Query 040908
Match_columns 790
No_of_seqs 710 out of 5276
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 21:08:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040908.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040908hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 4.6E-53 1.6E-57 456.7 21.6 261 446-725 41-320 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 2.1E-53 7.2E-58 453.2 18.2 259 446-723 13-288 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 5.1E-53 1.7E-57 452.2 20.9 259 446-723 26-305 (308)
4 3omv_A RAF proto-oncogene seri 100.0 5.3E-52 1.8E-56 442.6 22.1 259 444-722 34-298 (307)
5 3hmm_A TGF-beta receptor type- 100.0 5.9E-51 2E-55 436.7 18.0 266 446-723 3-296 (303)
6 4fih_A Serine/threonine-protei 100.0 4.5E-50 1.5E-54 433.2 21.9 249 446-717 74-323 (346)
7 4ase_A Vascular endothelial gr 100.0 1.3E-50 4.3E-55 441.3 16.3 270 436-723 54-346 (353)
8 4b9d_A Serine/threonine-protei 100.0 3.6E-50 1.2E-54 434.5 18.2 250 446-717 24-276 (350)
9 3fpq_A Serine/threonine-protei 100.0 2.1E-49 7E-54 419.6 21.5 247 448-717 28-282 (290)
10 4g3f_A NF-kappa-beta-inducing 100.0 1.3E-49 4.4E-54 428.3 20.0 253 445-723 57-315 (336)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.1E-49 7.2E-54 421.7 18.2 247 446-716 32-283 (311)
12 4fie_A Serine/threonine-protei 100.0 6.3E-49 2.2E-53 434.5 22.3 250 445-717 150-400 (423)
13 3hyh_A Carbon catabolite-derep 100.0 1.8E-48 6.2E-53 408.8 20.5 245 446-717 13-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.2E-48 4.2E-53 415.7 15.4 242 446-712 24-271 (304)
15 4g31_A Eukaryotic translation 100.0 8.2E-47 2.8E-51 402.9 19.1 250 446-717 5-279 (299)
16 2qkw_B Protein kinase; three-h 100.0 5.7E-46 1.9E-50 402.0 22.6 287 436-725 29-316 (321)
17 3uim_A Brassinosteroid insensi 100.0 8.3E-46 2.8E-50 401.4 22.9 291 433-723 17-310 (326)
18 4b99_A Mitogen-activated prote 100.0 4.7E-44 1.6E-48 396.1 24.6 260 445-717 53-344 (398)
19 4f9c_A Cell division cycle 7-r 100.0 6.6E-44 2.3E-48 390.6 23.6 200 443-654 18-251 (361)
20 3uto_A Twitchin; kinase, muscl 100.0 2E-43 6.9E-48 409.7 22.7 252 445-717 156-410 (573)
21 3v5w_A G-protein coupled recep 100.0 5.4E-43 1.9E-47 403.8 23.5 248 446-717 189-449 (689)
22 3s95_A LIMK-1, LIM domain kina 100.0 2.6E-42 8.7E-47 371.3 20.9 259 445-723 9-281 (310)
23 3fxz_A Serine/threonine-protei 100.0 1.4E-41 4.7E-46 363.6 24.1 250 445-717 19-269 (297)
24 2nru_A Interleukin-1 receptor- 100.0 5.6E-41 1.9E-45 360.0 27.5 282 433-723 12-305 (307)
25 2c30_A Serine/threonine-protei 100.0 4E-41 1.4E-45 364.2 26.4 263 432-717 21-294 (321)
26 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.5E-41 8.4E-46 355.5 22.8 258 444-724 6-264 (268)
27 3kul_A Ephrin type-A receptor 100.0 1.2E-41 4E-46 369.0 20.9 258 445-724 48-313 (325)
28 3ugc_A Tyrosine-protein kinase 100.0 1.9E-42 6.5E-47 369.5 13.5 264 445-723 9-290 (295)
29 3p86_A Serine/threonine-protei 100.0 8.7E-42 3E-46 367.3 18.7 270 436-724 27-298 (309)
30 3soc_A Activin receptor type-2 100.0 1E-41 3.5E-46 368.9 19.1 267 445-723 23-317 (322)
31 2psq_A Fibroblast growth facto 100.0 2.4E-41 8.1E-46 373.3 21.9 260 445-723 80-363 (370)
32 4hcu_A Tyrosine-protein kinase 100.0 1.8E-41 6.2E-46 356.8 19.5 256 445-723 9-265 (269)
33 4eqm_A Protein kinase; transfe 100.0 2.8E-41 9.4E-46 360.7 21.0 262 445-725 10-276 (294)
34 1qcf_A Haematopoetic cell kina 100.0 2.2E-41 7.5E-46 383.9 19.4 261 441-724 183-444 (454)
35 3fe3_A MAP/microtubule affinit 100.0 9.1E-41 3.1E-45 362.3 23.3 247 445-717 14-264 (328)
36 3cbl_A C-FES, proto-oncogene t 100.0 1.3E-41 4.6E-46 376.3 17.1 257 444-722 112-372 (377)
37 2qol_A Ephrin receptor; recept 100.0 2.4E-41 8E-46 373.7 18.7 258 445-724 44-309 (373)
38 3zgw_A Maternal embryonic leuc 100.0 3.9E-41 1.3E-45 367.7 20.1 250 444-717 8-260 (347)
39 4aw2_A Serine/threonine-protei 100.0 1.6E-41 5.5E-46 381.5 17.2 263 437-717 65-338 (437)
40 3tki_A Serine/threonine-protei 100.0 8.7E-41 3E-45 361.9 21.9 252 445-717 6-261 (323)
41 3gen_A Tyrosine-protein kinase 100.0 6.6E-41 2.3E-45 355.2 20.0 257 444-723 22-279 (283)
42 1opk_A P150, C-ABL, proto-onco 100.0 5.7E-41 1.9E-45 384.4 20.3 260 443-724 217-478 (495)
43 3vhe_A Vascular endothelial gr 100.0 1.9E-41 6.7E-46 372.0 15.6 271 435-723 11-354 (359)
44 3q4u_A Activin receptor type-1 100.0 1.5E-40 5E-45 355.4 21.9 264 444-722 6-300 (301)
45 3dtc_A Mitogen-activated prote 100.0 1.1E-40 3.9E-45 350.9 20.2 253 445-721 6-270 (271)
46 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1E-40 3.5E-45 378.2 21.1 260 442-724 180-440 (452)
47 4euu_A Serine/threonine-protei 100.0 1.2E-39 4.2E-44 352.0 28.5 272 445-722 8-307 (319)
48 2izr_A Casein kinase I isoform 100.0 2.5E-40 8.5E-45 359.2 22.6 260 445-723 8-280 (330)
49 2yab_A Death-associated protei 100.0 4.1E-40 1.4E-44 361.7 23.6 252 444-717 10-272 (361)
50 1csn_A Casein kinase-1; phosph 100.0 4.7E-40 1.6E-44 351.0 23.2 262 445-724 9-283 (298)
51 3poz_A Epidermal growth factor 100.0 1.8E-40 6.3E-45 359.9 20.1 257 445-724 14-278 (327)
52 1luf_A Muscle-specific tyrosin 100.0 1.4E-40 4.7E-45 362.7 19.1 265 441-724 42-335 (343)
53 2y0a_A Death-associated protei 100.0 4.3E-40 1.5E-44 356.8 22.4 251 445-717 10-271 (326)
54 1o6l_A RAC-beta serine/threoni 100.0 4.2E-40 1.4E-44 358.3 22.4 248 445-717 4-260 (337)
55 3niz_A Rhodanese family protei 100.0 3.2E-40 1.1E-44 355.4 21.2 264 444-717 19-300 (311)
56 1mp8_A Focal adhesion kinase 1 100.0 2.4E-40 8.3E-45 350.7 19.7 257 444-723 13-275 (281)
57 3tt0_A Basic fibroblast growth 100.0 2.6E-40 9E-45 366.6 20.8 262 444-724 67-352 (382)
58 1tki_A Titin; serine kinase, m 100.0 3.4E-40 1.2E-44 356.8 20.9 251 445-717 4-257 (321)
59 3lxl_A Tyrosine-protein kinase 100.0 1.1E-40 3.6E-45 361.6 16.8 273 445-724 22-303 (327)
60 1k9a_A Carboxyl-terminal SRC k 100.0 4.6E-40 1.6E-44 372.6 22.7 252 444-723 191-444 (450)
61 3l9p_A Anaplastic lymphoma kin 100.0 9.6E-41 3.3E-45 368.1 16.3 261 445-724 70-345 (367)
62 1kob_A Twitchin; kinase, intra 100.0 8.2E-40 2.8E-44 362.6 23.8 252 445-717 50-304 (387)
63 3qup_A Tyrosine-protein kinase 100.0 3.3E-40 1.1E-44 356.9 19.9 267 441-726 18-300 (323)
64 3t9t_A Tyrosine-protein kinase 100.0 2.3E-40 8E-45 347.5 18.2 256 445-723 7-263 (267)
65 2ivs_A Proto-oncogene tyrosine 100.0 3.6E-40 1.2E-44 354.6 20.1 261 444-723 21-310 (314)
66 3lb7_A RAF proto-oncogene seri 100.0 5.9E-40 2E-44 352.7 21.7 260 445-724 35-300 (307)
67 3c0i_A Peripheral plasma membr 100.0 3.6E-40 1.2E-44 361.3 20.1 255 445-717 23-286 (351)
68 3v8s_A RHO-associated protein 100.0 2.8E-40 9.4E-45 368.6 19.3 259 438-717 61-329 (410)
69 3kfa_A Tyrosine-protein kinase 100.0 1.5E-40 5.3E-45 353.1 16.4 261 441-723 8-270 (288)
70 3op5_A Serine/threonine-protei 100.0 2.9E-40 1E-44 363.8 19.1 268 444-724 33-329 (364)
71 1qpc_A LCK kinase; alpha beta 100.0 3.1E-40 1.1E-44 349.2 18.5 257 444-723 11-268 (279)
72 3lxp_A Non-receptor tyrosine-p 100.0 3.2E-40 1.1E-44 356.5 18.5 267 448-723 33-309 (318)
73 1rjb_A FL cytokine receptor; k 100.0 3.5E-40 1.2E-44 359.9 19.1 264 443-724 42-334 (344)
74 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.2E-40 1.8E-44 359.8 20.1 249 444-717 21-280 (353)
75 4e5w_A Tyrosine-protein kinase 100.0 1.7E-40 5.8E-45 355.3 15.5 261 446-722 21-300 (302)
76 2vd5_A DMPK protein; serine/th 100.0 3.1E-40 1E-44 368.5 18.1 263 436-717 51-327 (412)
77 2bdw_A Hypothetical protein K1 100.0 1.4E-39 4.8E-44 357.9 22.7 253 443-717 26-284 (362)
78 2zv2_A Calcium/calmodulin-depe 100.0 7.6E-40 2.6E-44 349.9 19.9 249 445-717 12-292 (298)
79 2h8h_A Proto-oncogene tyrosine 100.0 3.8E-40 1.3E-44 381.1 18.8 261 441-724 262-523 (535)
80 3p1a_A MYT1 kinase, membrane-a 100.0 4.3E-40 1.5E-44 354.4 18.0 245 445-717 56-304 (311)
81 3qd2_B Eukaryotic translation 100.0 8.4E-40 2.9E-44 354.3 20.3 251 445-717 5-325 (332)
82 1ob3_A PFPK5, cell division co 100.0 8.2E-40 2.8E-44 348.0 19.7 262 446-717 2-280 (288)
83 3kmu_A ILK, integrin-linked ki 100.0 6.9E-40 2.4E-44 344.3 18.9 254 445-723 9-269 (271)
84 4f0f_A Serine/threonine-protei 100.0 1.1E-39 3.9E-44 346.4 20.5 254 445-721 18-286 (287)
85 1t46_A HOMO sapiens V-KIT hard 100.0 5.3E-40 1.8E-44 353.2 18.0 262 444-723 21-306 (313)
86 3dbq_A Dual specificity protei 100.0 5.8E-40 2E-44 358.4 18.5 250 445-717 8-273 (343)
87 3mdy_A Bone morphogenetic prot 100.0 3.4E-39 1.2E-43 350.6 24.5 274 436-724 27-331 (337)
88 3soa_A Calcium/calmodulin-depe 100.0 2.3E-39 7.7E-44 365.2 23.6 253 444-717 9-267 (444)
89 4dc2_A Protein kinase C IOTA t 100.0 2.3E-39 8E-44 359.2 23.3 250 445-712 51-307 (396)
90 3kex_A Receptor tyrosine-prote 100.0 4.8E-40 1.6E-44 356.3 17.4 255 446-723 13-275 (325)
91 3o0g_A Cell division protein k 100.0 2.3E-39 7.8E-44 345.2 22.2 263 446-717 2-282 (292)
92 4fr4_A YANK1, serine/threonine 100.0 2.1E-39 7.1E-44 358.4 22.5 249 446-717 15-271 (384)
93 1fot_A TPK1 delta, CAMP-depend 100.0 2.4E-39 8.3E-44 349.5 22.2 245 445-717 5-258 (318)
94 4fvq_A Tyrosine-protein kinase 100.0 2E-39 6.7E-44 344.8 21.2 252 445-724 7-275 (289)
95 2x4f_A Myosin light chain kina 100.0 1.7E-39 5.7E-44 358.8 21.3 247 450-717 93-342 (373)
96 2eva_A TAK1 kinase - TAB1 chim 100.0 1.5E-39 5.2E-44 349.5 20.4 256 445-724 7-263 (307)
97 3cc6_A Protein tyrosine kinase 100.0 1.5E-39 5.2E-44 344.4 20.2 257 444-723 10-272 (281)
98 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.3E-40 2.5E-44 356.1 17.9 246 445-717 8-258 (336)
99 2v62_A Serine/threonine-protei 100.0 2.6E-39 8.9E-44 353.5 22.0 265 445-723 36-327 (345)
100 3gxj_A TGF-beta receptor type- 100.0 7E-41 2.4E-45 358.1 9.3 265 445-724 2-297 (303)
101 3og7_A AKAP9-BRAF fusion prote 100.0 1.1E-39 3.8E-44 347.2 18.5 260 444-723 22-287 (289)
102 2pvf_A Fibroblast growth facto 100.0 2E-39 6.8E-44 352.7 20.8 262 444-724 33-318 (334)
103 1u59_A Tyrosine-protein kinase 100.0 3.9E-39 1.3E-43 342.5 22.3 256 445-723 8-271 (287)
104 2w1i_A JAK2; chromosomal rearr 100.0 3.4E-40 1.2E-44 357.5 14.4 263 445-722 40-320 (326)
105 1xjd_A Protein kinase C, theta 100.0 9.5E-40 3.2E-44 356.5 17.9 250 442-716 13-268 (345)
106 2zmd_A Dual specificity protei 100.0 1.4E-39 4.9E-44 361.6 19.4 249 446-717 56-320 (390)
107 2w4o_A Calcium/calmodulin-depe 100.0 2.1E-39 7.1E-44 354.9 20.2 251 444-717 51-305 (349)
108 2ozo_A Tyrosine-protein kinase 100.0 2.7E-39 9.4E-44 379.3 22.6 256 445-723 334-597 (613)
109 3hko_A Calcium/calmodulin-depe 100.0 2.5E-39 8.5E-44 353.2 20.8 261 441-717 21-330 (345)
110 2buj_A Serine/threonine-protei 100.0 1.3E-39 4.4E-44 351.1 18.2 264 444-724 27-306 (317)
111 4hgt_A Casein kinase I isoform 100.0 5.9E-39 2E-43 341.9 23.0 262 444-723 7-279 (296)
112 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.4E-39 1.2E-43 353.0 21.6 244 446-717 41-293 (350)
113 3uzp_A CKI-delta, CKID, casein 100.0 8E-39 2.7E-43 341.1 23.8 262 445-724 8-280 (296)
114 1p4o_A Insulin-like growth fac 100.0 1.1E-39 3.7E-44 352.5 17.3 270 436-724 15-299 (322)
115 3a8x_A Protein kinase C IOTA t 100.0 5.9E-39 2E-43 350.5 23.1 249 446-712 9-264 (345)
116 3is5_A Calcium-dependent prote 100.0 3E-39 1E-43 343.2 19.9 253 445-717 21-278 (285)
117 1u5q_A Serine/threonine protei 100.0 1.9E-39 6.5E-44 355.0 18.7 246 445-717 53-305 (348)
118 4eut_A Serine/threonine-protei 100.0 4.8E-39 1.6E-43 358.2 22.2 272 445-724 8-309 (396)
119 3kk8_A Calcium/calmodulin depe 100.0 1.1E-38 3.8E-43 338.1 24.0 251 445-717 5-261 (284)
120 3uc3_A Serine/threonine-protei 100.0 2E-39 6.7E-44 356.7 18.8 252 445-717 19-274 (361)
121 3llt_A Serine/threonine kinase 100.0 8.1E-40 2.8E-44 359.4 15.8 274 433-717 22-355 (360)
122 3g33_A Cell division protein k 100.0 2.4E-39 8.1E-44 347.8 19.0 264 444-717 7-296 (308)
123 2pmi_A Negative RE, cyclin-dep 100.0 2.5E-39 8.5E-44 349.4 19.2 266 445-717 4-293 (317)
124 3lzb_A Epidermal growth factor 100.0 2.9E-39 9.9E-44 350.5 19.8 257 445-724 14-278 (327)
125 4ejn_A RAC-alpha serine/threon 100.0 2.2E-39 7.7E-44 366.7 19.7 248 445-717 147-404 (446)
126 3f3z_A Calcium/calmodulin-depe 100.0 5.5E-39 1.9E-43 339.2 21.4 247 444-717 7-261 (277)
127 2i0e_A Protein kinase C-beta I 100.0 5.6E-39 1.9E-43 351.5 22.2 249 444-717 18-276 (353)
128 1mqb_A Ephrin type-A receptor 100.0 4.7E-39 1.6E-43 349.8 21.3 258 445-724 43-309 (333)
129 3a62_A Ribosomal protein S6 ki 100.0 3.2E-39 1.1E-43 350.1 20.0 248 445-717 16-276 (327)
130 2a2a_A Death-associated protei 100.0 5.5E-39 1.9E-43 347.2 21.7 251 445-717 11-272 (321)
131 3gni_B Strad alpha; kinase fol 100.0 7.3E-39 2.5E-43 355.9 23.0 267 445-717 24-333 (389)
132 3fdn_A Serine/threonine-protei 100.0 7E-39 2.4E-43 339.0 21.7 246 445-717 8-257 (279)
133 4agu_A Cyclin-dependent kinase 100.0 3.9E-39 1.3E-43 346.4 20.0 264 446-717 3-284 (311)
134 2wqm_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 345.2 21.1 262 446-724 32-297 (310)
135 3g2f_A Bone morphogenetic prot 100.0 5E-39 1.7E-43 349.4 20.9 267 445-725 12-319 (336)
136 2h34_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43 342.5 23.8 260 445-725 33-297 (309)
137 2xir_A Vascular endothelial gr 100.0 1.1E-39 3.8E-44 351.2 15.4 270 436-723 17-309 (316)
138 3c1x_A Hepatocyte growth facto 100.0 3.4E-39 1.1E-43 356.2 19.3 256 447-724 90-355 (373)
139 3ork_A Serine/threonine protei 100.0 1.1E-39 3.8E-44 351.1 14.8 256 445-720 11-277 (311)
140 2i1m_A Macrophage colony-stimu 100.0 1.3E-39 4.5E-44 353.7 15.5 264 441-722 41-324 (333)
141 3lm5_A Serine/threonine-protei 100.0 8.3E-39 2.8E-43 346.9 21.4 270 428-717 10-287 (327)
142 2eue_A Carbon catabolite derep 100.0 5.2E-39 1.8E-43 339.2 19.2 245 446-717 13-262 (275)
143 2jii_A Serine/threonine-protei 100.0 2.1E-39 7.1E-44 355.3 16.7 263 445-724 41-336 (352)
144 2y94_A 5'-AMP-activated protei 100.0 2.3E-38 7.7E-43 359.5 25.5 251 446-722 16-273 (476)
145 1fvr_A Tyrosine-protein kinase 100.0 5.6E-39 1.9E-43 348.0 19.5 258 446-724 25-300 (327)
146 3brb_A Proto-oncogene tyrosine 100.0 1.2E-38 4E-43 343.1 21.9 266 439-723 27-307 (313)
147 1xbb_A Tyrosine-protein kinase 100.0 1.1E-38 3.6E-43 339.9 21.2 256 444-723 14-278 (291)
148 3kn6_A Ribosomal protein S6 ki 100.0 2.4E-39 8.3E-44 350.8 16.5 254 447-717 9-270 (325)
149 3cok_A Serine/threonine-protei 100.0 6.6E-39 2.3E-43 338.8 19.4 249 445-717 10-262 (278)
150 3dls_A PAS domain-containing s 100.0 3.4E-39 1.2E-43 351.1 17.5 242 444-717 22-274 (335)
151 1b6c_B TGF-B superfamily recep 100.0 2.4E-38 8.2E-43 344.8 24.2 274 435-723 31-335 (342)
152 3bhy_A Death-associated protei 100.0 1.2E-38 4.2E-43 337.6 21.2 251 445-717 4-265 (283)
153 2ac3_A MAP kinase-interacting 100.0 3.7E-39 1.3E-43 347.4 17.5 256 445-717 11-295 (316)
154 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.3E-38 7.7E-43 348.8 23.6 254 443-723 62-338 (365)
155 2r5t_A Serine/threonine-protei 100.0 6.9E-39 2.4E-43 353.4 19.5 248 445-717 37-289 (373)
156 3pls_A Macrophage-stimulating 100.0 8.9E-39 3.1E-43 341.1 19.7 256 447-723 22-286 (298)
157 2a19_B Interferon-induced, dou 100.0 1.4E-38 4.8E-43 337.0 21.1 250 444-725 9-275 (284)
158 1vzo_A Ribosomal protein S6 ki 100.0 5.1E-39 1.7E-43 352.7 18.2 253 445-717 53-321 (355)
159 2w5a_A Serine/threonine-protei 100.0 3E-39 1E-43 341.5 15.7 260 445-721 5-271 (279)
160 3oz6_A Mitogen-activated prote 100.0 6.4E-39 2.2E-43 356.2 18.7 204 443-655 6-236 (388)
161 3f66_A Hepatocyte growth facto 100.0 1.3E-38 4.3E-43 340.2 20.3 258 445-724 24-291 (298)
162 2acx_A G protein-coupled recep 100.0 1.7E-38 5.8E-43 365.7 22.7 254 444-717 182-444 (576)
163 1x8b_A WEE1HU, WEE1-like prote 100.0 6.5E-39 2.2E-43 339.8 17.8 247 444-717 9-279 (289)
164 4fl3_A Tyrosine-protein kinase 100.0 8.1E-39 2.8E-43 376.3 20.4 247 452-722 375-629 (635)
165 3sv0_A Casein kinase I-like; t 100.0 1.7E-38 5.7E-43 361.2 22.2 262 445-724 6-278 (483)
166 2qr7_A Ribosomal protein S6 ki 100.0 1.2E-38 4E-43 347.8 20.0 252 444-717 20-277 (342)
167 1byg_A CSK, protein (C-termina 100.0 4.9E-39 1.7E-43 340.0 16.4 251 445-723 20-272 (278)
168 2yex_A Serine/threonine-protei 100.0 1.6E-38 5.4E-43 335.2 20.2 252 445-717 6-261 (276)
169 3fme_A Dual specificity mitoge 100.0 4.8E-39 1.6E-43 341.8 16.2 255 444-717 5-266 (290)
170 3ttj_A Mitogen-activated prote 100.0 2.5E-38 8.6E-43 359.2 22.6 261 445-717 61-355 (464)
171 2rku_A Serine/threonine-protei 100.0 2.3E-38 7.7E-43 337.7 20.9 248 445-717 14-265 (294)
172 3c4z_A Rhodopsin kinase; Ser/T 100.0 3E-38 1E-42 362.7 23.3 251 445-712 184-438 (543)
173 3a7i_A MST3 kinase, serine/thr 100.0 2.9E-38 1E-42 338.4 21.6 248 445-717 21-270 (303)
174 3eqc_A Dual specificity mitoge 100.0 1E-38 3.5E-43 350.7 18.6 264 445-717 32-324 (360)
175 3mtl_A Cell division protein k 100.0 2.9E-39 9.9E-44 350.0 13.7 261 446-717 2-281 (324)
176 2vgo_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 334.7 21.6 245 446-717 14-262 (284)
177 3pg1_A Mitogen-activated prote 100.0 1.3E-38 4.6E-43 350.0 18.7 269 437-717 13-316 (362)
178 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1E-38 3.5E-43 346.5 17.5 263 444-717 32-318 (329)
179 2yfx_A Tyrosine-protein kinase 100.0 6.3E-39 2.1E-43 347.6 15.7 262 444-724 28-304 (327)
180 3byv_A Rhoptry kinase; malaria 100.0 3.1E-39 1.1E-43 357.3 13.5 243 445-717 72-359 (377)
181 1nxk_A MAP kinase-activated pr 100.0 2.8E-38 9.7E-43 352.3 21.3 252 445-717 60-321 (400)
182 2owb_A Serine/threonine-protei 100.0 2.8E-38 9.6E-43 343.9 20.7 248 445-717 40-291 (335)
183 1ua2_A CAK, cell division prot 100.0 2.1E-38 7.3E-43 346.4 19.9 264 441-717 5-291 (346)
184 4aaa_A Cyclin-dependent kinase 100.0 3.3E-38 1.1E-42 342.6 21.2 265 445-717 24-306 (331)
185 1u46_A ACK-1, activated CDC42 100.0 8.8E-39 3E-43 339.9 16.1 257 445-723 17-283 (291)
186 3eb0_A Putative uncharacterize 100.0 1.2E-38 4.1E-43 353.5 17.5 265 441-717 2-321 (383)
187 3mi9_A Cell division protein k 100.0 2.8E-38 9.6E-43 346.0 20.2 261 445-717 16-311 (351)
188 3i6u_A CDS1, serine/threonine- 100.0 1E-38 3.5E-43 358.1 17.1 253 443-717 132-399 (419)
189 1t4h_A Serine/threonine-protei 100.0 5E-38 1.7E-42 334.3 21.3 249 446-717 26-282 (290)
190 3ll6_A Cyclin G-associated kin 100.0 6.5E-39 2.2E-43 348.0 14.7 259 444-724 26-308 (337)
191 2clq_A Mitogen-activated prote 100.0 6.5E-38 2.2E-42 333.9 22.1 252 447-717 23-278 (295)
192 2y7j_A Phosphorylase B kinase 100.0 1.5E-37 5E-42 342.3 25.5 259 437-717 85-359 (365)
193 2jam_A Calcium/calmodulin-depe 100.0 3.2E-38 1.1E-42 338.3 19.0 256 444-722 7-268 (304)
194 2vwi_A Serine/threonine-protei 100.0 1.8E-38 6.2E-43 339.3 17.1 262 442-717 11-287 (303)
195 3an0_A Dual specificity mitoge 100.0 9.5E-39 3.3E-43 348.1 15.1 255 444-717 49-310 (340)
196 3nsz_A CK II alpha, casein kin 100.0 8.6E-38 2.9E-42 338.8 22.6 256 446-717 36-319 (330)
197 2h6d_A 5'-AMP-activated protei 100.0 4.9E-38 1.7E-42 331.7 19.7 247 445-717 10-261 (276)
198 3com_A Serine/threonine-protei 100.0 9.3E-38 3.2E-42 336.1 22.2 252 443-717 26-278 (314)
199 3q60_A ROP5B; pseudokinase, tr 100.0 2.1E-38 7.1E-43 350.0 17.0 254 445-717 61-352 (371)
200 2j7t_A Serine/threonine-protei 100.0 2.7E-38 9.1E-43 338.3 17.3 253 444-717 17-275 (302)
201 3rp9_A Mitogen-activated prote 100.0 5.1E-38 1.7E-42 356.8 20.3 194 445-646 52-280 (458)
202 3lij_A Calcium/calmodulin depe 100.0 1E-37 3.4E-42 357.7 22.8 250 445-717 36-291 (494)
203 1phk_A Phosphorylase kinase; g 100.0 1.9E-37 6.5E-42 331.0 23.4 252 444-717 15-283 (298)
204 1wak_A Serine/threonine-protei 100.0 2.3E-37 8E-42 343.9 24.5 263 445-717 36-391 (397)
205 2pml_X PFPK7, Ser/Thr protein 100.0 7.4E-38 2.5E-42 342.0 19.8 258 445-717 30-322 (348)
206 1j1b_A Glycogen synthase kinas 100.0 1.5E-37 5.2E-42 348.7 22.7 265 446-722 54-343 (420)
207 3kvw_A DYRK2, dual specificity 100.0 2.5E-37 8.6E-42 347.8 24.3 201 444-655 95-304 (429)
208 1cm8_A Phosphorylated MAP kina 100.0 3.1E-37 1.1E-41 340.0 24.4 259 445-722 24-314 (367)
209 3mwu_A Calmodulin-domain prote 100.0 1.2E-37 4E-42 356.5 21.8 255 444-721 20-282 (486)
210 3nyv_A Calmodulin-domain prote 100.0 7.1E-38 2.4E-42 358.2 19.8 251 444-717 24-281 (484)
211 3n9x_A Phosphotransferase; mal 100.0 1.7E-37 5.8E-42 349.7 22.4 199 445-651 25-253 (432)
212 3q5i_A Protein kinase; CDPK, m 100.0 1.2E-37 4.3E-42 357.9 21.7 255 444-721 34-307 (504)
213 2xrw_A Mitogen-activated prote 100.0 2.9E-37 1E-41 340.7 23.8 261 445-717 24-318 (371)
214 3cek_A Dual specificity protei 100.0 2.1E-38 7.1E-43 341.3 14.1 260 435-717 17-292 (313)
215 2j0j_A Focal adhesion kinase 1 100.0 6.7E-38 2.3E-42 369.9 19.6 261 440-723 384-650 (656)
216 3pfq_A PKC-B, PKC-beta, protei 100.0 1.2E-37 4.2E-42 368.8 21.7 249 444-717 339-597 (674)
217 2x7f_A TRAF2 and NCK-interacti 100.0 3.2E-38 1.1E-42 341.6 15.3 260 436-717 14-286 (326)
218 1zy4_A Serine/threonine-protei 100.0 1.7E-37 5.7E-42 331.5 20.3 252 444-717 4-283 (303)
219 1z57_A Dual specificity protei 100.0 9.3E-37 3.2E-41 331.1 26.4 262 445-717 13-328 (339)
220 2r3i_A Cell division protein k 100.0 1.7E-37 6E-42 331.4 20.3 260 446-717 3-283 (299)
221 2ycf_A Serine/threonine-protei 100.0 6.8E-38 2.3E-42 338.8 17.0 252 444-717 8-274 (322)
222 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.3E-38 4.3E-43 343.5 11.2 264 438-725 25-303 (319)
223 3qyz_A Mitogen-activated prote 100.0 5.1E-37 1.7E-41 337.9 24.2 262 444-717 25-313 (364)
224 2wtk_C Serine/threonine-protei 100.0 2.8E-37 9.5E-42 330.8 21.2 250 445-717 4-263 (305)
225 1blx_A Cyclin-dependent kinase 100.0 8E-38 2.8E-42 338.3 16.8 264 444-717 9-296 (326)
226 3e3p_A Protein kinase, putativ 100.0 2.8E-37 9.7E-42 339.0 21.3 270 439-717 16-314 (360)
227 2fst_X Mitogen-activated prote 100.0 2.1E-37 7.1E-42 341.2 19.5 255 445-717 28-311 (367)
228 4e7w_A Glycogen synthase kinas 100.0 8.5E-38 2.9E-42 347.8 16.5 261 445-717 39-321 (394)
229 2vx3_A Dual specificity tyrosi 100.0 1.1E-36 3.7E-41 337.5 25.3 210 437-655 45-263 (382)
230 2i6l_A Mitogen-activated prote 100.0 3.1E-37 1.1E-41 332.2 19.9 264 445-717 10-305 (320)
231 3rgf_A Cyclin-dependent kinase 100.0 3E-37 1E-41 344.8 20.1 204 445-654 19-240 (405)
232 3aln_A Dual specificity mitoge 100.0 2.3E-37 7.9E-42 335.2 17.3 256 445-717 21-285 (327)
233 4exu_A Mitogen-activated prote 100.0 7.5E-37 2.5E-41 337.5 21.5 254 445-717 41-323 (371)
234 2b9h_A MAP kinase FUS3, mitoge 100.0 2.6E-37 8.9E-42 338.3 17.3 263 444-717 9-305 (353)
235 2rio_A Serine/threonine-protei 100.0 9.8E-37 3.3E-41 343.6 22.3 253 446-717 15-295 (434)
236 2wei_A Calmodulin-domain prote 100.0 1.1E-36 3.8E-41 323.6 20.9 253 442-717 18-276 (287)
237 2eu9_A Dual specificity protei 100.0 4.4E-36 1.5E-40 328.2 26.2 262 445-717 18-333 (355)
238 1q8y_A SR protein kinase; tran 100.0 1E-36 3.5E-41 336.1 21.0 263 445-717 18-333 (373)
239 3coi_A Mitogen-activated prote 100.0 7.9E-37 2.7E-41 334.8 19.3 256 445-717 23-305 (353)
240 2iwi_A Serine/threonine-protei 100.0 4E-37 1.4E-41 331.0 15.8 245 440-717 25-283 (312)
241 3a99_A Proto-oncogene serine/t 100.0 2.4E-37 8.1E-42 334.4 13.1 245 440-717 37-293 (320)
242 3fhr_A MAP kinase-activated pr 100.0 1.7E-36 5.8E-41 330.0 17.8 258 444-723 26-295 (336)
243 2dyl_A Dual specificity mitoge 100.0 3.8E-36 1.3E-40 323.8 19.5 252 445-717 24-283 (318)
244 3p23_A Serine/threonine-protei 100.0 4.7E-36 1.6E-40 337.4 19.1 249 445-717 23-283 (432)
245 2pzi_A Probable serine/threoni 100.0 3.6E-35 1.2E-39 349.4 21.3 238 445-721 79-325 (681)
246 3qa8_A MGC80376 protein; kinas 100.0 5.4E-36 1.8E-40 348.2 10.1 259 445-714 13-294 (676)
247 3uqc_A Probable conserved tran 100.0 1.2E-34 4.1E-39 308.0 18.3 230 445-724 30-265 (286)
248 3dzo_A Rhoptry kinase domain; 100.0 2.1E-35 7.3E-40 330.5 10.5 243 445-717 77-363 (413)
249 3m2w_A MAP kinase-activated pr 100.0 1.1E-33 3.6E-38 302.6 21.7 233 445-723 16-264 (299)
250 2vuw_A Serine/threonine-protei 100.0 1.1E-34 3.9E-39 315.4 10.9 240 445-716 19-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 1E-28 3.6E-33 286.2 5.1 185 453-649 241-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 8.2E-26 2.8E-30 260.5 10.3 184 449-650 339-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 1.4E-22 4.8E-27 214.3 13.4 152 439-623 83-252 (282)
254 3rgz_A Protein brassinosteroid 99.8 9.6E-21 3.3E-25 228.4 13.3 168 1-168 469-714 (768)
255 3rgz_A Protein brassinosteroid 99.8 1.5E-20 5E-25 226.8 13.9 103 2-104 446-555 (768)
256 1ogq_A PGIP-2, polygalacturona 99.8 7.4E-20 2.5E-24 196.6 10.8 168 2-169 54-232 (313)
257 1ogq_A PGIP-2, polygalacturona 99.8 8.2E-20 2.8E-24 196.2 10.9 167 1-169 79-255 (313)
258 4fcg_A Uncharacterized protein 99.8 3.8E-19 1.3E-23 192.3 13.8 166 1-169 107-288 (328)
259 4fcg_A Uncharacterized protein 99.8 5.4E-19 1.9E-23 191.1 14.5 165 1-169 84-264 (328)
260 2o6q_A Variable lymphocyte rec 99.8 2.8E-18 9.7E-23 180.0 17.0 166 2-167 41-214 (270)
261 1ozn_A Reticulon 4 receptor; N 99.8 2.9E-18 1E-22 181.3 16.1 169 1-169 35-212 (285)
262 1zth_A RIO1 serine protein kin 99.8 1.4E-18 4.8E-23 181.1 12.2 137 447-599 48-219 (258)
263 3m19_A Variable lymphocyte rec 99.8 6E-18 2E-22 175.6 16.6 166 1-169 17-190 (251)
264 1p9a_G Platelet glycoprotein I 99.8 4.9E-18 1.7E-22 180.2 16.3 164 2-166 35-203 (290)
265 1ozn_A Reticulon 4 receptor; N 99.8 2.8E-18 9.6E-23 181.4 13.7 168 1-168 59-235 (285)
266 3m19_A Variable lymphocyte rec 99.8 6E-18 2.1E-22 175.5 15.3 149 1-149 38-194 (251)
267 3rfs_A Internalin B, repeat mo 99.7 2E-17 6.8E-22 173.8 17.6 166 1-168 44-215 (272)
268 2z66_A Variable lymphocyte rec 99.7 4.9E-18 1.7E-22 181.4 12.1 170 1-170 55-235 (306)
269 2z62_A TOLL-like receptor 4, v 99.7 1.3E-17 4.3E-22 175.5 13.2 168 1-169 31-211 (276)
270 2o6s_A Variable lymphocyte rec 99.7 9.8E-18 3.4E-22 168.6 10.6 143 3-148 12-162 (208)
271 3rfs_A Internalin B, repeat mo 99.7 5.4E-17 1.8E-21 170.5 15.6 149 1-151 66-222 (272)
272 2o6q_A Variable lymphocyte rec 99.7 7.5E-17 2.6E-21 169.2 16.6 166 1-169 19-192 (270)
273 3v47_A TOLL-like receptor 5B a 99.7 4.2E-17 1.4E-21 184.1 15.6 108 63-170 275-383 (455)
274 2v9t_B SLIT homolog 2 protein 99.7 5.7E-17 1.9E-21 164.7 14.3 147 2-168 15-162 (220)
275 2z66_A Variable lymphocyte rec 99.7 2.1E-17 7.3E-22 176.5 11.7 169 1-170 31-211 (306)
276 4eco_A Uncharacterized protein 99.7 7.2E-18 2.5E-22 198.8 8.5 165 2-168 85-340 (636)
277 2v70_A SLIT-2, SLIT homolog 2 99.7 6.2E-17 2.1E-21 164.4 14.2 147 2-168 15-163 (220)
278 2z62_A TOLL-like receptor 4, v 99.7 4.9E-17 1.7E-21 171.0 13.6 155 3-160 12-175 (276)
279 1p9a_G Platelet glycoprotein I 99.7 6.4E-17 2.2E-21 171.6 14.6 165 1-170 13-184 (290)
280 1wwl_A Monocyte differentiatio 99.7 1.8E-17 6.2E-22 177.8 10.0 164 2-168 99-284 (312)
281 3zyj_A Leucine-rich repeat-con 99.7 6.1E-17 2.1E-21 182.3 14.7 166 1-168 91-265 (440)
282 2id5_A Lingo-1, leucine rich r 99.7 4.5E-17 1.6E-21 185.2 13.5 168 1-168 35-210 (477)
283 3zyi_A Leucine-rich repeat-con 99.7 7.3E-17 2.5E-21 182.3 15.0 166 1-168 102-276 (452)
284 2v70_A SLIT-2, SLIT homolog 2 99.7 4.8E-17 1.7E-21 165.2 11.4 132 1-149 35-168 (220)
285 4eco_A Uncharacterized protein 99.7 2.4E-17 8.3E-22 194.3 10.5 167 1-170 252-445 (636)
286 3v47_A TOLL-like receptor 5B a 99.7 9.1E-17 3.1E-21 181.4 13.9 170 1-170 82-359 (455)
287 2xwt_C Thyrotropin receptor; s 99.7 5.4E-17 1.8E-21 166.9 10.8 166 1-169 34-216 (239)
288 3zyi_A Leucine-rich repeat-con 99.7 1.1E-16 3.8E-21 180.8 14.0 168 1-169 78-253 (452)
289 4ecn_A Leucine-rich repeat pro 99.7 3E-17 1E-21 197.8 9.9 166 2-169 327-584 (876)
290 2ft3_A Biglycan; proteoglycan, 99.7 1.3E-16 4.6E-21 172.5 13.4 167 1-169 57-252 (332)
291 3oja_A Leucine-rich immune mol 99.7 2.4E-17 8.1E-22 188.0 7.8 166 1-168 37-224 (487)
292 3zyj_A Leucine-rich repeat-con 99.7 2E-16 6.7E-21 178.1 15.2 169 1-170 67-243 (440)
293 3e6j_A Variable lymphocyte rec 99.7 2.2E-16 7.4E-21 161.4 13.6 145 2-167 23-168 (229)
294 1w8a_A SLIT protein; signaling 99.7 1.1E-16 3.9E-21 158.8 11.0 129 1-149 11-141 (192)
295 1wwl_A Monocyte differentiatio 99.7 6E-17 2E-21 173.7 9.1 164 1-169 124-307 (312)
296 1xku_A Decorin; proteoglycan, 99.7 2.1E-16 7.3E-21 170.7 13.4 165 1-169 55-227 (330)
297 2v9t_B SLIT homolog 2 protein 99.7 1.7E-16 6E-21 161.1 11.9 131 1-148 35-166 (220)
298 3vq2_A TLR4, TOLL-like recepto 99.7 1.2E-16 4E-21 187.3 11.4 169 1-169 353-532 (606)
299 1xku_A Decorin; proteoglycan, 99.7 6.6E-16 2.3E-20 166.8 15.8 161 1-168 103-273 (330)
300 2ft3_A Biglycan; proteoglycan, 99.7 4E-16 1.4E-20 168.7 13.6 161 2-168 37-227 (332)
301 3oja_B Anopheles plasmodium-re 99.7 4.6E-16 1.6E-20 182.1 15.2 167 2-170 79-290 (597)
302 4glp_A Monocyte differentiatio 99.7 1.1E-16 3.7E-21 171.5 8.5 166 1-170 94-284 (310)
303 2o6s_A Variable lymphocyte rec 99.7 8.9E-16 3.1E-20 154.2 14.6 152 1-158 31-189 (208)
304 2id5_A Lingo-1, leucine rich r 99.6 4E-16 1.4E-20 177.4 13.4 169 1-169 59-235 (477)
305 3t6q_A CD180 antigen; protein- 99.6 2.4E-16 8.1E-21 184.7 11.1 169 1-170 353-535 (606)
306 1ziw_A TOLL-like receptor 3; i 99.6 5.4E-16 1.9E-20 184.3 14.0 167 1-167 28-204 (680)
307 2z63_A TOLL-like receptor 4, v 99.6 4.4E-16 1.5E-20 180.9 12.6 168 1-168 350-528 (570)
308 3vq2_A TLR4, TOLL-like recepto 99.6 6.1E-16 2.1E-20 181.2 13.3 167 1-168 35-214 (606)
309 4ecn_A Leucine-rich repeat pro 99.6 6.2E-16 2.1E-20 186.5 13.5 166 1-170 494-685 (876)
310 3o6n_A APL1; leucine-rich repe 99.6 1.4E-15 4.9E-20 168.1 15.5 166 2-169 73-283 (390)
311 2z80_A TOLL-like receptor 2, v 99.6 5.2E-16 1.8E-20 169.3 11.7 149 2-150 80-238 (353)
312 2z7x_B TOLL-like receptor 1, v 99.6 1.1E-15 3.6E-20 175.8 14.2 118 1-123 24-150 (520)
313 3t6q_A CD180 antigen; protein- 99.6 8.2E-16 2.8E-20 180.2 13.2 170 1-170 328-512 (606)
314 3o53_A Protein LRIM1, AGAP0063 99.6 2E-16 6.9E-21 170.0 7.1 166 1-168 37-224 (317)
315 4gyi_A RIO2 kinase; protein ki 99.6 3.4E-16 1.2E-20 170.1 8.5 137 447-598 96-264 (397)
316 2z80_A TOLL-like receptor 2, v 99.6 1.6E-16 5.5E-21 173.3 6.0 163 3-169 36-209 (353)
317 2xot_A Amphoterin-induced prot 99.6 3.5E-16 1.2E-20 171.3 8.6 156 1-159 21-188 (361)
318 4glp_A Monocyte differentiatio 99.6 3E-16 1E-20 168.0 7.2 164 1-169 120-305 (310)
319 3oja_B Anopheles plasmodium-re 99.6 1.8E-15 6.2E-20 177.0 14.4 167 1-169 54-265 (597)
320 3oja_A Leucine-rich immune mol 99.6 7.4E-16 2.5E-20 175.6 10.2 162 1-168 61-247 (487)
321 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 2.3E-15 7.7E-20 174.9 14.1 118 1-123 55-181 (562)
322 2ell_A Acidic leucine-rich nuc 99.6 1.5E-15 5.2E-20 147.1 10.5 128 1-148 27-161 (168)
323 2z63_A TOLL-like receptor 4, v 99.6 1.6E-15 5.3E-20 176.2 12.5 167 1-168 31-210 (570)
324 4g8a_A TOLL-like receptor 4; l 99.6 1.6E-15 5.3E-20 178.2 12.6 154 1-154 55-221 (635)
325 4ezg_A Putative uncharacterize 99.6 2.7E-15 9.3E-20 149.4 12.4 145 19-168 41-191 (197)
326 1h6u_A Internalin H; cell adhe 99.6 2.8E-15 9.7E-20 160.3 12.6 159 1-171 44-208 (308)
327 1ziw_A TOLL-like receptor 3; i 99.6 4.4E-15 1.5E-19 176.5 15.4 168 1-168 384-570 (680)
328 3j0a_A TOLL-like receptor 5; m 99.6 2.2E-15 7.6E-20 183.4 13.0 168 1-168 27-214 (844)
329 3o6n_A APL1; leucine-rich repe 99.6 5E-15 1.7E-19 163.7 14.4 165 1-169 48-259 (390)
330 2z81_A CD282 antigen, TOLL-lik 99.6 3.7E-15 1.2E-19 172.4 13.2 164 1-168 313-507 (549)
331 2z7x_B TOLL-like receptor 1, v 99.6 1.4E-15 4.6E-20 174.9 9.1 165 1-170 250-433 (520)
332 2wfh_A SLIT homolog 2 protein 99.6 5.2E-15 1.8E-19 147.0 11.8 126 2-148 14-140 (193)
333 2o6r_A Variable lymphocyte rec 99.6 5.2E-15 1.8E-19 144.6 11.4 129 2-150 11-140 (177)
334 2z81_A CD282 antigen, TOLL-lik 99.6 2E-15 6.7E-20 174.7 9.8 164 3-169 10-183 (549)
335 3e6j_A Variable lymphocyte rec 99.6 1.5E-14 5E-19 147.8 15.1 126 42-170 21-147 (229)
336 1h6u_A Internalin H; cell adhe 99.6 1.1E-14 3.7E-19 155.8 14.5 156 1-168 66-227 (308)
337 2xwt_C Thyrotropin receptor; s 99.6 4.1E-15 1.4E-19 152.8 10.8 160 1-166 58-234 (239)
338 2xot_A Amphoterin-induced prot 99.6 5.7E-15 1.9E-19 161.7 12.5 147 24-170 20-175 (361)
339 3o53_A Protein LRIM1, AGAP0063 99.6 3.3E-15 1.1E-19 160.5 9.8 163 1-169 61-248 (317)
340 3cvr_A Invasion plasmid antige 99.6 1.1E-14 3.6E-19 168.0 14.5 149 1-170 62-219 (571)
341 1h6t_A Internalin B; cell adhe 99.6 1.2E-14 4E-19 154.2 13.6 156 1-168 49-210 (291)
342 1dce_A Protein (RAB geranylger 99.6 1.1E-15 3.8E-20 176.9 5.7 160 2-167 353-542 (567)
343 2je0_A Acidic leucine-rich nuc 99.6 2.5E-15 8.4E-20 142.5 6.7 122 2-142 21-148 (149)
344 4g8a_A TOLL-like receptor 4; l 99.6 1.2E-14 3.9E-19 170.7 13.2 128 41-168 446-577 (635)
345 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 8.7E-15 3E-19 170.0 11.8 163 1-169 334-508 (562)
346 4b8c_D Glucose-repressible alc 99.6 8E-16 2.7E-20 183.5 3.1 142 13-157 215-364 (727)
347 3j0a_A TOLL-like receptor 5; m 99.5 2.5E-14 8.4E-19 174.2 16.1 169 1-169 126-373 (844)
348 1w8a_A SLIT protein; signaling 99.5 3.6E-15 1.2E-19 148.0 7.0 137 1-154 32-169 (192)
349 1m9s_A Internalin B; cell inva 99.5 1.7E-14 5.7E-19 168.1 13.8 156 1-168 46-207 (605)
350 3cvr_A Invasion plasmid antige 99.5 2.7E-14 9.3E-19 164.6 15.0 128 23-168 60-190 (571)
351 1dce_A Protein (RAB geranylger 99.5 2.2E-16 7.4E-21 182.8 -2.8 138 10-152 397-551 (567)
352 1xeu_A Internalin C; cellular 99.5 2.1E-14 7.3E-19 149.9 12.6 153 3-168 24-182 (263)
353 4fmz_A Internalin; leucine ric 99.5 3.9E-14 1.3E-18 153.8 13.1 159 1-169 158-322 (347)
354 1jl5_A Outer protein YOPM; leu 99.5 2E-14 6.9E-19 162.2 10.3 156 1-168 14-205 (454)
355 1m9s_A Internalin B; cell inva 99.5 6.2E-14 2.1E-18 163.3 13.8 142 1-152 68-215 (605)
356 1h6t_A Internalin B; cell adhe 99.5 5.6E-14 1.9E-18 148.9 11.9 139 1-149 71-215 (291)
357 3bz5_A Internalin-J, INLJ; leu 99.5 2E-13 6.8E-18 154.1 16.4 153 1-169 45-202 (457)
358 1o6v_A Internalin A; bacterial 99.5 1.2E-13 4.1E-18 156.5 14.2 158 1-170 202-365 (466)
359 1jl5_A Outer protein YOPM; leu 99.5 1.9E-13 6.4E-18 154.2 15.4 134 22-168 111-247 (454)
360 1xeu_A Internalin C; cellular 99.5 6.6E-14 2.3E-18 146.1 10.8 139 1-149 44-187 (263)
361 4ezg_A Putative uncharacterize 99.5 4.8E-14 1.7E-18 140.3 9.2 143 1-148 47-195 (197)
362 2ca6_A RAN GTPase-activating p 99.5 2.5E-15 8.5E-20 166.0 -0.2 104 63-166 187-311 (386)
363 3bz5_A Internalin-J, INLJ; leu 99.5 2.6E-13 8.9E-18 153.2 15.8 152 1-168 67-222 (457)
364 1o6v_A Internalin A; bacterial 99.5 2E-13 6.9E-18 154.6 14.2 157 1-169 180-342 (466)
365 2jwp_A Malectin, MGC80075; sug 99.5 7.1E-14 2.4E-18 135.9 8.7 157 191-377 8-169 (174)
366 2wfh_A SLIT homolog 2 protein 99.5 3.2E-13 1.1E-17 133.9 13.5 122 44-168 14-136 (193)
367 2je0_A Acidic leucine-rich nuc 99.5 4.7E-14 1.6E-18 133.6 6.3 126 22-166 17-148 (149)
368 4fmz_A Internalin; leucine ric 99.5 1.9E-13 6.4E-18 148.4 12.0 159 1-170 135-299 (347)
369 3g06_A SSPH2 (leucine-rich rep 99.4 4.9E-13 1.7E-17 156.0 15.0 128 23-168 142-271 (622)
370 2ell_A Acidic leucine-rich nuc 99.4 1.7E-13 5.6E-18 132.6 9.0 128 39-169 23-158 (168)
371 3goz_A Leucine-rich repeat-con 99.4 1.5E-14 5.1E-19 158.4 1.0 169 1-169 1-207 (362)
372 3g39_A Variable lymphocyte rec 99.4 3.1E-13 1.1E-17 131.2 9.6 87 63-149 30-117 (170)
373 3goz_A Leucine-rich repeat-con 99.4 2.8E-14 9.4E-19 156.2 2.2 172 1-172 25-239 (362)
374 2o6r_A Variable lymphocyte rec 99.4 1.2E-12 4.2E-17 127.6 13.8 124 43-168 10-134 (177)
375 4b8c_D Glucose-repressible alc 99.4 4.5E-14 1.5E-18 168.4 3.9 137 1-144 227-369 (727)
376 2ca6_A RAN GTPase-activating p 99.4 1.7E-14 5.8E-19 159.3 0.0 171 1-171 35-257 (386)
377 2ast_B S-phase kinase-associat 99.4 2.7E-14 9.1E-19 154.3 1.4 168 1-169 73-258 (336)
378 1a9n_A U2A', U2A'; complex (nu 99.4 2E-13 6.8E-18 133.2 7.5 83 63-147 64-153 (176)
379 2ast_B S-phase kinase-associat 99.4 1.9E-14 6.5E-19 155.5 0.1 166 1-169 50-233 (336)
380 4ay9_X Follicle-stimulating ho 99.4 3.8E-13 1.3E-17 146.5 9.4 167 1-168 33-212 (350)
381 1ds9_A Outer arm dynein; leuci 99.4 2.6E-15 9E-20 149.7 -7.4 141 2-164 22-180 (198)
382 2r9u_A Variable lymphocyte rec 99.4 6.4E-13 2.2E-17 129.5 9.5 86 63-148 33-119 (174)
383 3g39_A Variable lymphocyte rec 99.4 1.2E-12 4E-17 127.1 11.1 101 65-168 11-112 (170)
384 3g06_A SSPH2 (leucine-rich rep 99.4 1E-12 3.5E-17 153.3 11.8 151 1-170 144-296 (622)
385 2r9u_A Variable lymphocyte rec 99.3 3.1E-12 1E-16 124.6 11.2 102 65-169 14-116 (174)
386 4ay9_X Follicle-stimulating ho 99.3 2.1E-12 7.2E-17 140.5 9.7 163 1-165 57-233 (350)
387 3tm0_A Aminoglycoside 3'-phosp 99.3 2.8E-11 9.7E-16 125.8 13.9 147 441-597 9-212 (263)
388 1a9n_A U2A', U2A'; complex (nu 99.3 4.7E-12 1.6E-16 123.4 7.4 102 63-168 42-150 (176)
389 2ifg_A High affinity nerve gro 99.3 7.4E-12 2.5E-16 135.9 9.7 85 63-147 31-116 (347)
390 1z7x_W Ribonuclease inhibitor; 99.3 2.2E-13 7.5E-18 153.7 -2.8 167 2-168 203-408 (461)
391 1z7x_W Ribonuclease inhibitor; 99.2 6.4E-13 2.2E-17 149.9 -2.2 166 2-167 89-293 (461)
392 1ds9_A Outer arm dynein; leuci 99.1 1.2E-12 4E-17 130.4 -3.7 123 1-148 51-186 (198)
393 1nd4_A Aminoglycoside 3'-phosp 99.1 6.6E-11 2.2E-15 122.4 8.8 138 445-597 19-213 (264)
394 3un9_A NLR family member X1; l 99.1 8.7E-12 3E-16 136.6 -0.8 148 1-148 75-253 (372)
395 2ifg_A High affinity nerve gro 99.1 2.6E-10 8.7E-15 123.7 10.6 100 67-169 12-114 (347)
396 3sb4_A Hypothetical leucine ri 99.0 9.1E-10 3.1E-14 118.5 10.8 98 63-162 226-325 (329)
397 3dxp_A Putative acyl-COA dehyd 98.9 2.3E-09 8E-14 116.7 11.3 142 450-598 42-248 (359)
398 3sg8_A APH(2'')-ID; antibiotic 98.9 1.1E-09 3.8E-14 116.4 7.3 187 451-651 25-288 (304)
399 3un9_A NLR family member X1; l 98.7 5.1E-10 1.7E-14 122.5 -3.2 149 21-169 71-250 (372)
400 3ogk_B Coronatine-insensitive 98.6 1.2E-09 4.2E-14 127.0 -3.9 107 63-169 378-499 (592)
401 3sb4_A Hypothetical leucine ri 98.6 6.2E-08 2.1E-12 104.0 9.7 100 40-141 226-328 (329)
402 3ogk_B Coronatine-insensitive 98.6 1.1E-08 3.9E-13 118.8 2.4 147 20-167 110-279 (592)
403 3r70_A Aminoglycoside phosphot 98.5 6.8E-07 2.3E-11 95.5 12.6 137 447-599 38-238 (320)
404 3d1u_A Putative fructosamine-3 98.4 9.1E-07 3.1E-11 93.0 12.1 144 448-597 17-215 (288)
405 2p1m_B Transport inhibitor res 98.3 6.4E-08 2.2E-12 112.5 0.6 168 1-170 317-518 (594)
406 2p1m_B Transport inhibitor res 98.3 4.1E-08 1.4E-12 114.1 -1.1 116 2-118 109-242 (594)
407 4fdw_A Leucine rich hypothetic 98.3 2.1E-06 7.1E-11 94.7 12.3 160 2-167 161-332 (401)
408 3tdw_A Gentamicin resistance p 98.3 4.5E-06 1.5E-10 88.5 13.5 137 451-599 24-225 (306)
409 4gkh_A Aminoglycoside 3'-phosp 98.2 8.9E-06 3.1E-10 84.2 14.3 140 446-597 25-222 (272)
410 4fdw_A Leucine rich hypothetic 98.2 4.6E-06 1.6E-10 91.9 12.4 159 2-167 139-309 (401)
411 3rw6_A Nuclear RNA export fact 98.2 1.9E-07 6.4E-12 96.5 0.8 82 68-151 148-237 (267)
412 2ra8_A Uncharacterized protein 98.2 7.6E-07 2.6E-11 96.6 4.0 154 14-169 131-318 (362)
413 3ovc_A Hygromycin-B 4-O-kinase 98.2 1.1E-05 3.7E-10 87.7 13.0 146 448-599 43-244 (362)
414 3rw6_A Nuclear RNA export fact 98.2 1E-06 3.5E-11 91.0 4.5 76 63-140 170-257 (267)
415 3ats_A Putative uncharacterize 98.1 4.4E-06 1.5E-10 90.5 9.2 82 450-531 24-122 (357)
416 1io0_A Tropomodulin; LRR prote 98.1 4E-07 1.4E-11 89.1 0.9 117 17-147 31-164 (185)
417 2ra8_A Uncharacterized protein 98.1 1.2E-06 4.1E-11 95.0 3.3 134 14-147 164-320 (362)
418 1io0_A Tropomodulin; LRR prote 98.0 9.1E-07 3.1E-11 86.5 1.3 111 1-124 39-164 (185)
419 2q83_A YTAA protein; 2635576, 97.9 5.6E-05 1.9E-09 80.9 11.8 142 451-597 37-251 (346)
420 3f7w_A Putative fructosamine-3 97.8 0.00011 3.7E-09 77.0 12.3 80 446-529 15-97 (288)
421 2olc_A MTR kinase, methylthior 97.8 6.6E-05 2.3E-09 82.5 11.1 75 451-527 35-120 (397)
422 3jr1_A Putative fructosamine-3 97.7 0.0002 6.9E-09 75.8 13.0 140 450-594 40-232 (312)
423 2ppq_A HSK, HK, homoserine kin 97.4 0.00081 2.8E-08 71.2 11.8 159 436-597 7-216 (322)
424 2pyw_A Uncharacterized protein 97.3 0.00056 1.9E-08 75.7 10.3 78 567-646 231-312 (420)
425 1nw1_A Choline kinase (49.2 KD 97.2 0.00082 2.8E-08 74.5 9.2 73 451-529 78-159 (429)
426 3feg_A Choline/ethanolamine ki 97.0 0.002 6.8E-08 70.0 9.8 142 451-597 55-253 (379)
427 1zyl_A Hypothetical protein YI 96.9 0.009 3.1E-07 63.2 14.6 159 436-598 11-223 (328)
428 3csv_A Aminoglycoside phosphot 96.9 0.0035 1.2E-07 66.7 11.2 144 451-599 23-218 (333)
429 3dxq_A Choline/ethanolamine ki 96.9 0.002 7E-08 67.5 8.9 71 451-529 23-95 (301)
430 3rfe_A Platelet glycoprotein I 96.6 0.0025 8.5E-08 58.0 6.2 56 67-124 12-68 (130)
431 2qg7_A Ethanolamine kinase PV0 96.6 0.0083 2.8E-07 66.8 11.5 74 451-529 113-188 (458)
432 3e4g_A ATP synthase subunit S, 96.6 0.001 3.4E-08 63.8 3.3 83 63-145 61-150 (176)
433 3c5i_A Choline kinase; choline 96.5 0.0036 1.2E-07 67.7 7.9 74 451-529 38-121 (369)
434 3e4g_A ATP synthase subunit S, 96.3 0.0011 3.8E-08 63.5 1.7 82 41-122 62-150 (176)
435 3i1a_A Spectinomycin phosphotr 96.3 0.013 4.4E-07 62.6 10.3 32 567-598 205-236 (339)
436 3f2s_A CK, chetk-alpha, cholin 96.2 0.023 7.8E-07 62.0 11.4 143 451-597 57-279 (401)
437 2yle_A Protein spire homolog 1 95.9 0.031 1.1E-06 54.9 9.5 102 527-648 33-134 (229)
438 3rfe_A Platelet glycoprotein I 95.8 0.012 4E-07 53.5 5.9 57 44-100 12-68 (130)
439 4gt6_A Cell surface protein; l 95.6 0.021 7.2E-07 62.2 8.4 81 63-146 288-369 (394)
440 1pgv_A TMD-1, tropomodulin TMD 95.6 0.0018 6.2E-08 63.1 -0.5 59 63-121 70-136 (197)
441 4fs7_A Uncharacterized protein 95.4 0.031 1.1E-06 60.8 8.9 97 63-165 276-373 (394)
442 4h09_A Hypothetical leucine ri 95.4 0.076 2.6E-06 57.2 11.5 99 63-164 240-339 (379)
443 1pgv_A TMD-1, tropomodulin TMD 95.1 0.0055 1.9E-07 59.7 1.2 103 22-124 41-170 (197)
444 4fs7_A Uncharacterized protein 95.0 0.14 4.9E-06 55.5 12.4 157 2-165 166-350 (394)
445 3mes_A Choline kinase; malaria 94.3 0.11 3.8E-06 57.0 9.4 74 451-529 75-157 (424)
446 4h09_A Hypothetical leucine ri 94.1 0.18 6.2E-06 54.2 10.6 101 63-166 217-318 (379)
447 4gt6_A Cell surface protein; l 94.0 0.1 3.5E-06 56.7 8.2 106 58-167 259-366 (394)
448 3g15_A CK, chetk-alpha, cholin 91.9 0.48 1.6E-05 51.5 9.8 29 569-597 245-279 (401)
449 4ann_A ESSB; membrane protein, 84.8 4.3 0.00015 39.6 9.8 116 500-651 43-158 (215)
450 3cxl_A N-chimerin; SH2, RHO-GA 81.5 0.17 5.7E-06 56.4 -2.0 61 450-513 146-215 (463)
451 2ks1_B Epidermal growth factor 77.8 1.7 6E-05 30.7 3.0 25 393-417 15-40 (44)
452 2k1k_A Ephrin type-A receptor 77.0 1.1 3.8E-05 30.7 1.8 30 384-413 5-36 (38)
453 4ano_A ESSB; membrane protein, 76.3 9 0.00031 37.5 8.8 115 500-651 48-163 (219)
454 2l2t_A Receptor tyrosine-prote 68.7 2.5 8.4E-05 29.9 1.9 25 394-418 15-40 (44)
455 2jwa_A Receptor tyrosine-prote 67.8 1.9 6.4E-05 30.5 1.2 25 392-416 14-39 (44)
456 2l8s_A Integrin alpha-1; trans 58.9 4.1 0.00014 30.1 1.6 33 388-420 8-40 (54)
457 2knc_A Integrin alpha-IIB; tra 58.3 4.2 0.00014 30.1 1.6 34 387-420 10-43 (54)
458 2k9y_A Ephrin type-A receptor 57.1 3.8 0.00013 28.4 1.2 11 391-401 15-25 (41)
459 2k1a_A Integrin alpha-IIB; sin 47.3 12 0.00041 26.2 2.4 31 388-418 9-39 (42)
460 1cja_A Protein (actin-fragmin 39.3 1.2E+02 0.0041 31.5 9.6 141 448-599 71-238 (342)
461 2ks1_B Epidermal growth factor 31.0 36 0.0012 24.0 2.8 6 395-400 13-18 (44)
462 3ls8_A Phosphatidylinositol 3- 26.6 2.1E+02 0.0072 32.3 9.7 47 544-597 453-501 (614)
463 1iij_A ERBB-2 receptor protein 23.1 14 0.00047 24.7 -0.5 6 409-414 28-33 (35)
464 2l34_A TYRO protein tyrosine k 22.6 32 0.0011 22.6 1.2 24 389-412 6-30 (33)
465 2zxe_G FXYD10, phospholemman-l 21.6 44 0.0015 26.1 1.9 23 396-418 24-46 (74)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.6e-53 Score=456.71 Aligned_cols=261 Identities=27% Similarity=0.445 Sum_probs=208.6
Q ss_pred cCcceeeeecccCcEEEEeeeec------CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA------DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~------~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
++|.+.++||+|+||.||+|.+. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 56778899999999999999864 478899999987766667889999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCcc-----------ccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCe
Q 040908 520 IYEYLENNSLARALFGPEE-----------HRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNP 588 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ 588 (790)
|||||++|+|.++++.... ...+++|.+++.|+.|||+||+|||+.+ ||||||||+||||++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence 9999999999999965321 2346999999999999999999999874 9999999999999999999
Q ss_pred EEeecCCccccCCCC-cceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHH
Q 040908 589 KISDFGLAKLDEEDN-THISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWAL 666 (790)
Q Consensus 589 kl~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~ 666 (790)
||+|||+|+...... ....+...||+.|||||++.+..++.++|||||||++|||+| |+.||......+. ....
