Query 040904
Match_columns 92
No_of_seqs 121 out of 599
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 21:05:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040904.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/040904hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2bkfa1 d.15.2.2 (A:1-85) Next 64.3 8.4 0.00061 22.9 5.3 52 33-86 7-67 (85)
2 d1unda_ a.14.1.1 (A:) Advillin 53.4 1.7 0.00013 22.4 0.5 18 50-67 1-18 (36)
3 d1z3xa2 a.261.1.1 (A:88-235) G 53.0 0.22 1.6E-05 33.2 -4.1 30 26-57 118-147 (148)
4 d1y6ia2 a.261.1.1 (A:83-233) M 51.3 0.49 3.6E-05 31.4 -2.5 31 26-58 118-148 (151)
5 d1nn7a_ d.42.1.2 (A:) Potassiu 44.1 2.1 0.00016 25.9 -0.1 55 33-91 2-58 (105)
6 d1tjya_ c.93.1.1 (A:) AI-2 rec 42.5 15 0.0011 23.3 4.0 30 41-70 3-35 (316)
7 d1y74b1 a.194.1.1 (B:83-132) P 38.5 5.8 0.00042 21.7 1.2 20 49-68 26-49 (50)
8 d1ip9a_ d.15.2.2 (A:) Bud emer 35.6 27 0.0019 19.9 4.1 45 35-83 17-70 (85)
9 d1yu5x1 a.14.1.1 (X:10-76) Vil 32.4 5.5 0.0004 22.9 0.4 19 49-67 31-49 (67)
10 d1t1da_ d.42.1.2 (A:) Shaker p 30.5 9.5 0.00069 22.6 1.4 55 33-91 3-60 (100)
11 d1qusa_ d.2.1.6 (A:) 36 kDa so 30.4 15 0.0011 26.3 2.8 24 48-71 13-36 (322)
12 d1dkgd1 c.55.1.1 (D:3-185) Hea 27.3 15 0.0011 22.9 2.0 52 30-85 96-148 (183)
13 d1ujsa_ a.14.1.1 (A:) Actin-bi 26.4 8.4 0.00061 23.2 0.5 20 48-67 45-64 (88)
14 d1vi7a2 d.58.11.2 (A:138-208) 26.0 46 0.0033 17.6 4.3 49 41-89 2-56 (71)
15 d1qzpa_ a.14.1.1 (A:) Dematin 25.4 5.8 0.00043 22.8 -0.3 19 49-67 32-50 (68)
16 d1lo7a_ d.38.1.1 (A:) 4-hydrox 23.3 24 0.0017 20.3 2.3 20 48-67 18-37 (140)
17 d1yu8x1 a.14.1.1 (X:42-76) Vil 23.1 10 0.00075 19.1 0.4 17 51-67 1-17 (35)
18 d3buxb3 d.93.1.1 (B:264-351) C 23.0 32 0.0023 20.4 2.8 36 30-67 37-73 (88)
19 d3d37a1 b.106.1.1 (A:6-178) Ba 22.9 28 0.002 21.4 2.7 23 54-77 145-171 (173)
20 d1mlaa1 c.19.1.1 (A:3-127,A:19 22.3 14 0.00099 24.4 1.0 20 51-70 22-41 (235)
21 d1t2da2 d.162.1.1 (A:151-315) 20.8 70 0.0051 19.3 4.4 32 33-66 126-157 (165)
22 d1oeyj_ d.15.2.2 (J:) Neutroph 20.7 25 0.0018 21.7 1.9 29 41-69 18-46 (105)
23 d1bupa1 c.55.1.1 (A:4-188) Hea 20.0 34 0.0025 21.1 2.6 34 51-84 116-150 (185)
No 1
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.26 E-value=8.4 Score=22.94 Aligned_cols=52 Identities=2% Similarity=0.082 Sum_probs=37.6
Q ss_pred EEEEEcCCceEEEEeccCCCcHHHHHHHHHHHHhcCcc--------CCC-cEEecCcHHHHHH
Q 040904 33 CVVYVGENRSRYIIPITWLNHPKFKNLLEKAAEEYGYK--------HDL-GIILPCDERVFRQ 86 (92)
Q Consensus 33 ~~VyVG~~~~RfvVp~~~L~hP~F~~LL~~aeeEfG~~--------~~g-~L~IPC~~~~F~~ 86 (92)
+-|..|++..||.++.. +++.|.+|..+-+.-||.+ .++ -++|.|+++.=|.
