BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 040904
         (92 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var.
          radiata GN=ARG7 PE=2 SV=1
          Length = 92

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 48/66 (72%), Gaps = 1/66 (1%)

Query: 27 DVPKGHCVVYVGENRSRYIIPITWLNHPKFKNLLEKAAEEYGYKHDL-GIILPCDERVFR 85
          D PKG+  VYVGEN  R++IP++ LN P F++LL +A EE+GY H + G+ +PC E +F+
Sbjct: 24 DAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQ 83

Query: 86 QLTSWL 91
           +TS L
Sbjct: 84 HITSCL 89


>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1
          Length = 90

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 49/66 (74%), Gaps = 1/66 (1%)

Query: 27 DVPKGHCVVYVGENRSRYIIPITWLNHPKFKNLLEKAAEEYGYKH-DLGIILPCDERVFR 85
          DV KG+  VYVGE   R++IP+++LN P F++LL +A EE+GY H + G+ +PC E VF+
Sbjct: 24 DVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQ 83

Query: 86 QLTSWL 91
           +TS+L
Sbjct: 84 HITSFL 89


>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
          Length = 82

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 48/66 (72%), Gaps = 1/66 (1%)

Query: 27 DVPKGHCVVYVGENRSRYIIPITWLNHPKFKNLLEKAAEEYGYKHDL-GIILPCDERVFR 85
          D PKG+  VYVGE   R++IP+++LN P F++LL +A EE+GY H + G+ +PC E VF+
Sbjct: 16 DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 86 QLTSWL 91
           +TS L
Sbjct: 76 CITSCL 81


>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1
          Length = 82

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 48/66 (72%), Gaps = 1/66 (1%)

Query: 27 DVPKGHCVVYVGENRSRYIIPITWLNHPKFKNLLEKAAEEYGYKHDL-GIILPCDERVFR 85
          D PKG+  VYVGE   R++IP++++N P F++LL +A EE+GY H + G+ +PC E VF+
Sbjct: 16 DAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQ 75

Query: 86 QLTSWL 91
          ++T  L
Sbjct: 76 RITCCL 81


>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
          Length = 92

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)

Query: 27 DVPKGHCVVYVGENRSRYIIPITWLNHPKFKNLLEKAAEEYGYKHDL-GIILPCDERVFR 85
          +VPKG+ VVYVG+   R++IP+++LN P F++LL +A EE+GY H + G+ +PC E  F 
Sbjct: 24 EVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFL 83

Query: 86 QLTSWL 91
           +TS L
Sbjct: 84 TVTSHL 89


>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1
          Length = 93

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)

Query: 27 DVPKGHCVVYVGENRSRYIIPITWLNHPKFKNLLEKAAEEYGYKHDL-GIILPCDERVFR 85
          DVPKG+  VYVG+   R+ IP+++LN P F+ LL +A EE+GY H + G+ +PC E  F 
Sbjct: 25 DVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFL 84

Query: 86 QLTSWL 91
           +T+ L
Sbjct: 85 NVTAHL 90


>sp|Q9JLC8|SACS_MOUSE Sacsin OS=Mus musculus GN=Sacs PE=1 SV=2
          Length = 4582

 Score = 32.0 bits (71), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 3/93 (3%)

Query: 3    IQEIFKQCSSFGKKCSCDQDGHPNDVPKGHCVVYVGENRSRYII-PITWLNHPKFKNLLE 61
            +  + K+ +   K CS      P DVPK  C++ +      ++   I  L  P F+   +
Sbjct: 1730 VLSVLKEAAKLMKTCSSSNKKLPTDVPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDD 1789

Query: 62   KAAEEYGYKHDLGIILPCDERVFRQL--TSWLI 92
              A  +          P DE   + +  T+WLI
Sbjct: 1790 DPATLFEMAKSGQSKKPSDELPQKTVDCTTWLI 1822


>sp|Q9P272|K1456_HUMAN Putative methyltransferase KIAA1456 OS=Homo sapiens GN=KIAA1456
           PE=2 SV=3
          Length = 454

 Score = 30.8 bits (68), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 8/78 (10%)

Query: 5   EIFKQCSSFGKKCSCD--QDGHPNDVPKGHCVVYV------GENRSRYIIPITWLNHPKF 56
           ++F + S  G+K  C   + GHP   P   C   V      G  RS  +     +    F
Sbjct: 167 QLFSESSQSGRKRQCGYPERGHPYHPPCSECSCSVCFKEQCGSKRSHSVGYEPAMARTCF 226

Query: 57  KNLLEKAAEEYGYKHDLG 74
            N+ ++  EEYG+   LG
Sbjct: 227 ANISKEGEEEYGFYSTLG 244


>sp|Q9VX91|UBR1_DROME E3 ubiquitin-protein ligase UBR1 OS=Drosophila melanogaster GN=UBR1
            PE=2 SV=2
          Length = 1824

 Score = 30.4 bits (67), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 9/57 (15%)

Query: 43   RYIIPITWLNHPKFKNLLEKAAEEYGYKHDLGIILPCD--------ERVFRQLTSWL 91
            RY IP   L   K K L+E+ +EE    H   +++PC+        E V RQ++S+L
Sbjct: 1524 RYNIPARVLQKTKQKQLVEEESEE-NQGHGQTVVIPCESHHLALLLEYVQRQMSSFL 1579


>sp|Q6MDE0|DAPAT_PARUW LL-diaminopimelate aminotransferase OS=Protochlamydia amoebophila
           (strain UWE25) GN=dapL PE=1 SV=2
          Length = 411

 Score = 29.3 bits (64), Expect = 8.1,   Method: Composition-based stats.
 Identities = 18/36 (50%), Positives = 21/36 (58%)

Query: 55  KFKNLLEKAAEEYGYKHDLGIILPCDERVFRQLTSW 90
           K  N+L+KA EE GYK   G  +P     F QLTSW
Sbjct: 318 KNSNILKKAFEECGYKVYGGENVPYLWVHFPQLTSW 353


>sp|C5CI63|ADEC_KOSOT Adenine deaminase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=ade
           PE=3 SV=1
          Length = 577

 Score = 28.9 bits (63), Expect = 8.5,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 6/64 (9%)

Query: 19  CDQDGHPNDV-PKGHCVVYVGENRSRYIIPIT-----WLNHPKFKNLLEKAAEEYGYKHD 72
           C  D HPND+  +GH    +     + I PIT      +N  +  NL    A   GYK D
Sbjct: 267 CTDDKHPNDILNEGHIDYMIRYAIKKGIDPITAVRAATINTARHYNLRSMGAIAPGYKAD 326

Query: 73  LGII 76
             I+
Sbjct: 327 FVIV 330


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.141    0.469 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,539,986
Number of Sequences: 539616
Number of extensions: 1523135
Number of successful extensions: 2932
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2922
Number of HSP's gapped (non-prelim): 11
length of query: 92
length of database: 191,569,459
effective HSP length: 62
effective length of query: 30
effective length of database: 158,113,267
effective search space: 4743398010
effective search space used: 4743398010
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)