Q 040888 147 GSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTG 201 (495)
Q Consensus 147 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 201 (495)
++|.+.+.+| .+..+++|+.|++++|.+++ ++ .+..+++|+.|++++|++.+
T Consensus 144 ~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 144 SYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred cCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 9999444566 68999999999999999996 44 78999999999999999864
No 117
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.62 E-value=4.3e-16 Score=151.40 Aligned_cols=89 Identities=22% Similarity=0.423 Sum_probs=75.2
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.+++...+.||+|+||+||+|++.+ .||||+++.........+.|.+|+++|++++|||||+++|+|.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4566778999999999999999854 58999997654433345789999999999999999999999865 55799999
Q ss_pred ecCCCCHhhhhC
Q 040888 484 YYRNGSLHEFLH 495 (495)
Q Consensus 484 y~~~GsL~~~L~ 495 (495)
||++|+|.++|+
T Consensus 112 y~~gGsL~~~l~ 123 (307)
T 3omv_A 112 WCEGSSLYKHLH 123 (307)
T ss_dssp CCSSCBHHHHHH
T ss_pred cCCCCCHHHHHh
Confidence 999999999873
No 118
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.62 E-value=3e-15 Score=133.59 Aligned_cols=107 Identities=29% Similarity=0.442 Sum_probs=91.3
Q ss_pred cEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcC
Q 040888 96 SYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQL 175 (495)
Q Consensus 96 ~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l 175 (495)
+.+++++|.+. .+|..++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l 93 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL 93 (174)
T ss_dssp SEEECCSSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred cEEEeCCCCCC-ccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCcc
Confidence 46677777774 67777778899999999999988888999999999999999999987777788999999999999999
Q ss_pred CCcCcccccCCCCCCEEeccCCcccccc
Q 040888 176 TGELPRSFASLSSLKKLYLQNNQFTGSI 203 (495)
Q Consensus 176 ~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 203 (495)
++..+..|..+++|+.|+|++|.|....
T Consensus 94 ~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 94 KSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ceeCHHHhccccCCCEEEeCCCCccccc
Confidence 9766666899999999999999887544
No 119
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.61 E-value=1.3e-16 Score=157.59 Aligned_cols=164 Identities=19% Similarity=0.262 Sum_probs=121.0
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCC-CCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDS-IPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
..++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+. ++|++|+|++|.+++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4677888888888777655 55788888888888887754 543333 7888888888888877888888888888888
Q ss_pred cccC-cCCCc-cchhhhCCCCCcEEEccCC-cCCCc-CcccccCCC-CCCEEeccCC--ccc-ccc-cccCCcc-CcEEE
Q 040888 146 LGSN-QLNGQ-LSDMFQKNEKLETLDLSKN-QLTGE-LPRSFASLS-SLKKLYLQNN--QFT-GSI-NVLGKLP-LDELN 215 (495)
Q Consensus 146 L~~N-~l~g~-~p~~~~~l~~L~~L~ls~N-~l~g~-~p~~~~~l~-~L~~L~l~~N--~l~-g~~-~~~~~~~-L~~l~ 215 (495)
|++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|++|+|++| .++ +.+ ..+..++ |+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 8888 67763 6777778888888888888 88764 567777888 8888888888 444 222 3444455 88888
Q ss_pred eecCC-CcccCchhhhhcc
Q 040888 216 VENNK-FSGWVPEELKDIA 233 (495)
Q Consensus 216 l~~N~-l~g~~p~~l~~l~ 233 (495)
+++|. +++..+..+..++
T Consensus 229 l~~~~~l~~~~~~~l~~l~ 247 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLN 247 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCT
T ss_pred CCCCCcCCHHHHHHHhCCC
Confidence 88888 6766676666554
No 120
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.61 E-value=9.1e-16 Score=137.21 Aligned_cols=131 Identities=25% Similarity=0.268 Sum_probs=83.4
Q ss_pred ccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCC
Q 040888 88 QLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKL 165 (495)
Q Consensus 88 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L 165 (495)
.+.++++|+.|+|++|.++. +|.... ++|++|+|++|.|++. ..+..+++|++|+|++|+|++..+..+..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 34556667777777776663 332111 3677777777777653 456677777777777777775555555677777
Q ss_pred cEEEccCCcCCCcCcc--cccCCCCCCEEeccCCcccccccc----cCCcc-CcEEEeecCCCc
Q 040888 166 ETLDLSKNQLTGELPR--SFASLSSLKKLYLQNNQFTGSINV----LGKLP-LDELNVENNKFS 222 (495)
Q Consensus 166 ~~L~ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~g~~~~----~~~~~-L~~l~l~~N~l~ 222 (495)
++|+|++|+++ .+|. .+..+++|+.|++++|.++..... +..++ |+.||+++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777774 4454 666777777777777777654432 44444 777777777654
No 121
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.59 E-value=1.6e-16 Score=157.03 Aligned_cols=152 Identities=22% Similarity=0.232 Sum_probs=129.1
Q ss_pred CCEeEEEcCCCCCccc-cccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCC-cCCCC-cchhccCCCCCcE
Q 040888 69 SSVTEIKLSGLGLNGQ-LGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSEN-QFSGT-VPYSISQMSELKY 143 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~-~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~ 143 (495)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++..|..+. ++|++|+|++| .+++. +|..+.++++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 6799999999999877 888899999999999999998876665544 89999999999 68763 7777889999999
Q ss_pred EEcccC-cCCCc-cchhhhCCC-CCcEEEccCC--cCC-CcCcccccCCCCCCEEeccCCc-ccccc-cccCCcc-CcEE
Q 040888 144 LNLGSN-QLNGQ-LSDMFQKNE-KLETLDLSKN--QLT-GELPRSFASLSSLKKLYLQNNQ-FTGSI-NVLGKLP-LDEL 214 (495)
Q Consensus 144 L~L~~N-~l~g~-~p~~~~~l~-~L~~L~ls~N--~l~-g~~p~~~~~l~~L~~L~l~~N~-l~g~~-~~~~~~~-L~~l 214 (495)
|+|++| .+++. ++..+..++ +|++|++++| .++ +.+|..+.++++|+.|++++|. +++.. ..+..++ |+.|
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L 252 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHL 252 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEe
Confidence 999999 99875 678888999 9999999999 566 5678888889999999999999 66544 5666666 9999
Q ss_pred EeecCC
Q 040888 215 NVENNK 220 (495)
Q Consensus 215 ~l~~N~ 220 (495)
++++|.
T Consensus 253 ~l~~~~ 258 (336)
T 2ast_B 253 SLSRCY 258 (336)
T ss_dssp ECTTCT
T ss_pred eCCCCC
Confidence 999996
No 122
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.59 E-value=1.3e-14 Score=149.65 Aligned_cols=147 Identities=31% Similarity=0.438 Sum_probs=112.3
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
.+++.|+|++|.+++ +|.. +++|++|+|++|.+++ +|. ++++|++|+|++|++++ +| .++++++|++|++++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~-~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~ 162 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSD-LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDN 162 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCS-CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccC-CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCC
Confidence 578888888888887 6643 3788899999998885 332 33789999999999986 77 589999999999999
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCccCcEEEeecCCCcccCchh
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLPLDELNVENNKFSGWVPEE 228 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~L~~l~l~~N~l~g~~p~~ 228 (495)
|++++ +|..+ .+|++|++++|++++ +| .++++++|+.|++++|++++..... ..|+.|++++|.++ .+|.
T Consensus 163 N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~~--~~L~~L~l~~n~l~-~lp~- 232 (454)
T 1jl5_A 163 NSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDLP--LSLESIVAGNNILE-ELPE- 232 (454)
T ss_dssp SCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCCC--TTCCEEECCSSCCS-SCCC-
T ss_pred CcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCCc--CcccEEECcCCcCC-cccc-
Confidence 99986 56543 588999999999986 56 5888999999999999888743221 13778888888777 5663
Q ss_pred hhhcc
Q 040888 229 LKDIA 233 (495)
Q Consensus 229 l~~l~ 233 (495)
+..++
T Consensus 233 ~~~l~ 237 (454)
T 1jl5_A 233 LQNLP 237 (454)
T ss_dssp CTTCT
T ss_pred cCCCC
Confidence 54443
No 123
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.59 E-value=1.6e-15 Score=146.26 Aligned_cols=86 Identities=16% Similarity=0.324 Sum_probs=73.4
Q ss_pred ccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe----CCEEEEEEE
Q 040888 409 TGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE----QGHNILIYD 483 (495)
Q Consensus 409 ~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~e 483 (495)
..+.||+|+||+||+|... ++..||||++..........+.|.+|+++|++++|||||+++++|.. ++..++|||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE 109 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence 3567999999999999974 58999999997654433445779999999999999999999999975 245789999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
||++|+|.++|
T Consensus 110 y~~gg~L~~~l 120 (290)
T 3fpq_A 110 LMTSGTLKTYL 120 (290)
T ss_dssp CCCSCBHHHHH
T ss_pred CCCCCCHHHHH
Confidence 99999999987
No 124
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.59 E-value=2.1e-16 Score=159.57 Aligned_cols=165 Identities=27% Similarity=0.356 Sum_probs=116.7
Q ss_pred CCEeEEEcCCCCCcccc----ccccCCCCCCcEEECcCC---CCCCCCCCCC---------CCCCcEEECcCCcCCC---
Q 040888 69 SSVTEIKLSGLGLNGQL----GYQLTNLKSVSYLDVSNN---NLKDSIPYQL---------PPNLKHLDLSENQFSG--- 129 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~----~~~~~~l~~L~~L~Ls~N---~l~g~~p~~~---------~~~L~~L~Ls~N~l~g--- 129 (495)
.+++.|+|++|.+++.. +..+..+++|++|+|++| ++++.+|..+ .++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 56888888888887763 345778888888888885 4445555433 2788888888888887
Q ss_pred -CcchhccCCCCCcEEEcccCcCCCccchh----hhCC---------CCCcEEEccCCcCC-CcCc---ccccCCCCCCE
Q 040888 130 -TVPYSISQMSELKYLNLGSNQLNGQLSDM----FQKN---------EKLETLDLSKNQLT-GELP---RSFASLSSLKK 191 (495)
Q Consensus 130 -~~p~~~~~l~~L~~L~L~~N~l~g~~p~~----~~~l---------~~L~~L~ls~N~l~-g~~p---~~~~~l~~L~~ 191 (495)
.+|..+..+++|++|+|++|.|++..+.. +..+ ++|++|+|++|+++ +.+| ..+..+++|+.
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 47777888888888888888886543333 3333 78888888888887 4455 45667788888
Q ss_pred EeccCCccc--c---ccc-ccCCcc-CcEEEeecCCCc----ccCchhhhhcc
Q 040888 192 LYLQNNQFT--G---SIN-VLGKLP-LDELNVENNKFS----GWVPEELKDIA 233 (495)
Q Consensus 192 L~l~~N~l~--g---~~~-~~~~~~-L~~l~l~~N~l~----g~~p~~l~~l~ 233 (495)
|+|++|+++ | .++ .+..++ |+.|+|++|.++ +.+|..+..++
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~ 244 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 244 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCC
Confidence 888888887 3 223 555555 888888888886 55666665544
No 125
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.59 E-value=1.4e-15 Score=149.79 Aligned_cols=88 Identities=23% Similarity=0.319 Sum_probs=78.1
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+.|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|+++|++++|||||++++++.+++..|+|||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 45888899999999999999984 699999999975433 224568899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
||++|+|.+++
T Consensus 152 y~~gg~L~~~l 162 (346)
T 4fih_A 152 FLEGGALTDIV 162 (346)
T ss_dssp CCTTEEHHHHH
T ss_pred CCCCCcHHHHH
Confidence 99999999876
No 126
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.58 E-value=1.1e-15 Score=148.39 Aligned_cols=90 Identities=21% Similarity=0.359 Sum_probs=79.7
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||+||+|+. .+|+.||||++.+.... ....+.+.+|+++|++++|||||++++++.+++..++||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5688899999999999999997 56999999999764321 223567999999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
|||++|+|.++|
T Consensus 112 Ey~~gG~L~~~i 123 (311)
T 4aw0_A 112 SYAKNGELLKYI 123 (311)
T ss_dssp CCCTTEEHHHHH
T ss_pred ecCCCCCHHHHH
Confidence 999999999986
No 127
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=1.2e-17 Score=152.54 Aligned_cols=130 Identities=28% Similarity=0.334 Sum_probs=103.9
Q ss_pred CCEeEEEcCCCCCcccccc------ccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCC
Q 040888 69 SSVTEIKLSGLGLNGQLGY------QLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSE 140 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~------~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~ 140 (495)
..++.++|+.+.+.|.+|. .+..+++|++|+|++|.+++ +| .+. ++|++|+|++|.++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 4566667777777777776 88889999999999999886 66 444 88999999999888 67777777888
Q ss_pred CcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCc-ccccCCCCCCEEeccCCcccccc
Q 040888 141 LKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELP-RSFASLSSLKKLYLQNNQFTGSI 203 (495)
Q Consensus 141 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~ 203 (495)
|++|+|++|++++ +| .+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+++.+
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccc
Confidence 9999999999886 44 57788889999999998885332 46788888899999888887764
No 128
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.57 E-value=1.5e-14 Score=138.02 Aligned_cols=127 Identities=24% Similarity=0.313 Sum_probs=112.4
Q ss_pred CCCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcc
Q 040888 68 GSSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLG 147 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 147 (495)
..+++.|+|++|.+++..+ +.++++|+.|+|++|++++ +|....++|++|+|++|++++. + .+..+++|+.|+|+
T Consensus 62 l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls 136 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPSACLSRLFLDNNELRDT-D-SLIHLKNLEILSIR 136 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCCSSCCEEECCSSCCSBS-G-GGTTCTTCCEEECT
T ss_pred CCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccccCcccEEEccCCccCCC-h-hhcCcccccEEECC
Confidence 3689999999999998765 9999999999999999997 3433338999999999999964 4 59999999999999
Q ss_pred cCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc
Q 040888 148 SNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI 203 (495)
Q Consensus 148 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 203 (495)
+|+|++. + .+..+++|+.|+|++|++++. ..+..+++|+.|++++|.+++..
T Consensus 137 ~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 137 NNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp TSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred CCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 9999975 4 688999999999999999976 67899999999999999998764
No 129
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.57 E-value=2.4e-15 Score=163.79 Aligned_cols=138 Identities=27% Similarity=0.261 Sum_probs=107.3
Q ss_pred CCCCcEEECcCCCCCCCC---------CCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhh
Q 040888 92 LKSVSYLDVSNNNLKDSI---------PYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQ 160 (495)
Q Consensus 92 l~~L~~L~Ls~N~l~g~~---------p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~ 160 (495)
...|+.++|+.|.+.+.. |..+. +.|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|.
T Consensus 190 ~~~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~ 267 (727)
T 4b8c_D 190 QALLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIK 267 (727)
T ss_dssp --------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGG
T ss_pred hhHhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhh
Confidence 345677888888776532 33333 78999999999999 78888889999999999999999 8999999
Q ss_pred CCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccCchhhhhc
Q 040888 161 KNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWVPEELKDI 232 (495)
Q Consensus 161 ~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l 232 (495)
.+++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+..+..++.++ |+.|+|++|.|+|.+|..+..+
T Consensus 268 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 268 NLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp GGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred CCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 9999999999999999 889999999999999999999986666688887 9999999999999999988654
No 130
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.57 E-value=3.3e-15 Score=150.88 Aligned_cols=89 Identities=22% Similarity=0.319 Sum_probs=78.8
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.+.|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+++|++++|||||++++++..++..|+||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 35688889999999999999998 4699999999976533 22456899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
|||++|+|.+++
T Consensus 228 Ey~~gG~L~~~i 239 (423)
T 4fie_A 228 EFLEGGALTDIV 239 (423)
T ss_dssp ECCTTEEHHHHH
T ss_pred eCCCCCcHHHHH
Confidence 999999999876
No 131
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.56 E-value=1.4e-14 Score=154.43 Aligned_cols=87 Identities=33% Similarity=0.352 Sum_probs=65.3
Q ss_pred CCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEee
Q 040888 139 SELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVE 217 (495)
Q Consensus 139 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~ 217 (495)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+..+..+..++ |+.|+|+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEec
Confidence 667778888887775 44 34577888888888887 4555 56778888888888885545566666 8888888
Q ss_pred cCCCcccCchhhhhcc
Q 040888 218 NNKFSGWVPEELKDIA 233 (495)
Q Consensus 218 ~N~l~g~~p~~l~~l~ 233 (495)
+|++++.+|..+..+.
T Consensus 293 ~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 293 GNPLSERTLQALREIT 308 (622)
T ss_dssp SCCCCHHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHhcc
Confidence 8888888888777665
No 132
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.56 E-value=3.4e-14 Score=151.45 Aligned_cols=71 Identities=34% Similarity=0.409 Sum_probs=41.5
Q ss_pred CCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCcc-CcEEEeecCCCcccCchhhhhcc-----cCC
Q 040888 163 EKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLP-LDELNVENNKFSGWVPEELKDIA-----KTG 236 (495)
Q Consensus 163 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l~-----~~~ 236 (495)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+.... .++ |+.|++++|.|+ .+|..+.+++ .+.
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 345555555555553 33 334556666666666664333 223 778888888887 6777777665 345
Q ss_pred CCcCC
Q 040888 237 GNSWS 241 (495)
Q Consensus 237 ~n~~~ 241 (495)
+|.+.
T Consensus 293 ~N~l~ 297 (622)
T 3g06_A 293 GNPLS 297 (622)
T ss_dssp SCCCC
T ss_pred CCCCC
Confidence 55544
No 133
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.56 E-value=2.8e-15 Score=146.05 Aligned_cols=86 Identities=27% Similarity=0.417 Sum_probs=69.3
Q ss_pred CCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC----EEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG----HNILI 481 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv 481 (495)
++...+.||+|+||+||+|++ +|+.||||++..... ....+.+|+..+.+++|||||+++|+|..++ ..++|
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~---~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch---hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 355678999999999999998 588999999965321 1223445666667899999999999998754 57999
Q ss_pred EEecCCCCHhhhhC
Q 040888 482 YDYYRNGSLHEFLH 495 (495)
Q Consensus 482 ~ey~~~GsL~~~L~ 495 (495)
||||++|+|.++|+
T Consensus 80 ~Ey~~~gsL~~~l~ 93 (303)
T 3hmm_A 80 SDYHEHGSLFDYLN 93 (303)
T ss_dssp EECCTTCBHHHHHH
T ss_pred ecCCCCCcHHHHHH
Confidence 99999999999874
No 134
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.55 E-value=1.7e-14 Score=152.48 Aligned_cols=141 Identities=23% Similarity=0.261 Sum_probs=114.3
Q ss_pred CccccccccCCCCCCcEEE-CcCCCCCCCCCC---------CC-CCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccC
Q 040888 81 LNGQLGYQLTNLKSVSYLD-VSNNNLKDSIPY---------QL-PPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSN 149 (495)
Q Consensus 81 l~g~~~~~~~~l~~L~~L~-Ls~N~l~g~~p~---------~~-~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 149 (495)
+.|.+|..++++++|+.|| ++.|.+.. ++. .+ ...|+.|+|++|+|++ +|. ++.+++|+.|+|++|
T Consensus 397 ~~~~~~~~l~~l~~L~~L~~l~~n~~~~-L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N 473 (567)
T 1dce_A 397 PLLYEKETLQYFSTLKAVDPMRAAYLDD-LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHN 473 (567)
T ss_dssp TGGGHHHHHHHHHHHHHHCGGGHHHHHH-HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSS
T ss_pred cccCCHHHHHHHHhcccCcchhhcccch-hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCcc
Confidence 3455566778888888888 56654321 110 01 1468999999999996 676 999999999999999
Q ss_pred cCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCccccc--ccccCCcc-CcEEEeecCCCcccCc
Q 040888 150 QLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGS--INVLGKLP-LDELNVENNKFSGWVP 226 (495)
Q Consensus 150 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~--~~~~~~~~-L~~l~l~~N~l~g~~p 226 (495)
+|+ .+|..++.+++|+.|+|++|+|++ +| .++++++|+.|+|++|+|++. +..++.++ |+.|+|++|.|++.+|
T Consensus 474 ~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 474 RLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred ccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 999 889999999999999999999996 67 899999999999999999988 56777777 9999999999998766
Q ss_pred h
Q 040888 227 E 227 (495)
Q Consensus 227 ~ 227 (495)
.
T Consensus 551 ~ 551 (567)
T 1dce_A 551 I 551 (567)
T ss_dssp C
T ss_pred H
Confidence 3
No 135
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.55 E-value=1e-14 Score=154.16 Aligned_cols=118 Identities=24% Similarity=0.336 Sum_probs=97.0
Q ss_pred CCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEcc
Q 040888 94 SVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLS 171 (495)
Q Consensus 94 ~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls 171 (495)
.|+.|+|++|.|++ +|. +. ++|+.|+|++|+|+ .+|..++++++|+.|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 48889999998886 665 54 78999999999998 788889999999999999999987 66 78889999999999
Q ss_pred CCcCCCcC-cccccCCCCCCEEeccCCcccccccccCC----cc-CcEEEe
Q 040888 172 KNQLTGEL-PRSFASLSSLKKLYLQNNQFTGSINVLGK----LP-LDELNV 216 (495)
Q Consensus 172 ~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~g~~~~~~~----~~-L~~l~l 216 (495)
+|+|++.+ |..++.+++|+.|+|++|+|++.++.... ++ |+.|++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99998876 88899999999999999999887643322 34 677653
No 136
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=8.2e-15 Score=130.93 Aligned_cols=128 Identities=20% Similarity=0.224 Sum_probs=108.7
Q ss_pred CCEeEEEcCCCCCccccccccCCCC-CCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLK-SVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
.+++.|+|++|+++. ++. +..+. +|++|||++|.+++. ..+. ++|++|+|++|+|++..|..+..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 579999999999995 454 55555 999999999999975 3343 8999999999999965555569999999999
Q ss_pred cccCcCCCccch--hhhCCCCCcEEEccCCcCCCcCccc----ccCCCCCCEEeccCCccccc
Q 040888 146 LGSNQLNGQLSD--MFQKNEKLETLDLSKNQLTGELPRS----FASLSSLKKLYLQNNQFTGS 202 (495)
Q Consensus 146 L~~N~l~g~~p~--~~~~l~~L~~L~ls~N~l~g~~p~~----~~~l~~L~~L~l~~N~l~g~ 202 (495)
|++|+|+ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.||+++|.+...
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~~ 155 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKER 155 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHHH
Confidence 9999996 4665 7899999999999999998 56764 89999999999999987643
No 137
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.54 E-value=1.5e-15 Score=147.26 Aligned_cols=90 Identities=22% Similarity=0.355 Sum_probs=73.1
Q ss_pred cCCcccceeccCCceEEEEEEc----CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY----PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
++|...+.||+|+||+||+|+. ..++.||||+++...........+.+|+++|++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4688899999999999999986 247899999998654433334578899999999999999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
|||||++|+|.++|
T Consensus 104 vmEy~~gg~L~~~l 117 (304)
T 3ubd_A 104 ILDFLRGGDLFTRL 117 (304)
T ss_dssp EECCCTTCEEHHHH
T ss_pred EEEcCCCCCHHHHH
Confidence 99999999999886
No 138
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.54 E-value=6.5e-15 Score=143.00 Aligned_cols=89 Identities=21% Similarity=0.336 Sum_probs=73.6
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC-------
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG------- 476 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------- 476 (495)
++|+..+.||+|+||+||+|+. .+|+.||||+++.... ....+.+.+|+++|++++|||||++++++...+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 4688889999999999999997 4699999999975432 223567999999999999999999999997644
Q ss_pred -----EEEEEEEecCCCCHhhhh
Q 040888 477 -----HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 -----~~~lv~ey~~~GsL~~~L 494 (495)
..++|||||++|+|.+++
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l 106 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWM 106 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHH
T ss_pred cCCCcEEEEEEecCCCCcHHHHH
Confidence 368999999999999886
No 139
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.54 E-value=1.2e-15 Score=152.56 Aligned_cols=154 Identities=24% Similarity=0.306 Sum_probs=93.2
Q ss_pred CEeEEEcCCCCCccccc----cccCCCC-CCcEEECcCCCCCCCCCCCC-------CCCCcEEECcCCcCCCCcchhcc-
Q 040888 70 SVTEIKLSGLGLNGQLG----YQLTNLK-SVSYLDVSNNNLKDSIPYQL-------PPNLKHLDLSENQFSGTVPYSIS- 136 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~----~~~~~l~-~L~~L~Ls~N~l~g~~p~~~-------~~~L~~L~Ls~N~l~g~~p~~~~- 136 (495)
+++.|+|++|.+++..+ ..+.+++ +|++|+|++|.+++..+..+ .++|++|+|++|.+++..+..+.
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 47777777777766555 5566666 67777777777765444222 15677777777777666555433
Q ss_pred ---CC-CCCcEEEcccCcCCCccchhhh----C-CCCCcEEEccCCcCCCcC----cccccCCC-CCCEEeccCCccccc
Q 040888 137 ---QM-SELKYLNLGSNQLNGQLSDMFQ----K-NEKLETLDLSKNQLTGEL----PRSFASLS-SLKKLYLQNNQFTGS 202 (495)
Q Consensus 137 ---~l-~~L~~L~L~~N~l~g~~p~~~~----~-l~~L~~L~ls~N~l~g~~----p~~~~~l~-~L~~L~l~~N~l~g~ 202 (495)
.+ ++|++|+|++|+|++..+..+. . .++|++|+|++|.+++.. +..+..++ +|++|+|++|++++.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~ 182 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASK 182 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchh
Confidence 33 6777777777777665554433 2 256777777777776432 33334444 677777777777654
Q ss_pred c-c----ccCCc--cCcEEEeecCCCcc
Q 040888 203 I-N----VLGKL--PLDELNVENNKFSG 223 (495)
Q Consensus 203 ~-~----~~~~~--~L~~l~l~~N~l~g 223 (495)
. . .+... .|+.|++++|.+++
T Consensus 183 ~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 183 NCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred hHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 4 1 12222 36777777777665
No 140
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.53 E-value=1.4e-15 Score=152.28 Aligned_cols=159 Identities=23% Similarity=0.254 Sum_probs=130.0
Q ss_pred EEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCC----CCCC--C-CCcEEECcCCcCCCCcchhccCC-----CC
Q 040888 73 EIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIP----YQLP--P-NLKHLDLSENQFSGTVPYSISQM-----SE 140 (495)
Q Consensus 73 ~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p----~~~~--~-~L~~L~Ls~N~l~g~~p~~~~~l-----~~ 140 (495)
..+|+.|+++|.+|..+...++|++|||++|.+++..+ ..+. + +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46889999999999988888889999999999987554 2222 4 89999999999998888887775 99
Q ss_pred CcEEEcccCcCCCccchhhh----CC-CCCcEEEccCCcCCCcCccccc----C-CCCCCEEeccCCcccccc-----cc
Q 040888 141 LKYLNLGSNQLNGQLSDMFQ----KN-EKLETLDLSKNQLTGELPRSFA----S-LSSLKKLYLQNNQFTGSI-----NV 205 (495)
Q Consensus 141 L~~L~L~~N~l~g~~p~~~~----~l-~~L~~L~ls~N~l~g~~p~~~~----~-l~~L~~L~l~~N~l~g~~-----~~ 205 (495)
|++|+|++|.+++..+..+. .+ ++|+.|+|++|.+++..+..+. . .++|++|+|++|.+++.. ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 99999999999988776544 44 8999999999999987665543 3 369999999999998533 22
Q ss_pred cCCc--cCcEEEeecCCCcccCchhhhh
Q 040888 206 LGKL--PLDELNVENNKFSGWVPEELKD 231 (495)
Q Consensus 206 ~~~~--~L~~l~l~~N~l~g~~p~~l~~ 231 (495)
+... .|+.|++++|.+++..+..+..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 189 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAK 189 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHH
Confidence 3333 3999999999999988876654
No 141
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.53 E-value=1.7e-14 Score=137.84 Aligned_cols=89 Identities=21% Similarity=0.415 Sum_probs=72.9
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||+||+|.. .+|+.||||+++...... ...+.+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5788899999999999999997 469999999997654322 23567999999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+ +|+|.++|
T Consensus 93 Ey~-~g~L~~~l 103 (275)
T 3hyh_A 93 EYA-GNELFDYI 103 (275)
T ss_dssp ECC-CEEHHHHH
T ss_pred eCC-CCCHHHHH
Confidence 999 68998876
No 142
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.52 E-value=7e-15 Score=145.89 Aligned_cols=100 Identities=21% Similarity=0.429 Sum_probs=82.1
Q ss_pred ccHHHHHHhccCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCC-CCcce
Q 040888 395 FSMADLLTATANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRH-TNIAE 467 (495)
Q Consensus 395 ~~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H-~niv~ 467 (495)
+...+++...++|...+.||+|+||+||+|.+. .++.||||++...... ...++|.+|+++|.+++| ||||+
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~-~~~~~~~~E~~il~~l~hhpnIV~ 132 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVN 132 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCH-HHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccCh-HHHHHHHHHHHHHHHcCCCCcEEE
Confidence 344566667788999999999999999999863 2458999999765432 235689999999999966 89999
Q ss_pred EEEEEEeC-CEEEEEEEecCCCCHhhhhC
Q 040888 468 LVGFCSEQ-GHNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 468 l~g~~~~~-~~~~lv~ey~~~GsL~~~L~ 495 (495)
++|+|.+. +..++|||||++|+|.++|+
T Consensus 133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~ 161 (353)
T 4ase_A 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLR 161 (353)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHH
T ss_pred EEEEEEecCCEEEEEEEcCCCCCHHHHHH
Confidence 99999764 56899999999999999873
No 143
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.52 E-value=9.2e-15 Score=143.53 Aligned_cols=85 Identities=24% Similarity=0.284 Sum_probs=74.5
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.+.|...+.||+|+||+||+|+. .+|+.||||+++.... +.+|++++++++|||||++++++.+++..++||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 34577788999999999999997 4699999999975432 246999999999999999999999999999999
Q ss_pred EecCCCCHhhhhC
Q 040888 483 DYYRNGSLHEFLH 495 (495)
Q Consensus 483 ey~~~GsL~~~L~ 495 (495)
|||++|+|.++|+
T Consensus 130 Ey~~gg~L~~~l~ 142 (336)
T 4g3f_A 130 ELLEGGSLGQLIK 142 (336)
T ss_dssp CCCTTCBHHHHHH
T ss_pred eccCCCcHHHHHH
Confidence 9999999999873
No 144
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=1e-13 Score=123.11 Aligned_cols=106 Identities=22% Similarity=0.264 Sum_probs=92.0
Q ss_pred eEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccC
Q 040888 72 TEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSN 149 (495)
Q Consensus 72 ~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 149 (495)
+.|++++|+|+. +|..+. ++|++|+|++|+|++..|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 456667777775 565553 8899999999999988887775 89999999999999887778899999999999999
Q ss_pred cCCCccchhhhCCCCCcEEEccCCcCCCcCc
Q 040888 150 QLNGQLSDMFQKNEKLETLDLSKNQLTGELP 180 (495)
Q Consensus 150 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 180 (495)
+|++..+..|..+++|+.|+|++|.++...+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9998888889999999999999999986543
No 145
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=2e-13 Score=121.65 Aligned_cols=104 Identities=19% Similarity=0.252 Sum_probs=92.4
Q ss_pred eEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccC
Q 040888 72 TEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSN 149 (495)
Q Consensus 72 ~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 149 (495)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67889999985 5676664 8999999999999988887775 89999999999999877777899999999999999
Q ss_pred cCCCccchhhhCCCCCcEEEccCCcCCCc
Q 040888 150 QLNGQLSDMFQKNEKLETLDLSKNQLTGE 178 (495)
Q Consensus 150 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 178 (495)
+|++..+..|..+++|++|+|++|.+...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 99987777799999999999999999854
No 146
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=2.1e-16 Score=144.20 Aligned_cols=134 Identities=31% Similarity=0.419 Sum_probs=117.4
Q ss_pred cCCCCCCcEEECcCCCCCCCCCC------CCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhh
Q 040888 89 LTNLKSVSYLDVSNNNLKDSIPY------QLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQ 160 (495)
Q Consensus 89 ~~~l~~L~~L~Ls~N~l~g~~p~------~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~ 160 (495)
+.....++.++|+.|.++|.+|. .+. ++|++|+|++|.+++ +| .+..+++|++|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45567889999999999998886 443 799999999999997 77 8999999999999999999 6788888
Q ss_pred CCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc--cccCCcc-CcEEEeecCCCcccCch
Q 040888 161 KNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI--NVLGKLP-LDELNVENNKFSGWVPE 227 (495)
Q Consensus 161 ~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~--~~~~~~~-L~~l~l~~N~l~g~~p~ 227 (495)
.+++|+.|+|++|++++ +| .+..+++|+.|+|++|++++.. ..+..++ |+.|++++|.+++.+|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 88999999999999996 55 6889999999999999999744 4677777 99999999999988775
No 147
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.44 E-value=1e-14 Score=150.44 Aligned_cols=87 Identities=21% Similarity=0.247 Sum_probs=39.9
Q ss_pred CCCcEEECcCCcCCCC----cchhccCCCCCcEEEcccCcCCCccchhhhC-----CCCCcEEEccCCcCCCc----Ccc
Q 040888 115 PNLKHLDLSENQFSGT----VPYSISQMSELKYLNLGSNQLNGQLSDMFQK-----NEKLETLDLSKNQLTGE----LPR 181 (495)
Q Consensus 115 ~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~-----l~~L~~L~ls~N~l~g~----~p~ 181 (495)
++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|+|++|.+++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 3455555555544432 3444444455555555555544332222221 13455555555555433 334
Q ss_pred cccCCCCCCEEeccCCcccc
Q 040888 182 SFASLSSLKKLYLQNNQFTG 201 (495)
Q Consensus 182 ~~~~l~~L~~L~l~~N~l~g 201 (495)
.+..+++|+.|+|++|.+++
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHH
T ss_pred HHhhCCCccEEEccCCcccc
Confidence 44445555555555555543
No 148
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.43 E-value=1.4e-14 Score=149.52 Aligned_cols=164 Identities=23% Similarity=0.227 Sum_probs=128.8
Q ss_pred CEeEEEcCCCCCcc----ccccccCCCCCCcEEECcCCCCCCCCCCCC-------CCCCcEEECcCCcCCCC----cchh
Q 040888 70 SVTEIKLSGLGLNG----QLGYQLTNLKSVSYLDVSNNNLKDSIPYQL-------PPNLKHLDLSENQFSGT----VPYS 134 (495)
Q Consensus 70 ~v~~l~L~~n~l~g----~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~-------~~~L~~L~Ls~N~l~g~----~p~~ 134 (495)
+++.|+|++|.++. .++..+..+++|++|+|++|.+++..+..+ .++|++|+|++|++++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 69999999999984 678899999999999999999875433221 24799999999999874 4666
Q ss_pred ccCCCCCcEEEcccCcCCCccchhhh-----CCCCCcEEEccCCcCCCc----CcccccCCCCCCEEeccCCcccccc--
Q 040888 135 ISQMSELKYLNLGSNQLNGQLSDMFQ-----KNEKLETLDLSKNQLTGE----LPRSFASLSSLKKLYLQNNQFTGSI-- 203 (495)
Q Consensus 135 ~~~l~~L~~L~L~~N~l~g~~p~~~~-----~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~-- 203 (495)
+..+++|+.|+|++|.++...+..+. ..++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++..