T Consensus 7 vKvtf~~dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E~ 67 (85)
T d2bkfa1 7 LNVTFKNEIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEA 67 (85)
T ss_dssp EEEEETTEEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHHH
T ss_pred EEEEECCceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHHH
Confidence 33445778899998533 3678999999999988853 234 6899999875443
No 2
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.40 E-value=1.7 Score=22.36 Aligned_cols=18 Identities=11% Similarity=0.423 Sum_probs=16.5
Q ss_pred CCCcHHHHHHHHHHHHhc
Q 040904 50 WLNHPKFKNLLEKAAEEY 67 (92)
Q Consensus 50 ~L~hP~F~~LL~~aeeEf 67 (92)
||+.-.|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 789999999999999987
No 3
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=52.97 E-value=0.22 Score=33.16 Aligned_cols=30 Identities=23% Similarity=0.355 Sum_probs=19.0
Q ss_pred CCCCCCeEEEEEcCCceEEEEeccCCCcHHHH
Q 040904 26 NDVPKGHCVVYVGENRSRYIIPITWLNHPKFK 57 (92)
Q Consensus 26 ~~vpkG~~~VyVG~~~~RfvVp~~~L~hP~F~ 57 (92)
...|+||+|+.- ..+-.-|--..|+||.|.
T Consensus 118 l~AP~GHLP~~~--~lrg~~~~~~~l~h~a~~ 147 (148)
T d1z3xa2 118 LSAPRGHLPLTN--QLRGVQVLNALLNHPAWT 147 (148)
T ss_dssp TTSCTTCCSCCC--CTTCSHHHHHHHTCGGGG
T ss_pred CCCCCCCCCcCC--ccchHHHHHHHhcCcccc
Confidence 368999999753 222333445677888763
No 4
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=51.29 E-value=0.49 Score=31.44 Aligned_cols=31 Identities=19% Similarity=0.355 Sum_probs=19.2
Q ss_pred CCCCCCeEEEEEcCCceEEEEeccCCCcHHHHH
Q 040904 26 NDVPKGHCVVYVGENRSRYIIPITWLNHPKFKN 58 (92)
Q Consensus 26 ~~vpkG~~~VyVG~~~~RfvVp~~~L~hP~F~~ 58 (92)
..+|+||+|+.-.--.-| +--+.|+||.|.+
T Consensus 118 l~AP~GHLP~~~~lrG~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 118 LSAPQGHLPLLNQLRGVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp TTSCTTCCSCCCCTTCTH--HHHHHHTSTHHHH
T ss_pred CCCCCCCCCccchhhhHH--HHHHHHcCcchhh
Confidence 368999999864211011 3334788998864
No 5
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=44.11 E-value=2.1 Score=25.87 Aligned_cols=55 Identities=18% Similarity=0.248 Sum_probs=36.6
Q ss_pred EEEEEcCCceEEEEeccCC-CcHHHHHHHHHHH-HhcCccCCCcEEecCcHHHHHHHHHhh
Q 040904 33 CVVYVGENRSRYIIPITWL-NHPKFKNLLEKAA-EEYGYKHDLGIILPCDERVFRQLTSWL 91 (92)
Q Consensus 33 ~~VyVG~~~~RfvVp~~~L-~hP~F~~LL~~ae-eEfG~~~~g~L~IPC~~~~F~~~l~~l 91 (92)
+.+.||. ++|.+..+-| ++|.. +|.... ..+--+.+|.+-|--+...|++||..|
T Consensus 2 I~LNVGG--~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~yl 58 (105)
T d1nn7a_ 2 IVLNVSG--TRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNFY 58 (105)
T ss_dssp EEEEETT--EEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHH
T ss_pred EEEEECC--EEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHHH
Confidence 5677886 6999988876 45531 122222 222224567899999999999999754
No 6
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=42.50 E-value=15 Score=23.31 Aligned_cols=30 Identities=13% Similarity=0.059 Sum_probs=22.7
Q ss_pred ceEEEEeccCCCcHHHHHHHH---HHHHhcCcc
Q 040904 41 RSRYIIPITWLNHPKFKNLLE---KAAEEYGYK 70 (92)