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~---~~~i- 273 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA---IDCI- 273 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH---HHHH-
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH---HHHH-
Confidence 999999998664433 223345779999999999999999999999999999999999 8999976543221 1111
Q ss_pred HHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 040908 667 LLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVGV 725 (790)
Q Consensus 667 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~~ 725 (790)
..+.. +. .+.....++.+++.+||+.||++||||.||++.|+.....
T Consensus 274 ---~~g~~-----~~----~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 274 ---TQGRE-----LE----RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp ---HHTCC-----CC----CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ---HcCCC-----CC----CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 11211 11 1222345688999999999999999999999999886543
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.1e-53 Score=453.21 Aligned_cols=259 Identities=27% Similarity=0.491 Sum_probs=213.2
Q ss_pred cCcceeeeecccCcEEEEeeeec------CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA------DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~------~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
++|.+.+.||+|+||.||+|.+. +++.||||+++..+....++|.+|+++|++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 57889999999999999999853 477899999987766667889999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCc---------cccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEE
Q 040908 520 IYEYLENNSLARALFGPE---------EHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKI 590 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 590 (790)
|||||++|+|.++|+... .....++|.++..|+.|||+||+|||+++ |+||||||+||||++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence 999999999999995432 12357999999999999999999999974 999999999999999999999
Q ss_pred eecCCccccCCCCcc-eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHH
Q 040908 591 SDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLL 668 (790)
Q Consensus 591 ~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~ 668 (790)
+|||+|+........ ......||++|||||++.+..++.|+|||||||++|||+| |+.||......+. ...
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~---~~~---- 242 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV---IEC---- 242 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH---HHH----
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHH----
Confidence 999999865443322 2234569999999999999999999999999999999999 8999976543221 111
Q ss_pred HhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 669 KEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 669 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
...+... ..+...+.++.+++..||+.||++||||.||+++|+...
T Consensus 243 i~~~~~~---------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 243 ITQGRVL---------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HHHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHcCCCC---------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1112211 112233456889999999999999999999999998754
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5.1e-53 Score=452.15 Aligned_cols=259 Identities=26% Similarity=0.414 Sum_probs=212.0
Q ss_pred cCcceeeeecccCcEEEEeeeec------CCcEEEEEEccccch-hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA------DGTLIAVKQLSAKSK-QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLL 518 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~------~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 518 (790)
+++++.++||+|+||.||+|.+. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+.+..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 45678899999999999999863 467899999976533 34578999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCcc------------ccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCC
Q 040908 519 LIYEYLENNSLARALFGPEE------------HRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL 586 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~ 586 (790)
+|||||++|+|.++|+.... ....++|..+..|+.|||+||+|||+.+ ||||||||+||||++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCC
Confidence 99999999999999964321 2356999999999999999999999985 99999999999999999
Q ss_pred CeEEeecCCccccCCCC-cceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHH
Q 040908 587 NPKISDFGLAKLDEEDN-THISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDW 664 (790)
Q Consensus 587 ~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~ 664 (790)
++||+|||+|+...... ....+...||++|||||++.++.++.++|||||||++|||+| |+.||......+ +...
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~---~~~~ 259 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD---VVEM 259 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH---HHHH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH---HHHH
Confidence 99999999998654332 223345679999999999999999999999999999999999 899997654322 1111
Q ss_pred HHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 665 ALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 665 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
. ..+... ..+..++..+.+++..||+.||.+||||.||++.|+...
T Consensus 260 i----~~~~~~---------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 260 I----RNRQVL---------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp H----HTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred H----HcCCCC---------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 1 112111 122234457889999999999999999999999998653
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-52 Score=442.63 Aligned_cols=259 Identities=27% Similarity=0.476 Sum_probs=203.5
Q ss_pred HhcCcceeeeecccCcEEEEeeeecCCcEEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
..+++++.++||+|+||+||+|++.+ .||||+++.. .....+.|.+|+.++++++|||||+++|+|.+ +..++||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 34678899999999999999999753 5999998643 33445789999999999999999999999865 5689999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
|||++|+|.++|+.. ...++|.++..|+.|||+||+|||+.+ ||||||||+||||++++++||+|||+|+....
T Consensus 111 Ey~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp ECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EcCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 999999999999543 346999999999999999999999974 99999999999999999999999999987654
Q ss_pred CC-cceeeccccCCCcccHHHhhc---CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 602 DN-THISTRVAGTFGYMAPEYAMR---GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 602 ~~-~~~~~~~~gt~~y~aPE~~~~---~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
.. .......+||+.|||||++.+ +.|+.|+|||||||+||||+||+.||......... ......+ .
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~------~~~~~~~----~ 254 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI------IFMVGRG----Y 254 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH------HHHHHTT----C
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHH------HHHHhcC----C
Confidence 32 223445789999999999964 46899999999999999999999999754332211 1111111 1
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGR 722 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~ 722 (790)
..|.+ ...+......+.+++..||+.||++||||.||++.|+..
T Consensus 255 ~~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 255 ASPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp CCCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred CCCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 11211 112223445788999999999999999999999988764
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.9e-51 Score=436.67 Aligned_cols=266 Identities=26% Similarity=0.324 Sum_probs=203.2
Q ss_pred cCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCC----eEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGN----QLLLIY 521 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lV~ 521 (790)
++|.+.++||+|+||+||+|++ +|+.||||++...... ...+..|+..+.+++|||||+++|+|.+.+ .+++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 5688899999999999999998 5899999999654322 223345667778899999999999998754 689999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcC-----CCcEEeccCCCCcEEecCCCCeEEeecCCc
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEES-----RLKIVHRDIKATNVLLDKDLNPKISDFGLA 596 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~-----~~~iiHrDlk~~NILl~~~~~~kl~DFGla 596 (790)
|||++|+|.++|+ ...++|..+.+++.|+|+||+|||+++ .++|+||||||+||||+.++++||+|||+|
T Consensus 81 Ey~~~gsL~~~l~-----~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 81 DYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp ECCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCCCcHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 9999999999994 246899999999999999999999862 457999999999999999999999999999
Q ss_pred cccCCCCcc---eeeccccCCCcccHHHhhcC------CCCChhhHHHHHHHHHHHHhCCCCCccccccchh--------
Q 040908 597 KLDEEDNTH---ISTRVAGTFGYMAPEYAMRG------HLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKF-------- 659 (790)
Q Consensus 597 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~-------- 659 (790)
+........ .....+||+.|||||++.+. .++.|+|||||||++|||+||+.|+.........
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 876543322 12346799999999999764 3677999999999999999998877543221100
Q ss_pred -hHHHHHHHHHhhCCcccccCCCCCCCC-cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 660 -YLLDWALLLKEQGNLMELVDPNLGSNV-DKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 660 -~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
........ . ..+.++|.+.... +.+....+.+++.+||+.||.+||||.||++.|+.+.
T Consensus 236 ~~~~~~~~~-~----~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 236 PSVEEMRKV-V----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp CCHHHHHHH-H----TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred chHHHHHHH-H----hcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 00111111 1 1112233332222 2356678999999999999999999999999998754
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.5e-50 Score=433.18 Aligned_cols=249 Identities=24% Similarity=0.430 Sum_probs=208.5
Q ss_pred cCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEec
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYL 524 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 524 (790)
+.|++.++||+|+||.||+|... +|+.||||++........+.+.+|+.+|++++|||||++++++.+++.+|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 57999999999999999999964 68999999997665555667899999999999999999999999999999999999
Q ss_pred cCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCCc
Q 040908 525 ENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 604 (790)
Q Consensus 525 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 604 (790)
++|+|.+++. ...+++..+..++.||+.||+|||+++ ||||||||+||||+.++++||+|||+|+.......
T Consensus 154 ~gg~L~~~l~-----~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 154 EGGALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp TTEEHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCcHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 9999999983 246899999999999999999999985 99999999999999999999999999997654332
Q ss_pred ceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCCCCC
Q 040908 605 HISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLGS 684 (790)
Q Consensus 605 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 684 (790)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||......+....+ . .. ..+.+
T Consensus 226 -~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i------~-~~-----~~~~~-- 290 (346)
T 4fih_A 226 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------R-DN-----LPPRL-- 290 (346)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH------H-HS-----SCCCC--
T ss_pred -cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH------H-cC-----CCCCC--
Confidence 234578999999999999999999999999999999999999999765432221111 1 11 11111
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 685 NVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 685 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
........++.+++.+||+.||.+|||+.|+++
T Consensus 291 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 291 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111223456788999999999999999999865
No 7
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.3e-50 Score=441.25 Aligned_cols=270 Identities=25% Similarity=0.363 Sum_probs=217.5
Q ss_pred ccHHHHHHHhcCcceeeeecccCcEEEEeeeecC------CcEEEEEEccccch-hcHHHHHHHHHHhhccCC-Cceeee
Q 040908 436 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLAD------GTLIAVKQLSAKSK-QGNREFVNEIGTISALQH-PHLVKL 507 (790)
Q Consensus 436 ~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~------g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H-~niv~l 507 (790)
+...+++...++|++.+.||+|+||.||+|.+.. ++.||||++..... ...+.|.+|+.+|.+++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4455667778899999999999999999998532 36899999976533 345679999999999965 899999
Q ss_pred eeEEEeC-CeEEEEEEeccCCChhhhhcCCcc------------ccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEecc
Q 040908 508 YGCCIEG-NQLLLIYEYLENNSLARALFGPEE------------HRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRD 574 (790)
Q Consensus 508 ~g~~~~~-~~~~lV~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrD 574 (790)
+|+|.+. +.+++|||||++|+|.++|+.... ....++|..+..++.|||+||+|||+++ |||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCc
Confidence 9999764 568999999999999999964322 1345899999999999999999999984 99999
Q ss_pred CCCCcEEecCCCCeEEeecCCccccCCCCcc-eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCcc
Q 040908 575 IKATNVLLDKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMC 652 (790)
Q Consensus 575 lk~~NILl~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~ 652 (790)
|||+|||+++++.+||+|||+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999976554433 3345679999999999999999999999999999999998 8999976
Q ss_pred ccccchhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 653 KTKEEKFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 653 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
....+.. ......+.. +.. +.....++.+++..||+.||.+||||.||++.|+...
T Consensus 291 ~~~~~~~------~~~i~~g~~-----~~~----p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 291 VKIDEEF------CRRLKEGTR-----MRA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp CCCSHHH------HHHHHHTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCHHHHH------HHHHHcCCC-----CCC----CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 4432211 111112211 111 2223456788999999999999999999999998754
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.6e-50 Score=434.54 Aligned_cols=250 Identities=22% Similarity=0.389 Sum_probs=201.3
Q ss_pred cCcceeeeecccCcEEEEeeee-cCCcEEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
++|++.+.||+|+||.||+|+. .+|+.||||++... .....+.|.+|+.+|++++|||||++++++.+.+..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 6899999999999999999995 46899999998654 23345679999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCC
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 602 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 602 (790)
||++|+|.++|... ....+++.++..|+.||+.||+|||+++ |+||||||+||||+.++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 99999999999432 2345788999999999999999999985 999999999999999999999999999866432
Q ss_pred CcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCCC
Q 040908 603 NTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNL 682 (790)
Q Consensus 603 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 682 (790)
. ......+||+.|||||++.+..|+.++|||||||++|||+||+.||......+.. ... ..+.. +..
T Consensus 179 ~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~------~~i-~~~~~-----~~~ 245 (350)
T 4b9d_A 179 V-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV------LKI-ISGSF-----PPV 245 (350)
T ss_dssp H-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH------HHH-HHTCC-----CCC
T ss_pred c-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH------HHH-HcCCC-----CCC
Confidence 2 1234467999999999999999999999999999999999999999765432211 111 11111 111
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 683 GSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 683 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
... ...++.+++.+||+.||.+|||+.|+++
T Consensus 246 ~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 246 SLH----YSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred Ccc----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 122 2346788999999999999999999976
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-49 Score=419.57 Aligned_cols=247 Identities=25% Similarity=0.408 Sum_probs=196.9
Q ss_pred cceeeeecccCcEEEEeeeec-CCcEEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEe----CCeEEEE
Q 040908 448 FDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIE----GNQLLLI 520 (790)
Q Consensus 448 y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lV 520 (790)
|++.++||+|+||.||+|... ++..||+|++... .....+.|.+|+.+|++++|||||+++++|.. .+.+++|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 367788999999999999964 6889999998654 23345679999999999999999999999865 3468999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC-CCCeEEeecCCcccc
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK-DLNPKISDFGLAKLD 599 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~-~~~~kl~DFGla~~~ 599 (790)
||||++|+|.+++. ....+++..+..++.||+.||+|||+++ ++|+||||||+||||+. ++.+||+|||+|+..
T Consensus 108 mEy~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 108 TELMTSGTLKTYLK----RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EeCCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 99999999999994 2357999999999999999999999874 46999999999999984 799999999999865
Q ss_pred CCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccC
Q 040908 600 EEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVD 679 (790)
Q Consensus 600 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 679 (790)
... .....+||+.|||||++.+ .++.++|||||||++|||+||+.||........ +. .. ...+.....
T Consensus 183 ~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~--~~---~~-i~~~~~~~~-- 250 (290)
T 3fpq_A 183 RAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--IY---RR-VTSGVKPAS-- 250 (290)
T ss_dssp CTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--HH---HH-HTTTCCCGG--
T ss_pred CCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH--HH---HH-HHcCCCCCC--
Confidence 432 2345789999999998864 699999999999999999999999964332211 11 11 111111111
Q ss_pred CCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 680 PNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 680 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.+.....++.+++.+||+.||.+|||+.|+++
T Consensus 251 ------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 ------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11112245788999999999999999999875
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.3e-49 Score=428.33 Aligned_cols=253 Identities=24% Similarity=0.271 Sum_probs=204.4
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEY 523 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 523 (790)
.+.|++.++||+|+||.||+|+. .+|+.||||+++.... +.+|+.++++++|||||++++++.+++..++||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 35688899999999999999995 4689999999965322 24799999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCC-CeEEeecCCccccCCC
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL-NPKISDFGLAKLDEED 602 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-~~kl~DFGla~~~~~~ 602 (790)
|++|+|.+++. ....+++..+..++.||+.||+|||+++ ||||||||+||||+.++ ++||+|||+|+.....
T Consensus 132 ~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 132 LEGGSLGQLIK----QMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred cCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 99999999994 2357999999999999999999999985 99999999999999987 6999999999976543
Q ss_pred Ccc----eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccccc
Q 040908 603 NTH----ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELV 678 (790)
Q Consensus 603 ~~~----~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 678 (790)
... .....+||+.|||||++.+..++.++|||||||++|||+||+.||......+....+ ........+
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i-----~~~~~~~~~-- 277 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKI-----ASEPPPIRE-- 277 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHH-----HHSCCGGGG--
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH-----HcCCCCchh--
Confidence 221 123367999999999999999999999999999999999999999765443322111 111111111
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 679 DPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 679 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
+ +......+.+++.+||+.||.+|||+.|+++.|....
T Consensus 278 ---~----~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 278 ---I----PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp ---S----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---c----CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 1 1223456788999999999999999999998876543
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.1e-49 Score=421.68 Aligned_cols=247 Identities=23% Similarity=0.341 Sum_probs=206.9
Q ss_pred cCcceeeeecccCcEEEEeeee-cCCcEEEEEEcccc---chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAK---SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
++|++.+.||+|+||+||+|+. .+|+.||||++.+. .....+.+.+|+++|++++|||||++++++.+.+..++||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999995 56899999999753 2334567999999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
|||++|+|.+++. ....+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+|+....
T Consensus 112 Ey~~gG~L~~~i~----~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 9999999999993 2357999999999999999999999985 99999999999999999999999999997654
Q ss_pred CCc-ceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 602 DNT-HISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 602 ~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
... ......+||+.|||||++.+..|+.++||||+||++|||+||+.||...+..+... ... .+..
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~-----~i~--~~~~------ 251 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA-----KII--KLEY------ 251 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-----HHH--HTCC------
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----HHH--cCCC------
Confidence 332 23455789999999999999999999999999999999999999997654322211 111 1111
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVV 716 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~ 716 (790)
.....+ ..++.+++.+|++.||.+|||+.|+.
T Consensus 252 ~~p~~~----s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 252 DFPEKF----FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CCCTTC----CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CCCccc----CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 111222 34678899999999999999998864
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.3e-49 Score=434.45 Aligned_cols=250 Identities=24% Similarity=0.422 Sum_probs=208.6
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEY 523 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 523 (790)
.+.|++.+.||+|+||.||+|... +|+.||||++........+.+.+|+.+|++++|||||++++++.+.+.+|+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 367999999999999999999964 6899999999766555566789999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCC
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 603 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~ 603 (790)
|++|+|.+++. ...+++..+..++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+......
T Consensus 230 ~~gG~L~~~i~-----~~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 230 LEGGALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp CTTEEHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred CCCCcHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 99999999983 246899999999999999999999985 9999999999999999999999999998765433
Q ss_pred cceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCCCC
Q 040908 604 THISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLG 683 (790)
Q Consensus 604 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 683 (790)
. .....+||+.|||||++.+..|+.++|||||||++|||++|+.||......+....+ ... ..+.+.
T Consensus 302 ~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i-------~~~-----~~~~~~ 368 (423)
T 4fie_A 302 P-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------RDN-----LPPRLK 368 (423)
T ss_dssp C-CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-------HHS-----CCCCCS
T ss_pred c-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-------HcC-----CCCCCc
Confidence 2 234578999999999999999999999999999999999999999765432221111 111 111111
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 684 SNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 684 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.......++.+++.+||+.||.+|||+.|+++
T Consensus 369 --~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 369 --NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp --CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01122346788999999999999999999865
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.8e-48 Score=408.80 Aligned_cols=245 Identities=26% Similarity=0.413 Sum_probs=189.7
Q ss_pred cCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.++++++|||||++++++.+.+..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999985 468999999986532 233567999999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+ +|+|.+++. ....+++..+..++.||+.||+|||+++ |+||||||+|||+++++++||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~----~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHH----HSCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 689999983 2357999999999999999999999985 99999999999999999999999999986554
Q ss_pred CCcceeeccccCCCcccHHHhhcCCC-CChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHL-TDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
.. .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||......... ... ..+..
T Consensus 165 ~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~------~~i-~~~~~------ 229 (275)
T 3hyh_A 165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF------KNI-SNGVY------ 229 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHH-HHTCC------
T ss_pred CC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHH------HHH-HcCCC------
Confidence 32 2345689999999999998776 57999999999999999999999754332211 111 11111
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.+... ...++.+++.+|++.||++|||+.|+++
T Consensus 230 ~~p~~----~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 TLPKF----LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCCTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCC----CCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 11112 2346788999999999999999999987
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.2e-48 Score=415.66 Aligned_cols=242 Identities=26% Similarity=0.364 Sum_probs=193.0
Q ss_pred cCcceeeeecccCcEEEEeeeec----CCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA----DGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~----~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
++|++.+.||+|+||+||+|+.. .++.||||++.... ......+.+|+++|++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999742 46799999986542 2234468899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
|||||++|+|.+++. ....+++..+..++.||+.||+|||+++ |+||||||+|||+++++++||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999993 2357999999999999999999999985 999999999999999999999999999865
Q ss_pred CCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccC
Q 040908 600 EEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVD 679 (790)
Q Consensus 600 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 679 (790)
..... .....+||+.|||||++.+..++.++|||||||++|||+||+.||...+..+.... . ..+..
T Consensus 177 ~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~------i-~~~~~----- 243 (304)
T 3ubd_A 177 IDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM------I-LKAKL----- 243 (304)
T ss_dssp ----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------H-HHCCC-----
T ss_pred cCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHH------H-HcCCC-----
Confidence 43322 23457899999999999999999999999999999999999999976543322111 1 11111
Q ss_pred CCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 040908 680 PNLGSNVDKEQVRVMINVALLCADVSPTNRPLM 712 (790)
Q Consensus 680 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 712 (790)
.... ....++.+++.+||+.||.+|||+
T Consensus 244 -~~p~----~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 -GMPQ----FLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp -CCCT----TSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred -CCCC----cCCHHHHHHHHHHcccCHHHCCCC
Confidence 1111 223467889999999999999984
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=8.2e-47 Score=402.87 Aligned_cols=250 Identities=22% Similarity=0.380 Sum_probs=187.4
Q ss_pred cCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccch-hcHHHHHHHHHHhhccCCCceeeeeeEEEeCC--------
Q 040908 446 NHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSK-QGNREFVNEIGTISALQHPHLVKLYGCCIEGN-------- 515 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-------- 515 (790)
++|++.+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+.+|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4699999999999999999995 4689999999875433 33467899999999999999999999987644
Q ss_pred ----eEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEe
Q 040908 516 ----QLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKIS 591 (790)
Q Consensus 516 ----~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 591 (790)
.+++|||||++|+|.+++..... ....++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEc
Confidence 36999999999999999954322 234567778899999999999999985 9999999999999999999999
Q ss_pred ecCCccccCCCCcc-----------eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhh
Q 040908 592 DFGLAKLDEEDNTH-----------ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFY 660 (790)
Q Consensus 592 DFGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~ 660 (790)
|||+|+........ ..+..+||+.|||||++.+..|+.++|||||||++|||++ ||.... +...
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~--~~~~ 235 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM--ERVR 235 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH--HHHH
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc--HHHH
Confidence 99999876543211 1234679999999999999999999999999999999996 664321 1110
Q ss_pred HHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 661 LLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 661 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. . . ....... .........+.+++.+||+.||.+|||+.|+++
T Consensus 236 ~~--~-~-~~~~~~p---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 236 TL--T-D-VRNLKFP---------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HH--H-H-HHTTCCC---------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH--H-H-HhcCCCC---------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 0 0 0111110 011123345678999999999999999999876
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.7e-46 Score=401.97 Aligned_cols=287 Identities=45% Similarity=0.787 Sum_probs=250.7
Q ss_pred ccHHHHHHHhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCC
Q 040908 436 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGN 515 (790)
Q Consensus 436 ~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 515 (790)
+++.+++.++++|++.+.||+|+||.||+|...+|+.||||++........+.+.+|+.++++++||||+++++++.+.+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 34445566789999999999999999999998889999999998766666778999999999999999999999999999
Q ss_pred eEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCC
Q 040908 516 QLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 595 (790)
Q Consensus 516 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGl 595 (790)
..++||||+++|+|.+++.........++|..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccc
Confidence 999999999999999999655444456999999999999999999999985 99999999999999999999999999
Q ss_pred ccccCCCC-cceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCc
Q 040908 596 AKLDEEDN-THISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNL 674 (790)
Q Consensus 596 a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 674 (790)
++...... ........||+.|+|||++.+..++.++|||||||++|||+||+.||......+......|.......+.+
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 98654322 22234456899999999999999999999999999999999999999876665556667777766677778
Q ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 040908 675 MELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVGV 725 (790)
Q Consensus 675 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~~ 725 (790)
.+.+++.+......+....+.+++.+||+.||.+|||+.||++.|+.....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 888888888888888999999999999999999999999999999976543
No 17
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=8.3e-46 Score=401.37 Aligned_cols=291 Identities=44% Similarity=0.764 Sum_probs=252.6
Q ss_pred CCCccHHHHHHHhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccch-hcHHHHHHHHHHhhccCCCceeeeeeEE
Q 040908 433 TGSFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSK-QGNREFVNEIGTISALQHPHLVKLYGCC 511 (790)
Q Consensus 433 ~~~~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~ 511 (790)
...++++++..++++|++.+.||+|+||.||+|...+|+.||||++..... .....+.+|+.++++++||||++++++|
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456889999999999999999999999999999988899999999976432 2234689999999999999999999999
Q ss_pred EeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEe
Q 040908 512 IEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKIS 591 (790)
Q Consensus 512 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 591 (790)
...+..++||||+++|+|.+++.........++|..+..++.|++.||+|||+.+.++|+||||||+|||++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999997665555679999999999999999999999854569999999999999999999999
Q ss_pred ecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCcccc--ccchhhHHHHHHHHH
Q 040908 592 DFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKT--KEEKFYLLDWALLLK 669 (790)
Q Consensus 592 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~--~~~~~~l~~~~~~~~ 669 (790)
|||+++..............||+.|+|||++.+..++.++|||||||++|||+||+.||.... ........+|.....
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 999999776555555556779999999999999899999999999999999999999996422 223344556666666
Q ss_pred hhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 670 EQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 670 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
....+....+..+.......+...+.+++..||+.||.+|||+.||++.|++..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp SSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 667777888888888888899999999999999999999999999999998754
No 18
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-44 Score=396.06 Aligned_cols=260 Identities=19% Similarity=0.305 Sum_probs=200.9
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEe------CC
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIE------GN 515 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~------~~ 515 (790)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.+|++++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 36899999999999999999995 479999999996542 2334678899999999999999999998764 35
Q ss_pred eEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCC
Q 040908 516 QLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 595 (790)
Q Consensus 516 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGl 595 (790)
..|+|||||+ |+|.+++.. ...+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEEeCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecce
Confidence 7899999996 689999943 357999999999999999999999985 99999999999999999999999999
Q ss_pred ccccCCCC---cceeeccccCCCcccHHHhhcC-CCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhh
Q 040908 596 AKLDEEDN---THISTRVAGTFGYMAPEYAMRG-HLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQ 671 (790)
Q Consensus 596 a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 671 (790)
|+...... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||...+..+....+. ...
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~-----~~~ 279 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM-----MVL 279 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHH-----HHH
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHH-----Hhc
Confidence 98654321 2233457899999999998875 56899999999999999999999997655433222111 011
Q ss_pred CCcccc----------------cCCCCCCCCc---HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 672 GNLMEL----------------VDPNLGSNVD---KEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 672 ~~~~~~----------------~d~~l~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
+..... +.+....... .....++.+++.+||+.||.+|||+.|+++
T Consensus 280 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 280 GTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 110000 0000000000 011346788999999999999999999876
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6.6e-44 Score=390.63 Aligned_cols=200 Identities=27% Similarity=0.435 Sum_probs=171.3
Q ss_pred HHhcCcceeeeecccCcEEEEeeeec----CCcEEEEEEccccchhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeE
Q 040908 443 AATNHFDVANKIGEGGFGPVYKGLLA----DGTLIAVKQLSAKSKQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQL 517 (790)
Q Consensus 443 ~~~~~y~~~~~LG~G~fG~Vy~g~~~----~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 517 (790)
...++|++.+.||+|+||.||+|+.+ .++.||+|++.... ....+.+|+++|+.+ +|||||++++++.+.+..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 45688999999999999999999742 46789999986542 345688999999988 699999999999999999
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCC-CCeEEeecCCc
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKD-LNPKISDFGLA 596 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~-~~~kl~DFGla 596 (790)
++||||+++|+|.+++ ..+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|
T Consensus 96 ~lvmE~~~g~~L~~~~-------~~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 96 VIAMPYLEHESFLDIL-------NSLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp EEEEECCCCCCHHHHH-------TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEeCCCcccHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 9999999999999998 24889999999999999999999985 9999999999999877 79999999999
Q ss_pred cccCCCCc---------------------------ceeeccccCCCcccHHHhhcC-CCCChhhHHHHHHHHHHHHhCCC
Q 040908 597 KLDEEDNT---------------------------HISTRVAGTFGYMAPEYAMRG-HLTDKADVYSFGIVALEIVSGRS 648 (790)
Q Consensus 597 ~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~elltG~~ 648 (790)
+....... ...+..+||+.|+|||++.+. .++.++||||+||++|||+||+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 85443211 112335799999999999875 58999999999999999999999
Q ss_pred CCcccc
Q 040908 649 NIMCKT 654 (790)
Q Consensus 649 p~~~~~ 654 (790)
||....
T Consensus 246 Pf~~~~ 251 (361)
T 4f9c_A 246 PFYKAS 251 (361)
T ss_dssp SSSCCS
T ss_pred CCCCCC
Confidence 996543
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2e-43 Score=409.72 Aligned_cols=252 Identities=23% Similarity=0.342 Sum_probs=208.4
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEY 523 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 523 (790)
.++|++.+.||+|+||.||+|.. .+|+.||+|++........+.+.+|+.+|+.++|||||++++++.+.+.+++||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 36899999999999999999995 46899999999776555567789999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCC--CCeEEeecCCccccCC
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKD--LNPKISDFGLAKLDEE 601 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~--~~~kl~DFGla~~~~~ 601 (790)
|++|+|.+++.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+....
T Consensus 236 ~~gg~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 236 MSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCCBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred cCCCcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 999999999943 2346899999999999999999999985 9999999999999854 8999999999997755
Q ss_pred CCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPN 681 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 681 (790)
... ....+||+.|||||++.+..|+.++||||+||++|||++|+.||......+....+ ......+ ++.
T Consensus 310 ~~~--~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i-----~~~~~~~----~~~ 378 (573)
T 3uto_A 310 KQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV-----KSCDWNM----DDS 378 (573)
T ss_dssp TSE--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH-----HTTCCCC----CSG
T ss_pred CCc--eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-----HhCCCCC----Ccc
Confidence 432 34467999999999999999999999999999999999999999765433221110 0111111 111
Q ss_pred CCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 682 LGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 682 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
... ....++.+++..||+.||.+|||+.|+++
T Consensus 379 ~~~----~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 379 AFS----GISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GGT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccc----CCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111 12346788999999999999999999976
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.4e-43 Score=403.78 Aligned_cols=248 Identities=26% Similarity=0.309 Sum_probs=198.9
Q ss_pred cCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHH---HHHHhhccCCCceeeeeeEEEeCCeEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVN---EIGTISALQHPHLVKLYGCCIEGNQLL 518 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~---E~~~l~~l~H~niv~l~g~~~~~~~~~ 518 (790)
++|++.+.||+|+||.||+|+.. +|+.||||++.+.. ......+.+ ++.+++.++|||||++++++.+.+.+|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 67999999999999999999954 68999999996532 222233334 466777889999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccc
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 598 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~ 598 (790)
+|||||+||+|.++|. ....+++..+..++.||+.||+|||+.+ ||||||||+||||+.+|++||+|||+|+.
T Consensus 269 lVmEy~~GGdL~~~l~----~~~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLS----QHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEECCCCSCBHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeee
Confidence 9999999999999993 2357999999999999999999999985 99999999999999999999999999987
Q ss_pred cCCCCcceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 599 DEEDNTHISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 599 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
..... ....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||..........+.... ....
T Consensus 342 ~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i----~~~~---- 410 (689)
T 3v5w_A 342 FSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT----LTMA---- 410 (689)
T ss_dssp CSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH----HHCC----
T ss_pred cCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh----cCCC----
Confidence 65433 234689999999999975 57999999999999999999999999765433322111111 0111
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPL-----MSSVVS 717 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~ev~~ 717 (790)
..... ....++.+++..|++.||.+|++ +.||.+
T Consensus 411 --~~~p~----~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 411 --VELPD----SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp --CCCCT----TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred --CCCCc----cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 11112 22346788999999999999998 677754
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-42 Score=371.31 Aligned_cols=259 Identities=27% Similarity=0.439 Sum_probs=210.4
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEY 523 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 523 (790)
.++|.+.+.||+|+||.||+|... +++.||+|++........+.|.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 367899999999999999999964 6899999998776666678899999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCC
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 603 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~ 603 (790)
+++|+|.+++.. ....++|..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 89 ~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 89 IKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp CTTCBHHHHHHH---CCTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 999999999943 2356899999999999999999999985 9999999999999999999999999998654332
Q ss_pred cce-------------eeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHh
Q 040908 604 THI-------------STRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKE 670 (790)
Q Consensus 604 ~~~-------------~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~ 670 (790)
... .....||+.|+|||++.+..++.++|||||||++|||++|..|+.................
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~--- 239 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGF--- 239 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHH---
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcc---
Confidence 211 1145799999999999999999999999999999999999998865332221110000000
Q ss_pred hCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 671 QGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 671 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
.+...... ....+.+++..||+.||.+|||+.|+++.|+...
T Consensus 240 -------~~~~~~~~----~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 240 -------LDRYCPPN----CPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp -------HHHTCCTT----CCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------ccccCCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00011111 1235788999999999999999999999998754
No 23
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.4e-41 Score=363.61 Aligned_cols=250 Identities=25% Similarity=0.467 Sum_probs=208.3
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEY 523 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 523 (790)
.++|++.+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46899999999999999999984 57899999999776666677899999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCC
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 603 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~ 603 (790)
+++|+|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 99 ~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 99 LAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp CTTCBHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 99999999993 235899999999999999999999985 9999999999999999999999999998665433
Q ss_pred cceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCCCC
Q 040908 604 THISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLG 683 (790)
Q Consensus 604 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 683 (790)
.. .....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... .....+.. ..
T Consensus 171 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~------~~~~~~~~-~~------ 236 (297)
T 3fxz_A 171 SK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY------LIATNGTP-EL------ 236 (297)
T ss_dssp CC-BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HHHHHCSC-CC------
T ss_pred cc-cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHHhCCCC-CC------
Confidence 32 334679999999999999999999999999999999999999997543322111 11111110 00
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 684 SNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 684 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..+......+.+++..||+.||.+|||+.|+++
T Consensus 237 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 237 -QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -CCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 112233456788999999999999999999876
No 24
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=5.6e-41 Score=360.05 Aligned_cols=282 Identities=38% Similarity=0.627 Sum_probs=231.4
Q ss_pred CCCccHHHHHHHhcCccee------eeecccCcEEEEeeeecCCcEEEEEEccccc----hhcHHHHHHHHHHhhccCCC
Q 040908 433 TGSFTLRQIKAATNHFDVA------NKIGEGGFGPVYKGLLADGTLIAVKQLSAKS----KQGNREFVNEIGTISALQHP 502 (790)
Q Consensus 433 ~~~~~~~~~~~~~~~y~~~------~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~H~ 502 (790)
...|++.++..++++|... +.||+|+||.||+|.. +++.||||++.... ....+.+.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4678999999999999877 8999999999999987 57899999986532 23356799999999999999
Q ss_pred ceeeeeeEEEeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe
Q 040908 503 HLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL 582 (790)
Q Consensus 503 niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl 582 (790)
||+++++++.+.+..++||||+++|+|.+++.... ....++|..+..++.|++.||+|||+.+ |+||||||+||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence 99999999999999999999999999999995432 2356999999999999999999999985 9999999999999
Q ss_pred cCCCCeEEeecCCccccCCCCcc-eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhH
Q 040908 583 DKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYL 661 (790)
Q Consensus 583 ~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l 661 (790)
++++.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||........ +
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~ 243 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--L 243 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--T
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--H
Confidence 99999999999999866543322 2334679999999998764 588999999999999999999999976543321 2
Q ss_pred HHHHHHHH-hhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 662 LDWALLLK-EQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 662 ~~~~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
..+..... ....+.+.+++.+ ...+......+.+++..||+.+|.+||++.+|++.|+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 22222222 2233445555544 3456677888999999999999999999999999998754
No 25
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4e-41 Score=364.19 Aligned_cols=263 Identities=27% Similarity=0.441 Sum_probs=215.3
Q ss_pred CCCCccHHHHHHHhcC----------cceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccC
Q 040908 432 QTGSFTLRQIKAATNH----------FDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQ 500 (790)
Q Consensus 432 ~~~~~~~~~~~~~~~~----------y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~ 500 (790)
..+.++.++++.+++. |+..+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~ 100 (321)
T 2c30_A 21 QSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ 100 (321)
T ss_dssp ----CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCC
T ss_pred cCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCC
Confidence 4567888998888764 788889999999999999965 79999999997666666778999999999999
Q ss_pred CCceeeeeeEEEeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcE
Q 040908 501 HPHLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNV 580 (790)
Q Consensus 501 H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NI 580 (790)
||||+++++++...+..++||||+++++|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+||
T Consensus 101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NI 172 (321)
T 2c30_A 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSI 172 (321)
T ss_dssp CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGE
T ss_pred CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHE
Confidence 9999999999999999999999999999999983 246899999999999999999999985 99999999999
Q ss_pred EecCCCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhh
Q 040908 581 LLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFY 660 (790)
Q Consensus 581 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~ 660 (790)
|++.++.+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~-- 249 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-- 249 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--
T ss_pred EECCCCcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--
Confidence 9999999999999999866543222 2346799999999999999999999999999999999999999975432211
Q ss_pred HHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 661 LLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 661 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. .. .... .+.+. ........+.+++.+||+.||.+|||+.|+++
T Consensus 250 -~~---~~-~~~~-----~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 250 -MK---RL-RDSP-----PPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp -HH---HH-HHSS-----CCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HH---HH-hcCC-----CCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 11 1111 11111 11122346788999999999999999999976
No 26
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.5e-41 Score=355.50 Aligned_cols=258 Identities=29% Similarity=0.467 Sum_probs=213.5
Q ss_pred HhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEe
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEY 523 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 523 (790)
..++|++.+.||+|+||.||+|...++..||+|++.... ...+++.+|+.++.+++||||+++++++.+.+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 356899999999999999999998888899999997543 3356789999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCC
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 603 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~ 603 (790)
+++++|.+++. .....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~~~L~~~l~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 85 ISNGCLLNYLR---SHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp CTTCBHHHHHH---HHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred cCCCcHHHHHH---HcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 99999999994 23346899999999999999999999985 9999999999999999999999999998766554
Q ss_pred cceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccccCCCC
Q 040908 604 THISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNL 682 (790)
Q Consensus 604 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 682 (790)
........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||......... .... .+. ....+
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~------~~~~-~~~--~~~~~-- 227 (268)
T 3sxs_A 159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV------LKVS-QGH--RLYRP-- 227 (268)
T ss_dssp EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH------HHHH-TTC--CCCCC--
T ss_pred hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHH------HHHH-cCC--CCCCC--
Confidence 443444557788999999999899999999999999999999 99999754332211 1111 111 11111
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 683 GSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 683 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
. .....+.+++..||+.+|.+|||+.|+++.|+....
T Consensus 228 -~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 228 -H----LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp -T----TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred -C----cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 1 123467889999999999999999999999998754
No 27
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=369.05 Aligned_cols=258 Identities=27% Similarity=0.442 Sum_probs=208.1
Q ss_pred hcCcceeeeecccCcEEEEeeeec----CCcEEEEEEcccc-chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA----DGTLIAVKQLSAK-SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~----~g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
.++|++.+.||+|+||.||+|... .+..||||++... .....+.|.+|+.++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 467899999999999999999964 3556999999764 33445679999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 128 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 99999999999999432 346899999999999999999999985 999999999999999999999999999876
Q ss_pred CCCCcc--eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 600 EEDNTH--ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 600 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
...... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+.. .... .+.
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~------~~~~-~~~--- 271 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI------SSVE-EGY--- 271 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH------HHHH-TTC---
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHH------HHHH-cCC---
Confidence 543322 2223456789999999999999999999999999999999 99999654332211 1111 110
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
. ...+......+.+++..||+.||.+||++.||++.|+....
T Consensus 272 --~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~ 313 (325)
T 3kul_A 272 --R----LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313 (325)
T ss_dssp --C----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --C----CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0 11122234568899999999999999999999999998654
No 28
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.9e-42 Score=369.47 Aligned_cols=264 Identities=25% Similarity=0.378 Sum_probs=205.9
Q ss_pred hcCcceeeeecccCcEEEEeeee-----cCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeC--CeE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-----ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEG--NQL 517 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-----~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 517 (790)
.++|++.+.||+|+||.||+|.+ .+++.||||++........+.+.+|+.++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46899999999999999999984 36889999999876666677899999999999999999999998653 458
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 89 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp EEEEECCTTCBHHHHHHH---CGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred EEEEEeCCCCCHHHHHHh---cccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 999999999999999943 2345899999999999999999999985 9999999999999999999999999998
Q ss_pred ccCCCCcc--eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccch---------hhHHHHHH
Q 040908 598 LDEEDNTH--ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEK---------FYLLDWAL 666 (790)
Q Consensus 598 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~---------~~l~~~~~ 666 (790)
........ ......+|..|+|||++.+..++.++||||||+++|||+||..|+........ ........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 76543321 22334577889999999999999999999999999999999998864321100 00000111
Q ss_pred HHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 667 LLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 667 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
.... .......+......+.+++..||+.||.+|||+.|+++.|+...
T Consensus 243 ~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~ 290 (295)
T 3ugc_A 243 ELLK---------NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290 (295)
T ss_dssp HHHH---------TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHh---------ccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 1111 11111122233457889999999999999999999999998753
No 29
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=8.7e-42 Score=367.34 Aligned_cols=270 Identities=27% Similarity=0.427 Sum_probs=206.0
Q ss_pred ccHHHHHHHhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEe
Q 040908 436 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIE 513 (790)
Q Consensus 436 ~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 513 (790)
+...++....++|++.+.||+|+||.||+|.. +|+.||||++.... ....+.|.+|+.++++++||||+++++++..
T Consensus 27 ~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 105 (309)
T 3p86_A 27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ 105 (309)
T ss_dssp -----CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CCcccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE
Confidence 33444445567899999999999999999987 57899999986543 3334678999999999999999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeec
Q 040908 514 GNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDF 593 (790)
Q Consensus 514 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DF 593 (790)
.+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+.+ ++|+||||||+|||++.++.+||+||
T Consensus 106 ~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 106 PPNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp TTCCEEEEECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred CCceEEEEecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCC
Confidence 9999999999999999999954321 234899999999999999999999874 34999999999999999999999999
Q ss_pred CCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCC
Q 040908 594 GLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGN 673 (790)
Q Consensus 594 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 673 (790)
|+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .. .....
T Consensus 184 g~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~---~~---~~~~~ 256 (309)
T 3p86_A 184 GLSRLKASTFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA---AV---GFKCK 256 (309)
T ss_dssp C------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH---HH---HHSCC
T ss_pred CCCcccccccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HH---HhcCC
Confidence 99985543321 2234679999999999999999999999999999999999999997544322111 11 01111
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 674 LMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 674 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
. .. .+......+.+++.+||+.+|.+|||+.|+++.|+....
T Consensus 257 ~-----~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 257 R-----LE----IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp C-----CC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred C-----CC----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1 11 112233467889999999999999999999999987654
No 30
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1e-41 Score=368.90 Aligned_cols=267 Identities=27% Similarity=0.351 Sum_probs=206.8
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCC----eEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGN----QLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lV 520 (790)
.++|++.+.||+|+||.||+|... ++.||||++..... ....+..|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 468999999999999999999875 78999999965433 3345667999999999999999999998743 47999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcC-------CCcEEeccCCCCcEEecCCCCeEEeec
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEES-------RLKIVHRDIKATNVLLDKDLNPKISDF 593 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~-------~~~iiHrDlk~~NILl~~~~~~kl~DF 593 (790)
|||+++|+|.+++. ...++|..+..++.|++.||+|||+.. .++|+||||||+|||++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLK-----ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 99999999999993 235899999999999999999999861 124999999999999999999999999
Q ss_pred CCccccCCCCcc-eeeccccCCCcccHHHhhcC-----CCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHH-----
Q 040908 594 GLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRG-----HLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLL----- 662 (790)
Q Consensus 594 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~----- 662 (790)
|+++........ ......||+.|+|||++.+. .++.++|||||||++|||+||+.||............
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 999866543322 22335799999999999863 4556889999999999999999999764432211111
Q ss_pred -----HHHHHHHhhCCcccccCCCCCCCC-cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 663 -----DWALLLKEQGNLMELVDPNLGSNV-DKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 663 -----~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
.+...... ....+.+.... .......+.+++.+||+.||.+|||+.||++.|+.+.
T Consensus 256 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 256 HPSLEDMQEVVVH-----KKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp SCCHHHHHHHHTT-----SCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCchhhhhhhhhc-----ccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111100 11111111111 2245667999999999999999999999999998653
No 31
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.4e-41 Score=373.31 Aligned_cols=260 Identities=26% Similarity=0.409 Sum_probs=210.3
Q ss_pred hcCcceeeeecccCcEEEEeeee--------cCCcEEEEEEccccc-hhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeC
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL--------ADGTLIAVKQLSAKS-KQGNREFVNEIGTISAL-QHPHLVKLYGCCIEG 514 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~--------~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 514 (790)
.++|++.+.||+|+||.||+|.. .++..||||+++... ....+.+.+|+.+++++ +||||++++++|...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 47899999999999999999975 235679999997653 33456799999999999 899999999999999
Q ss_pred CeEEEEEEeccCCChhhhhcCCcc------------ccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe
Q 040908 515 NQLLLIYEYLENNSLARALFGPEE------------HRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL 582 (790)
Q Consensus 515 ~~~~lV~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl 582 (790)
+..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||+.+ |+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 999999999999999999953221 1235899999999999999999999985 9999999999999
Q ss_pred cCCCCeEEeecCCccccCCCCcc-eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhh
Q 040908 583 DKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFY 660 (790)
Q Consensus 583 ~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~ 660 (790)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||......+...