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 77889999999999999866554443 366899999999999874 6778888999999999999987642
Q ss_pred ---cc-cCCcc-CcEEEeecCCCccc----Cchhhhhcc
Q 040888 204 ---NV-LGKLP-LDELNVENNKFSGW----VPEELKDIA 233 (495)
Q Consensus 204 ---~~-~~~~~-L~~l~l~~N~l~g~----~p~~l~~l~ 233 (495)
+. ....+ |+.|++++|.+++. +|..+..++
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~ 284 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKE 284 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCT
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCC
Confidence 11 22344 99999999999875 566655544
No 149
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.43 E-value=1.4e-13 Score=138.78 Aligned_cols=90 Identities=20% Similarity=0.333 Sum_probs=75.7
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC------CE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ------GH 477 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~------~~ 477 (495)
++|...+.||+|+||+||+|.. .+|+.||||+++.........+.+.+|+++|++++|||||++++++... +.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4688899999999999999997 5699999999976543333356789999999999999999999998643 56
Q ss_pred EEEEEEecCCCCHhhhhC
Q 040888 478 NILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L~ 495 (495)
.++|||||+ |+|.++++
T Consensus 134 ~~ivmE~~~-g~L~~~i~ 150 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIH 150 (398)
T ss_dssp EEEEEECCS-EEHHHHHT
T ss_pred EEEEEeCCC-CCHHHHHH
Confidence 899999996 78988763
No 150
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.41 E-value=3.3e-13 Score=142.75 Aligned_cols=89 Identities=24% Similarity=0.429 Sum_probs=79.2
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|.. .+|+.||+|.+..... ...+.+.+|+++|++++|||||++++++.+++..++||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~--~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE--SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch--hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 46788899999999999999998 4699999999976432 23567889999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
|||++|+|.++|
T Consensus 234 E~~~gg~L~~~i 245 (573)
T 3uto_A 234 EFMSGGELFEKV 245 (573)
T ss_dssp ECCCCCBHHHHH
T ss_pred eecCCCcHHHHH
Confidence 999999999876
No 151
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.41 E-value=1.5e-13 Score=134.99 Aligned_cols=102 Identities=34% Similarity=0.626 Sum_probs=89.1
Q ss_pred CCcccHHHHHHhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEE
Q 040888 392 AAPFSMADLLTATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGF 471 (495)
Q Consensus 392 ~~~~~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~ 471 (495)
...+++.++..++++|...+.||+|+||.||+|...+|+.||||++....... ....|.+|++++.+++||||++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch-HHHHHHHHHHHHHhccCCCccceEEE
Confidence 34688899999999999999999999999999998889999999997654321 23468999999999999999999999
Q ss_pred EEeCCEEEEEEEecCCCCHhhhh
Q 040888 472 CSEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 472 ~~~~~~~~lv~ey~~~GsL~~~L 494 (495)
|...+..++||||+++|+|.+++
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l 118 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCL 118 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHH
T ss_pred EecCCceEEEEEeccCCCHHHHH
Confidence 99999999999999999999876
No 152
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.40 E-value=4e-13 Score=133.62 Aligned_cols=165 Identities=17% Similarity=0.131 Sum_probs=131.3
Q ss_pred CCCEeEEEcCCCCCcccccc-ccCCCCCCcE-EECcCCCCCCCCCCCCC--CCCcEEECcCCcCCCCcchhccCCCCCcE
Q 040888 68 GSSVTEIKLSGLGLNGQLGY-QLTNLKSVSY-LDVSNNNLKDSIPYQLP--PNLKHLDLSENQFSGTVPYSISQMSELKY 143 (495)
Q Consensus 68 ~~~v~~l~L~~n~l~g~~~~-~~~~l~~L~~-L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 143 (495)
..+++.|+|++|.+.+.+|. .|.++++|.. ++++.|++....|..+. ++|++|++++|++++..+..+....++..
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 36899999999999887765 6889998775 67778999976666665 89999999999999877777888888999
Q ss_pred EEccc-CcCCCccchhhhCCC-CCcEEEccCCcCCCcCcccccCCCCCCEEeccC-Ccccccc-cccCCcc-CcEEEeec
Q 040888 144 LNLGS-NQLNGQLSDMFQKNE-KLETLDLSKNQLTGELPRSFASLSSLKKLYLQN-NQFTGSI-NVLGKLP-LDELNVEN 218 (495)
Q Consensus 144 L~L~~-N~l~g~~p~~~~~l~-~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~-N~l~g~~-~~~~~~~-L~~l~l~~ 218 (495)
|++.+ |++....+..|..+. .|+.|+|++|+|+ .+|.......+|+.|++++ |.++... ..+..++ |+.||+++
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~ 211 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISR 211 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTT
T ss_pred hhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCC
Confidence 99976 567665556676664 6899999999999 5566555677899999986 5565544 4567777 99999999
Q ss_pred CCCcccCchhhhhcc
Q 040888 219 NKFSGWVPEELKDIA 233 (495)
Q Consensus 219 N~l~g~~p~~l~~l~ 233 (495)
|+|+...+..+.++.
T Consensus 212 N~l~~lp~~~~~~L~ 226 (350)
T 4ay9_X 212 TRIHSLPSYGLENLK 226 (350)
T ss_dssp SCCCCCCSSSCTTCC
T ss_pred CCcCccChhhhccch
Confidence 999966555566655
No 153
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.40 E-value=1.9e-13 Score=134.13 Aligned_cols=98 Identities=36% Similarity=0.650 Sum_probs=86.6
Q ss_pred ccHHHHHHhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe
Q 040888 395 FSMADLLTATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE 474 (495)
Q Consensus 395 ~~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~ 474 (495)
+.+.++..++++|...+.||+|+||.||+|+.++++.||||++..... ...+.|.+|++++++++||||++++++|..
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS--QGIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS--SHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 455666778899999999999999999999998899999999876432 235789999999999999999999999999
Q ss_pred CCEEEEEEEecCCCCHhhhh
Q 040888 475 QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 475 ~~~~~lv~ey~~~GsL~~~L 494 (495)
.+..++||||+++|+|.+++
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l 126 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHL 126 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGS
T ss_pred CCeEEEEEEcCCCCcHHHHH
Confidence 99999999999999999876
No 154
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.40 E-value=8.5e-13 Score=130.97 Aligned_cols=85 Identities=25% Similarity=0.294 Sum_probs=55.9
Q ss_pred CCcEEECcC-CcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEec
Q 040888 116 NLKHLDLSE-NQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYL 194 (495)
Q Consensus 116 ~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 194 (495)
+|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..++ |+.|+|
T Consensus 32 ~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l 110 (347)
T 2ifg_A 32 NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVL 110 (347)
T ss_dssp CCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEEC
T ss_pred CeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEe
Confidence 344444443 455545556677777777777777777777777777777777777777777755555555554 777777
Q ss_pred cCCcccc
Q 040888 195 QNNQFTG 201 (495)
Q Consensus 195 ~~N~l~g 201 (495)
++|.|..
T Consensus 111 ~~N~~~c 117 (347)
T 2ifg_A 111 SGNPLHC 117 (347)
T ss_dssp CSSCCCC
T ss_pred eCCCccC
Confidence 7777653
No 155
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.39 E-value=1e-12 Score=129.02 Aligned_cols=101 Identities=19% Similarity=0.248 Sum_probs=86.5
Q ss_pred CcccHHHHHHhccC----------CcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCC
Q 040888 393 APFSMADLLTATAN----------FATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR 461 (495)
Q Consensus 393 ~~~~~~~~~~~t~~----------f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~ 461 (495)
..++++++..+++. |...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++.+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~ 100 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQ 100 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CSHHHHHHHHHHHTTCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch--hHHHHHHHHHHHHHhCC
Confidence 45788998888865 566678999999999999985 699999999975432 23567999999999999
Q ss_pred CCCcceEEEEEEeCCEEEEEEEecCCCCHhhhhC
Q 040888 462 HTNIAELVGFCSEQGHNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 462 H~niv~l~g~~~~~~~~~lv~ey~~~GsL~~~L~ 495 (495)
||||++++++|...+..++||||+++|+|.++++
T Consensus 101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 134 (321)
T 2c30_A 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS 134 (321)
T ss_dssp CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT
T ss_pred CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH
Confidence 9999999999999999999999999999998763
No 156
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.38 E-value=7.9e-13 Score=131.76 Aligned_cols=92 Identities=17% Similarity=0.270 Sum_probs=78.6
Q ss_pred HHHhccCCcccceeccCCceEEEEEEcC----CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEe
Q 040888 400 LLTATANFATGRLLGEGTIGRVYRAKYP----DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSE 474 (495)
Q Consensus 400 ~~~~t~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~ 474 (495)
+....+.|...+.||+|+||+||+|+.+ .++.||||++.... ....+.+|+++|.++ +|||||++++++..
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 3345678999999999999999999752 46789999986542 245688999999998 69999999999999
Q ss_pred CCEEEEEEEecCCCCHhhhhC
Q 040888 475 QGHNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 475 ~~~~~lv~ey~~~GsL~~~L~ 495 (495)
.+..++|||||++|+|.++++
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~ 112 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN 112 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT
T ss_pred CCEEEEEEeCCCcccHHHHHc
Confidence 999999999999999998763
No 157
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.37 E-value=1.7e-12 Score=126.36 Aligned_cols=102 Identities=31% Similarity=0.512 Sum_probs=89.0
Q ss_pred CCcccHHHHHHhccCCccc------ceeccCCceEEEEEEcCCCCEEEEEEecCccc--ccccHHHHHHHHHHHhcCCCC
Q 040888 392 AAPFSMADLLTATANFATG------RLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHF--QRANSESFSEIVQNISRIRHT 463 (495)
Q Consensus 392 ~~~~~~~~~~~~t~~f~~~------~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~f~~e~~~l~~l~H~ 463 (495)
...|++.++..++++|+.. +.||+|+||.||+|.. +++.||||++..... .....+.|.+|++++.+++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3568999999999999987 8999999999999998 688999999875421 122356799999999999999
Q ss_pred CcceEEEEEEeCCEEEEEEEecCCCCHhhhh
Q 040888 464 NIAELVGFCSEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 464 niv~l~g~~~~~~~~~lv~ey~~~GsL~~~L 494 (495)
||+++++++...+..++||||+++|+|.+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 121 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHH
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHH
Confidence 9999999999988999999999999998875
No 158
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.37 E-value=1.2e-12 Score=129.86 Aligned_cols=105 Identities=18% Similarity=0.198 Sum_probs=94.0
Q ss_pred EEECcCC-cCCCCcchhccCCCCCcEEEccc-CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccC
Q 040888 119 HLDLSEN-QFSGTVPYSISQMSELKYLNLGS-NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQN 196 (495)
Q Consensus 119 ~L~Ls~N-~l~g~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 196 (495)
.++++++ +|+ .+|. +..+++|+.|+|++ |+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4677777 787 4787 99999999999996 999999889999999999999999999999999999999999999999
Q ss_pred Ccccccc-cccCCccCcEEEeecCCCcccC
Q 040888 197 NQFTGSI-NVLGKLPLDELNVENNKFSGWV 225 (495)
Q Consensus 197 N~l~g~~-~~~~~~~L~~l~l~~N~l~g~~ 225 (495)
|+|++.+ ..+..++|+.|+|++|.|...-
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCCC
Confidence 9999887 4556667999999999998643
No 159
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.35 E-value=1.3e-12 Score=128.78 Aligned_cols=92 Identities=22% Similarity=0.393 Sum_probs=81.1
Q ss_pred hccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
..++|...+.||+|+||.||+|.. .+|+.||||++..........+.+.+|++++++++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 356788899999999999999997 5799999999976543333456789999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 93 ~e~~~~~~L~~~l 105 (328)
T 3fe3_A 93 MEYASGGEVFDYL 105 (328)
T ss_dssp ECCCTTCBHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 9999999999876
No 160
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=3.4e-14 Score=142.34 Aligned_cols=163 Identities=18% Similarity=0.216 Sum_probs=124.0
Q ss_pred CCEeEEEcCCCCCcccccccc----C-CCCCCcEEECcCCCCCCCCCCCCC---CCCcEEECcCCcCCCCcchhc-----
Q 040888 69 SSVTEIKLSGLGLNGQLGYQL----T-NLKSVSYLDVSNNNLKDSIPYQLP---PNLKHLDLSENQFSGTVPYSI----- 135 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~----~-~l~~L~~L~Ls~N~l~g~~p~~~~---~~L~~L~Ls~N~l~g~~p~~~----- 135 (495)
..++.|+|++|.++......+ . +.++|+.|||++|.++......+. ++|+.|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 579999999999987544333 3 237999999999998753332232 689999999999986544444
Q ss_pred cCCCCCcEEEcccCcCCC----ccchhhhCCCCCcEEEccCCcCCCc----CcccccCCCCCCEEeccCCcccccc----
Q 040888 136 SQMSELKYLNLGSNQLNG----QLSDMFQKNEKLETLDLSKNQLTGE----LPRSFASLSSLKKLYLQNNQFTGSI---- 203 (495)
Q Consensus 136 ~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~---- 203 (495)
...++|+.|+|++|.|+. .++..+..+++|++|+|++|.|+.. ++..+...++|+.|+|++|.++...
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 357899999999999975 3556668899999999999999853 3566778889999999999998532
Q ss_pred -cccCCcc-CcEEEeecCCCcccCchhhhh
Q 040888 204 -NVLGKLP-LDELNVENNKFSGWVPEELKD 231 (495)
Q Consensus 204 -~~~~~~~-L~~l~l~~N~l~g~~p~~l~~ 231 (495)
..+...+ |+.|+|++|.++..-...+..
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 2232233 999999999998655555544
No 161
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.32 E-value=1.9e-12 Score=137.00 Aligned_cols=91 Identities=22% Similarity=0.318 Sum_probs=75.1
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHH---HHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESF---SEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f---~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
.++|...++||+|+||+||+|+.. +|+.||||++.+..... ...... ..++++++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 467999999999999999999984 69999999997543211 112223 3446778889999999999999999999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
|+|||||++|+|.++|
T Consensus 268 ylVmEy~~GGdL~~~l 283 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHL 283 (689)
T ss_dssp EEEECCCCSCBHHHHH
T ss_pred EEEEecCCCCcHHHHH
Confidence 9999999999999886
No 162
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.32 E-value=1.1e-12 Score=128.01 Aligned_cols=92 Identities=26% Similarity=0.448 Sum_probs=80.1
Q ss_pred HhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 402 TATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 402 ~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
...++|...+.||+|+||.||+|+. .|+.||||++..........++|.+|++++.+++||||+++++++...+..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3456788889999999999999987 678899999976544333456799999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 113 ~e~~~~~~L~~~l 125 (309)
T 3p86_A 113 TEYLSRGSLYRLL 125 (309)
T ss_dssp EECCTTCBHHHHH
T ss_pred EecCCCCcHHHHH
Confidence 9999999999876
No 163
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.32 E-value=3.9e-12 Score=124.00 Aligned_cols=88 Identities=19% Similarity=0.448 Sum_probs=77.6
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|... ++..||+|++.... ....+.|.+|++++.+++||||++++++|..++..++|||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD--EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 45777899999999999999984 68999999986532 2335789999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 88 ~~~~~~L~~~l 98 (310)
T 3s95_A 88 YIKGGTLRGII 98 (310)
T ss_dssp CCTTCBHHHHH
T ss_pred ecCCCcHHHHH
Confidence 99999999876
No 164
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.31 E-value=9.9e-13 Score=134.56 Aligned_cols=99 Identities=23% Similarity=0.342 Sum_probs=84.2
Q ss_pred cHHHHHHhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEE
Q 040888 396 SMADLLTATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCS 473 (495)
Q Consensus 396 ~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~ 473 (495)
.+.++...+++|...++||+|+||+||+|+.. +++.||||++...... ....+.+.+|+.++..++|||||+++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 45666677889999999999999999999985 4889999999753221 112334889999999999999999999999
Q ss_pred eCCEEEEEEEecCCCCHhhhh
Q 040888 474 EQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 474 ~~~~~~lv~ey~~~GsL~~~L 494 (495)
+.+..++|||||++|+|.++|
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l 165 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLL 165 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHH
T ss_pred eCCEEEEEEecCCCCcHHHHH
Confidence 999999999999999999886
No 165
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.31 E-value=3.8e-12 Score=122.81 Aligned_cols=91 Identities=14% Similarity=0.189 Sum_probs=79.0
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
+.|...+.||+|+||.||+|... +++.||||.+...... ....+.|.+|++.+.+++||||+++++++..++..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 45777899999999999999985 4899999999765332 123467999999999999999999999999999999999
Q ss_pred EecCCCCHhhhhC
Q 040888 483 DYYRNGSLHEFLH 495 (495)
Q Consensus 483 ey~~~GsL~~~L~ 495 (495)
||+++|+|.++++
T Consensus 111 e~~~g~~L~~~l~ 123 (286)
T 3uqc_A 111 EWIRGGSLQEVAD 123 (286)
T ss_dssp ECCCEEEHHHHHT
T ss_pred EecCCCCHHHHHh
Confidence 9999999998863
No 166
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.30 E-value=7.9e-12 Score=121.20 Aligned_cols=89 Identities=17% Similarity=0.316 Sum_probs=78.6
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.++.+++|||||++++++...+..++||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc--cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 35688889999999999999997 5689999999875432 23567899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 97 e~~~~~~L~~~~ 108 (297)
T 3fxz_A 97 EYLAGGSLTDVV 108 (297)
T ss_dssp ECCTTCBHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 999999999875
No 167
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.30 E-value=1.9e-12 Score=129.93 Aligned_cols=89 Identities=22% Similarity=0.435 Sum_probs=77.0
Q ss_pred cCCcccceeccCCceEEEEEEcC----CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP----DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
++|...+.||+|+||.||+|+.. ++..||||+++.... ....++|.+|++++++++|||||+++++|...+..++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 46888899999999999999874 477899999976432 2235689999999999999999999999999889999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 124 v~e~~~~~sL~~~l 137 (373)
T 2qol_A 124 VTEYMENGSLDSFL 137 (373)
T ss_dssp EEECCTTCBHHHHH
T ss_pred EEeCCCCCcHHHHH
Confidence 99999999999886
No 168
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.30 E-value=4.6e-12 Score=120.79 Aligned_cols=87 Identities=23% Similarity=0.489 Sum_probs=78.1
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
++|...+.||+|+||.||+|...+++.||+|++..... ..+++.+|++++.+++||||+++++++...+..++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc---CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 45677899999999999999998888999999976532 246799999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 87 ~~~~~L~~~l 96 (269)
T 4hcu_A 87 MEHGCLSDYL 96 (269)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999999876
No 169
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.29 E-value=4.7e-12 Score=124.28 Aligned_cols=71 Identities=23% Similarity=0.336 Sum_probs=59.1
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG 476 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (495)
++|...+.||+|+||.||+|+.. +|+.||||++..... ....+.+.+|++++++++|||||+++++|.+.+
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 77 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPGIVRYFNAWLETP 77 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST-TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECC
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEec
Confidence 46778899999999999999985 799999999975432 223578999999999999999999999986643
No 170
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.29 E-value=1.6e-12 Score=131.94 Aligned_cols=98 Identities=18% Similarity=0.305 Sum_probs=83.1
Q ss_pred HHHHHHhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEe
Q 040888 397 MADLLTATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSE 474 (495)
Q Consensus 397 ~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~ 474 (495)
+.++....++|...+.||+|+||+||+|+.. +++.||+|++..... .....+.+.+|++++..++|||||+++++|.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3555666788999999999999999999985 589999999975322 11223458899999999999999999999999
Q ss_pred CCEEEEEEEecCCCCHhhhh
Q 040888 475 QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 475 ~~~~~lv~ey~~~GsL~~~L 494 (495)
.+..++|||||++|+|.+++
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l 160 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLM 160 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHH
T ss_pred CCEEEEEEeCCCCCcHHHHH
Confidence 99999999999999999876
No 171
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.29 E-value=4.1e-12 Score=126.90 Aligned_cols=91 Identities=22% Similarity=0.359 Sum_probs=79.7
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|... +|+.||+|.+..........+.+.+|++++.+++|||||++++++...+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456888899999999999999974 6899999999765433333567899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 108 e~~~gg~L~~~l 119 (362)
T 2bdw_A 108 DLVTGGELFEDI 119 (362)
T ss_dssp CCCCSCBHHHHH
T ss_pred ecCCCCCHHHHH
Confidence 999999998876
No 172
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.29 E-value=1.6e-12 Score=123.85 Aligned_cols=89 Identities=22% Similarity=0.418 Sum_probs=77.5
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 482 (495)
++|...+.||+|+||.||+|+.+ ++.||||++..........+.|.+|++++.+++||||++++++|... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 45777899999999999999985 88899999986544333456799999999999999999999999876 6789999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 89 e~~~~~~L~~~l 100 (271)
T 3kmu_A 89 HWMPYGSLYNVL 100 (271)
T ss_dssp ECCTTCBHHHHH
T ss_pred cccCCCcHHHHH
Confidence 999999999886
No 173
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.29 E-value=5.8e-12 Score=124.97 Aligned_cols=90 Identities=17% Similarity=0.378 Sum_probs=78.1
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|.. .+|+.||||++...... ...+.+.+|++++.+++||||+++++++...+..++||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 46788889999999999999997 57999999999765432 22456899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 88 E~~~gg~L~~~l 99 (347)
T 3zgw_A 88 EYCPGGELFDYI 99 (347)
T ss_dssp ECCTTCBHHHHH
T ss_pred eCCCCCCHHHHH
Confidence 999999998875
No 174
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.28 E-value=8.1e-12 Score=124.67 Aligned_cols=91 Identities=23% Similarity=0.339 Sum_probs=79.0
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc----ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR----ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~----~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
.+.|...+.||+|+||.||+|... +|+.||||.+....... ...+.+.+|++++.+++|||||++++++...+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 356788899999999999999985 68999999997643211 1256799999999999999999999999999999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+++|+|.+++
T Consensus 91 ~lv~e~~~gg~L~~~l 106 (361)
T 2yab_A 91 VLILELVSGGELFDFL 106 (361)
T ss_dssp EEEEECCCSCBHHHHH
T ss_pred EEEEEcCCCCcHHHHH
Confidence 9999999999999886
No 175
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.28 E-value=3e-12 Score=131.91 Aligned_cols=93 Identities=22% Similarity=0.402 Sum_probs=80.5
Q ss_pred HHHHhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 399 DLLTATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 399 ~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
+++...++|...+.||+|+||.||+|.+.++..||||+++.... ..+.|.+|+++|.+++|||||+++++|. .+..
T Consensus 182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~ 257 (454)
T 1qcf_A 182 AWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPI 257 (454)
T ss_dssp CSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred ceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc---cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCcc
Confidence 34445677888999999999999999998888999999976432 3678999999999999999999999986 5678
Q ss_pred EEEEEecCCCCHhhhhC
Q 040888 479 ILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L~ 495 (495)
++|||||++|+|.++|+
T Consensus 258 ~lv~e~~~~g~L~~~l~ 274 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLK 274 (454)
T ss_dssp EEEECCCTTCBHHHHHH
T ss_pred EEEEeecCCCcHHHHHH
Confidence 99999999999999863
No 176
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.28 E-value=2.2e-12 Score=130.94 Aligned_cols=100 Identities=20% Similarity=0.318 Sum_probs=84.8
Q ss_pred ccHHHHHHhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEE
Q 040888 395 FSMADLLTATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFC 472 (495)
Q Consensus 395 ~~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~ 472 (495)
+.++++....++|...+.||+|+||+||+++.. +|+.||||++..... .....+.+.+|.+++.+++|||||++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345566667889999999999999999999984 699999999975322 112234588999999999999999999999
Q ss_pred EeCCEEEEEEEecCCCCHhhhh
Q 040888 473 SEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 473 ~~~~~~~lv~ey~~~GsL~~~L 494 (495)
.+.+..++|||||++|+|.+++
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l 152 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLL 152 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHH
T ss_pred eeCCEEEEEEcCCCCCcHHHHH
Confidence 9999999999999999999886
No 177
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.27 E-value=7.8e-12 Score=126.05 Aligned_cols=90 Identities=14% Similarity=0.247 Sum_probs=79.5
Q ss_pred cCCcccceeccC--CceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 405 ANFATGRLLGEG--TIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 405 ~~f~~~~~iG~G--~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
++|...+.||+| +||.||+|+.. +|+.||||++..........+.+.+|++++++++|||||++++++...+..++|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 467778999999 99999999985 699999999976544333456788999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
||||++|+|.+++
T Consensus 105 ~e~~~~~~L~~~l 117 (389)
T 3gni_B 105 TSFMAYGSAKDLI 117 (389)
T ss_dssp EECCTTCBHHHHH
T ss_pred EEccCCCCHHHHH
Confidence 9999999999876
No 178
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.27 E-value=6.4e-12 Score=124.93 Aligned_cols=90 Identities=20% Similarity=0.356 Sum_probs=77.1
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccc---cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ---RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
+.|...+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|++++.+++|||||++++++..++..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3577889999999999999987 46899999998643221 1135679999999999999999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 104 v~e~~~g~~L~~~l 117 (351)
T 3c0i_A 104 VFEFMDGADLCFEI 117 (351)
T ss_dssp EEECCSSCBHHHHH
T ss_pred EEeCCCCCCHHHHH
Confidence 99999999997764
No 179
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.27 E-value=5.9e-12 Score=124.57 Aligned_cols=94 Identities=20% Similarity=0.310 Sum_probs=80.5
Q ss_pred HHhccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccc---ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC
Q 040888 401 LTATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHF---QRANSESFSEIVQNISRIRHTNIAELVGFCSEQG 476 (495)
Q Consensus 401 ~~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (495)
....++|...+.||+|+||.||+|.. .++..||+|++..... .....+.+.+|++++.+++|||||+++++|...+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 44566788999999999999999997 4688999999865422 1233578999999999999999999999999999
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++||||+++|+|.+++
T Consensus 102 ~~~lv~e~~~gg~L~~~l 119 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKL 119 (345)
T ss_dssp EEEEEEECCCSCBHHHHE
T ss_pred eEEEEEeCCCCCcHHHHH
Confidence 999999999999999876
No 180
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.26 E-value=2.5e-12 Score=129.25 Aligned_cols=90 Identities=21% Similarity=0.462 Sum_probs=78.0
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|... +++.||||.+..... ....++|.+|++++.+++|||||+++++|...+..++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP-PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC-HHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 456778899999999999999985 689999999875421 222456899999999999999999999999888999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
|||++|+|.+++
T Consensus 192 e~~~~g~L~~~l 203 (377)
T 3cbl_A 192 ELVQGGDFLTFL 203 (377)
T ss_dssp ECCTTCBHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 999999999876
No 181
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.26 E-value=4.4e-12 Score=127.07 Aligned_cols=90 Identities=28% Similarity=0.517 Sum_probs=77.0
Q ss_pred ccCCcccceeccCCceEEEEEEc--------CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEe
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY--------PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSE 474 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~ 474 (495)
.++|...+.||+|+||.||+|+. .++..||||++..... ....+.+.+|++++.++ +|||||+++++|..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB-HHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC-HHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 35677889999999999999985 2356799999976532 22356799999999999 89999999999999
Q ss_pred CCEEEEEEEecCCCCHhhhh
Q 040888 475 QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 475 ~~~~~lv~ey~~~GsL~~~L 494 (495)
.+..++||||+++|+|.+++
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l 178 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYL 178 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHH
T ss_pred CCCEEEEEEcCCCCCHHHHH
Confidence 99999999999999999886
No 182
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.26 E-value=1.3e-11 Score=121.37 Aligned_cols=91 Identities=25% Similarity=0.379 Sum_probs=78.4
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc----ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR----ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~----~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
+.|...+.||+|+||.||+|... +|+.||||.+....... ...+.+.+|++++.+++|||||++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 35777899999999999999984 68999999997543211 13567999999999999999999999999999999
Q ss_pred EEEEecCCCCHhhhhC
Q 040888 480 LIYDYYRNGSLHEFLH 495 (495)
Q Consensus 480 lv~ey~~~GsL~~~L~ 495 (495)
+||||+++|+|.++++
T Consensus 91 lv~e~~~~~~L~~~l~ 106 (326)
T 2y0a_A 91 LILELVAGGELFDFLA 106 (326)
T ss_dssp EEEECCCSCBHHHHHT
T ss_pred EEEEcCCCCCHHHHHH
Confidence 9999999999998863
No 183
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.25 E-value=4.5e-12 Score=130.56 Aligned_cols=91 Identities=23% Similarity=0.442 Sum_probs=78.9
Q ss_pred HHhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 401 LTATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 401 ~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
+...++|...+.||+|+||.||+|.+.++..||||++..... ..++|.+|+++|.+++|||||+++++|.. +..++
T Consensus 180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~i 255 (452)
T 1fmk_A 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 255 (452)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEE
Confidence 344567888899999999999999998888899999976432 25689999999999999999999999876 66899
Q ss_pred EEEecCCCCHhhhhC
Q 040888 481 IYDYYRNGSLHEFLH 495 (495)
Q Consensus 481 v~ey~~~GsL~~~L~ 495 (495)
|||||++|+|.++|+
T Consensus 256 v~e~~~~gsL~~~l~ 270 (452)
T 1fmk_A 256 VTEYMSKGSLLDFLK 270 (452)
T ss_dssp EECCCTTCBHHHHHS
T ss_pred EehhhcCCCHHHHHH
Confidence 999999999999874
No 184
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.25 E-value=8.6e-12 Score=118.75 Aligned_cols=88 Identities=24% Similarity=0.439 Sum_probs=78.3
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.++|...+.||+|+||.||+|...++..||||++..... ..+++.+|++++.+++||||++++++|...+..++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC---cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 346777899999999999999998888999999976432 25679999999999999999999999999889999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 84 ~~~~~~L~~~l 94 (268)
T 3sxs_A 84 YISNGCLLNYL 94 (268)
T ss_dssp CCTTCBHHHHH
T ss_pred ccCCCcHHHHH
Confidence 99999999876
No 185
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.25 E-value=1.4e-11 Score=120.93 Aligned_cols=89 Identities=17% Similarity=0.237 Sum_probs=78.0
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++.+++||||+++++++...+..++||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 356788899999999999999985 58899999987542 23457889999999999999999999999999999999
Q ss_pred EecCCCCHhhhhC
Q 040888 483 DYYRNGSLHEFLH 495 (495)
Q Consensus 483 ey~~~GsL~~~L~ 495 (495)
||+++|+|.++++
T Consensus 81 e~~~g~~L~~~l~ 93 (321)
T 1tki_A 81 EFISGLDIFERIN 93 (321)
T ss_dssp CCCCCCBHHHHHT
T ss_pred EeCCCCCHHHHHH
Confidence 9999999998763
No 186
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.25 E-value=1.2e-11 Score=118.67 Aligned_cols=91 Identities=20% Similarity=0.366 Sum_probs=79.6
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 481 (495)
.++|...+.||+|+||.||+|... +++.||||++...........++.+|+..+.++ +||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 456888899999999999999985 699999999976533333456788999999999 999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 90 ~e~~~~~~L~~~l 102 (289)
T 1x8b_A 90 NEYCNGGSLADAI 102 (289)
T ss_dssp EECCTTCBHHHHH
T ss_pred EEecCCCcHHHHH
Confidence 9999999999876
No 187
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.25 E-value=1.1e-11 Score=122.51 Aligned_cols=90 Identities=20% Similarity=0.301 Sum_probs=78.3
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||+||+|... +|+.||+|+++.... .....+.+.+|++++.+++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 56888899999999999999984 699999999975422 1223567899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 85 E~~~gg~L~~~l 96 (337)
T 1o6l_A 85 EYANGGELFFHL 96 (337)
T ss_dssp ECCTTCBHHHHH
T ss_pred eCCCCCcHHHHH
Confidence 999999998875
No 188
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.25 E-value=9.6e-12 Score=119.42 Aligned_cols=88 Identities=25% Similarity=0.460 Sum_probs=75.8
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.++|...+.||+|+||.||+|...++..||||++..... ..+++.+|++++.+++||||++++++|...+..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 456777899999999999999998888999999976543 25679999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 100 ~~~~~~L~~~l 110 (283)
T 3gen_A 100 YMANGCLLNYL 110 (283)
T ss_dssp CCTTCBHHHHH
T ss_pred ccCCCcHHHHH
Confidence 99999999876
No 189
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.25 E-value=6.4e-12 Score=123.53 Aligned_cols=89 Identities=21% Similarity=0.408 Sum_probs=76.5
Q ss_pred cCCcccceeccCCceEEEEEEcC----CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP----DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
++|...+.||+|+||.||+|... .+..||||++..... ....+.|.+|++++.+++||||++++++|...+..++
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT-ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 45777899999999999999984 345699999976432 2235679999999999999999999999998888999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 128 v~e~~~~~~L~~~l 141 (325)
T 3kul_A 128 VTEYMENGSLDTFL 141 (325)
T ss_dssp EEECCTTCBHHHHH
T ss_pred EeeCCCCCcHHHHH
Confidence 99999999999886
No 190
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.25 E-value=7.4e-12 Score=122.99 Aligned_cols=89 Identities=22% Similarity=0.325 Sum_probs=75.5
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|... +++.||||++...... ...+.+.+|+.++.+++|||||++++++...+..++|||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 56888899999999999999975 6899999998654321 224568899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 86 ~~~~~~L~~~l 96 (323)
T 3tki_A 86 YCSGGELFDRI 96 (323)
T ss_dssp CCTTEEGGGGS
T ss_pred cCCCCcHHHHH
Confidence 99999998876
No 191
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.24 E-value=1.6e-11 Score=118.83 Aligned_cols=90 Identities=23% Similarity=0.338 Sum_probs=77.6
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|.. .+++.||+|++...... ....+.|.+|++.+.+++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 4577789999999999999997 46899999998654322 223467999999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 91 e~~~g~~L~~~l 102 (294)
T 4eqm_A 91 EYIEGPTLSEYI 102 (294)
T ss_dssp ECCCSCBHHHHH
T ss_pred eCCCCCCHHHHH
Confidence 999999999875
No 192
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.24 E-value=5.2e-12 Score=124.79 Aligned_cols=95 Identities=28% Similarity=0.480 Sum_probs=81.1
Q ss_pred HHHHhccCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEE
Q 040888 399 DLLTATANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFC 472 (495)
Q Consensus 399 ~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~ 472 (495)
.+....++|...+.||+|+||.||+|... +++.||||.+..... ....+.|.+|++++.+++||||++++++|
T Consensus 41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 119 (343)
T 1luf_A 41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDNPNIVKLLGVC 119 (343)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 33445678899999999999999999874 347899999976432 22356799999999999999999999999
Q ss_pred EeCCEEEEEEEecCCCCHhhhh
Q 040888 473 SEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 473 ~~~~~~~lv~ey~~~GsL~~~L 494 (495)
...+..++||||+++|+|.+++
T Consensus 120 ~~~~~~~lv~e~~~~~~L~~~l 141 (343)
T 1luf_A 120 AVGKPMCLLFEYMAYGDLNEFL 141 (343)
T ss_dssp CSSSSCEEEEECCTTCBHHHHH
T ss_pred ccCCceEEEEecCCCCcHHHHH
Confidence 9999999999999999999886
No 193
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.24 E-value=9.1e-12 Score=121.63 Aligned_cols=90 Identities=22% Similarity=0.420 Sum_probs=74.6
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.++|...+.||+|+||.||+|...+|+.||||++..........+.+.+|++++.+++|||||++++++..++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 35677889999999999999999889999999997654333335678999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++ +|.+++
T Consensus 100 ~~~~-~l~~~~ 109 (311)
T 3niz_A 100 FMEK-DLKKVL 109 (311)
T ss_dssp CCSE-EHHHHH
T ss_pred CCCC-CHHHHH
Confidence 9984 776654
No 194
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.24 E-value=3.9e-12 Score=126.62 Aligned_cols=100 Identities=21% Similarity=0.446 Sum_probs=82.9
Q ss_pred ccHHHHHHhccCCcccceeccCCceEEEEEEc------CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcce
Q 040888 395 FSMADLLTATANFATGRLLGEGTIGRVYRAKY------PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAE 467 (495)
Q Consensus 395 ~~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~ 467 (495)
+...++....++|...+.||+|+||.||+|.+ .+++.||||++..... ....+.|.+|++++.++ +|||||+
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC-HHHHHHHHHHHHHHHhhcCCcceee
Confidence 44566667788899999999999999999973 3467999999976432 22346799999999999 8999999
Q ss_pred EEEEEEeCC-EEEEEEEecCCCCHhhhhC