Q Consensus 41 ~~RfvVp~~~L~hP~F~~LL~---~aeeEfG~~ 70 (92)
.+|..+=+..++||.|..+.+ ++++++|++
T Consensus 3 ~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 3 AERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 367777788999999998855 455678874
No 7
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.50 E-value=5.8 Score=21.67 Aligned_cols=20 Identities=40% Similarity=0.642 Sum_probs=14.9
Q ss_pred cCCCcHHHHHHHHH----HHHhcC
Q 040904 49 TWLNHPKFKNLLEK----AAEEYG 68 (92)
Q Consensus 49 ~~L~hP~F~~LL~~----aeeEfG 68 (92)
..|+.|.|++||.- |.+-||
T Consensus 26 ~lL~~PH~~aLL~aHD~VA~k~Y~ 49 (50)
T d1y74b1 26 RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCHHHHHHHHHHHHHHHHhcc
Confidence 35789999999974 555665
No 8
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=35.60 E-value=27 Score=19.88 Aligned_cols=45 Identities=20% Similarity=0.239 Sum_probs=33.3
Q ss_pred EEEcCCceEEEEeccCCCcHHHHHHHHHHHHhcCcc--------CCC-cEEecCcHHH
Q 040904 35 VYVGENRSRYIIPITWLNHPKFKNLLEKAAEEYGYK--------HDL-GIILPCDERV 83 (92)
Q Consensus 35 VyVG~~~~RfvVp~~~L~hP~F~~LL~~aeeEfG~~--------~~g-~L~IPC~~~~ 83 (92)
|+-+++..||.||.+ ..|.+|.++-++-|+-. .+| .++|-|+.+.
T Consensus 17 v~~~~D~~~~~l~~~----it~~dL~~kI~~rf~~~~~~lkY~Dedgd~v~i~sD~Dl 70 (85)
T d1ip9a_ 17 FYYKDDIFALMLKGD----TTYKELRSKIAPRIDTDNFKLQTKLFDGSGEEIKTDSQV 70 (85)
T ss_dssp ECBTTCCEEEEECSC----CCHHHHHHHHHHHHTSSCEEEEECCSSSCCSCCCSHHHH
T ss_pred EEECCcEEEEEeCCC----CCHHHHHHHHHHHhCCCceEEEEEcCCCCEEEEeCHHHH
Confidence 344788899999854 45899999988888632 345 6788898865
No 9
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=32.37 E-value=5.5 Score=22.89 Aligned_cols=19 Identities=16% Similarity=0.384 Sum_probs=18.0
Q ss_pred cCCCcHHHHHHHHHHHHhc
Q 040904 49 TWLNHPKFKNLLEKAAEEY 67 (92)
Q Consensus 49 ~~L~hP~F~~LL~~aeeEf 67 (92)
.||+.-.|++++.++.+||
T Consensus 31 ~yLsd~dF~~vFgms~~eF 49 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 7999999999999999997
No 10
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=30.54 E-value=9.5 Score=22.62 Aligned_cols=55 Identities=16% Similarity=0.217 Sum_probs=36.3
Q ss_pred EEEEEcCCceEEEEeccCCCc-H--HHHHHHHHHHHhcCccCCCcEEecCcHHHHHHHHHhh
Q 040904 33 CVVYVGENRSRYIIPITWLNH-P--KFKNLLEKAAEEYGYKHDLGIILPCDERVFRQLTSWL 91 (92)
Q Consensus 33 ~~VyVG~~~~RfvVp~~~L~h-P--~F~~LL~~aeeEfG~~~~g~L~IPC~~~~F~~~l~~l 91 (92)
+.+-||. ++|.+..+-|.. | .+..|..... .+ -+.+|.+-|--+...|++||.-+
T Consensus 3 I~LNVGG--~~f~t~~~tL~~~p~s~l~~l~~~~~-~~-~~~~g~~FiDRdp~~F~~IL~fl 60 (100)
T d1t1da_ 3 VVINVSG--LRFETQLKTLNQFPDTLLGNPQKRNR-YY-DPLRNEYFFDRNRPSFDAILYFY 60 (100)
T ss_dssp EEEEETT--EEEEEEHHHHHTSTTSTTTCHHHHGG-GE-ETTTTEEEECSCSTTHHHHHHHH
T ss_pred EEEEECC--EEEEEeHHHHhhCCCchhHHHHhCCC-cC-CCCCCeEEEecCHHHHHHHHHHH
Confidence 4577886 699998776644 4 3333332211 11 24567899999999999999754
No 11
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=30.42 E-value=15 Score=26.30 Aligned_cols=24 Identities=17% Similarity=0.473 Sum_probs=21.7
Q ss_pred ccCCCcHHHHHHHHHHHHhcCccC
Q 040904 48 ITWLNHPKFKNLLEKAAEEYGYKH 71 (92)
Q Consensus 48 ~~~L~hP~F~~LL~~aeeEfG~~~ 71 (92)
-+|.+||.+++++++..+++||+.