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~ 316 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 99999999999999865443221 2233457889999999999999999999999999999999 999997544332211
Q ss_pred HHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 661 LLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 661 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
. ...+.. + ..+......+.+++..||+.+|.+||++.|+++.|+.+.
T Consensus 317 ------~-~~~~~~-----~----~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 317 ------L-LKEGHR-----M----DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp ------H-HHTTCC-----C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------H-HhcCCC-----C----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 111111 1 112223456888999999999999999999999998764
No 32
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.8e-41 Score=356.84 Aligned_cols=256 Identities=26% Similarity=0.469 Sum_probs=210.9
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEec
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYL 524 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 524 (790)
.++|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 46799999999999999999998888999999997543 33567999999999999999999999999999999999999
Q ss_pred cCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCCc
Q 040908 525 ENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 604 (790)
Q Consensus 525 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 604 (790)
++++|.+++.. ....+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 88 ~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 88 EHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp TTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCcHHHHHHh---cCcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 99999999943 2346899999999999999999999985 99999999999999999999999999986654332
Q ss_pred ceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccccCCCCC
Q 040908 605 HISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLG 683 (790)
Q Consensus 605 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 683 (790)
.......+|+.|+|||++....++.++||||||+++|||++ |+.||......+.. ..... + .....
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~------~~~~~-~-----~~~~~- 228 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------EDIST-G-----FRLYK- 228 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH------HHHHT-T-----CCCCC-
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHH------HHHhc-C-----ccCCC-
Confidence 22334557889999999999999999999999999999999 99999754332211 11111 1 00111
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 684 SNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 684 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
+......+.+++..|++.+|.+||++.|+++.|++..
T Consensus 229 ---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 229 ---PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp ---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 1112346788999999999999999999999998753
No 33
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.8e-41 Score=360.71 Aligned_cols=262 Identities=26% Similarity=0.361 Sum_probs=206.4
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.|.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 46899999999999999999985 468899999985432 23346789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++++|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIE----SHGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999993 2356899999999999999999999985 9999999999999999999999999998765
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
...........||+.|+|||.+.+..++.++|||||||++|||+||+.||......... .... ....... ..
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~------~~~~-~~~~~~~-~~ 234 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA------IKHI-QDSVPNV-TT 234 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH------HHHH-SSCCCCH-HH
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHh-hccCCCc-ch
Confidence 54433344567999999999999999999999999999999999999999754322110 0101 1111100 00
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhcCcCC
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRP-LMSSVVSMLEGRVGV 725 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~ev~~~L~~~~~~ 725 (790)
.... .....+.+++.+|++.||.+|| ++.++.+.|+.....
T Consensus 235 ~~~~----~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 235 DVRK----DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp HSCT----TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred hccc----CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 1111 2235688899999999999999 899999999876653
No 34
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.2e-41 Score=383.92 Aligned_cols=261 Identities=28% Similarity=0.429 Sum_probs=213.4
Q ss_pred HHHHhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 441 IKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 441 ~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
++...++|++.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.++++++|||||++++++. .+..++|
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 445567899999999999999999999888999999997643 34678999999999999999999999986 5678999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 261 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp ECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 99999999999995332 246889999999999999999999985 9999999999999999999999999998764
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccccC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVD 679 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 679 (790)
...........+|+.|+|||++....++.++|||||||++|||+| |+.||......+.. . .......+
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~---~---~i~~~~~~----- 404 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI---R---ALERGYRM----- 404 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH---H---HHHHTCCC-----
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHH---H---HHHcCCCC-----
Confidence 432222233457789999999999999999999999999999999 99999754332211 1 11111111
Q ss_pred CCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 680 PNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 680 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
..+......+.+++..||+.||.+|||+.+|++.|+....
T Consensus 405 -----~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 405 -----PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred -----CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 1112234568899999999999999999999999998754
No 35
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=9.1e-41 Score=362.31 Aligned_cols=247 Identities=24% Similarity=0.352 Sum_probs=204.7
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46899999999999999999996 57899999998654 2334567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+++|+|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLV----AHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 9999999999993 2356899999999999999999999985 99999999999999999999999999986654
Q ss_pred CCcceeeccccCCCcccHHHhhcCCCC-ChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHLT-DKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
... .....||+.|+|||++.+..+. .++|||||||++|||++|+.||......+.. ... ..+..
T Consensus 167 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~------~~i-~~~~~------ 231 (328)
T 3fe3_A 167 GGK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR------ERV-LRGKY------ 231 (328)
T ss_dssp SCG--GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHH-HHCCC------
T ss_pred CCc--cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHH------HHH-HhCCC------
Confidence 332 2456799999999999988775 7899999999999999999999765432211 111 11111
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. +......+.+++..|++.||.+|||+.|+++
T Consensus 232 ~~----p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 232 RI----PFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp CC----CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CC----CCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11 1122345778999999999999999999976
No 36
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.3e-41 Score=376.30 Aligned_cols=257 Identities=25% Similarity=0.409 Sum_probs=208.3
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
..++|++.+.||+|+||.||+|.+. +++.||||++.... ......|.+|+.++++++||||++++++|...+..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3568899999999999999999975 68999999987543 233456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+++|+|.+++. .....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 192 e~~~~g~L~~~l~---~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 192 ELVQGGDFLTFLR---TEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp ECCTTCBHHHHHH---HHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EcCCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 9999999999994 23346899999999999999999999985 99999999999999999999999999986443
Q ss_pred CCccee-eccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccccC
Q 040908 602 DNTHIS-TRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVD 679 (790)
Q Consensus 602 ~~~~~~-~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 679 (790)
...... ....+++.|+|||++..+.++.++|||||||++|||+| |+.||......+.. . ....+..
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~---~----~~~~~~~----- 333 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR---E----FVEKGGR----- 333 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHH---H----HHHTTCC-----
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH---H----HHHcCCC-----
Confidence 221111 11235778999999999999999999999999999999 99998754322211 1 1111111
Q ss_pred CCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040908 680 PNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGR 722 (790)
Q Consensus 680 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~ 722 (790)
...+......+.+++..||+.||.+|||+.++++.|+.+
T Consensus 334 ----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 372 (377)
T 3cbl_A 334 ----LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372 (377)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 111122345678899999999999999999999999865
No 37
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.4e-41 Score=373.67 Aligned_cols=258 Identities=26% Similarity=0.472 Sum_probs=198.2
Q ss_pred hcCcceeeeecccCcEEEEeeeec----CCcEEEEEEcccc-chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA----DGTLIAVKQLSAK-SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~----~g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
.++|++.+.||+|+||.||+|... ++..||||+++.. .....+.|.+|+.++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357899999999999999999864 5678999999764 33345679999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
||||+++|+|.+++.. ....+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 124 v~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 124 VTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 9999999999999953 2346899999999999999999999985 999999999999999999999999999876
Q ss_pred CCCCcce--eeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 600 EEDNTHI--STRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 600 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
....... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+.. . .. ..+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~---~---~i-~~~~--- 267 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI---K---AV-DEGY--- 267 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHH---H---HH-HTTE---
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH---H---HH-HcCC---
Confidence 5433221 122345788999999999999999999999999999998 99999654322211 1 11 1110
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
....+......+.+++..||+.||.+||++.||+++|+....
T Consensus 268 ------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 268 ------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp ------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 001112234568899999999999999999999999987654
No 38
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-41 Score=367.67 Aligned_cols=250 Identities=22% Similarity=0.360 Sum_probs=196.6
Q ss_pred HhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
..++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.++++++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 457899999999999999999995 578999999986543 223456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++.....
T Consensus 88 E~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 88 EYCPGGELFDYII----SQDRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp ECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred eCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 9999999999983 2356999999999999999999999985 99999999999999999999999999986554
Q ss_pred CCcceeeccccCCCcccHHHhhcCCC-CChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHL-TDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
..........||+.|+|||++.+..+ +.++|||||||++|||++|+.||......+.. .... .+..
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~------~~i~-~~~~------ 227 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALY------KKIM-RGKY------ 227 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHHH-HTCC------
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH------HHHH-cCCC------
Confidence 43333445679999999999988775 88999999999999999999999754322211 1111 1111
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.... .....+.+++.+||+.||.+|||+.|+++
T Consensus 228 ~~p~----~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 228 DVPK----WLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp CCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCC----CCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 1111 12345678999999999999999999986
No 39
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.6e-41 Score=381.48 Aligned_cols=263 Identities=21% Similarity=0.272 Sum_probs=211.2
Q ss_pred cHHHHHHHhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccch---hcHHHHHHHHHHhhccCCCceeeeeeEEE
Q 040908 437 TLRQIKAATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK---QGNREFVNEIGTISALQHPHLVKLYGCCI 512 (790)
Q Consensus 437 ~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 512 (790)
.++++...+++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++..++||||++++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 45566677899999999999999999999965 478999999965321 22334889999999999999999999999
Q ss_pred eCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEee
Q 040908 513 EGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISD 592 (790)
Q Consensus 513 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 592 (790)
+.+..++||||+++|+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcc
Confidence 999999999999999999999532 356899999999999999999999985 99999999999999999999999
Q ss_pred cCCccccCCCCcceeeccccCCCcccHHHhh-----cCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHH
Q 040908 593 FGLAKLDEEDNTHISTRVAGTFGYMAPEYAM-----RGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALL 667 (790)
Q Consensus 593 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~ 667 (790)
||+|+.............+||+.|+|||++. ...++.++|||||||++|||++|+.||......+....+ ..
T Consensus 219 FGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i---~~ 295 (437)
T 4aw2_A 219 FGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI---MN 295 (437)
T ss_dssp CTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HT
T ss_pred hhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhh---hh
Confidence 9999876655544445578999999999997 467899999999999999999999999765433222111 00
Q ss_pred HHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 040908 668 LKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTN--RPLMSSVVS 717 (790)
Q Consensus 668 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~ev~~ 717 (790)
....-.. |...... ..++.+++..|+..+|.+ ||++.|+++
T Consensus 296 ~~~~~~~-----p~~~~~~----s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 296 HKERFQF-----PTQVTDV----SENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHHCCC-----CSSCCCS----CHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ccccccC-----CcccccC----CHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 0000111 1111112 345778888999888888 999999876
No 40
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=8.7e-41 Score=361.85 Aligned_cols=252 Identities=28% Similarity=0.406 Sum_probs=201.8
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccch-hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK-QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999865 789999999865432 234568899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCC
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 602 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 602 (790)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 86 YCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp CCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred cCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 9999999999942 346899999999999999999999985 999999999999999999999999999865433
Q ss_pred Cc-ceeeccccCCCcccHHHhhcCCC-CChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 603 NT-HISTRVAGTFGYMAPEYAMRGHL-TDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 603 ~~-~~~~~~~gt~~y~aPE~~~~~~~-s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
.. .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ....|.. ... ..
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~----~~~---~~-- 228 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWKE----KKT---YL-- 228 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHHHHT----TCT---TS--
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHHhc----ccc---cC--
Confidence 22 22335679999999999988765 7799999999999999999999975443221 1111111 000 00
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.........+.+++.+|++.||.+|||+.|+++
T Consensus 229 ----~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 229 ----NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp ----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----CccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 001123346778999999999999999999876
No 41
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.6e-41 Score=355.16 Aligned_cols=257 Identities=24% Similarity=0.402 Sum_probs=208.4
Q ss_pred HhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEe
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEY 523 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 523 (790)
..++|++.+.||+|+||.||+|...++..||+|++.... ...+++.+|++++.+++||||+++++++.+.+..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 457899999999999999999999888899999997543 2356789999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCC
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 603 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~ 603 (790)
+++++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 101 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 101 MANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp CTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred cCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 9999999999532 346899999999999999999999985 9999999999999999999999999998664433
Q ss_pred cceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccccCCCC
Q 040908 604 THISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNL 682 (790)
Q Consensus 604 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 682 (790)
........+|+.|+|||++.+..++.++||||||+++|||+| |+.||......... ..... + .....
T Consensus 175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~------~~~~~-~-----~~~~~ 242 (283)
T 3gen_A 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA------EHIAQ-G-----LRLYR 242 (283)
T ss_dssp HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH------HHHHT-T-----CCCCC
T ss_pred cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHH------HHHhc-c-----cCCCC
Confidence 222233457888999999999999999999999999999998 99999754332211 11111 1 01111
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 683 GSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 683 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
+......+.+++..||+.+|.+|||+.|+++.|+...
T Consensus 243 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 243 ----PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp ----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 1112346788999999999999999999999998654
No 42
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5.7e-41 Score=384.40 Aligned_cols=260 Identities=23% Similarity=0.410 Sum_probs=214.2
Q ss_pred HHhcCcceeeeecccCcEEEEeeeecC-CcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 443 AATNHFDVANKIGEGGFGPVYKGLLAD-GTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 443 ~~~~~y~~~~~LG~G~fG~Vy~g~~~~-g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
...++|++.+.||+|+||.||+|.+.. +..||||+++... ...++|.+|+.+|++++|||||+++++|...+..++||
T Consensus 217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 345679999999999999999999764 8899999997643 34678999999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+++|+|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 296 E~~~~g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 296 EFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp ECCTTCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EccCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 999999999999532 2346899999999999999999999985 99999999999999999999999999997654
Q ss_pred CCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
..........+|+.|+|||++....++.++|||||||++|||+| |+.||......+.. . . ...+
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~---~---~-~~~~-------- 435 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY---E---L-LEKD-------- 435 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH---H---H-HHTT--------
T ss_pred CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHH---H---H-HHcC--------
Confidence 43333334457789999999999999999999999999999999 99999754432211 1 1 1111
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
.....+......+.+++.+||+.||.+||++.+|++.|+....
T Consensus 436 -~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 436 -YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred -CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 1111222334568889999999999999999999999998653
No 43
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.9e-41 Score=371.98 Aligned_cols=271 Identities=25% Similarity=0.373 Sum_probs=215.8
Q ss_pred CccHHHHHHHhcCcceeeeecccCcEEEEeeee------cCCcEEEEEEccccc-hhcHHHHHHHHHHhhcc-CCCceee
Q 040908 435 SFTLRQIKAATNHFDVANKIGEGGFGPVYKGLL------ADGTLIAVKQLSAKS-KQGNREFVNEIGTISAL-QHPHLVK 506 (790)
Q Consensus 435 ~~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~------~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~ 506 (790)
.+...+++...++|++.+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|++++.++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 456667777889999999999999999999973 346789999997643 33456799999999999 7999999
Q ss_pred eeeEEEeCC-eEEEEEEeccCCChhhhhcCCccc----------------------------------------------
Q 040908 507 LYGCCIEGN-QLLLIYEYLENNSLARALFGPEEH---------------------------------------------- 539 (790)
Q Consensus 507 l~g~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~---------------------------------------------- 539 (790)
++++|.+.+ ..++||||+++|+|.+++......
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999998755 489999999999999999654321
Q ss_pred ----------------cCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCC
Q 040908 540 ----------------RLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 603 (790)
Q Consensus 540 ----------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~ 603 (790)
...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 122889999999999999999999985 9999999999999999999999999998654433
Q ss_pred c-ceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccccCCC
Q 040908 604 T-HISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPN 681 (790)
Q Consensus 604 ~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 681 (790)
. .......||+.|+|||++.+..++.++|||||||++|||+| |+.||......+.. ......+.. ..
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~------~~~~~~~~~-----~~ 316 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------CRRLKEGTR-----MR 316 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH------HHHHHHTCC-----CC
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHH------HHHHHcCCC-----CC
Confidence 2 23344668999999999999999999999999999999999 99999765433211 111111111 11
Q ss_pred CCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 682 LGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 682 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
... ....++.+++..||+.||.+|||+.|+++.|+...
T Consensus 317 ~~~----~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 317 APD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 111 22346788999999999999999999999998754
No 44
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.5e-40 Score=355.43 Aligned_cols=264 Identities=25% Similarity=0.371 Sum_probs=201.7
Q ss_pred HhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhc--cCCCceeeeeeEEEeC----CeE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISA--LQHPHLVKLYGCCIEG----NQL 517 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~----~~~ 517 (790)
..++|++.+.||+|+||.||+|.. +|+.||||++... ....+..|.+++.. ++||||+++++++... ...
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 357899999999999999999998 6889999998653 33455667666665 7999999999997653 458
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcC-----CCcEEeccCCCCcEEecCCCCeEEee
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEES-----RLKIVHRDIKATNVLLDKDLNPKISD 592 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~-----~~~iiHrDlk~~NILl~~~~~~kl~D 592 (790)
++||||+++|+|.+++. ...+++..++.++.|++.||+|||+.. ..+|+||||||+|||++.++.+||+|
T Consensus 82 ~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EEEECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECC
T ss_pred EEehhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEee
Confidence 99999999999999993 246899999999999999999999211 23699999999999999999999999
Q ss_pred cCCccccCCCCcce---eeccccCCCcccHHHhhcC------CCCChhhHHHHHHHHHHHHhC----------CCCCccc
Q 040908 593 FGLAKLDEEDNTHI---STRVAGTFGYMAPEYAMRG------HLTDKADVYSFGIVALEIVSG----------RSNIMCK 653 (790)
Q Consensus 593 FGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~s~ksDV~S~Gvvl~elltG----------~~p~~~~ 653 (790)
||+++......... .....||+.|+|||++.+. .++.++|||||||++|||+|| +.||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 99998654433322 2234799999999999876 445699999999999999999 7777543
Q ss_pred cccchhhHHHHHHHHHhhCCcccccCCCCCC-CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040908 654 TKEEKFYLLDWALLLKEQGNLMELVDPNLGS-NVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGR 722 (790)
Q Consensus 654 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~ 722 (790)
...... ............ ..+.... .........+.+++..||+.||.+|||+.||++.|+.+
T Consensus 237 ~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 237 VPNDPS-FEDMRKVVCVDQ-----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCSSCC-HHHHHHHHTTSC-----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCcc-hhhhhHHHhccC-----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 222111 111111111111 1111111 12335678899999999999999999999999999853
No 45
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.1e-40 Score=350.88 Aligned_cols=253 Identities=26% Similarity=0.457 Sum_probs=197.0
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccch----hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSK----QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|++.+.||+|+||.||+|... |+.||||++..... ...+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 468999999999999999999975 88999999875432 2346789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC--------CCCeEEee
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK--------DLNPKISD 592 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~--------~~~~kl~D 592 (790)
|||+++++|.+++. ...+++..+..++.|++.||+|||+.+..+|+||||||+|||++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 99999999999983 246899999999999999999999986555999999999999986 77899999
Q ss_pred cCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhC
Q 040908 593 FGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQG 672 (790)
Q Consensus 593 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~ 672 (790)
||+++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||......... ... ...
T Consensus 160 fg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~------~~~-~~~ 229 (271)
T 3dtc_A 160 FGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA------YGV-AMN 229 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH------HHH-HTS
T ss_pred CCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------Hhh-hcC
Confidence 999986543322 2356999999999999999999999999999999999999999754322111 000 111
Q ss_pred CcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040908 673 NLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEG 721 (790)
Q Consensus 673 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~ 721 (790)
.. ....+......+.+++..||+.||.+|||+.|+++.|+.
T Consensus 230 ~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 230 KL--------ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp CC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred CC--------CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 11 111122234568899999999999999999999999975
No 46
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1e-40 Score=378.15 Aligned_cols=260 Identities=29% Similarity=0.463 Sum_probs=206.9
Q ss_pred HHHhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 442 KAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 442 ~~~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
+...++|++.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.++++++||||+++++++.+ +..++||
T Consensus 180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 34567899999999999999999999888889999997643 335689999999999999999999999876 6789999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+++|+|.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 258 e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp CCCTTCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred hhhcCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 999999999999422 2346899999999999999999999985 99999999999999999999999999987654
Q ss_pred CCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
..........+|+.|+|||++..+.++.++|||||||++|||+| |+.||......+.. ... ..+.
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~------~~i-~~~~------- 398 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL------DQV-ERGY------- 398 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH------HHH-HTTC-------
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHH------HHH-HcCC-------
Confidence 33323334557889999999999999999999999999999999 99999754332211 111 1111
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
....+......+.+++..||+.||.+|||+.++++.|+....
T Consensus 399 --~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 399 --RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp --CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred --CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 011122334568899999999999999999999999998764
No 47
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=351.98 Aligned_cols=272 Identities=20% Similarity=0.258 Sum_probs=213.0
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCC--eEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGN--QLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV 520 (790)
.++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 367999999999999999999965 58999999997543 334567889999999999999999999998765 78999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe----cCCCCeEEeecCCc
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL----DKDLNPKISDFGLA 596 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl----~~~~~~kl~DFGla 596 (790)
|||+++++|.+++..... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 88 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EeCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 999999999999964322 234899999999999999999999985 9999999999999 78888999999999
Q ss_pred cccCCCCcceeeccccCCCcccHHHhh--------cCCCCChhhHHHHHHHHHHHHhCCCCCccccccchh-hHHHHHHH
Q 040908 597 KLDEEDNTHISTRVAGTFGYMAPEYAM--------RGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKF-YLLDWALL 667 (790)
Q Consensus 597 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~-~l~~~~~~ 667 (790)
+........ ....||+.|+|||++. +..++.++|||||||++|||+||+.||......... ....-...
T Consensus 164 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 164 RELEDDEQF--VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp EECCTTCCB--CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred eecCCCCce--eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 876554322 3456999999999986 467899999999999999999999999753322211 11111111
Q ss_pred HHhhCCccccc-----------CCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040908 668 LKEQGNLMELV-----------DPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGR 722 (790)
Q Consensus 668 ~~~~~~~~~~~-----------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~ 722 (790)
.........+. +-.............+.+++..||+.||++|||+.|+++...+.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 00000000000 01112245567788899999999999999999999999987654
No 48
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.5e-40 Score=359.22 Aligned_cols=260 Identities=20% Similarity=0.188 Sum_probs=208.5
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E 522 (790)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... ...+.+|+.+++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46899999999999999999995 5789999999865432 34588999999999 99999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCC-----eEEeecCCcc
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN-----PKISDFGLAK 597 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~-----~kl~DFGla~ 597 (790)
|+ +++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 86 LL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred eC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99 99999999422 357999999999999999999999985 999999999999998887 9999999998
Q ss_pred ccCCCCcc------eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhh
Q 040908 598 LDEEDNTH------ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQ 671 (790)
Q Consensus 598 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 671 (790)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....................
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~ 238 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA 238 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc
Confidence 65433221 123567999999999999999999999999999999999999999865433322222211111111
Q ss_pred CCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 672 GNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 672 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
...... ... .. ++.+++..||+.+|.+||++.+|.+.|+...
T Consensus 239 ~~~~~~-----~~~----~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 239 TPIEVL-----CEN----FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp SCHHHH-----TTT----CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred CCHHHH-----hcc----Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 111000 011 12 6889999999999999999999999998654
No 49
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4.1e-40 Score=361.67 Aligned_cols=252 Identities=22% Similarity=0.323 Sum_probs=205.1
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchh------cHHHHHHHHHHhhccCCCceeeeeeEEEeCCe
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQ------GNREFVNEIGTISALQHPHLVKLYGCCIEGNQ 516 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 516 (790)
..++|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3578999999999999999999964 6899999998764321 24678999999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCC----CeEEee
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL----NPKISD 592 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~----~~kl~D 592 (790)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|
T Consensus 90 ~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 9999999999999999942 346899999999999999999999985 99999999999998877 799999
Q ss_pred cCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhC
Q 040908 593 FGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQG 672 (790)
Q Consensus 593 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~ 672 (790)
||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .. ..+
T Consensus 163 FG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~-----~i--~~~ 233 (361)
T 2yab_A 163 FGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA-----NI--TAV 233 (361)
T ss_dssp CSSCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH-----HH--HTT
T ss_pred cCCceEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----HH--Hhc
Confidence 999987654322 234679999999999999899999999999999999999999997654322111 00 001
Q ss_pred CcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 673 NLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 673 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. . .++.. .......+.+++..|+..||.+|||+.|+++
T Consensus 234 ~~-~-~~~~~----~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 234 SY-D-FDEEF----FSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CC-C-CCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CC-C-CCchh----ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 0 00000 0112346788999999999999999999875
No 50
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.7e-40 Score=350.97 Aligned_cols=262 Identities=20% Similarity=0.240 Sum_probs=210.0
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E 522 (790)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+|+.++.++ +|+|++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46899999999999999999995 578999999986432 234578899999999 79999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCC-----eEEeecCCcc
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN-----PKISDFGLAK 597 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~-----~kl~DFGla~ 597 (790)
|+ +++|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 87 ~~-~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 87 LL-GPSLEDLLDL---CGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp CC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred ec-CCCHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99 9999999942 2346899999999999999999999885 999999999999987776 9999999998
Q ss_pred ccCCCCcc------eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhh
Q 040908 598 LDEEDNTH------ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQ 671 (790)
Q Consensus 598 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 671 (790)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....................
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS 239 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC
Confidence 66543221 224467999999999999999999999999999999999999999865433222222211111111
Q ss_pred CCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 672 GNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 672 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
....+. ... ....+.+++..||+.||.+||++.+|++.|+....
T Consensus 240 ~~~~~~-----~~~----~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 240 TPLREL-----CAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp SCHHHH-----TTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred ccHHHH-----Hhh----CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 111111 111 23567899999999999999999999999987653
No 51
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.8e-40 Score=359.89 Aligned_cols=257 Identities=26% Similarity=0.440 Sum_probs=201.4
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCc----EEEEEEcccc-chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGT----LIAVKQLSAK-SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLL 518 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~----~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 518 (790)
.++|++.+.||+|+||.||+|... +++ +||+|.+... .....+.|.+|+.++++++||||++++++|...+ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 357999999999999999999853 444 4688887543 3345678999999999999999999999998765 78
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccc
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 598 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~ 598 (790)
+|+||+.+|+|.+++.. ....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 93 LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCTTCBHHHHHHH---STTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeE
Confidence 99999999999999943 3356899999999999999999999985 99999999999999999999999999986
Q ss_pred cCCCCcc-eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 599 DEEDNTH-ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 599 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
....... ......||+.|+|||++.+..++.++|||||||++|||+| |+.||........... ...+.
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-------~~~~~--- 236 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-------LEKGE--- 236 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH-------HHTTC---
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHH-------HHcCC---
Confidence 6543322 2233557889999999999999999999999999999999 9999976543322111 11111
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
....+......+.+++.+||+.+|.+||++.|+++.|+....
T Consensus 237 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 237 ------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 111122234568889999999999999999999999987543
No 52
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-40 Score=362.71 Aligned_cols=265 Identities=28% Similarity=0.465 Sum_probs=212.4
Q ss_pred HHHHhcCcceeeeecccCcEEEEeeeec------CCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEe
Q 040908 441 IKAATNHFDVANKIGEGGFGPVYKGLLA------DGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIE 513 (790)
Q Consensus 441 ~~~~~~~y~~~~~LG~G~fG~Vy~g~~~------~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 513 (790)
+....++|++.+.||+|+||.||+|... +++.||||++.... ....+.|.+|+.++++++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445688999999999999999999964 34789999997643 3345679999999999999999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhcCCccc--------------------cCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEec
Q 040908 514 GNQLLLIYEYLENNSLARALFGPEEH--------------------RLKLDWPTRHNICIGIARGLAYLHEESRLKIVHR 573 (790)
Q Consensus 514 ~~~~~lV~Ey~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHr 573 (790)
.+..++||||+++|+|.+++...... ...+++..++.++.||++||+|||+.+ |+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecC
Confidence 99999999999999999999542211 256899999999999999999999985 9999
Q ss_pred cCCCCcEEecCCCCeEEeecCCccccCCCCc-ceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCc
Q 040908 574 DIKATNVLLDKDLNPKISDFGLAKLDEEDNT-HISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIM 651 (790)
Q Consensus 574 Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~ 651 (790)
||||+|||++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||.
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 9999999999999999999999986543221 22234568999999999999999999999999999999999 999997
Q ss_pred cccccchhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 652 CKTKEEKFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 652 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
.....+.. . ....+.... .+......+.+++..||+.||.+||++.++++.|+....
T Consensus 279 ~~~~~~~~------~-~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 279 GMAHEEVI------Y-YVRDGNILA---------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp TSCHHHHH------H-HHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CCChHHHH------H-HHhCCCcCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 54322211 1 111121111 111233468889999999999999999999999998654
No 53
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=356.85 Aligned_cols=251 Identities=23% Similarity=0.310 Sum_probs=204.2
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchh------cHHHHHHHHHHhhccCCCceeeeeeEEEeCCeE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQ------GNREFVNEIGTISALQHPHLVKLYGCCIEGNQL 517 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 517 (790)
.++|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++...+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 467999999999999999999964 6899999998654321 356799999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCC----CeEEeec
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL----NPKISDF 593 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~----~~kl~DF 593 (790)
++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+||
T Consensus 90 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 999999999999999942 346899999999999999999999985 99999999999999887 8999999
Q ss_pred CCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCC
Q 040908 594 GLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGN 673 (790)
Q Consensus 594 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 673 (790)
|+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+... ........
T Consensus 163 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-----~~~~~~~~ 235 (326)
T 2y0a_A 163 GLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA-----NVSAVNYE 235 (326)
T ss_dssp TTCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH-----HHHHTCCC
T ss_pred CCCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH-----HHHhcCCC
Confidence 99987654322 234579999999999998999999999999999999999999997543322111 00000000
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 674 LMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 674 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
... .........+.+++..||+.||.+|||+.|+++
T Consensus 236 ~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 236 FED--------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCH--------HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cCc--------cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 000112346788999999999999999999986
No 54
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.2e-40 Score=358.29 Aligned_cols=248 Identities=26% Similarity=0.337 Sum_probs=204.5
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEcccc---chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAK---SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|++.+.||+|+||.||+|... +|+.||+|++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 368999999999999999999964 6899999999754 234456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 84 MEYANGGELFFHLS----RERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999999983 2356899999999999999999999985 9999999999999999999999999998543
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ... .+..
T Consensus 157 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~------~i~-~~~~------ 222 (337)
T 1o6l_A 157 SDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE------LIL-MEEI------ 222 (337)
T ss_dssp CTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHH-HCCC------
T ss_pred cCCC-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHH------HHH-cCCC------
Confidence 3222 2344679999999999999999999999999999999999999997543322111 111 1111
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRP-----LMSSVVS 717 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~ev~~ 717 (790)
.. +.....++.+++..|++.||.+|| ++.|+++
T Consensus 223 ~~----p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 223 RF----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CC----CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 11 112234678899999999999999 8998865
No 55
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.2e-40 Score=355.42 Aligned_cols=264 Identities=22% Similarity=0.334 Sum_probs=202.1
Q ss_pred HhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccch--hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSK--QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
..++|++.+.||+|+||.||+|...+|+.||+|++..... .....+.+|+.++++++||||+++++++.+.+..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 3478999999999999999999988899999999875432 22467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+++ +|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 99 e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 99 EFMEK-DLKKVLDE---NKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp ECCSE-EHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred cCCCC-CHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 99985 78888743 2346899999999999999999999985 99999999999999999999999999987653
Q ss_pred CCcceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhh--CCccc--
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQ--GNLME-- 676 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--~~~~~-- 676 (790)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+ ....... .....
T Consensus 172 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 172 PVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI--FSILGTPNPREWPQVQ 248 (311)
T ss_dssp CCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHH--HHHHCCCCTTTSGGGT
T ss_pred Ccc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHH--HHHHCCCChHHhhhhh
Confidence 322 2234568999999999876 56899999999999999999999999765443322111 1100000 00000
Q ss_pred ----ccCCCC--CCCCc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 677 ----LVDPNL--GSNVD-----KEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 677 ----~~d~~l--~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..+... ..... .....++.+++..|++.||.+|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000000 00000 112346789999999999999999999876
No 56
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.4e-40 Score=350.67 Aligned_cols=257 Identities=25% Similarity=0.392 Sum_probs=196.0
Q ss_pred HhcCcceeeeecccCcEEEEeeeecC----CcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLAD----GTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLL 518 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~~----g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 518 (790)
..++|++.+.||+|+||.||+|.... +..||+|++.... ....+.+.+|+.++++++||||+++++++. .+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 35689999999999999999998642 4579999987543 334567899999999999999999999984 56789
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccc
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 598 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~ 598 (790)
+||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 92 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEECCTTEEHHHHHHH---TTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccc
Confidence 99999999999999942 2346899999999999999999999985 99999999999999999999999999987
Q ss_pred cCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 599 DEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 599 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
.............+|+.|+|||++....++.++|||||||++|||++ |+.||......+.. . .. ..+..
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~---~---~i-~~~~~--- 235 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI---G---RI-ENGER--- 235 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH---H---HH-HTTCC---
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHH---H---HH-HcCCC---
Confidence 65443333334557889999999999999999999999999999997 99999755433211 1 11 11111
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
... +......+.+++..|++.||.+||++.|+++.|+...
T Consensus 236 --~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 236 --LPM----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp --CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 011 1223456788999999999999999999999998653
No 57
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=366.65 Aligned_cols=262 Identities=27% Similarity=0.399 Sum_probs=211.4
Q ss_pred HhcCcceeeeecccCcEEEEeeeec--------CCcEEEEEEccccc-hhcHHHHHHHHHHhhcc-CCCceeeeeeEEEe
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA--------DGTLIAVKQLSAKS-KQGNREFVNEIGTISAL-QHPHLVKLYGCCIE 513 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~--------~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 513 (790)
..++|.+.+.||+|+||.||+|... .+..||||++.... ......+.+|+++++++ +||||++++++|..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 3578999999999999999999842 24679999997643 33456789999999999 99999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhcCCcc------------ccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEE
Q 040908 514 GNQLLLIYEYLENNSLARALFGPEE------------HRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVL 581 (790)
Q Consensus 514 ~~~~~lV~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NIL 581 (790)
.+..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||+.+ |+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEE
Confidence 9999999999999999999953321 1245899999999999999999999985 999999999999
Q ss_pred ecCCCCeEEeecCCccccCCCCc-ceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchh
Q 040908 582 LDKDLNPKISDFGLAKLDEEDNT-HISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKF 659 (790)
Q Consensus 582 l~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~ 659 (790)
++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+.
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~- 302 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL- 302 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-
Confidence 99999999999999986654332 22234567889999999999999999999999999999999 9999975432221
Q ss_pred hHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 660 YLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 660 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
.... ..+.. .. .+.....++.+++..||+.||.+||++.||++.|+....
T Consensus 303 -----~~~~-~~~~~-----~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 303 -----FKLL-KEGHR-----MD----KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp -----HHHH-HTTCC-----CC----CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----HHHH-HcCCC-----CC----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111 11111 11 111233568889999999999999999999999988764
No 58
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-40 Score=356.84 Aligned_cols=251 Identities=18% Similarity=0.253 Sum_probs=205.1
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEY 523 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 523 (790)
.++|++.+.||+|+||.||+|... +++.||+|.+... ......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 578999999999999999999964 6889999998653 23345688999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC--CCCeEEeecCCccccCC
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK--DLNPKISDFGLAKLDEE 601 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~--~~~~kl~DFGla~~~~~ 601 (790)
+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++....
T Consensus 83 ~~g~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 83 ISGLDIFERINT---SAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 999999999943 2346899999999999999999999985 999999999999987 78999999999987654
Q ss_pred CCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPN 681 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 681 (790)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ..... +... .++.
T Consensus 157 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~------~~i~~-~~~~--~~~~ 225 (321)
T 1tki_A 157 GDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII------ENIMN-AEYT--FDEE 225 (321)
T ss_dssp TCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH------HHHHH-TCCC--CCHH
T ss_pred CCc--cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHH------HHHHc-CCCC--CChh
Confidence 432 24466999999999999888899999999999999999999999765432211 11111 1100 0000
Q ss_pred CCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 682 LGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 682 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
. ......++.+++..|++.||.+|||+.|+++
T Consensus 226 ~----~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 226 A----FKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp H----HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred h----hccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 0012356789999999999999999999987
No 59
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.1e-40 Score=361.61 Aligned_cols=273 Identities=28% Similarity=0.390 Sum_probs=211.9
Q ss_pred hcCcceeeeecccCcEEEEeeee-----cCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEE--eCCeE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-----ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCI--EGNQL 517 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-----~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~--~~~~~ 517 (790)
.++|++.+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++. +.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 36899999999999999999983 467899999998766666678999999999999999999999987 45678
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
++||||+++++|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 102 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEEECCTTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred EEEEeecCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccce
Confidence 999999999999999942 2346899999999999999999999985 9999999999999999999999999998
Q ss_pred ccCCCCcc--eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcc
Q 040908 598 LDEEDNTH--ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLM 675 (790)
Q Consensus 598 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 675 (790)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...+.........+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~ 254 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLR-MMGCERDVPALSRLL 254 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH-HCC----CCHHHHHH
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhh-hcccccccccHHHHH
Confidence 76544332 223356888999999999988999999999999999999999998643221100 000000000000001
Q ss_pred cccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 676 ELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 676 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
+.+........+......+.+++..||+.||.+|||+.|+++.|+....
T Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 255 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred HHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111111112223344578899999999999999999999999998654
No 60
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.6e-40 Score=372.57 Aligned_cols=252 Identities=27% Similarity=0.402 Sum_probs=205.8
Q ss_pred HhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCC-eEEEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGN-QLLLIYE 522 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~E 522 (790)
..++|++.+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 3567899999999999999999985 7899999997543 4578999999999999999999999988765 7999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCC
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 602 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 602 (790)
|+++|+|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp CCTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 99999999999532 2234799999999999999999999985 999999999999999999999999999854322
Q ss_pred CcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccccCCC
Q 040908 603 NTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPN 681 (790)
Q Consensus 603 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 681 (790)
. ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||......+... . ...+.
T Consensus 343 ~----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~------~-i~~~~-------- 403 (450)
T 1k9a_A 343 Q----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP------R-VEKGY-------- 403 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHH------H-HHTTC--------
T ss_pred c----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH------H-HHcCC--------
Confidence 1 22357889999999999999999999999999999999 999997544332111 1 11111
Q ss_pred CCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 682 LGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 682 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
....+......+.+++..||+.||.+|||+.++++.|+.+.
T Consensus 404 -~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 404 -KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 11112233457888999999999999999999999998754
No 61
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=9.6e-41 Score=368.07 Aligned_cols=261 Identities=26% Similarity=0.386 Sum_probs=207.8
Q ss_pred hcCcceeeeecccCcEEEEeeeec------CCcEEEEEEcccc-chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA------DGTLIAVKQLSAK-SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQL 517 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~------~g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 517 (790)
.++|++.+.||+|+||.||+|.+. +++.||||++... .......+.+|+.++++++||||+++++++...+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467999999999999999999843 4678999999654 334456789999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhcCCc---cccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCC---CeEEe
Q 040908 518 LLIYEYLENNSLARALFGPE---EHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL---NPKIS 591 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~---~~kl~ 591 (790)
++||||+++|+|.+++.... .....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999995322 12245899999999999999999999985 99999999999999554 59999
Q ss_pred ecCCccccCCCC-cceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHH
Q 040908 592 DFGLAKLDEEDN-THISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLK 669 (790)
Q Consensus 592 DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~ 669 (790)
|||+++...... ........||+.|+|||++.+..++.++|||||||++|||+| |+.||......+.. . ..
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~---~---~i- 299 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL---E---FV- 299 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH---H---HH-
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH---H---HH-
Confidence 999997542211 122234568999999999999999999999999999999998 99999754332211 1 11
Q ss_pred hhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 670 EQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 670 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
..+.. ...+......+.+++..||+.||.+||++.||++.|+....
T Consensus 300 ~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 300 TSGGR---------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp HTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCC---------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 11111 01111233467889999999999999999999999987543
No 62
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=8.2e-40 Score=362.56 Aligned_cols=252 Identities=23% Similarity=0.331 Sum_probs=206.5
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEY 523 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 523 (790)
.++|++.+.||+|+||.||+|... +|+.||+|++..........+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 468999999999999999999864 6889999999766555566789999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC--CCCeEEeecCCccccCC
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK--DLNPKISDFGLAKLDEE 601 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~--~~~~kl~DFGla~~~~~ 601 (790)
+++|+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++....
T Consensus 130 ~~gg~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 130 LSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 999999999943 2346899999999999999999999985 999999999999974 47799999999987654
Q ss_pred CCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPN 681 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 681 (790)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. . ... .... ..++.
T Consensus 204 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~---~---~i~-~~~~--~~~~~ 272 (387)
T 1kob_A 204 DEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL---Q---NVK-RCDW--EFDED 272 (387)
T ss_dssp TSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH---H---HHH-HCCC--CCCSS
T ss_pred Ccc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHH---H---HHH-hCCC--CCCcc
Confidence 332 23456999999999999989999999999999999999999999754322211 1 111 1111 01111
Q ss_pred CCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 682 LGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 682 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
... ....++.+++..||+.||.+|||+.|+++
T Consensus 273 ~~~----~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 273 AFS----SVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp TTT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccc----cCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 111 22346789999999999999999999976
No 63
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.3e-40 Score=356.87 Aligned_cols=267 Identities=24% Similarity=0.419 Sum_probs=197.1
Q ss_pred HHHHhcCcceeeeecccCcEEEEeeeecCC-c---EEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEeC
Q 040908 441 IKAATNHFDVANKIGEGGFGPVYKGLLADG-T---LIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIEG 514 (790)
Q Consensus 441 ~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~g-~---~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 514 (790)
+....++|++.+.||+|+||.||+|..... . .||||++... .....+.+.+|+.++++++||||+++++++...
T Consensus 18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 334567899999999999999999986543 2 7999999764 334467899999999999999999999999877
Q ss_pred CeE------EEEEEeccCCChhhhhcCCc--cccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCC
Q 040908 515 NQL------LLIYEYLENNSLARALFGPE--EHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL 586 (790)
Q Consensus 515 ~~~------~lV~Ey~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~ 586 (790)
+.. ++||||+++|+|.+++.... .....+++..+..++.|++.||+|||+.+ |+||||||+|||+++++
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDM 174 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTS
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCC
Confidence 655 99999999999999984322 12236899999999999999999999985 99999999999999999
Q ss_pred CeEEeecCCccccCCCCc-ceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHH
Q 040908 587 NPKISDFGLAKLDEEDNT-HISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDW 664 (790)
Q Consensus 587 ~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~ 664 (790)
.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......+...
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~---- 250 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYN---- 250 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH----
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHH----
Confidence 999999999986544322 12233457889999999999999999999999999999999 899997654332211
Q ss_pred HHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCCC
Q 040908 665 ALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVGVP 726 (790)
Q Consensus 665 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~~~ 726 (790)
.... +.. ...+......+.+++..||+.||.+|||+.++++.|++....+
T Consensus 251 --~~~~-~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 251 --YLIG-GNR---------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp --HHHT-TCC---------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred --HHhc-CCC---------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1111 110 0111223356889999999999999999999999999876543
No 64
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.3e-40 Score=347.49 Aligned_cols=256 Identities=26% Similarity=0.456 Sum_probs=209.7
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEec
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYL 524 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 524 (790)
.++|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 46799999999999999999998888999999997643 23467899999999999999999999999999999999999
Q ss_pred cCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCCc
Q 040908 525 ENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 604 (790)
Q Consensus 525 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 604 (790)
++++|.+++.. ....+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 86 ~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 86 EHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp TTCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCcHHHHHhh---CcccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 99999999942 2346899999999999999999999985 99999999999999999999999999986543222
Q ss_pred ceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccccCCCCC
Q 040908 605 HISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLG 683 (790)
Q Consensus 605 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 683 (790)
.......+|..|+|||++.+..++.++||||||+++|||++ |+.||......+.. ..... +. ....
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~------~~i~~-~~-----~~~~- 226 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------EDIST-GF-----RLYK- 226 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH------HHHHT-TC-----CCCC-
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHH------HHHhc-CC-----cCCC-
Confidence 22233457889999999999999999999999999999999 89998754322111 11111 10 0011
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 684 SNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 684 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
+......+.+++.+||+.+|.+||++.|+++.|+...
T Consensus 227 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 227 ---PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp ---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1112346788999999999999999999999998753
No 65
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.6e-40 Score=354.61 Aligned_cols=261 Identities=30% Similarity=0.453 Sum_probs=210.7
Q ss_pred HhcCcceeeeecccCcEEEEeeee------cCCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCe
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL------ADGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQ 516 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~------~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 516 (790)
..++|.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 357899999999999999999985 245789999997543 3345678999999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhcCCcc--------------------ccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCC
Q 040908 517 LLLIYEYLENNSLARALFGPEE--------------------HRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIK 576 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk 576 (790)
.++||||+++|+|.+++..... ....+++..++.++.||++||+|||+.+ |+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccc
Confidence 9999999999999999953321 1234889999999999999999999985 9999999
Q ss_pred CCcEEecCCCCeEEeecCCccccCCCCcc-eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCcccc
Q 040908 577 ATNVLLDKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKT 654 (790)
Q Consensus 577 ~~NILl~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~ 654 (790)
|+|||++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999866543322 2233457889999999999899999999999999999999 999997654
Q ss_pred ccchhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 655 KEEKFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 655 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
....... ...+.. + ..+......+.+++..||+.||.+||++.|+++.|+...
T Consensus 258 ~~~~~~~-------~~~~~~-----~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 258 PERLFNL-------LKTGHR-----M----ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp GGGHHHH-------HHTTCC-----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHH-------hhcCCc-----C----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 3322111 111111 1 111223456889999999999999999999999998754
No 66
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=5.9e-40 Score=352.72 Aligned_cols=260 Identities=27% Similarity=0.459 Sum_probs=201.8
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
.++|.+.+.||+|+||.||+|.... .+|+|+++.. .....+.|.+|+.++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 4689999999999999999998753 5889988653 3334567999999999999999999999875 455889999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCC
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 602 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 602 (790)
|+++++|.+++... ...+++.++..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred cCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 99999999999532 356899999999999999999999985 999999999999999999999999999865432
Q ss_pred -CcceeeccccCCCcccHHHhh---cCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccccc
Q 040908 603 -NTHISTRVAGTFGYMAPEYAM---RGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELV 678 (790)
Q Consensus 603 -~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 678 (790)
.........||+.|+|||++. ...++.++|||||||++|||++|+.||......+... .....+..
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~------~~~~~~~~---- 255 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII------FMVGRGYA---- 255 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH------HHHHHTCC----
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHH------HHHhcCCC----
Confidence 222233457999999999987 5678889999999999999999999997544322211 11111111
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 679 DPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 679 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
.+.+. .........+.+++..||+.+|.+||++.|+++.|+....
T Consensus 256 ~~~~~-~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 256 SPDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CCCST-TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred Ccchh-hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 11111 1111233568899999999999999999999999987543
No 67
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.6e-40 Score=361.26 Aligned_cols=255 Identities=22% Similarity=0.353 Sum_probs=204.3
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc-----hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS-----KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLL 518 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 518 (790)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46799999999999999999985 468999999986432 123567999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCC---eEEeecCC
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKISDFGL 595 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~DFGl 595 (790)
+||||+++|+|.+++.........+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999888543333456899999999999999999999985 999999999999987654 99999999
Q ss_pred ccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcc
Q 040908 596 AKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLM 675 (790)
Q Consensus 596 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 675 (790)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +. ... ..+...
T Consensus 180 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~--~~i--~~~~~~ 250 (351)
T 3c0i_A 180 AIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER----LF--EGI--IKGKYK 250 (351)
T ss_dssp CEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH----HH--HHH--HHTCCC
T ss_pred eeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH----HH--HHH--HcCCCC
Confidence 987654332 233467999999999999989999999999999999999999999753211 11 111 111110
Q ss_pred cccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 676 ELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 676 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.++.... .....+.+++..||+.||.+|||+.|+++
T Consensus 251 --~~~~~~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 --MNPRQWS----HISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp --CCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --CCccccc----cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000000 12356789999999999999999999986
No 68
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.8e-40 Score=368.60 Aligned_cols=259 Identities=19% Similarity=0.306 Sum_probs=208.6
Q ss_pred HHHHHHHhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEe
Q 040908 438 LRQIKAATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIE 513 (790)
Q Consensus 438 ~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 513 (790)
+++++...++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.++|||||+++++|.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 4455566789999999999999999999965 58899999986532 2223458899999999999999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeec
Q 040908 514 GNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDF 593 (790)
Q Consensus 514 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DF 593 (790)
.+..++||||+++|+|.+++. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~-----~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMS-----NYDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEecc
Confidence 999999999999999999983 235899999999999999999999985 999999999999999999999999
Q ss_pred CCccccCCCCcceeeccccCCCcccHHHhhcCC----CCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHH
Q 040908 594 GLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGH----LTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLK 669 (790)
Q Consensus 594 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~ 669 (790)
|+++.............+||+.|+|||++.... ++.++|||||||++|||++|+.||......+....+ ..
T Consensus 213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i-----~~ 287 (410)
T 3v8s_A 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI-----MN 287 (410)
T ss_dssp TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH-----HT
T ss_pred ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHH-----Hh
Confidence 999876654443444678999999999998765 788999999999999999999999765433221111 00
Q ss_pred hhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 040908 670 EQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTN--RPLMSSVVS 717 (790)
Q Consensus 670 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~ev~~ 717 (790)
.... ..-+. ... ...++.+++..|++.+|.+ ||++.||++
T Consensus 288 ~~~~---~~~p~-~~~----~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 288 HKNS---LTFPD-DND----ISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HHHH---CCCCT-TCC----CCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred cccc---ccCCC-ccc----ccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 0000 00010 011 2346788899999999988 999999986
No 69
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.5e-40 Score=353.09 Aligned_cols=261 Identities=23% Similarity=0.403 Sum_probs=215.1
Q ss_pred HHHHhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEE
Q 040908 441 IKAATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 441 ~~~~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
.+...++|++.+.||+|+||.||+|... ++..||+|++... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 3345678999999999999999999965 4889999998753 3345778999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
||||+++++|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 87 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EEECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEEcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 99999999999999432 2356899999999999999999999985 999999999999999999999999999877
Q ss_pred CCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCccccc
Q 040908 600 EEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELV 678 (790)
Q Consensus 600 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 678 (790)
............+|+.|+|||++.+..++.++||||||+++|||++ |+.||.......... .... . .
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~------~~~~-~-----~ 229 (288)
T 3kfa_A 162 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE------LLEK-D-----Y 229 (288)
T ss_dssp CSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH------HHHT-T-----C
T ss_pred cCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH------HHhc-c-----C
Confidence 6554444445567889999999999999999999999999999999 999987544322111 1111 1 0
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 679 DPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 679 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
. ...+......+.+++..|++.||.+||++.|+++.|+...
T Consensus 230 ~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 230 R----MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp C----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C----CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 1 1111223356889999999999999999999999998653
No 70
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.9e-40 Score=363.79 Aligned_cols=268 Identities=19% Similarity=0.250 Sum_probs=205.7
Q ss_pred HhcCcceeeeecccCcEEEEeeeecC------CcEEEEEEccccchhc-----------HHHHHHHHHHhhccCCCceee
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLAD------GTLIAVKQLSAKSKQG-----------NREFVNEIGTISALQHPHLVK 506 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~~------g~~vAvK~~~~~~~~~-----------~~~~~~E~~~l~~l~H~niv~ 506 (790)
..++|++.+.||+|+||.||+|.+.. ++.||||++....... ...+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 45689999999999999999998654 4789999986543211 123445667778889999999
Q ss_pred eeeEEEeC----CeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe
Q 040908 507 LYGCCIEG----NQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL 582 (790)
Q Consensus 507 l~g~~~~~----~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl 582 (790)
+++++... ...++||||+ +++|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEE
Confidence 99999865 4589999999 9999999942 3357999999999999999999999985 9999999999999
Q ss_pred c--CCCCeEEeecCCccccCCCCcc------eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCcccc
Q 040908 583 D--KDLNPKISDFGLAKLDEEDNTH------ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKT 654 (790)
Q Consensus 583 ~--~~~~~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~ 654 (790)
+ .++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 9 8899999999999865432211 1123559999999999999999999999999999999999999998543
Q ss_pred ccchhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 655 KEEKFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 655 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
..... ..+.... ....+.+++++.+... ....++.+++..||+.+|.+||++.+|++.|+....
T Consensus 266 ~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~ 329 (364)
T 3op5_A 266 KDPKY--VRDSKIR-YRENIASLMDKCFPAA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK 329 (364)
T ss_dssp TCHHH--HHHHHHH-HHHCHHHHHHHHSCTT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred cCHHH--HHHHHHH-hhhhHHHHHHHhcccc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 32221 1111111 1122333333332211 123467889999999999999999999999987654
No 71
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.1e-40 Score=349.25 Aligned_cols=257 Identities=32% Similarity=0.497 Sum_probs=209.7
Q ss_pred HhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEe
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEY 523 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 523 (790)
..++|++.+.||+|+||.||+|...++..||+|++.... ...+.+.+|++++++++||||+++++++.. +..++||||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 457899999999999999999998888899999986543 345779999999999999999999999864 568999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCC
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 603 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~ 603 (790)
+++++|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 89 ~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T 1qpc_A 89 MENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (279)
T ss_dssp CTTCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred CCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence 9999999999532 2236899999999999999999999985 9999999999999999999999999998765544
Q ss_pred cceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccccCCCC
Q 040908 604 THISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNL 682 (790)
Q Consensus 604 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 682 (790)
........+|..|+|||++.+..++.++||||||+++|||++ |+.||......+. . ... ..+. ....
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---~---~~~-~~~~-----~~~~ 231 (279)
T 1qpc_A 164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---I---QNL-ERGY-----RMVR 231 (279)
T ss_dssp EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH---H---HHH-HTTC-----CCCC
T ss_pred cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHH---H---HHH-hccc-----CCCC
Confidence 333334557889999999998899999999999999999999 8999865432211 1 111 1110 0111
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 683 GSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 683 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
+......+.+++..|++.+|.+|||+.++++.|+...
T Consensus 232 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 232 ----PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 1122356888999999999999999999999998754
No 72
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.2e-40 Score=356.54 Aligned_cols=267 Identities=27% Similarity=0.372 Sum_probs=205.8
Q ss_pred cceeeeecccCcEEEEeeee-----cCCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEe--CCeEEE
Q 040908 448 FDVANKIGEGGFGPVYKGLL-----ADGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIE--GNQLLL 519 (790)
Q Consensus 448 y~~~~~LG~G~fG~Vy~g~~-----~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~l 519 (790)
|++.+.||+|+||.||++.+ .+++.||||++.... ....+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48999999999999988764 267899999997653 3345679999999999999999999999987 467899
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
||||+++|+|.+++.. ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 113 v~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccccc
Confidence 9999999999999932 35899999999999999999999985 999999999999999999999999999876
Q ss_pred CCCCcc--eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 600 EEDNTH--ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 600 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
...... ......||..|+|||++.+..++.++||||||+++|||+||+.||........ ....+.........+.+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL-ELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH-HHHCSCCHHHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh-hhhcccccchhHHHHHHH
Confidence 554322 22345688899999999998999999999999999999999999864321100 000000000000011111
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
++.......+......+.+++.+||+.||.+|||+.|+++.|+...