Q 040888 468 LVGFCSEQG-HNILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 468 l~g~~~~~~-~~~lv~ey~~~GsL~~~L~ 495 (495)
++++|...+ ..++||||+++|+|.++++
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~ 119 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLR 119 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHH
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHH
Confidence 999998755 4889999999999998863
No 195
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.24 E-value=1.6e-11 Score=117.83 Aligned_cols=91 Identities=22% Similarity=0.359 Sum_probs=79.1
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|... +++.||+|++..........+.+.+|++++.+++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 357888899999999999999974 5899999999765443333567889999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 85 e~~~~~~l~~~~ 96 (284)
T 3kk8_A 85 DLVTGGELFEDI 96 (284)
T ss_dssp CCCCSCBHHHHH
T ss_pred ecCCCCCHHHHH
Confidence 999999997764
No 196
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.23 E-value=5.2e-12 Score=131.54 Aligned_cols=89 Identities=24% Similarity=0.506 Sum_probs=78.9
Q ss_pred hccCCcccceeccCCceEEEEEEcCC-CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
...+|...+.||+|+||.||+|.+.. +..||||.+..... ..++|.+|+++|.+++|||||+++++|...+..++|
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 294 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc---chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence 34567788999999999999999864 88999999976432 357899999999999999999999999998899999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
||||++|+|.++|
T Consensus 295 ~E~~~~g~L~~~l 307 (495)
T 1opk_A 295 TEFMTYGNLLDYL 307 (495)
T ss_dssp EECCTTCBHHHHH
T ss_pred EEccCCCCHHHHH
Confidence 9999999999886
No 197
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.23 E-value=8.4e-12 Score=128.00 Aligned_cols=91 Identities=25% Similarity=0.368 Sum_probs=77.6
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|.. .+|+.+|+|++..........+.+.+|++++++++|||||++++++..++..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 45688889999999999999987 46899999999765443333567899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 90 E~~~gg~L~~~i 101 (444)
T 3soa_A 90 DLVTGGELFEDI 101 (444)
T ss_dssp CCCBCCBHHHHH
T ss_pred EeCCCCCHHHHH
Confidence 999999998765
No 198
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.23 E-value=2e-11 Score=119.43 Aligned_cols=89 Identities=24% Similarity=0.441 Sum_probs=76.1
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC--EEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG--HNILI 481 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv 481 (495)
+.|...+.||+|+||.||+|... +++.||||++...... ...+.+.+|++++.+++||||+++++++...+ ..++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 35677899999999999999985 5899999999754332 23567889999999999999999999998765 67999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 88 ~e~~~~~~L~~~l 100 (319)
T 4euu_A 88 MEFCPCGSLYTVL 100 (319)
T ss_dssp EECCTTCBHHHHH
T ss_pred EeCCCCCCHHHHH
Confidence 9999999999876
No 199
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.23 E-value=1.3e-11 Score=126.92 Aligned_cols=87 Identities=25% Similarity=0.491 Sum_probs=76.5
Q ss_pred hccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC-EEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG-HNILI 481 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv 481 (495)
..++|...+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|+++|.+++|||||+++++|...+ ..++|
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 3456778899999999999999985 7799999997643 2568999999999999999999999998765 78999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
||||++|+|.+++
T Consensus 266 ~e~~~~g~L~~~l 278 (450)
T 1k9a_A 266 TEYMAKGSLVDYL 278 (450)
T ss_dssp EECCTTCBHHHHH
T ss_pred EEecCCCcHHHHH
Confidence 9999999999886
No 200
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.23 E-value=6e-12 Score=132.35 Aligned_cols=92 Identities=23% Similarity=0.435 Sum_probs=79.3
Q ss_pred HHHhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 400 LLTATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 400 ~~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
++...++|...+.||+|+||.||+|.+.++..||||++..... ..++|.+|+++|.+++|||||+++++|.. +..+
T Consensus 262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~ 337 (535)
T 2h8h_A 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 337 (535)
T ss_dssp SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccce
Confidence 3344567788899999999999999998888899999976532 25689999999999999999999999876 6689
Q ss_pred EEEEecCCCCHhhhhC
Q 040888 480 LIYDYYRNGSLHEFLH 495 (495)
Q Consensus 480 lv~ey~~~GsL~~~L~ 495 (495)
+|||||++|+|.++|+
T Consensus 338 lv~e~~~~gsL~~~l~ 353 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLK 353 (535)
T ss_dssp EEECCCTTEEHHHHHS
T ss_pred EeeehhcCCcHHHHHh
Confidence 9999999999999874
No 201
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.23 E-value=1.9e-11 Score=117.63 Aligned_cols=89 Identities=19% Similarity=0.300 Sum_probs=77.8
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+.|...+.||+|+||.||+|.. .++..||+|++..... ....+.+.+|++++.+++||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 3577789999999999999997 4688999999976542 2235789999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 101 ~~~~~~L~~~l 111 (285)
T 3is5_A 101 TCEGGELLERI 111 (285)
T ss_dssp CCSCCBHHHHH
T ss_pred eCCCCcHHHHH
Confidence 99999998875
No 202
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.23 E-value=1.3e-11 Score=123.73 Aligned_cols=85 Identities=21% Similarity=0.421 Sum_probs=69.4
Q ss_pred cccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecC
Q 040888 408 ATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 408 ~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
...+.||+|+||.||+|.. .+|+.||+|++..... ...+.|.+|++++.+++|||||+++++|...+..++||||++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM--KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc--ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 3357899999999999987 4699999999976432 235689999999999999999999999999999999999999
Q ss_pred CCCHhhhh
Q 040888 487 NGSLHEFL 494 (495)
Q Consensus 487 ~GsL~~~L 494 (495)
+|+|.+++
T Consensus 170 ~~~L~~~l 177 (373)
T 2x4f_A 170 GGELFDRI 177 (373)
T ss_dssp TCEEHHHH
T ss_pred CCcHHHHH
Confidence 99998765
No 203
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.22 E-value=1.6e-11 Score=119.50 Aligned_cols=90 Identities=20% Similarity=0.389 Sum_probs=77.6
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|... +|+.||||++..........+.+.+|++++.+++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 46778899999999999999985 59999999987654333335678899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 83 ~~~~~~l~~~~ 93 (311)
T 4agu_A 83 YCDHTVLHELD 93 (311)
T ss_dssp CCSEEHHHHHH
T ss_pred eCCCchHHHHH
Confidence 99999887764
No 204
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.22 E-value=2.2e-11 Score=121.58 Aligned_cols=88 Identities=22% Similarity=0.303 Sum_probs=77.7
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||++... +++.||||++..... ..+.+.+|+.++++++|||||++++++...+..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 346778899999999999999985 689999999975432 2467889999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 96 e~~~~~~L~~~l 107 (361)
T 3uc3_A 96 EYASGGELYERI 107 (361)
T ss_dssp ECCCSCBHHHHH
T ss_pred EeCCCCCHHHHH
Confidence 999999998875
No 205
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.22 E-value=1.5e-11 Score=122.16 Aligned_cols=88 Identities=22% Similarity=0.309 Sum_probs=71.7
Q ss_pred hccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
..+.|...+.||+|+||.||+|... +++.||||++.... ..+.+.+|++++.+++||||++++++|...+..++|
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 3467888899999999999999985 58899999997542 245688999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 127 ~e~~~~~~L~~~l 139 (349)
T 2w4o_A 127 LELVTGGELFDRI 139 (349)
T ss_dssp ECCCCSCBHHHHH
T ss_pred EEeCCCCCHHHHH
Confidence 9999999998876
No 206
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.22 E-value=2.1e-11 Score=116.72 Aligned_cols=91 Identities=20% Similarity=0.395 Sum_probs=77.8
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe--CCEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE--QGHNIL 480 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~--~~~~~l 480 (495)
.++|...+.||+|+||.||+|... +++.||+|.+..........+.+.+|++++.+++||||+++++++.. .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 356778899999999999999984 68999999997654333345679999999999999999999999865 567899
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 85 v~e~~~~~~L~~~l 98 (279)
T 2w5a_A 85 VMEYCEGGDLASVI 98 (279)
T ss_dssp EEECCTTEEHHHHH
T ss_pred EEeCCCCCCHHHHH
Confidence 99999999999876
No 207
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.22 E-value=1.5e-11 Score=118.52 Aligned_cols=89 Identities=22% Similarity=0.392 Sum_probs=76.9
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
++|...+.||+|+||.||+|...+|+.||||++..........+.+.+|++++.+++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 45777899999999999999998899999999976543333357789999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++ +|.+++
T Consensus 82 ~~~-~l~~~~ 90 (288)
T 1ob3_A 82 LDQ-DLKKLL 90 (288)
T ss_dssp CSE-EHHHHH
T ss_pred cCC-CHHHHH
Confidence 985 887764
No 208
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.22 E-value=1.6e-11 Score=120.33 Aligned_cols=90 Identities=24% Similarity=0.366 Sum_probs=78.2
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|+.. +|+.||+|++...... ....+.+.+|+.++..++|||||++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56788899999999999999984 6999999999754321 123567889999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 86 e~~~gg~L~~~l 97 (318)
T 1fot_A 86 DYIEGGELFSLL 97 (318)
T ss_dssp CCCCSCBHHHHH
T ss_pred eCCCCCCHHHHH
Confidence 999999999876
No 209
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.21 E-value=2.6e-11 Score=122.16 Aligned_cols=90 Identities=18% Similarity=0.303 Sum_probs=78.6
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.+.|...+.||+|+||.||+|... +|+.||+|.+..... .....+.+|++++.+++|||||++++++...+..++||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch--hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 457888999999999999999984 689999999875432 22457899999999999999999999999999999999
Q ss_pred EecCCCCHhhhhC
Q 040888 483 DYYRNGSLHEFLH 495 (495)
Q Consensus 483 ey~~~GsL~~~L~ 495 (495)
||+++|+|.++++
T Consensus 128 E~~~gg~L~~~l~ 140 (387)
T 1kob_A 128 EFLSGGELFDRIA 140 (387)
T ss_dssp ECCCCCBHHHHTT
T ss_pred EcCCCCcHHHHHH
Confidence 9999999998763
No 210
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.21 E-value=2.1e-11 Score=126.99 Aligned_cols=90 Identities=21% Similarity=0.358 Sum_probs=73.8
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+.|...+.||+|+||.||+|... ++..||||++..........+.+.+|++++++++|||||+++++|...+..++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 45778899999999999999985 68899999997654333345789999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 117 ~~~~g~L~~~~ 127 (494)
T 3lij_A 117 CYKGGELFDEI 127 (494)
T ss_dssp CCCSCBHHHHH
T ss_pred cCCCCcHHHHH
Confidence 99999998765
No 211
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.21 E-value=1.5e-11 Score=121.04 Aligned_cols=90 Identities=23% Similarity=0.404 Sum_probs=71.8
Q ss_pred cCCcccceeccCCceEEEEEEc----CCCCEEEEEEecCcccc--cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY----PDGKVLAVKKIDSSHFQ--RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
++|...+.||+|+||.||++.. .+++.||+|++...... ......+.+|++++.+++|||||++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 4678889999999999999987 46899999999765321 12245688999999999999999999999999999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+++|+|.+++
T Consensus 97 ~lv~e~~~~~~L~~~l 112 (327)
T 3a62_A 97 YLILEYLSGGELFMQL 112 (327)
T ss_dssp EEEEECCTTEEHHHHH
T ss_pred EEEEeCCCCCcHHHHH
Confidence 9999999999998875
No 212
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.21 E-value=1.4e-11 Score=117.06 Aligned_cols=87 Identities=23% Similarity=0.463 Sum_probs=77.9
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
++|...+.||+|+||.||+|...+++.||+|.+..... ..+.+.+|++++.+++||||+++++++..++..++||||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 45677899999999999999998888999999976532 246899999999999999999999999998899999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 85 ~~~~~L~~~~ 94 (267)
T 3t9t_A 85 MEHGCLSDYL 94 (267)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999999876
No 213
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.21 E-value=8.8e-12 Score=124.74 Aligned_cols=90 Identities=24% Similarity=0.362 Sum_probs=76.8
Q ss_pred ccCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH 477 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (495)
.++|...+.||+|+||.||+|++. ++..||||++..... ......|.+|+.++.+++|||||++++++...+.
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 356778899999999999999953 466899999975432 2235679999999999999999999999999888
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+++|+|.+++
T Consensus 149 ~~lv~e~~~~g~L~~~l 165 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFL 165 (367)
T ss_dssp CEEEEECCTTEEHHHHH
T ss_pred CEEEEEeCCCCCHHHHH
Confidence 99999999999999876
No 214
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.21 E-value=1.3e-11 Score=124.04 Aligned_cols=90 Identities=19% Similarity=0.305 Sum_probs=78.1
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||++... +++.||+|.+..... .....+.+.+|++++.+++|||||+++++|...+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46778899999999999999974 588999999975432 1223567899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 95 e~~~gg~L~~~l 106 (384)
T 4fr4_A 95 DLLLGGDLRYHL 106 (384)
T ss_dssp CCCTTEEHHHHH
T ss_pred ecCCCCcHHHHH
Confidence 999999998876
No 215
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.20 E-value=1.4e-11 Score=120.78 Aligned_cols=87 Identities=23% Similarity=0.296 Sum_probs=73.4
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC----EEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG----HNI 479 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----~~~ 479 (495)
.++|...+.||+|+||.||+|+.. ++.||||++..... ....+.+|+.++.+++|||||++++++.... ..+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK---QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch---HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 356778899999999999999885 78999999965432 2345677999999999999999999998744 468
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||+++|+|.+++
T Consensus 99 lv~e~~~~g~L~~~l 113 (322)
T 3soc_A 99 LITAFHEKGSLSDFL 113 (322)
T ss_dssp EEEECCTTCBHHHHH
T ss_pred EEEecCCCCCHHHHH
Confidence 999999999999886
No 216
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.20 E-value=2.8e-11 Score=118.41 Aligned_cols=89 Identities=18% Similarity=0.381 Sum_probs=63.8
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|... +|+.||||++..... ....+.+.+|++++.+++|||||++++++..++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 456888899999999999999984 589999999975432 223467899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||++ |+|.+++
T Consensus 83 e~~~-~~L~~~l 93 (317)
T 2pmi_A 83 EFMD-NDLKKYM 93 (317)
T ss_dssp ECCC-CBHHHHH
T ss_pred EecC-CCHHHHH
Confidence 9998 6888765
No 217
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.20 E-value=1.1e-11 Score=121.43 Aligned_cols=94 Identities=28% Similarity=0.517 Sum_probs=70.6
Q ss_pred HHhccCCcccceeccCCceEEEEEEcCC-C---CEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC
Q 040888 401 LTATANFATGRLLGEGTIGRVYRAKYPD-G---KVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG 476 (495)
Q Consensus 401 ~~~t~~f~~~~~iG~G~~g~Vy~~~~~~-g---~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (495)
....++|...+.||+|+||.||+|.... + ..||||.+..........+.|.+|++++.+++||||+++++++...+
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 3445678889999999999999999854 3 27999999765433334678999999999999999999999998876
Q ss_pred EE------EEEEEecCCCCHhhhh
Q 040888 477 HN------ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~------~lv~ey~~~GsL~~~L 494 (495)
.. ++|+||+++|+|.+++
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l 122 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFL 122 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHH
T ss_pred cccCCCccEEEEEeccCCcHHHHH
Confidence 55 8999999999999876
No 218
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.20 E-value=2.7e-11 Score=120.34 Aligned_cols=90 Identities=19% Similarity=0.279 Sum_probs=78.5
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+.+|++++.+++||||+++++++...+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 56888899999999999999985 6999999999754321 123567899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 121 e~~~gg~L~~~l 132 (350)
T 1rdq_E 121 EYVAGGEMFSHL 132 (350)
T ss_dssp ECCTTCBHHHHH
T ss_pred cCCCCCcHHHHH
Confidence 999999999876
No 219
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.20 E-value=4e-11 Score=125.18 Aligned_cols=91 Identities=24% Similarity=0.376 Sum_probs=75.3
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-----------ccHHHHHHHHHHHhcCCCCCcceEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-----------ANSESFSEIVQNISRIRHTNIAELVGF 471 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-----------~~~~~f~~e~~~l~~l~H~niv~l~g~ 471 (495)
.+.|...+.||+|+||.||+|... +++.||||++....... ...+.+.+|++++.+++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467888999999999999999984 58899999997543211 234678999999999999999999999
Q ss_pred EEeCCEEEEEEEecCCCCHhhhh
Q 040888 472 CSEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 472 ~~~~~~~~lv~ey~~~GsL~~~L 494 (495)
|...+..++||||+++|+|.+++
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l 137 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQI 137 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHH
T ss_pred EEcCCEEEEEEecCCCCcHHHHH
Confidence 99999999999999999998765
No 220
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.20 E-value=3.8e-11 Score=115.15 Aligned_cols=90 Identities=27% Similarity=0.436 Sum_probs=77.9
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc----ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR----ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~----~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
++|...+.||+|+||.||+|... +++.||||.+....... ...+.|.+|++++.+++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 35777899999999999999985 68999999987543211 13578999999999999999999999999999999
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||+++|+|.+++
T Consensus 85 lv~e~~~~~~L~~~l 99 (283)
T 3bhy_A 85 LILELVSGGELFDFL 99 (283)
T ss_dssp EEEECCCSCBHHHHH
T ss_pred EEEeecCCCcHHHHH
Confidence 999999999999876
No 221
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.20 E-value=3.4e-11 Score=115.18 Aligned_cols=88 Identities=20% Similarity=0.287 Sum_probs=77.2
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+.|...+.||+|+||.||+|... ++..||+|++..... ...+.+.+|++++.+++||||++++++|...+..++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 45777899999999999999985 478999999976432 235789999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 87 ~~~~~~L~~~~ 97 (277)
T 3f3z_A 87 LCTGGELFERV 97 (277)
T ss_dssp CCCSCBHHHHH
T ss_pred ccCCCcHHHHH
Confidence 99999998765
No 222
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.19 E-value=1.6e-11 Score=117.64 Aligned_cols=88 Identities=23% Similarity=0.433 Sum_probs=76.4
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.++|...+.||+|+||.||+|...++..||||.+..... ..+.|.+|++++.+++||||+++++++.. +..++|||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEe
Confidence 456788899999999999999998888999999976432 25689999999999999999999999864 55789999
Q ss_pred ecCCCCHhhhhC
Q 040888 484 YYRNGSLHEFLH 495 (495)
Q Consensus 484 y~~~GsL~~~L~ 495 (495)
|+++|+|.++++
T Consensus 88 ~~~~~~L~~~l~ 99 (279)
T 1qpc_A 88 YMENGSLVDFLK 99 (279)
T ss_dssp CCTTCBHHHHTT
T ss_pred cCCCCCHHHHHh
Confidence 999999998863
No 223
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.19 E-value=3.2e-11 Score=119.59 Aligned_cols=90 Identities=13% Similarity=0.275 Sum_probs=77.2
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 481 (495)
++|...+.||+|+||.||+|+.. +++.||+|++....... ...+.+.+|..++.++ +|||||++++++...+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46778899999999999999985 58899999997653322 2345688999999987 899999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 89 ~e~~~gg~L~~~l 101 (345)
T 3a8x_A 89 IEYVNGGDLMFHM 101 (345)
T ss_dssp ECCCCSCBHHHHH
T ss_pred EeCCCCCcHHHHH
Confidence 9999999998875
No 224
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.19 E-value=2.8e-11 Score=122.40 Aligned_cols=90 Identities=23% Similarity=0.438 Sum_probs=76.6
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC--EEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG--HNILI 481 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv 481 (495)
+.|...+.||+|+||.||+|... +|+.||||++...... ...+.+.+|++++.+++|||||++++++...+ ..++|
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 35677899999999999999985 5899999999754332 23567889999999999999999999998765 67999
Q ss_pred EEecCCCCHhhhhC
Q 040888 482 YDYYRNGSLHEFLH 495 (495)
Q Consensus 482 ~ey~~~GsL~~~L~ 495 (495)
|||+++|+|.++++
T Consensus 88 ~e~~~~g~L~~~l~ 101 (396)
T 4eut_A 88 MEFCPCGSLYTVLE 101 (396)
T ss_dssp ECCCTTEEHHHHTT
T ss_pred EecCCCCCHHHHHH
Confidence 99999999998864
No 225
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.19 E-value=3.8e-11 Score=115.87 Aligned_cols=88 Identities=19% Similarity=0.377 Sum_probs=75.0
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|... +++.||||++..........+.+.+|++++.+++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46778899999999999999984 68999999997654433345778999999999999999999999999999999999
Q ss_pred ecCCCCHhhh
Q 040888 484 YYRNGSLHEF 493 (495)
Q Consensus 484 y~~~GsL~~~ 493 (495)
|+++ ++.++
T Consensus 82 ~~~~-~l~~~ 90 (292)
T 3o0g_A 82 FCDQ-DLKKY 90 (292)
T ss_dssp CCSE-EHHHH
T ss_pred cCCC-CHHHH
Confidence 9985 55443
No 226
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.19 E-value=2.4e-11 Score=117.69 Aligned_cols=91 Identities=19% Similarity=0.345 Sum_probs=71.6
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc------------------------ccHHHHHHHHHHHh
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR------------------------ANSESFSEIVQNIS 458 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~------------------------~~~~~f~~e~~~l~ 458 (495)
.++|...+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|++++.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 35678889999999999999987 468899999986543211 11346899999999
Q ss_pred cCCCCCcceEEEEEEe--CCEEEEEEEecCCCCHhhhh
Q 040888 459 RIRHTNIAELVGFCSE--QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 459 ~l~H~niv~l~g~~~~--~~~~~lv~ey~~~GsL~~~L 494 (495)
+++||||+++++++.. .+..++||||+++|+|.+++
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 129 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP 129 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh
Confidence 9999999999999987 56789999999999987653
No 227
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.19 E-value=2.4e-11 Score=120.88 Aligned_cols=91 Identities=22% Similarity=0.336 Sum_probs=77.7
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 480 (495)
.++|...+.||+|+||.||+|+.. +|+.||||++..... .....+.+.+|.+++..+ +|||||++++++...+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 467888999999999999999974 589999999976422 122356688999999988 79999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 102 v~E~~~gg~L~~~l 115 (353)
T 3txo_A 102 VMEFVNGGDLMFHI 115 (353)
T ss_dssp EEECCCSCBHHHHH
T ss_pred EEeCCCCCcHHHHH
Confidence 99999999998876
No 228
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.19 E-value=2.4e-11 Score=126.31 Aligned_cols=90 Identities=20% Similarity=0.378 Sum_probs=78.8
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+.|...+.||+|+||.||+|... +++.||||++..........+.+.+|++++.+++|||||++++++...+..++|+|
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 45778899999999999999984 68999999997543333346789999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 102 ~~~~~~L~~~~ 112 (486)
T 3mwu_A 102 LYTGGELFDEI 112 (486)
T ss_dssp CCCSCBHHHHH
T ss_pred cCCCCcHHHHH
Confidence 99999998765
No 229
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.19 E-value=2.4e-11 Score=121.00 Aligned_cols=89 Identities=22% Similarity=0.254 Sum_probs=78.3
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|... ++..||+|++..... ....+.+.+|++++.+++||||+++++++..++..++|||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCC-HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccC-HHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 46778899999999999999985 689999999976422 2235679999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 112 ~~~~~~L~~~l 122 (360)
T 3eqc_A 112 HMDGGSLDQVL 122 (360)
T ss_dssp CCTTCBHHHHH
T ss_pred CCCCCCHHHHH
Confidence 99999999876
No 230
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.19 E-value=7.3e-12 Score=122.65 Aligned_cols=96 Identities=19% Similarity=0.348 Sum_probs=81.0
Q ss_pred HHHHHhccCCcccceeccCCceEEEEEEcC------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEE
Q 040888 398 ADLLTATANFATGRLLGEGTIGRVYRAKYP------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGF 471 (495)
Q Consensus 398 ~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~ 471 (495)
+++....++|...+.||+|+||.||+|+.. .++.||||.+..... ......|.+|++++.+++||||++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC-HHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC-HHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence 344555678888999999999999999864 367899999975432 1234579999999999999999999999
Q ss_pred EEeCCEEEEEEEecCCCCHhhhh
Q 040888 472 CSEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 472 ~~~~~~~~lv~ey~~~GsL~~~L 494 (495)
+...+..++||||+++|+|.+++
T Consensus 97 ~~~~~~~~lv~e~~~~~~L~~~l 119 (322)
T 1p4o_A 97 VSQGQPTLVIMELMTRGDLKSYL 119 (322)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHH
T ss_pred EccCCccEEEEEeCCCCcHHHHH
Confidence 99988999999999999999886
No 231
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.19 E-value=5.9e-11 Score=115.53 Aligned_cols=91 Identities=21% Similarity=0.362 Sum_probs=76.7
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.++|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|++++.+++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 34688889999999999999997 5789999999975322 122356789999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 111 ~e~~~~~~L~~~l 123 (310)
T 2wqm_A 111 LELADAGDLSRMI 123 (310)
T ss_dssp EECCCSCBHHHHH
T ss_pred EecCCCCCHHHHH
Confidence 9999999998875
No 232
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.19 E-value=1.8e-11 Score=117.79 Aligned_cols=88 Identities=27% Similarity=0.508 Sum_probs=76.0
Q ss_pred cCCcccceeccCCceEEEEEEcCC-C-------CEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD-G-------KVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG 476 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~-g-------~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (495)
++|...+.||+|+||.||+|.... + ..||+|.+..... ...+.|.+|++++.+++||||++++++|..++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR--NYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG--GGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 457778999999999999998743 3 4799999965432 33578999999999999999999999999999
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++||||+++|+|.+++
T Consensus 86 ~~~lv~e~~~~~~L~~~l 103 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYL 103 (289)
T ss_dssp CCEEEEECCTTCBHHHHH
T ss_pred CCEEEEECCCCCCHHHHH
Confidence 999999999999999886
No 233
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.19 E-value=8.5e-11 Score=114.66 Aligned_cols=87 Identities=24% Similarity=0.323 Sum_probs=74.6
Q ss_pred CCcc-cceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhc-CCCCCcceEEEEEEeCCEEEEEE
Q 040888 406 NFAT-GRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISR-IRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 406 ~f~~-~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.|.. .+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++.+ .+||||+++++++...+..++||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG--HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS--CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc--hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4554 47899999999999997 4689999999975432 235689999999998 47999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 91 e~~~~~~L~~~l 102 (316)
T 2ac3_A 91 EKMRGGSILSHI 102 (316)
T ss_dssp ECCTTCBHHHHH
T ss_pred EcCCCCcHHHHH
Confidence 999999999876
No 234
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.19 E-value=1.6e-11 Score=119.61 Aligned_cols=90 Identities=29% Similarity=0.513 Sum_probs=77.2
Q ss_pred ccCCcccceeccCCceEEEEEEc------CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY------PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH 477 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (495)
.++|...+.||+|+||.||+|.. .++..||||.+..... ....+.+.+|++++.+++||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS-PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 45677789999999999999986 2457899999975432 2235679999999999999999999999999999
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+++|+|.+++
T Consensus 101 ~~lv~e~~~~~~L~~~l 117 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFL 117 (314)
T ss_dssp CEEEEECCTTCBHHHHH
T ss_pred eEEEEeecCCCCHHHHH
Confidence 99999999999999886
No 235
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.18 E-value=5.3e-11 Score=114.70 Aligned_cols=88 Identities=16% Similarity=0.320 Sum_probs=74.4
Q ss_pred CcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe----CCEEEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE----QGHNILI 481 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv 481 (495)
|...+.||+|+||.||+|.. .++..||+|.+..........+.+.+|++++.+++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 45567899999999999987 458899999997654433345779999999999999999999999876 3557899
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 108 ~e~~~~~~L~~~l 120 (290)
T 1t4h_A 108 TELMTSGTLKTYL 120 (290)
T ss_dssp EECCCSCBHHHHH
T ss_pred EEecCCCCHHHHH
Confidence 9999999999876
No 236
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.18 E-value=2.5e-11 Score=116.28 Aligned_cols=91 Identities=29% Similarity=0.447 Sum_probs=78.0
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.++|...+.||+|+||.||+|... ++..||||++...... ....+.+.+|++++.+++||||++++++|...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467888899999999999999874 5789999998654321 12356789999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 88 ~e~~~~~~l~~~l 100 (279)
T 3fdn_A 88 LEYAPLGTVYREL 100 (279)
T ss_dssp ECCCTTEEHHHHH
T ss_pred EecCCCCcHHHHH
Confidence 9999999998775
No 237
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.18 E-value=4e-11 Score=117.51 Aligned_cols=90 Identities=22% Similarity=0.349 Sum_probs=78.0
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc----ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR----ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~----~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
+.|...+.||+|+||.||+|... +|+.||||.+....... ...+.+.+|++++.+++||||+++++++...+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 45777899999999999999985 68999999997543211 13567999999999999999999999999999999
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||+++|+|.+++
T Consensus 92 lv~e~~~~~~L~~~l 106 (321)
T 2a2a_A 92 LILELVSGGELFDFL 106 (321)
T ss_dssp EEECCCCSCBHHHHH
T ss_pred EEEEcCCCCcHHHHH
Confidence 999999999999876
No 238
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.18 E-value=1.8e-11 Score=119.46 Aligned_cols=89 Identities=22% Similarity=0.275 Sum_probs=72.6
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|+..+.||+|+||+||+|... +|+.||||++............+..|+..+.++ +|||||+++++|...+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 46888899999999999999985 699999999865433222344566666666655 9999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+ +|+|.+++
T Consensus 137 e~~-~~~L~~~~ 147 (311)
T 3p1a_A 137 ELC-GPSLQQHC 147 (311)
T ss_dssp ECC-CCBHHHHH
T ss_pred ecc-CCCHHHHH
Confidence 999 67888764
No 239
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.18 E-value=2.8e-11 Score=125.11 Aligned_cols=91 Identities=24% Similarity=0.438 Sum_probs=78.8
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|+.. +|+.||||++....... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56778899999999999999985 69999999997543211 23467899999999999999999999999999999999
Q ss_pred EecCCCCHhhhhC
Q 040888 483 DYYRNGSLHEFLH 495 (495)
Q Consensus 483 ey~~~GsL~~~L~ 495 (495)
||+++|+|.+++.
T Consensus 96 E~~~gg~L~~~l~ 108 (476)
T 2y94_A 96 EYVSGGELFDYIC 108 (476)
T ss_dssp ECCSSEEHHHHTT
T ss_pred eCCCCCcHHHHHH
Confidence 9999999998863
No 240
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.18 E-value=7e-11 Score=113.95 Aligned_cols=87 Identities=26% Similarity=0.396 Sum_probs=74.5
Q ss_pred CCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
+|....+||+|+||.||+|.. .+++.||||.+..... ...+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS--RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-----HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch--HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 345567899999999999997 5688999999875432 2356799999999999999999999999999999999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 101 ~~~~~L~~~l 110 (295)
T 2clq_A 101 VPGGSLSALL 110 (295)
T ss_dssp CSEEEHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999998875
No 241
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.18 E-value=3.1e-11 Score=119.64 Aligned_cols=92 Identities=16% Similarity=0.345 Sum_probs=78.1
Q ss_pred hccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 479 (495)
..++|...+.||+|+||.||+|+.. +|+.||||+++.... .....+.+..|.+++..+ +||||+++++++...+..+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4568888999999999999999985 589999999976432 112346688899999876 9999999999999999999
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||+++|+|.+++
T Consensus 95 lv~E~~~gg~L~~~l 109 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHI 109 (345)
T ss_dssp EEEECCTTCBHHHHH
T ss_pred EEEeCCCCCcHHHHH
Confidence 999999999999876
No 242
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.18 E-value=4.1e-11 Score=114.37 Aligned_cols=89 Identities=22% Similarity=0.325 Sum_probs=78.0
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|... +++.||||.+...... ...+.+.+|++++.+++||||+++++++...+..++|+|
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT-THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch-hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 46778899999999999999985 6899999998754322 235779999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 86 ~~~~~~L~~~l 96 (276)
T 2yex_A 86 YCSGGELFDRI 96 (276)
T ss_dssp CCTTEEGGGGS
T ss_pred ecCCCcHHHHH
Confidence 99999998876
No 243
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.18 E-value=2.7e-11 Score=119.22 Aligned_cols=91 Identities=25% Similarity=0.399 Sum_probs=74.7
Q ss_pred hccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
..++|...+.||+|+||.||+|.. .+++.||||++..........+.+.+|++++.+++|||||++++++..++..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 356788899999999999999986 4689999999976543333356788999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||++ |+|.+++
T Consensus 112 ~e~~~-~~L~~~~ 123 (329)
T 3gbz_A 112 FEYAE-NDLKKYM 123 (329)
T ss_dssp EECCS-EEHHHHH
T ss_pred EecCC-CCHHHHH
Confidence 99998 5888775
No 244
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.17 E-value=1.1e-11 Score=119.38 Aligned_cols=89 Identities=24% Similarity=0.486 Sum_probs=78.4
Q ss_pred hccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
..++|...+.||+|+||.||+|... ++..||+|.+.... ...+.|.+|++++.+++||||+++++++...+..++|
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 4567888899999999999999985 48899999997543 2357899999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 88 ~e~~~~~~L~~~~ 100 (288)
T 3kfa_A 88 TEFMTYGNLLDYL 100 (288)
T ss_dssp EECCTTEEHHHHH
T ss_pred EEcCCCCcHHHHH
Confidence 9999999999876
No 245
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.17 E-value=2.5e-11 Score=115.64 Aligned_cols=89 Identities=27% Similarity=0.477 Sum_probs=72.1
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccc--cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQ--RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|... ++.||||++...... ....+.+.+|++++.+++||||++++++|...+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 46777899999999999999984 889999998754321 123467999999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 86 e~~~~~~L~~~~ 97 (271)
T 3dtc_A 86 EFARGGPLNRVL 97 (271)
T ss_dssp ECCTTEEHHHHH
T ss_pred EcCCCCCHHHHh
Confidence 999999998876
No 246
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.17 E-value=5.7e-11 Score=114.98 Aligned_cols=84 Identities=27% Similarity=0.479 Sum_probs=70.5
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhc--CCCCCcceEEEEEEeCC----EE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISR--IRHTNIAELVGFCSEQG----HN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~--l~H~niv~l~g~~~~~~----~~ 478 (495)
++|...+.||+|+||.||+|+.. ++.||||++... ..+.+.+|.+++.. ++||||+++++++.... ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 46788899999999999999874 889999998643 24567888888887 79999999999998876 78
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+++|+|.+++
T Consensus 77 ~lv~e~~~~g~L~~~l 92 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYL 92 (303)
T ss_dssp EEEEECCTTCCHHHHH
T ss_pred EEEEeccCCCCHHHHH
Confidence 9999999999999886
No 247
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.17 E-value=4.7e-11 Score=114.90 Aligned_cols=91 Identities=20% Similarity=0.376 Sum_probs=79.7
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|+.. +++.||||++..........+.+.+|++++.+++||||+++++++...+..++|+
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 356888899999999999999985 6899999999765433334678999999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 101 e~~~~~~L~~~l 112 (287)
T 2wei_A 101 ELYTGGELFDEI 112 (287)
T ss_dssp CCCCSCBHHHHH
T ss_pred EccCCCCHHHHH
Confidence 999999998765
No 248
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.17 E-value=2.7e-11 Score=122.19 Aligned_cols=91 Identities=12% Similarity=0.265 Sum_probs=76.4
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 480 (495)
.++|...+.||+|+||+||+|+.. +++.||||++....... ...+.+.+|..++.++ +|||||++++++...+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457888999999999999999985 58899999997653321 2234678899999887 89999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 131 V~E~~~gg~L~~~l 144 (396)
T 4dc2_A 131 VIEYVNGGDLMFHM 144 (396)
T ss_dssp EEECCTTCBHHHHH
T ss_pred EEEcCCCCcHHHHH
Confidence 99999999998875
No 249
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.17 E-value=2.1e-11 Score=117.88 Aligned_cols=88 Identities=30% Similarity=0.522 Sum_probs=74.2
Q ss_pred cCCcccceeccCCceEEEEEEc-----CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-----PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GH 477 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~ 477 (495)
++|...+.||+|+||.||+|++ .+++.||||++..... ...+.|.+|++++.+++||||++++++|... ..