T Consensus 13 ~dya~~p~v~~Fi~~la~~~G~s~ 36 (322)
T d1qusa_ 13 GDFANNPNAQQFIDKMVNKHGFDR 36 (322)
T ss_dssp STTTTCHHHHHHHHHHHHHHCCCH
T ss_pred CCcccCHHHHHHHHHHHHHhCCCH
Confidence 478999999999999999999975
No 12
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Probab=27.32 E-value=15 Score=22.91 Aligned_cols=52 Identities=15% Similarity=0.117 Sum_probs=34.1
Q ss_pred CCeEEEEEcCCceEEEEeccCCCcHHHHHHHHHHHHhcCccCCC-cEEecCcHHHHH
Q 040904 30 KGHCVVYVGENRSRYIIPITWLNHPKFKNLLEKAAEEYGYKHDL-GIILPCDERVFR 85 (92)
Q Consensus 30 kG~~~VyVG~~~~RfvVp~~~L~hP~F~~LL~~aeeEfG~~~~g-~L~IPC~~~~F~ 85 (92)
.|-..+-++. ++ +...-|-.-.++.|.+.|++.+|-+-+. +|++|+.....+
T Consensus 96 ~~~~~~~~~~--~~--~s~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~~ 148 (183)
T d1dkgd1 96 NGDAWVEVKG--QK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQ 148 (183)
T ss_dssp SSBEEEEETT--EE--ECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHH
T ss_pred CCcEEEEECC--EE--ECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHH
Confidence 4444444443 23 2445566677888889999988876655 789998765544
No 13
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.40 E-value=8.4 Score=23.23 Aligned_cols=20 Identities=15% Similarity=0.318 Sum_probs=18.4
Q ss_pred ccCCCcHHHHHHHHHHHHhc
Q 040904 48 ITWLNHPKFKNLLEKAAEEY 67 (92)
Q Consensus 48 ~~~L~hP~F~~LL~~aeeEf 67 (92)
-.||++-.|++++.++.+||
T Consensus 45 E~YLSdedF~~vFgMsr~eF 64 (88)
T d1ujsa_ 45 ERHLSQEEFYQVFGMTISEF 64 (88)
T ss_dssp GGGSCTTHHHHHHSSCHHHH
T ss_pred HhcCCHHHHHHHHCcCHHHH
Confidence 36999999999999999998
No 14
>d1vi7a2 d.58.11.2 (A:138-208) Hypothetical protein YigZ, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.96 E-value=46 Score=17.58 Aligned_cols=49 Identities=16% Similarity=0.240 Sum_probs=33.5
Q ss_pred ceEEEEeccCCCcHHHHHHHHHHH-----HhcCccCCCcEEecC-cHHHHHHHHH
Q 040904 41 RSRYIIPITWLNHPKFKNLLEKAA-----EEYGYKHDLGIILPC-DERVFRQLTS 89 (92)
Q Consensus 41 ~~RfvVp~~~L~hP~F~~LL~~ae-----eEfG~~~~g~L~IPC-~~~~F~~~l~ 89 (92)
+.+|-+.++|=....++.+|++.. ++|+-.=.-.+.||. .++.|..-+.