T Consensus 264 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 264 LERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 1111112222233457889999999999999999999999998653
No 73
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-40 Score=359.86 Aligned_cols=264 Identities=26% Similarity=0.390 Sum_probs=209.6
Q ss_pred HHhcCcceeeeecccCcEEEEeeee------cCCcEEEEEEccccc-hhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeC
Q 040908 443 AATNHFDVANKIGEGGFGPVYKGLL------ADGTLIAVKQLSAKS-KQGNREFVNEIGTISAL-QHPHLVKLYGCCIEG 514 (790)
Q Consensus 443 ~~~~~y~~~~~LG~G~fG~Vy~g~~------~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 514 (790)
...++|++.+.||+|+||.||+|.. .++..||||++.... ....+.+.+|+.++.++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3457899999999999999999985 245689999997542 33456789999999999 899999999999999
Q ss_pred CeEEEEEEeccCCChhhhhcCCccc-------------------cCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccC
Q 040908 515 NQLLLIYEYLENNSLARALFGPEEH-------------------RLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDI 575 (790)
Q Consensus 515 ~~~~lV~Ey~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDl 575 (790)
+..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||+.+ |+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCC
Confidence 9999999999999999999643211 134899999999999999999999985 999999
Q ss_pred CCCcEEecCCCCeEEeecCCccccCCCCcc-eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccc
Q 040908 576 KATNVLLDKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCK 653 (790)
Q Consensus 576 k~~NILl~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~ 653 (790)
||+|||++.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999866443332 2334567889999999999999999999999999999998 99999765
Q ss_pred cccchhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 654 TKEEKFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 654 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
...... . .....+. .. ..+......+.+++..||+.||.+||++.|+++.|+....
T Consensus 279 ~~~~~~--~----~~~~~~~-----~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 279 PVDANF--Y----KLIQNGF-----KM----DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp CCSHHH--H----HHHHTTC-----CC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CcHHHH--H----HHHhcCC-----CC----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 432211 1 1111111 11 1111224568889999999999999999999999987654
No 74
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.2e-40 Score=359.83 Aligned_cols=249 Identities=22% Similarity=0.360 Sum_probs=199.3
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEcccc---chhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAK---SKQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLL 518 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 518 (790)
..++|++.+.||+|+||.||+|... +|+.||||++... .......+.+|..++..+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3478999999999999999999964 6899999999754 233456688999999988 7999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccc
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 598 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~ 598 (790)
+||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++.
T Consensus 101 lv~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQ----KSRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceee
Confidence 9999999999999993 2356999999999999999999999985 99999999999999999999999999985
Q ss_pred cCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccccc
Q 040908 599 DEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELV 678 (790)
Q Consensus 599 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 678 (790)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .. . .+..
T Consensus 174 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~-----~i-~-~~~~---- 241 (353)
T 3txo_A 174 GICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFE-----AI-L-NDEV---- 241 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-----HH-H-HCCC----
T ss_pred cccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHH-----HH-H-cCCC----
Confidence 43322 22345679999999999999899999999999999999999999997654332111 11 1 1111
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 040908 679 DPNLGSNVDKEQVRVMINVALLCADVSPTNRPLM------SSVVS 717 (790)
Q Consensus 679 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~------~ev~~ 717 (790)
.++......+.+++..|++.||.+||++ .|+++
T Consensus 242 ------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 ------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1111223457889999999999999998 66654
No 75
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.7e-40 Score=355.27 Aligned_cols=261 Identities=26% Similarity=0.390 Sum_probs=205.7
Q ss_pred cCcceeeeecccCcEEEEeeee-----cCCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeC--CeE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLL-----ADGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEG--NQL 517 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~-----~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 517 (790)
+.|++.+.||+|+||.||+|.+ .+++.||+|++.... ......+.+|+.++++++||||+++++++... +..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 5688999999999999999983 468899999997543 33457789999999999999999999999876 668
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
++||||+++|+|.+++. .....+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 101 ~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLP---KNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHH---HHTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHH---hccccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECcccccc
Confidence 99999999999999993 23356899999999999999999999985 9999999999999999999999999998
Q ss_pred ccCCCCcc--eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCcccccc---------chhhHHHHHH
Q 040908 598 LDEEDNTH--ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKE---------EKFYLLDWAL 666 (790)
Q Consensus 598 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~---------~~~~l~~~~~ 666 (790)
........ ......||..|+|||++.+..++.++||||||+++|||+||+.|+...... ..........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 76554332 223456888999999999999999999999999999999999886432110 0001111111
Q ss_pred HHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040908 667 LLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGR 722 (790)
Q Consensus 667 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~ 722 (790)
.. ..+ .....+......+.+++..||+.||.+|||+.|+++.|+..
T Consensus 255 ~~-~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 255 TL-KEG---------KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HH-HTT---------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HH-hcc---------CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 11 111 11112223345788999999999999999999999999864
No 76
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-40 Score=368.46 Aligned_cols=263 Identities=21% Similarity=0.276 Sum_probs=208.9
Q ss_pred ccHHHHHHHhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEE
Q 040908 436 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCC 511 (790)
Q Consensus 436 ~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~ 511 (790)
+.+++++...++|++.+.||+|+||.||+|... +|+.||+|++.+.. ......+.+|..++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345566667889999999999999999999964 68999999996532 22234588999999999999999999999
Q ss_pred EeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEe
Q 040908 512 IEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKIS 591 (790)
Q Consensus 512 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 591 (790)
.+.+..++||||+++|+|.+++. .....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~---~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLS---KFGERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHH---HHSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEEC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEe
Confidence 99999999999999999999994 22346899999999999999999999985 9999999999999999999999
Q ss_pred ecCCccccCCCCcceeeccccCCCcccHHHhh-------cCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHH
Q 040908 592 DFGLAKLDEEDNTHISTRVAGTFGYMAPEYAM-------RGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDW 664 (790)
Q Consensus 592 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~ 664 (790)
|||+++.............+||+.|+|||++. ...++.++|||||||++|||++|+.||......+....+
T Consensus 205 DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i-- 282 (412)
T 2vd5_A 205 DFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI-- 282 (412)
T ss_dssp CCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH--
T ss_pred echhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHH--
Confidence 99999876554443334568999999999997 356899999999999999999999999765433221111
Q ss_pred HHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCC---CCHHHHHH
Q 040908 665 ALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNR---PLMSSVVS 717 (790)
Q Consensus 665 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Pt~~ev~~ 717 (790)
......-. .+..... ...++.+++.+|++ +|.+| |++.|+++
T Consensus 283 -~~~~~~~~-----~p~~~~~----~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 283 -VHYKEHLS-----LPLVDEG----VPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp -HTHHHHCC-----CC----C----CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred -HhcccCcC-----CCccccC----CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 00000011 1111111 23467889999999 99998 58888875
No 77
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.4e-39 Score=357.93 Aligned_cols=253 Identities=22% Similarity=0.332 Sum_probs=204.7
Q ss_pred HHhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEE
Q 040908 443 AATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 443 ~~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
...++|++.+.||+|+||.||+|... +|+.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34578999999999999999999864 6899999998654 23345678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCC---CCeEEeecCCc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKD---LNPKISDFGLA 596 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~---~~~kl~DFGla 596 (790)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||++
T Consensus 106 v~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EECCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 9999999999999843 246899999999999999999999985 9999999999999865 45999999999
Q ss_pred cccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 597 KLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 597 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
+....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .. .. ..+...
T Consensus 179 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---~~---~i-~~~~~~- 248 (362)
T 2bdw_A 179 IEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL---YA---QI-KAGAYD- 248 (362)
T ss_dssp BCCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HH---HH-HHTCCC-
T ss_pred eEecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH---HH---HH-HhCCCC-
Confidence 86654322 2346799999999999998999999999999999999999999975432211 11 11 111110
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
. ..........++.+++..||+.||.+||++.|+++
T Consensus 249 ~-----~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 249 Y-----PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp C-----CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred C-----CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0 00001122356788999999999999999999976
No 78
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.6e-40 Score=349.95 Aligned_cols=249 Identities=24% Similarity=0.365 Sum_probs=195.7
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccch--------------------------hcHHHHHHHHHHhh
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSK--------------------------QGNREFVNEIGTIS 497 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~--------------------------~~~~~~~~E~~~l~ 497 (790)
.++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 36899999999999999999985 4688999999865321 11246889999999
Q ss_pred ccCCCceeeeeeEEEe--CCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccC
Q 040908 498 ALQHPHLVKLYGCCIE--GNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDI 575 (790)
Q Consensus 498 ~l~H~niv~l~g~~~~--~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDl 575 (790)
+++||||+++++++.+ .+..++||||+++++|.+++. ...+++..+..++.||++||+|||+.+ |+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCC
Confidence 9999999999999986 568999999999999988762 246899999999999999999999985 999999
Q ss_pred CCCcEEecCCCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcCC---CCChhhHHHHHHHHHHHHhCCCCCcc
Q 040908 576 KATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGH---LTDKADVYSFGIVALEIVSGRSNIMC 652 (790)
Q Consensus 576 k~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~ksDV~S~Gvvl~elltG~~p~~~ 652 (790)
||+|||++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999987654332 234467999999999987654 36789999999999999999999975
Q ss_pred ccccchhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 653 KTKEEKFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 653 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..... +..... ..... . + .... ....+.+++.+||+.||.+||++.|+++
T Consensus 243 ~~~~~------~~~~~~-~~~~~-~--~-~~~~----~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 243 ERIMC------LHSKIK-SQALE-F--P-DQPD----IAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SSHHH------HHHHHH-HCCCC-C--C-SSSC----CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccHHH------HHHHHh-cccCC-C--C-Cccc----cCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 43211 111111 11110 0 0 0111 2346788999999999999999999864
No 79
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3.8e-40 Score=381.06 Aligned_cols=261 Identities=29% Similarity=0.457 Sum_probs=212.4
Q ss_pred HHHHhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 441 IKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 441 ~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
++...++|++.+.||+|+||.||+|.+.++..||||+++... ...++|.+|+.+|++++||||+++++++.+ +..++|
T Consensus 262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv 339 (535)
T 2h8h_A 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339 (535)
T ss_dssp SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence 344567899999999999999999999888889999997643 345689999999999999999999999876 678999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++|+|.+++... ....+++..++.|+.||++||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 340 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp ECCCTTEEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred eehhcCCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 9999999999999432 2346899999999999999999999985 9999999999999999999999999998664
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccccC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVD 679 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 679 (790)
...........++..|+|||++....++.++|||||||++|||+| |+.||......+.. ... ..+..
T Consensus 415 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~------~~i-~~~~~----- 482 (535)
T 2h8h_A 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL------DQV-ERGYR----- 482 (535)
T ss_dssp CHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHH------HHH-HTTCC-----
T ss_pred CCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH------HHH-HcCCC-----
Confidence 322222233457889999999999999999999999999999999 99999754332211 111 11110
Q ss_pred CCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 680 PNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 680 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
...+......+.+++..||+.||.+|||+.+|+++|+....
T Consensus 483 ----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 483 ----MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 11122234568899999999999999999999999998764
No 80
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=354.42 Aligned_cols=245 Identities=26% Similarity=0.331 Sum_probs=192.9
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc--hhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS--KQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|++.++||+|+||+||+|... +|+.||||++.... ......+..|+..+.++ +||||++++++|.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 367999999999999999999965 78999999876532 23334556666666665 899999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+ +++|.+++. .....++|..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 136 ~e~~-~~~L~~~~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 136 TELC-GPSLQQHCE---AWGASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EECC-CCBHHHHHH---HHCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred Eecc-CCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 9999 679998884 23356999999999999999999999985 9999999999999999999999999998664
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
... ......||++|+|||++.+ .++.++|||||||++|||++|..|+.... .|... ..+....
T Consensus 209 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~--------~~~~~--~~~~~~~---- 271 (311)
T 3p1a_A 209 TAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE--------GWQQL--RQGYLPP---- 271 (311)
T ss_dssp --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH--------HHHHH--TTTCCCH----
T ss_pred cCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHHHH--hccCCCc----
Confidence 432 2234569999999998875 78999999999999999999977664321 11111 1111110
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.........+.+++.+|++.||.+|||+.|+++
T Consensus 272 ----~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 272 ----EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 011122356889999999999999999999876
No 81
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8.4e-40 Score=354.29 Aligned_cols=251 Identities=22% Similarity=0.362 Sum_probs=198.0
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCC-------
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGN------- 515 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------- 515 (790)
.++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||++++++|.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 467999999999999999999965 78999999987543 334567999999999999999999999986543
Q ss_pred --------------------------------------------------eEEEEEEeccCCChhhhhcCCccccCCCCh
Q 040908 516 --------------------------------------------------QLLLIYEYLENNSLARALFGPEEHRLKLDW 545 (790)
Q Consensus 516 --------------------------------------------------~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~ 545 (790)
..++||||+++|+|.+++..... ....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 37999999999999999965432 234677
Q ss_pred hhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCCc-----------ceeeccccCC
Q 040908 546 PTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT-----------HISTRVAGTF 614 (790)
Q Consensus 546 ~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~-----------~~~~~~~gt~ 614 (790)
..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 788999999999999999985 99999999999999999999999999987654321 1223456999
Q ss_pred CcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHH
Q 040908 615 GYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVM 694 (790)
Q Consensus 615 ~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l 694 (790)
.|+|||++.+..++.++|||||||++|||++|..|+... .... .. ...... ..........+
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-----~~~~---~~-~~~~~~---------~~~~~~~~~~~ 302 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-----VRII---TD-VRNLKF---------PLLFTQKYPQE 302 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-----HHHH---HH-HHTTCC---------CHHHHHHCHHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-----HHHH---HH-hhccCC---------CcccccCChhH
Confidence 999999999999999999999999999999997764311 0000 00 011111 01112334567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 040908 695 INVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 695 ~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.+++..||+.||.+||++.|+++
T Consensus 303 ~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 303 HMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHHHccCCCCcCCCHHHHhh
Confidence 89999999999999999999976
No 82
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=8.2e-40 Score=348.01 Aligned_cols=262 Identities=26% Similarity=0.378 Sum_probs=199.4
Q ss_pred cCcceeeeecccCcEEEEeeeecCCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEe
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEY 523 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 523 (790)
++|++.+.||+|+||.||+|...+|+.||+|++.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5799999999999999999998889999999986543 22346788999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCC
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 603 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~ 603 (790)
+++ +|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 986 899888432 246899999999999999999999985 9999999999999999999999999998654322
Q ss_pred cceeeccccCCCcccHHHhhcC-CCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhh--CC---ccc-
Q 040908 604 THISTRVAGTFGYMAPEYAMRG-HLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQ--GN---LME- 676 (790)
Q Consensus 604 ~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--~~---~~~- 676 (790)
. ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+... ......... .. ..+
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 231 (288)
T 1ob3_A 155 R-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM--RIFRILGTPNSKNWPNVTEL 231 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCCCCTTTSTTGGGS
T ss_pred c-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHHCCCChhhchhhhcc
Confidence 2 22335689999999999764 58999999999999999999999997544322111 111100000 00 000
Q ss_pred -ccCCCCCC-------CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 677 -LVDPNLGS-------NVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 677 -~~d~~l~~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..++.... .........+.+++.+|++.||.+|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 01111100 011123456789999999999999999999875
No 83
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.9e-40 Score=344.31 Aligned_cols=254 Identities=21% Similarity=0.355 Sum_probs=204.8
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEeC--CeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIEG--NQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV 520 (790)
.++|++.+.||+|+||.||+|... ++.||||++.... ....+.|.+|+.++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 367899999999999999999985 8899999987542 34456799999999999999999999999876 788999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ ++++||||||+|||++.++.++|+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 99999999999995432 236899999999999999999999873 359999999999999999999999999876433
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCC---hhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTD---KADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~---ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
. ....||+.|+|||++.+...+. ++|||||||++|||++|+.||......... ......+
T Consensus 165 ~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------~~~~~~~----- 227 (271)
T 3kmu_A 165 S------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG------MKVALEG----- 227 (271)
T ss_dssp C------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH------HHHHHSC-----
T ss_pred c------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH------HHHHhcC-----
Confidence 2 2245899999999998765544 899999999999999999999754322211 1111111
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
..+.... .....+.+++..||+.||.+|||+.|+++.|+...
T Consensus 228 ~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 228 LRPTIPP----GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp CCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1111222 23346888999999999999999999999998754
No 84
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.1e-39 Score=346.39 Aligned_cols=254 Identities=30% Similarity=0.541 Sum_probs=202.8
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhc-------HHHHHHHHHHhhccCCCceeeeeeEEEeCCe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQG-------NREFVNEIGTISALQHPHLVKLYGCCIEGNQ 516 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~-------~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 516 (790)
.++|++.+.||+|+||.||+|.. .+++.||+|++....... .+.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46899999999999999999996 478999999986543221 167899999999999999999999987655
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCC-----eEEe
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN-----PKIS 591 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~-----~kl~ 591 (790)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ ++|+||||||+|||++.++. +||+
T Consensus 97 -~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp -EEEEECCTTCBHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred -eEEEEecCCCCHHHHHhc---ccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 699999999999998843 2357899999999999999999999874 34999999999999988776 9999
Q ss_pred ecCCccccCCCCcceeeccccCCCcccHHHhh--cCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHH
Q 040908 592 DFGLAKLDEEDNTHISTRVAGTFGYMAPEYAM--RGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLK 669 (790)
Q Consensus 592 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~ 669 (790)
|||+++.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||......... +.....
T Consensus 172 Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~----~~~~~~ 243 (287)
T 4f0f_A 172 DFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK----FINMIR 243 (287)
T ss_dssp CCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHH----HHHHHH
T ss_pred CCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHH----HHHHHh
Confidence 9999985433 234467999999999983 456788999999999999999999999754433211 111111
Q ss_pred hhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040908 670 EQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEG 721 (790)
Q Consensus 670 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~ 721 (790)
..+ . .+.. +......+.+++..||+.||.+||++.|+++.|++
T Consensus 244 ~~~-~----~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 244 EEG-L----RPTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HSC-C----CCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ccC-C----CCCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 111 1 1111 22234568899999999999999999999999975
No 85
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=5.3e-40 Score=353.16 Aligned_cols=262 Identities=27% Similarity=0.440 Sum_probs=210.9
Q ss_pred HhcCcceeeeecccCcEEEEeeee------cCCcEEEEEEccccch-hcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCC
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL------ADGTLIAVKQLSAKSK-QGNREFVNEIGTISAL-QHPHLVKLYGCCIEGN 515 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~------~~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 515 (790)
..++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.+++++ +||||+++++++...+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 456899999999999999999974 3467899999975433 3356789999999999 9999999999999999
Q ss_pred eEEEEEEeccCCChhhhhcCCcc--------------ccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEE
Q 040908 516 QLLLIYEYLENNSLARALFGPEE--------------HRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVL 581 (790)
Q Consensus 516 ~~~lV~Ey~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NIL 581 (790)
..++||||+++|+|.+++..... ....+++..++.++.|+++||+|||+.+ |+||||||+|||
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEE
Confidence 99999999999999999953321 1235899999999999999999999985 999999999999
Q ss_pred ecCCCCeEEeecCCccccCCCCcc-eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchh
Q 040908 582 LDKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKF 659 (790)
Q Consensus 582 l~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~ 659 (790)
++.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+| |+.||.........
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 257 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence 999999999999999876554332 2234557889999999999999999999999999999999 99999754432211
Q ss_pred hHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 660 YLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 660 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
. .. ...+. .... +......+.+++.+|++.||.+||++.|+++.|+...
T Consensus 258 --~---~~-~~~~~-----~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 258 --Y---KM-IKEGF-----RMLS----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp --H---HH-HHHTC-----CCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --H---HH-hccCC-----CCCC----cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 1 11 11110 1111 1122356788999999999999999999999998754
No 86
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.8e-40 Score=358.39 Aligned_cols=250 Identities=23% Similarity=0.377 Sum_probs=196.3
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEcccc--chhcHHHHHHHHHHhhccCC--CceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAK--SKQGNREFVNEIGTISALQH--PHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV 520 (790)
.++|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|+.++.+++| +||+++++++...+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 4679999999999999999999888999999998643 23345678999999999976 9999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|| +.+++|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++...
T Consensus 88 ~e-~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLK----KKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 56889999994 2356899999999999999999999985 99999999999997 5689999999998665
Q ss_pred CCCcc-eeeccccCCCcccHHHhhc-----------CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHH
Q 040908 601 EDNTH-ISTRVAGTFGYMAPEYAMR-----------GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLL 668 (790)
Q Consensus 601 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~ 668 (790)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~~---- 230 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS----KL---- 230 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH----HH----
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH----HH----
Confidence 43322 2335679999999999875 6788999999999999999999999964322110 00
Q ss_pred HhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 669 KEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 669 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
...+++.....++......+.+++..||+.||.+|||+.|+++
T Consensus 231 ------~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 231 ------HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp ------HHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ------HHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 1111222222222222346788999999999999999999986
No 87
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-39 Score=350.58 Aligned_cols=274 Identities=25% Similarity=0.343 Sum_probs=205.4
Q ss_pred ccHHHHHHHhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhc--cCCCceeeeeeEEEe
Q 040908 436 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISA--LQHPHLVKLYGCCIE 513 (790)
Q Consensus 436 ~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~ 513 (790)
.....-....++|++.+.||+|+||.||+|... |+.||||++.... ...+..|.+++.. ++||||+++++++..
T Consensus 27 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~ 102 (337)
T 3mdy_A 27 LPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIK 102 (337)
T ss_dssp SCHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred CCcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEcc
Confidence 344444556689999999999999999999985 8999999985432 3344555555554 499999999999988
Q ss_pred C----CeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcC-----CCcEEeccCCCCcEEecC
Q 040908 514 G----NQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEES-----RLKIVHRDIKATNVLLDK 584 (790)
Q Consensus 514 ~----~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~-----~~~iiHrDlk~~NILl~~ 584 (790)
. ...++||||+++|+|.+++. ...+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.
T Consensus 103 ~~~~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~ 177 (337)
T 3mdy_A 103 GTGSWTQLYLITDYHENGSLYDYLK-----STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK 177 (337)
T ss_dssp SCGGGCEEEEEECCCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred CCCCCCceEEEEeccCCCcHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECC
Confidence 7 78999999999999999993 236899999999999999999999871 235999999999999999
Q ss_pred CCCeEEeecCCccccCCCCcce---eeccccCCCcccHHHhhcCCCCCh------hhHHHHHHHHHHHHhC---------
Q 040908 585 DLNPKISDFGLAKLDEEDNTHI---STRVAGTFGYMAPEYAMRGHLTDK------ADVYSFGIVALEIVSG--------- 646 (790)
Q Consensus 585 ~~~~kl~DFGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~k------sDV~S~Gvvl~elltG--------- 646 (790)
++.+||+|||+++......... .....||+.|+|||++.+...+.+ +|||||||++|||+||
T Consensus 178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~ 257 (337)
T 3mdy_A 178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257 (337)
T ss_dssp TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccc
Confidence 9999999999997654433221 124579999999999988766665 9999999999999999
Q ss_pred -CCCCccccccchhhHHHHHHHHHhhCCcccccCCCCCCCC-cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 647 -RSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLGSNV-DKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 647 -~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
+.||......... ...+... .... ...+...... ......++.+++..||+.||.+|||+.||++.|+....
T Consensus 258 ~~~p~~~~~~~~~~-~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 258 YQLPYHDLVPSDPS-YEDMREI-VCIK----KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp CCCTTTTTSCSSCC-HHHHHHH-HTTS----CCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccccHhhhcCCCCc-hhhhHHH-Hhhh----ccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 5555432221111 0111111 1111 1111111111 22667889999999999999999999999999987654
No 88
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=365.19 Aligned_cols=253 Identities=20% Similarity=0.318 Sum_probs=203.8
Q ss_pred HhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
..++|++.+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 467899999999999999999985 478999999986542 23456789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEec---CCCCeEEeecCCcc
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLD---KDLNPKISDFGLAK 597 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~---~~~~~kl~DFGla~ 597 (790)
|||+++|+|.+.+. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++
T Consensus 89 ~E~~~gg~L~~~i~----~~~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIV----AREYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHH----HCSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 99999999999984 2356899999999999999999999985 99999999999998 46789999999998
Q ss_pred ccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 598 LDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 598 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... . ...+.. ..
T Consensus 162 ~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~-----~--i~~~~~-~~ 232 (444)
T 3soa_A 162 EVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQ-----Q--IKAGAY-DF 232 (444)
T ss_dssp CCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-----H--HHHTCC-CC
T ss_pred EecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHH-----H--HHhCCC-CC
Confidence 6654332 2234679999999999999899999999999999999999999997544322111 1 111111 11
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..+. .......+.+++..|++.||.+|||+.|+++
T Consensus 233 ~~~~-----~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 233 PSPE-----WDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CTTT-----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred Cccc-----cccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1111 0122346788999999999999999999987
No 89
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.3e-39 Score=359.24 Aligned_cols=250 Identities=22% Similarity=0.327 Sum_probs=197.8
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 519 (790)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ......+..|..++.++ +|||||++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999965 57899999997643 22234578899999887 89999999999999999999
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 999999999999984 2356999999999999999999999985 999999999999999999999999999853
Q ss_pred CCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchh--hHHHHHHHHHhhCCcccc
Q 040908 600 EEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKF--YLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 600 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~--~l~~~~~~~~~~~~~~~~ 677 (790)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ....+.........+
T Consensus 204 ~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--- 279 (396)
T 4dc2_A 204 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--- 279 (396)
T ss_dssp CCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC---
T ss_pred ccCC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc---
Confidence 3222 2234567999999999999999999999999999999999999999643221110 001111111111111
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLM 712 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 712 (790)
. ++.....++.+++..||+.||.+||++
T Consensus 280 ---~----~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 ---R----IPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ---C----CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ---C----CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1 111233467889999999999999985
No 90
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4.8e-40 Score=356.28 Aligned_cols=255 Identities=27% Similarity=0.416 Sum_probs=201.5
Q ss_pred cCcceeeeecccCcEEEEeeeec-CCc----EEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA-DGT----LIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~-~g~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
++|++.+.||+|+||.||+|... +++ +||+|.+.... ......+.+|+.++++++||||++++++|. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57899999999999999999854 444 37888775432 233456788999999999999999999986 466899
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
||||+++|+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCccccc
Confidence 99999999999999533 346899999999999999999999985 999999999999999999999999999876
Q ss_pred CCCCcc-eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 600 EEDNTH-ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 600 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
...... ......||..|+|||++.+..++.++|||||||++|||+| |+.||......+.... ...+...
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-------~~~~~~~-- 236 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL-------LEKGERL-- 236 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHH-------HHTTCBC--
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHH-------HHcCCCC--
Confidence 544322 2344668889999999999999999999999999999999 9999976543322111 1111110
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
.. +......+.+++..||+.||.+||++.|+++.|+...
T Consensus 237 ~~-------~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 237 AQ-------PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp CC-------CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred CC-------CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00 1112234678899999999999999999999998764
No 91
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.3e-39 Score=345.20 Aligned_cols=263 Identities=20% Similarity=0.303 Sum_probs=200.2
Q ss_pred cCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57999999999999999999964 68999999986543 2334678899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCC
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 602 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 602 (790)
|+++ ++.+.+. .....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~---~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFD---SCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHH---HTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9986 5555552 22356899999999999999999999985 999999999999999999999999999866433
Q ss_pred CcceeeccccCCCcccHHHhhcCC-CCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhh--CC---ccc
Q 040908 603 NTHISTRVAGTFGYMAPEYAMRGH-LTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQ--GN---LME 676 (790)
Q Consensus 603 ~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--~~---~~~ 676 (790)
.. ......||+.|+|||++.+.. ++.++|||||||++|||++|+.|+........ .+.......... .. ..+
T Consensus 155 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 232 (292)
T 3o0g_A 155 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIFRLLGTPTEEQWPSMTK 232 (292)
T ss_dssp CS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH-HHHHHHHHHCCCCTTTCTTGGG
T ss_pred cc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhhhhhcc
Confidence 22 223457899999999998765 79999999999999999999888654332211 111111110000 00 000
Q ss_pred ccC---------CCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 677 LVD---------PNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 677 ~~d---------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..+ ..............+.+++..|++.||.+|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000 00001111223456789999999999999999999875
No 92
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=358.40 Aligned_cols=249 Identities=24% Similarity=0.371 Sum_probs=203.3
Q ss_pred cCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 67999999999999999999954 58899999986532 334567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+.+|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 95 e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999943 346899999999999999999999985 99999999999999999999999999987654
Q ss_pred CCcceeeccccCCCcccHHHhhc---CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccccc
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMR---GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELV 678 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~---~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 678 (790)
.. ......||+.|+|||++.. ..++.++|||||||++|||++|+.||..........+.... . ...
T Consensus 168 ~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~---~-~~~----- 236 (384)
T 4fr4_A 168 ET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF---E-TTV----- 236 (384)
T ss_dssp TC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH---H-HCC-----
T ss_pred CC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH---h-hcc-----
Confidence 32 2345679999999999864 45889999999999999999999999754433222211111 1 110
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 040908 679 DPNLGSNVDKEQVRVMINVALLCADVSPTNRPL-MSSVVS 717 (790)
Q Consensus 679 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~ev~~ 717 (790)
. .++......+.+++..||+.||.+||+ +.++.+
T Consensus 237 -~----~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 237 -V----TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -C----CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -c----CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0 111223356789999999999999998 777654
No 93
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-39 Score=349.52 Aligned_cols=245 Identities=24% Similarity=0.377 Sum_probs=203.1
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 367999999999999999999964 68999999997542 23456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 85 ~e~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 85 MDYIEGGELFSLLR----KSQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp ECCCCSCBHHHHHH----HTSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EeCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 99999999999994 2346899999999999999999999885 9999999999999999999999999998654
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..... +..
T Consensus 158 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-----~~i~~--~~~------ 220 (318)
T 1fot_A 158 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY-----EKILN--AEL------ 220 (318)
T ss_dssp SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-----HHHHH--CCC------
T ss_pred Cc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH-----HHHHh--CCC------
Confidence 32 23467999999999999999999999999999999999999999754322211 11111 111
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRP-----LMSSVVS 717 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~ev~~ 717 (790)
.... ....++.+++..|++.||.+|| ++.|+++
T Consensus 221 ~~p~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 221 RFPP----FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp CCCT----TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCC----CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1111 2234678899999999999999 8888864
No 94
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2e-39 Score=344.78 Aligned_cols=252 Identities=22% Similarity=0.392 Sum_probs=203.8
Q ss_pred hcCcceeeeecccCcEEEEeeeecC-C-------cEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLAD-G-------TLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQ 516 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~-g-------~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 516 (790)
.++|++.+.||+|+||.||+|.... + ..||+|++........+.+.+|+.++++++||||+++++++...+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 4679999999999999999998542 3 5799999987666667889999999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCC--------e
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN--------P 588 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~--------~ 588 (790)
.++||||+++|+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +
T Consensus 87 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CEEEEECCTTCBHHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CEEEEECCCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCccccccccee
Confidence 9999999999999999943 2345899999999999999999999985 999999999999998887 9
Q ss_pred EEeecCCccccCCCCcceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHH
Q 040908 589 KISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALL 667 (790)
Q Consensus 589 kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~ 667 (790)
||+|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||++|..|+......... ...
T Consensus 161 kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~-----~~~ 230 (289)
T 4fvq_A 161 KLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK-----LQF 230 (289)
T ss_dssp EECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-----HHH
T ss_pred eeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH-----HHH
Confidence 99999998754321 23458899999999987 67899999999999999999966554332221110 111
Q ss_pred HHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 668 LKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 668 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
......+. ... ..++.+++..||+.||.+|||+.|+++.|+....
T Consensus 231 ~~~~~~~~--------~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 231 YEDRHQLP--------APK----AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp HHTTCCCC--------CCS----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred hhccCCCC--------CCC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 11111111 111 2346789999999999999999999999998764
No 95
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=358.78 Aligned_cols=247 Identities=23% Similarity=0.313 Sum_probs=196.6
Q ss_pred eeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEeccCCC
Q 040908 450 VANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENNS 528 (790)
Q Consensus 450 ~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gs 528 (790)
..+.||+|+||.||+|.. .+|+.||+|++........+.+.+|+.++++++||||+++++++.+.+..++||||+++|+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 367899999999999985 4689999999987655566789999999999999999999999999999999999999999
Q ss_pred hhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe--cCCCCeEEeecCCccccCCCCcce
Q 040908 529 LARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL--DKDLNPKISDFGLAKLDEEDNTHI 606 (790)
Q Consensus 529 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl--~~~~~~kl~DFGla~~~~~~~~~~ 606 (790)
|.+++.. ....+++..+..++.||++||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.......
T Consensus 173 L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~-- 244 (373)
T 2x4f_A 173 LFDRIID---ESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-- 244 (373)
T ss_dssp EHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--
T ss_pred HHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--
Confidence 9998842 2346899999999999999999999985 9999999999999 5677899999999987654332
Q ss_pred eeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCCCCCCC
Q 040908 607 STRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLGSNV 686 (790)
Q Consensus 607 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 686 (790)
.....||+.|+|||++....++.++|||||||++|||++|+.||......+.. . ......... .+..
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~--~---~i~~~~~~~----~~~~---- 311 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL--N---NILACRWDL----EDEE---- 311 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH--H---HHHHTCCCS----CSGG----
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHH--H---HHHhccCCC----Chhh----
Confidence 23356999999999999889999999999999999999999999765432211 1 111110010 0000
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 687 DKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 687 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
......++.+++..|++.||.+||++.|+++
T Consensus 312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 312 FQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0122356788999999999999999999987
No 96
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=349.47 Aligned_cols=256 Identities=30% Similarity=0.501 Sum_probs=198.7
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEec
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYL 524 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 524 (790)
.++|++.+.||+|+||.||+|... ++.||||++... ...+.|.+|+.++++++||||+++++++. +..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence 357899999999999999999975 788999998643 34567999999999999999999999886 3478999999
Q ss_pred cCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCC-eEEeecCCccccCCCC
Q 040908 525 ENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN-PKISDFGLAKLDEEDN 603 (790)
Q Consensus 525 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~-~kl~DFGla~~~~~~~ 603 (790)
++|+|.+++..... ...+++..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||+++.....
T Consensus 82 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp TTCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 99999999964322 235788999999999999999999943346999999999999998887 799999999754432
Q ss_pred cceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCCCC
Q 040908 604 THISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLG 683 (790)
Q Consensus 604 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 683 (790)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||........ ...|.. ..+.. +...
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~---~~~~~-----~~~~ 226 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF--RIMWAV---HNGTR-----PPLI 226 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH--HHHHHH---HTTCC-----CCCB
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH--HHHHHH---hcCCC-----CCcc
Confidence 1234699999999999999999999999999999999999999975332211 111111 11111 1111
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 684 SNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 684 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
.. ....+.+++.+||+.||.+|||+.|+++.|+....
T Consensus 227 ~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 227 KN----LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp TT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred cc----cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 12 23467889999999999999999999999987643
No 97
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.5e-39 Score=344.42 Aligned_cols=257 Identities=26% Similarity=0.402 Sum_probs=203.6
Q ss_pred HhcCcceeeeecccCcEEEEeeeecC----CcEEEEEEcccc-chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLAD----GTLIAVKQLSAK-SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLL 518 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~~----g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 518 (790)
..++|++.+.||+|+||.||+|...+ +..||+|.+... .....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 45789999999999999999998543 346999998765 33345679999999999999999999999865 4568
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccc
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 598 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~ 598 (790)
+||||+++++|.+++. .....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 89 ~v~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 89 IIMELYPYGELGHYLE---RNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEECCTTCBHHHHHH---HHTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEecCCCCCHHHHHH---hccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcc
Confidence 9999999999999994 23356899999999999999999999985 99999999999999999999999999987
Q ss_pred cCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 599 DEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 599 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
.............+|+.|+|||++.+..++.++||||||+++|||+| |+.||.......... .... +...
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~------~~~~-~~~~-- 233 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG------VLEK-GDRL-- 233 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHH------HHHH-TCCC--
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHH------HHhc-CCCC--
Confidence 65543333344567889999999999999999999999999999998 999997543332111 1111 1110
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
.... .....+.+++..||+.||.+||++.|+++.|+...
T Consensus 234 ---~~~~----~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 234 ---PKPD----LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp ---CCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCC----CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 0111 12346788999999999999999999999998653
No 98
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.3e-40 Score=356.11 Aligned_cols=246 Identities=24% Similarity=0.351 Sum_probs=201.8
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|.+.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 36899999999999999999995 578999999986532 22345788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+ +|+|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 88 ~E~~-~g~l~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 88 IEYA-GGELFDYIV----EKKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp ECCC-CEEHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EECC-CCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 9999 789999883 2356999999999999999999999985 9999999999999999999999999998665
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCC-CChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHL-TDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVD 679 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 679 (790)
.... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......... +.+.
T Consensus 160 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~----------------~~i~ 221 (336)
T 3h4j_B 160 DGNF--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF----------------KKVN 221 (336)
T ss_dssp TSBT--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB----------------CCCC
T ss_pred CCcc--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH----------------HHHH
Confidence 4322 234579999999999987765 67999999999999999999999754322111 1111
Q ss_pred CCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 680 PNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 680 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. ....+......+.+++..|++.||.+|||+.|+++
T Consensus 222 ~~-~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 222 SC-VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp SS-CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred cC-CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 00 01112223456788999999999999999999986
No 99
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=353.54 Aligned_cols=265 Identities=19% Similarity=0.218 Sum_probs=198.6
Q ss_pred hcCcceeeeecccCcEEEEeeeec----CCcEEEEEEccccchh-----------cHHHHHHHHHHhhccCCCceeeeee
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA----DGTLIAVKQLSAKSKQ-----------GNREFVNEIGTISALQHPHLVKLYG 509 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~----~g~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~g 509 (790)
.++|++.+.||+|+||.||+|... .+..||+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367999999999999999999964 5678999998654321 1234678889999999999999999
Q ss_pred EEEe----CCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCC
Q 040908 510 CCIE----GNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKD 585 (790)
Q Consensus 510 ~~~~----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~ 585 (790)
++.. ....++||||+ +++|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccC
Confidence 9988 67899999999 9999999942 237999999999999999999999985 9999999999999988
Q ss_pred C--CeEEeecCCccccCCCCcc------eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccc
Q 040908 586 L--NPKISDFGLAKLDEEDNTH------ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEE 657 (790)
Q Consensus 586 ~--~~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~ 657 (790)
+ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 7 9999999999865432111 1134579999999999999999999999999999999999999996432222
Q ss_pred hhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 658 KFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 658 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
... ........ ..+...+...... .....++.+++..||+.||.+||++.+|++.|+...
T Consensus 268 ~~~-~~~~~~~~--~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 268 VAV-QTAKTNLL--DELPQSVLKWAPS---GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHH-HHHHHHHH--HTTTHHHHHHSCT---TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHH-HHHHHhhc--ccccHHHHhhccc---cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 111 11111111 0111111000000 012346888999999999999999999999998754
No 100
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7e-41 Score=358.09 Aligned_cols=265 Identities=26% Similarity=0.362 Sum_probs=188.6
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhc--cCCCceeeeeeEEEeCC----eEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISA--LQHPHLVKLYGCCIEGN----QLL 518 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~ 518 (790)
.++|++.+.||+|+||.||+|... |+.||||++... ....+..|.+++.. ++||||+++++++...+ ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 467999999999999999999874 889999998643 34567778888877 79999999999998776 789
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcC-----CCcEEeccCCCCcEEecCCCCeEEeec
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEES-----RLKIVHRDIKATNVLLDKDLNPKISDF 593 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~-----~~~iiHrDlk~~NILl~~~~~~kl~DF 593 (790)
+||||+++|+|.+++. ...+++..+..++.|++.||+|||... ..+|+||||||+|||++.++.+||+||
T Consensus 78 lv~e~~~~g~L~~~l~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEECCTTCCHHHHHH-----HCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EEEeccCCCCHHHHHh-----ccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeec
Confidence 9999999999999993 246889999999999999999999211 235999999999999999999999999
Q ss_pred CCccccCCCCcce---eeccccCCCcccHHHhhcC------CCCChhhHHHHHHHHHHHHhC----------CCCCcccc
Q 040908 594 GLAKLDEEDNTHI---STRVAGTFGYMAPEYAMRG------HLTDKADVYSFGIVALEIVSG----------RSNIMCKT 654 (790)
Q Consensus 594 Gla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~s~ksDV~S~Gvvl~elltG----------~~p~~~~~ 654 (790)
|+++......... .....||+.|+|||++.+. .++.++|||||||++|||+|| +.||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997654433221 2334799999999999776 344689999999999999999 55554321
Q ss_pred ccchhhHHHHHHHHHhhCCcccccCCCCCCCC-cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 655 KEEKFYLLDWALLLKEQGNLMELVDPNLGSNV-DKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 655 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
..... ....... .. .....+.....+ .......+.+++.+||+.||.+|||+.||+++|+....
T Consensus 233 ~~~~~-~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 233 PSDPS-VEEMRKV-VC----EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp C-CCC-CC-CHHH-HT----TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred CCCcc-HHHHHHH-HH----HhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 11100 0000000 00 011112221111 12667789999999999999999999999999998754
No 101
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.1e-39 Score=347.15 Aligned_cols=260 Identities=29% Similarity=0.490 Sum_probs=196.0
Q ss_pred HhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
..++|++.+.||+|+||.||+|...+ .||+|+++... ....+.|.+|+.++++++||||+++++++ ..+..++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 45789999999999999999998743 59999986543 33456799999999999999999999966 455689999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 99 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 99 QWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecccccc
Confidence 999999999999432 356899999999999999999999985 99999999999999999999999999985543
Q ss_pred CC-cceeeccccCCCcccHHHhh---cCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 602 DN-THISTRVAGTFGYMAPEYAM---RGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 602 ~~-~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
.. ........||+.|+|||++. ...++.++||||||+++|||++|+.||........ +.. ....+.....
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~----~~~~~~~~~~ 246 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIE----MVGRGSLSPD 246 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH--HHH----HHHHTSCCCC
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH--HHH----HhcccccCcc
Confidence 22 22223456999999999986 56788899999999999999999999975433221 111 1111221111
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
. ..........+.+++..||+.+|.+||++.|+++.|+...
T Consensus 247 ~-----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 247 L-----SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp T-----TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred h-----hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 1 1111223457889999999999999999999999998764
No 102
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2e-39 Score=352.73 Aligned_cols=262 Identities=26% Similarity=0.416 Sum_probs=209.4
Q ss_pred HhcCcceeeeecccCcEEEEeeee--------cCCcEEEEEEccccc-hhcHHHHHHHHHHhhcc-CCCceeeeeeEEEe
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL--------ADGTLIAVKQLSAKS-KQGNREFVNEIGTISAL-QHPHLVKLYGCCIE 513 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~--------~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 513 (790)
..++|++.+.||+|+||.||+|.. .++..||||++.... ......+.+|+.+++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 357899999999999999999985 346789999997643 33456789999999999 89999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhcCCcc------------ccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEE
Q 040908 514 GNQLLLIYEYLENNSLARALFGPEE------------HRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVL 581 (790)
Q Consensus 514 ~~~~~lV~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NIL 581 (790)
.+..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||+.+ |+||||||+|||
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEE
Confidence 9999999999999999999964322 1234899999999999999999999985 999999999999
Q ss_pred ecCCCCeEEeecCCccccCCCCcc-eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchh
Q 040908 582 LDKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKF 659 (790)
Q Consensus 582 l~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~ 659 (790)
++.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+..
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 269 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH
Confidence 999999999999999866543322 2233457889999999999899999999999999999999 99999754322211
Q ss_pred hHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 660 YLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 660 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
... ..+.. ..... .....+.+++..||+.+|.+||++.|+++.|+....
T Consensus 270 ------~~~-~~~~~-----~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 270 ------KLL-KEGHR-----MDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp ------HHH-HHTCC-----CCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------HHH-hcCCC-----CCCCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111 11111 11111 223467889999999999999999999999987653
No 103
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-39 Score=342.54 Aligned_cols=256 Identities=26% Similarity=0.405 Sum_probs=206.9
Q ss_pred hcCcceee-eecccCcEEEEeeeec---CCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEE
Q 040908 445 TNHFDVAN-KIGEGGFGPVYKGLLA---DGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 445 ~~~y~~~~-~LG~G~fG~Vy~g~~~---~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
.++|.+.+ .||+|+||.||+|... ++..||||++.... ....+.+.+|+.++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 35677776 9999999999999853 57889999997643 34456799999999999999999999999 5567899
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
||||+++++|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 87 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEECCTTEEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeee
Confidence 9999999999999943 2356899999999999999999999985 999999999999999999999999999876
Q ss_pred CCCCcce--eeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 600 EEDNTHI--STRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 600 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
....... .....||+.|+|||++.+..++.++||||||+++|||+| |+.||......+.. .. ...+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---~~----i~~~~~-- 231 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM---AF----IEQGKR-- 231 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH---HH----HHTTCC--
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH---HH----HhcCCc--
Confidence 5433222 223457889999999998899999999999999999999 99999754432211 11 111111
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
+ ..+......+.+++..||+.+|.+||++.|+++.|+...
T Consensus 232 ---~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 232 ---M----ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp ---C----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---C----CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 112223457888999999999999999999999998654
No 104
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=357.53 Aligned_cols=263 Identities=25% Similarity=0.387 Sum_probs=207.5
Q ss_pred hcCcceeeeecccCcEEEEeeee-----cCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCC--eE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-----ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGN--QL 517 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-----~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~ 517 (790)
.++|++.+.||+|+||.||+|.+ .+|+.||||++........+.+.+|+.++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 45789999999999999999983 368899999998766666678999999999999999999999987644 67
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
++||||+++++|.+++.. ....+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 120 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp EEEECCCTTCBHHHHHHH---STTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEECCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchh
Confidence 999999999999999942 2346899999999999999999999985 9999999999999999999999999998
Q ss_pred ccCCCCcce--eeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccc---------hhhHHHHHH
Q 040908 598 LDEEDNTHI--STRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEE---------KFYLLDWAL 666 (790)
Q Consensus 598 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~---------~~~l~~~~~ 666 (790)
......... .....++..|+|||.+.+..++.++||||||+++|||+||+.|+....... .........
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH
Confidence 765543321 223457788999999999889999999999999999999999886431100 000000000
Q ss_pred HHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040908 667 LLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGR 722 (790)
Q Consensus 667 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~ 722 (790)
+.+........+......+.+++..||+.||.+||++.|+++.|+..
T Consensus 274 ---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l 320 (326)
T 2w1i_A 274 ---------ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320 (326)
T ss_dssp ---------HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred ---------HHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11111111111222345688899999999999999999999999865
No 105
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=9.5e-40 Score=356.53 Aligned_cols=250 Identities=26% Similarity=0.381 Sum_probs=203.1
Q ss_pred HHHhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCe
Q 040908 442 KAATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQ 516 (790)
Q Consensus 442 ~~~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 516 (790)
....++|++.+.||+|+||.||+|... +|+.||+|+++... ......+..|..++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 445689999999999999999999965 68999999997642 33456688899999887 99999999999999999
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCc
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 596 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla 596 (790)
.++||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||++
T Consensus 93 ~~lv~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQ----SCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEEECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhh
Confidence 999999999999999993 2356899999999999999999999985 999999999999999999999999999
Q ss_pred cccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 597 KLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 597 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... ... .+.
T Consensus 166 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~-----~i~--~~~--- 234 (345)
T 1xjd_A 166 KENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH-----SIR--MDN--- 234 (345)
T ss_dssp BCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-----HHH--HCC---
T ss_pred hhcccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHH-----HHH--hCC---
Confidence 85432222 2345679999999999999999999999999999999999999997654322111 111 111
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMS-SVV 716 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~-ev~ 716 (790)
+.... ....++.+++..|++.||.+||++. |+.
T Consensus 235 ---~~~p~----~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 235 ---PFYPR----WLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ---CCCCT----TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ---CCCCc----ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11111 2234678899999999999999987 554
No 106
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.4e-39 Score=361.60 Aligned_cols=249 Identities=23% Similarity=0.368 Sum_probs=196.2
Q ss_pred cCcceeeeecccCcEEEEeeeecCCcEEEEEEcccc--chhcHHHHHHHHHHhhccC--CCceeeeeeEEEeCCeEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAK--SKQGNREFVNEIGTISALQ--HPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lV~ 521 (790)
++|++.+.||+|+||.||+|...+++.||||++... .......+.+|+.++.+++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 469999999999999999999878999999998653 2334567999999999996 599999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
| +.+++|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++....
T Consensus 136 E-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp E-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred e-cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9 678899999942 346899999999999999999999985 99999999999995 57999999999987654
Q ss_pred CCcc-eeeccccCCCcccHHHhhc-----------CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHH
Q 040908 602 DNTH-ISTRVAGTFGYMAPEYAMR-----------GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLK 669 (790)
Q Consensus 602 ~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~ 669 (790)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~-----~~---- 277 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-----KL---- 277 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-----HH----
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH-----HH----
Confidence 3322 2345679999999999875 4688999999999999999999999964322110 00
Q ss_pred hhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 670 EQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 670 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..++++.....++......+.+++..||+.||.+||++.|+++
T Consensus 278 -----~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 278 -----HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp -----HHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -----HHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 1111221111112122346788999999999999999999986
No 107
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=354.87 Aligned_cols=251 Identities=24% Similarity=0.335 Sum_probs=188.9
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
..++|++.+.||+|+||.||+|... +++.||||++.... ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 4578999999999999999999965 57899999987542 34568899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC---CCCeEEeecCCcccc
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKISDFGLAKLD 599 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~DFGla~~~ 599 (790)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++..
T Consensus 129 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 129 LVTGGELFDRIVE----KGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp CCCSCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred eCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 9999999999943 246899999999999999999999985 999999999999975 889999999999865
Q ss_pred CCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccC
Q 040908 600 EEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVD 679 (790)
Q Consensus 600 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 679 (790)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ + +... ..... ....
T Consensus 202 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~--~~~i--~~~~~-~~~~ 272 (349)
T 2w4o_A 202 EHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF--M--FRRI--LNCEY-YFIS 272 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH--H--HHHH--HTTCC-CCCT
T ss_pred Cccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH--H--HHHH--HhCCC-ccCC
Confidence 4332 22346799999999999999999999999999999999999999965433221 0 1111 11111 0111
Q ss_pred CCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 680 PNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 680 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.........+.+++..|++.||.+|||+.|+++
T Consensus 273 -----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 273 -----PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -----TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -----chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111123356789999999999999999999987
No 108
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=379.34 Aligned_cols=256 Identities=26% Similarity=0.396 Sum_probs=202.7
Q ss_pred hcCcceee-eecccCcEEEEeeeec---CCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEE
Q 040908 445 TNHFDVAN-KIGEGGFGPVYKGLLA---DGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 445 ~~~y~~~~-~LG~G~fG~Vy~g~~~---~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
.+++.+.+ .||+|+||.||+|.+. ++..||||+++... ....++|.+|+.+|++++|||||+++++|.. +..++
T Consensus 334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l 412 (613)
T 2ozo_A 334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 412 (613)
T ss_dssp TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence 34555555 8999999999999864 45679999997653 3356789999999999999999999999976 56899
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
||||+++|+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 413 v~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 413 VMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp EEECCTTCBHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred EEEeCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 99999999999999532 356899999999999999999999985 999999999999999999999999999876
Q ss_pred CCCCccee--eccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 600 EEDNTHIS--TRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 600 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
........ ....+|+.|+|||++....++.++|||||||++|||+| |+.||......+.. . ....+..
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~---~----~i~~~~~-- 557 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM---A----FIEQGKR-- 557 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHH---H----HHHTTCC--
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH---H----HHHcCCC--
Confidence 54332221 22346789999999999999999999999999999998 99999765433211 1 1111111
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
...+......+.+++..||+.+|.+||++.+|++.|+...
T Consensus 558 -------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 558 -------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp -------CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1122233457889999999999999999999999998643
No 109
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.5e-39 Score=353.18 Aligned_cols=261 Identities=21% Similarity=0.247 Sum_probs=201.1
Q ss_pred HHHHhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEcccc-----chhcHHHHHHHHHHhhccCCCceeeeeeEEEeC
Q 040908 441 IKAATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAK-----SKQGNREFVNEIGTISALQHPHLVKLYGCCIEG 514 (790)
Q Consensus 441 ~~~~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 514 (790)
+....++|++.+.||+|+||.||+|.. .++..||+|++... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 456678999999999999999999985 46889999998654 234456799999999999999999999999999
Q ss_pred CeEEEEEEeccCCChhhhhcCCcc------------------------------------ccCCCChhhHHHHHHHHHHH
Q 040908 515 NQLLLIYEYLENNSLARALFGPEE------------------------------------HRLKLDWPTRHNICIGIARG 558 (790)
Q Consensus 515 ~~~~lV~Ey~~~gsL~~~l~~~~~------------------------------------~~~~l~~~~~~~i~~~ia~a 558 (790)
+..++||||+++|+|.+++..... ....+++..+..++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999999842110 01223567788899999999
Q ss_pred HHHhhhcCCCcEEeccCCCCcEEecCCC--CeEEeecCCccccCCCC---cceeeccccCCCcccHHHhhc--CCCCChh
Q 040908 559 LAYLHEESRLKIVHRDIKATNVLLDKDL--NPKISDFGLAKLDEEDN---THISTRVAGTFGYMAPEYAMR--GHLTDKA 631 (790)
Q Consensus 559 L~yLH~~~~~~iiHrDlk~~NILl~~~~--~~kl~DFGla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~--~~~s~ks 631 (790)
|+|||+.+ |+||||||+|||++.++ .+||+|||+++...... ........||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999985 99999999999998776 89999999998653322 112344679999999999975 6789999
Q ss_pred hHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCC
Q 040908 632 DVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPL 711 (790)
Q Consensus 632 DV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt 711 (790)
|||||||++|||++|+.||......+.. ..... ... ....+ ........+.+++..|++.||.+||+
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~------~~~~~-~~~-~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTI------SQVLN-KKL-CFENP-----NYNVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHHHH-CCC-CTTSG-----GGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHH------HHHHh-ccc-ccCCc-----ccccCCHHHHHHHHHHcCCChhHCCC
Confidence 9999999999999999999755432211 11111 110 00000 01112356788999999999999999
Q ss_pred HHHHHH
Q 040908 712 MSSVVS 717 (790)
Q Consensus 712 ~~ev~~ 717 (790)
+.|+++
T Consensus 325 ~~~~l~ 330 (345)
T 3hko_A 325 AMRALQ 330 (345)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999987
No 110
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=351.13 Aligned_cols=264 Identities=22% Similarity=0.321 Sum_probs=206.2
Q ss_pred HhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEe----CCeEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIE----GNQLL 518 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~ 518 (790)
..++|++.+.||+|+||.||++.. .+|+.||||++........+.+.+|+.++++++||||+++++++.. ....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 346899999999999999999995 5789999999876666667789999999999999999999999973 34789
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccc
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 598 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~ 598 (790)
+||||+++|+|.+++.........+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 999999999999999543334467999999999999999999999985 99999999999999999999999999875
Q ss_pred cCCCCcc--------eeeccccCCCcccHHHhhcCC---CCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHH
Q 040908 599 DEEDNTH--------ISTRVAGTFGYMAPEYAMRGH---LTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALL 667 (790)
Q Consensus 599 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~ 667 (790)
....... ......||+.|+|||++.... ++.++|||||||++|||++|+.||.......... . ..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-~---~~ 259 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSV-A---LA 259 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCH-H---HH
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchh-h---HH
Confidence 4321110 012245799999999987543 6889999999999999999999986422111100 0 00
Q ss_pred HHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 668 LKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 668 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
. . ... . ..........+.+++..||+.||.+||++.|+++.|+....