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCH--HHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 4567789999999999999984 3588999999975432 2356799999999999999999999999653 45
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+++|+|.+++
T Consensus 88 ~~lv~e~~~~~~L~~~l 104 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYL 104 (295)
T ss_dssp CEEEEECCTTCBHHHHH
T ss_pred eEEEEEeCCCCCHHHHH
Confidence 78999999999999876
No 250
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.17 E-value=4e-11 Score=114.77 Aligned_cols=91 Identities=26% Similarity=0.487 Sum_probs=78.4
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.++|...+.||+|+||.||+|+. .+|+.||||.+...... ....+.+.+|++++.+++||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35678889999999999999997 57999999999654321 12246799999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
+||+++|+|.+++
T Consensus 90 ~e~~~~~~L~~~l 102 (278)
T 3cok_A 90 LEMCHNGEMNRYL 102 (278)
T ss_dssp EECCTTEEHHHHH
T ss_pred EecCCCCcHHHHH
Confidence 9999999998875
No 251
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.17 E-value=6.1e-11 Score=113.26 Aligned_cols=90 Identities=23% Similarity=0.430 Sum_probs=78.1
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|+.. +|+.||||.+...... ....+.+.+|++.+.+++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 46777899999999999999985 6999999998654321 123567899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 91 e~~~~~~L~~~l 102 (276)
T 2h6d_A 91 EYVSGGELFDYI 102 (276)
T ss_dssp ECCCSCBHHHHH
T ss_pred eccCCCcHHHHH
Confidence 999999998876
No 252
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.16 E-value=6.4e-11 Score=114.68 Aligned_cols=88 Identities=28% Similarity=0.489 Sum_probs=72.6
Q ss_pred CCcccceeccCCceEEEEEEc-----CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKY-----PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHN 478 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~ 478 (495)
.|...+.||+|+||.||+|++ .+++.||||++..... ....+.+.+|++++.+++||||+++++++... ...
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 466779999999999999984 3688999999975432 22357899999999999999999999999876 568
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+++|+|.+++
T Consensus 101 ~lv~e~~~~~~L~~~l 116 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYL 116 (302)
T ss_dssp EEEEECCTTCBHHHHH
T ss_pred EEEEEeCCCCcHHHHH
Confidence 9999999999999886
No 253
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.16 E-value=7.6e-11 Score=114.33 Aligned_cols=90 Identities=21% Similarity=0.344 Sum_probs=78.3
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
+.|...+.||+|+||.||+|.. .+++.||||.+...... ...+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 3577789999999999999987 46899999999755332 235789999999999999999999999999999999999
Q ss_pred ecCCCCHhhhhC
Q 040888 484 YYRNGSLHEFLH 495 (495)
Q Consensus 484 y~~~GsL~~~L~ 495 (495)
|+++|+|.++++
T Consensus 101 ~~~~~~L~~~~~ 112 (303)
T 3a7i_A 101 YLGGGSALDLLE 112 (303)
T ss_dssp CCTTEEHHHHHT
T ss_pred eCCCCcHHHHHh
Confidence 999999998763
No 254
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.16 E-value=3.1e-11 Score=118.99 Aligned_cols=90 Identities=28% Similarity=0.517 Sum_probs=76.2
Q ss_pred ccCCcccceeccCCceEEEEEEcC--------CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEe
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP--------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSE 474 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~ 474 (495)
.++|...+.||+|+||.||+|... ++..||||++..... ....+.+.+|++++.++ +||||++++++|..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc-HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 356778899999999999999863 467899999975432 22356789999999999 99999999999999
Q ss_pred CCEEEEEEEecCCCCHhhhh
Q 040888 475 QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 475 ~~~~~lv~ey~~~GsL~~~L 494 (495)
.+..++||||+++|+|.+++
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l 132 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYL 132 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHH
T ss_pred CCceEEEEECCCCCcHHHHH
Confidence 99999999999999999886
No 255
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.16 E-value=1.9e-11 Score=119.01 Aligned_cols=90 Identities=29% Similarity=0.502 Sum_probs=77.4
Q ss_pred ccCCcccceeccCCceEEEEEEc------CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCC
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY------PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQG 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~ 476 (495)
.++|...+.||+|+||.||+|+. .+++.||||.+..... ....+.+.+|++++.++ +||||++++++|...+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh-HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 45677889999999999999984 3477999999975432 12356799999999999 9999999999999999
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++||||+++|+|.+++
T Consensus 101 ~~~lv~e~~~~~~L~~~l 118 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFL 118 (313)
T ss_dssp SCEEEEECCTTEEHHHHH
T ss_pred CcEEEEecCCCCCHHHHH
Confidence 999999999999999876
No 256
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.16 E-value=2.2e-11 Score=120.56 Aligned_cols=89 Identities=22% Similarity=0.405 Sum_probs=77.8
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCccccccc---------------HHHHHHHHHHHhcCCCCCcceE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRAN---------------SESFSEIVQNISRIRHTNIAEL 468 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~---------------~~~f~~e~~~l~~l~H~niv~l 468 (495)
.++|...+.||+|+||.||+|.. +++.||||++......... .+.|.+|++++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 45788899999999999999999 8999999999754322111 1789999999999999999999
Q ss_pred EEEEEeCCEEEEEEEecCCCCHhhh
Q 040888 469 VGFCSEQGHNILIYDYYRNGSLHEF 493 (495)
Q Consensus 469 ~g~~~~~~~~~lv~ey~~~GsL~~~ 493 (495)
++++...+..++||||+++|+|.++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~ 133 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKF 133 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHH
Confidence 9999999999999999999999887
No 257
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.15 E-value=8.8e-11 Score=115.36 Aligned_cols=80 Identities=23% Similarity=0.338 Sum_probs=71.5
Q ss_pred cceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 410 GRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
.+.||+|+||.||+|... +++.||||++... ....+.+|++.+.+++ |||||++++++...+..++||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 478999999999999984 6899999998643 2457889999999997 99999999999999999999999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 91 ~~L~~~l 97 (325)
T 3kn6_A 91 GELFERI 97 (325)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9998876
No 258
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.15 E-value=6e-11 Score=115.18 Aligned_cols=88 Identities=25% Similarity=0.399 Sum_probs=75.0
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|... +|+.||+|.+..... ...+.+.+|++++.+++||||+++++++...+..++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 45777899999999999999984 689999999975432 224578899999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|+++|+|.+++
T Consensus 87 ~~~~~~L~~~l 97 (304)
T 2jam_A 87 LVSGGELFDRI 97 (304)
T ss_dssp CCCSCBHHHHH
T ss_pred cCCCccHHHHH
Confidence 99999998875
No 259
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.15 E-value=4.1e-11 Score=126.00 Aligned_cols=91 Identities=20% Similarity=0.304 Sum_probs=79.1
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.++|...+.||+|+||.||+|... +|+.||||++...... ....+.+.+|++++.+++|||||++++++...+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467888999999999999999984 6999999999754321 22356788999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
||||++|+|.+++
T Consensus 263 mEy~~gg~L~~~l 275 (576)
T 2acx_A 263 LTLMNGGDLKFHI 275 (576)
T ss_dssp ECCCCSCBHHHHH
T ss_pred EEcCCCCcHHHHH
Confidence 9999999998876
No 260
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.15 E-value=3.1e-11 Score=121.44 Aligned_cols=90 Identities=29% Similarity=0.487 Sum_probs=76.8
Q ss_pred ccCCcccceeccCCceEEEEEEcC--------CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEe
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP--------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSE 474 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~ 474 (495)
.++|...+.||+|+||.||+|+.. .+..||||++..... ....+.+.+|++++.++ +|||||+++++|..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC-HHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 456788899999999999999852 245799999976532 22356799999999999 99999999999999
Q ss_pred CCEEEEEEEecCCCCHhhhh
Q 040888 475 QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 475 ~~~~~lv~ey~~~GsL~~~L 494 (495)
.+..++||||+++|+|.+++
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l 166 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYL 166 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHH
T ss_pred CCceEEEEEecCCCcHHHHH
Confidence 99999999999999999886
No 261
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.15 E-value=8e-11 Score=114.70 Aligned_cols=91 Identities=16% Similarity=0.289 Sum_probs=78.7
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.++|...+.||+|+||.||+|... +++.||+|++....... ...+.+.+|++++.+++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467888999999999999999974 68899999997643221 2246789999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
+||+++|+|.+++
T Consensus 113 ~e~~~~~~L~~~l 125 (309)
T 2h34_A 113 MRLINGVDLAAML 125 (309)
T ss_dssp EECCCCEEHHHHH
T ss_pred EEecCCCCHHHHH
Confidence 9999999999876
No 262
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.15 E-value=6.7e-11 Score=114.55 Aligned_cols=89 Identities=21% Similarity=0.413 Sum_probs=75.4
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.+.|...+.||+|+||.||+|... +++.||+|.+..... ...+.|.+|++++.+++||||+++++++...+..++||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH--HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 356778899999999999999985 589999999875432 23578999999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 96 e~~~~~~l~~~~ 107 (302)
T 2j7t_A 96 EFCPGGAVDAIM 107 (302)
T ss_dssp ECCTTEEHHHHH
T ss_pred EeCCCCcHHHHH
Confidence 999999998765
No 263
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.15 E-value=6.9e-11 Score=120.38 Aligned_cols=91 Identities=16% Similarity=0.301 Sum_probs=74.7
Q ss_pred hccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc------ccHHHHHHHHHHHhcCCCCCcceEEEEEEeC
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR------ANSESFSEIVQNISRIRHTNIAELVGFCSEQ 475 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~ 475 (495)
..++|...+.||+|+||.||+|.. .+++.||||++....... .....+.+|++++.+++|||||++++++. .
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 356899999999999999999987 458999999997543211 11235889999999999999999999975 4
Q ss_pred CEEEEEEEecCCCCHhhhh
Q 040888 476 GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 ~~~~lv~ey~~~GsL~~~L 494 (495)
+..++|||||++|+|.+++
T Consensus 212 ~~~~lv~e~~~~g~L~~~l 230 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKV 230 (419)
T ss_dssp SEEEEEEECCTTCBGGGGT
T ss_pred CceEEEEEcCCCCcHHHHH
Confidence 5679999999999998876
No 264
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.15 E-value=4.6e-11 Score=117.54 Aligned_cols=89 Identities=20% Similarity=0.449 Sum_probs=77.0
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|... +|+.||||++..........+.+.+|++++.+++||||++++++|...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 46778899999999999999985 58999999986554333335678899999999999999999999999999999999
Q ss_pred ecCCCCHhhh
Q 040888 484 YYRNGSLHEF 493 (495)
Q Consensus 484 y~~~GsL~~~ 493 (495)
|+++++|.++
T Consensus 105 ~~~~~~l~~~ 114 (331)
T 4aaa_A 105 FVDHTILDDL 114 (331)
T ss_dssp CCSEEHHHHH
T ss_pred cCCcchHHHH
Confidence 9999888765
No 265
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.15 E-value=7.6e-11 Score=113.79 Aligned_cols=90 Identities=20% Similarity=0.358 Sum_probs=77.2
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||++... +++.||+|.+...... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 45677899999999999999985 5889999998754322 223567899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 95 e~~~~~~L~~~~ 106 (294)
T 2rku_A 95 ELCRRRSLLELH 106 (294)
T ss_dssp ECCTTCBHHHHH
T ss_pred ecCCCCCHHHHH
Confidence 999999998865
No 266
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.15 E-value=7.6e-11 Score=113.97 Aligned_cols=89 Identities=26% Similarity=0.472 Sum_probs=73.4
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|... +|+.||||++..........+.+.+|++++.+++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 56788899999999999999985 68999999997654323335678999999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|++ |+|.+++
T Consensus 83 ~~~-~~L~~~~ 92 (299)
T 2r3i_A 83 FLH-QDLKKFM 92 (299)
T ss_dssp CCS-EEHHHHH
T ss_pred ccc-CCHHHHH
Confidence 997 6888765
No 267
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.15 E-value=1.5e-11 Score=119.89 Aligned_cols=90 Identities=19% Similarity=0.287 Sum_probs=75.3
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc-ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC----EE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR-ANSESFSEIVQNISRIRHTNIAELVGFCSEQG----HN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----~~ 478 (495)
++|...+.||+|+||.||+|.. .+++.||||++....... ...+.|.+|++++.+++|||||++++++.... ..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 4677789999999999999997 568999999997653221 22457899999999999999999999987643 34
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+++|+|.+++
T Consensus 92 ~lv~e~~~g~~L~~~l 107 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIV 107 (311)
T ss_dssp EEEEECCCEEEHHHHH
T ss_pred EEEEecCCCCCHHHHH
Confidence 8999999999999876
No 268
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.15 E-value=2.5e-11 Score=120.07 Aligned_cols=92 Identities=27% Similarity=0.487 Sum_probs=76.7
Q ss_pred HhccCCcccceeccCCceEEEEEEc------CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEe
Q 040888 402 TATANFATGRLLGEGTIGRVYRAKY------PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSE 474 (495)
Q Consensus 402 ~~t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~ 474 (495)
...++|...+.||+|+||.||+|.. .++..||||.+..... ....+.+.+|++++.++ +||||+++++++..
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 3456788899999999999999986 2456899999975432 22356899999999999 99999999999999
Q ss_pred CCEEEEEEEecCCCCHhhhh
Q 040888 475 QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 475 ~~~~~lv~ey~~~GsL~~~L 494 (495)
.+..++||||+++|+|.+++
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l 140 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYL 140 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHH
T ss_pred CCccEEEEecCCCCcHHHHH
Confidence 99999999999999999876
No 269
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.15 E-value=3.9e-11 Score=118.44 Aligned_cols=90 Identities=19% Similarity=0.356 Sum_probs=76.7
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.++|...+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|++++..++||||+++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35678889999999999999997 57899999998754221 12246789999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+ +|+|.+++
T Consensus 88 ~E~~-~g~l~~~l 99 (336)
T 3h4j_B 88 IEYA-GGELFDYI 99 (336)
T ss_dssp ECCC-CEEHHHHH
T ss_pred EECC-CCcHHHHH
Confidence 9999 68888875
No 270
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.14 E-value=9.6e-11 Score=114.61 Aligned_cols=87 Identities=25% Similarity=0.458 Sum_probs=73.8
Q ss_pred CcccceeccCCceEEEEEEcC-----CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--CEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-----DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ--GHNI 479 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~ 479 (495)
|...+.||+|+||.||++.+. +++.||||++..... ....+.|.+|++++.+++||||+++++++... ...+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG-PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC-hHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 366789999999999998752 578999999976532 22356799999999999999999999999884 5789
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||+++|+|.+++
T Consensus 112 lv~e~~~~~~L~~~l 126 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYL 126 (318)
T ss_dssp EEECCCTTCBHHHHG
T ss_pred EEEecccCCcHHHHH
Confidence 999999999999876
No 271
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.14 E-value=7.8e-11 Score=113.25 Aligned_cols=88 Identities=22% Similarity=0.359 Sum_probs=73.3
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccc-----cHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRA-----NSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~-----~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
++|...+.||+|+||.||+|.. .+++.||||++........ ..+.|.+|++++.+++||||+++++++....
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 4677789999999999999998 4689999999865432211 1267999999999999999999999986655
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+++|+|.+++
T Consensus 97 ~lv~e~~~~~~L~~~l 112 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRL 112 (287)
T ss_dssp EEEEECCTTCBHHHHH
T ss_pred eEEEEecCCCCHHHHH
Confidence 6999999999998765
No 272
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.13 E-value=2.8e-11 Score=117.89 Aligned_cols=83 Identities=31% Similarity=0.568 Sum_probs=71.5
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
++|...+.||+|+||.||+|... ++.||||++.... ..+.|.+|++++++++||||+++++++.+ ..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES----ERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT----HHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh----HHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 35667899999999999999984 7789999986432 35689999999999999999999998863 46899999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 81 ~~~~~L~~~l 90 (307)
T 2eva_A 81 AEGGSLYNVL 90 (307)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999999876
No 273
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.13 E-value=5.9e-11 Score=114.00 Aligned_cols=90 Identities=24% Similarity=0.443 Sum_probs=77.4
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|... +++.||||.+...... ....+.+.+|++++.+++||||+++++++...+..++|+
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46778899999999999999985 5789999998654321 123467999999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 94 e~~~~~~L~~~l 105 (284)
T 2vgo_A 94 EFAPRGELYKEL 105 (284)
T ss_dssp CCCTTEEHHHHH
T ss_pred EeCCCCcHHHHH
Confidence 999999998875
No 274
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.13 E-value=7.4e-11 Score=122.49 Aligned_cols=90 Identities=29% Similarity=0.478 Sum_probs=78.5
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
+.|...+.||+|+||.||+|... +|+.||||++...... ....+.+.+|++++.+++|||||++++++...+..++|+
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 45777899999999999999985 6899999999754332 233678999999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 106 e~~~~~~L~~~~ 117 (484)
T 3nyv_A 106 EVYTGGELFDEI 117 (484)
T ss_dssp CCCCSCBHHHHH
T ss_pred ecCCCCCHHHHH
Confidence 999999998765
No 275
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.13 E-value=6.3e-11 Score=124.11 Aligned_cols=91 Identities=19% Similarity=0.302 Sum_probs=78.8
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.++|...+.||+|+||.||+|+.. +|+.||+|++...... ....+.+.+|++++.+++|||||++++++...+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 357888899999999999999985 6999999999754321 12356789999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 264 mE~~~gg~L~~~l 276 (543)
T 3c4z_A 264 MTIMNGGDIRYHI 276 (543)
T ss_dssp ECCCTTCBHHHHH
T ss_pred EEeccCCCHHHHH
Confidence 9999999998876
No 276
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.13 E-value=3.7e-11 Score=118.00 Aligned_cols=90 Identities=26% Similarity=0.388 Sum_probs=74.4
Q ss_pred ccCCcccceeccCCceEEEEEEc------CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY------PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH 477 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (495)
.++|...+.||+|+||.||+|.. .++..||||.+..... .....+|.+|+.++.+++||||+++++++...+.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc-hhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 35678889999999999999985 2477999999975422 2235679999999999999999999999999888
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+++|+|.+++
T Consensus 108 ~~lv~e~~~~~~L~~~l 124 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFL 124 (327)
T ss_dssp CEEEEECCTTEEHHHHH
T ss_pred cEEEEecCCCCcHHHHH
Confidence 99999999999999876
No 277
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.13 E-value=2.6e-11 Score=124.63 Aligned_cols=91 Identities=21% Similarity=0.286 Sum_probs=70.1
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.++|...+.||+|+||.||+|.. .+|+.||||++..... .......+.+|++++.+++||||++++++|...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 45688899999999999999997 4689999999975422 122345688999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
||||++|+|.+++
T Consensus 227 ~e~~~~~~L~~~l 239 (446)
T 4ejn_A 227 MEYANGGELFFHL 239 (446)
T ss_dssp ECCCSSCBHHHHH
T ss_pred EeeCCCCcHHHHH
Confidence 9999999998875
No 278
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.13 E-value=9.2e-11 Score=113.32 Aligned_cols=91 Identities=25% Similarity=0.348 Sum_probs=77.2
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-------cccHHHHHHHHHHHhcCC-CCCcceEEEEEEe
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-------RANSESFSEIVQNISRIR-HTNIAELVGFCSE 474 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-------~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~ 474 (495)
.++|...+.||+|+||.||+|... +|+.||||.+...... ....+.+.+|++++.+++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 356788899999999999999984 6889999999654210 112456889999999996 9999999999999
Q ss_pred CCEEEEEEEecCCCCHhhhh
Q 040888 475 QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 475 ~~~~~lv~ey~~~GsL~~~L 494 (495)
.+..++||||+++|+|.+++
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l 115 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYL 115 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHH
T ss_pred CCeEEEEEeccCCCcHHHHH
Confidence 99999999999999999876
No 279
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.13 E-value=8.8e-11 Score=115.81 Aligned_cols=91 Identities=20% Similarity=0.353 Sum_probs=78.0
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
.++|...+.||+|+||.||++... +++.||+|.+...... ....+.+.+|++++.+++||||+++++++...+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 356778899999999999999985 5889999998754321 22356789999999999999999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 120 ~e~~~~~~L~~~~ 132 (335)
T 2owb_A 120 LELCRRRSLLELH 132 (335)
T ss_dssp ECCCTTCBHHHHH
T ss_pred EecCCCCCHHHHH
Confidence 9999999998865
No 280
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.13 E-value=4.7e-11 Score=115.16 Aligned_cols=89 Identities=21% Similarity=0.368 Sum_probs=71.7
Q ss_pred cCCcccc-eeccCCceEEEEEEc---CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEE
Q 040888 405 ANFATGR-LLGEGTIGRVYRAKY---PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 405 ~~f~~~~-~iG~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
++|.... .||+|+||.||+|.+ .+++.||||.+..........++|.+|++++.+++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4555566 899999999999965 3477899999976543233357899999999999999999999999 5667899
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 95 v~e~~~~~~L~~~l 108 (291)
T 1xbb_A 95 VMEMAELGPLNKYL 108 (291)
T ss_dssp EEECCTTEEHHHHH
T ss_pred EEEeCCCCCHHHHH
Confidence 99999999999876
No 281
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.13 E-value=6.7e-11 Score=117.59 Aligned_cols=91 Identities=16% Similarity=0.242 Sum_probs=78.2
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 480 (495)
.++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+..|.+++..+ +||+|+++++++...+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467888999999999999999985 488999999976432 122356788999999988 89999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 99 v~E~~~gg~L~~~l 112 (353)
T 2i0e_A 99 VMEYVNGGDLMYHI 112 (353)
T ss_dssp EEECCCSCBHHHHH
T ss_pred EEeCCCCCcHHHHH
Confidence 99999999999876
No 282
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.13 E-value=1e-10 Score=114.81 Aligned_cols=88 Identities=24% Similarity=0.403 Sum_probs=74.8
Q ss_pred cCCcccceeccCCceEEEEEEc-----CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe--CCE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-----PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE--QGH 477 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~--~~~ 477 (495)
++|...+.||+|+||.||+|++ .+++.||||++..... ...+.+.+|++++.+++||||+++++++.. ...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP--DQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCH--HHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCH--HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 4577789999999999999984 3588999999976432 235679999999999999999999999974 456
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+++|+|.+++
T Consensus 101 ~~lv~e~~~~~~L~~~l 117 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFL 117 (327)
T ss_dssp EEEEEECCTTCBHHHHH
T ss_pred EEEEEeecCCCCHHHHH
Confidence 88999999999999876
No 283
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.12 E-value=8.9e-11 Score=125.80 Aligned_cols=83 Identities=22% Similarity=0.406 Sum_probs=70.8
Q ss_pred ceeccCCceEEEEEEcC---CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGRVYRAKYP---DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
+.||+|+||.||+|.+. .++.||||+++.........++|.+|++++.+++|||||+++++|.. +..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 57999999999999762 46789999997654433346789999999999999999999999964 557899999999
Q ss_pred CCHhhhh
Q 040888 488 GSLHEFL 494 (495)
Q Consensus 488 GsL~~~L 494 (495)
|+|.+++
T Consensus 454 g~L~~~l 460 (635)
T 4fl3_A 454 GPLNKYL 460 (635)
T ss_dssp EEHHHHH
T ss_pred CCHHHHH
Confidence 9999886
No 284
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.12 E-value=4.5e-11 Score=117.14 Aligned_cols=97 Identities=23% Similarity=0.455 Sum_probs=80.9
Q ss_pred ccHHHHHHhccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEE
Q 040888 395 FSMADLLTATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFC 472 (495)
Q Consensus 395 ~~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~ 472 (495)
+++.++....+.|...+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++.++ +||||+++++++
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 90 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAF 90 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence 34445555678899999999999999999998 568999999986543 2256789999999998 899999999999
Q ss_pred Ee------CCEEEEEEEecCCCCHhhhh
Q 040888 473 SE------QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 473 ~~------~~~~~lv~ey~~~GsL~~~L 494 (495)
.. .+..++||||+++|+|.+++
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l 118 (326)
T 2x7f_A 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLI 118 (326)
T ss_dssp EECC--CCCCEEEEEEECCTTEEHHHHH
T ss_pred eeccCccccceEEEEEEcCCCCcHHHHH
Confidence 87 46789999999999999876
No 285
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.12 E-value=3.3e-11 Score=116.61 Aligned_cols=90 Identities=18% Similarity=0.296 Sum_probs=63.4
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|... +++.||||++...... ...+++.+|++++.+++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ-TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc-hhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 467888899999999999999974 6899999998754322 23467889999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 93 e~~~~~~L~~~l 104 (303)
T 2vwi_A 93 KLLSGGSVLDII 104 (303)
T ss_dssp ECCTTCBHHHHH
T ss_pred hhccCCchHHHH
Confidence 999999998875
No 286
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.12 E-value=3.3e-11 Score=117.52 Aligned_cols=95 Identities=24% Similarity=0.475 Sum_probs=73.2
Q ss_pred HHHhccCCcccceeccCCceEEEEEEcC----CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC
Q 040888 400 LLTATANFATGRLLGEGTIGRVYRAKYP----DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ 475 (495)
Q Consensus 400 ~~~~t~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~ 475 (495)
+....++|...+.||+|+||.||+|... .+..||||.+..........+.|.+|++++.+++||||+++++++...
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 3344567888899999999999999863 345899999976543333356799999999999999999999999875
Q ss_pred CE-----EEEEEEecCCCCHhhhh
Q 040888 476 GH-----NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 ~~-----~~lv~ey~~~GsL~~~L 494 (495)
+. .++|+||+++|+|.+++
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l 132 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYL 132 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHH
T ss_pred cccCCcccEEEEecccCCCHHHHH
Confidence 53 48999999999999876
No 287
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.12 E-value=7.9e-11 Score=125.79 Aligned_cols=82 Identities=26% Similarity=0.446 Sum_probs=70.4
Q ss_pred eeccCCceEEEEEEcC---CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEecCCC
Q 040888 412 LLGEGTIGRVYRAKYP---DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDYYRNG 488 (495)
Q Consensus 412 ~iG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 488 (495)
.||+|+||.||+|.+. ++..||||+++.... ....++|.+|+++|.+++|||||+++++|.. +..++|||||++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS-STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 7999999999999873 466899999976532 2346789999999999999999999999976 5689999999999
Q ss_pred CHhhhhC
Q 040888 489 SLHEFLH 495 (495)
Q Consensus 489 sL~~~L~ 495 (495)
+|.++++
T Consensus 421 ~L~~~l~ 427 (613)
T 2ozo_A 421 PLHKFLV 427 (613)
T ss_dssp BHHHHHT
T ss_pred cHHHHHh
Confidence 9999873
No 288
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.12 E-value=7e-11 Score=114.18 Aligned_cols=88 Identities=22% Similarity=0.407 Sum_probs=75.1
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe--------
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE-------- 474 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~-------- 474 (495)
.++|...+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++.+++||||++++++|..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE---EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH---HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH---HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 35678889999999999999997 479999999996432 235678999999999999999999999865
Q ss_pred -----CCEEEEEEEecCCCCHhhhh
Q 040888 475 -----QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 475 -----~~~~~lv~ey~~~GsL~~~L 494 (495)
.+..++||||+++|+|.+++
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l 106 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLI 106 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHH
T ss_pred cccccCCceEEEEecCCCCCHHHhh
Confidence 34678999999999999876
No 289
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.12 E-value=4.7e-11 Score=119.66 Aligned_cols=91 Identities=18% Similarity=0.301 Sum_probs=69.3
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc-ccHHHHHHHHHH-HhcCCCCCcceEEEEEEeCCEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR-ANSESFSEIVQN-ISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~f~~e~~~-l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
.++|...+.||+|+||.||+|+.. +++.||||++....... ...+.+.+|..+ +..++|||||++++++...+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 356888999999999999999985 58899999997654321 223456677766 577899999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 117 v~E~~~gg~L~~~l 130 (373)
T 2r5t_A 117 VLDYINGGELFYHL 130 (373)
T ss_dssp EEECCCSCBHHHHH
T ss_pred EEeCCCCCcHHHHH
Confidence 99999999998876
No 290
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.12 E-value=1.2e-10 Score=112.63 Aligned_cols=86 Identities=26% Similarity=0.400 Sum_probs=70.7
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhc--CCCCCcceEEEEEEeC----CE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISR--IRHTNIAELVGFCSEQ----GH 477 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~--l~H~niv~l~g~~~~~----~~ 477 (495)
.++|...+.||+|+||.||+|+. +++.||||++.... .+.+.+|.+++.. ++||||+++++++... ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD-----EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc-----chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 35678889999999999999998 68899999986532 3556667777666 8999999999998653 45
Q ss_pred EEEEEEecCCCCHhhhhC
Q 040888 478 NILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L~ 495 (495)
.++||||+++|+|.++++
T Consensus 81 ~~lv~e~~~~g~L~~~l~ 98 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQ 98 (301)
T ss_dssp EEEEECCCTTCBHHHHHT
T ss_pred eEEehhhccCCCHHHHHh
Confidence 789999999999999864
No 291
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.12 E-value=8.4e-11 Score=115.55 Aligned_cols=91 Identities=14% Similarity=0.193 Sum_probs=77.5
Q ss_pred ccCCccc-ceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEE
Q 040888 404 TANFATG-RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 404 t~~f~~~-~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 480 (495)
.+.|... +.||+|+||.||+|... +++.||||++..........+.+.+|+.++.++ +||||+++++++...+..++
T Consensus 27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l 106 (327)
T 3lm5_A 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL 106 (327)
T ss_dssp HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence 3445554 88999999999999985 699999999986544334467899999999999 46999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 107 v~e~~~~~~L~~~~ 120 (327)
T 3lm5_A 107 ILEYAAGGEIFSLC 120 (327)
T ss_dssp EEECCTTEEGGGGG
T ss_pred EEEecCCCcHHHHH
Confidence 99999999998876
No 292
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.12 E-value=1.5e-10 Score=110.54 Aligned_cols=89 Identities=20% Similarity=0.382 Sum_probs=65.7
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 4688889999999999999997 46899999999765332 223567899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+ +|+|.+++
T Consensus 93 e~~-~~~l~~~~ 103 (275)
T 2eue_A 93 EYA-GNELFDYI 103 (275)
T ss_dssp ECC-CEEHHHHH
T ss_pred hhc-CCcHHHHH
Confidence 999 66777654
No 293
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.12 E-value=1.3e-10 Score=113.33 Aligned_cols=87 Identities=18% Similarity=0.376 Sum_probs=72.5
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.+.|...+.||+|+||.||+|... +|+.||||.+.... ..+.+.+|++++.+++||||+++++++...+..++||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 456888899999999999999985 58999999997542 2467899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 104 e~~~~~~L~~~~ 115 (314)
T 3com_A 104 EYCGAGSVSDII 115 (314)
T ss_dssp ECCTTEEHHHHH
T ss_pred ecCCCCCHHHHH
Confidence 999999998875
No 294
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.12 E-value=1.1e-10 Score=115.98 Aligned_cols=89 Identities=27% Similarity=0.420 Sum_probs=75.0
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
+.|...+.||+|+||.||+|.. .+++.||||++...... ....+.|.+|++++.+++|||||+++++|..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3477789999999999999996 57899999999754322 122467899999999999999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||++ |+|.+++
T Consensus 134 e~~~-g~l~~~l 144 (348)
T 1u5q_A 134 EYCL-GSASDLL 144 (348)
T ss_dssp ECCS-EEHHHHH
T ss_pred ecCC-CCHHHHH
Confidence 9997 6777654
No 295
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.11 E-value=1.2e-10 Score=112.15 Aligned_cols=86 Identities=24% Similarity=0.440 Sum_probs=71.8
Q ss_pred Ccccc-eeccCCceEEEEEEcC---CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 407 FATGR-LLGEGTIGRVYRAKYP---DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 407 f~~~~-~iG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
|.... .||+|+||.||+|++. ++..||||.+..... ....+.+.+|++++.+++||||+++++++ ..+..++||
T Consensus 11 ~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 11 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred hhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccc-hhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 33344 8999999999999863 577899999976432 22356799999999999999999999999 556689999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 89 e~~~~~~L~~~l 100 (287)
T 1u59_A 89 EMAGGGPLHKFL 100 (287)
T ss_dssp ECCTTEEHHHHH
T ss_pred EeCCCCCHHHHH
Confidence 999999999886
No 296
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.11 E-value=5.1e-11 Score=117.21 Aligned_cols=92 Identities=29% Similarity=0.481 Sum_probs=77.9
Q ss_pred HhccCCcccceeccCCceEEEEEEcCC------CCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEe
Q 040888 402 TATANFATGRLLGEGTIGRVYRAKYPD------GKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSE 474 (495)
Q Consensus 402 ~~t~~f~~~~~iG~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~ 474 (495)
...++|...+.||+|+||.||+|.... ...||+|.+..... ....+.+.+|++++.++ +||||++++++|..
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH-ADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC-hHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 345678889999999999999998732 34899999976432 22356799999999999 89999999999999
Q ss_pred CCEEEEEEEecCCCCHhhhh
Q 040888 475 QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 475 ~~~~~lv~ey~~~GsL~~~L 494 (495)
.+..++||||+++|+|.+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l 141 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFL 141 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHH
T ss_pred CCceEEEEecCCCCcHHHHH
Confidence 99999999999999999876
No 297
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.11 E-value=7.3e-11 Score=117.80 Aligned_cols=87 Identities=20% Similarity=0.274 Sum_probs=74.6
Q ss_pred hccCCcccceeccCCceEEEEEE------cCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC---CCCcceEEEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAK------YPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR---HTNIAELVGFCS 473 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~------~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~---H~niv~l~g~~~ 473 (495)
..++|...+.||+|+||.||+|. ..+++.||||++.... ..++.+|++++.+++ |+||+++++++.