T Consensus 2 ~t~~~l~~dY~~~~~v~~~L~~~~~~i~~~~y~~~V~l~v~vp~~~~~~f~~~l~ 56 (71)
T d1vi7a2 2 LTEYTLQCEYHQLTGIEALLGQCDGKIINSDYQAFVLLRVALPAAKVAEFSAKLA 56 (71)
T ss_dssp CEEEEEEECTTTHHHHHHHHHHTTCEEEEEEESSSEEEEEEECSSTHHHHHHHHH
T ss_pred ceEEEEEeccccHHHHHHHHHHCCCEEEeeeeccEEEEEEEECHHHHHHHHHHHH
Confidence 468999999999999999999875 355532222345554 4666666553
No 15
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.42 E-value=5.8 Score=22.85 Aligned_cols=19 Identities=21% Similarity=0.468 Sum_probs=17.9
Q ss_pred cCCCcHHHHHHHHHHHHhc
Q 040904 49 TWLNHPKFKNLLEKAAEEY 67 (92)
Q Consensus 49 ~~L~hP~F~~LL~~aeeEf 67 (92)
.||+.-.|++++.++.+||
T Consensus 32 ~yLsd~dF~~vFgms~~eF 50 (68)
T d1qzpa_ 32 RHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 7999999999999999997
No 16
>d1lo7a_ d.38.1.1 (A:) 4-hydroxybenzoyl-CoA thioesterase {Pseudomonas sp., CBS-3 [TaxId: 306]}
Probab=23.27 E-value=24 Score=20.29 Aligned_cols=20 Identities=20% Similarity=0.416 Sum_probs=17.8
Q ss_pred ccCCCcHHHHHHHHHHHHhc
Q 040904 48 ITWLNHPKFKNLLEKAAEEY 67 (92)
Q Consensus 48 ~~~L~hP~F~~LL~~aeeEf 67 (92)
...+||+.+...++.|.++|
T Consensus 18 ~G~v~~~~Y~~~~e~ar~~~ 37 (140)
T d1lo7a_ 18 AGIVWYPNYHRWLDAASRNY 37 (140)
T ss_dssp TSSBCTHHHHHHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHHHHhh
Confidence 46789999999999999976
No 17
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=23.06 E-value=10 Score=19.06 Aligned_cols=17 Identities=18% Similarity=0.434 Sum_probs=13.7
Q ss_pred CCcHHHHHHHHHHHHhc
Q 040904 51 LNHPKFKNLLEKAAEEY 67 (92)
Q Consensus 51 L~hP~F~~LL~~aeeEf 67 (92)
|+.-.|++++.++.+||
T Consensus 1 Lsd~dF~~vfgmsr~eF 17 (35)
T d1yu8x1 1 LSDEDFKAVFGMTRSAF 17 (35)
T ss_dssp SCHHHHHHHHSSCHHHH
T ss_pred CCHHHHHHHHCCCHHHH
Confidence 56677888888888887
No 18
>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.01 E-value=32 Score=20.44 Aligned_cols=36 Identities=25% Similarity=0.444 Sum_probs=25.9
Q ss_pred CCeEEE-EEcCCceEEEEeccCCCcHHHHHHHHHHHHhc
Q 040904 30 KGHCVV-YVGENRSRYIIPITWLNHPKFKNLLEKAAEEY 67 (92)
Q Consensus 30 kG~~~V-yVG~~~~RfvVp~~~L~hP~F~~LL~~aeeEf 67 (92)
-|.-|+ ||-.+ .=++-+-=.|-|++|+|++-++|-|
T Consensus 37 lGQWAIGyvt~d--g~IlQTIp~nk~L~qaLidG~reGf 73 (88)
T d3buxb3 37 LGQWAIGYVTAD--GNILQTIPHNKPLFQALIDGFREGF 73 (88)
T ss_dssp TTSEEEEEECTT--SCEEEECCSSCCHHHHHHHHHHHTS
T ss_pred ccceeeeeeccC--CceeeeccCccHHHHHHHhccccee
Confidence 344444 66554 2356666789999999999999976
No 19
>d3d37a1 b.106.1.1 (A:6-178) Baseplate protein gpP {Neisseria meningitidis [TaxId: 487]}
Probab=22.89 E-value=28 Score=21.38 Aligned_cols=23 Identities=17% Similarity=0.333 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHhcC----ccCCCcEEe
Q 040904 54 PKFKNLLEKAAEEYG----YKHDLGIIL 77 (92)