T Consensus 260 ~-~-~~~-~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 260 V-Q-NQL-S-------IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp H-H-CC----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred h-h-ccC-C-------CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 0 0 000 0 00111223468899999999999999999999999998654
No 111
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.9e-39 Score=341.94 Aligned_cols=262 Identities=22% Similarity=0.267 Sum_probs=202.1
Q ss_pred HhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEE-EeCCeEEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCC-IEGNQLLLIY 521 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lV~ 521 (790)
..++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+|+.+++.++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999995 5789999998654322 23578899999999988877776665 5677889999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe---cCCCCeEEeecCCccc
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKL 598 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~DFGla~~ 598 (790)
||+ +++|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 85 e~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 85 ELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Ecc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 999 9999999842 2346999999999999999999999985 9999999999999 8899999999999986
Q ss_pred cCCCCcc------eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhC
Q 040908 599 DEEDNTH------ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQG 672 (790)
Q Consensus 599 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~ 672 (790)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......................
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc
Confidence 6543321 2234679999999999999999999999999999999999999997644332221111111111111
Q ss_pred CcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 673 NLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 673 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
..... ...+ ...+.+++..||+.||.+||++.+|++.|+...
T Consensus 238 ~~~~~-----~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 238 PIEVL-----CKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp CHHHH-----TTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred hhhhh-----hccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 11000 0111 346889999999999999999999999998754
No 112
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.4e-39 Score=353.03 Aligned_cols=244 Identities=22% Similarity=0.318 Sum_probs=203.0
Q ss_pred cCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 68999999999999999999964 68999999986542 234567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccC
Confidence 9999999999994 2346899999999999999999999985 99999999999999999999999999986643
Q ss_pred CCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPN 681 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 681 (790)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ... ..+.. .
T Consensus 194 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~------~~i-~~~~~------~ 256 (350)
T 1rdq_E 194 R----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY------EKI-VSGKV------R 256 (350)
T ss_dssp C----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHH-HHCCC------C
T ss_pred C----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHH------HHH-HcCCC------C
Confidence 2 23457999999999999999999999999999999999999999754332211 111 11111 1
Q ss_pred CCCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 040908 682 LGSNVDKEQVRVMINVALLCADVSPTNRPL-----MSSVVS 717 (790)
Q Consensus 682 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~ev~~ 717 (790)
... .....+.+++..|++.||.+||+ +.|+++
T Consensus 257 ~p~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 257 FPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CCT----TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CCC----CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 111 22346788999999999999998 777764
No 113
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=8e-39 Score=341.12 Aligned_cols=262 Identities=22% Similarity=0.265 Sum_probs=205.5
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEE-EeCCeEEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCC-IEGNQLLLIYE 522 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lV~E 522 (790)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... ...+.+|+.+++.++|++++..++++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 57899999999999999999995 5789999999865432 34688999999999988877766665 56778899999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe---cCCCCeEEeecCCcccc
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 599 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~DFGla~~~ 599 (790)
|+ +++|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 86 ~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 86 LL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp CC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred ec-CCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 99 9999999942 2346899999999999999999999985 9999999999999 58899999999999866
Q ss_pred CCCCcc------eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCC
Q 040908 600 EEDNTH------ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGN 673 (790)
Q Consensus 600 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 673 (790)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......................
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc
Confidence 543321 12346799999999999999999999999999999999999999976433222111111111111111
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 674 LMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 674 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
... +...+ ...+.+++..||+.||.+||++.+|++.|+....
T Consensus 239 ~~~-----~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 280 (296)
T 3uzp_A 239 IEV-----LCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp HHH-----HTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred hHH-----HHhhC----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHH
Confidence 100 01112 2468889999999999999999999999987543
No 114
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.1e-39 Score=352.52 Aligned_cols=270 Identities=24% Similarity=0.415 Sum_probs=214.7
Q ss_pred ccHHHHHHHhcCcceeeeecccCcEEEEeeeec------CCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeee
Q 040908 436 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLA------DGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLY 508 (790)
Q Consensus 436 ~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~------~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~ 508 (790)
+..++++...++|++.+.||+|+||.||+|... .++.||+|++.... ......+.+|+.++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 344455667789999999999999999999854 36789999997543 23345789999999999999999999
Q ss_pred eEEEeCCeEEEEEEeccCCChhhhhcCCcc------ccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe
Q 040908 509 GCCIEGNQLLLIYEYLENNSLARALFGPEE------HRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL 582 (790)
Q Consensus 509 g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl 582 (790)
+++.+.+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+.+ |+||||||+|||+
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEE
Confidence 999999999999999999999999953211 1145789999999999999999999985 9999999999999
Q ss_pred cCCCCeEEeecCCccccCCCCcc-eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhh
Q 040908 583 DKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFY 660 (790)
Q Consensus 583 ~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~ 660 (790)
+.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+| |+.||........
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-- 249 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-- 249 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH--
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH--
Confidence 99999999999999855432221 1223457889999999999999999999999999999999 8888865432211
Q ss_pred HHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 661 LLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 661 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
. .. ...+.... .+......+.+++..||+.||.+||++.|+++.|+....
T Consensus 250 -~---~~-~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 250 -L---RF-VMEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp -H---HH-HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred -H---HH-HHcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1 11 11111111 111233567889999999999999999999999988654
No 115
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.9e-39 Score=350.53 Aligned_cols=249 Identities=23% Similarity=0.330 Sum_probs=198.2
Q ss_pred cCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 520 (790)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++.++ +||||+++++++...+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57999999999999999999965 58899999997542 23345688999999988 899999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 99999999999983 2346899999999999999999999985 9999999999999999999999999998543
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchh--hHHHHHHHHHhhCCccccc
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKF--YLLDWALLLKEQGNLMELV 678 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~ 678 (790)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...............
T Consensus 162 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~---- 236 (345)
T 3a8x_A 162 RPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---- 236 (345)
T ss_dssp CTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC----
T ss_pred CCCC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC----
Confidence 2221 234567999999999999999999999999999999999999999643211100 001111111111111
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 040908 679 DPNLGSNVDKEQVRVMINVALLCADVSPTNRPLM 712 (790)
Q Consensus 679 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 712 (790)
.+ +......+.+++..||+.||.+||++
T Consensus 237 --~~----p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 --RI----PRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp --CC----CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred --CC----CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11 11223467889999999999999995
No 116
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3e-39 Score=343.18 Aligned_cols=253 Identities=25% Similarity=0.331 Sum_probs=199.1
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
.++|.+.+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 46799999999999999999995 468899999987653 3345789999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe---cCCCCeEEeecCCcccc
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 599 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~DFGla~~~ 599 (790)
|+++|+|.+++.........+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999998544334467999999999999999999999985 9999999999999 45678999999999865
Q ss_pred CCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccC
Q 040908 600 EEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVD 679 (790)
Q Consensus 600 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 679 (790)
..... .....||+.|+|||++. +.++.++|||||||++|||++|+.||......+... .... .......
T Consensus 178 ~~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~------~~~~-~~~~~~~- 246 (285)
T 3is5_A 178 KSDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ------KATY-KEPNYAV- 246 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHHH-CCCCCCC-
T ss_pred CCccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHh------hhcc-CCccccc-
Confidence 44322 24466999999999875 578999999999999999999999997543222111 1011 1100000
Q ss_pred CCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 680 PNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 680 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.... ....+.+++..|++.||.+|||+.|+++
T Consensus 247 --~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 247 --ECRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred --ccCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011 2346778999999999999999999875
No 117
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.9e-39 Score=354.97 Aligned_cols=246 Identities=26% Similarity=0.454 Sum_probs=199.4
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.+.|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35589999999999999999995 578999999986532 23346789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+. |+|.+++. .....+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 133 ~e~~~-g~l~~~l~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 133 MEYCL-GSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EECCS-EEHHHHHH---HHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred EecCC-CCHHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 99997 68888873 23457899999999999999999999985 9999999999999999999999999998654
Q ss_pred CCCcceeeccccCCCcccHHHhh---cCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAM---RGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
.. ....||+.|+|||++. .+.++.++|||||||++|||++|+.||......... ..... +..
T Consensus 206 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~------~~~~~-~~~--- 270 (348)
T 1u5q_A 206 PA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQ-NES--- 270 (348)
T ss_dssp SB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHHHH-SCC---
T ss_pred CC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHHh-cCC---
Confidence 32 2356999999999985 567899999999999999999999999654322111 11111 111
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
+... .......+.+++..||+.||.+|||+.++++
T Consensus 271 --~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 271 --PALQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp --CCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CCCC---CCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 1111 1112345788999999999999999999976
No 118
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=358.24 Aligned_cols=272 Identities=19% Similarity=0.250 Sum_probs=213.0
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCC--eEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGN--QLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV 520 (790)
.++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 467999999999999999999965 58999999997543 334567889999999999999999999998755 78999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe----cCCCCeEEeecCCc
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL----DKDLNPKISDFGLA 596 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl----~~~~~~kl~DFGla 596 (790)
|||+++|+|.+++..... ...+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 88 ~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp ECCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 999999999999954322 234899999999999999999999985 9999999999999 77788999999999
Q ss_pred cccCCCCcceeeccccCCCcccHHHhhc--------CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHH
Q 040908 597 KLDEEDNTHISTRVAGTFGYMAPEYAMR--------GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLL 668 (790)
Q Consensus 597 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~ 668 (790)
+....... .....||+.|+|||++.. ..++.++|||||||++|||++|+.||.......... ......
T Consensus 164 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~--~~~~~~ 239 (396)
T 4eut_A 164 RELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK--EVMYKI 239 (396)
T ss_dssp EECCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCH--HHHHHH
T ss_pred eEccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchH--HHHHHH
Confidence 86654322 234569999999999875 467789999999999999999999997533221111 111111
Q ss_pred HhhC---Ccccc----------c-CCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 669 KEQG---NLMEL----------V-DPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 669 ~~~~---~~~~~----------~-d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
.... .+... . +..............+.+++..||+.||++||++.|+++.++.+..
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 1111 00000 0 0111223456778889999999999999999999999999887654
No 119
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.1e-38 Score=338.09 Aligned_cols=251 Identities=22% Similarity=0.359 Sum_probs=203.7
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 578999999999999999999854 68899999986542 334567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCC---eEEeecCCccc
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKISDFGLAKL 598 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~DFGla~~ 598 (790)
||+++++|.+.+. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIV----AREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999999998883 2356899999999999999999999985 999999999999987655 99999999986
Q ss_pred cCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccccc
Q 040908 599 DEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELV 678 (790)
Q Consensus 599 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 678 (790)
...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......... .. ..+.. ...
T Consensus 158 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~------~~-~~~~~-~~~ 227 (284)
T 3kk8_A 158 VNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA------QI-KAGAY-DYP 227 (284)
T ss_dssp CCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HH-HHTCC-CCC
T ss_pred cccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHH------HH-Hhccc-cCC
Confidence 654332 234679999999999999999999999999999999999999997543322111 11 11111 010
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 679 DPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 679 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.+. .......+.+++..|++.||.+|||+.|+++
T Consensus 228 ~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 228 SPE-----WDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp TTT-----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred chh-----hcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 110 0122346788999999999999999999986
No 120
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2e-39 Score=356.74 Aligned_cols=252 Identities=22% Similarity=0.310 Sum_probs=192.5
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEY 523 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 523 (790)
.++|++.+.||+|+||.||++... +++.||||++.... .....+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 468999999999999999999965 78999999986533 2346688999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCC--eEEeecCCccccCC
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN--PKISDFGLAKLDEE 601 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~--~kl~DFGla~~~~~ 601 (790)
+++|+|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++....
T Consensus 98 ~~~~~L~~~l~----~~~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 98 ASGGELYERIC----NAGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp CCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred CCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 99999999983 2346899999999999999999999985 999999999999987765 99999999984332
Q ss_pred CCcceeeccccCCCcccHHHhhcCCCCCh-hhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHLTDK-ADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k-sDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
.. ......||+.|+|||++.+..++.+ +|||||||++|||++|+.||.......... ........ ... .
T Consensus 171 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~--~~~~~~~~-~~~-~---- 240 (361)
T 3uc3_A 171 HS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYR--KTIQRILS-VKY-S---- 240 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHH--HHHHHHHT-TCC-C----
T ss_pred cC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHH--HHHHHHhc-CCC-C----
Confidence 22 2234569999999999988887766 899999999999999999997644322211 11111110 000 0
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
... .......+.+++.+||+.||.+|||+.|+++
T Consensus 241 -~~~--~~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 241 -IPD--DIRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp -CCT--TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred -CCC--cCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 000 0012346788999999999999999999986
No 121
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=8.1e-40 Score=359.45 Aligned_cols=274 Identities=24% Similarity=0.316 Sum_probs=209.5
Q ss_pred CCCccHHHHHHHhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccC-----CCceee
Q 040908 433 TGSFTLRQIKAATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQ-----HPHLVK 506 (790)
Q Consensus 433 ~~~~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~ 506 (790)
...+++++.....++|++.++||+|+||.||+|.. .+++.||||++... ......+..|+.+++.++ ||||++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 34556666667789999999999999999999996 46889999998642 334456788999999886 999999
Q ss_pred eeeEEEeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC--
Q 040908 507 LYGCCIEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK-- 584 (790)
Q Consensus 507 l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~-- 584 (790)
+++++...+..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~ 174 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPY 174 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTT
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEcccc
Confidence 999999999999999999 999999995322 235899999999999999999999985 999999999999975
Q ss_pred -----------------------CCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHH
Q 040908 585 -----------------------DLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVAL 641 (790)
Q Consensus 585 -----------------------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ 641 (790)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 250 (360)
T 3llt_A 175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250 (360)
T ss_dssp CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred ccccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHH
Confidence 7899999999998654322 3457999999999999999999999999999999
Q ss_pred HHHhCCCCCccccccchhhHHHHH--------HHHHhhCCcccccCCC-----CCCCC-cH---------------HHHH
Q 040908 642 EIVSGRSNIMCKTKEEKFYLLDWA--------LLLKEQGNLMELVDPN-----LGSNV-DK---------------EQVR 692 (790)
Q Consensus 642 elltG~~p~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~d~~-----l~~~~-~~---------------~~~~ 692 (790)
||+||+.||......+........ ............++.. ..... .. ....
T Consensus 251 ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (360)
T 3llt_A 251 ELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHE 330 (360)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCH
T ss_pred HHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHH
Confidence 999999999765433222111100 0000000000000000 00000 00 0115
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 693 VMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 693 ~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.+.+++..||+.||.+|||+.|+++
T Consensus 331 ~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 331 LFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHhcCChhhCCCHHHHhc
Confidence 6779999999999999999999864
No 122
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=347.80 Aligned_cols=264 Identities=24% Similarity=0.344 Sum_probs=198.6
Q ss_pred HhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccch-----hcHHHHHHHHHHhhccC---CCceeeeeeEEEeC
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSK-----QGNREFVNEIGTISALQ---HPHLVKLYGCCIEG 514 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~-----~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~ 514 (790)
..++|++.+.||+|+||.||+|.. .+|+.||||++..... .....+.+|+.++++++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467999999999999999999995 5689999999864321 12346677888777765 99999999999875
Q ss_pred C-----eEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeE
Q 040908 515 N-----QLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPK 589 (790)
Q Consensus 515 ~-----~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 589 (790)
. ..++||||+. |+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEE
Confidence 5 5899999997 59999995432 234899999999999999999999985 99999999999999999999
Q ss_pred EeecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHH
Q 040908 590 ISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLK 669 (790)
Q Consensus 590 l~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~ 669 (790)
|+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... ......
T Consensus 161 l~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~--i~~~~~ 236 (308)
T 3g33_A 161 LADFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK--IFDLIG 236 (308)
T ss_dssp ECSCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHH--HHHHHC
T ss_pred EeeCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHHHhC
Confidence 999999986643322 2446799999999999999999999999999999999999999976543322111 111000
Q ss_pred h--hCCcccc-------cCCCCCCC---CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 670 E--QGNLMEL-------VDPNLGSN---VDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 670 ~--~~~~~~~-------~d~~l~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
. ....... ..+..... ...+....+.+++..|++.||.+|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 237 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0 0000000 00000000 00122356788999999999999999999875
No 123
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.5e-39 Score=349.41 Aligned_cols=266 Identities=24% Similarity=0.403 Sum_probs=189.1
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccch-hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK-QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
.++|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+|+.++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 468999999999999999999854 689999999865432 234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCc--cccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 523 YLENNSLARALFGPE--EHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 523 y~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|++ |+|.+++.... .....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999884321 11245899999999999999999999985 9999999999999999999999999998664
Q ss_pred CCCcceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhh-CCcccc-
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQ-GNLMEL- 677 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~-~~~~~~- 677 (790)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+ ....... ......
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI--FDIMGTPNESLWPSV 236 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HHHHCSCCTTTCGGG
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH--HHHhCCCChhHhhhh
Confidence 3322 1234568999999999976 46899999999999999999999999765433221111 0000000 000000
Q ss_pred -----cCCCCC----CCC--------cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 678 -----VDPNLG----SNV--------DKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 678 -----~d~~l~----~~~--------~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..+... ... .......+.+++..|++.||.+|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000000 000 0012346889999999999999999999865
No 124
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=350.52 Aligned_cols=257 Identities=26% Similarity=0.443 Sum_probs=199.9
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCc----EEEEEEcccc-chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGT----LIAVKQLSAK-SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLL 518 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~----~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 518 (790)
.++|++.+.||+|+||.||+|... +++ +||+|.+... .....+.+.+|+.++++++||||++++++|.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 467999999999999999999853 444 3577777543 3345678999999999999999999999998765 78
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccc
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 598 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~ 598 (790)
+|+||+.+|+|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~v~~~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCCSSCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 99999999999999943 2356899999999999999999999985 99999999999999999999999999986
Q ss_pred cCCCCcc-eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 599 DEEDNTH-ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 599 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+.... . ..+.
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~------~-~~~~--- 236 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI------L-EKGE--- 236 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH------H-HTTC---
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH------H-HcCC---
Confidence 6433222 2233457889999999999999999999999999999999 9999976543332111 1 1111
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
....+......+.+++..||+.||.+||++.|+++.|+....
T Consensus 237 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 237 ------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred ------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 011112233467889999999999999999999999987654
No 125
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.2e-39 Score=366.66 Aligned_cols=248 Identities=25% Similarity=0.334 Sum_probs=194.2
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEcccc---chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAK---SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .......+.+|+.+++.++||||++++++|...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999995 46899999999754 233345678999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhh-cCCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHE-ESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
|||+++|+|.+++. ....+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999999999983 23578999999999999999999998 5 4999999999999999999999999999854
Q ss_pred CCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccC
Q 040908 600 EEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVD 679 (790)
Q Consensus 600 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 679 (790)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........... ... ...
T Consensus 300 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~-----i~~--~~~----- 366 (446)
T 4ejn_A 300 IKDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL-----ILM--EEI----- 366 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-----HHH--CCC-----
T ss_pred cCCCc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHH-----HHh--CCC-----
Confidence 33222 23446799999999999999999999999999999999999999975443221111 111 110
Q ss_pred CCCCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 040908 680 PNLGSNVDKEQVRVMINVALLCADVSPTNRP-----LMSSVVS 717 (790)
Q Consensus 680 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~ev~~ 717 (790)
.... ....++.+++..||+.||.+|| ++.|+++
T Consensus 367 -~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 -RFPR----TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp -CCCT----TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -CCCc----cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1111 2234678899999999999999 9999865
No 126
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=5.5e-39 Score=339.24 Aligned_cols=247 Identities=21% Similarity=0.320 Sum_probs=204.5
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
..++|++.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 3567999999999999999999965 577899999987666667889999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe---cCCCCeEEeecCCcccc
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 599 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~DFGla~~~ 599 (790)
|+++++|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||++...
T Consensus 87 ~~~~~~L~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 87 LCTGGELFERVV----HKRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp CCCSCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred ccCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 999999999883 2356899999999999999999999985 9999999999999 78899999999999866
Q ss_pred CCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccC
Q 040908 600 EEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVD 679 (790)
Q Consensus 600 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 679 (790)
..... .....||+.|+|||++.+ .++.++||||||+++|||++|+.||......+.. ... ..+..
T Consensus 160 ~~~~~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~------~~~-~~~~~----- 224 (277)
T 3f3z_A 160 KPGKM--MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVM------LKI-REGTF----- 224 (277)
T ss_dssp CTTSC--BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHH-HHCCC-----
T ss_pred cCccc--hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHH------HHH-HhCCC-----
Confidence 54332 234569999999998865 4899999999999999999999999764432211 011 11111
Q ss_pred CCCCCCCcH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 680 PNLGSNVDK----EQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 680 ~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..+. .....+.+++..|++.||.+||++.|+++
T Consensus 225 -----~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 225 -----TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -----CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -----CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111 12356788999999999999999999875
No 127
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=5.6e-39 Score=351.51 Aligned_cols=249 Identities=24% Similarity=0.344 Sum_probs=202.4
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLL 518 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 518 (790)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ......+..|..++..+ +||||+++++++...+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3578999999999999999999965 47899999997642 23456788999999988 8999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccc
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 598 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~ 598 (790)
+||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++.
T Consensus 98 lv~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQ----QVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 9999999999999993 2346899999999999999999999985 99999999999999999999999999985
Q ss_pred cCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccccc
Q 040908 599 DEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELV 678 (790)
Q Consensus 599 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 678 (790)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ..... +..
T Consensus 171 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~------~~i~~-~~~---- 238 (353)
T 2i0e_A 171 NIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF------QSIME-HNV---- 238 (353)
T ss_dssp CCCTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHHHH-CCC----
T ss_pred cccCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHH------HHHHh-CCC----
Confidence 432222 234567999999999999999999999999999999999999999764432211 11111 111
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 040908 679 DPNLGSNVDKEQVRVMINVALLCADVSPTNRPL-----MSSVVS 717 (790)
Q Consensus 679 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~ev~~ 717 (790)
. ++.....++.+++..|++.||.+||+ +.|+++
T Consensus 239 --~----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 239 --A----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp --C----CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred --C----CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1 11123356788999999999999996 466653
No 128
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-39 Score=349.79 Aligned_cols=258 Identities=27% Similarity=0.447 Sum_probs=201.3
Q ss_pred hcCcceeeeecccCcEEEEeeeecC-----CcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLAD-----GTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLL 518 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~-----g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 518 (790)
.++|++.+.||+|+||.||+|.... +..||||++.... ......+.+|+.++++++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3578889999999999999998642 2469999987543 334557899999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccc
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 598 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~ 598 (790)
+||||+++|+|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 123 IITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchh
Confidence 99999999999999942 2356899999999999999999999985 99999999999999999999999999986
Q ss_pred cCCCCcc--eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcc
Q 040908 599 DEEDNTH--ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLM 675 (790)
Q Consensus 599 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 675 (790)
....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+.. ... ..+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~------~~~-~~~~~- 268 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM------KAI-NDGFR- 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH------HHH-HTTCC-
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHH------HHH-HCCCc-
Confidence 6543221 1223446889999999999999999999999999999999 99999654322111 111 11110
Q ss_pred cccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 676 ELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 676 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
.. .+......+.+++.+||+.+|.+||++.|+++.|+....
T Consensus 269 ----~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 269 ----LP----TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp ----CC----CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ----CC----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 01 111234567889999999999999999999999987654
No 129
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.2e-39 Score=350.12 Aligned_cols=248 Identities=24% Similarity=0.357 Sum_probs=193.5
Q ss_pred hcCcceeeeecccCcEEEEeeee----cCCcEEEEEEccccc----hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL----ADGTLIAVKQLSAKS----KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQ 516 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~----~~g~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 516 (790)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+.++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46899999999999999999986 468999999987542 2234567889999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCc
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 596 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla 596 (790)
.++||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLE----REGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 999999999999999993 2346899999999999999999999985 999999999999999999999999999
Q ss_pred cccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 597 KLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 597 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..... ..
T Consensus 169 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~------~~i~~-~~--- 237 (327)
T 3a62_A 169 KESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI------DKILK-CK--- 237 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH------HHHHH-TC---
T ss_pred cccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHH------HHHHh-CC---
Confidence 85433222 234467999999999999999999999999999999999999999754332211 11111 11
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRP-----LMSSVVS 717 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~ev~~ 717 (790)
..+ +......+.+++.+||+.||.+|| ++.|+++
T Consensus 238 ---~~~----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 238 ---LNL----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ---CCC----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ---CCC----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 011 112235678899999999999999 6777765
No 130
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.5e-39 Score=347.21 Aligned_cols=251 Identities=22% Similarity=0.306 Sum_probs=204.3
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchh------cHHHHHHHHHHhhccCCCceeeeeeEEEeCCeE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQ------GNREFVNEIGTISALQHPHLVKLYGCCIEGNQL 517 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 517 (790)
.++|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467999999999999999999964 6899999998754321 356799999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCC----CeEEeec
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL----NPKISDF 593 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~----~~kl~DF 593 (790)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccC
Confidence 999999999999999943 346899999999999999999999985 99999999999999888 7999999
Q ss_pred CCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCC
Q 040908 594 GLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGN 673 (790)
Q Consensus 594 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 673 (790)
|+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .... ...
T Consensus 164 g~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~i~-~~~ 234 (321)
T 2a2a_A 164 GLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------ANIT-SVS 234 (321)
T ss_dssp TTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH------HHHH-TTC
T ss_pred ccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHH------HHHH-hcc
Confidence 99986654322 23456999999999999999999999999999999999999999754332211 0000 000
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 674 LMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 674 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
. ..++.. .......+.+++..|++.||.+|||+.|+++
T Consensus 235 ~--~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 235 Y--DFDEEF----FSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp C--CCCHHH----HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred c--ccChhh----hcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0 000000 0112346789999999999999999999976
No 131
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.3e-39 Score=355.88 Aligned_cols=267 Identities=17% Similarity=0.255 Sum_probs=202.4
Q ss_pred hcCcceeeeeccc--CcEEEEeeeec-CCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEE
Q 040908 445 TNHFDVANKIGEG--GFGPVYKGLLA-DGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 445 ~~~y~~~~~LG~G--~fG~Vy~g~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
.++|++.+.||+| +||.||+|... +|+.||||++.... ....+.+.+|+.++++++|||||++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4689999999999 99999999965 68999999997543 3334678889999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
||||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 999999999999994321 246899999999999999999999985 999999999999999999999999998643
Q ss_pred CCCCc------ceeeccccCCCcccHHHhhc--CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHh-
Q 040908 600 EEDNT------HISTRVAGTFGYMAPEYAMR--GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKE- 670 (790)
Q Consensus 600 ~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~- 670 (790)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ +......
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~ 257 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK-LNGTVPCL 257 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-hcCCCCcc
Confidence 22111 11122468999999999987 57899999999999999999999999754332221100 0000000
Q ss_pred --------------------hCCcccccC---CC------CCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 671 --------------------QGNLMELVD---PN------LGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 671 --------------------~~~~~~~~d---~~------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.....+.+. +. ............+.+++.+||+.||.+|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 000000000 00 000112223456889999999999999999999875
No 132
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=7e-39 Score=338.98 Aligned_cols=246 Identities=25% Similarity=0.430 Sum_probs=199.9
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|++.+.||+|+||.||+|... ++..||+|++.... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 468999999999999999999854 57799999986532 22356788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++|+|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 88 ~e~~~~~~l~~~l~----~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 88 LEYAPLGTVYRELQ----KLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp ECCCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 99999999999983 2356899999999999999999999875 9999999999999999999999999986543
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......+... ... .. ..
T Consensus 161 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~~-~~------~~ 224 (279)
T 3fdn_A 161 SSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK------RIS-RV------EF 224 (279)
T ss_dssp ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------HHH-HT------CC
T ss_pred ccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHH------HHH-hC------CC
Confidence 322 234578999999999999999999999999999999999999997543222111 101 11 11
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. +......+.+++..|++.||.+||++.|+++
T Consensus 225 ~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 225 TF----PDFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp CC----CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred CC----CCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 11 1122346788999999999999999999987
No 133
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=346.41 Aligned_cols=264 Identities=22% Similarity=0.343 Sum_probs=199.3
Q ss_pred cCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccch--hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK--QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
++|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 68999999999999999999965 589999998865432 234668899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCC
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 602 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 602 (790)
|+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 9999999998742 346899999999999999999999985 999999999999999999999999999866533
Q ss_pred CcceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHH--------HHHHhhCC
Q 040908 603 NTHISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWA--------LLLKEQGN 673 (790)
Q Consensus 603 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~~~~~~ 673 (790)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+........ ........
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 156 SD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred cc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence 22 2234568999999999976 67899999999999999999999999765443322211110 00000010
Q ss_pred c-c--cccCCCCCCCCc---HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 674 L-M--ELVDPNLGSNVD---KEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 674 ~-~--~~~d~~l~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
. . ...++....... ......+.+++..||+.||.+|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 0 011110000000 122345789999999999999999999986
No 134
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.5e-39 Score=345.19 Aligned_cols=262 Identities=23% Similarity=0.388 Sum_probs=199.0
Q ss_pred cCcceeeeecccCcEEEEeeee-cCCcEEEEEEcccc---chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAK---SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
++|++.+.||+|+||.||+|.. .+|+.||+|++... .......+.+|+.++++++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 5799999999999999999995 57899999998753 2334567899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+++++|.+++.........+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 999999999998543333466899999999999999999999985 99999999999999999999999999986544
Q ss_pred CCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPN 681 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 681 (790)
... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ....... ........
T Consensus 189 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~---- 258 (310)
T 2wqm_A 189 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL----YSLCKKI-EQCDYPPL---- 258 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH----HHHHHHH-HTTCSCCC----
T ss_pred CCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH----HHHHHHh-hcccCCCC----
Confidence 322 2233568999999999999999999999999999999999999996533211 1111111 11111111
Q ss_pred CCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 682 LGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 682 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
... .....+.+++..||+.||.+||++.+|++.|+....
T Consensus 259 ~~~----~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 259 PSD----HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp CTT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccc----ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 011 223467889999999999999999999999987653
No 135
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=349.43 Aligned_cols=267 Identities=27% Similarity=0.416 Sum_probs=198.0
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHH--HHHhhccCCCceeeeeeEEEe-----CCeE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNE--IGTISALQHPHLVKLYGCCIE-----GNQL 517 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E--~~~l~~l~H~niv~l~g~~~~-----~~~~ 517 (790)
.++|++.+.||+|+||.||+|+. +++.||||++.... ...+..| +..+..++||||+++++++.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46899999999999999999987 68899999986533 2334444 444556899999999986643 2367
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcC------CCcEEeccCCCCcEEecCCCCeEEe
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEES------RLKIVHRDIKATNVLLDKDLNPKIS 591 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~------~~~iiHrDlk~~NILl~~~~~~kl~ 591 (790)
++||||+++|+|.+++. ....++..+..++.||++||+|||+.. .++|+||||||+|||++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLS-----LHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHh-----hcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 89999999999999993 234589999999999999999999871 1259999999999999999999999
Q ss_pred ecCCccccCCCC-------cceeeccccCCCcccHHHhhc-------CCCCChhhHHHHHHHHHHHHhCCCCCccccccc
Q 040908 592 DFGLAKLDEEDN-------THISTRVAGTFGYMAPEYAMR-------GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEE 657 (790)
Q Consensus 592 DFGla~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~ 657 (790)
|||+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.|+.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 999998654322 112234569999999999976 355678999999999999999988775432211
Q ss_pred hhh------------HHHHHHHHHhhCCcccccCCCCCCC--CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 658 KFY------------LLDWALLLKEQGNLMELVDPNLGSN--VDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 658 ~~~------------l~~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
... ..++.... ..... .+.+... ........+.+++.+||+.||.+|||+.|+++.|+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLV-SREKQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHH-TTSCC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhhhcccCCCchHHHHHhhh-ccccc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 100 00111111 11111 1111111 12246678999999999999999999999999999876
Q ss_pred CC
Q 040908 724 GV 725 (790)
Q Consensus 724 ~~ 725 (790)
..
T Consensus 318 ~~ 319 (336)
T 3g2f_A 318 MI 319 (336)
T ss_dssp HC
T ss_pred HH
Confidence 43
No 136
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-38 Score=342.48 Aligned_cols=260 Identities=22% Similarity=0.264 Sum_probs=199.1
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccch---hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK---QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999964 688999999976432 2246789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++++|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLR----RQGPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 99999999999994 2346899999999999999999999985 9999999999999999999999999998665
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
...........||+.|+|||++.+..++.++||||||+++|||++|+.||....... + ..............
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~---~~~~~~~~~~~~~~-- 257 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV---M---GAHINQAIPRPSTV-- 257 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH---H---HHHHHSCCCCGGGT--
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH---H---HHHhccCCCCcccc--
Confidence 443333344679999999999998899999999999999999999999997543211 0 01111111100111
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhcCcCC
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRP-LMSSVVSMLEGRVGV 725 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~ev~~~L~~~~~~ 725 (790)
.......+.+++.+||+.||.+|| ++.++++.|+.....
T Consensus 258 ------~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 258 ------RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp ------STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred ------CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 112234578899999999999999 999999999987653
No 137
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.1e-39 Score=351.16 Aligned_cols=270 Identities=26% Similarity=0.383 Sum_probs=214.2
Q ss_pred ccHHHHHHHhcCcceeeeecccCcEEEEeeee------cCCcEEEEEEccccch-hcHHHHHHHHHHhhcc-CCCceeee
Q 040908 436 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLL------ADGTLIAVKQLSAKSK-QGNREFVNEIGTISAL-QHPHLVKL 507 (790)
Q Consensus 436 ~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~------~~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l 507 (790)
+.........++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 45556666778999999999999999999973 3568899999976433 3346789999999999 79999999
Q ss_pred eeEEEeCC-eEEEEEEeccCCChhhhhcCCccc------------cCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEecc
Q 040908 508 YGCCIEGN-QLLLIYEYLENNSLARALFGPEEH------------RLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRD 574 (790)
Q Consensus 508 ~g~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrD 574 (790)
++++...+ ..++||||+++|+|.+++...... ...+++..+..++.|+++||+|||+.+ |+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---ccccc
Confidence 99998754 589999999999999999643321 123789999999999999999999985 99999
Q ss_pred CCCCcEEecCCCCeEEeecCCccccCCCCcc-eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCcc
Q 040908 575 IKATNVLLDKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMC 652 (790)
Q Consensus 575 lk~~NILl~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~ 652 (790)
|||+|||++.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 9999999999999999999999866543332 2334568899999999999999999999999999999998 9999975
Q ss_pred ccccchhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 653 KTKEEKFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 653 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
....... .... ..+.. ..... .....+.+++..||+.||.+||++.|+++.|+...
T Consensus 254 ~~~~~~~-----~~~~-~~~~~-----~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 254 VKIDEEF-----CRRL-KEGTR-----MRAPD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp CCCSHHH-----HHHH-HHTCC-----CCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cchhHHH-----HHHh-ccCcc-----CCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 4432211 1111 11111 11111 12346788999999999999999999999998754
No 138
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-39 Score=356.23 Aligned_cols=256 Identities=26% Similarity=0.390 Sum_probs=193.9
Q ss_pred CcceeeeecccCcEEEEeeeec--CC--cEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEe-CCeEEEE
Q 040908 447 HFDVANKIGEGGFGPVYKGLLA--DG--TLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIE-GNQLLLI 520 (790)
Q Consensus 447 ~y~~~~~LG~G~fG~Vy~g~~~--~g--~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV 520 (790)
.|++.+.||+|+||.||+|.+. ++ ..||||.+.... ....+.|.+|+.++++++||||++++++|.+ .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4778899999999999999853 22 368999986543 3445789999999999999999999999764 4578999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++|+|.+++.. ....+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccc
Confidence 999999999999943 2346889999999999999999999985 9999999999999999999999999998654
Q ss_pred CCCcc---eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 601 EDNTH---ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 601 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
..... ......+|+.|+|||++.+..++.++|||||||++|||+| |..||......+.. . .. ..+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~---~---~~-~~~~~-- 314 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT---V---YL-LQGRR-- 314 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH---H---HH-HTTCC--
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH---H---HH-HcCCC--
Confidence 32211 1233557889999999999999999999999999999999 66677544332211 1 11 11111
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
... +......+.+++..||+.||.+||++.|+++.|+....
T Consensus 315 ~~~-------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 315 LLQ-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp CCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCC-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111 11223468889999999999999999999999987653
No 139
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.1e-39 Score=351.07 Aligned_cols=256 Identities=21% Similarity=0.310 Sum_probs=194.6
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCC----e
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGN----Q 516 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~ 516 (790)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+|+.++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 47899999999999999999995 578999999997642 223457899999999999999999999987654 3
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCc
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 596 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla 596 (790)
.++||||+++++|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 499999999999999994 2346899999999999999999999985 999999999999999999999999999
Q ss_pred cccCCCCcc--eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCc
Q 040908 597 KLDEEDNTH--ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNL 674 (790)
Q Consensus 597 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 674 (790)
+........ ......||+.|+|||++.+..++.++|||||||++|||+||+.||......... .........
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~------~~~~~~~~~ 237 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA------YQHVREDPI 237 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH------HHHHHCCCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHhcCCCC
Confidence 865443221 223456999999999999999999999999999999999999999754432211 111111111
Q ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH-HHh
Q 040908 675 MELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS-MLE 720 (790)
Q Consensus 675 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~-~L~ 720 (790)
... .... .....+.+++.+||+.||.+||++.+++. .+.
T Consensus 238 ~~~---~~~~----~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 277 (311)
T 3ork_A 238 PPS---ARHE----GLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277 (311)
T ss_dssp CHH---HHST----TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred Ccc---cccC----CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence 000 0001 12346788999999999999997666553 443
No 140
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.3e-39 Score=353.69 Aligned_cols=264 Identities=27% Similarity=0.416 Sum_probs=210.1
Q ss_pred HHHHhcCcceeeeecccCcEEEEeeeecC-C-----cEEEEEEccccc-hhcHHHHHHHHHHhhcc-CCCceeeeeeEEE
Q 040908 441 IKAATNHFDVANKIGEGGFGPVYKGLLAD-G-----TLIAVKQLSAKS-KQGNREFVNEIGTISAL-QHPHLVKLYGCCI 512 (790)
Q Consensus 441 ~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~-g-----~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~ 512 (790)
.+...++|++.+.||+|+||.||+|.... + ..||+|.+.... ....+.+.+|+.+++++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 44456889999999999999999998532 2 479999987643 23456789999999999 8999999999999
Q ss_pred eCCeEEEEEEeccCCChhhhhcCCcc----------ccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe
Q 040908 513 EGNQLLLIYEYLENNSLARALFGPEE----------HRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL 582 (790)
Q Consensus 513 ~~~~~~lV~Ey~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl 582 (790)
..+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+.+ |+||||||+|||+
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEE
Confidence 99999999999999999999853211 1245799999999999999999999985 9999999999999
Q ss_pred cCCCCeEEeecCCccccCCCCcc-eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhh
Q 040908 583 DKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFY 660 (790)
Q Consensus 583 ~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~ 660 (790)
+.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+| |+.||.........
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~- 276 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF- 276 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH-
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH-
Confidence 99999999999999865443322 2234557889999999999999999999999999999999 99998754332211
Q ss_pred HHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040908 661 LLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGR 722 (790)
Q Consensus 661 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~ 722 (790)
.. ....+. .... +......+.+++..||+.||.+||++.||++.|+..
T Consensus 277 -~~----~~~~~~-----~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 277 -YK----LVKDGY-----QMAQ----PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp -HH----HHHHTC-----CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -HH----HHhcCC-----CCCC----CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 11 111111 0011 111235678899999999999999999999999864
No 141
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.3e-39 Score=346.88 Aligned_cols=270 Identities=21% Similarity=0.332 Sum_probs=209.2
Q ss_pred ccCCCCCCccHHHHHHHhcCccee-eeecccCcEEEEeeeec-CCcEEEEEEccccch--hcHHHHHHHHHHhhcc-CCC
Q 040908 428 GLDLQTGSFTLRQIKAATNHFDVA-NKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK--QGNREFVNEIGTISAL-QHP 502 (790)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~y~~~-~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l-~H~ 502 (790)
+.+...+...++..+...++|.+. +.||+|+||.||+|... +|+.||+|++..... .....+.+|+.++.++ +||
T Consensus 10 ~~~~~~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~ 89 (327)
T 3lm5_A 10 GVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP 89 (327)
T ss_dssp ------CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCT
T ss_pred cccccchhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCC
Confidence 344445556667777788889888 89999999999999865 689999999875432 3357889999999999 569
Q ss_pred ceeeeeeEEEeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe
Q 040908 503 HLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL 582 (790)
Q Consensus 503 niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl 582 (790)
||+++++++...+..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||+
T Consensus 90 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~ 164 (327)
T 3lm5_A 90 RVINLHEVYENTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILL 164 (327)
T ss_dssp TBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEE
Confidence 9999999999999999999999999999998533 2356899999999999999999999985 9999999999999
Q ss_pred cC---CCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchh
Q 040908 583 DK---DLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKF 659 (790)
Q Consensus 583 ~~---~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~ 659 (790)
+. ++.+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..
T Consensus 165 ~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~ 242 (327)
T 3lm5_A 165 SSIYPLGDIKIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242 (327)
T ss_dssp SCBTTBCCEEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred ecCCCCCcEEEeeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH
Confidence 98 78999999999986654322 23457999999999999999999999999999999999999999765432211
Q ss_pred hHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 660 YLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 660 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
. ........ ............+.+++..|++.||.+|||+.|+++
T Consensus 243 ~-----~i~~~~~~--------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 243 L-----NISQVNVD--------YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp H-----HHHHTCCC--------CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred H-----HHHhcccc--------cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 1 00000000 011111123356788999999999999999999865
No 142
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.2e-39 Score=339.21 Aligned_cols=245 Identities=26% Similarity=0.397 Sum_probs=179.4
Q ss_pred cCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
++|++.+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999985 468999999986542 233567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+ +++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 93 e~~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 6788888743 246899999999999999999999985 99999999999999999999999999986544
Q ss_pred CCcceeeccccCCCcccHHHhhcCCC-CChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHL-TDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
... .....||+.|+|||.+.+..+ +.++|||||||++|||++|+.||......... ... ..+..
T Consensus 165 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~~-~~~~~------ 229 (275)
T 2eue_A 165 GNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF------KNI-SNGVY------ 229 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHH-HHTCC------
T ss_pred ccc--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH------HHH-HhCCC------
Confidence 322 234569999999999987765 78999999999999999999999754322111 111 11110
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.... .....+.+++.+|++.||.+|||+.|+++
T Consensus 230 ~~~~----~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 230 TLPK----FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCCT----TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCc----cCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 1111 22345788999999999999999999975
No 143
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=355.26 Aligned_cols=263 Identities=14% Similarity=0.168 Sum_probs=205.2
Q ss_pred hcCcceeeeecccCcEEEEeeeecC---------CcEEEEEEccccchhcHHHHHHHHHHhhccCCCceee---------
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLAD---------GTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVK--------- 506 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~---------g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~--------- 506 (790)
.++|++.+.||+|+||.||+|.... ++.||+|++... ..+.+|+.++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999999653 789999998643 46789999999999999988
Q ss_pred ------eeeEEEe-CCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCc
Q 040908 507 ------LYGCCIE-GNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATN 579 (790)
Q Consensus 507 ------l~g~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~N 579 (790)
+++++.. .+..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~N 189 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAEN 189 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGG
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHH
Confidence 6777776 67899999999 999999995321 357999999999999999999999985 9999999999
Q ss_pred EEecCCC--CeEEeecCCccccCCCCcc------eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCc
Q 040908 580 VLLDKDL--NPKISDFGLAKLDEEDNTH------ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIM 651 (790)
Q Consensus 580 ILl~~~~--~~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~ 651 (790)
||++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 8999999999865432211 1233579999999999999999999999999999999999999997
Q ss_pred cccccchhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 652 CKTKEEKFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 652 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
....... .+........ .....+.+.... .......+.+++..||+.||.+||++.+|+++|+....
T Consensus 270 ~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 336 (352)
T 2jii_A 270 NCLPNTE-DIMKQKQKFV--DKPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQ 336 (352)
T ss_dssp GGTTCHH-HHHHHHHHHH--HSCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred cCCcCHH-HHHHHHHhcc--CChhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHH
Confidence 6542221 1111111111 111222221111 00123568889999999999999999999999987654
No 144
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-38 Score=359.49 Aligned_cols=251 Identities=24% Similarity=0.399 Sum_probs=205.8
Q ss_pred cCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
++|.+.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 67999999999999999999965 78999999996542 223467899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 96 E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999942 346899999999999999999999985 99999999999999999999999999987654
Q ss_pred CCcceeeccccCCCcccHHHhhcCCC-CChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHL-TDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
.. ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......... ... ..+..
T Consensus 169 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~------~~i-~~~~~------ 233 (476)
T 2y94_A 169 GE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLF------KKI-CDGIF------ 233 (476)
T ss_dssp TC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHH------HHH-HTTCC------
T ss_pred cc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHH------HHH-hcCCc------
Confidence 32 2234679999999999988765 67999999999999999999999754332211 111 11110
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcC
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS--MLEGR 722 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~--~L~~~ 722 (790)
.... .....+.+++..|++.||.+|||+.|+++ .+...
T Consensus 234 ~~p~----~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 234 YTPQ----YLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp CCCT----TCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred CCCc----cCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 0111 12346788999999999999999999987 55543
No 145
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.6e-39 Score=348.01 Aligned_cols=258 Identities=28% Similarity=0.418 Sum_probs=203.6
Q ss_pred cCcceeeeecccCcEEEEeeeec-CCcE--EEEEEcccc-chhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA-DGTL--IAVKQLSAK-SKQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~-~g~~--vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 520 (790)
++|++.+.||+|+||.||+|... +|.. ||+|.+... .....+.+.+|+.+++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 68899999999999999999954 5654 499988653 233456789999999999 999999999999999999999
Q ss_pred EEeccCCChhhhhcCCc------------cccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCe
Q 040908 521 YEYLENNSLARALFGPE------------EHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNP 588 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~ 588 (790)
|||+++|+|.+++.... .....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence 99999999999996443 22347899999999999999999999985 9999999999999999999
Q ss_pred EEeecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHH
Q 040908 589 KISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALL 667 (790)
Q Consensus 589 kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~ 667 (790)
||+|||+++...... ......+++.|+|||++.+..++.++|||||||++|||+| |+.||......+.. ..
T Consensus 182 kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~------~~ 253 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY------EK 253 (327)
T ss_dssp EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH------HH
T ss_pred EEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHH------HH
Confidence 999999997433211 1223457889999999998889999999999999999998 99999754322111 11
Q ss_pred HHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 668 LKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 668 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
...+ ..... +......+.+++.+||+.+|.+||++.|+++.|+....
T Consensus 254 -~~~~-----~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 254 -LPQG-----YRLEK----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp -GGGT-----CCCCC----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -hhcC-----CCCCC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111 11111 11233568899999999999999999999999987554
No 146
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.2e-38 Score=343.06 Aligned_cols=266 Identities=25% Similarity=0.416 Sum_probs=200.4
Q ss_pred HHHHHHhcCcceeeeecccCcEEEEeeeec----CCcEEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEE
Q 040908 439 RQIKAATNHFDVANKIGEGGFGPVYKGLLA----DGTLIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCI 512 (790)
Q Consensus 439 ~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~----~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 512 (790)
.++....++|.+.+.||+|+||.||+|... .+..||+|++... .....+.+.+|+.++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 344445678999999999999999999854 3458999998754 2334567999999999999999999999998
Q ss_pred eCC-----eEEEEEEeccCCChhhhhcCCc--cccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCC
Q 040908 513 EGN-----QLLLIYEYLENNSLARALFGPE--EHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKD 585 (790)
Q Consensus 513 ~~~-----~~~lV~Ey~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~ 585 (790)
+.+ ..++||||+++|+|.+++.... .....+++..++.++.|+++||+|||+.+ |+||||||+|||++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCC
Confidence 755 3599999999999999984221 23356999999999999999999999985 9999999999999999
Q ss_pred CCeEEeecCCccccCCCCc-ceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHH
Q 040908 586 LNPKISDFGLAKLDEEDNT-HISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLD 663 (790)
Q Consensus 586 ~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~ 663 (790)
+.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......... .
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~---~ 260 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY---D 260 (313)
T ss_dssp SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH---H
T ss_pred CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH---H
Confidence 9999999999986543322 12233457889999999999999999999999999999999 88888654432211 1
Q ss_pred HHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 664 WALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 664 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
... .+.. + ..+......+.+++..||+.+|.+||++.++++.|+...
T Consensus 261 ---~~~-~~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 261 ---YLL-HGHR-----L----KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp ---HHH-TTCC-----C----CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHH-cCCC-----C----CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111 1111 1 111223356889999999999999999999999998754
No 147
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.1e-38 Score=339.87 Aligned_cols=256 Identities=28% Similarity=0.391 Sum_probs=204.1
Q ss_pred HhcCcceee-eecccCcEEEEeeee---cCCcEEEEEEccccch--hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeE
Q 040908 444 ATNHFDVAN-KIGEGGFGPVYKGLL---ADGTLIAVKQLSAKSK--QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQL 517 (790)
Q Consensus 444 ~~~~y~~~~-~LG~G~fG~Vy~g~~---~~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 517 (790)
..++|++.+ .||+|+||.||+|.+ ..++.||||++..... ...+++.+|+.++++++||||+++++++ ..+..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 356788888 999999999999964 3468899999875432 2356799999999999999999999999 56778
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 93 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 999999999999999942 346899999999999999999999985 9999999999999999999999999998
Q ss_pred ccCCCCccee--eccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCc
Q 040908 598 LDEEDNTHIS--TRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNL 674 (790)
Q Consensus 598 ~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 674 (790)
.......... ....+|+.|+|||++.+..++.++||||||+++|||+| |+.||......+. .. ....+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~~----~~~~~~~ 238 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV---TA----MLEKGER 238 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH---HH----HHHTTCC
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH---HH----HHHcCCC
Confidence 7654433222 22446789999999998889999999999999999999 9999975433221 11 1111111
Q ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 675 MELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 675 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
+ ..+......+.+++..||+.||.+||++.++++.|+...
T Consensus 239 -----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 239 -----M----GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp -----C----CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -----C----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 112223456889999999999999999999999998754
No 148
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.4e-39 Score=350.80 Aligned_cols=254 Identities=22% Similarity=0.330 Sum_probs=179.7
Q ss_pred Cccee---eeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccC-CCceeeeeeEEEeCCeEEEEE
Q 040908 447 HFDVA---NKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQ-HPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 447 ~y~~~---~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~ 521 (790)
+|++. +.||+|+||.||+|... +|+.||||++... ....+.+|+.++..+. ||||+++++++.+.+..++||
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 85 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVM 85 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEE
Confidence 45543 78999999999999964 6899999998543 3456788999999997 999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCC---CeEEeecCCccc
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL---NPKISDFGLAKL 598 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~---~~kl~DFGla~~ 598 (790)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++.
T Consensus 86 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 86 ELLNGGELFERIKK----KKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp CCCCSCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred EccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 99999999999942 356999999999999999999999985 99999999999998765 799999999986
Q ss_pred cCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccccc
Q 040908 599 DEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELV 678 (790)
Q Consensus 599 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 678 (790)
....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....................+..
T Consensus 159 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~---- 233 (325)
T 3kn6_A 159 KPPDNQP-LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF---- 233 (325)
T ss_dssp CCC-----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCC----
T ss_pred cCCCCCc-ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCC----
Confidence 6543322 23456899999999999999999999999999999999999999754321110000001111111111
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 679 DPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 679 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
............++.+++..|++.||.+|||+.|+++
T Consensus 234 --~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 234 --SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp --CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred --CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 0000001123457889999999999999999999864
No 149
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.6e-39 Score=338.83 Aligned_cols=249 Identities=26% Similarity=0.398 Sum_probs=183.0
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 36799999999999999999995 578999999986542 22346789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++++|.+++.. ....+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EECCTTEEHHHHHHT---CSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 999999999999943 2356899999999999999999999985 9999999999999999999999999998654
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
.... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......... ......
T Consensus 164 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---------------~~~~~~ 227 (278)
T 3cok_A 164 MPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL---------------NKVVLA 227 (278)
T ss_dssp -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CCSS
T ss_pred CCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH---------------HHHhhc
Confidence 3222 123356899999999999888999999999999999999999999754322211 000000
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. ..+.....++.+++.+|++.||.+||++.++++
T Consensus 228 ~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 228 DY--EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cc--CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 00 111123346788999999999999999999865
No 150
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=351.14 Aligned_cols=242 Identities=20% Similarity=0.315 Sum_probs=200.4
Q ss_pred HhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccch--------hcHHHHHHHHHHhhccCCCceeeeeeEEEeC
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSK--------QGNREFVNEIGTISALQHPHLVKLYGCCIEG 514 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 514 (790)
..++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 457899999999999999999984 5689999999875421 1234577899999999999999999999999
Q ss_pred CeEEEEEEeccCC-ChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeec
Q 040908 515 NQLLLIYEYLENN-SLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDF 593 (790)
Q Consensus 515 ~~~~lV~Ey~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DF 593 (790)
+..++||||+.+| +|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999877 99999842 346899999999999999999999985 999999999999999999999999
Q ss_pred CCccccCCCCcceeeccccCCCcccHHHhhcCCC-CChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhC
Q 040908 594 GLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHL-TDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQG 672 (790)
Q Consensus 594 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~ 672 (790)
|+++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 175 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------- 236 (335)
T 3dls_A 175 GSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------------- 236 (335)
T ss_dssp TTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------------
T ss_pred ccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----------------
Confidence 99987654432 234569999999999988776 78999999999999999999999642110
Q ss_pred CcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 673 NLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 673 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
......+ .. .....+.+++..||+.||.+|||+.|+++
T Consensus 237 -~~~~~~~--~~----~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 237 -VEAAIHP--PY----LVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp -TTTCCCC--SS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -HhhccCC--Cc----ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000110 11 12346788999999999999999999987
No 151
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.4e-38 Score=344.81 Aligned_cols=274 Identities=26% Similarity=0.359 Sum_probs=211.1
Q ss_pred CccHHHHHHHhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhc--cCCCceeeeeeEEE
Q 040908 435 SFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISA--LQHPHLVKLYGCCI 512 (790)
Q Consensus 435 ~~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~ 512 (790)
...+..-....++|++.+.||+|+||.||+|.. +|+.||||++... ....+.+|++++.. ++||||+++++++.