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 35668888999999999999995 3468899999997532 457888888888887 999999999999
Q ss_pred eCCEEEEEEEecCCCCHhhhh
Q 040888 474 EQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 474 ~~~~~~lv~ey~~~GsL~~~L 494 (495)
..+..++|||||++|+|.+++
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l 158 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAI 158 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHH
T ss_pred cCCCcEEEEeccCCCcHHHHH
Confidence 999999999999999999886
No 298
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.11 E-value=8.9e-11 Score=115.24 Aligned_cols=89 Identities=27% Similarity=0.555 Sum_probs=73.7
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCE--EEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKV--LAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~--vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 480 (495)
++|...+.||+|+||.||+|... ++.. ||+|.+..... ....+.+.+|++++.++ +||||+++++++...+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc-hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 46777899999999999999974 4554 49999875322 22345789999999999 99999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 104 v~e~~~~~~L~~~l 117 (327)
T 1fvr_A 104 AIEYAPHGNLLDFL 117 (327)
T ss_dssp EECCCTTCBHHHHH
T ss_pred EEecCCCCCHHHHH
Confidence 99999999999886
No 299
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.11 E-value=6.3e-11 Score=115.44 Aligned_cols=98 Identities=21% Similarity=0.436 Sum_probs=80.4
Q ss_pred cHHHHHHhccCCcccceeccCCceEEEEEEc------CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceE
Q 040888 396 SMADLLTATANFATGRLLGEGTIGRVYRAKY------PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAEL 468 (495)
Q Consensus 396 ~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l 468 (495)
...++....++|...+.||+|+||.||+|.. .+++.||||.+..... ....+.+.+|++++.++ +||||+++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC-cHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 3445555667899999999999999999984 3567999999976432 22346799999999999 79999999
Q ss_pred EEEEEeCC-EEEEEEEecCCCCHhhhh
Q 040888 469 VGFCSEQG-HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 469 ~g~~~~~~-~~~lv~ey~~~GsL~~~L 494 (495)
+++|...+ ..++|+||+++|+|.+++
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l 123 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYL 123 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHH
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHH
Confidence 99998754 489999999999999876
No 300
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.11 E-value=4.2e-11 Score=114.87 Aligned_cols=89 Identities=24% Similarity=0.418 Sum_probs=73.9
Q ss_pred ccCCcccceeccCCceEEEEEEcCC----CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPD----GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
.++|...+.||+|+||.||+|.... +..||+|.+..... ....+.|.+|+.++.+++||||+++++++. ++..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 4567788999999999999998742 45799999875422 223567999999999999999999999984 55678
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||+++|+|.+++
T Consensus 92 lv~e~~~~~~L~~~l 106 (281)
T 1mp8_A 92 IIMELCTLGELRSFL 106 (281)
T ss_dssp EEEECCTTEEHHHHH
T ss_pred EEEecCCCCCHHHHH
Confidence 999999999999876
No 301
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.11 E-value=8e-11 Score=116.05 Aligned_cols=89 Identities=24% Similarity=0.423 Sum_probs=75.0
Q ss_pred cCCcccceeccCCceEEEEEEcCC-----CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPD-----GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
+.|...+.||+|+||.||+|.... +..||||.+..... ......|.+|++++.+++||||+++++++...+..+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT-EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 356667899999999999998742 23699999975432 223567999999999999999999999999989999
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||+++|+|.+++
T Consensus 123 lv~e~~~~~~L~~~l 137 (333)
T 1mqb_A 123 IITEYMENGALDKFL 137 (333)
T ss_dssp EEEECCTTEEHHHHH
T ss_pred EEEeCCCCCcHHHHH
Confidence 999999999999876
No 302
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.10 E-value=7.6e-11 Score=117.42 Aligned_cols=98 Identities=16% Similarity=0.255 Sum_probs=81.2
Q ss_pred cHHHHHHhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCccccc---------ccHHHHHHHHHHHhcCCCCCcc
Q 040888 396 SMADLLTATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQR---------ANSESFSEIVQNISRIRHTNIA 466 (495)
Q Consensus 396 ~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~---------~~~~~f~~e~~~l~~l~H~niv 466 (495)
...++....++|...+.||+|+||.||+|...+|..||||++....... ...+.+.+|++++.+++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 3577788889999999999999999999999889999999986532211 1136799999999999999999
Q ss_pred eEEEEEEeC-----CEEEEEEEecCCCCHhhhh
Q 040888 467 ELVGFCSEQ-----GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 467 ~l~g~~~~~-----~~~~lv~ey~~~GsL~~~L 494 (495)
++++++... ...++||||++ |+|.+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~ 124 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVI 124 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHH
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHH
Confidence 999999653 35799999998 6787764
No 303
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.10 E-value=8.2e-11 Score=114.82 Aligned_cols=89 Identities=22% Similarity=0.365 Sum_probs=73.2
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe----CCEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE----QGHN 478 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~----~~~~ 478 (495)
.++|...+.||+|+||.||++.. .+++.||||++.... ....+.+.+|++++.+++||||+++++++.. ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE--QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 34677889999999999999997 578999999986532 2235679999999999999999999999973 3467
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++|+||+++|+|.+++
T Consensus 106 ~lv~e~~~~~~L~~~l 121 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEI 121 (317)
T ss_dssp EEEEECCTTCBHHHHH
T ss_pred EEEEEeCCCCcHHHHH
Confidence 8999999999998876
No 304
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.10 E-value=1.8e-10 Score=115.00 Aligned_cols=94 Identities=19% Similarity=0.329 Sum_probs=79.2
Q ss_pred HHhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc------cccHHHHHHHHHHHhcC-CCCCcceEEEEE
Q 040888 401 LTATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ------RANSESFSEIVQNISRI-RHTNIAELVGFC 472 (495)
Q Consensus 401 ~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~f~~e~~~l~~l-~H~niv~l~g~~ 472 (495)
....++|...+.||+|+||.||+|... +|+.||||+++..... ....+.+.+|++++.++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 344567888899999999999999985 6999999998754311 01135688999999999 899999999999
Q ss_pred EeCCEEEEEEEecCCCCHhhhh
Q 040888 473 SEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 473 ~~~~~~~lv~ey~~~GsL~~~L 494 (495)
......++||||+++|+|.+++
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l 191 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYL 191 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHH
T ss_pred eeCCEEEEEEEeCCCCcHHHHH
Confidence 9999999999999999998875
No 305
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.10 E-value=6.3e-11 Score=117.90 Aligned_cols=91 Identities=24% Similarity=0.349 Sum_probs=77.4
Q ss_pred ccCCcccceeccCCceEEEEEEc----CCCCEEEEEEecCcccc--cccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCC
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY----PDGKVLAVKKIDSSHFQ--RANSESFSEIVQNISRI-RHTNIAELVGFCSEQG 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~ 476 (495)
.++|...+.||+|+||.||+|+. .+++.||||+++..... ....+.+.+|++++.++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35788899999999999999987 36899999999754321 12245678899999999 6999999999999999
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++||||+++|+|.+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l 150 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHL 150 (355)
T ss_dssp EEEEEECCCCSCBHHHHH
T ss_pred eEEEEeecCCCCCHHHHH
Confidence 999999999999999876
No 306
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.10 E-value=8e-11 Score=115.34 Aligned_cols=89 Identities=18% Similarity=0.330 Sum_probs=71.7
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc------cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ------RANSESFSEIVQNISRIRHTNIAELVGFCSEQGH 477 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (495)
++|...+.||+|+||.||+|... +++.||||.+...... ......+.+|++++.+++||||+++++++..++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 46788899999999999999974 5889999999754321 112345889999999999999999999987655
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+++|+|.+++
T Consensus 89 ~~lv~e~~~~~~L~~~~ 105 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKV 105 (322)
T ss_dssp EEEEEECCTTEETHHHH
T ss_pred eEEEEecCCCCcHHHHH
Confidence 79999999999998875
No 307
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.10 E-value=1.3e-10 Score=114.94 Aligned_cols=89 Identities=12% Similarity=0.285 Sum_probs=76.7
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCC--CCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRH--TNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv~ 482 (495)
+.|...+.||+|+||.||++...+++.||||++..........+.|.+|++++.+++| +||+++++++..++..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 3477789999999999999999889999999997654333335779999999999987 99999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
|| .+|+|.+++
T Consensus 89 e~-~~~~L~~~l 99 (343)
T 3dbq_A 89 EC-GNIDLNSWL 99 (343)
T ss_dssp CC-CSEEHHHHH
T ss_pred eC-CCCCHHHHH
Confidence 95 578998876
No 308
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.10 E-value=1.1e-10 Score=112.41 Aligned_cols=87 Identities=23% Similarity=0.445 Sum_probs=72.9
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
++|...+.||+|+||.||+|+... .||||++..........+.|.+|++++.+++||||+++++++ ..+..++||||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 457778999999999999998753 599999976544333457799999999999999999999976 45567899999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 101 ~~~~~L~~~l 110 (289)
T 3og7_A 101 CEGSSLYHHL 110 (289)
T ss_dssp CCEEEHHHHH
T ss_pred cCCCcHHHHH
Confidence 9999998876
No 309
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.09 E-value=5.4e-11 Score=117.80 Aligned_cols=85 Identities=21% Similarity=0.264 Sum_probs=73.1
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 481 (495)
.++|...+.||+|+||.||+|... +++.||||.+..... .+.+|++++.++ +|||||++++++.+.+..++|
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 456888899999999999999985 588999999975432 235688888887 799999999999999999999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 95 ~E~~~gg~L~~~i 107 (342)
T 2qr7_A 95 TELMKGGELLDKI 107 (342)
T ss_dssp ECCCCSCBHHHHH
T ss_pred EeCCCCCcHHHHH
Confidence 9999999998875
No 310
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.09 E-value=1.2e-10 Score=113.36 Aligned_cols=87 Identities=22% Similarity=0.408 Sum_probs=72.6
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEEe
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYDY 484 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 484 (495)
++|...+.||+|+||.||+|.... .+|+|.++.........+.|.+|++++.+++||||+++++++. .+..++|+||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~ 112 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQW 112 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred cceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEec
Confidence 467778999999999999998743 5899988764433334578999999999999999999999875 4557899999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
+++|+|.+++
T Consensus 113 ~~~~~L~~~l 122 (307)
T 3lb7_A 113 CEGSSLYKHL 122 (307)
T ss_dssp CSSCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999998876
No 311
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.09 E-value=5.5e-12 Score=126.26 Aligned_cols=134 Identities=20% Similarity=0.233 Sum_probs=106.1
Q ss_pred CCEeEEEcCCCCCcccccccc-CCCCCCcEEECcCCCCCCCCCCCC-------CCCCcEEECcCCcCCC----Ccchhcc
Q 040888 69 SSVTEIKLSGLGLNGQLGYQL-TNLKSVSYLDVSNNNLKDSIPYQL-------PPNLKHLDLSENQFSG----TVPYSIS 136 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~-~~l~~L~~L~Ls~N~l~g~~p~~~-------~~~L~~L~Ls~N~l~g----~~p~~~~ 136 (495)
..++.|+|++|.++......+ ..+++|+.|||++|.++......+ .++|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 589999999999986543333 345689999999999975322221 2789999999999975 3555668
Q ss_pred CCCCCcEEEcccCcCCCc----cchhhhCCCCCcEEEccCCcCCCc----CcccccCCCCCCEEeccCCccccc
Q 040888 137 QMSELKYLNLGSNQLNGQ----LSDMFQKNEKLETLDLSKNQLTGE----LPRSFASLSSLKKLYLQNNQFTGS 202 (495)
Q Consensus 137 ~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~ 202 (495)
.+++|++|+|++|.|+.. ++..+..+++|+.|+|++|.|+.. ++..+...++|++|+|++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 899999999999999753 466778888999999999999863 445566778999999999999854
No 312
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.09 E-value=1e-10 Score=116.43 Aligned_cols=97 Identities=26% Similarity=0.307 Sum_probs=81.7
Q ss_pred cccHHHHHHhccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-----CCCcce
Q 040888 394 PFSMADLLTATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-----HTNIAE 467 (495)
Q Consensus 394 ~~~~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-----H~niv~ 467 (495)
.+++.+.....++|...+.||+|+||.||+|+. .+++.||||++.... ...+.+..|++++.+++ |||||+
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK---KYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH---HHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch---hhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 344555555677899999999999999999998 568999999997532 22456788999999986 999999
Q ss_pred EEEEEEeCCEEEEEEEecCCCCHhhhh
Q 040888 468 LVGFCSEQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 468 l~g~~~~~~~~~lv~ey~~~GsL~~~L 494 (495)
+++++...+..++||||+ +|+|.+++
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~ 126 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEII 126 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHH
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHH
Confidence 999999999999999999 89998875
No 313
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.08 E-value=1.5e-10 Score=113.62 Aligned_cols=88 Identities=31% Similarity=0.566 Sum_probs=73.6
Q ss_pred cCCcccceeccCCceEEEEEEc-----CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC--E
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-----PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG--H 477 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~--~ 477 (495)
++|...+.||+|+||.||+|.+ .+++.||||++.... ....+.|.+|++++.+++||||+++++++...+ .
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC--SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 4577789999999999999984 358899999997643 223568999999999999999999999987644 5
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++|+||+++|+|.+++
T Consensus 119 ~~lv~e~~~~~~L~~~l 135 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYL 135 (326)
T ss_dssp CEEEECCCTTCBHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 78999999999999876
No 314
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.08 E-value=1.7e-10 Score=116.24 Aligned_cols=88 Identities=13% Similarity=0.286 Sum_probs=76.2
Q ss_pred CCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC--CCCcceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR--HTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lv~e 483 (495)
.|...+.||+|+||.||+|...+++.||||++..........+.|.+|++++.+++ |||||++++++...+..++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 47788999999999999999988999999999765433334578999999999996 5999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
+.+|+|.+++
T Consensus 137 -~~~~~L~~~l 146 (390)
T 2zmd_A 137 -CGNIDLNSWL 146 (390)
T ss_dssp -CCSEEHHHHH
T ss_pred -cCCCCHHHHH
Confidence 5688998876
No 315
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.08 E-value=1.2e-10 Score=114.49 Aligned_cols=88 Identities=19% Similarity=0.440 Sum_probs=68.5
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCC----EEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGK----VLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~----~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
++|...+.||+|+||.||+|+.. +++ .||+|.+..... ....+.|.+|++++++++|||||+++++|.... .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 45777899999999999999963 444 368888864332 233578999999999999999999999998765 67
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+|+||+++|+|.+++
T Consensus 93 ~v~e~~~~g~L~~~l 107 (327)
T 3poz_A 93 LITQLMPFGCLLDYV 107 (327)
T ss_dssp EEEECCTTCBHHHHH
T ss_pred EEEEecCCCcHHHHH
Confidence 999999999999876
No 316
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.07 E-value=3e-10 Score=111.41 Aligned_cols=85 Identities=16% Similarity=0.344 Sum_probs=74.8
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEe--CCEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSE--QGHNIL 480 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~--~~~~~l 480 (495)
++|...+.||+|+||.||+|.. .+++.||||++... ..+.+.+|++++.+++ ||||+++++++.. ....++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 5678889999999999999987 56899999998743 2467899999999997 9999999999987 567899
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 111 v~e~~~~~~l~~~~ 124 (330)
T 3nsz_A 111 VFEHVNNTDFKQLY 124 (330)
T ss_dssp EEECCCCCCHHHHG
T ss_pred EEeccCchhHHHHH
Confidence 99999999998875
No 317
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.07 E-value=1.1e-10 Score=111.68 Aligned_cols=84 Identities=24% Similarity=0.507 Sum_probs=72.3
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe---------
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE--------- 474 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~--------- 474 (495)
.+|...+.||+|+||.||+|... +++.||+|++.... +.+.+|++++.+++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 45778899999999999999985 79999999986532 356789999999999999999999864
Q ss_pred -------CCEEEEEEEecCCCCHhhhh
Q 040888 475 -------QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 475 -------~~~~~lv~ey~~~GsL~~~L 494 (495)
....++||||+++|+|.+++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l 111 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWI 111 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHH
T ss_pred ccccccCcceEEEEEeccCCCCHHHHH
Confidence 34578999999999999886
No 318
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.07 E-value=6.8e-11 Score=116.68 Aligned_cols=91 Identities=24% Similarity=0.372 Sum_probs=76.6
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc------ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR------ANSESFSEIVQNISRIRHTNIAELVGFCSEQG 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (495)
.++|...+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|++++.+++||||+++++++...+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 45788889999999999999986 568899999997653211 12345778999999999999999999999999
Q ss_pred EEEEEEEecCCC-CHhhhh
Q 040888 477 HNILIYDYYRNG-SLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~G-sL~~~L 494 (495)
..++||||+.+| +|.+++
T Consensus 103 ~~~lv~e~~~~g~~l~~~~ 121 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFI 121 (335)
T ss_dssp EEEEEEECCTTSCBHHHHH
T ss_pred EEEEEEEeCCCCccHHHHH
Confidence 999999999887 888765
No 319
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.06 E-value=1.2e-10 Score=111.44 Aligned_cols=86 Identities=27% Similarity=0.530 Sum_probs=72.9
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC-CEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ-GHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~-~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|.. .|+.||||.+.... ..+.|.+|++++.+++||||+++++++... +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 35677889999999999999988 48899999997542 256799999999999999999999998654 4679999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++|+|.+++
T Consensus 95 e~~~~~~L~~~l 106 (278)
T 1byg_A 95 EYMAKGSLVDYL 106 (278)
T ss_dssp CCCTTEEHHHHH
T ss_pred ecCCCCCHHHHH
Confidence 999999999876
No 320
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.06 E-value=1.8e-10 Score=110.67 Aligned_cols=90 Identities=18% Similarity=0.306 Sum_probs=71.0
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|.. .+|+.||||++..........+.+.++...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 35677889999999999999997 57899999999765332222344555666688899999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||++ |+|.+++
T Consensus 86 e~~~-~~l~~~l 96 (290)
T 3fme_A 86 ELMD-TSLDKFY 96 (290)
T ss_dssp ECCS-EEHHHHH
T ss_pred ehhc-cchHHHH
Confidence 9997 5876654
No 321
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.05 E-value=1.3e-10 Score=114.24 Aligned_cols=85 Identities=16% Similarity=0.231 Sum_probs=73.8
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|.. .+++.||||.+..... .+.+.+|++++.++ +||||+++++++...+..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 4677889999999999999996 5689999999865432 24588999999999 9999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+ +|+|.+++
T Consensus 85 e~~-~~~L~~~~ 95 (330)
T 2izr_A 85 ELL-GPSLEDLF 95 (330)
T ss_dssp ECC-CCBHHHHH
T ss_pred EeC-CCCHHHHH
Confidence 999 99999875
No 322
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.05 E-value=1.6e-11 Score=130.52 Aligned_cols=155 Identities=12% Similarity=0.083 Sum_probs=103.4
Q ss_pred CCEeEEEcCCCCCc-cccccccCCCCCCcEEECcC-----------CCCCCCCCCCC---CCCCcEEECcCCcCCCCcch
Q 040888 69 SSVTEIKLSGLGLN-GQLGYQLTNLKSVSYLDVSN-----------NNLKDSIPYQL---PPNLKHLDLSENQFSGTVPY 133 (495)
Q Consensus 69 ~~v~~l~L~~n~l~-g~~~~~~~~l~~L~~L~Ls~-----------N~l~g~~p~~~---~~~L~~L~Ls~N~l~g~~p~ 133 (495)
.+++.|+|. +.+. +.++..+..+++|++|+|++ |.+++.....+ .++|++|+|+.|++++..+.
T Consensus 318 ~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~ 396 (592)
T 3ogk_B 318 PNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLE 396 (592)
T ss_dssp TTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHH
T ss_pred cCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHH
Confidence 578888888 4443 34454556778888888883 55553211111 26888888888888877777
Q ss_pred hccC-CCCCcEEEcc----cCcCCCc-----cchhhhCCCCCcEEEccCC--cCCCcCcccccC-CCCCCEEeccCCccc
Q 040888 134 SISQ-MSELKYLNLG----SNQLNGQ-----LSDMFQKNEKLETLDLSKN--QLTGELPRSFAS-LSSLKKLYLQNNQFT 200 (495)
Q Consensus 134 ~~~~-l~~L~~L~L~----~N~l~g~-----~p~~~~~l~~L~~L~ls~N--~l~g~~p~~~~~-l~~L~~L~l~~N~l~ 200 (495)
.+.. +++|+.|+|+ .|.+++. ++..+.++++|+.|+|+.+ .+++..+..+.. +++|+.|+|++|+++
T Consensus 397 ~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~ 476 (592)
T 3ogk_B 397 SIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGES 476 (592)
T ss_dssp HHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSS
T ss_pred HHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCC
Confidence 7665 7888888885 6777763 4555677788888888743 366555555443 777888888888877
Q ss_pred ccc--cccCCcc-CcEEEeecCCCccc
Q 040888 201 GSI--NVLGKLP-LDELNVENNKFSGW 224 (495)
Q Consensus 201 g~~--~~~~~~~-L~~l~l~~N~l~g~ 224 (495)
+.. ..+..++ |+.|++++|.+++.
T Consensus 477 ~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 477 DEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 532 3334445 88888888887654
No 323
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.05 E-value=3.6e-10 Score=111.19 Aligned_cols=161 Identities=15% Similarity=0.156 Sum_probs=101.4
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCCCC--CCCcEEECcCCcC-------C-----------
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLP--PNLKHLDLSENQF-------S----------- 128 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l-------~----------- 128 (495)
.+++.|+|++ +++..-+..|.+|++|+.|+|++|.+...-+..+. .++..+.++.+.. .
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 5677777777 77666566777788888888887776632222332 2333333333110 0
Q ss_pred --------CCcchhc----------------------------cCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccC
Q 040888 129 --------GTVPYSI----------------------------SQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSK 172 (495)
Q Consensus 129 --------g~~p~~~----------------------------~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~ 172 (495)
+.++..+ ..+++|+.|+|++|+++...+..|.++.+|+.|+|++
T Consensus 180 ~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 180 TTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred eeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 0111100 0267888888888888866667788888888888888
Q ss_pred CcCCCcCcccccCCCCCC-EEeccCCcccccc-cccCCcc-CcEEEeecCCCcccCchhhhhc
Q 040888 173 NQLTGELPRSFASLSSLK-KLYLQNNQFTGSI-NVLGKLP-LDELNVENNKFSGWVPEELKDI 232 (495)
Q Consensus 173 N~l~g~~p~~~~~l~~L~-~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N~l~g~~p~~l~~l 232 (495)
| ++..-+..|.++.+|+ .+++.+ +++... ..+..++ |+.+++++|.++..-+..|.++
T Consensus 260 n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~ 320 (329)
T 3sb4_A 260 N-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNG 320 (329)
T ss_dssp T-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTT
T ss_pred c-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCC
Confidence 7 7656666788888888 888877 555433 4555555 8888888887775555455443
No 324
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.05 E-value=1.7e-10 Score=118.05 Aligned_cols=90 Identities=18% Similarity=0.304 Sum_probs=75.7
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC-----CE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ-----GH 477 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~-----~~ 477 (495)
.++|...+.||+|+||.||+|... +++.||||++..........+.+.+|++++.+++|||||++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 457888899999999999999974 588999999976433333356899999999999999999999999776 56
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++|||||+ |+|.+++
T Consensus 105 ~~lv~e~~~-~~L~~~~ 120 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLF 120 (432)
T ss_dssp EEEEEECCS-EEHHHHH
T ss_pred EEEEEecCC-cCHHHHH
Confidence 899999997 5898775
No 325
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.05 E-value=2.1e-10 Score=115.43 Aligned_cols=90 Identities=23% Similarity=0.416 Sum_probs=67.3
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCC--EEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSEQG--HNI 479 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~--~~~ 479 (495)
.++|...+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.++.+++ |||||++++++...+ ..+
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 46788899999999999999987 56999999999754333334567889999999997 999999999998654 689
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+|||||+ |+|.+++
T Consensus 88 lv~e~~~-~~L~~~~ 101 (388)
T 3oz6_A 88 LVFDYME-TDLHAVI 101 (388)
T ss_dssp EEEECCS-EEHHHHH
T ss_pred EEecccC-cCHHHHH
Confidence 9999997 6888765
No 326
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.04 E-value=5e-10 Score=110.09 Aligned_cols=87 Identities=28% Similarity=0.416 Sum_probs=72.4
Q ss_pred HhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcC--CCCCcceEEEEEEeC----
Q 040888 402 TATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI--RHTNIAELVGFCSEQ---- 475 (495)
Q Consensus 402 ~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l--~H~niv~l~g~~~~~---- 475 (495)
...++|...+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+++... +||||+++++++...
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 34567999999999999999999985 8899999985432 34455666666554 999999999999987
Q ss_pred CEEEEEEEecCCCCHhhhh
Q 040888 476 GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 ~~~~lv~ey~~~GsL~~~L 494 (495)
...++||||+++|+|.+++
T Consensus 108 ~~~~lv~e~~~~g~L~~~l 126 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYL 126 (337)
T ss_dssp CEEEEEECCCTTCBHHHHH
T ss_pred CceEEEEeccCCCcHHHHh
Confidence 7889999999999999886
No 327
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.04 E-value=9.7e-11 Score=117.39 Aligned_cols=87 Identities=23% Similarity=0.444 Sum_probs=71.3
Q ss_pred CcccceeccCCceEEEEEEcC--C--CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe-CCEEEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP--D--GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE-QGHNILI 481 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~--~--g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv 481 (495)
|...+.||+|+||.||+|... + +..||||.+..... ....+.|.+|+.++++++|||||+++++|.. ++..++|
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSC-SHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 555688999999999999873 2 24689999875322 2235789999999999999999999999865 4577899
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+++|+|.+++
T Consensus 170 ~e~~~~g~L~~~l 182 (373)
T 3c1x_A 170 LPYMKHGDLRNFI 182 (373)
T ss_dssp EECCTTCBHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 9999999999886
No 328
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.04 E-value=5.8e-10 Score=109.90 Aligned_cols=87 Identities=28% Similarity=0.473 Sum_probs=75.1
Q ss_pred HhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhc--CCCCCcceEEEEEEeCC---
Q 040888 402 TATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISR--IRHTNIAELVGFCSEQG--- 476 (495)
Q Consensus 402 ~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~--l~H~niv~l~g~~~~~~--- 476 (495)
...++|...+.||+|+||.||+|+. +|+.||||++... ..+.+.+|++++.. ++||||+++++++...+
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 3456789999999999999999998 5889999998643 24567888888887 79999999999998876
Q ss_pred -EEEEEEEecCCCCHhhhh
Q 040888 477 -HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 -~~~lv~ey~~~GsL~~~L 494 (495)
..++||||+++|+|.+++
T Consensus 113 ~~~~lv~e~~~~g~L~~~l 131 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYL 131 (342)
T ss_dssp CCEEEEECCCTTCBHHHHH
T ss_pred ceeEEEEeecCCCcHHHHH
Confidence 789999999999999886
No 329
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.04 E-value=9.4e-11 Score=117.22 Aligned_cols=90 Identities=18% Similarity=0.269 Sum_probs=68.9
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC------
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG------ 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------ 476 (495)
.+.|...+.||+|+||.||+|.. .+|+.||||++..........+.+.+|++++.+++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35678889999999999999997 56999999999654332233567899999999999999999999997653
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++||||| +++|.+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~ 120 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLM 120 (367)
T ss_dssp CCEEEEECC-SEEHHHHH
T ss_pred eEEEEEecC-CCCHHHHH
Confidence 459999999 78998775
No 330
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.04 E-value=3.4e-10 Score=112.20 Aligned_cols=88 Identities=20% Similarity=0.457 Sum_probs=73.4
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC--------
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ-------- 475 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~-------- 475 (495)
++|...+.||+|+||.||+|.. .+|+.||||++............+.+|++++.+++||||++++++|...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 4677889999999999999998 5689999999976544333456788999999999999999999999873
Q ss_pred CEEEEEEEecCCCCHhhh
Q 040888 476 GHNILIYDYYRNGSLHEF 493 (495)
Q Consensus 476 ~~~~lv~ey~~~GsL~~~ 493 (495)
+..++||||+++ +|.+.
T Consensus 97 ~~~~lv~e~~~~-~l~~~ 113 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGL 113 (351)
T ss_dssp CEEEEEEECCSE-EHHHH
T ss_pred ceEEEEEeccCC-CHHHH
Confidence 468999999985 66554
No 331
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.04 E-value=1.5e-10 Score=119.22 Aligned_cols=90 Identities=14% Similarity=0.310 Sum_probs=66.0
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC-----CE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ-----GH 477 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~-----~~ 477 (495)
.++|...+.||+|+||.||+|... +++.||||++..........+.+.+|++++.+++|||||+++++|... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 357888999999999999999874 689999999975433333356799999999999999999999999543 46
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+. |+|.+++
T Consensus 132 ~~lv~e~~~-~~L~~~~ 147 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLF 147 (458)
T ss_dssp EEEEECCCS-EEHHHHH
T ss_pred EEEEEeccc-cchhhhc
Confidence 899999985 6887765
No 332
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.04 E-value=8.7e-11 Score=115.29 Aligned_cols=88 Identities=24% Similarity=0.404 Sum_probs=71.8
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 483 (495)
++|...+.||+|+||.||+|... +++.||||++...... .....+.+|++++.+++||||+++++++...+..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 46778899999999999999985 6899999999754321 112245679999999999999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|++ |+|.+++
T Consensus 81 ~~~-~~l~~~~ 90 (324)
T 3mtl_A 81 YLD-KDLKQYL 90 (324)
T ss_dssp CCS-EEHHHHH
T ss_pred ccc-cCHHHHH
Confidence 997 5887764
No 333
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.03 E-value=4e-10 Score=109.19 Aligned_cols=89 Identities=24% Similarity=0.402 Sum_probs=71.7
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc--cccHHHHHHHHHHHhcCCCCCcceEEEEEEe--CCEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ--RANSESFSEIVQNISRIRHTNIAELVGFCSE--QGHN 478 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~--~~~~ 478 (495)
.++|...+.||+|+||.||+|... +++.||+|.+...... ....+.+.+|++++.+++||||+++++++.. .+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 357888999999999999999984 6889999999754321 1235679999999999999999999999953 4578
Q ss_pred EEEEEecCCCCHhhh
Q 040888 479 ILIYDYYRNGSLHEF 493 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~ 493 (495)
++||||+++| |.++
T Consensus 84 ~lv~e~~~~~-l~~~ 97 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEM 97 (305)
T ss_dssp EEEEECCSEE-HHHH
T ss_pred EEEehhccCC-HHHH
Confidence 9999999876 5554
No 334
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.03 E-value=2.5e-10 Score=113.02 Aligned_cols=91 Identities=21% Similarity=0.405 Sum_probs=70.0
Q ss_pred hccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccccc---ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQR---ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN 478 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (495)
..++|...+.||+|+||.||+|... +|+.||||++....... ...+.+.+|++++.+++||||+++++++...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 3467888999999999999999985 58999999997543211 1134688999999999999999999999999999
Q ss_pred EEEEEecCCCCHhhhh
Q 040888 479 ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~L 494 (495)
++||||+++ +|.+++
T Consensus 88 ~lv~e~~~~-~l~~~~ 102 (346)
T 1ua2_A 88 SLVFDFMET-DLEVII 102 (346)
T ss_dssp EEEEECCSE-EHHHHH
T ss_pred EEEEEcCCC-CHHHHH
Confidence 999999985 787765
No 335
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.03 E-value=3e-10 Score=108.86 Aligned_cols=89 Identities=28% Similarity=0.480 Sum_probs=73.3
Q ss_pred ccCCcccceeccCCceEEEEEEcCC----CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPD----GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
.++|...+.||+|+||.||+|+... +..||||.+..... ....+.|.+|++++.+++||||+++++++.. +..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT-LDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC-HHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC-chHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 4567788999999999999998632 34699999976432 2235679999999999999999999999865 4568
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||+++|+|.+++
T Consensus 89 ~v~e~~~~~~L~~~l 103 (281)
T 3cc6_A 89 IIMELYPYGELGHYL 103 (281)
T ss_dssp EEEECCTTCBHHHHH
T ss_pred EEEecCCCCCHHHHH
Confidence 999999999999876
No 336
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.02 E-value=1.5e-10 Score=112.77 Aligned_cols=97 Identities=11% Similarity=0.261 Sum_probs=80.8
Q ss_pred HHHHHHhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC--CCCcceEEEEEEe
Q 040888 397 MADLLTATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR--HTNIAELVGFCSE 474 (495)
Q Consensus 397 ~~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~--H~niv~l~g~~~~ 474 (495)
++.+....++|...+.||+|+||.||++...+++.||||++..........+.+.+|++++.+++ |+||+++++++..
T Consensus 20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~ 99 (313)
T 3cek_A 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 99 (313)
T ss_dssp CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred eeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence 33444445678889999999999999999988999999999765433334578999999999997 5999999999999
Q ss_pred CCEEEEEEEecCCCCHhhhh
Q 040888 475 QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 475 ~~~~~lv~ey~~~GsL~~~L 494 (495)
.+..++||| +.+|+|.+++
T Consensus 100 ~~~~~lv~e-~~~~~L~~~l 118 (313)
T 3cek_A 100 DQYIYMVME-CGNIDLNSWL 118 (313)
T ss_dssp SSEEEEEEC-CCSEEHHHHH
T ss_pred CCEEEEEEe-cCCCcHHHHH
Confidence 999999999 5678998875
No 337
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.02 E-value=4.5e-10 Score=110.77 Aligned_cols=90 Identities=18% Similarity=0.292 Sum_probs=73.3
Q ss_pred hccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHH-HhcCCCCCcceEEEEEEeCCEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQN-ISRIRHTNIAELVGFCSEQGHNIL 480 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~-l~~l~H~niv~l~g~~~~~~~~~l 480 (495)
..++|...+.||+|+||.||+|.. .+|+.||||++....... ...++..|+.. +..++||||+++++++...+..++
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH-HHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH-HHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 356788889999999999999997 578999999997653322 23455556555 788999999999999999999999
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++ +|.+++
T Consensus 128 v~e~~~~-~L~~~l 140 (340)
T 3an0_A 128 CMELMDT-SLDKFY 140 (340)
T ss_dssp EECCCSE-EHHHHH
T ss_pred EHHHhhC-cHHHHH
Confidence 9999975 887765
No 338
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.02 E-value=3.7e-10 Score=113.47 Aligned_cols=86 Identities=26% Similarity=0.380 Sum_probs=68.2
Q ss_pred HhccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC-----
Q 040888 402 TATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ----- 475 (495)
Q Consensus 402 ~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~----- 475 (495)
...++|...+.||+|+||.||+|.. .+|+.||||++..... ...+|++++++++|||||++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 4466788899999999999999987 5799999999865422 234799999999999999999999543
Q ss_pred ---------------------------------CEEEEEEEecCCCCHhhhh
Q 040888 476 ---------------------------------GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 ---------------------------------~~~~lv~ey~~~GsL~~~L 494 (495)
...++||||++ |+|.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l 128 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVL 128 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHH
Confidence 34789999998 5776654
No 339
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.02 E-value=4.2e-10 Score=112.64 Aligned_cols=90 Identities=16% Similarity=0.227 Sum_probs=74.3
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC------
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG------ 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------ 476 (495)
.++|...+.||+|+||.||+|.. .+++.||||++..........+.+.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 35788889999999999999987 46889999999754332333567899999999999999999999997654
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++||||+++ +|.+++
T Consensus 104 ~~~lv~e~~~~-~l~~~~ 120 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVI 120 (371)
T ss_dssp EEEEEEECCSE-EHHHHH
T ss_pred ceEEEEEcCCC-CHHHHH
Confidence 78999999974 676654
No 340
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.02 E-value=2.8e-10 Score=109.85 Aligned_cols=87 Identities=22% Similarity=0.366 Sum_probs=71.3
Q ss_pred CcccceeccCCceEEEEEEcC-C---CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE-EEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYP-D---GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN-ILI 481 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~-~---g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~-~lv 481 (495)
|...+.||+|+||.||+|... + +..||+|.+..... ....+.|.+|++++++++||||+++++++...+.. ++|
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE-MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeecccccc-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 445688999999999999863 2 33799999875432 22356799999999999999999999999876654 899
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
+||+.+|+|.+++
T Consensus 102 ~e~~~~~~L~~~~ 114 (298)
T 3pls_A 102 LPYMCHGDLLQFI 114 (298)
T ss_dssp ECCCTTCBHHHHH
T ss_pred EecccCCCHHHHH
Confidence 9999999999876
No 341
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.01 E-value=3.6e-10 Score=110.11 Aligned_cols=87 Identities=23% Similarity=0.290 Sum_probs=68.0
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEE----------
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCS---------- 473 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~---------- 473 (495)
++|...+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++.+++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSH--HHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCCh--HHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 46777899999999999999985 489999999875432 23567899999999999999999999884
Q ss_pred ----eCCEEEEEEEecCCCCHhhhh
Q 040888 474 ----EQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 474 ----~~~~~~lv~ey~~~GsL~~~L 494 (495)
.....++||||++ |+|.+++
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~ 112 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVL 112 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHH
T ss_pred ccccccCceeEEeeccC-CCHHHHh
Confidence 3467899999998 6998876
No 342
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.01 E-value=1.6e-10 Score=125.17 Aligned_cols=89 Identities=16% Similarity=0.267 Sum_probs=73.7
Q ss_pred cCCcccceeccCCceEEEEEEcC--CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE-----
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP--DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH----- 477 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~--~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~----- 477 (495)
++|...+.||+|+||.||+|... +|+.||||++..... ....+.|.+|++++.+++|||||+++++|...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD-AEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC-HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC-HHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 57888999999999999999974 589999999865322 2234678999999999999999999999987654
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++|||||++|+|.+++
T Consensus 159 ~~lv~E~~~g~~L~~~~ 175 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSK 175 (681)
T ss_dssp EEEEEECCCCEECC---
T ss_pred eEEEEEeCCCCcHHHHH
Confidence 69999999999998765
No 343
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.01 E-value=2.5e-10 Score=110.35 Aligned_cols=88 Identities=23% Similarity=0.428 Sum_probs=71.7
Q ss_pred CCcccceeccCCceEEEEEEcCC----CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe-CCEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPD----GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE-QGHNIL 480 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~-~~~~~l 480 (495)
.|...+.||+|+||.||+|...+ ...+|+|.+..... ....+.|.+|++++++++||||++++++|.. ++..++
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCC-HHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 46667899999999999998742 23689999875432 2235679999999999999999999999765 456789
Q ss_pred EEEecCCCCHhhhh
Q 040888 481 IYDYYRNGSLHEFL 494 (495)
Q Consensus 481 v~ey~~~GsL~~~L 494 (495)
||||+++|+|.+++
T Consensus 105 v~e~~~~~~L~~~l 118 (298)
T 3f66_A 105 VLPYMKHGDLRNFI 118 (298)
T ss_dssp EEECCTTCBHHHHH
T ss_pred EEeCCCCCCHHHHH
Confidence 99999999999876
No 344
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.01 E-value=4.7e-11 Score=116.60 Aligned_cols=96 Identities=21% Similarity=0.407 Sum_probs=79.7
Q ss_pred HHHHHhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE
Q 040888 398 ADLLTATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH 477 (495)
Q Consensus 398 ~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (495)
++.....++|...+.||+|+||.||+|...+ .+|+|++..........+.|.+|++++.+++||||+++++++...+.