Q Consensus 54 P~F~~LL~~aeeEfG----~~~~g~L~I 77 (92)
..|.- |++.+++.| |+++|.|+|
T Consensus 145 Td~~f-l~Rla~~~G~~~~~e~dG~Lv~ 171 (173)
T d3d37a1 145 TVWQA-LTHIANSVGLHPWLEPDGTLVV 171 (173)
T ss_dssp BHHHH-HHHHHHHTTCEEEECTTSCEEE
T ss_pred CHHHH-HHHHHHHCCCEEEECCCceEEe
Confidence 34444 444444445 678998876
No 20
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]}
Probab=22.28 E-value=14 Score=24.43 Aligned_cols=20 Identities=20% Similarity=0.426 Sum_probs=17.5
Q ss_pred CCcHHHHHHHHHHHHhcCcc
Q 040904 51 LNHPKFKNLLEKAAEEYGYK 70 (92)
Q Consensus 51 L~hP~F~~LL~~aeeEfG~~ 70 (92)
-++|.|++.++++.+.+|++
T Consensus 22 ~~~p~~r~~~~~~~~~l~~~ 41 (235)
T d1mlaa1 22 ASYPIVEETFAEASAALGYD 41 (235)
T ss_dssp HHCHHHHHHHHHHHHHHTSC
T ss_pred HCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999998874
No 21
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=20.85 E-value=70 Score=19.35 Aligned_cols=32 Identities=28% Similarity=0.373 Sum_probs=23.1
Q ss_pred EEEEEcCCceEEEEeccCCCcHHHHHHHHHHHHh
Q 040904 33 CVVYVGENRSRYIIPITWLNHPKFKNLLEKAAEE 66 (92)
Q Consensus 33 ~~VyVG~~~~RfvVp~~~L~hP~F~~LL~~aeeE 66 (92)
+||-+|.+--.=++++. |+ +.=+++|++|++|
T Consensus 126 ~Pv~lg~~Gv~~i~~l~-L~-~~E~~~L~~s~~~ 157 (165)
T d1t2da2 126 TPVVLGANGVEQVIELQ-LN-SEEKAKFDEAIAE 157 (165)
T ss_dssp EEEEEETTEEEEECCCC-CC-HHHHHHHHHHHHH
T ss_pred eeEEEcCCceEEEeCCC-CC-HHHHHHHHHHHHH
Confidence 46667876556678876 65 6678888888876
No 22
>d1oeyj_ d.15.2.2 (J:) Neutrophil cytosol factor 4 (p40phox component of NADPH oxidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.68 E-value=25 Score=21.71 Aligned_cols=29 Identities=21% Similarity=0.258 Sum_probs=24.8
Q ss_pred ceEEEEeccCCCcHHHHHHHHHHHHhcCc
Q 040904 41 RSRYIIPITWLNHPKFKNLLEKAAEEYGY 69 (92)
Q Consensus 41 ~~RfvVp~~~L~hP~F~~LL~~aeeEfG~ 69 (92)
.+=.-|--++-..|.|++||..-..+|+=
T Consensus 18 ~rDI~veedl~~~P~ykdLl~lmr~~f~~ 46 (105)
T d1oeyj_ 18 IKDIAVEEDLSSTPLLKDLLELTRREFQR 46 (105)
T ss_dssp EEEEEECSCTTCCCCHHHHHHHHHHHHCC
T ss_pred eeeEEEccccccCccHHHHHHHHHHHhcc
Confidence 35567778889999999999999999974
No 23
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.04 E-value=34 Score=21.14 Aligned_cols=34 Identities=12% Similarity=0.000 Sum_probs=24.1
Q ss_pred CCcHHHHHHHHHHHHhcCccCCC-cEEecCcHHHH
Q 040904 51 LNHPKFKNLLEKAAEEYGYKHDL-GIILPCDERVF 84 (92)
Q Consensus 51 L~hP~F~~LL~~aeeEfG~~~~g-~L~IPC~~~~F 84 (92)
|---.++.|.+.|++.+|-+-.. +|++|+....-
T Consensus 116 l~a~~l~~l~~~a~~~~~~~~~~~VitvPa~f~~~ 150 (185)
T d1bupa1 116 VSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDS 150 (185)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHH
T ss_pred HHHHHHHHHHHHHHHHhCCCcCcEEEEECCCCCHH
Confidence 33446777888888888876555 78999865443
Done!