T Consensus 31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~ 106 (342)
T 1b6c_B 31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADN 106 (342)
T ss_dssp SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred CCceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence 344444556678999999999999999999998 5899999998643 34567888888877 79999999999998
Q ss_pred eCC----eEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcC-----CCcEEeccCCCCcEEec
Q 040908 513 EGN----QLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEES-----RLKIVHRDIKATNVLLD 583 (790)
Q Consensus 513 ~~~----~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~-----~~~iiHrDlk~~NILl~ 583 (790)
..+ ..++||||+++|+|.+++. ...+++..++.++.|++.||+|||... ..+|+||||||+|||++
T Consensus 107 ~~~~~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 107 KDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 181 (342)
T ss_dssp CCCSSCCCEEEEECCCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEEC
T ss_pred ccCCccceeEEEEeecCCCcHHHHHh-----ccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEEC
Confidence 776 7899999999999999993 246899999999999999999999310 12599999999999999
Q ss_pred CCCCeEEeecCCccccCCCCcc---eeeccccCCCcccHHHhhcCC------CCChhhHHHHHHHHHHHHhC--------
Q 040908 584 KDLNPKISDFGLAKLDEEDNTH---ISTRVAGTFGYMAPEYAMRGH------LTDKADVYSFGIVALEIVSG-------- 646 (790)
Q Consensus 584 ~~~~~kl~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~s~ksDV~S~Gvvl~elltG-------- 646 (790)
.++.+||+|||+++........ ......||+.|+|||++.+.. ++.++|||||||++|||+||
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 9999999999999866544322 123457999999999997652 33689999999999999999
Q ss_pred --CCCCccccccchhhHHHHHHHHHhhCCcccccCCCCCCCC-cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 647 --RSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLGSNV-DKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 647 --~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
+.||........ ....+...... ....+.+...+ ..+....+.+++.+||+.||.+|||+.||++.|+.+.
T Consensus 262 ~~~~p~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~ 335 (342)
T 1b6c_B 262 DYQLPYYDLVPSDP-SVEEMRKVVCE-----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335 (342)
T ss_dssp CCCCTTTTTSCSSC-CHHHHHHHHTT-----SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccccCccccCcCcc-cHHHHHHHHHH-----HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 677754322111 11111111111 11122222111 2356778999999999999999999999999998764
No 152
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.2e-38 Score=337.55 Aligned_cols=251 Identities=23% Similarity=0.344 Sum_probs=200.9
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccch------hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK------QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQL 517 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 517 (790)
.++|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.++++++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 367999999999999999999965 689999999865421 1357799999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCC----CeEEeec
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL----NPKISDF 593 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~----~~kl~DF 593 (790)
++||||+++++|.+++. ....+++..+..++.|++.||+|||+.+ ++||||||+||+++.++ .+||+||
T Consensus 84 ~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 84 VLILELVSGGELFDFLA----EKESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEeecCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEec
Confidence 99999999999999993 2356899999999999999999999985 99999999999998877 8999999
Q ss_pred CCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCC
Q 040908 594 GLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGN 673 (790)
Q Consensus 594 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 673 (790)
|+++....... .....||+.|+|||++....++.++||||||+++|||++|+.||......+.. ... ....
T Consensus 157 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----~~~--~~~~ 227 (283)
T 3bhy_A 157 GIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL-----TNI--SAVN 227 (283)
T ss_dssp TTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-----HHH--HTTC
T ss_pred ccceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHH-----HHh--Hhcc
Confidence 99986644322 23456999999999999999999999999999999999999999754332211 000 0000
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 674 LMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 674 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
. .............+.+++.+|++.||.+||++.|+++
T Consensus 228 ~------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 228 Y------DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp C------CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred c------CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 0 0000000112346788999999999999999999987
No 153
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.7e-39 Score=347.36 Aligned_cols=256 Identities=18% Similarity=0.262 Sum_probs=197.2
Q ss_pred hcCccee-eeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEEEEE
Q 040908 445 TNHFDVA-NKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 445 ~~~y~~~-~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 521 (790)
.+.|++. +.||+|+||.||+|.. .+++.||||++..........+.+|+.++.++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3578875 7899999999999984 47899999999766555667899999999885 7999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCC---eEEeecCCccc
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKISDFGLAKL 598 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~DFGla~~ 598 (790)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||+++.
T Consensus 91 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 91 EKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp ECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 99999999999942 356899999999999999999999985 999999999999998776 99999999975
Q ss_pred cCCCCc------ceeeccccCCCcccHHHhhc-----CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhH------
Q 040908 599 DEEDNT------HISTRVAGTFGYMAPEYAMR-----GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYL------ 661 (790)
Q Consensus 599 ~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l------ 661 (790)
...... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||......+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 243 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence 532211 11223569999999999875 5678999999999999999999999976432210000
Q ss_pred --HHHHHHHHhhCCcccccCCCCCCCCcH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 662 --LDWALLLKEQGNLMELVDPNLGSNVDK----EQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 662 --~~~~~~~~~~~~~~~~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..........+.. ..+. .....+.+++.+|++.||.+|||+.|+++
T Consensus 244 ~~~~~~~~~i~~~~~----------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 244 ACQNMLFESIQEGKY----------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHHCCC----------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hHHHHHHHHHhccCc----------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 0000000111110 1111 12346889999999999999999999977
No 154
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=348.81 Aligned_cols=254 Identities=15% Similarity=0.152 Sum_probs=202.6
Q ss_pred HHhcCcceeeeecccCcEEEEeee------ecCCcEEEEEEccccchhcHHHHHHHHHHhhccC---CCceeeeeeEEEe
Q 040908 443 AATNHFDVANKIGEGGFGPVYKGL------LADGTLIAVKQLSAKSKQGNREFVNEIGTISALQ---HPHLVKLYGCCIE 513 (790)
Q Consensus 443 ~~~~~y~~~~~LG~G~fG~Vy~g~------~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~ 513 (790)
...++|.+.+.||+|+||.||+|. ..+++.||||++.... ..++..|+.++.+++ |+||+++++++..
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 345789999999999999999994 4468899999996543 446777777777775 9999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhcCCcc-ccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC--------
Q 040908 514 GNQLLLIYEYLENNSLARALFGPEE-HRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK-------- 584 (790)
Q Consensus 514 ~~~~~lV~Ey~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~-------- 584 (790)
.+..++||||+++|+|.+++..... ....++|..+..|+.||+.||+|||+.+ |+||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCcccc
Confidence 9999999999999999999953211 2356999999999999999999999985 999999999999998
Q ss_pred ---CCCeEEeecCCccccCC-CCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhh
Q 040908 585 ---DLNPKISDFGLAKLDEE-DNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFY 660 (790)
Q Consensus 585 ---~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~ 660 (790)
++.+||+|||+|+.... ..........||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-- 293 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-- 293 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE--
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce--
Confidence 89999999999975432 222334557799999999999999999999999999999999999999864322110
Q ss_pred HHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHhcCc
Q 040908 661 LLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNR-PLMSSVVSMLEGRV 723 (790)
Q Consensus 661 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Pt~~ev~~~L~~~~ 723 (790)
.+......... .+.+.+++..|++.+|.+| |++.++.+.|+...
T Consensus 294 ----------------~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 294 ----------------KPEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp ----------------EECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred ----------------eechhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 01111111112 3455677889999999998 57888888887654
No 155
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=6.9e-39 Score=353.36 Aligned_cols=248 Identities=26% Similarity=0.358 Sum_probs=192.6
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHH-hhccCCCceeeeeeEEEeCCeEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGT-ISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+..|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 367999999999999999999965 57899999997643 2234456777776 577899999999999999999999
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 117 VLDYINGGELFYHLQ----RERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 999999999999993 2356889999999999999999999985 999999999999999999999999999854
Q ss_pred CCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccC
Q 040908 600 EEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVD 679 (790)
Q Consensus 600 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 679 (790)
..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .... ..+
T Consensus 190 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~-----~i~~--~~~----- 256 (373)
T 2r5t_A 190 IEHNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD-----NILN--KPL----- 256 (373)
T ss_dssp BCCCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHH-----HHHH--SCC-----
T ss_pred ccCCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH-----HHHh--ccc-----
Confidence 33222 2345679999999999999999999999999999999999999997544322111 1111 111
Q ss_pred CCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 680 PNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 680 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..... ....+.+++..|++.||.+||++.+.++
T Consensus 257 -~~~~~----~~~~~~~li~~lL~~dp~~R~~~~~~~~ 289 (373)
T 2r5t_A 257 -QLKPN----ITNSARHLLEGLLQKDRTKRLGAKDDFM 289 (373)
T ss_dssp -CCCSS----SCHHHHHHHHHHTCSSGGGSTTTTTTHH
T ss_pred -CCCCC----CCHHHHHHHHHHcccCHHhCCCCCCCHH
Confidence 11112 2346788999999999999999864333
No 156
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-39 Score=341.08 Aligned_cols=256 Identities=26% Similarity=0.367 Sum_probs=201.3
Q ss_pred CcceeeeecccCcEEEEeeeecC----CcEEEEEEccccch-hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeE-EEE
Q 040908 447 HFDVANKIGEGGFGPVYKGLLAD----GTLIAVKQLSAKSK-QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQL-LLI 520 (790)
Q Consensus 447 ~y~~~~~LG~G~fG~Vy~g~~~~----g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~-~lV 520 (790)
.|++.+.||+|+||.||+|...+ +..||+|++..... ...+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 45667999999999999998532 23799999875433 3456789999999999999999999999876655 999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+.+|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 999999999999953 2356899999999999999999999985 9999999999999999999999999998554
Q ss_pred CCC---cceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 601 EDN---THISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 601 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
... ........+|+.|+|||.+.+..++.++||||||+++|||++|..|+........ +... .. .+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~--~~~~---~~-~~~~--- 246 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD--LTHF---LA-QGRR--- 246 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG--HHHH---HH-TTCC---
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH--HHHH---hh-cCCC---
Confidence 322 1122345688999999999999999999999999999999996666543322211 1111 11 1110
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
.. .+......+.+++..|++.||.+|||+.++++.|+...
T Consensus 247 --~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 247 --LP----QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp --CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CC----CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 01 11122346888999999999999999999999998754
No 157
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.4e-38 Score=336.96 Aligned_cols=250 Identities=24% Similarity=0.389 Sum_probs=204.1
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEe---------
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIE--------- 513 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--------- 513 (790)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4567999999999999999999975 78999999986543 356789999999999999999998864
Q ss_pred -------CCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCC
Q 040908 514 -------GNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL 586 (790)
Q Consensus 514 -------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~ 586 (790)
....++||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETT
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCC
Confidence 44589999999999999999532 2357899999999999999999999985 99999999999999999
Q ss_pred CeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHH
Q 040908 587 NPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWAL 666 (790)
Q Consensus 587 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~ 666 (790)
.+||+|||+++....... .....||+.|+|||++.+..++.++||||||+++|||++|..|+.... .+..
T Consensus 160 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~~~~ 229 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS--------KFFT 229 (284)
T ss_dssp EEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH--------HHHH
T ss_pred CEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH--------HHHH
Confidence 999999999986654332 234569999999999999999999999999999999999998874211 1111
Q ss_pred HHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 040908 667 LLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVGV 725 (790)
Q Consensus 667 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~~ 725 (790)
. ...+. +...++ ..+.+++..||+.||.+||++.|+++.|+.....
T Consensus 230 ~-~~~~~--------~~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 230 D-LRDGI--------ISDIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp H-HHTTC--------CCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred H-hhccc--------ccccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 1 11111 112222 3567889999999999999999999999876543
No 158
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-39 Score=352.69 Aligned_cols=253 Identities=23% Similarity=0.326 Sum_probs=201.7
Q ss_pred hcCcceeeeecccCcEEEEeeee----cCCcEEEEEEccccc----hhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCC
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL----ADGTLIAVKQLSAKS----KQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGN 515 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~----~~g~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 515 (790)
.++|++.+.||+|+||.||+|.. .+|+.||||+++... ......+.+|+.++.++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999986 368999999987532 22345677899999999 6999999999999999
Q ss_pred eEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCC
Q 040908 516 QLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 595 (790)
Q Consensus 516 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGl 595 (790)
..++||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLS----QRERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCC
Confidence 9999999999999999994 2346899999999999999999999985 99999999999999999999999999
Q ss_pred ccccCCCCcceeeccccCCCcccHHHhhc--CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCC
Q 040908 596 AKLDEEDNTHISTRVAGTFGYMAPEYAMR--GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGN 673 (790)
Q Consensus 596 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 673 (790)
++..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ..........
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~-- 281 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ--AEISRRILKS-- 281 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH--HHHHHHHHHC--
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchH--HHHHHHHhcc--
Confidence 98654433333445679999999999985 34789999999999999999999999754332211 1111111110
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 040908 674 LMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRP-----LMSSVVS 717 (790)
Q Consensus 674 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~ev~~ 717 (790)
.+.. +......+.+++.+||+.||.+|| ++.|+++
T Consensus 282 -----~~~~----~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 282 -----EPPY----PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp -----CCCC----CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred -----CCCC----CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 1111 122334678899999999999999 8888876
No 159
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3e-39 Score=341.48 Aligned_cols=260 Identities=25% Similarity=0.390 Sum_probs=204.9
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEe--CCeEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIE--GNQLLL 519 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~l 519 (790)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.. .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999999964 68999999986542 3345678999999999999999999998864 568999
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcC--CCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEES--RLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~--~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
||||+++++|.+++.........+++..++.++.|++.||+|||+.+ ..+|+||||||+|||++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999644333456999999999999999999999974 1239999999999999999999999999998
Q ss_pred ccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 598 LDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 598 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ +.. . ...+...
T Consensus 165 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~---~-i~~~~~~-- 234 (279)
T 2w5a_A 165 ILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LAG---K-IREGKFR-- 234 (279)
T ss_dssp HC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH---H-HHHTCCC--
T ss_pred eeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH---HHH---H-Hhhcccc--
Confidence 6654322 1233568999999999999899999999999999999999999997543221 111 1 1112211
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEG 721 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~ 721 (790)
.+.. ....++.+++.+||+.||.+||++.|+++.+..
T Consensus 235 ---~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 235 ---RIPY----RYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp ---CCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ---cCCc----ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 1111 223567889999999999999999999886543
No 160
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.4e-39 Score=356.24 Aligned_cols=204 Identities=25% Similarity=0.450 Sum_probs=164.3
Q ss_pred HHhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEcccc--chhcHHHHHHHHHHhhccC-CCceeeeeeEEEeCC--e
Q 040908 443 AATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAK--SKQGNREFVNEIGTISALQ-HPHLVKLYGCCIEGN--Q 516 (790)
Q Consensus 443 ~~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~--~ 516 (790)
...++|++.+.||+|+||.||+|.. .+|+.||||++... .......+.+|+.++.++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3467899999999999999999985 46899999998643 2334567889999999997 999999999997544 7
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCc
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 596 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla 596 (790)
.++||||++ ++|.+++. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|
T Consensus 86 ~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIR-----ANILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp EEEEEECCS-EEHHHHHH-----HTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecccC-cCHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 899999998 58998883 246899999999999999999999985 999999999999999999999999999
Q ss_pred cccCCC--------------------CcceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccc
Q 040908 597 KLDEED--------------------NTHISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTK 655 (790)
Q Consensus 597 ~~~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~ 655 (790)
+..... .....+..+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 865321 1112344679999999999986 6789999999999999999999999976543
No 161
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.3e-38 Score=340.23 Aligned_cols=258 Identities=26% Similarity=0.372 Sum_probs=200.8
Q ss_pred hcCcceeeeecccCcEEEEeeeecC----CcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEe-CCeEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLAD----GTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIE-GNQLL 518 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~----g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~ 518 (790)
..+|++.+.||+|+||.||+|...+ ...||+|.+.... ....+.+.+|+.++++++||||++++++|.. ++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3468899999999999999998543 2368999987543 3345679999999999999999999999754 55789
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccc
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 598 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~ 598 (790)
+||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEeCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccc
Confidence 99999999999999943 2356899999999999999999999985 99999999999999999999999999986
Q ss_pred cCCCCc---ceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhC-CCCCccccccchhhHHHHHHHHHhhCCc
Q 040908 599 DEEDNT---HISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSG-RSNIMCKTKEEKFYLLDWALLLKEQGNL 674 (790)
Q Consensus 599 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG-~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 674 (790)
...... .......||+.|+|||.+.+..++.++||||||+++|||++| ..||......+.. .... .+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~------~~~~-~~~~ 250 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT------VYLL-QGRR 250 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHH------HHHH-TTCC
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHH------HHHh-cCCC
Confidence 543221 122345678899999999999999999999999999999995 4555433222211 1111 1110
Q ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 675 MELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 675 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
. .... .....+.+++..||+.+|.+||++.|+++.|+....
T Consensus 251 --~---~~~~----~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 251 --L---LQPE----YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp --C---CCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --C---CCCc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0 0111 123468889999999999999999999999987653
No 162
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.7e-38 Score=365.70 Aligned_cols=254 Identities=26% Similarity=0.320 Sum_probs=206.5
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.+|++++|||||++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3567999999999999999999964 68999999996542 3345678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
||||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++..
T Consensus 262 VmEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceec
Confidence 999999999999995432 245899999999999999999999985 999999999999999999999999999876
Q ss_pred CCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccC
Q 040908 600 EEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVD 679 (790)
Q Consensus 600 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 679 (790)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+ ..... ...
T Consensus 337 ~~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i--~~~i~-~~~------ 405 (576)
T 2acx_A 337 PEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV--ERLVK-EVP------ 405 (576)
T ss_dssp CTTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHH--HHHHH-HCC------
T ss_pred ccCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHH--HHHhh-ccc------
Confidence 54332 23457999999999999989999999999999999999999999765432111111 11111 110
Q ss_pred CCCCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 040908 680 PNLGSNVDKEQVRVMINVALLCADVSPTNRP-----LMSSVVS 717 (790)
Q Consensus 680 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~ev~~ 717 (790)
. .++.....++.+++..|++.||.+|| ++.||++
T Consensus 406 ~----~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 406 E----EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp C----CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred c----cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 1 11122235678899999999999999 7788874
No 163
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6.5e-39 Score=339.78 Aligned_cols=247 Identities=24% Similarity=0.385 Sum_probs=199.2
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEcccc--chhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAK--SKQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 519 (790)
..++|++.+.||+|+||.||+|... +++.||+|++... .......+.+|+..+.++ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3578999999999999999999965 7899999998753 233456788999999999 99999999999999999999
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC---------------
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK--------------- 584 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~--------------- 584 (790)
||||+++++|.+++.........+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCccccccccccc
Confidence 99999999999999543333356899999999999999999999985 999999999999984
Q ss_pred ----CCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcC-CCCChhhHHHHHHHHHHHHhCCCCCccccccchh
Q 040908 585 ----DLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRG-HLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKF 659 (790)
Q Consensus 585 ----~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~ 659 (790)
...+||+|||+++...... ...||+.|+|||++.+. .++.++|||||||++|||++|+.++.....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---- 236 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---- 236 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH----
T ss_pred ccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH----
Confidence 4479999999998665432 23589999999999875 566799999999999999999877643211
Q ss_pred hHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 660 YLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 660 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
+.. ...+.. +.+... ....+.+++..||+.||.+|||+.|+++
T Consensus 237 ----~~~--~~~~~~-----~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 237 ----WHE--IRQGRL-----PRIPQV----LSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ----HHH--HHTTCC-----CCCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----HHH--HHcCCC-----CCCCcc----cCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 111 111211 111222 2346788999999999999999999865
No 164
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=8.1e-39 Score=376.34 Aligned_cols=247 Identities=28% Similarity=0.394 Sum_probs=197.2
Q ss_pred eeecccCcEEEEeeeec---CCcEEEEEEccccch--hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEeccC
Q 040908 452 NKIGEGGFGPVYKGLLA---DGTLIAVKQLSAKSK--QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLEN 526 (790)
Q Consensus 452 ~~LG~G~fG~Vy~g~~~---~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 526 (790)
+.||+|+||.||+|.+. .++.||||+++.... ...++|.+|+.++++++|||||+++++|.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 467899999976433 335789999999999999999999999964 568899999999
Q ss_pred CChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCCcc-
Q 040908 527 NSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTH- 605 (790)
Q Consensus 527 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~- 605 (790)
|+|.+++. ....+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999993 2356899999999999999999999985 999999999999999999999999999876543321
Q ss_pred -eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccccCCCCC
Q 040908 606 -ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLG 683 (790)
Q Consensus 606 -~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 683 (790)
......+|+.|+|||++....++.++|||||||++|||++ |+.||......+... ....+..
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~-------~i~~~~~--------- 590 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------MLEKGER--------- 590 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH-------HHHTTCC---------
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-------HHHcCCC---------
Confidence 2233457889999999999999999999999999999998 999997654322111 1111111
Q ss_pred CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040908 684 SNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGR 722 (790)
Q Consensus 684 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~ 722 (790)
...+.....++.+++..||+.||.+||++.+|++.|+..
T Consensus 591 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 111223345788999999999999999999999999864
No 165
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.7e-38 Score=361.25 Aligned_cols=262 Identities=22% Similarity=0.269 Sum_probs=207.3
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccCC-CceeeeeeEEEeCCeEEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQH-PHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~E 522 (790)
.++|++.++||+|+||.||+|.. .+++.||||++..... ...+..|+++++.++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 47899999999999999999995 5689999998765432 2357889999999976 556666667778889999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe---cCCCCeEEeecCCcccc
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 599 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~DFGla~~~ 599 (790)
|+ +++|.+++.. ....+++..++.|+.||+.||+|||+.+ |+||||||+|||| +.++.+||+|||+++..
T Consensus 84 ~~-g~sL~~ll~~---~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 84 LL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp CC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred CC-CCCHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 99 9999999942 2356999999999999999999999985 9999999999999 68899999999999866
Q ss_pred CCCCcc------eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCC
Q 040908 600 EEDNTH------ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGN 673 (790)
Q Consensus 600 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 673 (790)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......................
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATS 236 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSC
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccccc
Confidence 543321 12256799999999999999999999999999999999999999986544333222222222111111
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 674 LMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 674 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
+..+. .. ...++.+++..||+.+|.+||++.+|+++|+....
T Consensus 237 ~~~l~-----~~----~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 237 IEALC-----RG----YPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HHHHH-----TT----SCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHh-----cC----CcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 11111 11 13468899999999999999999999999987643
No 166
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.2e-38 Score=347.78 Aligned_cols=252 Identities=20% Similarity=0.334 Sum_probs=199.5
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 521 (790)
..++|++.+.||+|+||.||+|... +|+.||||++..... .+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4578999999999999999999964 688999999865432 234688888888 7999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCC----CCeEEeecCCcc
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKD----LNPKISDFGLAK 597 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~----~~~kl~DFGla~ 597 (790)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||+.++ +.+||+|||+++
T Consensus 96 E~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 96 ELMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp CCCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 99999999999843 246899999999999999999999985 9999999999998543 349999999998
Q ss_pred ccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 598 LDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 598 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..........+... ...+...
T Consensus 169 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~----i~~~~~~-- 241 (342)
T 2qr7_A 169 QLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILAR----IGSGKFS-- 241 (342)
T ss_dssp ECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHH----HHHCCCC--
T ss_pred cCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHH----HccCCcc--
Confidence 6654332 22346789999999999888889999999999999999999999975432222211111 1112111
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
............+.+++..|++.||.+||++.|+++
T Consensus 242 ----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 242 ----LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp ----CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ----cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111123356788999999999999999999986
No 167
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=4.9e-39 Score=340.00 Aligned_cols=251 Identities=27% Similarity=0.402 Sum_probs=197.5
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeC-CeEEEEEEe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEG-NQLLLIYEY 523 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lV~Ey 523 (790)
.++|++.+.||+|+||.||+|... |+.||||++.... ..+.+.+|+.++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 468999999999999999999874 8899999997542 456789999999999999999999997654 468999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCC
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 603 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~ 603 (790)
+++++|.+++... ....+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 97 MAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp CTTEEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred CCCCCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 9999999999422 1234889999999999999999999985 9999999999999999999999999998544321
Q ss_pred cceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCcccccCCCC
Q 040908 604 THISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNL 682 (790)
Q Consensus 604 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 682 (790)
....+++.|+|||.+.+..++.++||||||+++|||+| |+.||......+.. ... ..+. ....
T Consensus 172 ----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~------~~~-~~~~-----~~~~ 235 (278)
T 1byg_A 172 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV------PRV-EKGY-----KMDA 235 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH------HHH-TTTC-----CCCC
T ss_pred ----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH------HHH-hcCC-----CCCC
Confidence 22357889999999999999999999999999999998 99999754332211 111 1110 1111
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 683 GSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 683 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
+......+.+++..||+.||.+||++.|+++.|+...
T Consensus 236 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 236 ----PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 1223456888999999999999999999999998753
No 168
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.6e-38 Score=335.23 Aligned_cols=252 Identities=27% Similarity=0.402 Sum_probs=203.5
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467999999999999999999965 68999999986543 3345678999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCC
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 602 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 602 (790)
|+++++|.+++.. ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 86 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 9999999999842 346899999999999999999999985 999999999999999999999999999865432
Q ss_pred Cc-ceeeccccCCCcccHHHhhcCCC-CChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 603 NT-HISTRVAGTFGYMAPEYAMRGHL-TDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 603 ~~-~~~~~~~gt~~y~aPE~~~~~~~-s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
.. .......||+.|+|||++.+..+ +.++||||||+++|||++|+.||........ ....|.. ... ...
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~----~~~---~~~- 229 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWKE----KKT---YLN- 229 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHHHT----TCT---TST-
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHhhh----ccc---ccC-
Confidence 21 12234678999999999987665 6799999999999999999999976543221 1111111 000 000
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
........+.+++..|++.||.+|||+.|+++
T Consensus 230 -----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 230 -----PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -----TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 01122346788999999999999999999865
No 169
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.8e-39 Score=341.76 Aligned_cols=255 Identities=22% Similarity=0.326 Sum_probs=187.6
Q ss_pred HhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccch-h-cHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSK-Q-GNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~-~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
..++|++.+.||+|+||.||+|.. .+|+.||+|++..... . ..+.+.++...++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 357899999999999999999995 5789999999875422 2 223345555568888999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||++ |+|.+++.........+++..+..++.|++.||+|||+.. +|+||||||+|||++.++.+||+|||+++...
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99998 5888887443334567999999999999999999999972 39999999999999999999999999998664
Q ss_pred CCCcceeeccccCCCcccHHHh----hcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 601 EDNTHISTRVAGTFGYMAPEYA----MRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
.... .....||+.|+|||++ .+..++.++|||||||++|||+||+.||........ ..... .... ...
T Consensus 162 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~-~~~~-~~~ 233 (290)
T 3fme_A 162 DDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ----QLKQV-VEEP-SPQ 233 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH----HHHHH-HHSC-CCC
T ss_pred cccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH----HHHHH-hccC-CCC
Confidence 4322 2334699999999996 456788999999999999999999999964322111 11111 1111 111
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. .......+.+++..|++.||.+|||+.|+++
T Consensus 234 -----~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 -----LP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -----CC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -----cc---cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 10 1122346788999999999999999999976
No 170
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.5e-38 Score=359.22 Aligned_cols=261 Identities=20% Similarity=0.283 Sum_probs=195.1
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEeC------C
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIEG------N 515 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~ 515 (790)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 57899999999999999999985 46899999999754 333456788999999999999999999999654 4
Q ss_pred eEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCC
Q 040908 516 QLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 595 (790)
Q Consensus 516 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGl 595 (790)
..++||||++++ |.+.+. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~~-l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSEE-HHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCCC-HHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEe
Confidence 679999999865 666662 24899999999999999999999985 99999999999999999999999999
Q ss_pred ccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHH-----------
Q 040908 596 AKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDW----------- 664 (790)
Q Consensus 596 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~----------- 664 (790)
|+...... ..+...||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.-
T Consensus 211 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 211 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp C-----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred eeecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 98664432 23456799999999999999999999999999999999999999976543221111000
Q ss_pred -----HHHHHhh-CC-----cccccCCCC-CC--CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 665 -----ALLLKEQ-GN-----LMELVDPNL-GS--NVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 665 -----~~~~~~~-~~-----~~~~~d~~l-~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
....... .. +.......+ .. ........++.+++.+||+.||.+|||+.|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000 00 000000000 00 011122567899999999999999999999986
No 171
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.3e-38 Score=337.70 Aligned_cols=248 Identities=24% Similarity=0.364 Sum_probs=203.9
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467999999999999999999965 57899999986542 23456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++++|.+++. ....+++..+..++.|+++||+|||+.+ ++||||||+|||++.++.+||+|||+++...
T Consensus 94 ~e~~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999883 2356899999999999999999999985 9999999999999999999999999998664
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.. ... .... .
T Consensus 167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-----~~~--~~~~------~ 232 (294)
T 2rku_A 167 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY-----LRI--KKNE------Y 232 (294)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-----HHH--HTTC------C
T ss_pred cCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-----HHH--hhcc------C
Confidence 3322 223456999999999999888999999999999999999999999754332211 111 1111 0
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.+... ....+.+++.+|++.||.+||++.|+++
T Consensus 233 ~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 233 SIPKH----INPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp CCCTT----SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCccc----cCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 11112 2346788999999999999999999876
No 172
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3e-38 Score=362.73 Aligned_cols=251 Identities=24% Similarity=0.342 Sum_probs=204.4
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999964 68999999996542 23456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++|+|.+++.........+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999999654433457999999999999999999999985 9999999999999999999999999998765
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......... ...
T Consensus 341 ~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~--~~~~~~i~~-~~~------ 410 (543)
T 3c4z_A 341 AGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--KELKQRVLE-QAV------ 410 (543)
T ss_dssp TTCCC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH--HHHHHHHHH-CCC------
T ss_pred CCCcc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH--HHHHHHHhh-ccc------
Confidence 43322 23457999999999999999999999999999999999999999765322111 111111111 110
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLM 712 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 712 (790)
.++......+.+++..|++.||.+||++
T Consensus 411 ----~~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 411 ----TYPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp ----CCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred ----CCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 1112233567889999999999999976
No 173
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.9e-38 Score=338.38 Aligned_cols=248 Identities=30% Similarity=0.454 Sum_probs=205.0
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
.+.|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 46799999999999999999985 468899999986543 3445789999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCC
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 602 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 602 (790)
|+++++|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 101 ~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 101 YLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp CCTTEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred eCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 999999999983 246899999999999999999999985 999999999999999999999999999865443
Q ss_pred CcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCCC
Q 040908 603 NTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNL 682 (790)
Q Consensus 603 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 682 (790)
.. ......||+.|+|||++.+..++.++||||||+++|||++|+.||......... . . ..... .+.+
T Consensus 173 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~---~-~~~~~-----~~~~ 239 (303)
T 3a7i_A 173 QI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL---F---L-IPKNN-----PPTL 239 (303)
T ss_dssp BC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---H---H-HHHSC-----CCCC
T ss_pred cc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH---H---H-hhcCC-----CCCC
Confidence 22 223456899999999999999999999999999999999999999654322111 1 1 11111 1112
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 683 GSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 683 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
...+ ...+.+++..||+.||.+|||+.|+++
T Consensus 240 ~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 240 EGNY----SKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp CSSC----CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cccc----CHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 2222 345788999999999999999999986
No 174
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1e-38 Score=350.71 Aligned_cols=264 Identities=22% Similarity=0.356 Sum_probs=202.4
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 467999999999999999999965 68999999987642 3345678999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCC
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 602 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 602 (790)
|+++++|.+++. ....+++..+..++.|++.||+|||+.. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~----~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 112 HMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred CCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 999999999993 2346899999999999999999999852 3999999999999999999999999999754321
Q ss_pred CcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHH---------HHHh---
Q 040908 603 NTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWAL---------LLKE--- 670 (790)
Q Consensus 603 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~---------~~~~--- 670 (790)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+......... ....
T Consensus 186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 186 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp ---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred ---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 1234579999999999999999999999999999999999999997544322111100000 0000
Q ss_pred -----------hCCcccc----cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 671 -----------QGNLMEL----VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 671 -----------~~~~~~~----~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.....+. ................+.+++..||+.||.+|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000000 0000000001112346889999999999999999999976
No 175
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=350.00 Aligned_cols=261 Identities=21% Similarity=0.360 Sum_probs=194.1
Q ss_pred cCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhc-HHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEe
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQG-NREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEY 523 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 523 (790)
++|++.+.||+|+||.||+|... +++.||+|++....... ...+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57999999999999999999965 68999999986543221 22456799999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCC
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 603 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~ 603 (790)
++ |+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 98 589888842 2346899999999999999999999985 9999999999999999999999999998654332
Q ss_pred cceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhh---CCcccccC
Q 040908 604 THISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQ---GNLMELVD 679 (790)
Q Consensus 604 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~d 679 (790)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+ ...... ........
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i---~~~~~~~~~~~~~~~~~ 230 (324)
T 3mtl_A 155 K-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFI---FRILGTPTEETWPGILS 230 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHHHCCCCTTTSTTGGG
T ss_pred c-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HHHhCCCChHhchhhhc
Confidence 2 2234568999999999876 56899999999999999999999999765433221111 110000 00000000
Q ss_pred ---------CCCCCCC----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 680 ---------PNLGSNV----DKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 680 ---------~~l~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
+...... ......++.+++..|++.||.+|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000 0112346789999999999999999999987
No 176
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.3e-38 Score=334.74 Aligned_cols=245 Identities=22% Similarity=0.365 Sum_probs=202.7
Q ss_pred cCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 67999999999999999999965 57899999986542 223467899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 94 EFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp CCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 99999999999842 246899999999999999999999885 99999999999999999999999999976543
Q ss_pred CCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPN 681 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 681 (790)
.. .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+.. .... .. +..
T Consensus 167 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~~~-~~------~~~ 230 (284)
T 2vgo_A 167 LR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH------RRIV-NV------DLK 230 (284)
T ss_dssp SC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH------HHHH-TT------CCC
T ss_pred cc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHH------HHHh-cc------ccC
Confidence 22 23456899999999999989999999999999999999999999754322211 0101 11 111
Q ss_pred CCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 682 LGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 682 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
... .....+.+++..|++.||.+||++.|+++
T Consensus 231 ~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 231 FPP----FLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp CCT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCC----cCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 111 22346788999999999999999999976
No 177
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.3e-38 Score=350.03 Aligned_cols=269 Identities=22% Similarity=0.334 Sum_probs=199.9
Q ss_pred cHHHHHHHhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchh-----------cHHHHHHHHHHhhccCCCcee
Q 040908 437 TLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQ-----------GNREFVNEIGTISALQHPHLV 505 (790)
Q Consensus 437 ~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv 505 (790)
.+.++....++|++.+.||+|+||.||+|...+|+.||||++...... ..+.+.+|+.++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 456788889999999999999999999999888999999998653221 136789999999999999999
Q ss_pred eeeeEEEeC-----CeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcE
Q 040908 506 KLYGCCIEG-----NQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNV 580 (790)
Q Consensus 506 ~l~g~~~~~-----~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NI 580 (790)
++++++... ...++||||+. |+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NI 165 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNI 165 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHE
Confidence 999998543 36899999998 688888843 2346899999999999999999999985 99999999999
Q ss_pred EecCCCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchh
Q 040908 581 LLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKF 659 (790)
Q Consensus 581 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~ 659 (790)
|++.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+..
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 243 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243 (362)
T ss_dssp EECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred EEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99999999999999998544332 2234568999999999887 67899999999999999999999999765432211
Q ss_pred hHHHHHHHHHhhCC-----------cccccCCCCC---CC----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 660 YLLDWALLLKEQGN-----------LMELVDPNLG---SN----VDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 660 ~l~~~~~~~~~~~~-----------~~~~~d~~l~---~~----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..+ ... ..... ..+.+..... .. ........+.+++..|++.||.+|||+.|+++
T Consensus 244 ~~i--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 244 NKI--VEV-VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHH--HHH-HCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHH--HHH-cCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 100 000 00000 0000000000 00 01112346889999999999999999999986
No 178
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1e-38 Score=346.46 Aligned_cols=263 Identities=20% Similarity=0.308 Sum_probs=192.9
Q ss_pred HhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchh--cHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQ--GNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
..++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 457899999999999999999984 47899999999754322 245678999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEec-----CCCCeEEeecCC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLD-----KDLNPKISDFGL 595 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-----~~~~~kl~DFGl 595 (790)
|||+++ +|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++ +++.+||+|||+
T Consensus 112 ~e~~~~-~L~~~~~----~~~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAEN-DLKKYMD----KNPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCSE-EHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCCC-CHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999984 9999983 2346899999999999999999999985 99999999999994 455699999999
Q ss_pred ccccCCCCcceeeccccCCCcccHHHhhcC-CCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhh--C
Q 040908 596 AKLDEEDNTHISTRVAGTFGYMAPEYAMRG-HLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQ--G 672 (790)
Q Consensus 596 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--~ 672 (790)
++....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+.. .......... .
T Consensus 184 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~~~ 260 (329)
T 3gbz_A 184 ARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQL--FKIFEVLGLPDDT 260 (329)
T ss_dssp HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCTT
T ss_pred ccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHH--HHHHHHhCCCchh
Confidence 986643322 22345689999999999874 4899999999999999999999999765432211 1111110000 0
Q ss_pred Ccc------ccc--CCCCCCCCcH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 673 NLM------ELV--DPNLGSNVDK-----EQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 673 ~~~------~~~--d~~l~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
... ... .+........ ....++.+++..|++.||.+|||+.|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 261 TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000 000 0000010000 12356789999999999999999999876
No 179
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=6.3e-39 Score=347.65 Aligned_cols=262 Identities=26% Similarity=0.390 Sum_probs=204.1
Q ss_pred HhcCcceeeeecccCcEEEEeeee------cCCcEEEEEEcccc-chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCe
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL------ADGTLIAVKQLSAK-SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQ 516 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~------~~g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 516 (790)
..++|++.+.||+|+||.||+|.+ .++..||||++... .......+.+|+.++++++||||+++++++...+.
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 357899999999999999999984 24678999999654 33445678999999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhcCCcc---ccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC---CCCeEE
Q 040908 517 LLLIYEYLENNSLARALFGPEE---HRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKI 590 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl 590 (790)
.++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+.+ |+||||||+|||++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999953321 1245899999999999999999999985 999999999999984 456999
Q ss_pred eecCCccccCCCCc-ceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHH
Q 040908 591 SDFGLAKLDEEDNT-HISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLL 668 (790)
Q Consensus 591 ~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~ 668 (790)
+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||+| |+.||......+. ..+ .
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~~~---~ 258 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV---LEF---V 258 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH---HHH---H
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHH---HHH---H
Confidence 99999975433221 22234568999999999999999999999999999999998 9999865432211 111 1
Q ss_pred HhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 669 KEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 669 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
..+.. +.. +......+.+++..||+.||.+||++.|+++.|+....
T Consensus 259 -~~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 259 -TSGGR-----MDP----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp -HTTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -hcCCC-----CCC----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 11111 111 11223467889999999999999999999999986543
No 180
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.1e-39 Score=357.33 Aligned_cols=243 Identities=14% Similarity=0.120 Sum_probs=189.1
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEcccc---chhcHHHHHHHH---HHhhccCCCceeeee-------eE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAK---SKQGNREFVNEI---GTISALQHPHLVKLY-------GC 510 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~---~~~~~~~~~~E~---~~l~~l~H~niv~l~-------g~ 510 (790)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+ .++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46799999999999999999995 56899999998743 333457789999 555666899999998 55
Q ss_pred EEeCC-----------------eEEEEEEeccCCChhhhhcCCcc---ccCCCChhhHHHHHHHHHHHHHHhhhcCCCcE
Q 040908 511 CIEGN-----------------QLLLIYEYLENNSLARALFGPEE---HRLKLDWPTRHNICIGIARGLAYLHEESRLKI 570 (790)
Q Consensus 511 ~~~~~-----------------~~~lV~Ey~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~i 570 (790)
+...+ ..++||||+ +|+|.+++..... ....++|..++.|+.||+.||+|||+.+ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 55443 278999999 6899999943211 1123446888899999999999999985 9
Q ss_pred EeccCCCCcEEecCCCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcC-----------CCCChhhHHHHHHH
Q 040908 571 VHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRG-----------HLTDKADVYSFGIV 639 (790)
Q Consensus 571 iHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~ksDV~S~Gvv 639 (790)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999985332 2344567 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 640 ALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 640 l~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
+|||+||+.||......... ..+.. .. ..+ ...+.+++..||+.||.+||++.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~~~---------------~~~~~-~~-~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGGS---------------EWIFR-SC-KNI----PQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CCS---------------GGGGS-SC-CCC----CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccch---------------hhhhh-hc-cCC----CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999999654322111 11111 00 122 346788999999999999999999976
No 181
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.8e-38 Score=352.25 Aligned_cols=252 Identities=21% Similarity=0.250 Sum_probs=190.3
Q ss_pred hcCccee-eeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhc-cCCCceeeeeeEEEe----CCeE
Q 040908 445 TNHFDVA-NKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISA-LQHPHLVKLYGCCIE----GNQL 517 (790)
Q Consensus 445 ~~~y~~~-~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~----~~~~ 517 (790)
.++|.+. +.||+|+||.||+|... +|+.||||++.. ...+.+|+.++.+ .+||||+++++++.. .+..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3567776 78999999999999964 688999999853 2456788888754 489999999999875 5678
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC---CCCeEEeecC
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKISDFG 594 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~DFG 594 (790)
++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecc
Confidence 99999999999999995432 246899999999999999999999985 999999999999998 7899999999
Q ss_pred CccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCc
Q 040908 595 LAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNL 674 (790)
Q Consensus 595 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 674 (790)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........... ... ....+..
T Consensus 210 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~-~i~~~~~ 284 (400)
T 1nxk_A 210 FAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKT-RIRMGQY 284 (400)
T ss_dssp TCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS--HHH-HHHHTCC
T ss_pred cccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH--HHH-HHHcCcc
Confidence 998654332 22346789999999999999999999999999999999999999975433221000 000 0111111
Q ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 675 MELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 675 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
. .-.+. ......++.+++..||+.||.+|||+.|+++
T Consensus 285 ~-~~~~~-----~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 285 E-FPNPE-----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp C-CCTTT-----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred c-CCCcc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 00000 0122356789999999999999999999987
No 182
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.8e-38 Score=343.88 Aligned_cols=248 Identities=24% Similarity=0.370 Sum_probs=204.0
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|.+.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 367999999999999999999965 57899999986542 23456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++++|.+++. ....+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 120 ~e~~~~~~L~~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999883 2356899999999999999999999985 9999999999999999999999999998664
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .... ....
T Consensus 193 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~--~~~~------ 258 (335)
T 2owb_A 193 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY-----LRIK--KNEY------ 258 (335)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-----HHHH--HTCC------
T ss_pred cCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHH-----HHHh--cCCC------
Confidence 3322 223456999999999999989999999999999999999999999754322211 1111 1110
Q ss_pred CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 681 NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 681 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.+...+ ...+.+++.+||+.||.+||++.|+++
T Consensus 259 ~~~~~~----~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 259 SIPKHI----NPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp CCCTTS----CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCCccC----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111122 245778999999999999999999986
No 183
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-38 Score=346.43 Aligned_cols=264 Identities=22% Similarity=0.326 Sum_probs=197.0
Q ss_pred HHHHhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchh-----cHHHHHHHHHHhhccCCCceeeeeeEEEeC
Q 040908 441 IKAATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQ-----GNREFVNEIGTISALQHPHLVKLYGCCIEG 514 (790)
Q Consensus 441 ~~~~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 514 (790)
+....++|++.+.||+|+||.||+|... +|+.||||++...... ..+.+.+|+.++++++||||+++++++.+.
T Consensus 5 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (346)
T 1ua2_A 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 84 (346)
T ss_dssp --------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred hHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC
Confidence 3445678999999999999999999964 6899999999753221 124688999999999999999999999999
Q ss_pred CeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecC
Q 040908 515 NQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFG 594 (790)
Q Consensus 515 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFG 594 (790)
+..++||||+++ +|.+++.. ....+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 85 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (346)
T 1ua2_A 85 SNISLVFDFMET-DLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFG 157 (346)
T ss_dssp TCCEEEEECCSE-EHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCG
T ss_pred CceEEEEEcCCC-CHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecc
Confidence 999999999986 88888843 2356899999999999999999999985 9999999999999999999999999
Q ss_pred CccccCCCCcceeeccccCCCcccHHHhhcC-CCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCC
Q 040908 595 LAKLDEEDNTHISTRVAGTFGYMAPEYAMRG-HLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGN 673 (790)
Q Consensus 595 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 673 (790)
+++....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+.. . ......+.
T Consensus 158 ~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~--~---~i~~~~~~ 231 (346)
T 1ua2_A 158 LAKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL--T---RIFETLGT 231 (346)
T ss_dssp GGSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--H---HHHHHHCC
T ss_pred cceeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHH--H---HHHHHcCC
Confidence 9986644332 23346789999999999764 5788999999999999999999998755432211 1 11111111
Q ss_pred c-----c------cccCCCCCCCCc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 674 L-----M------ELVDPNLGSNVD-----KEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 674 ~-----~------~~~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
. . +.+........+ ......+.+++..|++.||.+|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 232 PTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp CCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 0 000000000011 122357889999999999999999999987
No 184
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.3e-38 Score=342.60 Aligned_cols=265 Identities=22% Similarity=0.396 Sum_probs=200.3
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccch--hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK--QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
.++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 367999999999999999999965 589999999865432 23456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 104 e~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 104 EFVDHTILDDLELF----PNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp ECCSEEHHHHHHHS----TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecCCcchHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 99999999888632 346899999999999999999999985 99999999999999999999999999986544
Q ss_pred CCcceeeccccCCCcccHHHhhcC-CCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHH---------HHHHHHhh
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRG-HLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLD---------WALLLKEQ 671 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~---------~~~~~~~~ 671 (790)
... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+...... +.......
T Consensus 177 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 177 PGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred Ccc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence 322 22345689999999999875 78999999999999999999999997654332211100 00001111
Q ss_pred CCcccccCCCCCCCCcH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 672 GNLMELVDPNLGSNVDK-----EQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 672 ~~~~~~~d~~l~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
........+......+. .....+.+++..||+.||.+|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11111111222111111 22457889999999999999999999875
No 185
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=8.8e-39 Score=339.92 Aligned_cols=257 Identities=24% Similarity=0.424 Sum_probs=197.0
Q ss_pred hcCcceeeeecccCcEEEEeeeec--CCc--EEEEEEcccc---chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA--DGT--LIAVKQLSAK---SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQL 517 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~--~g~--~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 517 (790)
.++|++.+.||+|+||.||+|.+. +++ .||||++... .....+.+.+|+.++++++||||+++++++...+ .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 467999999999999999999853 333 6899998654 2334567899999999999999999999998765 8
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
++||||+++++|.+++.. ....+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++
T Consensus 96 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHh---ccCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccc
Confidence 899999999999999942 2356899999999999999999999985 9999999999999999999999999998
Q ss_pred ccCCCCcc--eeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCCc
Q 040908 598 LDEEDNTH--ISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGNL 674 (790)
Q Consensus 598 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 674 (790)
........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+.. .........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~------~~~~~~~~~ 243 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL------HKIDKEGER 243 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH------HHHHTSCCC
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHH------HHHHccCCC
Confidence 76544332 1233557889999999998889999999999999999999 99999754332211 111111110
Q ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 675 MELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 675 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
. ..+......+.+++..|++.||.+||++.++++.|++..
T Consensus 244 -----~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 244 -----L----PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp -----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred -----C----CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 0 111123456889999999999999999999999998764
No 186
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-38 Score=353.45 Aligned_cols=265 Identities=21% Similarity=0.305 Sum_probs=197.4
Q ss_pred HHHHhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeC-----
Q 040908 441 IKAATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEG----- 514 (790)
Q Consensus 441 ~~~~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~----- 514 (790)
++...++|++.+.||+|+||.||+|.. .+|+.||||++...... ..+|+.+++.++||||+++++++...
T Consensus 2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 345678999999999999999999985 57899999998654322 23799999999999999999998543
Q ss_pred ---------------------------------CeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHH
Q 040908 515 ---------------------------------NQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAY 561 (790)
Q Consensus 515 ---------------------------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~y 561 (790)
...++||||++ |+|.+.+.........+++..+..++.||++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 34889999998 58888775433345679999999999999999999
Q ss_pred hhhcCCCcEEeccCCCCcEEec-CCCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcC-CCCChhhHHHHHHH
Q 040908 562 LHEESRLKIVHRDIKATNVLLD-KDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRG-HLTDKADVYSFGIV 639 (790)
Q Consensus 562 LH~~~~~~iiHrDlk~~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvv 639 (790)
||+.+ |+||||||+|||++ .++.+||+|||+++....... .....||+.|+|||++.+. .++.++|||||||+
T Consensus 157 LH~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 157 IHSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 99885 99999999999998 688999999999986644332 2345689999999998875 48999999999999
Q ss_pred HHHHHhCCCCCccccccchhhHHHHHHHH---------HhhCCcccccCCCCCCC-----CcHHHHHHHHHHHHHccCCC
Q 040908 640 ALEIVSGRSNIMCKTKEEKFYLLDWALLL---------KEQGNLMELVDPNLGSN-----VDKEQVRVMINVALLCADVS 705 (790)
Q Consensus 640 l~elltG~~p~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~d 705 (790)
+|||++|+.||......+.. ....... .......+..-+..... .+......+.+++..||+.|
T Consensus 232 l~ell~g~~pf~~~~~~~~~--~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQL--VRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE 309 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred HHHHHhCCCCCCCCChHHHH--HHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence 99999999999765433221 1111100 00011111111111110 11123456889999999999
Q ss_pred CCCCCCHHHHHH
Q 040908 706 PTNRPLMSSVVS 717 (790)
Q Consensus 706 P~~RPt~~ev~~ 717 (790)
|.+|||+.|+++
T Consensus 310 P~~R~t~~e~l~ 321 (383)
T 3eb0_A 310 PDLRINPYEAMA 321 (383)
T ss_dssp GGGSCCHHHHHT
T ss_pred hhhCCCHHHHhc
Confidence 999999999975
No 187
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.8e-38 Score=346.02 Aligned_cols=261 Identities=24% Similarity=0.362 Sum_probs=199.4
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccch--hcHHHHHHHHHHhhccCCCceeeeeeEEEe--------
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSK--QGNREFVNEIGTISALQHPHLVKLYGCCIE-------- 513 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-------- 513 (790)
.++|++.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+|+.++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36899999999999999999996 5789999999865432 234578899999999999999999999987
Q ss_pred CCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeec
Q 040908 514 GNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDF 593 (790)
Q Consensus 514 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DF 593 (790)
.+..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccc
Confidence 4468999999985 777777332 346899999999999999999999985 999999999999999999999999
Q ss_pred CCccccCCCC---cceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHH
Q 040908 594 GLAKLDEEDN---THISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLK 669 (790)
Q Consensus 594 Gla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~ 669 (790)
|+++...... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........+. .
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~---~-- 243 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS---Q-- 243 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH---H--
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH---H--
Confidence 9998654322 112234678999999999876 457999999999999999999999997654332221111 1
Q ss_pred hhCCcccccCCC-------------CCCCCc-HHH------HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 670 EQGNLMELVDPN-------------LGSNVD-KEQ------VRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 670 ~~~~~~~~~d~~-------------l~~~~~-~~~------~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..+......-+. ...... .+. ...+.+++.+|++.||.+|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 244 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 011110000000 000000 111 235789999999999999999999876
No 188
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1e-38 Score=358.08 Aligned_cols=253 Identities=23% Similarity=0.344 Sum_probs=191.2
Q ss_pred HHhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccch--------hcHHHHHHHHHHhhccCCCceeeeeeEEEe
Q 040908 443 AATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSK--------QGNREFVNEIGTISALQHPHLVKLYGCCIE 513 (790)
Q Consensus 443 ~~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 513 (790)
...++|.+.+.||+|+||.||+|.. .+++.||||++..... .....+.+|+.++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 4568999999999999999999985 4688999999865321 11234889999999999999999999975
Q ss_pred CCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCC---CCeEE
Q 040908 514 GNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKD---LNPKI 590 (790)
Q Consensus 514 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~---~~~kl 590 (790)
.+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.+ +.+||
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEE
T ss_pred cCceEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEE
Confidence 4568999999999999999843 346899999999999999999999985 9999999999999654 45999
Q ss_pred eecCCccccCCCCcceeeccccCCCcccHHHhhc---CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHH
Q 040908 591 SDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMR---GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALL 667 (790)
Q Consensus 591 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~ 667 (790)
+|||+++...... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||......... ...
T Consensus 284 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~--~~~--- 356 (419)
T 3i6u_A 284 TDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL--KDQ--- 356 (419)
T ss_dssp CCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCH--HHH---
T ss_pred eecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHH--HHH---
Confidence 9999998765432 2344679999999999853 56788999999999999999999999754332211 110
Q ss_pred HHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 668 LKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 668 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
...+.... . +.. .......+.+++.+|++.||.+||++.|+++
T Consensus 357 -i~~~~~~~-~-~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 357 -ITSGKYNF-I-PEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp -HHTTCCCC-C-HHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -HhcCCCCC-C-chh----hcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 01111100 0 000 0012356889999999999999999999876
No 189
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=5e-38 Score=334.34 Aligned_cols=249 Identities=25% Similarity=0.397 Sum_probs=197.9
Q ss_pred cCcceeeeecccCcEEEEeeee-cCCcEEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEe----CCeEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIE----GNQLL 518 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~ 518 (790)
+.|.+.+.||+|+||.||+|.. .++..||+|++... .....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 3478889999999999999985 46789999998654 23345678999999999999999999999875 35689
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEec-CCCCeEEeecCCcc
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNPKISDFGLAK 597 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-~~~~~kl~DFGla~ 597 (790)
+||||+++|+|.+++. ....+++..+..++.|++.||+|||+.+ .+|+||||||+|||++ +++.+||+|||++.
T Consensus 106 lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLK----RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEecCCCCHHHHHH----HccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 9999999999999993 2356899999999999999999999874 3499999999999998 78999999999997
Q ss_pred ccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 598 LDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 598 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
...... .....||+.|+|||++. +.++.++|||||||++|||++|+.||......... .... ..+.....
T Consensus 181 ~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-----~~~~-~~~~~~~~ 250 (290)
T 1t4h_A 181 LKRASF---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI-----YRRV-TSGVKPAS 250 (290)
T ss_dssp GCCTTS---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH-----HHHH-TTTCCCGG
T ss_pred cccccc---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH-----HHHH-hccCCccc
Confidence 554332 23456999999999876 46899999999999999999999999653322111 1111 11111111
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.+......+.+++..||+.||.+|||+.|+++
T Consensus 251 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 251 --------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11112246889999999999999999999875
No 190
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.5e-39 Score=348.02 Aligned_cols=259 Identities=23% Similarity=0.295 Sum_probs=189.5
Q ss_pred HhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccC-CCceeeeeeEEE--------e
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQ-HPHLVKLYGCCI--------E 513 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~--------~ 513 (790)
...+|++.+.||+|+||.||+|.. .+++.||||++........+.+.+|+.++.++. ||||+++++++. .
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 346899999999999999999995 468999999987666666678999999999996 999999999994 3
Q ss_pred CCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeec
Q 040908 514 GNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDF 593 (790)
Q Consensus 514 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DF 593 (790)
....++||||+. |+|.+++.... ....+++..++.++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+||
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecC
Confidence 345899999996 79999884321 2346999999999999999999999873 34999999999999999999999999
Q ss_pred CCccccCCCCcc-----------eeeccccCCCcccHHHh---hcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchh
Q 040908 594 GLAKLDEEDNTH-----------ISTRVAGTFGYMAPEYA---MRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKF 659 (790)
Q Consensus 594 Gla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~ 659 (790)
|+++........ ......||+.|+|||++ .+..++.++|||||||++|||+||+.||........
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~- 261 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI- 261 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh-
Confidence 999866543221 11134589999999998 566788999999999999999999999964322110
Q ss_pred hHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 660 YLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 660 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
+...............+.+++..||+.||.+||++.|+++.|+....