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 103 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH 103 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence 3444456778889999999999999998854 48999987653322334568889999999999999999999999999
Q ss_pred EEEEEEecCCCCHhhhhC
Q 040888 478 NILIYDYYRNGSLHEFLH 495 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L~ 495 (495)
.++|+||+++|+|.++++
T Consensus 104 ~~iv~e~~~~~~L~~~l~ 121 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVR 121 (319)
T ss_dssp EEEECBCCCSEEHHHHTT
T ss_pred eEEEeecccCCcHHHHHH
Confidence 999999999999998863
No 345
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.01 E-value=3.3e-10 Score=116.85 Aligned_cols=89 Identities=17% Similarity=0.232 Sum_probs=73.4
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC------C
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ------G 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~------~ 476 (495)
.++|...+.||+|+||.||+|.. .+++.||||++..........+.+.+|+++++.++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46788899999999999999987 4689999999976533333456789999999999999999999999654 3
Q ss_pred EEEEEEEecCCCCHhhh
Q 040888 477 HNILIYDYYRNGSLHEF 493 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~ 493 (495)
..++|||||+++ |.+.
T Consensus 141 ~~~lv~E~~~~~-l~~~ 156 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQV 156 (464)
T ss_dssp EEEEEEECCSEE-HHHH
T ss_pred eEEEEEeCCCCC-HHHH
Confidence 579999999864 5554
No 346
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.01 E-value=9.4e-10 Score=108.16 Aligned_cols=145 Identities=16% Similarity=0.191 Sum_probs=115.7
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCC----CCCCCCC--------------------------------
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNL----KDSIPYQ-------------------------------- 112 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l----~g~~p~~-------------------------------- 112 (495)
.+++.|+|++|.+....+..|.++..+..+.+..+.. ...-...
T Consensus 124 ~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~ 203 (329)
T 3sb4_A 124 DNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRD 203 (329)
T ss_dssp TTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGG
T ss_pred cccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccc
Confidence 6899999999999877778888888888887766321 0000000
Q ss_pred --------------------CCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCc-EEEcc
Q 040888 113 --------------------LPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLE-TLDLS 171 (495)
Q Consensus 113 --------------------~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~-~L~ls 171 (495)
..++|+.|+|++|+++...+..|.++.+|+.|+|.+| ++..-+.+|.++.+|+ .|++.
T Consensus 204 ~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~ 282 (329)
T 3sb4_A 204 INFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELP 282 (329)
T ss_dssp CSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEEC
T ss_pred cceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEc
Confidence 0368999999999999666678999999999999998 8767778899999999 99999
Q ss_pred CCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEE
Q 040888 172 KNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELN 215 (495)
Q Consensus 172 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~ 215 (495)
+ +++..-+..|.+|++|+.+++++|+++... ..+...+ |+.++
T Consensus 283 ~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 283 A-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp T-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred c-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 9 787677789999999999999999998766 5666664 77665
No 347
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.00 E-value=1.7e-10 Score=113.29 Aligned_cols=88 Identities=23% Similarity=0.465 Sum_probs=70.5
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCE----EEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKV----LAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~----vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
++|...+.||+|+||.||+|... +++. ||+|.+..... ....+.+.+|+.++.+++|||||+++++|. ++..+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 35777899999999999999974 4443 78888754322 122356788999999999999999999986 45688
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+|+||+++|+|.+++
T Consensus 91 ~v~e~~~~~~L~~~l 105 (325)
T 3kex_A 91 LVTQYLPLGSLLDHV 105 (325)
T ss_dssp EEEECCTTCBSHHHH
T ss_pred EEEEeCCCCCHHHHH
Confidence 999999999998876
No 348
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=98.99 E-value=4.5e-10 Score=113.62 Aligned_cols=83 Identities=14% Similarity=0.235 Sum_probs=68.1
Q ss_pred cCCccc-ceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHh-cCCCCCcceEEEEEEe----CCE
Q 040888 405 ANFATG-RLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNIS-RIRHTNIAELVGFCSE----QGH 477 (495)
Q Consensus 405 ~~f~~~-~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~-~l~H~niv~l~g~~~~----~~~ 477 (495)
++|... +.||+|+||+||+|... +++.||||++.. ...+.+|++++. ..+|||||++++++.. .+.
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~ 133 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence 455544 68999999999999974 689999999853 235678888874 4589999999999876 456
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++|||||++|+|.+++
T Consensus 134 ~~lv~E~~~gg~L~~~l 150 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRI 150 (400)
T ss_dssp EEEEEECCCSEEHHHHH
T ss_pred EEEEEEeCCCCcHHHHH
Confidence 88999999999999886
No 349
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=98.99 E-value=2.1e-10 Score=112.25 Aligned_cols=92 Identities=21% Similarity=0.412 Sum_probs=72.2
Q ss_pred HhccCCcccceeccCCceEEEEEEc--CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC---CCCCcceEEEEEE---
Q 040888 402 TATANFATGRLLGEGTIGRVYRAKY--PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI---RHTNIAELVGFCS--- 473 (495)
Q Consensus 402 ~~t~~f~~~~~iG~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l---~H~niv~l~g~~~--- 473 (495)
.+.++|...+.||+|+||.||+|.. .+|+.||||++............+.+|++++..+ +||||++++++|.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3456788899999999999999997 4688999999875433222234566777777665 8999999999997
Q ss_pred --eCCEEEEEEEecCCCCHhhhh
Q 040888 474 --EQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 474 --~~~~~~lv~ey~~~GsL~~~L 494 (495)
.....++||||++ |+|.+++
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l 109 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYL 109 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHH
T ss_pred cCCCceEEEEEecCC-CCHHHHH
Confidence 4456789999998 6998875
No 350
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=98.98 E-value=3.9e-10 Score=112.83 Aligned_cols=90 Identities=16% Similarity=0.290 Sum_probs=74.9
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEE----
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHN---- 478 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~---- 478 (495)
.++|...+.||+|+||.||+|.. .+|+.||||++..........+.+.+|++++.+++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 35678889999999999999987 4689999999976543333357789999999999999999999999876654
Q ss_pred --EEEEEecCCCCHhhhh
Q 040888 479 --ILIYDYYRNGSLHEFL 494 (495)
Q Consensus 479 --~lv~ey~~~GsL~~~L 494 (495)
++||||++ |+|.+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~ 137 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIM 137 (371)
T ss_dssp CCEEEEECCC-EEHHHHT
T ss_pred eEEEEEcccc-ccHHHHh
Confidence 99999997 6887654
No 351
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.98 E-value=4.3e-10 Score=121.34 Aligned_cols=92 Identities=16% Similarity=0.238 Sum_probs=78.1
Q ss_pred hccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 479 (495)
..++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+..|.+++..+ +||+|+++++++...+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3567889999999999999999985 588999999975422 122356788999999987 7999999999999999999
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+||||+++|+|.+++
T Consensus 419 lV~E~~~gg~L~~~l 433 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHI 433 (674)
T ss_dssp EEEECCCSCBHHHHH
T ss_pred EEEeCcCCCcHHHHH
Confidence 999999999999876
No 352
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=98.98 E-value=1e-09 Score=106.58 Aligned_cols=90 Identities=22% Similarity=0.397 Sum_probs=70.5
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccc---ccccHHHHHHHHHHHhcCC---CCCcceEEEEEEeCC
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHF---QRANSESFSEIVQNISRIR---HTNIAELVGFCSEQG 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~f~~e~~~l~~l~---H~niv~l~g~~~~~~ 476 (495)
.++|...+.||+|+||.||+|.. .+++.||||++..... .......+.+|++++.+++ ||||++++++|....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 56788899999999999999997 5689999999864321 1112356777887777664 999999999998765
Q ss_pred -----EEEEEEEecCCCCHhhhh
Q 040888 477 -----HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 -----~~~lv~ey~~~GsL~~~L 494 (495)
..++||||++ |+|.+++
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~ 109 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYL 109 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHH
T ss_pred CCCceeEEEEehhhh-cCHHHHH
Confidence 4789999997 6998875
No 353
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=98.97 E-value=8.6e-10 Score=106.75 Aligned_cols=83 Identities=14% Similarity=0.246 Sum_probs=69.4
Q ss_pred cCCccc-ceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHH-hcCCCCCcceEEEEEEe----CCE
Q 040888 405 ANFATG-RLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNI-SRIRHTNIAELVGFCSE----QGH 477 (495)
Q Consensus 405 ~~f~~~-~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l-~~l~H~niv~l~g~~~~----~~~ 477 (495)
++|... +.||+|+||.||+|.. .+++.||+|++.. ...+.+|++++ ...+||||+++++++.. ...
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 345554 7899999999999997 5689999999853 24567888887 56699999999999987 567
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+++|+|.+++
T Consensus 90 ~~lv~e~~~~~~L~~~l 106 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRI 106 (299)
T ss_dssp EEEEECCCCSCBHHHHH
T ss_pred EEEEEeecCCCcHHHHH
Confidence 89999999999999876
No 354
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=98.97 E-value=4.2e-10 Score=111.73 Aligned_cols=89 Identities=16% Similarity=0.293 Sum_probs=73.8
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE------
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH------ 477 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~------ 477 (495)
++|...+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.++.+++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 5677789999999999999997 468999999997643333335678999999999999999999999987653
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||++ |+|.+++
T Consensus 104 ~~lv~e~~~-~~l~~~~ 119 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIM 119 (353)
T ss_dssp CEEEEECCS-EEGGGTT
T ss_pred EEEEecccc-CCHHHHh
Confidence 489999997 6887764
No 355
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=98.96 E-value=4.9e-10 Score=110.38 Aligned_cols=90 Identities=16% Similarity=0.202 Sum_probs=71.2
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCccc------ccccHHHHHHHHHHHhcCC---------CCCcceE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHF------QRANSESFSEIVQNISRIR---------HTNIAEL 468 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~------~~~~~~~f~~e~~~l~~l~---------H~niv~l 468 (495)
.++|...+.||+|+||.||+|+. +|+.||||++..... .....+.+.+|++++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 34577789999999999999998 789999999975432 1122478899999998886 8888888
Q ss_pred EEEEE------------------------------eCCEEEEEEEecCCCCHhhhh
Q 040888 469 VGFCS------------------------------EQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 469 ~g~~~------------------------------~~~~~~lv~ey~~~GsL~~~L 494 (495)
.+.+. ..+..++||||+++|++.+.+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~ 153 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQM 153 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGG
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHH
Confidence 88754 157889999999999765543
No 356
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=98.96 E-value=4.6e-10 Score=120.73 Aligned_cols=91 Identities=23% Similarity=0.409 Sum_probs=75.1
Q ss_pred HhccCCcccceeccCCceEEEEEEcCC----CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCE
Q 040888 402 TATANFATGRLLGEGTIGRVYRAKYPD----GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGH 477 (495)
Q Consensus 402 ~~t~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (495)
...++|...+.||+|+||.||+|.+.. +..||||++..... ....+.|.+|+.++++++|||||++++++. ++.
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 334668888999999999999998742 45799999875432 223567999999999999999999999985 456
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+++|+|.+++
T Consensus 465 ~~lv~E~~~~g~L~~~l 481 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFL 481 (656)
T ss_dssp CEEEEECCTTCBHHHHH
T ss_pred eEEEEEcCCCCcHHHHH
Confidence 89999999999999876
No 357
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=98.96 E-value=6.7e-10 Score=109.11 Aligned_cols=88 Identities=19% Similarity=0.440 Sum_probs=72.4
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCC----EEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGK----VLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~----~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
++|...+.||+|+||.||+|... +++ .||+|.+..... ....+.+.+|++++.+++||||++++++|.... .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSS-CCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 46778899999999999999973 444 357887764332 234678999999999999999999999998765 78
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+|+||+++|+|.+++
T Consensus 93 ~v~~~~~~g~L~~~l 107 (327)
T 3lzb_A 93 LITQLMPFGCLLDYV 107 (327)
T ss_dssp EEECCCSSCBHHHHH
T ss_pred EEEEecCCCcHHHHH
Confidence 999999999999876
No 358
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=98.96 E-value=1.2e-09 Score=107.20 Aligned_cols=88 Identities=17% Similarity=0.267 Sum_probs=70.4
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHH-HHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQ-NISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|... +|+.||||++...... ...+++..|+. +++.++||||+++++++...+..++||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE-KEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCH-HHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCc-hHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 56777899999999999999984 6899999999764321 22345666665 778889999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+++ +|.+++
T Consensus 101 e~~~~-~l~~~~ 111 (327)
T 3aln_A 101 ELMST-SFDKFY 111 (327)
T ss_dssp CCCSE-EHHHHH
T ss_pred eecCC-ChHHHH
Confidence 99985 776553
No 359
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=98.96 E-value=1.6e-10 Score=115.99 Aligned_cols=90 Identities=14% Similarity=0.201 Sum_probs=71.0
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccc-cccHHHHHHHH---HHHhcCCCCCcceEE-------EE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ-RANSESFSEIV---QNISRIRHTNIAELV-------GF 471 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~f~~e~---~~l~~l~H~niv~l~-------g~ 471 (495)
.++|...+.||+|+||.||+|.. .+|+.||||++...... ....+.|.+|+ +.+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45677789999999999999997 56999999999754221 22357799999 566677899999998 66
Q ss_pred EEeCC-----------------EEEEEEEecCCCCHhhhh
Q 040888 472 CSEQG-----------------HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 472 ~~~~~-----------------~~~lv~ey~~~GsL~~~L 494 (495)
+...+ ..++||||+ +|+|.+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l 190 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFG 190 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHH
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHH
Confidence 66543 278999999 68999876
No 360
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=98.96 E-value=3.3e-10 Score=113.23 Aligned_cols=90 Identities=17% Similarity=0.259 Sum_probs=68.5
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC------C
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ------G 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~------~ 476 (495)
.++|...+.||+|+||.||+|.. .+|+.||||++..........+.+.+|++++++++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 35788889999999999999986 5689999999975433223356788999999999999999999999754 4
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++|+||+ +++|.+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~ 124 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIV 124 (367)
T ss_dssp CCEEEEECC-CEECC---
T ss_pred eEEEEeccc-CCCHHHHH
Confidence 578999999 67887765
No 361
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=98.95 E-value=7.4e-10 Score=109.72 Aligned_cols=89 Identities=22% Similarity=0.363 Sum_probs=74.0
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC-----CE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ-----GH 477 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~-----~~ 477 (495)
.++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|++++.+++||||+++++++... ..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK-PLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccccc-chHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 457888899999999999999984 689999999965322 22346788999999999999999999998764 57
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++|+||++ |+|.+++
T Consensus 89 ~~lv~e~~~-~~L~~~~ 104 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVI 104 (353)
T ss_dssp EEEEECCCS-EEHHHHH
T ss_pred EEEEEeccC-ccHHHHH
Confidence 899999997 6888764
No 362
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.94 E-value=2.3e-10 Score=121.65 Aligned_cols=102 Identities=15% Similarity=0.186 Sum_probs=68.3
Q ss_pred CEeEEEcCCCC-Ccc-ccccccCCCCCCcEEECcCCCCCCCCCCCC------CCCCcEEECcCCcCC----CCcchhccC
Q 040888 70 SVTEIKLSGLG-LNG-QLGYQLTNLKSVSYLDVSNNNLKDSIPYQL------PPNLKHLDLSENQFS----GTVPYSISQ 137 (495)
Q Consensus 70 ~v~~l~L~~n~-l~g-~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~------~~~L~~L~Ls~N~l~----g~~p~~~~~ 137 (495)
+++.|+|+++. ++. .++....++++|++|+|++|.+++.-+..+ .++|++|+|++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 38888888776 221 123334467888888888887765422111 168888888888887 334555667
Q ss_pred CCCCcEEEcccCcCCCccchhhhCCCCCcEEEccC
Q 040888 138 MSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSK 172 (495)
Q Consensus 138 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~ 172 (495)
+++|+.|+|++|.+.+ +|..+..+++|+.|+++.
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 7888888888888775 566677777777777764
No 363
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=98.94 E-value=6.1e-10 Score=107.07 Aligned_cols=89 Identities=24% Similarity=0.361 Sum_probs=65.7
Q ss_pred cCCcccceeccCCceEEEEEEcC--CCC--EEEEEEecCcccc-cccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP--DGK--VLAVKKIDSSHFQ-RANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNI 479 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~--~g~--~vavK~l~~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (495)
++|...+.||+|+||.||+|++. +++ .||||++...... ....+.|.+|++++.+++||||+++++++...+ .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 45777899999999999999863 333 6899998754322 123568999999999999999999999998765 78
Q ss_pred EEEEecCCCCHhhhh
Q 040888 480 LIYDYYRNGSLHEFL 494 (495)
Q Consensus 480 lv~ey~~~GsL~~~L 494 (495)
+|+||+++|+|.+++
T Consensus 97 ~v~e~~~~~~L~~~l 111 (291)
T 1u46_A 97 MVTELAPLGSLLDRL 111 (291)
T ss_dssp EEEECCTTCBHHHHH
T ss_pred eeEecccCCCHHHHH
Confidence 999999999998875
No 364
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=98.94 E-value=1.1e-09 Score=105.74 Aligned_cols=85 Identities=22% Similarity=0.378 Sum_probs=74.2
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|.. .+++.||||++..... .+.+.+|++.+.++ +|+|++++++++......++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 4577889999999999999996 5789999999865322 34578899999999 8999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+ +|+|.+++
T Consensus 86 e~~-~~~L~~~l 96 (298)
T 1csn_A 86 DLL-GPSLEDLL 96 (298)
T ss_dssp ECC-CCBHHHHH
T ss_pred Eec-CCCHHHHH
Confidence 999 99999876
No 365
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=98.92 E-value=1.5e-09 Score=109.92 Aligned_cols=80 Identities=29% Similarity=0.456 Sum_probs=62.4
Q ss_pred cceeccCCceEEEEEEcC---CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe--CCEEEEEEEe
Q 040888 410 GRLLGEGTIGRVYRAKYP---DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE--QGHNILIYDY 484 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ey 484 (495)
.++||+|+||.||+|... +++.||||++..... .+.+.+|++++.+++|||||++++++.. ....++||||
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~ 101 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 101 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEEC
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeC
Confidence 568999999999999974 578999999975432 3578899999999999999999999965 6688999999
Q ss_pred cCCCCHhhhh
Q 040888 485 YRNGSLHEFL 494 (495)
Q Consensus 485 ~~~GsL~~~L 494 (495)
++ |+|.+++
T Consensus 102 ~~-~~l~~~~ 110 (405)
T 3rgf_A 102 AE-HDLWHII 110 (405)
T ss_dssp CS-EEHHHHH
T ss_pred CC-CCHHHHH
Confidence 97 4776654
No 366
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=98.92 E-value=3.9e-10 Score=109.79 Aligned_cols=92 Identities=21% Similarity=0.361 Sum_probs=68.5
Q ss_pred hccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc----ccHHHHHHHHHHHhcC----CCCCcceEEEEEE
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR----ANSESFSEIVQNISRI----RHTNIAELVGFCS 473 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~----~~~~~f~~e~~~l~~l----~H~niv~l~g~~~ 473 (495)
..++|...+.||+|+||.||+|.. .+++.||||++....... .....+.+|++++.++ +||||+++++++.
T Consensus 29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 356788999999999999999987 468899999997543211 1123466788888888 8999999999999
Q ss_pred eCCEEEEEEEe-cCCCCHhhhh
Q 040888 474 EQGHNILIYDY-YRNGSLHEFL 494 (495)
Q Consensus 474 ~~~~~~lv~ey-~~~GsL~~~L 494 (495)
..+..++|+|| +++|+|.+++
T Consensus 109 ~~~~~~~v~e~~~~~~~L~~~l 130 (312)
T 2iwi_A 109 TQEGFMLVLERPLPAQDLFDYI 130 (312)
T ss_dssp ----CEEEEECCSSEEEHHHHH
T ss_pred cCCeEEEEEEecCCCCCHHHHH
Confidence 98889999999 8899998876
No 367
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=98.91 E-value=2.7e-09 Score=104.90 Aligned_cols=85 Identities=28% Similarity=0.473 Sum_probs=66.9
Q ss_pred ccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHH--HhcCCCCCcceEEEEEEe-----CC
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQN--ISRIRHTNIAELVGFCSE-----QG 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~--l~~l~H~niv~l~g~~~~-----~~ 476 (495)
.++|...+.||+|+||.||+|+. +++.||||++.... .+.+..|.++ +..++||||+++++++.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 35677889999999999999987 68899999986432 3345555544 455899999999987653 22
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++||||+++|+|.+++
T Consensus 86 ~~~lv~e~~~~g~L~~~l 103 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYL 103 (336)
T ss_dssp EEEEEECCCTTCBHHHHH
T ss_pred eEEEEEecCCCCcHHHHH
Confidence 568999999999999876
No 368
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=98.90 E-value=1.4e-09 Score=108.48 Aligned_cols=89 Identities=20% Similarity=0.275 Sum_probs=73.5
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC-----CE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ-----GH 477 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~-----~~ 477 (495)
.+.|...+.||+|+||.||+|... +++.||||++..... ....+.+.+|++++.+++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTC-HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccC-cHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 346888899999999999999874 688999999975332 22346789999999999999999999999764 36
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++|+||++ |+|.+++
T Consensus 105 ~~iv~e~~~-~~L~~~l 120 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLL 120 (364)
T ss_dssp EEEEEECCS-EEHHHHH
T ss_pred EEEEEcccC-cCHHHHH
Confidence 899999997 5888765
No 369
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=98.90 E-value=1.8e-09 Score=110.47 Aligned_cols=81 Identities=15% Similarity=0.199 Sum_probs=69.1
Q ss_pred cccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEEEecC
Q 040888 408 ATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 408 ~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~ 486 (495)
...+.||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +|||||++++++..++..++||||++
T Consensus 18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 3468899999999987666689999999986432 35678999999886 89999999999999999999999995
Q ss_pred CCCHhhhh
Q 040888 487 NGSLHEFL 494 (495)
Q Consensus 487 ~GsL~~~L 494 (495)
|+|.+++
T Consensus 93 -gsL~~~l 99 (434)
T 2rio_A 93 -LNLQDLV 99 (434)
T ss_dssp -EEHHHHH
T ss_pred -CCHHHHH
Confidence 6998876
No 370
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=98.90 E-value=1.2e-09 Score=107.18 Aligned_cols=87 Identities=26% Similarity=0.403 Sum_probs=71.4
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEe--------
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSE-------- 474 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~-------- 474 (495)
.+|...+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.++.+++ ||||+++++++..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE--EKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSH--HHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCch--HHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 4677889999999999999997 4689999999854322 23567899999999996 9999999999953
Q ss_pred CCEEEEEEEecCCCCHhhhh
Q 040888 475 QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 475 ~~~~~lv~ey~~~GsL~~~L 494 (495)
....++|+||++ |+|.+++
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l 124 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFL 124 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHH
T ss_pred CceEEEEEEecC-CCHHHHH
Confidence 334789999996 7888765
No 371
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=98.89 E-value=9.1e-10 Score=108.95 Aligned_cols=89 Identities=13% Similarity=0.138 Sum_probs=67.2
Q ss_pred cCCcccceeccCCceEEEEEEcC----CCCEEEEEEecCcccc---------cccHHHHHHHHHHHhcCCCCCcceEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP----DGKVLAVKKIDSSHFQ---------RANSESFSEIVQNISRIRHTNIAELVGF 471 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~---------~~~~~~f~~e~~~l~~l~H~niv~l~g~ 471 (495)
++|...+.||+|+||.||+|... .+..+|||+....... ....+.+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 45778899999999999999985 5778999998754211 0112457788999999999999999999
Q ss_pred EEe----CCEEEEEEEecCCCCHhhhh
Q 040888 472 CSE----QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 472 ~~~----~~~~~lv~ey~~~GsL~~~L 494 (495)
+.. ....++||||+ +|+|.+++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l 142 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKIS 142 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHC
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHH
Confidence 988 67889999999 99999876
No 372
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=98.88 E-value=2.7e-10 Score=121.36 Aligned_cols=89 Identities=21% Similarity=0.344 Sum_probs=73.9
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe------CCE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE------QGH 477 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~------~~~ 477 (495)
++|...+.||+|+||.||+|.. .+|+.||||++..... ....+.|.+|++++.+++|||||++++++.. .+.
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~-~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS-PKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCC-HHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 5688899999999999999998 4689999999875422 2335679999999999999999999999765 566
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+++|+|.+++
T Consensus 93 ~~LVmEy~~ggsL~~~L 109 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYL 109 (676)
T ss_dssp CCCEEECCSSCBHHHHH
T ss_pred EEEEEEeCCCCCHHHHH
Confidence 78999999999999876
No 373
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=98.88 E-value=1.8e-09 Score=107.16 Aligned_cols=88 Identities=23% Similarity=0.339 Sum_probs=62.2
Q ss_pred HHHHHhccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC
Q 040888 398 ADLLTATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG 476 (495)
Q Consensus 398 ~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (495)
.......++|...+.||+|+||.||+|... +|+.||||++..... ..+.+.+|++.+..++|||||+++++|...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~ 92 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---FRNRELQIMQDLAVLHHPNIVQLQSYFYTLG 92 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT---CCCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc---ccHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence 455667789999999999999999999984 689999999865432 2345678888899999999999999997643
Q ss_pred E-------EEEEEEecCCC
Q 040888 477 H-------NILIYDYYRNG 488 (495)
Q Consensus 477 ~-------~~lv~ey~~~G 488 (495)
. .++||||++++
T Consensus 93 ~~~~~~~~~~lv~e~~~~~ 111 (360)
T 3e3p_A 93 ERDRRDIYLNVVMEYVPDT 111 (360)
T ss_dssp SSCTTCEEEEEEEECCSCB
T ss_pred cccccceeEEEEeeccccc
Confidence 3 78999999864
No 374
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=98.88 E-value=2.4e-09 Score=104.21 Aligned_cols=87 Identities=16% Similarity=0.272 Sum_probs=63.1
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.++|...+.||+|+||.||+|... +|+.||||++..........+.+.++..++..++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356777899999999999999985 6899999999765332222334555556788899999999999999999999999
Q ss_pred EecCCCCHh
Q 040888 483 DYYRNGSLH 491 (495)
Q Consensus 483 ey~~~GsL~ 491 (495)
||+ ++.+.
T Consensus 104 e~~-~~~~~ 111 (318)
T 2dyl_A 104 ELM-GTCAE 111 (318)
T ss_dssp CCC-SEEHH
T ss_pred ecc-CCcHH
Confidence 999 34443
No 375
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=98.87 E-value=7.3e-10 Score=109.93 Aligned_cols=82 Identities=13% Similarity=0.130 Sum_probs=69.0
Q ss_pred cCCcccceeccCCceEEEEEEcC---------CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcce--------
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP---------DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAE-------- 467 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~---------~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~-------- 467 (495)
++|...+.||+|+||.||+|+.. +++.||||.+... +.+.+|++++.+++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 46778899999999999999985 3789999998643 35789999999999999998
Q ss_pred -------EEEEEEe-CCEEEEEEEecCCCCHhhhh
Q 040888 468 -------LVGFCSE-QGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 468 -------l~g~~~~-~~~~~lv~ey~~~GsL~~~L 494 (495)
+++++.. ++..++||||+ +|+|.+++
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l 148 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSAL 148 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHH
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHH
Confidence 6788877 67889999999 99999886
No 376
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=98.87 E-value=3.5e-09 Score=104.38 Aligned_cols=85 Identities=18% Similarity=0.263 Sum_probs=66.1
Q ss_pred ccCCcc-cceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe----CCE
Q 040888 404 TANFAT-GRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE----QGH 477 (495)
Q Consensus 404 t~~f~~-~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~----~~~ 477 (495)
.++|.. .++||+|+||.||+|... +|+.||||++.... +...+....+..++||||+++++++.. ...
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP------KARQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH------HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 456766 457999999999999985 69999999986431 122222334667799999999999976 445
Q ss_pred EEEEEEecCCCCHhhhh
Q 040888 478 NILIYDYYRNGSLHEFL 494 (495)
Q Consensus 478 ~~lv~ey~~~GsL~~~L 494 (495)
.++||||+++|+|.+++
T Consensus 101 ~~lv~e~~~gg~L~~~l 117 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRI 117 (336)
T ss_dssp EEEEEECCTTEEHHHHH
T ss_pred EEEEEeccCCCCHHHHH
Confidence 78999999999999876
No 377
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=98.86 E-value=1.7e-09 Score=107.88 Aligned_cols=90 Identities=17% Similarity=0.218 Sum_probs=68.9
Q ss_pred ccCCcccceeccCCceEEEEEEcCC------CCEEEEEEecCccccc---------ccHHHHHHHHHHHhcCCCCCcceE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYPD------GKVLAVKKIDSSHFQR---------ANSESFSEIVQNISRIRHTNIAEL 468 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~---------~~~~~f~~e~~~l~~l~H~niv~l 468 (495)
.++|...+.||+|+||.||+|.+.. ++.||||++....... .....+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578888999999999999998854 4789999986543110 011234556677888999999999
Q ss_pred EEEEEeC----CEEEEEEEecCCCCHhhhh
Q 040888 469 VGFCSEQ----GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 469 ~g~~~~~----~~~~lv~ey~~~GsL~~~L 494 (495)
++++... ...++||||+ +|+|.+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~ 142 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIY 142 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHH
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHH
Confidence 9999774 4578999999 99999876
No 378
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=98.84 E-value=3.1e-09 Score=108.51 Aligned_cols=84 Identities=20% Similarity=0.305 Sum_probs=70.0
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~e 483 (495)
.+|...+.||+|+||+||.....+++.||||++..... +.+.+|++++.++ +|||||++++++...+..++|||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 35777899999999996655555789999999975432 2356799999999 89999999999999999999999
Q ss_pred ecCCCCHhhhh
Q 040888 484 YYRNGSLHEFL 494 (495)
Q Consensus 484 y~~~GsL~~~L 494 (495)
|++ |+|.+++
T Consensus 99 ~~~-g~L~~~l 108 (432)
T 3p23_A 99 LCA-ATLQEYV 108 (432)
T ss_dssp CCS-EEHHHHH
T ss_pred CCC-CCHHHHH
Confidence 996 6898875
No 379
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=98.82 E-value=3.5e-09 Score=111.20 Aligned_cols=87 Identities=10% Similarity=0.186 Sum_probs=62.8
Q ss_pred cccceeccCCceEEEEEEcCCCCEEEEEEecCccccc------ccHHHHHHHHHHHhcCCCCCcceEEEEEEeCCEEEEE
Q 040888 408 ATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQR------ANSESFSEIVQNISRIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 408 ~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (495)
...+.||+|+||.||+|.. .+..+++|+........ ...+.|.+|++++.+++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467899999999999955 56788999865432211 1134589999999999999999777777788888999
Q ss_pred EEecCCCCHhhhhC
Q 040888 482 YDYYRNGSLHEFLH 495 (495)
Q Consensus 482 ~ey~~~GsL~~~L~ 495 (495)
|||+++|+|.++++
T Consensus 418 mE~~~ggsL~~~l~ 431 (540)
T 3en9_A 418 MSYINGKLAKDVIE 431 (540)
T ss_dssp EECCCSEEHHHHST
T ss_pred EECCCCCCHHHHHH
Confidence 99999999999874
No 380
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=98.82 E-value=2.9e-09 Score=106.38 Aligned_cols=88 Identities=14% Similarity=0.061 Sum_probs=59.1
Q ss_pred cCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccc-cccHHHHHHHH---HHHhcCCCCCcceEE-------EEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQ-RANSESFSEIV---QNISRIRHTNIAELV-------GFC 472 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~f~~e~---~~l~~l~H~niv~l~-------g~~ 472 (495)
.+|...+.||+|+||.||+|... +|+.||||++...... ....+.+.+|+ +.+++ +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 34777899999999999999974 6899999999875432 22345677784 55556 799988755 455
Q ss_pred EeC-----------------CEEEEEEEecCCCCHhhhh
Q 040888 473 SEQ-----------------GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 473 ~~~-----------------~~~~lv~ey~~~GsL~~~L 494 (495)
... ...++|||||+ |+|.+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l 178 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLF 178 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHH
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHH
Confidence 433 23799999999 8999886
No 381
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=98.82 E-value=2e-09 Score=109.53 Aligned_cols=80 Identities=25% Similarity=0.435 Sum_probs=64.5
Q ss_pred CCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeC----C--EE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQ----G--HN 478 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~----~--~~ 478 (495)
.|...+.||+|+||.||+|+.. +|+.||||++.... +.+.+|++++++++|||||+++++|... + ..