T Consensus 262 ------------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 262 ------------------VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp ----------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------------------hcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 00000000011112346789999999999999999999999987654
No 191
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=6.5e-38 Score=333.90 Aligned_cols=252 Identities=27% Similarity=0.366 Sum_probs=197.6
Q ss_pred CcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEEecc
Q 040908 447 HFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLE 525 (790)
Q Consensus 447 ~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 525 (790)
+|.....||+|+||.||+|.. .+++.||||.+........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 344556999999999999995 5688999999977655556789999999999999999999999999999999999999
Q ss_pred CCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC-CCCeEEeecCCccccCCCCc
Q 040908 526 NNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK-DLNPKISDFGLAKLDEEDNT 604 (790)
Q Consensus 526 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~-~~~~kl~DFGla~~~~~~~~ 604 (790)
+++|.+++.... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++.......
T Consensus 103 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 103 GGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp EEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999999995321 1245678899999999999999999985 999999999999997 89999999999986544322
Q ss_pred ceeeccccCCCcccHHHhhcCC--CCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCCC
Q 040908 605 HISTRVAGTFGYMAPEYAMRGH--LTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNL 682 (790)
Q Consensus 605 ~~~~~~~gt~~y~aPE~~~~~~--~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 682 (790)
......||+.|+|||++.+.. ++.++||||||+++|||++|+.||......... .+... ... ..+.+
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~--~~~-----~~~~~ 247 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA---MFKVG--MFK-----VHPEI 247 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH---HHHHH--HHC-----CCCCC
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH---HHhhc--ccc-----ccccc
Confidence 223456999999999997653 789999999999999999999999643322111 00000 000 11122
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 683 GSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 683 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. .....+.+++..||+.||.+||++.|+++
T Consensus 248 ~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 248 PE----SMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CT----TSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cc----cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22 22346788999999999999999999875
No 192
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.5e-37 Score=342.33 Aligned_cols=259 Identities=20% Similarity=0.362 Sum_probs=206.2
Q ss_pred cHHHHHHHhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccch--------hcHHHHHHHHHHhhcc-CCCceee
Q 040908 437 TLRQIKAATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK--------QGNREFVNEIGTISAL-QHPHLVK 506 (790)
Q Consensus 437 ~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l-~H~niv~ 506 (790)
.........++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.+++++ +||||++
T Consensus 85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 164 (365)
T 2y7j_A 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164 (365)
T ss_dssp HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 34455566788999999999999999999975 789999999865321 1134678999999999 7999999
Q ss_pred eeeEEEeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCC
Q 040908 507 LYGCCIEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL 586 (790)
Q Consensus 507 l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~ 586 (790)
+++++...+..++||||+++++|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++
T Consensus 165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~ 237 (365)
T 2y7j_A 165 LIDSYESSSFMFLVFDLMRKGELFDYLT----EKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNM 237 (365)
T ss_dssp EEEEEEBSSEEEEEECCCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTC
T ss_pred EEEEEeeCCEEEEEEEeCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCC
Confidence 9999999999999999999999999994 2356899999999999999999999985 99999999999999999
Q ss_pred CeEEeecCCccccCCCCcceeeccccCCCcccHHHhhc------CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhh
Q 040908 587 NPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMR------GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFY 660 (790)
Q Consensus 587 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~ 660 (790)
.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 238 ~ikl~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-- 313 (365)
T 2y7j_A 238 QIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM-- 313 (365)
T ss_dssp CEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--
T ss_pred CEEEEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHH--
Confidence 999999999986654332 234679999999999864 3578899999999999999999999975432211
Q ss_pred HHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 661 LLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 661 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
... ...+... ...+.. . .....+.+++..|++.||.+||++.|+++
T Consensus 314 -~~~----i~~~~~~-~~~~~~-~----~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 314 -LRM----IMEGQYQ-FSSPEW-D----DRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp -HHH----HHHTCCC-CCHHHH-S----SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -HHH----HHhCCCC-CCCccc-c----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 110 0111110 000000 0 12345788999999999999999999976
No 193
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.2e-38 Score=338.33 Aligned_cols=256 Identities=21% Similarity=0.371 Sum_probs=204.2
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
..++|++.+.||+|+||.||+|... +|+.||+|++..........+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3568999999999999999999964 689999999976544455678899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe---cCCCCeEEeecCCcccc
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 599 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~DFGla~~~ 599 (790)
|+++++|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++..
T Consensus 87 ~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 87 LVSGGELFDRIL----ERGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCCSCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred cCCCccHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 999999999983 2346899999999999999999999985 9999999999999 78899999999999854
Q ss_pred CCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccC
Q 040908 600 EEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVD 679 (790)
Q Consensus 600 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 679 (790)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ... ..+.. .. .
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~i-~~~~~-~~-~ 227 (304)
T 2jam_A 160 QNGI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLF------EKI-KEGYY-EF-E 227 (304)
T ss_dssp CCBT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHH-HHCCC-CC-C
T ss_pred CCCc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH------HHH-HcCCC-CC-C
Confidence 4321 23356899999999999889999999999999999999999999754322111 111 11111 00 1
Q ss_pred CCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcC
Q 040908 680 PNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS--MLEGR 722 (790)
Q Consensus 680 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~--~L~~~ 722 (790)
... .......+.+++..|++.||.+||++.|+++ .+++.
T Consensus 228 ~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (304)
T 2jam_A 228 SPF----WDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN 268 (304)
T ss_dssp TTT----TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred ccc----cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence 111 1123356788999999999999999999986 45543
No 194
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.8e-38 Score=339.35 Aligned_cols=262 Identities=25% Similarity=0.397 Sum_probs=186.6
Q ss_pred HHHhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEE
Q 040908 442 KAATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 442 ~~~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
....++|++.+.||+|+||.||+|.. .+++.||||++.... ....+++.+|+.++++++||||+++++++...+..++
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 34467899999999999999999985 468899999986543 3345678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCC----ccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCC
Q 040908 520 IYEYLENNSLARALFGP----EEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 595 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~----~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGl 595 (790)
||||+++++|.+++... ......+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccc
Confidence 99999999999998421 112346899999999999999999999985 99999999999999999999999999
Q ss_pred ccccCCCCc----ceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHh
Q 040908 596 AKLDEEDNT----HISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKE 670 (790)
Q Consensus 596 a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~ 670 (790)
++....... .......||+.|+|||++.. ..++.++||||||+++|||++|+.||.......... .. .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----~~--~ 240 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM-----LT--L 240 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH-----HH--H
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH-----HH--h
Confidence 976543221 11234569999999999876 568999999999999999999999997544322110 00 1
Q ss_pred hCCccc----ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 671 QGNLME----LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 671 ~~~~~~----~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
...... ..++.....+ ...+.+++..||+.||.+||++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 241 QNDPPSLETGVQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TSSCCCTTC-----CCCCCC----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCCCccccccccchhhhhh----hHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 111111 1111111222 346788999999999999999999876
No 195
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=9.5e-39 Score=348.06 Aligned_cols=255 Identities=22% Similarity=0.347 Sum_probs=199.1
Q ss_pred HhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc-hhcHHHHHHHHHH-hhccCCCceeeeeeEEEeCCeEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS-KQGNREFVNEIGT-ISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
..++|++.+.||+|+||.||+|.. .+|+.||||++.... .....++..|..+ ++.++||||+++++++.+.+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 457899999999999999999995 578999999987542 2334456666665 7888999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++ +|.+++.........+++..+..++.||+.||+|||+.. +|+||||||+|||++.++.+||+|||+++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 999985 999888533234467999999999999999999999862 49999999999999999999999999998654
Q ss_pred CCCcceeeccccCCCcccHHHhh----cCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAM----RGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~----~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
... ......||+.|+|||++. ...++.++|||||||++|||+||+.||........ ... ...... .
T Consensus 206 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~----~~~-~~~~~~-~-- 275 (340)
T 3an0_A 206 DSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ----QLK-QVVEEP-S-- 275 (340)
T ss_dssp CHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH----HHH-HHHHSC-C--
T ss_pred ccc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHH----HHH-HHhcCC-C--
Confidence 321 123356999999999974 34788999999999999999999999975322111 011 111111 0
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
+.. .......++.+++.+||+.||.+||++.|+++
T Consensus 276 ---~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 276 ---PQL---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp ---CCC---CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---CCC---CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111 11123456889999999999999999999976
No 196
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=8.6e-38 Score=338.81 Aligned_cols=256 Identities=17% Similarity=0.276 Sum_probs=199.1
Q ss_pred cCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccC-CCceeeeeeEEEe--CCeEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQ-HPHLVKLYGCCIE--GNQLLLIY 521 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~--~~~~~lV~ 521 (790)
++|++.+.||+|+||.||+|.. .+++.||||++... ..+.+.+|+.++++++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 6799999999999999999985 57899999998643 3467889999999997 9999999999987 66789999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCC-CeEEeecCCccccC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL-NPKISDFGLAKLDE 600 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~-~~kl~DFGla~~~~ 600 (790)
||+.+++|.+++ ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++...
T Consensus 113 e~~~~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 113 EHVNNTDFKQLY-------QTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp ECCCCCCHHHHG-------GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eccCchhHHHHH-------HhCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 999999999988 24788999999999999999999985 99999999999999776 89999999998665
Q ss_pred CCCcceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHH--------Hhh
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLL--------KEQ 671 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~--------~~~ 671 (790)
.... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||........ .+....... ...
T Consensus 183 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 183 PGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD-QLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp TTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH-HHHHHHHHHCHHHHHHHHHH
T ss_pred CCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH-HHHHHHHhcCCchhhhHHHH
Confidence 4332 234568999999999987 6789999999999999999999999964332211 111111000 000
Q ss_pred CC------cccccC--------CCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 672 GN------LMELVD--------PNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 672 ~~------~~~~~d--------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. ..+... ..............+.+++..|++.||.+|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 000000 00111111123467889999999999999999999976
No 197
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=4.9e-38 Score=331.68 Aligned_cols=247 Identities=23% Similarity=0.398 Sum_probs=194.6
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 368999999999999999999965 78999999986542 23356789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 90 MEYVSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccC
Confidence 999999999999932 346899999999999999999999985 9999999999999999999999999998664
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCC-CChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHL-TDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVD 679 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 679 (790)
.... .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||........ .. .. ..+..
T Consensus 163 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~~---~~-~~~~~----- 228 (276)
T 2h6d_A 163 DGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL---FK---KI-RGGVF----- 228 (276)
T ss_dssp C---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HH---HH-HHCCC-----
T ss_pred CCcc--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH---HH---Hh-hcCcc-----
Confidence 4322 234568999999999987665 5799999999999999999999965432211 11 11 11110
Q ss_pred CCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 680 PNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 680 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..... ....+.+++.+|++.||.+||++.|+++
T Consensus 229 -~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 229 -YIPEY----LNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -CCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -cCchh----cCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 01111 2345788999999999999999999987
No 198
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.3e-38 Score=336.09 Aligned_cols=252 Identities=27% Similarity=0.426 Sum_probs=199.7
Q ss_pred HHhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 443 AATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 443 ~~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
...++|++.+.||+|+||.||+|... +|+.||+|++... .....+.+|+.++++++||||+++++++...+..++||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 34678999999999999999999965 5899999998653 23467899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+++++|.+++. .....+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 104 e~~~~~~L~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 104 EYCGAGSVSDIIR---LRNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp ECCTTEEHHHHHH---HHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred ecCCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 9999999999983 23457899999999999999999999985 99999999999999999999999999986544
Q ss_pred CCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCC
Q 040908 602 DNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPN 681 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 681 (790)
... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......... ... ........
T Consensus 178 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~-~~~~~~~~---- 245 (314)
T 3com_A 178 TMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI------FMI-PTNPPPTF---- 245 (314)
T ss_dssp TBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHH-HHSCCCCC----
T ss_pred hcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH------HHH-hcCCCccc----
Confidence 322 223456899999999999989999999999999999999999999754322111 011 11111111
Q ss_pred CCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 682 LGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 682 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..+......+.+++..||+.||.+||++.++++
T Consensus 246 ---~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 ---RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ---SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 111122356789999999999999999999976
No 199
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.1e-38 Score=349.95 Aligned_cols=254 Identities=11% Similarity=0.035 Sum_probs=182.7
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccch---hcHHHHHHHHHHhhcc--CCCceeeee-------eEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK---QGNREFVNEIGTISAL--QHPHLVKLY-------GCC 511 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l--~H~niv~l~-------g~~ 511 (790)
..+|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 346899999999999999999954 789999999976432 3345677885555444 699988754 444
Q ss_pred EeC-----------------CeEEEEEEeccCCChhhhhcCCccccCCCChhhH------HHHHHHHHHHHHHhhhcCCC
Q 040908 512 IEG-----------------NQLLLIYEYLENNSLARALFGPEEHRLKLDWPTR------HNICIGIARGLAYLHEESRL 568 (790)
Q Consensus 512 ~~~-----------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~aL~yLH~~~~~ 568 (790)
... ...++||||++ |+|.+++... ...+.+..+ ..++.||+.||+|||+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-- 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-- 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC--
Confidence 432 34899999999 8999999432 234577777 788899999999999985
Q ss_pred cEEeccCCCCcEEecCCCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhc--CCCCChhhHHHHHHHHHHHHhC
Q 040908 569 KIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMR--GHLTDKADVYSFGIVALEIVSG 646 (790)
Q Consensus 569 ~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~S~Gvvl~elltG 646 (790)
|+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||+||
T Consensus 215 -ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 215 -LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp -EEETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred -CccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 999999999999999999999999999865431 224567799999999987 6799999999999999999999
Q ss_pred CCCCccccccchhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 647 RSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 647 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
+.||........... ........................+.+++..||+.||.+|||+.|+++
T Consensus 290 ~~Pf~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 290 FLPFGLVTPGIKGSW--------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp SCSTTBCCTTCTTCC--------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCCcCcccccch--------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 999976532211000 000000001111111111133457888999999999999999999864
No 200
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.7e-38 Score=338.25 Aligned_cols=253 Identities=24% Similarity=0.407 Sum_probs=198.6
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
..++|++.+.||+|+||.||+|... +++.||+|++..........+.+|+.++++++||||+++++++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 4578999999999999999999965 588999999987666667889999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCC
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 602 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 602 (790)
|+++++|.+++.. ....+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 97 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 97 FCPGGAVDAIMLE---LDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp CCTTEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred eCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999998842 2356899999999999999999999985 999999999999999999999999997532211
Q ss_pred CcceeeccccCCCcccHHHhh-----cCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 603 NTHISTRVAGTFGYMAPEYAM-----RGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 603 ~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
. .......||+.|+|||++. ...++.++||||||+++|||++|+.||........ ...... ......
T Consensus 171 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~-~~~~~~ 242 (302)
T 2j7t_A 171 L-QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV------LLKIAK-SDPPTL 242 (302)
T ss_dssp H-HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHH-SCCCCC
T ss_pred c-cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH------HHHHhc-cCCccc
Confidence 1 1122356899999999984 56788999999999999999999999975432211 111111 111111
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..+......+.+++..||+.||.+|||+.|+++
T Consensus 243 -------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 243 -------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -------CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 011222356788999999999999999999865
No 201
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=5.1e-38 Score=356.83 Aligned_cols=194 Identities=24% Similarity=0.430 Sum_probs=153.5
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEeC-----Ce
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIEG-----NQ 516 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~ 516 (790)
.++|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+.+|++++|||||++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999854 6899999998653 233456789999999999999999999999543 56
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCc
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 596 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla 596 (790)
.++||||+. |+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||||+.++.+||+|||+|
T Consensus 132 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccc-cchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccc
Confidence 899999984 689998842 356899999999999999999999985 999999999999999999999999999
Q ss_pred cccCCCCc--------------------------ceeeccccCCCcccHHHh-hcCCCCChhhHHHHHHHHHHHHhC
Q 040908 597 KLDEEDNT--------------------------HISTRVAGTFGYMAPEYA-MRGHLTDKADVYSFGIVALEIVSG 646 (790)
Q Consensus 597 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~s~ksDV~S~Gvvl~elltG 646 (790)
+....... ...+..+||+.|+|||++ ....++.++|||||||++|||+||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 86542211 122446789999999987 456799999999999999999994
No 202
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1e-37 Score=357.73 Aligned_cols=250 Identities=25% Similarity=0.404 Sum_probs=197.8
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
.++|++.+.||+|+||.||+|... ++..||+|++.... ......+.+|+.+++.++|||||+++++|.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999964 68899999987542 334567899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC---CCCeEEeecCCccc
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKISDFGLAKL 598 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~DFGla~~ 598 (790)
||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.
T Consensus 116 e~~~~g~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEII----HRMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999883 2356899999999999999999999985 999999999999976 45599999999987
Q ss_pred cCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccccc
Q 040908 599 DEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELV 678 (790)
Q Consensus 599 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 678 (790)
..... ......||+.|+|||++. +.++.++|||||||++|||++|+.||......+... .. ..+... ..
T Consensus 189 ~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~------~i-~~~~~~-~~ 257 (494)
T 3lij_A 189 FENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILR------KV-EKGKYT-FD 257 (494)
T ss_dssp CBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HH-HHTCCC-CC
T ss_pred CCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HH-HhCCCC-CC
Confidence 65432 224467999999999886 578999999999999999999999997654322111 11 111110 00
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 679 DPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 679 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.+.. . .....+.+++..||+.||.+|||+.|+++
T Consensus 258 ~~~~-~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 258 SPEW-K----NVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp SGGG-T----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhc-c----cCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 0100 1 12346788999999999999999999885
No 203
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.9e-37 Score=330.96 Aligned_cols=252 Identities=20% Similarity=0.338 Sum_probs=202.7
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---------hhcHHHHHHHHHHhhccC-CCceeeeeeEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---------KQGNREFVNEIGTISALQ-HPHLVKLYGCCI 512 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---------~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~ 512 (790)
..++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4578999999999999999999964 68999999986432 122356889999999995 999999999999
Q ss_pred eCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEee
Q 040908 513 EGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISD 592 (790)
Q Consensus 513 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 592 (790)
..+..++||||+++++|.+++. ....+++..+..++.||+.||+|||+.+ ++||||||+||+++.++.+||+|
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLT----EKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECC
T ss_pred cCCeEEEEEeccCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEec
Confidence 9999999999999999999993 2357899999999999999999999985 99999999999999999999999
Q ss_pred cCCccccCCCCcceeeccccCCCcccHHHhh------cCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHH
Q 040908 593 FGLAKLDEEDNTHISTRVAGTFGYMAPEYAM------RGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWAL 666 (790)
Q Consensus 593 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~ 666 (790)
||+++....... .....||+.|+|||++. ...++.++||||||+++|||++|+.||......... .
T Consensus 168 fg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~------~ 239 (298)
T 1phk_A 168 FGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML------R 239 (298)
T ss_dssp CTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------H
T ss_pred ccchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHH------H
Confidence 999986654332 23456899999999985 456789999999999999999999999654322111 1
Q ss_pred HHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 667 LLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 667 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. ..+... . ...........+.+++..|++.||.+||++.|+++
T Consensus 240 ~~-~~~~~~-~-----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 240 MI-MSGNYQ-F-----GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HH-HHTCCC-C-----CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HH-hcCCcc-c-----CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11 111110 0 00111123456889999999999999999999865
No 204
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.3e-37 Score=343.87 Aligned_cols=263 Identities=22% Similarity=0.328 Sum_probs=201.5
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccC--------CCceeeeeeEEE---
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQ--------HPHLVKLYGCCI--- 512 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~g~~~--- 512 (790)
.++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+.+++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 47899999999999999999985 46889999999653 334567889999999986 788999999987
Q ss_pred -eCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCC-----
Q 040908 513 -EGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL----- 586 (790)
Q Consensus 513 -~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~----- 586 (790)
.....++||||+ +++|.+.+... ....+++..+..++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhh
Confidence 456789999999 55666666322 2246899999999999999999999972 499999999999999775
Q ss_pred --------------------------------------------CeEEeecCCccccCCCCcceeeccccCCCcccHHHh
Q 040908 587 --------------------------------------------NPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYA 622 (790)
Q Consensus 587 --------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~ 622 (790)
.+||+|||+++..... .....||+.|+|||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHH
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhh
Confidence 8999999999866543 2335689999999999
Q ss_pred hcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHH-HHHHHhhCCc-----------ccccCCC-----C---
Q 040908 623 MRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDW-ALLLKEQGNL-----------MELVDPN-----L--- 682 (790)
Q Consensus 623 ~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~-~~~~~~~~~~-----------~~~~d~~-----l--- 682 (790)
.+..++.++|||||||++|||+||+.||............+. .......+.. .+..... +
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 999999999999999999999999999975443221110100 0110000110 0000000 0
Q ss_pred -----------CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 683 -----------GSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 683 -----------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
....+......+.+++.+||+.||.+|||+.|+++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01235667788999999999999999999999875
No 205
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=7.4e-38 Score=341.95 Aligned_cols=258 Identities=21% Similarity=0.321 Sum_probs=203.9
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhc-----------------HHHHHHHHHHhhccCCCceeee
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQG-----------------NREFVNEIGTISALQHPHLVKL 507 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~-----------------~~~~~~E~~~l~~l~H~niv~l 507 (790)
.++|++.+.||+|+||.||+|.. +|+.||+|++....... ...+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999999 89999999987543221 1789999999999999999999
Q ss_pred eeEEEeCCeEEEEEEeccCCChhhh------hcCCccccCCCChhhHHHHHHHHHHHHHHhhh-cCCCcEEeccCCCCcE
Q 040908 508 YGCCIEGNQLLLIYEYLENNSLARA------LFGPEEHRLKLDWPTRHNICIGIARGLAYLHE-ESRLKIVHRDIKATNV 580 (790)
Q Consensus 508 ~g~~~~~~~~~lV~Ey~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiHrDlk~~NI 580 (790)
++++.+.+..++||||+++|+|.++ +.. .....+++..+..++.|++.||+|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999998 532 124679999999999999999999998 6 499999999999
Q ss_pred EecCCCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcC-CCCC-hhhHHHHHHHHHHHHhCCCCCccccccch
Q 040908 581 LLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRG-HLTD-KADVYSFGIVALEIVSGRSNIMCKTKEEK 658 (790)
Q Consensus 581 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~-ksDV~S~Gvvl~elltG~~p~~~~~~~~~ 658 (790)
|++.++.+||+|||+++..... ......||+.|+|||++.+. .++. ++|||||||++|||++|+.||........
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 260 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE 260 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH
T ss_pred EEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence 9999999999999999865443 23446799999999999877 5666 99999999999999999999976543211
Q ss_pred hhHHHHHHHHHhhCCccccc------CCCCC---CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 659 FYLLDWALLLKEQGNLMELV------DPNLG---SNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 659 ~~l~~~~~~~~~~~~~~~~~------d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
... . ...+...... .+... ..........+.+++..||+.||.+||++.|+++
T Consensus 261 --~~~---~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 261 --LFN---N-IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp --HHH---H-HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred --HHH---H-HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111 1 1111110000 00000 0001223457889999999999999999999876
No 206
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.5e-37 Score=348.70 Aligned_cols=265 Identities=24% Similarity=0.317 Sum_probs=197.1
Q ss_pred cCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeC------CeEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEG------NQLL 518 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~~~ 518 (790)
.+|++.+.||+|+||.||+|... +|+.||||++..... .+.+|++++++++|||||+++++|... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46889999999999999999975 589999999864322 234799999999999999999998642 2367
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCC-CCeEEeecCCcc
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKD-LNPKISDFGLAK 597 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~-~~~kl~DFGla~ 597 (790)
+||||+++ +|.+.+.........+++..+..++.||++||+|||+.+ |+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999986 666665332233467999999999999999999999985 9999999999999965 568999999998
Q ss_pred ccCCCCcceeeccccCCCcccHHHhhcC-CCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHH--------
Q 040908 598 LDEEDNTHISTRVAGTFGYMAPEYAMRG-HLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLL-------- 668 (790)
Q Consensus 598 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~-------- 668 (790)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+.. .......
T Consensus 206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l--~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL--VEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCSCCHHHH
T ss_pred hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHhCCCCHHHH
Confidence 6644332 2345789999999999765 7899999999999999999999999765432221 1111110
Q ss_pred -HhhCCcccccCCCCCCC-----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcC
Q 040908 669 -KEQGNLMELVDPNLGSN-----VDKEQVRVMINVALLCADVSPTNRPLMSSVVS--MLEGR 722 (790)
Q Consensus 669 -~~~~~~~~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~--~L~~~ 722 (790)
.......+...+.+... +......++.+++.+||+.||.+||++.|+++ .+++.
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence 00111111111111110 11122357889999999999999999999986 44443
No 207
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.5e-37 Score=347.81 Aligned_cols=201 Identities=22% Similarity=0.323 Sum_probs=172.3
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhcc------CCCceeeeeeEEEeCCe
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISAL------QHPHLVKLYGCCIEGNQ 516 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~g~~~~~~~ 516 (790)
...+|++.+.||+|+||.||+|... +++.||||++... ......+.+|+.+++.+ +|+||+++++++...+.
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 3467999999999999999999854 5899999999753 23345677888888777 57799999999999999
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCC--eEEeecC
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN--PKISDFG 594 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~--~kl~DFG 594 (790)
.++||||+. ++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred EEEEEeccC-CCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecc
Confidence 999999996 68999884322 245899999999999999999999985 999999999999999987 9999999
Q ss_pred CccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccc
Q 040908 595 LAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTK 655 (790)
Q Consensus 595 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~ 655 (790)
+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 248 ~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 248 SSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp TCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 99865432 2345789999999999999999999999999999999999999976543
No 208
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-37 Score=339.99 Aligned_cols=259 Identities=20% Similarity=0.349 Sum_probs=196.5
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCC------
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGN------ 515 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 515 (790)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46899999999999999999996 46899999998653 2233467889999999999999999999997653
Q ss_pred eEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCC
Q 040908 516 QLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 595 (790)
Q Consensus 516 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGl 595 (790)
..++||||+ +++|.+++.. ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 7899999832 46899999999999999999999985 99999999999999999999999999
Q ss_pred ccccCCCCcceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCc
Q 040908 596 AKLDEEDNTHISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNL 674 (790)
Q Consensus 596 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 674 (790)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+....+ ....+..
T Consensus 175 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i-----~~~~g~~ 245 (367)
T 1cm8_A 175 ARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI-----MKVTGTP 245 (367)
T ss_dssp CEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-----HHHHCCC
T ss_pred ccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-----HHhcCCC
Confidence 9865432 234678999999999987 68999999999999999999999999765432221111 0000000
Q ss_pred --------------------ccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcC
Q 040908 675 --------------------MELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS--MLEGR 722 (790)
Q Consensus 675 --------------------~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~--~L~~~ 722 (790)
.+....... .........+.+++.+|++.||.+|||+.|+++ .++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 246 PAEFVQRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314 (367)
T ss_dssp CHHHHHTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred CHHHHHHhhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence 000000000 011122356788999999999999999999987 45543
No 209
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.2e-37 Score=356.50 Aligned_cols=255 Identities=23% Similarity=0.352 Sum_probs=203.8
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
..++|++.+.||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3568999999999999999999964 68999999986532 33457789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEec---CCCCeEEeecCCcc
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLD---KDLNPKISDFGLAK 597 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~---~~~~~kl~DFGla~ 597 (790)
|||+.+|+|.+.+. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++
T Consensus 100 ~e~~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 100 GELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp ECCCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 99999999999883 2356899999999999999999999985 99999999999995 55679999999998
Q ss_pred ccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccc
Q 040908 598 LDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL 677 (790)
Q Consensus 598 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 677 (790)
...... ......||+.|+|||++.+ .++.++|||||||++|||++|+.||......+.. . . ...+.....
T Consensus 173 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~---~-i~~~~~~~~ 242 (486)
T 3mwu_A 173 CFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---K---R-VETGKYAFD 242 (486)
T ss_dssp TBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---H---H-HHHTCCCSC
T ss_pred ECCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---H---H-HHhCCCCCC
Confidence 665432 2234579999999999875 6899999999999999999999999765432211 1 1 111111100
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhc
Q 040908 678 VDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS--MLEG 721 (790)
Q Consensus 678 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~--~L~~ 721 (790)
..........+.+++..||+.||.+|||+.|+++ .++.
T Consensus 243 ------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~ 282 (486)
T 3mwu_A 243 ------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282 (486)
T ss_dssp ------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHH
T ss_pred ------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhcc
Confidence 0001122356789999999999999999999987 4444
No 210
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=7.1e-38 Score=358.17 Aligned_cols=251 Identities=25% Similarity=0.351 Sum_probs=204.3
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc---hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 519 (790)
..++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3467999999999999999999965 78999999986432 3446779999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe---cCCCCeEEeecCCc
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLA 596 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~DFGla 596 (790)
||||+.+|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 104 v~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 9999999999999843 346899999999999999999999985 9999999999999 56789999999999
Q ss_pred cccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 597 KLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 597 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
+....... .....||+.|+|||++.+ .++.++|||||||++|||++|+.||......+.. .. ...+....
T Consensus 177 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~~----i~~~~~~~ 246 (484)
T 3nyv_A 177 THFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL---KK----VEKGKYTF 246 (484)
T ss_dssp HHBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HH----HHHCCCCC
T ss_pred EEcccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHH---HH----HHcCCCCC
Confidence 86654332 234569999999999866 7899999999999999999999999765432211 11 11111110
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
. ..........+.+++..|++.+|.+|||+.|+++
T Consensus 247 ~------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 247 E------LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp C------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred C------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 0 0001123456789999999999999999999986
No 211
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.7e-37 Score=349.67 Aligned_cols=199 Identities=24% Similarity=0.406 Sum_probs=166.5
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEeC-----Ce
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIEG-----NQ 516 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~ 516 (790)
.++|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+.++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 478999999999999999999854 6889999999753 233456789999999999999999999999766 57
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCc
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 596 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla 596 (790)
.++||||+. |+|.+++.. ...+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+|
T Consensus 105 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999987 599999842 356899999999999999999999985 999999999999999999999999999
Q ss_pred cccCCCCc---------------------ceeeccccCCCcccHHHh-hcCCCCChhhHHHHHHHHHHHHhCCCCCc
Q 040908 597 KLDEEDNT---------------------HISTRVAGTFGYMAPEYA-MRGHLTDKADVYSFGIVALEIVSGRSNIM 651 (790)
Q Consensus 597 ~~~~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~s~ksDV~S~Gvvl~elltG~~p~~ 651 (790)
+....... ...+..+||+.|+|||++ ....++.++|||||||++|||++|..|+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 86543221 123457799999999986 45679999999999999999998655543
No 212
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.2e-37 Score=357.87 Aligned_cols=255 Identities=26% Similarity=0.365 Sum_probs=202.0
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccch-------------hcHHHHHHHHHHhhccCCCceeeeee
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK-------------QGNREFVNEIGTISALQHPHLVKLYG 509 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~g 509 (790)
..++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4578999999999999999999964 578999999865321 23467899999999999999999999
Q ss_pred EEEeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCC---
Q 040908 510 CCIEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL--- 586 (790)
Q Consensus 510 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~--- 586 (790)
++.+.+..++||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQII----NRHKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCc
Confidence 9999999999999999999999883 2356999999999999999999999985 99999999999998776
Q ss_pred CeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHH
Q 040908 587 NPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWAL 666 (790)
Q Consensus 587 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~ 666 (790)
.+||+|||+++....... .....||+.|+|||++. +.++.++|||||||++|||++|+.||......+...
T Consensus 187 ~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~------ 257 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIK------ 257 (504)
T ss_dssp SEEECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------
T ss_pred cEEEEECCCCEEcCCCCc--cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH------
Confidence 699999999987654332 23457999999999986 568999999999999999999999997654332111
Q ss_pred HHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhc
Q 040908 667 LLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS--MLEG 721 (790)
Q Consensus 667 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~--~L~~ 721 (790)
. ...+.... +... ......++.+++..|++.||.+|||+.|+++ .+.+
T Consensus 258 ~-i~~~~~~~--~~~~----~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~ 307 (504)
T 3q5i_A 258 K-VEKGKYYF--DFND----WKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK 307 (504)
T ss_dssp H-HHHCCCCC--CHHH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred H-HHcCCCCC--Cccc----cCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhh
Confidence 1 11111100 0000 0012356889999999999999999999986 4444
No 213
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.9e-37 Score=340.74 Aligned_cols=261 Identities=19% Similarity=0.277 Sum_probs=192.1
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEeCC------
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIEGN------ 515 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 515 (790)
.++|++.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 46899999999999999999985 46889999998653 2334567889999999999999999999997654
Q ss_pred eEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCC
Q 040908 516 QLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 595 (790)
Q Consensus 516 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGl 595 (790)
..++||||+++ +|.+.+. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999975 7888773 35889999999999999999999985 99999999999999999999999999
Q ss_pred ccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHH-------------
Q 040908 596 AKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLL------------- 662 (790)
Q Consensus 596 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~------------- 662 (790)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+
T Consensus 174 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 174 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHT
T ss_pred cccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 98654322 223467999999999999999999999999999999999999999765432211000
Q ss_pred ---HHHHHHHhh-CC-----cccccCCCC-C--CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 663 ---DWALLLKEQ-GN-----LMELVDPNL-G--SNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 663 ---~~~~~~~~~-~~-----~~~~~d~~l-~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
......... .. +.+...... . ..........+.+++.+|++.||.+|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 000000000 00 000000000 0 0011233567899999999999999999999987
No 214
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.1e-38 Score=341.25 Aligned_cols=260 Identities=22% Similarity=0.361 Sum_probs=198.4
Q ss_pred CccHHHHHHHhcCcceeeeecccCcEEEEeeeecCCcEEEEEEcccc--chhcHHHHHHHHHHhhccC--CCceeeeeeE
Q 040908 435 SFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAK--SKQGNREFVNEIGTISALQ--HPHLVKLYGC 510 (790)
Q Consensus 435 ~~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l~g~ 510 (790)
.+.++.+....++|++.+.||+|+||.||+|...+++.||||++... .......+.+|+.++.+++ |+||++++++
T Consensus 17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~ 96 (313)
T 3cek_A 17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 96 (313)
T ss_dssp ---CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence 34444445566789999999999999999999888999999998643 2334567899999999997 5999999999
Q ss_pred EEeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEE
Q 040908 511 CIEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKI 590 (790)
Q Consensus 511 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 590 (790)
+...+..++||| +.+++|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+|||+++ +.+||
T Consensus 97 ~~~~~~~~lv~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL 167 (313)
T 3cek_A 97 EITDQYIYMVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKL 167 (313)
T ss_dssp EECSSEEEEEEC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEE
T ss_pred eecCCEEEEEEe-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEE
Confidence 999999999999 678899999942 346899999999999999999999985 999999999999975 78999
Q ss_pred eecCCccccCCCCcc-eeeccccCCCcccHHHhhc-----------CCCCChhhHHHHHHHHHHHHhCCCCCccccccch
Q 040908 591 SDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMR-----------GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEK 658 (790)
Q Consensus 591 ~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~ 658 (790)
+|||+++........ ......||+.|+|||++.. ..++.++|||||||++|||++|+.||........
T Consensus 168 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 247 (313)
T 3cek_A 168 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS 247 (313)
T ss_dssp CCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH
T ss_pred eeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH
Confidence 999999866443322 2234569999999999875 4688899999999999999999999964332111
Q ss_pred hhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 659 FYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 659 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
. .. ..+++......+......+.+++..||+.||.+||++.|+++
T Consensus 248 ----~-~~---------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 248 ----K-LH---------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp ----H-HH---------HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----H-HH---------HHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0 01 111111111111122346788999999999999999999986
No 215
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=6.7e-38 Score=369.90 Aligned_cols=261 Identities=25% Similarity=0.390 Sum_probs=205.3
Q ss_pred HHHHHhcCcceeeeecccCcEEEEeeeec----CCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeC
Q 040908 440 QIKAATNHFDVANKIGEGGFGPVYKGLLA----DGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEG 514 (790)
Q Consensus 440 ~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~----~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 514 (790)
+.+...++|++.+.||+|+||.||+|.+. .+..||+|++.... ....+.|.+|+.++++++||||+++++++. .
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 33444678999999999999999999863 24679999987543 333467999999999999999999999985 4
Q ss_pred CeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecC
Q 040908 515 NQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFG 594 (790)
Q Consensus 515 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFG 594 (790)
+..++||||+++|+|.+++. .....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG 536 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFG 536 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHH---HTTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCC
T ss_pred CceEEEEEcCCCCcHHHHHH---hccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecC
Confidence 56899999999999999994 22346899999999999999999999985 9999999999999999999999999
Q ss_pred CccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhCC
Q 040908 595 LAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQGN 673 (790)
Q Consensus 595 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~ 673 (790)
+++..............+|+.|+|||++....++.++|||||||++|||++ |+.||......+. .. ... .+.
T Consensus 537 ~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~---~~---~i~-~~~ 609 (656)
T 2j0j_A 537 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV---IG---RIE-NGE 609 (656)
T ss_dssp CCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---HH---HHH-HTC
T ss_pred CCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH---HH---HHH-cCC
Confidence 998765544333344567889999999999999999999999999999997 9999975433221 11 111 111
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 040908 674 LMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRV 723 (790)
Q Consensus 674 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~ 723 (790)
. ... +......+.+++..||+.||.+||++.|+++.|+...
T Consensus 610 ~-----~~~----~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 610 R-----LPM----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp C-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C-----CCC----CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1 111 1123356788999999999999999999999998653
No 216
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.2e-37 Score=368.80 Aligned_cols=249 Identities=23% Similarity=0.345 Sum_probs=203.8
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEcccc---chhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEE
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAK---SKQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLL 518 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 518 (790)
..++|++.+.||+|+||.||+|... +++.||||+++.. .......+..|..++..+ +||+|+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4578999999999999999999954 6889999999753 233456788899999988 7999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccc
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 598 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~ 598 (790)
+||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+||||+.++++||+|||+|+.
T Consensus 419 lV~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQ----QVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEeCcCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeec
Confidence 9999999999999994 2346999999999999999999999985 99999999999999999999999999985
Q ss_pred cCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccccc
Q 040908 599 DEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELV 678 (790)
Q Consensus 599 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 678 (790)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... ... ...
T Consensus 492 ~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~------~i~-~~~----- 558 (674)
T 3pfq_A 492 NIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ------SIM-EHN----- 558 (674)
T ss_dssp CCCTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHH-SSC-----
T ss_pred cccCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHH------HHH-hCC-----
Confidence 433222 2345779999999999999999999999999999999999999997654322111 101 111
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 040908 679 DPNLGSNVDKEQVRVMINVALLCADVSPTNRPLM-----SSVVS 717 (790)
Q Consensus 679 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~ev~~ 717 (790)
+ .++.....++.+++..||+.||.+||++ .||.+
T Consensus 559 ---~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 559 ---V--AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ---C--CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ---C--CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 0 1122234567889999999999999997 66653
No 217
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=341.55 Aligned_cols=260 Identities=25% Similarity=0.429 Sum_probs=199.1
Q ss_pred ccHHHHHHHhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhcc-CCCceeeeeeEEEe
Q 040908 436 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISAL-QHPHLVKLYGCCIE 513 (790)
Q Consensus 436 ~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 513 (790)
+++.++....++|++.+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 34444555678999999999999999999996 478999999986532 3456788999999999 89999999999987
Q ss_pred ------CCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCC
Q 040908 514 ------GNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN 587 (790)
Q Consensus 514 ------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~ 587 (790)
.+..++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~ 167 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAE 167 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCC
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCC
Confidence 468899999999999999995332 356899999999999999999999985 999999999999999999
Q ss_pred eEEeecCCccccCCCCcceeeccccCCCcccHHHhh-----cCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHH
Q 040908 588 PKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAM-----RGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLL 662 (790)
Q Consensus 588 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~ 662 (790)
+||+|||++........ ......||+.|+|||++. ...++.++|||||||++|||++|+.||..........
T Consensus 168 ~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-- 244 (326)
T 2x7f_A 168 VKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-- 244 (326)
T ss_dssp EEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--
T ss_pred EEEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH--
Confidence 99999999986543221 123456999999999987 5678999999999999999999999996543221110
Q ss_pred HHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 663 DWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 663 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. ......... ...+ ...+.+++..||+.||.+||++.|+++
T Consensus 245 ----~~-~~~~~~~~~----~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 245 ----LI-PRNPAPRLK----SKKW----SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp ----HH-HHSCCCCCS----CSCS----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ----Hh-hcCccccCC----cccc----CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 01 111111111 1112 346788999999999999999999987
No 218
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.7e-37 Score=331.51 Aligned_cols=252 Identities=26% Similarity=0.427 Sum_probs=192.5
Q ss_pred HhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEe---------
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIE--------- 513 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--------- 513 (790)
..++|++.+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 356899999999999999999995 47899999998643 3445678999999999999999999999865
Q ss_pred ----CCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeE
Q 040908 514 ----GNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPK 589 (790)
Q Consensus 514 ----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 589 (790)
.+..++||||+++|+|.+++.. ....+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHH---SCGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhc---cccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEE
Confidence 4578999999999999999942 2345788899999999999999999985 99999999999999999999
Q ss_pred EeecCCccccCCCC-------------cceeeccccCCCcccHHHhhcC-CCCChhhHHHHHHHHHHHHhCCCCCccccc
Q 040908 590 ISDFGLAKLDEEDN-------------THISTRVAGTFGYMAPEYAMRG-HLTDKADVYSFGIVALEIVSGRSNIMCKTK 655 (790)
Q Consensus 590 l~DFGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~elltG~~p~~~~~~ 655 (790)
|+|||+++...... ........||+.|+|||++.+. .++.++|||||||++|||++ |+.....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~ 233 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME 233 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh
Confidence 99999998654321 1122345689999999999864 78999999999999999998 4432111
Q ss_pred cchhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 656 EEKFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 656 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. ........ . .......++......+.+++..|++.||.+|||+.|+++
T Consensus 234 --~~---~~~~~~~~-~------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 234 --RV---NILKKLRS-V------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp --HH---HHHHHHHS-T------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --HH---HHHHhccc-c------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 11 11111110 0 111122233334456789999999999999999999976
No 219
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=9.3e-37 Score=331.13 Aligned_cols=262 Identities=19% Similarity=0.310 Sum_probs=202.3
Q ss_pred hcCcceeeeecccCcEEEEeeee--cCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCc------eeeeeeEEEeCCe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL--ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPH------LVKLYGCCIEGNQ 516 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~--~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~~ 516 (790)
.++|++.+.||+|+||.||+|.. .+++.||||++... ......+.+|+.+++.++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46899999999999999999985 36889999998653 233567889999999987664 9999999999999
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC------------
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK------------ 584 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~------------ 584 (790)
.++||||+ +++|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----
T ss_pred EEEEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCccc
Confidence 99999999 88999998432 2246889999999999999999999985 999999999999987
Q ss_pred -------CCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccc
Q 040908 585 -------DLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEE 657 (790)
Q Consensus 585 -------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~ 657 (790)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 241 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred cccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 6789999999998654322 34578999999999999999999999999999999999999997654332
Q ss_pred hhhHHHHHH-----HHHhhCCccccc---------------------CCCC-CCCCcHHHHHHHHHHHHHccCCCCCCCC
Q 040908 658 KFYLLDWAL-----LLKEQGNLMELV---------------------DPNL-GSNVDKEQVRVMINVALLCADVSPTNRP 710 (790)
Q Consensus 658 ~~~l~~~~~-----~~~~~~~~~~~~---------------------d~~l-~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 710 (790)
......... ............ .+.. ...........+.+++..||+.||.+||
T Consensus 242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 221111000 000000000000 0000 0011234567889999999999999999
Q ss_pred CHHHHHH
Q 040908 711 LMSSVVS 717 (790)
Q Consensus 711 t~~ev~~ 717 (790)
|+.|+++
T Consensus 322 t~~ell~ 328 (339)
T 1z57_A 322 TLREALK 328 (339)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999865
No 220
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.7e-37 Score=331.41 Aligned_cols=260 Identities=23% Similarity=0.394 Sum_probs=199.6
Q ss_pred cCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccch--hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK--QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 522 (790)
++|++.+.||+|+||.||+|... +|+.||||++..... .....+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 68999999999999999999965 689999999865432 234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCC
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 602 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~ 602 (790)
|+. ++|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~-~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 998 69999884322 245889999999999999999999985 999999999999999999999999999865432
Q ss_pred CcceeeccccCCCcccHHHhhcCC-CCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccc----
Q 040908 603 NTHISTRVAGTFGYMAPEYAMRGH-LTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMEL---- 677 (790)
Q Consensus 603 ~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~---- 677 (790)
.. ......||+.|+|||++.+.. ++.++|||||||++|||+||+.||......+.. .. .....+...+.
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~---~~~~~~~~~~~~~~~ 230 (299)
T 2r3i_A 157 VR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL--FR---IFRTLGTPDEVVWPG 230 (299)
T ss_dssp SB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HH---HHHHHCCCCTTTSTT
T ss_pred cc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHH--HH---HHHHhCCCchhhhhH
Confidence 21 123346899999999998765 789999999999999999999999765432211 11 11111111100
Q ss_pred ------cCCCCC----CCC---cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 678 ------VDPNLG----SNV---DKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 678 ------~d~~l~----~~~---~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..+... ..+ ......++.+++.+|++.||.+|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 001110 000 0012356789999999999999999999976
No 221
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.8e-38 Score=338.75 Aligned_cols=252 Identities=23% Similarity=0.340 Sum_probs=195.5
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccch--------hcHHHHHHHHHHhhccCCCceeeeeeEEEeC
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK--------QGNREFVNEIGTISALQHPHLVKLYGCCIEG 514 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 514 (790)
..++|++.+.||+|+||.||+|... +++.||||++..... .....+.+|+.++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4568999999999999999999864 588999999865321 1224588999999999999999999998765
Q ss_pred CeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCC---eEEe
Q 040908 515 NQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKIS 591 (790)
Q Consensus 515 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~ 591 (790)
+ .++||||+++++|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp S-EEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEEC
T ss_pred c-eEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEc
Confidence 5 8999999999999999843 346899999999999999999999985 999999999999987654 9999
Q ss_pred ecCCccccCCCCcceeeccccCCCcccHHHhh---cCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHH
Q 040908 592 DFGLAKLDEEDNTHISTRVAGTFGYMAPEYAM---RGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLL 668 (790)
Q Consensus 592 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~ 668 (790)
|||+++...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||........ +....
T Consensus 160 Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~--- 232 (322)
T 2ycf_A 160 DFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQI--- 232 (322)
T ss_dssp CCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHHHH---
T ss_pred cCccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHHHH---
Confidence 999998664322 223456999999999974 46788999999999999999999999975433221 11111
Q ss_pred HhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 669 KEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 669 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..+.... .+.. .......+.+++..|++.||.+||++.|+++
T Consensus 233 -~~~~~~~--~~~~----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 233 -TSGKYNF--IPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -HHTCCCC--CHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HhCcccc--Cchh----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1111100 0000 0112356789999999999999999999875
No 222
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=343.55 Aligned_cols=264 Identities=22% Similarity=0.377 Sum_probs=202.3
Q ss_pred HHHHHHHhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCC
Q 040908 438 LRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIEGN 515 (790)
Q Consensus 438 ~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 515 (790)
.++.+...++|++.+.||+|+||.||+|...+ .||+|++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 34444556889999999999999999998754 49999986542 223456788999999999999999999999999
Q ss_pred eEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCC
Q 040908 516 QLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 595 (790)
Q Consensus 516 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGl 595 (790)
..++||||+++++|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~ 175 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGL 175 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTS---SCCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSC
T ss_pred ceEEEeecccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCC
Confidence 99999999999999999943 2346899999999999999999999985 99999999999998 67999999999
Q ss_pred ccccCCCC----cceeeccccCCCcccHHHhhc---------CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHH
Q 040908 596 AKLDEEDN----THISTRVAGTFGYMAPEYAMR---------GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLL 662 (790)
Q Consensus 596 a~~~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~ 662 (790)
++...... ........||+.|+|||++.. ..++.++|||||||++|||++|+.||.........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--- 252 (319)
T 2y4i_B 176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII--- 252 (319)
T ss_dssp CC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH---
T ss_pred ccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---
Confidence 87543211 111223458999999999864 45788999999999999999999999754332211
Q ss_pred HHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 040908 663 DWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVGV 725 (790)
Q Consensus 663 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~~ 725 (790)
... ..+........ . ....+.+++..||+.+|.+|||+.+++++|+.....
T Consensus 253 ---~~~-~~~~~~~~~~~----~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 253 ---WQM-GTGMKPNLSQI----G----MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp ---HHH-HTTCCCCCCCS----S----CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred ---HHh-ccCCCCCCCcC----C----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 111 11111111111 1 123578899999999999999999999999987653
No 223
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=5.1e-37 Score=337.90 Aligned_cols=262 Identities=21% Similarity=0.311 Sum_probs=200.1
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeC-----Ce
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEG-----NQ 516 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~ 516 (790)
..++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3568999999999999999999854 68899999987533 23346789999999999999999999999754 36
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCc
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 596 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla 596 (790)
.++||||+. |+|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 105 ~~iv~e~~~-~~L~~~l~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp EEEEEECCS-EEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEcccC-cCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcce
Confidence 899999998 58999883 246899999999999999999999985 999999999999999999999999999
Q ss_pred cccCCCCcc--eeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCC
Q 040908 597 KLDEEDNTH--ISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGN 673 (790)
Q Consensus 597 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 673 (790)
+........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+. .. .....
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~-~~~~~ 252 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL--GI-LGSPS 252 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHH--HH-HCSCC
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHH--HH-hCCCC
Confidence 866433221 1234579999999998765 458999999999999999999999997654333221110 00 00000
Q ss_pred ---ccc--------ccCC-CCCCCCc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 674 ---LME--------LVDP-NLGSNVD-----KEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 674 ---~~~--------~~d~-~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
+.. .... ......+ ......+.+++..|++.||.+|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0000 0000000 112346789999999999999999999986
No 224
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=330.83 Aligned_cols=250 Identities=22% Similarity=0.289 Sum_probs=196.8
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc----hhcHHHHHHHHHHhhccCCCceeeeeeEEE--eCCeE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS----KQGNREFVNEIGTISALQHPHLVKLYGCCI--EGNQL 517 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~--~~~~~ 517 (790)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 47899999999999999999996 468899999997642 234567999999999999999999999984 45578
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
++||||++++ |.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999987 66666322 2356899999999999999999999985 9999999999999999999999999998
Q ss_pred ccCCCC-cceeeccccCCCcccHHHhhcCC--CCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCc
Q 040908 598 LDEEDN-THISTRVAGTFGYMAPEYAMRGH--LTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNL 674 (790)
Q Consensus 598 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 674 (790)
...... ........||+.|+|||++.+.. .+.++||||||+++|||++|+.||......+.. ... ..+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~i-~~~~~ 230 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLF------ENI-GKGSY 230 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH------HHH-HHCCC
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHH------HHH-hcCCC
Confidence 654322 22233466999999999997644 377999999999999999999999754322111 111 11111
Q ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 675 MELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 675 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..... ....+.+++.+|++.||.+||++.|+++
T Consensus 231 ------~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 231 ------AIPGD----CGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp ------CCCSS----SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ------CCCCc----cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11112 2346788999999999999999999986
No 225
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8e-38 Score=338.30 Aligned_cols=264 Identities=22% Similarity=0.379 Sum_probs=199.5
Q ss_pred HhcCcceeeeecccCcEEEEeeee--cCCcEEEEEEccccchh--cHHHHHHHHHHhhcc---CCCceeeeeeEEE----
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLL--ADGTLIAVKQLSAKSKQ--GNREFVNEIGTISAL---QHPHLVKLYGCCI---- 512 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~--~~g~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l---~H~niv~l~g~~~---- 512 (790)
+.++|++.+.||+|+||.||+|.. .+|+.||+|++...... ....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999996 46889999998654321 223566788777766 8999999999987
Q ss_pred -eCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEe
Q 040908 513 -EGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKIS 591 (790)
Q Consensus 513 -~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 591 (790)
.....++||||+. |+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEe
Confidence 4567899999998 69999984322 235899999999999999999999985 9999999999999999999999
Q ss_pred ecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhh
Q 040908 592 DFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQ 671 (790)
Q Consensus 592 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 671 (790)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .........
T Consensus 163 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~i~~~~~~~ 238 (326)
T 1blx_A 163 DFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG--KILDVIGLP 238 (326)
T ss_dssp SCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCCC
T ss_pred cCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH--HHHHHcCCC
Confidence 999998654322 2234568999999999999999999999999999999999999997654322111 100000000
Q ss_pred --CCccc-------ccCCC---CCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 672 --GNLME-------LVDPN---LGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 672 --~~~~~-------~~d~~---l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..... ..... ............+.+++.+||+.||.+||++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 00000 000111123456788999999999999999999975
No 226
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.8e-37 Score=338.95 Aligned_cols=270 Identities=20% Similarity=0.285 Sum_probs=191.8
Q ss_pred HHHHHHhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCe-
Q 040908 439 RQIKAATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQ- 516 (790)
Q Consensus 439 ~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~- 516 (790)
.......++|++.+.||+|+||.||+|... +|+.||||++.... .....+.+|+..++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455667789999999999999999999964 68999999885532 233456788888999999999999999976443
Q ss_pred ------EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhh--hcCCCcEEeccCCCCcEEecC-CCC
Q 040908 517 ------LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLH--EESRLKIVHRDIKATNVLLDK-DLN 587 (790)
Q Consensus 517 ------~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH--~~~~~~iiHrDlk~~NILl~~-~~~ 587 (790)
.++||||+++ +|.+.+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 7899999986 555444322223457899999999999999999999 66 5999999999999997 899
Q ss_pred eEEeecCCccccCCCCcceeeccccCCCcccHHHhhcCC-CCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHH
Q 040908 588 PKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGH-LTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWAL 666 (790)
Q Consensus 588 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~ 666 (790)
+||+|||+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......... ....
T Consensus 171 ~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~--~~~~ 246 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLH--EIVR 246 (360)
T ss_dssp EEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH
T ss_pred EEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHH--HHHH
Confidence 99999999986654332 23456899999999987654 8999999999999999999999997654332211 1111
Q ss_pred HH-----------HhhCCcccccCCC-C-----CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 667 LL-----------KEQGNLMELVDPN-L-----GSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 667 ~~-----------~~~~~~~~~~d~~-l-----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. ..........+.. . ...........+.+++..||+.||.+|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 247 VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00 0000000000000 0 00111124567899999999999999999999986
No 227
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.1e-37 Score=341.24 Aligned_cols=255 Identities=22% Similarity=0.359 Sum_probs=182.6
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEeC------C
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIEG------N 515 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~ 515 (790)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 47899999999999999999984 56899999998653 233456788999999999999999999998754 5
Q ss_pred eEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCC
Q 040908 516 QLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 595 (790)
Q Consensus 516 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGl 595 (790)
..++|+||+ +++|.+++.. ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccc
Confidence 679999999 6899988832 46899999999999999999999985 99999999999999999999999999
Q ss_pred ccccCCCCcceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCc
Q 040908 596 AKLDEEDNTHISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNL 674 (790)
Q Consensus 596 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 674 (790)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+ .. ..+..