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 5777899999999999999985 59999999986532 1234799999999999999999998652 2 35
Q ss_pred EEEEEecCCCCHhh
Q 040888 479 ILIYDYYRNGSLHE 492 (495)
Q Consensus 479 ~lv~ey~~~GsL~~ 492 (495)
++||||+++ +|.+
T Consensus 129 ~lv~e~~~~-~l~~ 141 (420)
T 1j1b_A 129 NLVLDYVPE-TVYR 141 (420)
T ss_dssp EEEEECCCE-EHHH
T ss_pred Eeehhcccc-cHHH
Confidence 689999986 5544
No 382
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=98.82 E-value=2.2e-09 Score=105.00 Aligned_cols=92 Identities=20% Similarity=0.396 Sum_probs=75.7
Q ss_pred hccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccccc----ccHHHHHHHHHHHhcCC--CCCcceEEEEEEeC
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQR----ANSESFSEIVQNISRIR--HTNIAELVGFCSEQ 475 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~----~~~~~f~~e~~~l~~l~--H~niv~l~g~~~~~ 475 (495)
..++|...+.||+|+||.||+|.. .+++.||||.+....... ...+.+.+|++++.+++ |+||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 345688899999999999999986 568899999997653221 11245778999999996 59999999999999
Q ss_pred CEEEEEEEecCC-CCHhhhh
Q 040888 476 GHNILIYDYYRN-GSLHEFL 494 (495)
Q Consensus 476 ~~~~lv~ey~~~-GsL~~~L 494 (495)
+..++|+||+.+ |+|.+++
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l 140 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFI 140 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHH
T ss_pred CcEEEEEEcCCCCccHHHHH
Confidence 999999999986 8898875
No 383
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=98.81 E-value=7.9e-09 Score=105.43 Aligned_cols=87 Identities=14% Similarity=0.270 Sum_probs=72.4
Q ss_pred ccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcC------CCCCcceEEEEEEeCC
Q 040888 404 TANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRI------RHTNIAELVGFCSEQG 476 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l------~H~niv~l~g~~~~~~ 476 (495)
...|...+.||+|+||.||+|... +++.||||++.... ...+.+.+|++++..+ .|+||+++++++...+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc---chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 346788899999999999999874 58899999997542 2245677888888776 5779999999999999
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++||||++ |+|.+++
T Consensus 173 ~~~lv~e~~~-~~L~~~l 189 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELI 189 (429)
T ss_dssp EEEEEECCCC-CBHHHHH
T ss_pred eEEEEEeccC-CCHHHHH
Confidence 9999999996 6888765
No 384
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.81 E-value=2.9e-10 Score=120.79 Aligned_cols=153 Identities=14% Similarity=0.143 Sum_probs=77.3
Q ss_pred CCEeEEEcCCCCCccc-cccccCCCCCCcEEECcC---------CCCCCCCCCCC---CCCCcEEECcCCcCCCCcchhc
Q 040888 69 SSVTEIKLSGLGLNGQ-LGYQLTNLKSVSYLDVSN---------NNLKDSIPYQL---PPNLKHLDLSENQFSGTVPYSI 135 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~-~~~~~~~l~~L~~L~Ls~---------N~l~g~~p~~~---~~~L~~L~Ls~N~l~g~~p~~~ 135 (495)
.+++.|+|.+| +... ++.....+++|+.|+|+. |.+++.....+ .++|+.|+++.|++++..+..+
T Consensus 314 ~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l 392 (594)
T 2p1m_B 314 PKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392 (594)
T ss_dssp TTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHH
T ss_pred CCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHH
Confidence 56777777776 3322 222233466777777632 33332111111 1566666666666665544444
Q ss_pred c-CCCCCcEEEcc--c----CcCCC-----ccchhhhCCCCCcEEEccCCcCCCcCcccccC-CCCCCEEeccCCccccc
Q 040888 136 S-QMSELKYLNLG--S----NQLNG-----QLSDMFQKNEKLETLDLSKNQLTGELPRSFAS-LSSLKKLYLQNNQFTGS 202 (495)
Q Consensus 136 ~-~l~~L~~L~L~--~----N~l~g-----~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-l~~L~~L~l~~N~l~g~ 202 (495)
. .+++|+.|+|+ + |.+++ .++..+..+++|+.|+|++ ++++..+..+.. +++|+.|+|++|.+++.
T Consensus 393 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~ 471 (594)
T 2p1m_B 393 ARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDL 471 (594)
T ss_dssp HHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHH
T ss_pred HhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHH
Confidence 3 36666666666 3 44442 1222345555666666654 454444444443 55566666666665443
Q ss_pred c-ccc-CCcc-CcEEEeecCCCcc
Q 040888 203 I-NVL-GKLP-LDELNVENNKFSG 223 (495)
Q Consensus 203 ~-~~~-~~~~-L~~l~l~~N~l~g 223 (495)
. ..+ ..++ |+.|++++|.+++
T Consensus 472 ~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 472 GMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCSCCH
T ss_pred HHHHHHhcCCCcCEEECcCCCCcH
Confidence 2 111 2233 5666666666543
No 385
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.80 E-value=2.1e-11 Score=115.36 Aligned_cols=64 Identities=34% Similarity=0.557 Sum_probs=32.7
Q ss_pred cCCCCCcEEEcccCcCCC--ccchhhhCCCCCcEEEccCCcCCCcCcccccCCC--CCCEEeccCCcccc
Q 040888 136 SQMSELKYLNLGSNQLNG--QLSDMFQKNEKLETLDLSKNQLTGELPRSFASLS--SLKKLYLQNNQFTG 201 (495)
Q Consensus 136 ~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~--~L~~L~l~~N~l~g 201 (495)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc
Confidence 345566666666666655 3445555555666666666665543 1222222 44455544444443
No 386
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=98.79 E-value=4.1e-09 Score=105.94 Aligned_cols=86 Identities=16% Similarity=0.280 Sum_probs=70.3
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC--------CCCcceEEEEEE--
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR--------HTNIAELVGFCS-- 473 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~--------H~niv~l~g~~~-- 473 (495)
++|...+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++.+++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE---HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC---cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 5688889999999999999986 568899999997542 23567889999999986 788999999997
Q ss_pred --eCCEEEEEEEecCCCCHhhhh
Q 040888 474 --EQGHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 474 --~~~~~~lv~ey~~~GsL~~~L 494 (495)
.....++||||+ +|+|.+++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~ 135 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWI 135 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHH
Confidence 445789999999 56666543
No 387
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=98.79 E-value=5.5e-09 Score=102.43 Aligned_cols=86 Identities=21% Similarity=0.403 Sum_probs=72.8
Q ss_pred cCCcccceeccCCceEEEEEEc--CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCC------cceEEEEEEeCC
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY--PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTN------IAELVGFCSEQG 476 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~n------iv~l~g~~~~~~ 476 (495)
++|...+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++..++|++ ++++++++...+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD---RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH---HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC---chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 4677889999999999999986 368899999997532 22467889999998887665 999999999999
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++||||+ +|+|.+++
T Consensus 91 ~~~lv~e~~-~~~l~~~l 107 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFI 107 (339)
T ss_dssp EEEEEEECC-CCBHHHHH
T ss_pred cEEEEEcCC-CCCHHHHH
Confidence 999999999 88998875
No 388
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=98.79 E-value=7.4e-09 Score=99.63 Aligned_cols=86 Identities=16% Similarity=0.298 Sum_probs=71.8
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEE-EeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFC-SEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~-~~~~~~~lv 481 (495)
.++|...+.||+|+||.||+|+. .+++.||||++..... .+.+.+|++++.+++|++++..+.+| ...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence 45688889999999999999997 5789999999865432 34688999999999999887766666 556778999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+ +|+|.+++
T Consensus 84 ~e~~-~~~L~~~~ 95 (296)
T 3uzp_A 84 MELL-GPSLEDLF 95 (296)
T ss_dssp EECC-CCBHHHHH
T ss_pred EEec-CCCHHHHH
Confidence 9999 89999876
No 389
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=98.77 E-value=4.8e-09 Score=105.81 Aligned_cols=80 Identities=21% Similarity=0.404 Sum_probs=64.6
Q ss_pred cCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEeCC------EE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSEQG------HN 478 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------~~ 478 (495)
..|...+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++|||||+++++|...+ ..
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 35777899999999999999997766799998864321 1236899999999999999999997643 27
Q ss_pred EEEEEecCCCCH
Q 040888 479 ILIYDYYRNGSL 490 (495)
Q Consensus 479 ~lv~ey~~~GsL 490 (495)
++||||++++.+
T Consensus 114 ~lv~e~~~~~l~ 125 (394)
T 4e7w_A 114 NLVLEYVPETVY 125 (394)
T ss_dssp EEEEECCSEEHH
T ss_pred EEEeeccCccHH
Confidence 899999987533
No 390
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=98.75 E-value=9.7e-09 Score=98.73 Aligned_cols=86 Identities=16% Similarity=0.298 Sum_probs=68.8
Q ss_pred ccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEE-EeCCEEEEE
Q 040888 404 TANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFC-SEQGHNILI 481 (495)
Q Consensus 404 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~-~~~~~~~lv 481 (495)
.++|...+.||+|+||.||+|+. .+++.||||.+..... .+.+.+|++++.+++|++++..+++| ...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 46788899999999999999997 5688999998755322 23578899999999998888777776 566788999
Q ss_pred EEecCCCCHhhhh
Q 040888 482 YDYYRNGSLHEFL 494 (495)
Q Consensus 482 ~ey~~~GsL~~~L 494 (495)
|||+ +|+|.+++
T Consensus 84 ~e~~-~~~L~~~~ 95 (296)
T 4hgt_A 84 MELL-GPSLEDLF 95 (296)
T ss_dssp EECC-CCBHHHHH
T ss_pred EEcc-CCCHHHHH
Confidence 9999 99998875
No 391
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.73 E-value=1.9e-09 Score=114.39 Aligned_cols=105 Identities=20% Similarity=0.246 Sum_probs=64.3
Q ss_pred CCEeEEEcCCCCCccccccccC-CCCCCcEEECcCC-CCCCC-CCCCC--CCCCcEEECcCCcCCCCcchhcc----CCC
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLT-NLKSVSYLDVSNN-NLKDS-IPYQL--PPNLKHLDLSENQFSGTVPYSIS----QMS 139 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~-~l~~L~~L~Ls~N-~l~g~-~p~~~--~~~L~~L~Ls~N~l~g~~p~~~~----~l~ 139 (495)
.+++.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++... .++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 5788888888888776666554 5777888888777 44321 11111 26777777777777665444333 556
Q ss_pred CCcEEEcccCc--CCC-ccchhhhCCCCCcEEEccCC
Q 040888 140 ELKYLNLGSNQ--LNG-QLSDMFQKNEKLETLDLSKN 173 (495)
Q Consensus 140 ~L~~L~L~~N~--l~g-~~p~~~~~l~~L~~L~ls~N 173 (495)
+|+.|+|++|. ++. .++..+..+++|+.|+|++|
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 77777777775 221 12222344567777777766
No 392
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=98.72 E-value=1.8e-08 Score=104.15 Aligned_cols=85 Identities=21% Similarity=0.321 Sum_probs=70.2
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCC-CCcceEEEEEEeCCEEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRH-TNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H-~niv~l~g~~~~~~~~~lv~ 482 (495)
++|...+.||+|+||.||+|+. .+++.||||++..... .+++.+|++++..++| ++++.+..++...+..++||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 5688889999999999999997 5699999998765432 2357889999999987 55556666677788899999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||+ +|+|.+++
T Consensus 83 e~~-g~sL~~ll 93 (483)
T 3sv0_A 83 DLL-GPSLEDLF 93 (483)
T ss_dssp ECC-CCBHHHHH
T ss_pred ECC-CCCHHHHH
Confidence 999 99999876
No 393
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=98.71 E-value=7.7e-09 Score=103.07 Aligned_cols=86 Identities=20% Similarity=0.384 Sum_probs=72.0
Q ss_pred cCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-----------CCCcceEEEEE
Q 040888 405 ANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-----------HTNIAELVGFC 472 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-----------H~niv~l~g~~ 472 (495)
++|...+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++.+++ |+||+++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK---VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc---cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 4677789999999999999997 568999999997542 22467889999998886 89999999999
Q ss_pred EeCC----EEEEEEEecCCCCHhhhh
Q 040888 473 SEQG----HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 473 ~~~~----~~~lv~ey~~~GsL~~~L 494 (495)
...+ ..++||||+ +|+|.+++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~ 120 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALI 120 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHH
T ss_pred hccCCCCceEEEEEecC-CCCHHHHH
Confidence 8654 678999999 88998875
No 394
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=98.70 E-value=2.2e-08 Score=96.15 Aligned_cols=91 Identities=15% Similarity=0.132 Sum_probs=67.8
Q ss_pred HHHHHhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCccccc----------------ccHHHHHHHHHHHhcCC
Q 040888 398 ADLLTATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQR----------------ANSESFSEIVQNISRIR 461 (495)
Q Consensus 398 ~~~~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~----------------~~~~~f~~e~~~l~~l~ 461 (495)
..+......|...+.||+|+||.||+|...+|+.||||.++...... .....+.+|++++.+++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 33444445566779999999999999999779999999997542210 12456899999999999
Q ss_pred CCCcceEEEEEEeCCEEEEEEEecCCCCHhh
Q 040888 462 HTNIAELVGFCSEQGHNILIYDYYRNGSLHE 492 (495)
Q Consensus 462 H~niv~l~g~~~~~~~~~lv~ey~~~GsL~~ 492 (495)
| +++.+++.. +..++|||||++|+|.+
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~ 189 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR 189 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH
Confidence 4 666665544 44589999999999987
No 395
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=98.68 E-value=2.4e-08 Score=100.21 Aligned_cols=88 Identities=20% Similarity=0.284 Sum_probs=72.9
Q ss_pred hccCCcccceeccCCceEEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CC-----CcceEEEEEEeC
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HT-----NIAELVGFCSEQ 475 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~-----niv~l~g~~~~~ 475 (495)
..++|...+.||+|+||.||+|... +++.||||++.... ...+++..|++++..++ |+ +++++.+++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK---AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH---HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH---HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 3567888999999999999999874 68899999997532 22456788888888875 55 499999999999
Q ss_pred CEEEEEEEecCCCCHhhhh
Q 040888 476 GHNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 476 ~~~~lv~ey~~~GsL~~~L 494 (495)
+..++||||++ |+|.+++
T Consensus 129 ~~~~lv~e~~~-~~L~~~l 146 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLL 146 (382)
T ss_dssp TEEEEEEECCC-CBHHHHH
T ss_pred CceEEEEecCC-CCHHHHH
Confidence 99999999996 5998875
No 396
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=98.64 E-value=2.9e-08 Score=97.95 Aligned_cols=86 Identities=21% Similarity=0.332 Sum_probs=71.1
Q ss_pred cCCcccceeccCCceEEEEEEcC-CC-CEEEEEEecCcccccccHHHHHHHHHHHhcCCCCC------cceEEEEEEeCC
Q 040888 405 ANFATGRLLGEGTIGRVYRAKYP-DG-KVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTN------IAELVGFCSEQG 476 (495)
Q Consensus 405 ~~f~~~~~iG~G~~g~Vy~~~~~-~g-~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~n------iv~l~g~~~~~~ 476 (495)
++|...+.||+|+||.||+|... ++ +.||||+++... ...+.+.+|++++.+++|++ ++.+.+++...+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG---KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc---cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 46788899999999999999874 34 689999997532 23467889999999998776 999999999999
Q ss_pred EEEEEEEecCCCCHhhhh
Q 040888 477 HNILIYDYYRNGSLHEFL 494 (495)
Q Consensus 477 ~~~lv~ey~~~GsL~~~L 494 (495)
..++||||+ +|++.+++
T Consensus 96 ~~~lv~e~~-~~~l~~~l 112 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFL 112 (355)
T ss_dssp EEEEEEECC-CCBHHHHH
T ss_pred eEEEEEecc-CCChHHHH
Confidence 999999999 56776654
No 397
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.63 E-value=2.5e-09 Score=95.99 Aligned_cols=114 Identities=18% Similarity=0.207 Sum_probs=54.7
Q ss_pred ccccCCCCCCcEEECcCC-CCCCC----CCCCC--CCCCcEEECcCCcCCCC----cchhccCCCCCcEEEcccCcCCCc
Q 040888 86 GYQLTNLKSVSYLDVSNN-NLKDS----IPYQL--PPNLKHLDLSENQFSGT----VPYSISQMSELKYLNLGSNQLNGQ 154 (495)
Q Consensus 86 ~~~~~~l~~L~~L~Ls~N-~l~g~----~p~~~--~~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~ 154 (495)
...+...+.|++|+|++| .+... +...+ .++|++|+|++|.|... +...+...++|++|+|++|.|+..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 344555566666666665 55421 00001 14455555555555421 223333445556666666655532
Q ss_pred ----cchhhhCCCCCcEEEc--cCCcCCCc----CcccccCCCCCCEEeccCCcc
Q 040888 155 ----LSDMFQKNEKLETLDL--SKNQLTGE----LPRSFASLSSLKKLYLQNNQF 199 (495)
Q Consensus 155 ----~p~~~~~l~~L~~L~l--s~N~l~g~----~p~~~~~l~~L~~L~l~~N~l 199 (495)
+...+...++|++|+| ++|.++.. +...+...++|+.|+|++|.+
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2344444555666666 55555432 222333445555555555554
No 398
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.61 E-value=2e-08 Score=99.67 Aligned_cols=161 Identities=19% Similarity=0.238 Sum_probs=103.8
Q ss_pred CCEeEEEcCCCCC---------ccccccccCCCCCCcEEECcCCCCCCCCCCCCCCCCcEEECcCCcCCCCcchhcc--C
Q 040888 69 SSVTEIKLSGLGL---------NGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQLPPNLKHLDLSENQFSGTVPYSIS--Q 137 (495)
Q Consensus 69 ~~v~~l~L~~n~l---------~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~--~ 137 (495)
++++.|.+.++.. .+.++..+..+++|+.|+|++|.-. .++..-.++|+.|+|..|.++......+. .
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~~~~~~L~~L~L~~~~l~~~~l~~l~~~~ 217 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGKKPRPNLKSLEIISGGLPDSVVEDILGSD 217 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCSCBCTTCSEEEEECSBCCHHHHHHHHHSB
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eeccccCCCCcEEEEecCCCChHHHHHHHHcc
Confidence 5788888866543 1235556677889999999887311 23331237899999998887754444444 6
Q ss_pred CCCCcEEEccc--CcCCCc-----cchhh--hCCCCCcEEEccCCcCCCcCccccc---CCCCCCEEeccCCcccccc--
Q 040888 138 MSELKYLNLGS--NQLNGQ-----LSDMF--QKNEKLETLDLSKNQLTGELPRSFA---SLSSLKKLYLQNNQFTGSI-- 203 (495)
Q Consensus 138 l~~L~~L~L~~--N~l~g~-----~p~~~--~~l~~L~~L~ls~N~l~g~~p~~~~---~l~~L~~L~l~~N~l~g~~-- 203 (495)
+++|+.|+|+. |...|. +...+ ..+++|++|+|++|.+++..+..+. .+++|++|+|+.|.+++.-
T Consensus 218 lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~ 297 (362)
T 2ra8_A 218 LPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGAR 297 (362)
T ss_dssp CTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHH
T ss_pred CCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHH
Confidence 88999998863 222221 11122 2468899999999988754443333 4778999999999887632
Q ss_pred ---cccCCcc-CcEEEeecCCCcccCchhhh
Q 040888 204 ---NVLGKLP-LDELNVENNKFSGWVPEELK 230 (495)
Q Consensus 204 ---~~~~~~~-L~~l~l~~N~l~g~~p~~l~ 230 (495)
..+..++ |+.|++++|.++...-..+.
T Consensus 298 ~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~ 328 (362)
T 2ra8_A 298 LLLDHVDKIKHLKFINMKYNYLSDEMKKELQ 328 (362)
T ss_dssp HHHTTHHHHTTCSEEECCSBBCCHHHHHHHH
T ss_pred HHHhhcccCCcceEEECCCCcCCHHHHHHHH
Confidence 2222334 89999999987754333333
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.56 E-value=5.2e-08 Score=92.06 Aligned_cols=77 Identities=30% Similarity=0.389 Sum_probs=65.2
Q ss_pred CCCcEEECcCCcCCC--CcchhccCCCCCcEEEcccCcCCCccchhhhCCC--CCcEEEccCCcCCCcCcc-------cc
Q 040888 115 PNLKHLDLSENQFSG--TVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNE--KLETLDLSKNQLTGELPR-------SF 183 (495)
Q Consensus 115 ~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~--~L~~L~ls~N~l~g~~p~-------~~ 183 (495)
++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|. .+
T Consensus 170 ~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il 247 (267)
T 3rw6_A 170 PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIR 247 (267)
T ss_dssp TTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHH
T ss_pred CCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHH
Confidence 699999999999998 5667888999999999999999976 3344444 999999999999987773 36
Q ss_pred cCCCCCCEEe
Q 040888 184 ASLSSLKKLY 193 (495)
Q Consensus 184 ~~l~~L~~L~ 193 (495)
..+++|+.||
T Consensus 248 ~~~P~L~~LD 257 (267)
T 3rw6_A 248 ERFPKLLRLD 257 (267)
T ss_dssp HHCTTCCEES
T ss_pred HHCcccCeEC
Confidence 7889999886
No 400
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.54 E-value=1.5e-08 Score=90.79 Aligned_cols=109 Identities=19% Similarity=0.279 Sum_probs=87.6
Q ss_pred CCCEeEEEcCCC-CCccc----cccccCCCCCCcEEECcCCCCCCCCC----CCCC--CCCcEEECcCCcCCCC----cc
Q 040888 68 GSSVTEIKLSGL-GLNGQ----LGYQLTNLKSVSYLDVSNNNLKDSIP----YQLP--PNLKHLDLSENQFSGT----VP 132 (495)
Q Consensus 68 ~~~v~~l~L~~n-~l~g~----~~~~~~~l~~L~~L~Ls~N~l~g~~p----~~~~--~~L~~L~Ls~N~l~g~----~p 132 (495)
...++.|+|++| .+... +...+...++|++|||++|.+...-. ..+. ++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 368999999999 88753 55677888999999999999974211 1111 6899999999999854 45
Q ss_pred hhccCCCCCcEEEc--ccCcCCCc----cchhhhCCCCCcEEEccCCcCC
Q 040888 133 YSISQMSELKYLNL--GSNQLNGQ----LSDMFQKNEKLETLDLSKNQLT 176 (495)
Q Consensus 133 ~~~~~l~~L~~L~L--~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~ 176 (495)
..+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 66788899999999 88999854 4566777799999999999985
No 401
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.48 E-value=7.1e-07 Score=89.93 Aligned_cols=144 Identities=15% Similarity=0.169 Sum_probs=83.8
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCC-CCCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIP-YQLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
.+++.|+|.+|+++..-...|. +++|+.++|..+ +. .|+ ..+. ++|+.++|..| ++..-...|.+ .+|+.+.
T Consensus 180 ~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~ 254 (401)
T 4fdw_A 180 YNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVK 254 (401)
T ss_dssp TTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEE
T ss_pred ccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEE
Confidence 5788888888888765555555 577888888744 44 233 2222 56777777764 44333344444 5666666
Q ss_pred cccCcCCCccchhhhCCCCCcEEEccCCcCC-----CcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeec
Q 040888 146 LGSNQLNGQLSDMFQKNEKLETLDLSKNQLT-----GELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVEN 218 (495)
Q Consensus 146 L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~-----g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~ 218 (495)
| .|.++..-+..|.++.+|+.+++.+|.+. ..-+..|.+|++|+.++|.+ .++... ..+..+. |+.+++..
T Consensus 255 l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~ 332 (401)
T 4fdw_A 255 L-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPA 332 (401)
T ss_dssp E-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECT
T ss_pred e-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECc
Confidence 6 34455444556666667777776666554 23344566666677766663 343322 3344433 66666644
Q ss_pred C
Q 040888 219 N 219 (495)
Q Consensus 219 N 219 (495)
|
T Consensus 333 ~ 333 (401)
T 4fdw_A 333 N 333 (401)
T ss_dssp T
T ss_pred c
Confidence 3
No 402
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.42 E-value=1.5e-06 Score=87.50 Aligned_cols=124 Identities=17% Similarity=0.226 Sum_probs=66.7
Q ss_pred EeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCC-CCC-CCCcEEECcCCcCCCCcchhccCCCCCcEEEccc
Q 040888 71 VTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPY-QLP-PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGS 148 (495)
Q Consensus 71 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 148 (495)
++.|.|.+ .+...-+..|.+|++|+.++|+.|+++. +|. .+. .+|+.+.|..| ++..-...|.++.+|+.++|..
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~-I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITK-LPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSE-ECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceE-echhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 55555553 4444444556666666666666666552 222 222 56666666533 4434444566666666666665
Q ss_pred CcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCccc
Q 040888 149 NQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFT 200 (495)
Q Consensus 149 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 200 (495)
| ++..-..+|.+ .+|+.+.| .|.++..-+..|.+|++|+.+++.+|.+.
T Consensus 236 ~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 236 N-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp T-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred C-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 3 34333344544 55666666 34454444556666666666666666554
No 403
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.38 E-value=4.4e-08 Score=97.21 Aligned_cols=149 Identities=22% Similarity=0.311 Sum_probs=102.0
Q ss_pred CCCEeEEEcCCCC-CccccccccCCCCCCcEEECcCCCCCCCCCCC----CCCCCcEEECcC--CcCCCC-----cchhc
Q 040888 68 GSSVTEIKLSGLG-LNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQ----LPPNLKHLDLSE--NQFSGT-----VPYSI 135 (495)
Q Consensus 68 ~~~v~~l~L~~n~-l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~----~~~~L~~L~Ls~--N~l~g~-----~p~~~ 135 (495)
.++++.|+|.++. + .++. +. +++|+.|+|..+.++...... -.|+|+.|+|+. |...|. +...+
T Consensus 171 ~P~L~~L~L~g~~~l--~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL--SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp CTTCCEEEEECCBTC--BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred CCCCcEEEEeCCCCc--eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 3689999998873 2 2333 43 889999999998876432111 137999999863 332222 11122
Q ss_pred --cCCCCCcEEEcccCcCCCccchhhh---CCCCCcEEEccCCcCCCc----CcccccCCCCCCEEeccCCcccccc-cc
Q 040888 136 --SQMSELKYLNLGSNQLNGQLSDMFQ---KNEKLETLDLSKNQLTGE----LPRSFASLSSLKKLYLQNNQFTGSI-NV 205 (495)
Q Consensus 136 --~~l~~L~~L~L~~N~l~g~~p~~~~---~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~-~~ 205 (495)
..+++|++|+|++|.+++..+..+. .+++|++|+|+.|.|++. ++..+.++++|+.|+|++|.++... ..
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~ 326 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKE 326 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHH
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHH
Confidence 3579999999999999865544443 477899999999999874 4445567899999999999987543 22
Q ss_pred cCCccCcEEEeecCC
Q 040888 206 LGKLPLDELNVENNK 220 (495)
Q Consensus 206 ~~~~~L~~l~l~~N~ 220 (495)
+...-...+++++|.
T Consensus 327 l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 327 LQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHHCCSEEECCSBC
T ss_pred HHHHcCCEEEecCCc
Confidence 222002467888776
No 404
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.35 E-value=2.5e-07 Score=97.62 Aligned_cols=82 Identities=10% Similarity=0.020 Sum_probs=58.9
Q ss_pred eccCCceEEEEEEc-CCCCEEEEEEecCcccc--------cccHHHHHHHHHHHhcC-CCCCcceEEEEEEeCCEEEEEE
Q 040888 413 LGEGTIGRVYRAKY-PDGKVLAVKKIDSSHFQ--------RANSESFSEIVQNISRI-RHTNIAELVGFCSEQGHNILIY 482 (495)
Q Consensus 413 iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--------~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (495)
.+.|..|.++++.. -.|+.+|||.+...... ....++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 44555554444332 24788999999754211 11246799999999999 7999999999999999999999
Q ss_pred EecCCCCHhhhh
Q 040888 483 DYYRNGSLHEFL 494 (495)
Q Consensus 483 ey~~~GsL~~~L 494 (495)
||++||+|.++|
T Consensus 322 Eyv~G~~L~d~i 333 (569)
T 4azs_A 322 EKLPGRLLSDML 333 (569)
T ss_dssp ECCCSEEHHHHH
T ss_pred ecCCCCcHHHHH
Confidence 999999999986
No 405
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.00 E-value=1.1e-06 Score=87.16 Aligned_cols=85 Identities=8% Similarity=0.135 Sum_probs=56.0
Q ss_pred CcccceeccCCceEEEEEEcCCCCEEEEEEecCcccc------------cccHHHH--------HHHHHHHhcCCCCCcc
Q 040888 407 FATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQ------------RANSESF--------SEIVQNISRIRHTNIA 466 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~------------~~~~~~f--------~~e~~~l~~l~H~niv 466 (495)
|.....||+|+||.||+|..++|+.||||.++..... ....... .+|...|.++.+..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7788999999999999999999999999987643210 0001112 2455666666544443
Q ss_pred eEEEEEEeCCEEEEEEEecCCCCHhhh
Q 040888 467 ELVGFCSEQGHNILIYDYYRNGSLHEF 493 (495)
Q Consensus 467 ~l~g~~~~~~~~~lv~ey~~~GsL~~~ 493 (495)
....+.... .++||||++++.|.++
T Consensus 177 vp~p~~~~~--~~LVME~i~G~~L~~l 201 (397)
T 4gyi_A 177 VPEPIAQSR--HTIVMSLVDALPMRQV 201 (397)
T ss_dssp CCCEEEEET--TEEEEECCSCEEGGGC
T ss_pred CCeeeeccC--ceEEEEecCCccHhhh
Confidence 222222222 2699999999888664
No 406
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=98.00 E-value=2.3e-06 Score=80.74 Aligned_cols=76 Identities=20% Similarity=0.246 Sum_probs=54.5
Q ss_pred CcccceeccCCceEEEEEEc-CCCCE--EEEEEecCccccc----------------------ccHHHHHHHHHHHhcCC
Q 040888 407 FATGRLLGEGTIGRVYRAKY-PDGKV--LAVKKIDSSHFQR----------------------ANSESFSEIVQNISRIR 461 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~-~~g~~--vavK~l~~~~~~~----------------------~~~~~f~~e~~~l~~l~ 461 (495)
|...+.||+|+||.||+|.. .+|+. ||||.++...... .....+.+|++.+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45568899999999999998 68888 9999875431110 01136889999999998
Q ss_pred CCCc--ceEEEEEEeCCEEEEEEEecC
Q 040888 462 HTNI--AELVGFCSEQGHNILIYDYYR 486 (495)
Q Consensus 462 H~ni--v~l~g~~~~~~~~~lv~ey~~ 486 (495)
|+++ ..++++ +..++||||+.
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g 151 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIG 151 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCE
T ss_pred hCCCCCCeEEEc----CCCEEEEEecC
Confidence 8865 333332 24589999994
No 407
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=97.90 E-value=9.1e-06 Score=82.19 Aligned_cols=60 Identities=15% Similarity=0.134 Sum_probs=46.7
Q ss_pred hccCCcccceeccCCceEEEEEEc-CCCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCC
Q 040888 403 ATANFATGRLLGEGTIGRVYRAKY-PDGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRH 462 (495)
Q Consensus 403 ~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H 462 (495)
.+..|...+.||+|+||.||+|.. .+|+.||||++..... .....+.|.+|+.++..++|
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~ 137 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG 137 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence 344567789999999999999996 5799999999874322 12235779999999999987
No 408
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.69 E-value=2.2e-05 Score=68.86 Aligned_cols=84 Identities=8% Similarity=0.126 Sum_probs=60.4
Q ss_pred CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCc-CCCccchhhhCC----CCCcEEEccCCc-CCCcCcccccCCCC
Q 040888 115 PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQ-LNGQLSDMFQKN----EKLETLDLSKNQ-LTGELPRSFASLSS 188 (495)
Q Consensus 115 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l----~~L~~L~ls~N~-l~g~~p~~~~~l~~ 188 (495)
.+|+.|||+++.++..--..+.++++|+.|+|+++. ++..--..+..+ ++|+.|+|+++. +|..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467777777777765545567788999999999985 665433445543 368899999874 77554455777888
Q ss_pred CCEEeccCCc
Q 040888 189 LKKLYLQNNQ 198 (495)
Q Consensus 189 L~~L~l~~N~ 198 (495)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999888875
No 409
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.68 E-value=7.8e-05 Score=62.19 Aligned_cols=56 Identities=23% Similarity=0.418 Sum_probs=43.6
Q ss_pred EEECcCCCCC-CCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCC
Q 040888 97 YLDVSNNNLK-DSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLN 152 (495)
Q Consensus 97 ~L~Ls~N~l~-g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 152 (495)
.+|.+++.|+ ..+|..++++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777775 4677778888999999999998666666777888888888888764
No 410
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.55 E-value=3e-05 Score=69.31 Aligned_cols=85 Identities=15% Similarity=0.183 Sum_probs=38.2
Q ss_pred CCCcEEECcCCcCCC----CcchhccCCCCCcEEEcccCcCCCc----cchhhhCCCCCcEEEccCC---cCCC----cC
Q 040888 115 PNLKHLDLSENQFSG----TVPYSISQMSELKYLNLGSNQLNGQ----LSDMFQKNEKLETLDLSKN---QLTG----EL 179 (495)
Q Consensus 115 ~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~ls~N---~l~g----~~ 179 (495)
..|+.|+|++|+|.. .+...+..-+.|+.|+|++|.|+.. +-+.+...+.|+.|+|++| .+.. .+
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~i 149 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDM 149 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHH
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHH
Confidence 344444444444432 1222233334555555555555422 2233444455666666543 2221 12
Q ss_pred cccccCCCCCCEEeccCCcc
Q 040888 180 PRSFASLSSLKKLYLQNNQF 199 (495)
Q Consensus 180 p~~~~~l~~L~~L~l~~N~l 199 (495)
-..+..-+.|+.|+++.|.+
T Consensus 150 a~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 150 MMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHhCCCcCeEeccCCCc
Confidence 23334445666666665543
No 411
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.39 E-value=3e-05 Score=69.31 Aligned_cols=65 Identities=20% Similarity=0.288 Sum_probs=37.0
Q ss_pred hhccCCCCCcEEEcccCcCCC----ccchhhhCCCCCcEEEccCCcCCCc----CcccccCCCCCCEEeccCC
Q 040888 133 YSISQMSELKYLNLGSNQLNG----QLSDMFQKNEKLETLDLSKNQLTGE----LPRSFASLSSLKKLYLQNN 197 (495)
Q Consensus 133 ~~~~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N 197 (495)
..+..-+.|+.|+|++|+|.. .+.+.+...+.|+.|+|+.|.|+.. +-..+..-+.|+.|+|++|
T Consensus 64 ~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 64 EAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred HHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 344555666677777776652 2334455556677777777766532 2233444455667776644
No 412
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=97.27 E-value=0.00078 Score=63.04 Aligned_cols=91 Identities=12% Similarity=0.055 Sum_probs=70.5
Q ss_pred HHHhccCCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCCEE
Q 040888 400 LLTATANFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSEQGHN 478 (495)
Q Consensus 400 ~~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~ 478 (495)
+.....+|.....++.|+.+.||+.... ++.+++|....... .....+.+|++++..++ |..+.++++++...+..
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~ 85 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS 85 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCce
Confidence 3344567777778888889999999864 67899999865321 11235888999998884 67788899999998999
Q ss_pred EEEEEecCCCCHhhh
Q 040888 479 ILIYDYYRNGSLHEF 493 (495)
Q Consensus 479 ~lv~ey~~~GsL~~~ 493 (495)
++||||++|.+|.+.
T Consensus 86 ~lv~e~i~G~~l~~~ 100 (263)
T 3tm0_A 86 NLLMSEADGVLCSEE 100 (263)
T ss_dssp EEEEECCSSEEHHHH
T ss_pred EEEEEecCCeehhhc
Confidence 999999999888763
No 413
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.14 E-value=0.0002 Score=62.74 Aligned_cols=82 Identities=12% Similarity=0.100 Sum_probs=63.6
Q ss_pred CCCcEEEcccCcCCCccchhhhCCCCCcEEEccCCc-CCCcCcccccCC----CCCCEEeccCCc-ccccc-cccCCcc-
Q 040888 139 SELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKNQ-LTGELPRSFASL----SSLKKLYLQNNQ-FTGSI-NVLGKLP- 210 (495)
Q Consensus 139 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~g~~-~~~~~~~- 210 (495)
-+|+.|||+++.++..--..+.++++|+.|+|+++. ++..--..++.+ ++|++|+|+++. +|..- ..+..++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 579999999999886655667899999999999995 776544456654 479999999985 77533 4455556
Q ss_pred CcEEEeecCC
Q 040888 211 LDELNVENNK 220 (495)
Q Consensus 211 L~~l~l~~N~ 220 (495)
|+.|+++++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999875
No 414
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=96.98 E-value=0.0009 Score=63.87 Aligned_cols=76 Identities=16% Similarity=0.222 Sum_probs=60.0
Q ss_pred ccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCC---CcceEEEEEEeCCEEEEEEEec
Q 040888 409 TGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHT---NIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 409 ~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~---niv~l~g~~~~~~~~~lv~ey~ 485 (495)
..+.|+.|.++.||+....+|+.++||+...... .....|.+|++.|+.++|. .+.+++++. ..++||||+
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~--~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCc--chhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 3567999999999999998999999999754321 1235789999999999876 467777763 258999999
Q ss_pred CCCCH
Q 040888 486 RNGSL 490 (495)
Q Consensus 486 ~~GsL 490 (495)
+++.+
T Consensus 93 ~g~~~ 97 (288)
T 3d1u_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred ccCCC
Confidence 99875
No 415
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.97 E-value=0.0033 Score=62.72 Aligned_cols=129 Identities=14% Similarity=0.225 Sum_probs=77.6
Q ss_pred ccccCCCCCCcEEECcCCCCCCCCCC-CCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCC
Q 040888 86 GYQLTNLKSVSYLDVSNNNLKDSIPY-QLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKN 162 (495)
Q Consensus 86 ~~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l 162 (495)
...|.+++.|+.+++..+... +.. .+. ++|+.+.+. +.++..-...|.++.+|+.+.|..+ ++..-..+|.++
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~--I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C 333 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS--IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGC 333 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE--ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred cceeeecccccEEecccccce--ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCC
Confidence 346777888888888765432 222 122 678888886 4455444556788888888888754 554445678888
Q ss_pred CCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccccccCCccCcEEEeecCC
Q 040888 163 EKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSINVLGKLPLDELNVENNK 220 (495)
Q Consensus 163 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~L~~l~l~~N~ 220 (495)
.+|+.+.|..+ ++..-...|.+|++|+.+++.+|..... .......|+.+.+..|.
T Consensus 334 ~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~~-~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 334 EQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQWN-AISTDSGLQNLPVAPGS 389 (394)
T ss_dssp TTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHHH-TCBCCCCC---------
T ss_pred CCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeehh-hhhccCCCCEEEeCCCC
Confidence 88888888654 6644456788888888888887754311 11122225666555443
No 416
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.96 E-value=0.0014 Score=54.42 Aligned_cols=56 Identities=25% Similarity=0.347 Sum_probs=31.0
Q ss_pred EEEcccCcCC-CccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCccc
Q 040888 143 YLNLGSNQLN-GQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFT 200 (495)
Q Consensus 143 ~L~L~~N~l~-g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 200 (495)
.++.+++.|+ ..+|..+ ..+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4444455443 2333222 134666666666666555555666666777777777654
No 417
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=96.91 E-value=0.0008 Score=62.61 Aligned_cols=81 Identities=17% Similarity=0.170 Sum_probs=59.8
Q ss_pred CCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCc--ceEEEEEEeCCEEEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNI--AELVGFCSEQGHNILIYD 483 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~ni--v~l~g~~~~~~~~~lv~e 483 (495)
++....+.+.|..+.||+....+|..+++|...... ...+.+|++++..+++.++ .+++++...++..++|||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 444333334566699999988778889999975431 2357788888888865554 458888887778899999
Q ss_pred ecCCCCHh
Q 040888 484 YYRNGSLH 491 (495)
Q Consensus 484 y~~~GsL~ 491 (495)
|+++.+|.
T Consensus 96 ~i~G~~l~ 103 (264)
T 1nd4_A 96 EVPGQDLL 103 (264)
T ss_dssp CCSSEETT
T ss_pred ecCCcccC
Confidence 99998774
No 418
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.73 E-value=0.0051 Score=60.85 Aligned_cols=126 Identities=12% Similarity=0.197 Sum_probs=79.2
Q ss_pred ccccCCCCCCcEEECcCCCCCCCCCC-CCC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCC
Q 040888 86 GYQLTNLKSVSYLDVSNNNLKDSIPY-QLP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKN 162 (495)
Q Consensus 86 ~~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l 162 (495)
...+..+..|+.+.+..+ +. .++. .+. ..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c 285 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VT-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGC 285 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CC-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTC
T ss_pred ecccccccccceeeeccc-ee-EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccc
Confidence 445667777888877654 22 1221 121 67888888765 54344556777888888888644 444445567788
Q ss_pred CCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEe
Q 040888 163 EKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNV 216 (495)
Q Consensus 163 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l 216 (495)
.+|+.+.+.++.++..-...|.++.+|+.+.|..+ ++..- ..+.... |+.+.+
T Consensus 286 ~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 286 SNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp TTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred cccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 88888888888777555667888888888888654 33222 3344433 555544
No 419
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.60 E-value=0.007 Score=60.32 Aligned_cols=123 Identities=13% Similarity=0.213 Sum_probs=81.4
Q ss_pred CEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCCC-CC--CCCcEEECcCCcCCCCcchhccCCCCCcEEEc
Q 040888 70 SVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPYQ-LP--PNLKHLDLSENQFSGTVPYSISQMSELKYLNL 146 (495)
Q Consensus 70 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 146 (495)
.++.+.+.++-. -.-...|.+++.|+.+++.. .+. .|+.. +. .+|+.++|..+ ++..-...|.+|.+|+.+.|
T Consensus 266 ~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~~-~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 266 YLASVKMPDSVV-SIGTGAFMNCPALQDIEFSS-RIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SCCEEECCTTCC-EECTTTTTTCTTCCEEECCT-TCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cccEEecccccc-eecCcccccccccccccCCC-ccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 456666654332 23345688999999999974 444 34433 32 79999999865 66444567999999999999
Q ss_pred ccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCccc
Q 040888 147 GSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFT 200 (495)
Q Consensus 147 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 200 (495)
..+ ++..-..+|.++.+|+.+++.+|.... ..+..+.+|+.+.+..|.+.
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 755 665556789999999999999987542 45778889999988877653
No 420
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.53 E-value=0.0082 Score=59.77 Aligned_cols=142 Identities=15% Similarity=0.132 Sum_probs=95.3
Q ss_pred CCEeEEEcCCCCCccccccccCCCCCCcEEECcCCCCCCCCCC-CC--CCCCcEEECcCCcCCCCcchhccCCCCCcEEE
Q 040888 69 SSVTEIKLSGLGLNGQLGYQLTNLKSVSYLDVSNNNLKDSIPY-QL--PPNLKHLDLSENQFSGTVPYSISQMSELKYLN 145 (495)
Q Consensus 69 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~g~~p~-~~--~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 145 (495)
..++.+.+... ++..-...+.++..|+.+.+..+... ++. .+ ...++.+.+..+.+. ...+..+.+|+.+.
T Consensus 230 ~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~--i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~ 303 (394)
T 4fs7_A 230 TGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR--IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVK 303 (394)
T ss_dssp CCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE--ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEE
T ss_pred CCCceEEECCC-ceecccccccccccceeEEcCCCcce--eeccccccccccceeccCceeec---cccccccccccccc
Confidence 35677777543 33333456788899999999877543 221 12 267777777766532 24577888899888
Q ss_pred cccCcCCCccchhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecC
Q 040888 146 LGSNQLNGQLSDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENN 219 (495)
Q Consensus 146 L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N 219 (495)
+..+ ++..-..+|.++.+|+.++|.++ ++..-...|.++.+|+.+++..| ++..- ..+.... |+.+++..+
T Consensus 304 l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 304 LLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp ECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 8765 55445567888889999998754 66455667888899999988776 44322 4555544 888888654
No 421
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.41 E-value=0.03 Score=55.68 Aligned_cols=124 Identities=15% Similarity=0.098 Sum_probs=72.4
Q ss_pred ccCCCCCCcEEECcCCCCCCCCCCC-C--CCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCC
Q 040888 88 QLTNLKSVSYLDVSNNNLKDSIPYQ-L--PPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEK 164 (495)
Q Consensus 88 ~~~~l~~L~~L~Ls~N~l~g~~p~~-~--~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~ 164 (495)
.....+.|+.+.+..+. + .+... + ...|+.+.+..+... .....|..+..|+.+.+..+.+. ...|..+.+
T Consensus 225 ~~~~~~~l~~i~ip~~~-~-~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~ 298 (394)
T 4fs7_A 225 FALSKTGVKNIIIPDSF-T-ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSS 298 (394)
T ss_dssp TTTTTCCCCEEEECTTC-C-EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTT
T ss_pred hhcccCCCceEEECCCc-e-ecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccccc
Confidence 34445667777765432 1 11111 1 267777777766543 44456677777777777665432 245667777
Q ss_pred CcEEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecC
Q 040888 165 LETLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENN 219 (495)
Q Consensus 165 L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N 219 (495)
|+.+.+..+ ++..-...|.++.+|+.++|..+ ++..- ..+.... |+.+++..|
T Consensus 299 L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 299 LTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred ccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 888877654 55444556777788888887644 43222 3444433 777776554
No 422
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.05 E-value=0.028 Score=55.39 Aligned_cols=129 Identities=14% Similarity=0.137 Sum_probs=77.6
Q ss_pred ccCCCCCCcEEECcCCCCC-CCCCCCCCCCCcEEECcCCcCCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCc
Q 040888 88 QLTNLKSVSYLDVSNNNLK-DSIPYQLPPNLKHLDLSENQFSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLE 166 (495)
Q Consensus 88 ~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~ 166 (495)
.+.....+..+.+..+.-. +........+|+.+.+..+ +.......+.++.+|+.+.+..+ ++..-...|.++.+|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~ 266 (379)
T 4h09_A 189 SYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALK 266 (379)
T ss_dssp ECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred cccccccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhc
Confidence 3445555555555433211 1111111267777777654 33334456777888888888765 5544456777788888
Q ss_pred EEEccCCcCCCcCcccccCCCCCCEEeccCCcccccc-cccCCcc-CcEEEeecC
Q 040888 167 TLDLSKNQLTGELPRSFASLSSLKKLYLQNNQFTGSI-NVLGKLP-LDELNVENN 219 (495)
Q Consensus 167 ~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~-L~~l~l~~N 219 (495)
.+.+..+ ++..-...|.++.+|+.+.+.++.++... ..+.... |+.+++..+
T Consensus 267 ~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 267 TLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp EEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred ccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 8888654 54344456778888888888877766433 4444443 777777543
No 423
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=94.50 E-value=0.036 Score=54.22 Aligned_cols=80 Identities=10% Similarity=0.287 Sum_probs=55.9
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEec--CcccccccHHHHHHHHHHHhcCC--CCCcceEEEEEEeC---CEEEEEE
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKID--SSHFQRANSESFSEIVQNISRIR--HTNIAELVGFCSEQ---GHNILIY 482 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~--~~~~~~~~~~~f~~e~~~l~~l~--H~niv~l~g~~~~~---~~~~lv~ 482 (495)
.+.++.|.++.||+....+ ..+++|+.. ..... .....+.+|.+++..++ +..+.++++++... +..++||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~-~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLL-PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCC-CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 5678999999999998865 577888775 33211 12346788999998887 45577888888766 3478999
Q ss_pred EecCCCCHh
Q 040888 483 DYYRNGSLH 491 (495)
Q Consensus 483 ey~~~GsL~ 491 (495)
||+++..+.
T Consensus 121 e~v~G~~l~ 129 (359)
T 3dxp_A 121 EFVSGRVLW 129 (359)
T ss_dssp ECCCCBCCC
T ss_pred EecCCeecC
Confidence 999987763
No 424
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=92.51 E-value=0.27 Score=46.27 Aligned_cols=78 Identities=17% Similarity=0.254 Sum_probs=53.9
Q ss_pred CcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCC---CcceEEEEEEeCCEEEEEEE
Q 040888 407 FATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHT---NIAELVGFCSEQGHNILIYD 483 (495)
Q Consensus 407 f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~---niv~l~g~~~~~~~~~lv~e 483 (495)
+.....+|.|..+.||+.++.+|+.|.||+-..... .....|.+|.+.|..+.-. -+.+++++ .. .++|+|
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~e 90 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAME 90 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEEE
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEEE
Confidence 334577899999999999999999999998754322 1234578898888877422 23344433 33 368999
Q ss_pred ecCCCCH
Q 040888 484 YYRNGSL 490 (495)
Q Consensus 484 y~~~GsL 490 (495)
|++.+..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9987653
No 425
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=92.23 E-value=0.49 Score=45.23 Aligned_cols=76 Identities=16% Similarity=0.251 Sum_probs=59.0
Q ss_pred ccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC---CCCcceEEEEEEeCCEEEEEEEec
Q 040888 409 TGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR---HTNIAELVGFCSEQGHNILIYDYY 485 (495)
Q Consensus 409 ~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ey~ 485 (495)
....|+.|.+..+|+... ++..++||.-... ....|.+|.+.|..+. ...+.++++++...+..++||||+
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 346789999999999987 4667888886532 2456888988887773 356778888888788899999999
Q ss_pred CCCCH
Q 040888 486 RNGSL 490 (495)
Q Consensus 486 ~~GsL 490 (495)
++..+
T Consensus 114 ~G~~~ 118 (312)
T 3jr1_A 114 NKSKN 118 (312)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 98764
No 426
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=91.46 E-value=0.66 Score=42.82 Aligned_cols=77 Identities=12% Similarity=0.136 Sum_probs=55.7
Q ss_pred ceeccCCce-EEEEEEcC-CCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIG-RVYRAKYP-DGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g-~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
..+..|..| .||+.... ++..+.+|+-... ...++.+|...|..+. +--+.++++++...+..++|||++++
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G 104 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPG 104 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCS
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCC
Confidence 345556665 68988764 4667888886543 2456788888888774 22355788999999999999999998
Q ss_pred CCHhh
Q 040888 488 GSLHE 492 (495)
Q Consensus 488 GsL~~ 492 (495)
.++.+
T Consensus 105 ~~~~~ 109 (272)
T 4gkh_A 105 KTAFQ 109 (272)
T ss_dssp EEHHH
T ss_pred ccccc
Confidence 77654
No 427
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=90.62 E-value=0.03 Score=57.06 Aligned_cols=62 Identities=6% Similarity=-0.039 Sum_probs=18.1
Q ss_pred cceeccCCceEEEEEEcCC-CCEEEE------EEecCcccccccHHHHHHHHHHHhcCCCCCcceEEEEEEe
Q 040888 410 GRLLGEGTIGRVYRAKYPD-GKVLAV------KKIDSSHFQRANSESFSEIVQNISRIRHTNIAELVGFCSE 474 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~-g~~vav------K~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~ 474 (495)
.+.+| ||.||+|.+.. ...||| |....+.......+.|.+|..++...+|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 45566 99999999854 467888 7776544433334678899999999999999999988764
No 428
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=90.22 E-value=0.42 Score=45.73 Aligned_cols=74 Identities=14% Similarity=0.117 Sum_probs=52.7
Q ss_pred CCcccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCC----CCcceEEEEEEeCCEEEEE
Q 040888 406 NFATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRH----TNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 406 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H----~niv~l~g~~~~~~~~~lv 481 (495)
.......++.|....||+. |..+++|...... ....+.+|.+++..+++ ..+.+++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~----~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS----VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH----HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH----HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 4455678999999999998 5667888764321 13468899988888866 123344444 456899
Q ss_pred EEecCCCCHh
Q 040888 482 YDYYRNGSLH 491 (495)
Q Consensus 482 ~ey~~~GsL~ 491 (495)
|||+++.++.
T Consensus 106 me~i~G~~l~ 115 (320)
T 3r70_A 106 MKYIKGERIT 115 (320)
T ss_dssp EECCCCBCCC
T ss_pred EeecCCcccc
Confidence 9999998775
No 429
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=87.91 E-value=0.57 Score=46.26 Aligned_cols=77 Identities=8% Similarity=0.090 Sum_probs=49.0
Q ss_pred cceeccCCceEEEEEEcC-CCCEEEEEEecCccc----c-cccHHHHHHHHHHHhcCCC--CCcc-eEEEEEEeCCEEEE
Q 040888 410 GRLLGEGTIGRVYRAKYP-DGKVLAVKKIDSSHF----Q-RANSESFSEIVQNISRIRH--TNIA-ELVGFCSEQGHNIL 480 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~-~~~~~~f~~e~~~l~~l~H--~niv-~l~g~~~~~~~~~l 480 (495)
.+.+|.|.++.||++... +++.++||....... . ......+..|.+++..+.+ +..+ +++.+ ..+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467899999999999874 468899998653211 0 0113456778888887632 4444 44433 3445689
Q ss_pred EEEecCCC
Q 040888 481 IYDYYRNG 488 (495)
Q Consensus 481 v~ey~~~G 488 (495)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 430
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=86.74 E-value=1.7 Score=42.32 Aligned_cols=76 Identities=13% Similarity=0.121 Sum_probs=55.7
Q ss_pred cccceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCC--cceEEEEEEeC-CEEEEEEEe
Q 040888 408 ATGRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTN--IAELVGFCSEQ-GHNILIYDY 484 (495)
Q Consensus 408 ~~~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~n--iv~l~g~~~~~-~~~~lv~ey 484 (495)
.....++.|....+|+... ++..+++|.-... ..+.+|..++..+.... +.++++++... +..++||||
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~ 115 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRR 115 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEEC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEe
Confidence 3456789999999999876 5778888876432 25788888888876544 44677777654 568999999
Q ss_pred cCCCCHh
Q 040888 485 YRNGSLH 491 (495)
Q Consensus 485 ~~~GsL~ 491 (495)
+++..+.
T Consensus 116 l~G~~l~ 122 (362)
T 3ovc_A 116 AQGVTLQ 122 (362)
T ss_dssp CCSEETT
T ss_pred cCCCCcc
Confidence 9976553
No 431
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=83.40 E-value=2.2 Score=40.37 Aligned_cols=75 Identities=17% Similarity=0.158 Sum_probs=53.3
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCC---CcceEEEEEE-eCCEEEEEEEec
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHT---NIAELVGFCS-EQGHNILIYDYY 485 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~---niv~l~g~~~-~~~~~~lv~ey~ 485 (495)
...++.|....||+. |..+++|.-... .....+.+|.++|..+++. .+.+++.++. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~----~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ----QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH----HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc----hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 356788999999988 456778874321 1245788999999998753 2456676664 345578999999
Q ss_pred CCCCHhh
Q 040888 486 RNGSLHE 492 (495)
Q Consensus 486 ~~GsL~~ 492 (495)
++..+.+
T Consensus 96 ~G~~l~~ 102 (306)
T 3tdw_A 96 QGQILGE 102 (306)
T ss_dssp CSEECHH
T ss_pred CCeECch
Confidence 9877653
No 432
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=75.17 E-value=1.2 Score=43.03 Aligned_cols=81 Identities=7% Similarity=0.013 Sum_probs=52.9
Q ss_pred cee-ccCCceEEEEEEcC-------CCCEEEEEEecCccc-ccccHHHHHHHHHHHhcCCC---CCcceEEEEEEeC---
Q 040888 411 RLL-GEGTIGRVYRAKYP-------DGKVLAVKKIDSSHF-QRANSESFSEIVQNISRIRH---TNIAELVGFCSEQ--- 475 (495)
Q Consensus 411 ~~i-G~G~~g~Vy~~~~~-------~g~~vavK~l~~~~~-~~~~~~~f~~e~~~l~~l~H---~niv~l~g~~~~~--- 475 (495)
+.| +.|....+|+.... ++..+++|.-..... .......+.+|++++..++. -.+.++++++...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88889999988764 256788887654320 00011346677777777642 2456778777654
Q ss_pred CEEEEEEEecCCCCHh
Q 040888 476 GHNILIYDYYRNGSLH 491 (495)
Q Consensus 476 ~~~~lv~ey~~~GsL~ 491 (495)
+..++||||+++..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3468999999986654
No 433
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=69.76 E-value=2.5 Score=39.78 Aligned_cols=74 Identities=18% Similarity=0.129 Sum_probs=49.3
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-CCCc--ceEEEEEEeCC---EEEEEEE
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-HTNI--AELVGFCSEQG---HNILIYD 483 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-H~ni--v~l~g~~~~~~---~~~lv~e 483 (495)
.+.++.|....||+.. ..+++|.-... .....+.+|.+++..+. +..+ .+++......+ ..++|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 3568999999999863 45788876432 12467889999998873 3333 34444433332 3478999
Q ss_pred ecCCCCHh
Q 040888 484 YYRNGSLH 491 (495)
Q Consensus 484 y~~~GsL~ 491 (495)
|+++..+.
T Consensus 97 ~i~G~~l~ 104 (304)
T 3sg8_A 97 KIKGVPLT 104 (304)
T ss_dssp CCCCEECC
T ss_pred ccCCeECC
Confidence 99987665
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=68.13 E-value=10 Score=35.68 Aligned_cols=75 Identities=19% Similarity=0.237 Sum_probs=47.7
Q ss_pred ceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCC--cceEEEE-----EEeCCEEEEEEE
Q 040888 411 RLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTN--IAELVGF-----CSEQGHNILIYD 483 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~n--iv~l~g~-----~~~~~~~~lv~e 483 (495)
..++ |....||+....+|+.+++|....... ....+..|..++..++... +++++.. ....+..++|||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 3466 778899998877787889999864321 1345666777766653222 3333332 223556788999
Q ss_pred ecCCCC
Q 040888 484 YYRNGS 489 (495)
Q Consensus 484 y~~~Gs 489 (495)
|+++..
T Consensus 108 ~i~G~~ 113 (328)
T 1zyl_A 108 SVGGRQ 113 (328)
T ss_dssp CCCCEE
T ss_pred ecCCCC
Confidence 998754
No 435
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=66.41 E-value=6.2 Score=25.34 Aligned_cols=8 Identities=75% Similarity=1.174 Sum_probs=3.0
Q ss_pred HHHhhccC
Q 040888 295 IALFSRRR 302 (495)
Q Consensus 295 ~~~~~~rr 302 (495)
++++.|||
T Consensus 31 ~~~~~RRr 38 (44)
T 2ks1_B 31 IGLFMRRR 38 (44)
T ss_dssp HHHHHHTT
T ss_pred HHHHhhhh
Confidence 33333333
No 436
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=65.87 E-value=9.4 Score=36.00 Aligned_cols=73 Identities=11% Similarity=0.248 Sum_probs=40.5
Q ss_pred ceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhc-----CCCCCcceEE-E--EEEeCCEEEEEE
Q 040888 411 RLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISR-----IRHTNIAELV-G--FCSEQGHNILIY 482 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~-----l~H~niv~l~-g--~~~~~~~~~lv~ 482 (495)
..|+.|..+.||+....+| .+++|+..... .....|.+++.. +..|.++.-. | +....+..++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~------~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE------KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH------HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH------HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 4466677899999987665 48899886521 222233333333 3334444310 1 123467789999
Q ss_pred EecCCCCH
Q 040888 483 DYYRNGSL 490 (495)
Q Consensus 483 ey~~~GsL 490 (495)
||+++..+
T Consensus 111 ~~i~G~~~ 118 (346)
T 2q83_A 111 DWIEGRPF 118 (346)
T ss_dssp ECCCCBCC
T ss_pred EeecCccC
Confidence 99998654
No 437
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=64.86 E-value=6.8 Score=25.12 Aligned_cols=6 Identities=33% Similarity=0.999 Sum_probs=2.2
Q ss_pred HhhccC
Q 040888 297 LFSRRR 302 (495)
Q Consensus 297 ~~~~rr 302 (495)
++.|||
T Consensus 32 ~~~RRR 37 (44)
T 2l2t_A 32 VYVRRK 37 (44)
T ss_dssp HHHHTT
T ss_pred HHhhhh
Confidence 333333
No 438
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=63.61 E-value=5.2 Score=24.79 Aligned_cols=21 Identities=29% Similarity=0.453 Sum_probs=9.0
Q ss_pred ehHHHHHHHHHHHHHHHhhcc
Q 040888 281 AIAVLLALAIIAIVIALFSRR 301 (495)
Q Consensus 281 ~i~vll~l~~v~i~~~~~~~r 301 (495)
++++++.+++++.+.+++.||
T Consensus 17 VvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 17 IFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC
T ss_pred ehHHHHHHHHHHHHHHHHeec
Confidence 344444444444344444443
No 439
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=57.91 E-value=16 Score=34.19 Aligned_cols=91 Identities=8% Similarity=0.058 Sum_probs=49.9
Q ss_pred ccHHHHHHhccCCcc-----cceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCC-----CCC
Q 040888 395 FSMADLLTATANFAT-----GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIR-----HTN 464 (495)
Q Consensus 395 ~~~~~~~~~t~~f~~-----~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~-----H~n 464 (495)
++.+++......|.. .+.|+.|....+|+....+| .+++|....... .+.+..|++++..++ -|.
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~----~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE----KNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC----HHHHHHHHHHHHHHHHCCCCCCc
Confidence 455666555555554 23466788889999987666 577888765211 223455666665543 233
Q ss_pred cceEE-E--EEEeCCEEEEEEEecCCCCH
Q 040888 465 IAELV-G--FCSEQGHNILIYDYYRNGSL 490 (495)
Q Consensus 465 iv~l~-g--~~~~~~~~~lv~ey~~~GsL 490 (495)
++.-. | +....+..++++||+++..+
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~ 110 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWL 110 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCC
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCC
Confidence 33210 1 11234567899999997654
No 440
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=56.91 E-value=8.6 Score=24.61 Aligned_cols=6 Identities=50% Similarity=0.888 Sum_probs=2.2
Q ss_pred HhhccC
Q 040888 297 LFSRRR 302 (495)
Q Consensus 297 ~~~~rr 302 (495)
+.+||+
T Consensus 34 ~~RRR~ 39 (44)
T 2jwa_A 34 LIKRRQ 39 (44)
T ss_dssp HHHHHC
T ss_pred heehhh
Confidence 333333
No 441
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=40.69 E-value=46 Score=32.53 Aligned_cols=75 Identities=12% Similarity=0.146 Sum_probs=44.7
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEecCccc--cc-----ccHHHHHHHHHHHh-cCCCCCcceEEEEEEeCCEEEEE
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHF--QR-----ANSESFSEIVQNIS-RIRHTNIAELVGFCSEQGHNILI 481 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~-----~~~~~f~~e~~~l~-~l~H~niv~l~g~~~~~~~~~lv 481 (495)
...+|.|..+.||+... ++..++||....... .. .....+..|+..+. ...+..+.+++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 46789999999999975 567899994322100 00 01233444443332 22234455666554 4567899
Q ss_pred EEec-CC
Q 040888 482 YDYY-RN 487 (495)
Q Consensus 482 ~ey~-~~ 487 (495)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 442
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=33.05 E-value=45 Score=32.92 Aligned_cols=73 Identities=10% Similarity=0.151 Sum_probs=48.3
Q ss_pred cceeccCCceEEEEEEcCC--------CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCc-ceEEEEEEeCCEEEE
Q 040888 410 GRLLGEGTIGRVYRAKYPD--------GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNI-AELVGFCSEQGHNIL 480 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~l 480 (495)
...|+.|-...+|+...++ +..+.+|+..... ....+.+|..++..+...++ .++++.+. + .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~----~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE----TESHLVAESVIFTLLSERHLGPKLYGIFS--G--GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC----CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC----cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CE
Confidence 3567888889999998753 4678888874311 11455678888877754444 45666543 2 38
Q ss_pred EEEecCCCCH
Q 040888 481 IYDYYRNGSL 490 (495)
Q Consensus 481 v~ey~~~GsL 490 (495)
|+||+++..+
T Consensus 150 v~e~l~G~~l 159 (429)
T 1nw1_A 150 LEEYIPSRPL 159 (429)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeCCccc
Confidence 9999986443
No 443
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=28.81 E-value=63 Score=24.52 Aligned_cols=40 Identities=20% Similarity=0.329 Sum_probs=22.1
Q ss_pred chhhhCCCCCcEEEccCCcCCCcCcccccCCCCCCEEeccC
Q 040888 156 SDMFQKNEKLETLDLSKNQLTGELPRSFASLSSLKKLYLQN 196 (495)
Q Consensus 156 p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 196 (495)
...|.++.+|+.+.+-.+ ++..-...|.+|.+|+.+.+..
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 345556666666665543 3323344566666666666544
No 444
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=26.82 E-value=52 Score=31.88 Aligned_cols=73 Identities=12% Similarity=0.195 Sum_probs=42.5
Q ss_pred ceeccCCceEEEEEEcCC--------CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCc-ceEEEEEEeCCEEEEE
Q 040888 411 RLLGEGTIGRVYRAKYPD--------GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNI-AELVGFCSEQGHNILI 481 (495)
Q Consensus 411 ~~iG~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lv 481 (495)
+.+..|-...+|+...++ +..+.+|+-... . .....+.+|.++++.+.-..+ .++++++. + .+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~--~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v 128 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-L--QGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRL 128 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-c--chHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccE
Confidence 456777788899998752 467888875321 1 124456688888877643333 35555543 3 389
Q ss_pred EEecCCCCH
Q 040888 482 YDYYRNGSL 490 (495)
Q Consensus 482 ~ey~~~GsL 490 (495)
+||+++..|
T Consensus 129 ~e~i~G~~l 137 (379)
T 3feg_A 129 EQYIPSRPL 137 (379)
T ss_dssp EECCSEEEC
T ss_pred EEEecCccC
Confidence 999997554
No 445
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=25.26 E-value=1.1e+02 Score=30.49 Aligned_cols=74 Identities=11% Similarity=0.040 Sum_probs=46.0
Q ss_pred cceeccCCceEEEEEEcCC-CCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcc-eEEEEEEeCCEEEEEEEecCC
Q 040888 410 GRLLGEGTIGRVYRAKYPD-GKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIA-ELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~ey~~~ 487 (495)
...|+.|-...+|+...++ +..+.+|+...... . .-+..+|..++..+...+++ ++++++ .+ .+||||+++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~--~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-E--IINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-S--CSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-h--hcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCC
Confidence 3568888889999998865 46778887643211 1 11124677778877655554 566665 23 359999987
Q ss_pred CCH
Q 040888 488 GSL 490 (495)
Q Consensus 488 GsL 490 (495)
..|
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 444
No 446
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=24.61 E-value=1.6e+02 Score=27.25 Aligned_cols=76 Identities=14% Similarity=0.174 Sum_probs=36.6
Q ss_pred ceeccCCceE-EEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCC--CCcceEEEEEEeCCEEEEEEEecCC
Q 040888 411 RLLGEGTIGR-VYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRH--TNIAELVGFCSEQGHNILIYDYYRN 487 (495)
Q Consensus 411 ~~iG~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv~ey~~~ 487 (495)
..++.|.... +|+....+|..+++|....... ..+..|+.++..++. -.+.+++.+....+ +++||++.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~-----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~ 96 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG-----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD 96 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT-----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC-----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence 3455554444 6677664466777776543210 122334444444422 23445666543333 689999977
Q ss_pred CCHhhh
Q 040888 488 GSLHEF 493 (495)
Q Consensus 488 GsL~~~ 493 (495)
..+.++
T Consensus 97 ~~l~~~ 102 (333)
T 3csv_A 97 ALFTEV 102 (333)
T ss_dssp CBHHHH
T ss_pred cchHHH
Confidence 666544
No 447
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=23.91 E-value=83 Score=28.87 Aligned_cols=71 Identities=10% Similarity=0.107 Sum_probs=40.9
Q ss_pred cceeccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcCCCCCcc-eEEEEEEeCCEEEEEEEec-CC
Q 040888 410 GRLLGEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRIRHTNIA-ELVGFCSEQGHNILIYDYY-RN 487 (495)
Q Consensus 410 ~~~iG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~ey~-~~ 487 (495)
.+.|+.|....+|+. ..+.+|.-...... .-...+|...+..+....+. +++++ ..+.-++|+||+ ++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~---~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g 92 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE---YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGA 92 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc---eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCC
Confidence 577899999999998 45777776543111 01123566666555333333 45543 333357899999 54
Q ss_pred CCH
Q 040888 488 GSL 490 (495)
Q Consensus 488 GsL 490 (495)
-++
T Consensus 93 ~~l 95 (301)
T 3dxq_A 93 QTM 95 (301)
T ss_dssp EEC
T ss_pred ccC
Confidence 333
No 448
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=23.58 E-value=1.5e+02 Score=22.31 Aligned_cols=46 Identities=17% Similarity=0.192 Sum_probs=31.7
Q ss_pred CCCCcchhccCCCCCcEEEcccCcCCCccchhhhCCCCCcEEEccCC
Q 040888 127 FSGTVPYSISQMSELKYLNLGSNQLNGQLSDMFQKNEKLETLDLSKN 173 (495)
Q Consensus 127 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N 173 (495)
++..-...|.++.+|+.+.|-.+ ++..-...|.++.+|+.+.+...
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34344456778888888888764 44444567888888888887654
No 449
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=22.56 E-value=1.9e+02 Score=27.05 Aligned_cols=68 Identities=15% Similarity=0.052 Sum_probs=40.1
Q ss_pred ccCCceEEEEEEcCCCCEEEEEEecCcccccccHHHHHHHHHHHhcC---CCCCcceEEEE------EEeCCEEEEEEEe
Q 040888 414 GEGTIGRVYRAKYPDGKVLAVKKIDSSHFQRANSESFSEIVQNISRI---RHTNIAELVGF------CSEQGHNILIYDY 484 (495)
Q Consensus 414 G~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~f~~e~~~l~~l---~H~niv~l~g~------~~~~~~~~lv~ey 484 (495)
|.|....||+....+| .+++|+...... .+|++++..+ .-|.+.+.+.. +...+..++||||
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~--------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~ 102 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD--------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPF 102 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC--------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEEC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc--------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEec
Confidence 3344679999998777 889998755321 1233333332 11223333322 2335678999999
Q ss_pred cCCCCH
Q 040888 485 YRNGSL 490 (495)
Q Consensus 485 ~~~GsL 490 (495)
+++..+
T Consensus 103 i~G~~~ 108 (339)
T 3i1a_A 103 IHAPNG 108 (339)
T ss_dssp CCCCBT
T ss_pred cCCCcC
Confidence 998655
Done!