T Consensus 179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i--~~---~~g~p 249 (367)
T 2fst_X 179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI--LR---LVGTP 249 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HH---HHCSC
T ss_pred ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HH---HhCCC
Confidence 9865432 234679999999999987 67899999999999999999999999765432221111 00 00000
Q ss_pred -cc------------ccC--CCC-CCCCc---HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 675 -ME------------LVD--PNL-GSNVD---KEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 675 -~~------------~~d--~~l-~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.+ .+. +.. ...+. ......+.+++.+|++.||.+|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 250 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp CHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00 000 000 00000 011346789999999999999999999986
No 228
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=8.5e-38 Score=347.83 Aligned_cols=261 Identities=23% Similarity=0.315 Sum_probs=194.2
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCe------EE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQ------LL 518 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~------~~ 518 (790)
..+|++.+.||+|+||.||+|....+..||+|++...... ..+|+.+++.++||||+++++++...+. .+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 3579999999999999999999877777999988543222 2369999999999999999999965433 78
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEec-CCCCeEEeecCCcc
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNPKISDFGLAK 597 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-~~~~~kl~DFGla~ 597 (790)
+||||++++.+. .+.........+++..+..++.||++||+|||+.+ |+||||||+|||++ .++.+||+|||+++
T Consensus 115 lv~e~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPETVYR-ASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSEEHHH-HHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCccHHH-HHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 999999875443 33221223457899999999999999999999985 99999999999999 79999999999998
Q ss_pred ccCCCCcceeeccccCCCcccHHHhhcC-CCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHH--------
Q 040908 598 LDEEDNTHISTRVAGTFGYMAPEYAMRG-HLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLL-------- 668 (790)
Q Consensus 598 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~-------- 668 (790)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+.. .......
T Consensus 191 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l--~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 191 ILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQL--VEIIKVLGTPSREQI 266 (394)
T ss_dssp ECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCHHHH
T ss_pred cccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHhCCCCHHHH
Confidence 7644332 2345789999999999765 5899999999999999999999999765433221 1111100
Q ss_pred -HhhCCcccccCCCCCCC-----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 669 -KEQGNLMELVDPNLGSN-----VDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 669 -~~~~~~~~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.......+..-+..... +......++.+++.+||+.||.+|||+.|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 00000000000111100 11123357889999999999999999999986
No 229
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.1e-36 Score=337.55 Aligned_cols=210 Identities=22% Similarity=0.290 Sum_probs=175.1
Q ss_pred cHHHHHHHhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccC-CC-----ceeeeee
Q 040908 437 TLRQIKAATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQ-HP-----HLVKLYG 509 (790)
Q Consensus 437 ~~~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~g 509 (790)
.+...+...++|++.+.||+|+||.||+|... +++.||||++... .....++..|+.++..++ |+ +|+++++
T Consensus 45 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~ 123 (382)
T 2vx3_A 45 IVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKR 123 (382)
T ss_dssp CCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEE
T ss_pred EeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeee
Confidence 33444455789999999999999999999854 6889999999753 233466778888888885 54 4999999
Q ss_pred EEEeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEec--CCCC
Q 040908 510 CCIEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLD--KDLN 587 (790)
Q Consensus 510 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~--~~~~ 587 (790)
++...+..++||||+. |+|.+++.... ...+++..+..++.|++.||+|||+. ..+|+||||||+|||++ .++.
T Consensus 124 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~ 199 (382)
T 2vx3_A 124 HFMFRNHLCLVFEMLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSA 199 (382)
T ss_dssp EEEETTEEEEEEECCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCC
T ss_pred eeccCCceEEEEecCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCc
Confidence 9999999999999996 59999985322 24589999999999999999999963 23699999999999994 5788
Q ss_pred eEEeecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccc
Q 040908 588 PKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTK 655 (790)
Q Consensus 588 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~ 655 (790)
+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 200 ~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 200 IKIVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp EEECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred EEEEeccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999999876432 2346789999999999999999999999999999999999999976543
No 230
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=332.23 Aligned_cols=264 Identities=22% Similarity=0.306 Sum_probs=193.7
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEE-----------
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCI----------- 512 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~----------- 512 (790)
.++|++.+.||+|+||.||+|... +|+.||+|++........+.+.+|+.++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 468999999999999999999965 48999999997766666778999999999999999999999873
Q ss_pred ---eCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEec-CCCCe
Q 040908 513 ---EGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNP 588 (790)
Q Consensus 513 ---~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-~~~~~ 588 (790)
+.+..++||||++ |+|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++ +++.+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLE-----QGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEE
T ss_pred cccccCceeEEeeccC-CCHHHHhh-----cCCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeE
Confidence 4467899999998 69999983 246899999999999999999999985 99999999999997 56799
Q ss_pred EEeecCCccccCCCCc--ceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHH
Q 040908 589 KISDFGLAKLDEEDNT--HISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWA 665 (790)
Q Consensus 589 kl~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~ 665 (790)
||+|||+++....... .......+|..|+|||.+.. ..++.++|||||||++|||++|+.||......+....+...
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 240 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES 240 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 9999999986543221 11233567999999998876 67899999999999999999999999765432211110000
Q ss_pred -------HHHHhhCCcccccCCCCC-CCC-----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 666 -------LLLKEQGNLMELVDPNLG-SNV-----DKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 666 -------~~~~~~~~~~~~~d~~l~-~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
........+...+..... ... .......+.+++..|++.||.+|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000000000000000000 000 0112456889999999999999999999976
No 231
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=344.77 Aligned_cols=204 Identities=26% Similarity=0.446 Sum_probs=155.7
Q ss_pred hcCcce-eeeecccCcEEEEeeeec---CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeEEEe--CCeEE
Q 040908 445 TNHFDV-ANKIGEGGFGPVYKGLLA---DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIE--GNQLL 518 (790)
Q Consensus 445 ~~~y~~-~~~LG~G~fG~Vy~g~~~---~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~ 518 (790)
.+.|++ .++||+|+||.||+|... +++.||||++.... ....+.+|+.++++++||||+++++++.. ....+
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 344665 458999999999999965 57889999996532 23568899999999999999999999965 67899
Q ss_pred EEEEeccCCChhhhhcCCc-----cccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe----cCCCCeE
Q 040908 519 LIYEYLENNSLARALFGPE-----EHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL----DKDLNPK 589 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl----~~~~~~k 589 (790)
+||||+.+ +|.+++.... .....+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+|
T Consensus 97 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEE
Confidence 99999975 7887773211 11235899999999999999999999985 9999999999999 7788999
Q ss_pred EeecCCccccCCCCc--ceeeccccCCCcccHHHhhcC-CCCChhhHHHHHHHHHHHHhCCCCCcccc
Q 040908 590 ISDFGLAKLDEEDNT--HISTRVAGTFGYMAPEYAMRG-HLTDKADVYSFGIVALEIVSGRSNIMCKT 654 (790)
Q Consensus 590 l~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~elltG~~p~~~~~ 654 (790)
|+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 999999986653221 222346799999999999874 58999999999999999999999997543
No 232
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.3e-37 Score=335.23 Aligned_cols=256 Identities=24% Similarity=0.376 Sum_probs=178.5
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc-hhcHHHHHHHHH-HhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS-KQGNREFVNEIG-TISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
.++|++.+.||+|+||.||+|... +|+.||||++.... ......+..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 368899999999999999999964 68999999987543 233445666666 777889999999999999999999999
Q ss_pred EeccCCChhhhhcCCc-cccCCCChhhHHHHHHHHHHHHHHhhhc-CCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 522 EYLENNSLARALFGPE-EHRLKLDWPTRHNICIGIARGLAYLHEE-SRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
||+++ +|.+++.... .....+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99985 7877763211 1135689999999999999999999997 5 999999999999999999999999999865
Q ss_pred CCCCcceeeccccCCCcccHHHh----hcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcc
Q 040908 600 EEDNTHISTRVAGTFGYMAPEYA----MRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLM 675 (790)
Q Consensus 600 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 675 (790)
..... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||........ ......
T Consensus 177 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----------~~~~~~ 243 (327)
T 3aln_A 177 VDSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----------QLTQVV 243 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------------CCCC
T ss_pred ccccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----------HHHHHh
Confidence 44322 2334699999999998 456789999999999999999999999964321100 000111
Q ss_pred cccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 676 ELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 676 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
....+.+...........+.+++..||+.||.+||++.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 244 KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 111111111111123456889999999999999999999976
No 233
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=7.5e-37 Score=337.51 Aligned_cols=254 Identities=20% Similarity=0.323 Sum_probs=195.1
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeE----
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQL---- 517 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~---- 517 (790)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 47899999999999999999985 468999999987542 23356788999999999999999999999876654
Q ss_pred --EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCC
Q 040908 518 --LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 595 (790)
Q Consensus 518 --~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGl 595 (790)
++||||+. ++|.+++. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999998 68888872 34899999999999999999999985 99999999999999999999999999
Q ss_pred ccccCCCCcceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCc
Q 040908 596 AKLDEEDNTHISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNL 674 (790)
Q Consensus 596 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 674 (790)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+.... ... ..+..
T Consensus 191 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~--i~~---~~~~~ 261 (371)
T 4exu_A 191 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ--ILK---VTGVP 261 (371)
T ss_dssp C------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH--HHH---HHCCC
T ss_pred ccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH--HHH---HhCCC
Confidence 9855432 234678999999999987 6889999999999999999999999976543221110 000 00000
Q ss_pred -cc---------------ccCCCCCCCC---cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 675 -ME---------------LVDPNLGSNV---DKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 675 -~~---------------~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.+ .+.......+ .......+.+++..|++.||.+|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 262 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00 0000000000 0112456889999999999999999999976
No 234
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.6e-37 Score=338.29 Aligned_cols=263 Identities=20% Similarity=0.324 Sum_probs=198.1
Q ss_pred HhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeC-----Ce
Q 040908 444 ATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEG-----NQ 516 (790)
Q Consensus 444 ~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~ 516 (790)
..++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.++++++||||+++++++... ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 3578999999999999999999964 68999999986533 33356788999999999999999999998754 67
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCc
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 596 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla 596 (790)
.++||||+. |+|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 89 ~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIS-----TQMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp EEEEECCCS-EEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccC-ccHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEecccc
Confidence 899999997 58999883 246899999999999999999999985 999999999999999999999999999
Q ss_pred cccCCCCcc---------eeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHH
Q 040908 597 KLDEEDNTH---------ISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWAL 666 (790)
Q Consensus 597 ~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~ 666 (790)
+........ ......||+.|+|||++.. ..++.++|||||||++|||++|+.||............ ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--~~ 237 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI--FG 237 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH--HH
Confidence 865432211 1123568999999998765 67899999999999999999999999765432211100 00
Q ss_pred HHHhhC---Ccc--------cccC--CCCCCC----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 667 LLKEQG---NLM--------ELVD--PNLGSN----VDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 667 ~~~~~~---~~~--------~~~d--~~l~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
...... ... +.+. +..... ........+.+++.+||+.||.+|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 000 0000 000000 00122356789999999999999999999986
No 235
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=9.8e-37 Score=343.62 Aligned_cols=253 Identities=25% Similarity=0.290 Sum_probs=188.2
Q ss_pred cCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEEEEEEec
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLLLIYEYL 524 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~ 524 (790)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.++.++ +|||||++++++.+.+..++||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 445667899999999998766667999999998643 235678899999887 8999999999999999999999999
Q ss_pred cCCChhhhhcCCccccCC---CChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCC-------------CCe
Q 040908 525 ENNSLARALFGPEEHRLK---LDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKD-------------LNP 588 (790)
Q Consensus 525 ~~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~-------------~~~ 588 (790)
. |+|.+++......... .++..++.++.||+.||+|||+.+ |+||||||+|||++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 6999999644322111 244567889999999999999985 9999999999999754 489
Q ss_pred EEeecCCccccCCCCcc---eeeccccCCCcccHHHhhc-------CCCCChhhHHHHHHHHHHHHh-CCCCCccccccc
Q 040908 589 KISDFGLAKLDEEDNTH---ISTRVAGTFGYMAPEYAMR-------GHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEE 657 (790)
Q Consensus 589 kl~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~ 657 (790)
||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 99999999876543322 1234579999999999975 678999999999999999999 999996443221
Q ss_pred hhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 658 KFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 658 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
. . ........ +............++.+++.+|++.||.+|||+.||++
T Consensus 248 ~-~------i~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 S-N------IIRGIFSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp H-H------HHHTCCCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H-H------HhcCCCCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1 0 00111111 11111224456678999999999999999999999875
No 236
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.1e-36 Score=323.56 Aligned_cols=253 Identities=23% Similarity=0.353 Sum_probs=202.4
Q ss_pred HHHhcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEE
Q 040908 442 KAATNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLL 518 (790)
Q Consensus 442 ~~~~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 518 (790)
....++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++...+..+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 345678999999999999999999965 68999999986542 234677999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCC---CCeEEeecCC
Q 040908 519 LIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKD---LNPKISDFGL 595 (790)
Q Consensus 519 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~---~~~kl~DFGl 595 (790)
+||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.+ +.+||+|||+
T Consensus 98 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~ 170 (287)
T 2wei_A 98 IVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGL 170 (287)
T ss_dssp EEECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred EEEEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCc
Confidence 99999999999998832 346899999999999999999999985 9999999999999754 4799999999
Q ss_pred ccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcc
Q 040908 596 AKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLM 675 (790)
Q Consensus 596 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 675 (790)
++....... .....||+.|+|||.+.+ .++.++||||||+++|||++|+.||......+. .... ..+...
T Consensus 171 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------~~~~-~~~~~~ 240 (287)
T 2wei_A 171 STCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI------LKRV-ETGKYA 240 (287)
T ss_dssp GGTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHH-HHCCCC
T ss_pred ceeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHH------HHHH-HcCCCC
Confidence 986544322 123458999999998865 589999999999999999999999975432211 1111 111111
Q ss_pred cccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 676 ELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 676 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
... + ... .....+.+++..|++.||.+|||+.|+++
T Consensus 241 ~~~-~-~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 241 FDL-P-QWR----TISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCS-G-GGT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCc-h-hhh----hcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 000 0 001 12346788999999999999999999987
No 237
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.4e-36 Score=328.19 Aligned_cols=262 Identities=19% Similarity=0.305 Sum_probs=199.4
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CC-cEEEEEEccccchhcHHHHHHHHHHhhccCCCc------eeeeeeEEEeCCe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DG-TLIAVKQLSAKSKQGNREFVNEIGTISALQHPH------LVKLYGCCIEGNQ 516 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g-~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~~ 516 (790)
.++|++.+.||+|+||.||+|... ++ +.||+|++... ......+.+|+.++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 578999999999999999999853 34 78999999653 233567888999999998766 8999999999999
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEe--------------
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLL-------------- 582 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl-------------- 582 (790)
.++||||+ +++|.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred EEEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeccccccccccccc
Confidence 99999999 66777776322 2246899999999999999999999885 9999999999999
Q ss_pred -----cCCCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccc
Q 040908 583 -----DKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEE 657 (790)
Q Consensus 583 -----~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~ 657 (790)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 678899999999998654322 34579999999999999999999999999999999999999997654332
Q ss_pred hhhHHHHHH-----HHHhhCCccc-ccCCCC---------------------CCCCcHHHHHHHHHHHHHccCCCCCCCC
Q 040908 658 KFYLLDWAL-----LLKEQGNLME-LVDPNL---------------------GSNVDKEQVRVMINVALLCADVSPTNRP 710 (790)
Q Consensus 658 ~~~l~~~~~-----~~~~~~~~~~-~~d~~l---------------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 710 (790)
......... .......... ...... .......+...+.+++..||+.||.+||
T Consensus 247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 211111000 0000000000 000000 0011223456788999999999999999
Q ss_pred CHHHHHH
Q 040908 711 LMSSVVS 717 (790)
Q Consensus 711 t~~ev~~ 717 (790)
|+.|+++
T Consensus 327 t~~e~l~ 333 (355)
T 2eu9_A 327 TLAEALL 333 (355)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999864
No 238
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1e-36 Score=336.08 Aligned_cols=263 Identities=21% Similarity=0.274 Sum_probs=198.7
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHhhccC-----------CCceeeeeeEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTISALQ-----------HPHLVKLYGCCI 512 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~g~~~ 512 (790)
.++|++.+.||+|+||.||+|.. .+++.||||++... ......+.+|+.++++++ |+||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 36899999999999999999995 57899999998743 233567889999998886 899999999998
Q ss_pred eCC----eEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEec-----
Q 040908 513 EGN----QLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLD----- 583 (790)
Q Consensus 513 ~~~----~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~----- 583 (790)
..+ ..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+.+ +|+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCC
Confidence 654 789999999 889999984322 245899999999999999999999972 399999999999995
Q ss_pred -CCCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHH
Q 040908 584 -KDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLL 662 (790)
Q Consensus 584 -~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~ 662 (790)
..+.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||+||+.||............
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TTEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred cCcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 34479999999998665432 3356899999999999999999999999999999999999999754321110000
Q ss_pred H-HHHHHHhhCCcc--------------------cccCC-C---------CCCCCcHHHHHHHHHHHHHccCCCCCCCCC
Q 040908 663 D-WALLLKEQGNLM--------------------ELVDP-N---------LGSNVDKEQVRVMINVALLCADVSPTNRPL 711 (790)
Q Consensus 663 ~-~~~~~~~~~~~~--------------------~~~d~-~---------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt 711 (790)
+ ........+.+. ..+.. . -...++......+.+++..||+.||.+|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 0 000000001000 00000 0 011345567788999999999999999999
Q ss_pred HHHHHH
Q 040908 712 MSSVVS 717 (790)
Q Consensus 712 ~~ev~~ 717 (790)
+.|+++
T Consensus 328 ~~ell~ 333 (373)
T 1q8y_A 328 AGGLVN 333 (373)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 999976
No 239
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=7.9e-37 Score=334.82 Aligned_cols=256 Identities=20% Similarity=0.326 Sum_probs=195.0
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccc--hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCe-----
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKS--KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQ----- 516 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----- 516 (790)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 46899999999999999999995 468999999986532 2334678899999999999999999999987653
Q ss_pred -EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCC
Q 040908 517 -LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 595 (790)
Q Consensus 517 -~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGl 595 (790)
.++||||+. ++|.+++. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999998 58888772 24899999999999999999999985 99999999999999999999999999
Q ss_pred ccccCCCCcceeeccccCCCcccHHHhhc-CCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhh---
Q 040908 596 AKLDEEDNTHISTRVAGTFGYMAPEYAMR-GHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQ--- 671 (790)
Q Consensus 596 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--- 671 (790)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+.... ........
T Consensus 173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~--i~~~~~~~~~~ 246 (353)
T 3coi_A 173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ--ILKVTGVPGTE 246 (353)
T ss_dssp TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHH--HHHHHCBCCHH
T ss_pred ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHHHhCCCCHH
Confidence 9865432 234568999999999987 6789999999999999999999999976543221110 00000000
Q ss_pred --------------CCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 672 --------------GNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 672 --------------~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..+.....+.. ..........+.+++.+|++.||.+|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 247 FVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHTTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000001 0111223457889999999999999999999976
No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=330.99 Aligned_cols=245 Identities=22% Similarity=0.359 Sum_probs=189.9
Q ss_pred HHHHHhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchh------cHHHHHHHHHHhhcc----CCCceeeee
Q 040908 440 QIKAATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQ------GNREFVNEIGTISAL----QHPHLVKLY 508 (790)
Q Consensus 440 ~~~~~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l----~H~niv~l~ 508 (790)
+.+...++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3445568899999999999999999985 46889999999654321 223456799999988 899999999
Q ss_pred eEEEeCCeEEEEEEe-ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEec-CCC
Q 040908 509 GCCIEGNQLLLIYEY-LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLD-KDL 586 (790)
Q Consensus 509 g~~~~~~~~~lV~Ey-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-~~~ 586 (790)
+++...+..++|||| +.+++|.+++.. ...+++..+..++.||++||+|||+.+ |+||||||+||+++ .++
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~ 177 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRG 177 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTT
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCC
Confidence 999998999999999 789999999942 346899999999999999999999985 99999999999999 889
Q ss_pred CeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcCCCC-ChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHH
Q 040908 587 NPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLT-DKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWA 665 (790)
Q Consensus 587 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~ 665 (790)
.+||+|||+++...... .....||..|+|||++.+..+. .++|||||||++|||++|+.||.....
T Consensus 178 ~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---------- 244 (312)
T 2iwi_A 178 CAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE---------- 244 (312)
T ss_dssp EEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------
T ss_pred eEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH----------
Confidence 99999999998765432 2345699999999999877664 489999999999999999999864210
Q ss_pred HHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 666 LLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 666 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.. .... .... .....+.+++..||+.||.+||++.|+++
T Consensus 245 -~~--~~~~------~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 245 -IL--EAEL------HFPA----HVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -HH--HTCC------CCCT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -Hh--hhcc------CCcc----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 0000 1111 22346788999999999999999999986
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.4e-37 Score=334.37 Aligned_cols=245 Identities=22% Similarity=0.374 Sum_probs=198.2
Q ss_pred HHHHHhcCcceeeeecccCcEEEEeeee-cCCcEEEEEEccccchh------cHHHHHHHHHHhhccC--CCceeeeeeE
Q 040908 440 QIKAATNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQ------GNREFVNEIGTISALQ--HPHLVKLYGC 510 (790)
Q Consensus 440 ~~~~~~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~--H~niv~l~g~ 510 (790)
+.+...++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++++++ |+||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 3344567899999999999999999984 57899999998654321 1245678999999996 5999999999
Q ss_pred EEeCCeEEEEEEeccC-CChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEec-CCCCe
Q 040908 511 CIEGNQLLLIYEYLEN-NSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNP 588 (790)
Q Consensus 511 ~~~~~~~~lV~Ey~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~-~~~~~ 588 (790)
+...+..++||||+.+ ++|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++ +++.+
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~ 189 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFIT----ERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL 189 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEE
T ss_pred EecCCcEEEEEEcCCCCccHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCE
Confidence 9999999999999986 89999983 2356899999999999999999999985 99999999999999 78899
Q ss_pred EEeecCCccccCCCCcceeeccccCCCcccHHHhhcCCC-CChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHH
Q 040908 589 KISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHL-TDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALL 667 (790)
Q Consensus 589 kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~ 667 (790)
||+|||+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... .
T Consensus 190 kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----------~ 255 (320)
T 3a99_A 190 KLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----------I 255 (320)
T ss_dssp EECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----------H
T ss_pred EEeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-----------h
Confidence 999999998765432 234569999999999987765 6789999999999999999999964211 0
Q ss_pred HHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 668 LKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 668 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
..+.. . ....+ ..++.+++.+||+.||.+||++.|+++
T Consensus 256 --~~~~~--~----~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 256 --IRGQV--F----FRQRV----SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp --HHCCC--C----CSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --hcccc--c----ccccC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00110 0 11122 346788999999999999999999976
No 242
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.7e-36 Score=329.99 Aligned_cols=258 Identities=21% Similarity=0.267 Sum_probs=174.9
Q ss_pred HhcCcceee-eecccCcEEEEeeeec-CCcEEEEEEccccchhcHHHHHHHH-HHhhccCCCceeeeeeEEEe----CCe
Q 040908 444 ATNHFDVAN-KIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEI-GTISALQHPHLVKLYGCCIE----GNQ 516 (790)
Q Consensus 444 ~~~~y~~~~-~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~-~~l~~l~H~niv~l~g~~~~----~~~ 516 (790)
..++|.+.+ .||+|+||.||+|... +|+.||||++.... ...+|+ ..++.++||||+++++++.. ...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 357899855 6999999999999965 68999999986431 122333 34566799999999999876 455
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC---CCCeEEeec
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKISDF 593 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~DF 593 (790)
.++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+||
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred EEEEEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEecc
Confidence 899999999999999995432 246899999999999999999999985 999999999999976 455999999
Q ss_pred CCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCC
Q 040908 594 GLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGN 673 (790)
Q Consensus 594 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 673 (790)
|+++...... .....||+.|+|||++....++.++|||||||++|||++|+.||........... .... ...+
T Consensus 176 g~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~-~~~~- 248 (336)
T 3fhr_A 176 GFAKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG--MKRR-IRLG- 248 (336)
T ss_dssp TTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred ccceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh--HHHh-hhcc-
Confidence 9998654322 2345689999999999888889999999999999999999999965432221000 0000 0000
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcCc
Q 040908 674 LMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS--MLEGRV 723 (790)
Q Consensus 674 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~--~L~~~~ 723 (790)
.. .............+.+++..|++.||.+|||+.|+++ .+....
T Consensus 249 --~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 295 (336)
T 3fhr_A 249 --QY---GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM 295 (336)
T ss_dssp -------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred --cc---ccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence 00 0000111123456788999999999999999999998 555543
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3.8e-36 Score=323.84 Aligned_cols=252 Identities=23% Similarity=0.349 Sum_probs=177.7
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccch-hcH-HHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK-QGN-REFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~-~~~-~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 521 (790)
.++|++.+.||+|+||.||+|... +|+.||||++..... ... +.+.++..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467899999999999999999964 689999999865432 222 33445556788889999999999999999999999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCC
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 601 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~ 601 (790)
||+ ++.+..+.. .....+++..+..++.|+++||+|||+.. +|+||||||+|||++.++.+||+|||+++....
T Consensus 104 e~~-~~~~~~l~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 104 ELM-GTCAEKLKK---RMQGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp CCC-SEEHHHHHH---HHTSCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecc-CCcHHHHHH---HhccCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 999 445544442 22356899999999999999999999851 399999999999999999999999999976544
Q ss_pred CCcceeeccccCCCcccHHHhh-----cCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 602 DNTHISTRVAGTFGYMAPEYAM-----RGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 602 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
... .....||+.|+|||++. ...++.++|||||||++|||++|+.||........ . +... .. +...
T Consensus 178 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~--~~~~-~~-~~~~- 248 (318)
T 2dyl_A 178 DKA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE--V--LTKV-LQ-EEPP- 248 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH--H--HHHH-HH-SCCC-
T ss_pred Ccc--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH--H--HHHH-hc-cCCC-
Confidence 322 23456999999999994 55788999999999999999999999975322111 1 1111 11 1111
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
.... .......+.+++..||+.||.+||++.|+++
T Consensus 249 ----~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 249 ----LLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp ----CCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----CCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1110 0012346788999999999999999999876
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=337.41 Aligned_cols=249 Identities=21% Similarity=0.276 Sum_probs=186.5
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEEEEEEe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLLLIYEY 523 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey 523 (790)
..+|++.+.||+|+||+||.....+|+.||||++..... ..+.+|+.+++++ +|||||++++++.+.+..++||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 456889999999999996655555789999999865332 2356799999999 899999999999999999999999
Q ss_pred ccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC-----CCCeEEeecCCccc
Q 040908 524 LENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK-----DLNPKISDFGLAKL 598 (790)
Q Consensus 524 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~-----~~~~kl~DFGla~~ 598 (790)
+. |+|.+++... .....+..+..++.||+.||+|||+.+ |+||||||+|||++. ...+||+|||+++.
T Consensus 100 ~~-g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 100 CA-ATLQEYVEQK---DFAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp CS-EEHHHHHHSS---SCCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred CC-CCHHHHHHhc---CCCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 97 5999999533 234566677899999999999999985 999999999999943 34688999999986
Q ss_pred cCCCCc--ceeeccccCCCcccHHHhh---cCCCCChhhHHHHHHHHHHHHh-CCCCCccccccchhhHHHHHHHHHhhC
Q 040908 599 DEEDNT--HISTRVAGTFGYMAPEYAM---RGHLTDKADVYSFGIVALEIVS-GRSNIMCKTKEEKFYLLDWALLLKEQG 672 (790)
Q Consensus 599 ~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~ 672 (790)
...... .......||+.|+|||++. ...++.++|||||||++|||+| |+.||........ .......
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~-------~~~~~~~ 245 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA-------NILLGAC 245 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH-------HHHTTCC
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH-------HHHhccC
Confidence 654321 2234467999999999997 4567889999999999999999 8888854322111 0111111
Q ss_pred CcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 673 NLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 673 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
. .... .........+.+++..||+.||.+|||+.||++
T Consensus 246 ~-~~~~------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 246 S-LDCL------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp C-CTTS------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C-cccc------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1 1111 111234456788999999999999999999984
No 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.6e-35 Score=349.41 Aligned_cols=238 Identities=21% Similarity=0.307 Sum_probs=192.2
Q ss_pred hcCcceeeeecccCcEEEEeeeec--CCcEEEEEEccccc-hhcHHHHHHHHHHhhccCCCceeeeeeEEEeCCe-----
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA--DGTLIAVKQLSAKS-KQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQ----- 516 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~--~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----- 516 (790)
.++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 478999999999999999999964 68999999986532 3345678999999999999999999999987655
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCc
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 596 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla 596 (790)
.++||||+++++|.+++. ..++|..++.++.||+.||+|||+.+ |+||||||+|||++.+ .+||+|||++
T Consensus 159 ~~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eEEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccc
Confidence 799999999999998773 26899999999999999999999985 9999999999999986 8999999999
Q ss_pred cccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCccc
Q 040908 597 KLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLME 676 (790)
Q Consensus 597 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 676 (790)
+..... ....||+.|+|||++.++. +.++|||||||++|||++|..|+....... +
T Consensus 229 ~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----------------~-- 284 (681)
T 2pzi_A 229 SRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG----------------L-- 284 (681)
T ss_dssp EETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS----------------C--
T ss_pred hhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc----------------c--
Confidence 866543 3456999999999987754 889999999999999999988875321110 0
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHhc
Q 040908 677 LVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPL-MSSVVSMLEG 721 (790)
Q Consensus 677 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~ev~~~L~~ 721 (790)
............+.+++.+||+.||.+||+ +.++...|.+
T Consensus 285 -----~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 285 -----PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp -----CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred -----cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 000111123356889999999999999995 5566655544
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.4e-36 Score=348.24 Aligned_cols=259 Identities=24% Similarity=0.340 Sum_probs=197.9
Q ss_pred hcCcceeeeecccCcEEEEeeee-cCCcEEEEEEcccc-chhcHHHHHHHHHHhhccCCCceeeeeeEEEe------CCe
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLL-ADGTLIAVKQLSAK-SKQGNREFVNEIGTISALQHPHLVKLYGCCIE------GNQ 516 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~------~~~ 516 (790)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36899999999999999999996 46899999998754 33445679999999999999999999998765 667
Q ss_pred EEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCC---eEEeec
Q 040908 517 LLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKISDF 593 (790)
Q Consensus 517 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~DF 593 (790)
.++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccc
Confidence 8999999999999999964322 246899999999999999999999985 999999999999997765 899999
Q ss_pred CCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhh--
Q 040908 594 GLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQ-- 671 (790)
Q Consensus 594 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~-- 671 (790)
|+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..|.......
T Consensus 169 G~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~ 241 (676)
T 3qa8_A 169 GYAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSN 241 (676)
T ss_dssp CCCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC----
T ss_pred ccccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccc
Confidence 99987654332 24467999999999999999999999999999999999999999653211 1111100000
Q ss_pred --CCcccccCC--------CCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 040908 672 --GNLMELVDP--------NLGSNVDKEQVRVMINVALLCADVSPTNRPLMSS 714 (790)
Q Consensus 672 --~~~~~~~d~--------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e 714 (790)
....+.... .............+.+++..|++.||.+|||+.|
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e 294 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ 294 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence 000111110 1112234456778999999999999999999976
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.2e-34 Score=308.03 Aligned_cols=230 Identities=10% Similarity=0.043 Sum_probs=182.6
Q ss_pred hcCcceeeeecccCcEEEEeeeec-CCcEEEEEEccccch---hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK---QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
.++|++.+.||+|+||.||+|... +|+.||||++..... ...+.|.+|+.++.+++||||+++++++.+.+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 367999999999999999999965 589999999976432 2346799999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++++|.+++.. .....++.+|+.|++.||+|||+.+ |+||||||+|||++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~------~~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADT------SPSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EECCCEEEHHHHHTT------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEecCCCCHHHHHhc------CCChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc------
Confidence 999999999999932 1345578889999999999999985 9999999999999999999998543
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDP 680 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 680 (790)
|++ .++.++|||||||++|||+||+.||.......... .....+..
T Consensus 175 ---------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~------------~~~~~~~~ 220 (286)
T 3uqc_A 175 ---------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA------------PAERDTAG 220 (286)
T ss_dssp ---------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE------------ECCBCTTS
T ss_pred ---------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH------------HHHHHhcc
Confidence 333 36889999999999999999999997654322110 00000000
Q ss_pred CCC--CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 040908 681 NLG--SNVDKEQVRVMINVALLCADVSPTNRPLMSSVVSMLEGRVG 724 (790)
Q Consensus 681 ~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~~L~~~~~ 724 (790)
... ..........+.+++.+||+.||.+| |+.|+++.|+....
T Consensus 221 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 221 QPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp CBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred CCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 000 00011223568899999999999999 99999999987654
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-35 Score=330.47 Aligned_cols=243 Identities=13% Similarity=0.092 Sum_probs=179.9
Q ss_pred hcCcceeeeecccCcEEEEeee-ecCCcEEEEEEccccch---hcHHHHHHHHHHhhccCC-Cceee-------------
Q 040908 445 TNHFDVANKIGEGGFGPVYKGL-LADGTLIAVKQLSAKSK---QGNREFVNEIGTISALQH-PHLVK------------- 506 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~-~~~g~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H-~niv~------------- 506 (790)
+.+|...+.||+|+||.||+|. ..+|+.||||++..... ...+.|.+|+.+++.++| +|...
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 4567888999999999999999 45789999999874322 235679999999999987 32211
Q ss_pred --e------eeEEEe-----CCeEEEEEEeccCCChhhhhcCC---ccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcE
Q 040908 507 --L------YGCCIE-----GNQLLLIYEYLENNSLARALFGP---EEHRLKLDWPTRHNICIGIARGLAYLHEESRLKI 570 (790)
Q Consensus 507 --l------~g~~~~-----~~~~~lV~Ey~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~i 570 (790)
+ ..++.. ....+++|++ .+++|.+++... ......++|..++.++.||++||+|||+.+ |
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 232 (413)
T ss_dssp EECCC---------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred cccCCCCccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence 1 111111 1235666665 468999888311 112345788999999999999999999985 9
Q ss_pred EeccCCCCcEEecCCCCeEEeecCCccccCCCCcceeeccccCCCcccHHHh----------hcCCCCChhhHHHHHHHH
Q 040908 571 VHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYA----------MRGHLTDKADVYSFGIVA 640 (790)
Q Consensus 571 iHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~s~ksDV~S~Gvvl 640 (790)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 99999999999999999999999999865432 344567 999999999 445578899999999999
Q ss_pred HHHHhCCCCCccccccchhhHHHHHHHHHhhCCcccccCCCCCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040908 641 LEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLMELVDPNLGSNVDKEQVRVMINVALLCADVSPTNRPLMSSVVS 717 (790)
Q Consensus 641 ~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~ 717 (790)
|||+||+.||......+.. ..++... ..+ ...+.+++..||+.||.+||++.|+++
T Consensus 308 ~elltg~~Pf~~~~~~~~~---------------~~~~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGGS---------------EWIFRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHSSCCCCTTGGGSCS---------------GGGGSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHCCCCCCCcchhhhH---------------HHHHhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999999999754322211 1111100 122 256888999999999999999888754
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.1e-33 Score=302.58 Aligned_cols=233 Identities=19% Similarity=0.263 Sum_probs=179.9
Q ss_pred hcCccee-eeecccCcEEEEeeee-cCCcEEEEEEccccchhcHHHHHHHHHHh-hccCCCceeeeeeEEEe----CCeE
Q 040908 445 TNHFDVA-NKIGEGGFGPVYKGLL-ADGTLIAVKQLSAKSKQGNREFVNEIGTI-SALQHPHLVKLYGCCIE----GNQL 517 (790)
Q Consensus 445 ~~~y~~~-~~LG~G~fG~Vy~g~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~----~~~~ 517 (790)
.++|.+. +.||+|+||.||+|.. .+++.||+|++.. ...+.+|+.++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3567777 7899999999999985 5689999999853 24567888888 55699999999999987 6778
Q ss_pred EEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC---CCCeEEeecC
Q 040908 518 LLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKISDFG 594 (790)
Q Consensus 518 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~DFG 594 (790)
++||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 9999999999999999532 2246899999999999999999999985 999999999999998 7899999999
Q ss_pred CccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCccccccchhhHHHHHHHHHhhCCc
Q 040908 595 LAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNL 674 (790)
Q Consensus 595 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 674 (790)
+++.... ..++.++|||||||++|||+||+.||......... ...
T Consensus 166 ~a~~~~~-----------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~------------~~~ 210 (299)
T 3m2w_A 166 FAKETTG-----------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------------PGM 210 (299)
T ss_dssp TCEECTT-----------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------------CCS
T ss_pred ccccccc-----------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh------------HHH
Confidence 9874331 24577999999999999999999999654321100 001
Q ss_pred ccccCCCCCCCCcH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcCc
Q 040908 675 MELVDPNLGSNVDK----EQVRVMINVALLCADVSPTNRPLMSSVVS--MLEGRV 723 (790)
Q Consensus 675 ~~~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~ev~~--~L~~~~ 723 (790)
...+... ....+. .....+.+++..||+.||.+|||+.|+++ .+....
T Consensus 211 ~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 211 KTRIRMG-QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp CCSSCTT-CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred HHHHhhc-cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 1111000 001111 23457889999999999999999999987 454433
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.1e-34 Score=315.42 Aligned_cols=240 Identities=19% Similarity=0.216 Sum_probs=183.2
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccc--------hhcHHHHHHHHHHhhccC---------CCceeee
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKS--------KQGNREFVNEIGTISALQ---------HPHLVKL 507 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~---------H~niv~l 507 (790)
.++|++.+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|+.+++.++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788999999999999999998 68999999997542 222377889999998886 7777777
Q ss_pred eeEEE-----------------e-------------CCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHH
Q 040908 508 YGCCI-----------------E-------------GNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIAR 557 (790)
Q Consensus 508 ~g~~~-----------------~-------------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~ 557 (790)
.+.+. + .+..++||||+++|++.+.+.. ..+++..+..++.||+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHH
Confidence 66543 2 6789999999999987776622 45899999999999999
Q ss_pred HHHHhh-hcCCCcEEeccCCCCcEEecCCC--------------------CeEEeecCCccccCCCCcceeeccccCCCc
Q 040908 558 GLAYLH-EESRLKIVHRDIKATNVLLDKDL--------------------NPKISDFGLAKLDEEDNTHISTRVAGTFGY 616 (790)
Q Consensus 558 aL~yLH-~~~~~~iiHrDlk~~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y 616 (790)
||+||| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...||+.|
T Consensus 173 aL~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y 243 (336)
T 2vuw_A 173 SLAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVS 243 (336)
T ss_dssp HHHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCT
T ss_pred HHHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecc
Confidence 999999 775 99999999999999887 8999999999866432 24699999
Q ss_pred ccHHHhhcCCCCChhhHHHHHHH-HHHHHhCCCCCccccccchhhHHHHHHHHHhhCCcc-c-ccCCCCCCCCcHHHHHH
Q 040908 617 MAPEYAMRGHLTDKADVYSFGIV-ALEIVSGRSNIMCKTKEEKFYLLDWALLLKEQGNLM-E-LVDPNLGSNVDKEQVRV 693 (790)
Q Consensus 617 ~aPE~~~~~~~s~ksDV~S~Gvv-l~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~-~-~~d~~l~~~~~~~~~~~ 693 (790)
+|||++.+.. +.++||||+|++ .+++++|..||... .|...... .+. . ................+
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV---------LWLHYLTD--KMLKQMTFKTKCNTPAMKQIKRK 311 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH---------HHHHHHHH--HHHHTCCCSSCCCSHHHHHHHHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch---------hhhhHHHH--hhhhhhccCcccchhhhhhcCHH
Confidence 9999998665 889999998777 77888899887421 12111100 000 0 00111111123356778
Q ss_pred HHHHHHHccCCCCCCCCCHHHHH
Q 040908 694 MINVALLCADVSPTNRPLMSSVV 716 (790)
Q Consensus 694 l~~l~~~Cl~~dP~~RPt~~ev~ 716 (790)
+.+++.+|++.| |+.|++
T Consensus 312 ~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHhccC-----CHHHHH
Confidence 999999999966 888886
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1e-28 Score=286.23 Aligned_cols=185 Identities=18% Similarity=0.130 Sum_probs=129.5
Q ss_pred eecccCcEEEEeee-ecCCcEEEEEEccccc----------hhcHHHHHHHHHHhhcc-CCCceeeeeeEEEeCCeEEEE
Q 040908 453 KIGEGGFGPVYKGL-LADGTLIAVKQLSAKS----------KQGNREFVNEIGTISAL-QHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 453 ~LG~G~fG~Vy~g~-~~~g~~vAvK~~~~~~----------~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 520 (790)
..+.|++|.+..++ .--|+.+|||++.... ....++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 46677777776655 3357889999986431 22345799999999999 799999999999999999999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||++|++|.++|.. ..+++. .+|+.||+.||+|+|+++ ||||||||+||||++++++||+|||+|+...
T Consensus 321 MEyv~G~~L~d~i~~----~~~l~~---~~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA----GEEIDR---EKILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EECCCSEEHHHHHHT----TCCCCH---HHHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EecCCCCcHHHHHHh----CCCCCH---HHHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 999999999999943 234554 358999999999999986 9999999999999999999999999998765
Q ss_pred CCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCC
Q 040908 601 EDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSN 649 (790)
Q Consensus 601 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p 649 (790)
.... .....+||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 391 ~~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 391 QDCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 4332 2344679999999999865 567789999999998887766544
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=8.2e-26 Score=260.50 Aligned_cols=184 Identities=17% Similarity=0.198 Sum_probs=144.7
Q ss_pred ceeeeecccCcEEEEeeeecCCcEEEEEEccccch--------hcHHHHHHHHHHhhccCCCceeeeeeEEEeCCeEEEE
Q 040908 449 DVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSK--------QGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLI 520 (790)
Q Consensus 449 ~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 520 (790)
...+.||+|+||.||+|.. .++.+++|+...... ...+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467899999999999965 467788887643211 1134589999999999999999777777788888999
Q ss_pred EEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccC
Q 040908 521 YEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 600 (790)
Q Consensus 521 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~ 600 (790)
|||+++++|.+++.. +..++.|+++||+|||+.+ |+||||||+|||++. ++||+|||+++...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999942 4579999999999999985 999999999999999 99999999999765
Q ss_pred CCCcce------eeccccCCCcccHHHhhc--CCCCChhhHHHHHHHHHHHHhCCCCC
Q 040908 601 EDNTHI------STRVAGTFGYMAPEYAMR--GHLTDKADVYSFGIVALEIVSGRSNI 650 (790)
Q Consensus 601 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~s~ksDV~S~Gvvl~elltG~~p~ 650 (790)
...... .....||+.|||||++.. ..|+.++|+|+..+-.++-+.++.++
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 432211 234679999999999976 56788899999999998888777655
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=1.4e-22 Score=214.28 Aligned_cols=152 Identities=18% Similarity=0.101 Sum_probs=122.9
Q ss_pred HHHHHHhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccch------------------hcHHHHHHHHHHhhccC
Q 040908 439 RQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSK------------------QGNREFVNEIGTISALQ 500 (790)
Q Consensus 439 ~~~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~------------------~~~~~~~~E~~~l~~l~ 500 (790)
..+......|++.+.||+|+||.||+|...+|+.||+|+++.... .....+.+|+.++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344445566888899999999999999997799999999864321 12456899999999999
Q ss_pred CCceeeeeeEEEeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcE
Q 040908 501 HPHLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNV 580 (790)
Q Consensus 501 H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NI 580 (790)
| +++.+++.. +..++||||+++|+|.+ +. ......++.|++.||+|||+.+ |+||||||+||
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~----------~~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NI 224 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VR----------VENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNV 224 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CC----------CSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cc----------hhhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHE
Confidence 5 777776544 55699999999999988 51 1234579999999999999885 99999999999
Q ss_pred EecCCCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhh
Q 040908 581 LLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAM 623 (790)
Q Consensus 581 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 623 (790)
|++ ++.+||+|||+|+. +..|+|||++.
T Consensus 225 Ll~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp EEE-TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred EEE-CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 999 99999999999872 34578999874
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.83 E-value=9.6e-21 Score=228.37 Aligned_cols=168 Identities=21% Similarity=0.254 Sum_probs=103.1
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|+|++|+|+|.+|..|+++++|+.|+|++|++++..|. +|+.|++++|.+....+..+.. ++|+.|+|++|
T Consensus 469 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 548 (768)
T 3rgz_A 469 ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548 (768)
T ss_dssp CEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSS
T ss_pred eEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCC
Confidence 3566667777666666666666666666666666655543 4566666666665444444444 56666666666
Q ss_pred cccccCCccc----------------------------------------------------------------------
Q 040908 74 NLTGELPHFL---------------------------------------------------------------------- 83 (790)
Q Consensus 74 ~l~~~~p~~~---------------------------------------------------------------------- 83 (790)
+++|.+|..+
T Consensus 549 ~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~ 628 (768)
T 3rgz_A 549 LFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 628 (768)
T ss_dssp EEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSC
T ss_pred ccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhh
Confidence 6665555432
Q ss_pred cCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCCCCCCccee
Q 040908 84 GEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQNGAVNL 162 (790)
Q Consensus 84 ~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~~~l~~ 162 (790)
+++++|+.|||++|+|+|.+|.+|++|++|+.|+|++|+++|.+|..+.. ++|+.|||++|+|+|.+|..+..++.|+.
T Consensus 629 ~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~ 708 (768)
T 3rgz_A 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTE 708 (768)
T ss_dssp SSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSE
T ss_pred hccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCE
Confidence 22345666666666666666666666666666666666666666666655 56666666666666666666666666666
Q ss_pred eecCCC
Q 040908 163 FASSSK 168 (790)
Q Consensus 163 ~~~~~~ 168 (790)
++.+.+
T Consensus 709 L~ls~N 714 (768)
T 3rgz_A 709 IDLSNN 714 (768)
T ss_dssp EECCSS
T ss_pred EECcCC
Confidence 666544
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.83 E-value=1.5e-20 Score=226.80 Aligned_cols=103 Identities=24% Similarity=0.250 Sum_probs=48.7
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEecccc
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCN 74 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~ 74 (790)
+|+|++|+++|.+|..|+.+++|+.|++++|++++..|. +|+.|++++|.+....+..+.. ++|+.|+|++|+
T Consensus 446 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 525 (768)
T 3rgz_A 446 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNS 525 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCc
Confidence 344555555544555455555555555555554443332 3444444444444333333332 445555555555
Q ss_pred ccccCCccccCCCCCCEEEccCCcCCcCcc
Q 040908 75 LTGELPHFLGEVSEMKVLDLSFNKLNGTIP 104 (790)
Q Consensus 75 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip 104 (790)
++|.+|..++++++|++|+|++|+++|.+|
T Consensus 526 l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip 555 (768)
T 3rgz_A 526 FSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555 (768)
T ss_dssp CEEECCGGGGGCTTCCEEECCSSEEESBCC
T ss_pred ccCcCCHHHcCCCCCCEEECCCCccCCcCC
Confidence 554555555555555555555554444444
No 256
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.80 E-value=7.4e-20 Score=196.56 Aligned_cols=168 Identities=20% Similarity=0.216 Sum_probs=152.7
Q ss_pred EEEccCCcCcc--cCChhhhcccccCcccccC-ccccccccc------cccceeccccCCCCCCCccccc-CcccEEEec
Q 040908 2 YRTVQSNRLSG--ELPEELGSLIHSGKWFGWA-NSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILR 71 (790)
Q Consensus 2 ~L~Ls~N~l~g--~iP~~~~~L~~L~~L~l~~-N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~ 71 (790)
.|+|++|+|+| .+|..|+++++|++|++++ |.+.+..|. +|+.|++++|.+....+..+.. ++|++|+|+
T Consensus 54 ~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls 133 (313)
T 1ogq_A 54 NLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFS 133 (313)
T ss_dssp EEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECC
T ss_pred EEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCC
Confidence 69999999999 9999999999999999995 999877764 7889999999998555555555 899999999
Q ss_pred cccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCC-CCcEEEeeCCcccccCCccccCCCCcEEeccCCccccCC
Q 040908 72 SCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLA-DVDFIYLTGNLLTGKVPQWMFGRGPENIDLSYNNFADES 150 (790)
Q Consensus 72 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~-~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ls~N~l~g~~ 150 (790)
+|+|++.+|..|+++++|++|+|++|+++|.+|..+.+++ +|+.|+|++|++++.+|..+....|+.|+|++|++++.+
T Consensus 134 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~ 213 (313)
T 1ogq_A 134 YNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDA 213 (313)
T ss_dssp SSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECC
T ss_pred CCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcC
Confidence 9999999999999999999999999999999999999998 999999999999999999888856999999999999999
Q ss_pred CCCCCCCCcceeeecCCCC
Q 040908 151 SGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 151 p~~~~~~~~l~~~~~~~~~ 169 (790)
|..+..++.|+.++.+.+.
T Consensus 214 ~~~~~~l~~L~~L~L~~N~ 232 (313)
T 1ogq_A 214 SVLFGSDKNTQKIHLAKNS 232 (313)
T ss_dssp GGGCCTTSCCSEEECCSSE
T ss_pred CHHHhcCCCCCEEECCCCc
Confidence 9999999999999887653
No 257
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.80 E-value=8.2e-20 Score=196.21 Aligned_cols=167 Identities=20% Similarity=0.300 Sum_probs=126.9
Q ss_pred CEEEccC-CcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEecc
Q 040908 1 MYRTVQS-NRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRS 72 (790)
Q Consensus 1 ~~L~Ls~-N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~ 72 (790)
++|+|++ |++++.+|..|+++++|++|+|++|.+++..|. +|+.|++++|.+....+..+.. ++|++|+|++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 4688884 888888888888888888888888888766553 6777788888777555555554 7788888888
Q ss_pred ccccccCCccccCCC-CCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCC
Q 040908 73 CNLTGELPHFLGEVS-EMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADES 150 (790)
Q Consensus 73 N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~ 150 (790)
|+|+|.+|..+++++ +|++|+|++|+++|.+|..|..++ |+.|+|++|++++.+|..+.. ++|+.|+|++|++++.+
T Consensus 159 N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (313)
T 1ogq_A 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG
T ss_pred CcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeec
Confidence 888888888888887 788888888888878888887776 888888888887777776666 77777777777777666
Q ss_pred CCCCCCCCcceeeecCCCC
Q 040908 151 SGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 151 p~~~~~~~~l~~~~~~~~~ 169 (790)
|. +..+++|+.++.+.+.
T Consensus 238 ~~-~~~l~~L~~L~Ls~N~ 255 (313)
T 1ogq_A 238 GK-VGLSKNLNGLDLRNNR 255 (313)
T ss_dssp GG-CCCCTTCCEEECCSSC
T ss_pred Cc-ccccCCCCEEECcCCc
Confidence 55 6666777777776553
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.79 E-value=3.8e-19 Score=192.28 Aligned_cols=166 Identities=14% Similarity=0.086 Sum_probs=145.9
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc-----ccccceeccccCCCCCCCcccc----------cCcc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS-----ESLTDLRISDLNGPEATLPDLR----------NRTF 65 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~-----~~L~~L~l~~n~~~~~~~~~~~----------~~~L 65 (790)
++|+|++|+|+ .+|..|+++++|++|+|++|.++..++ .+|+.|++++|+.....+..+. .++|
T Consensus 107 ~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L 185 (328)
T 4fcg_A 107 QHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNL 185 (328)
T ss_dssp SEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTC
T ss_pred CEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCC
Confidence 58999999999 999999999999999999999985433 2788999999776655444332 4889
Q ss_pred cEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCC
Q 040908 66 KNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYN 144 (790)
Q Consensus 66 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N 144 (790)
++|+|++|+|+ .+|..++++++|++|+|++|+++ .+|..+.++++|+.|+|++|++.+.+|..+.. ++|+.|+|++|
T Consensus 186 ~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n 263 (328)
T 4fcg_A 186 QSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDC 263 (328)
T ss_dssp CEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTC
T ss_pred CEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCC
Confidence 99999999999 89999999999999999999999 57778999999999999999999999998877 89999999999
Q ss_pred ccccCCCCCCCCCCcceeeecCCCC
Q 040908 145 NFADESSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 145 ~l~g~~p~~~~~~~~l~~~~~~~~~ 169 (790)
++.+.+|..+..+++|+.++.+.+.
T Consensus 264 ~~~~~~p~~~~~l~~L~~L~L~~n~ 288 (328)
T 4fcg_A 264 SNLLTLPLDIHRLTQLEKLDLRGCV 288 (328)
T ss_dssp TTCCBCCTTGGGCTTCCEEECTTCT
T ss_pred CchhhcchhhhcCCCCCEEeCCCCC
Confidence 9999999999999999999988653
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.79 E-value=5.4e-19 Score=191.07 Aligned_cols=165 Identities=15% Similarity=0.176 Sum_probs=146.9
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc-----ccccceeccccCCCCCCCccccc-CcccEEEecccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS-----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCN 74 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~-----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~ 74 (790)
+.|+|++|+|+ .+|..+++|++|++|+|++|.++..+. .+|+.|++++|.+...+. .+.. ++|++|+|++|+
T Consensus 84 ~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~lp~-~l~~l~~L~~L~L~~n~ 161 (328)
T 4fcg_A 84 VALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRALPA-SIASLNRLRELSIRACP 161 (328)
T ss_dssp CEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCCCG-GGGGCTTCCEEEEEEET
T ss_pred eEEEccCCCch-hcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccCcH-HHhcCcCCCEEECCCCC
Confidence 47999999999 999999999999999999999994433 389999999999985543 4444 899999999999
Q ss_pred ccccCCccccC---------CCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCC
Q 040908 75 LTGELPHFLGE---------VSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYN 144 (790)
Q Consensus 75 l~~~~p~~~~~---------l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N 144 (790)
+.+.+|..++. +++|++|+|++|+|+ .+|..+.++++|+.|+|++|++++ +|..+.. ++|+.|+|++|
T Consensus 162 ~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n 239 (328)
T 4fcg_A 162 ELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGC 239 (328)
T ss_dssp TCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTC
T ss_pred CccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCC
Confidence 99999998765 999999999999999 999999999999999999999996 5555655 89999999999
Q ss_pred ccccCCCCCCCCCCcceeeecCCCC
Q 040908 145 NFADESSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 145 ~l~g~~p~~~~~~~~l~~~~~~~~~ 169 (790)
++.+.+|..+..+.+|+.++.+.+.
T Consensus 240 ~~~~~~p~~~~~l~~L~~L~L~~n~ 264 (328)
T 4fcg_A 240 TALRNYPPIFGGRAPLKRLILKDCS 264 (328)
T ss_dssp TTCCBCCCCTTCCCCCCEEECTTCT
T ss_pred cchhhhHHHhcCCCCCCEEECCCCC
Confidence 9999999999999999999998753
No 260
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.77 E-value=2.8e-18 Score=180.02 Aligned_cols=166 Identities=16% Similarity=0.156 Sum_probs=95.0
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCCCCCccccc-CcccEEEecccc
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCN 74 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~ 74 (790)
+|+|++|+|++..|..|.++++|++|+|++|.++..++ .+|+.|++++|.+...+...+.. ++|++|+|++|+
T Consensus 41 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 120 (270)
T 2o6q_A 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQ 120 (270)
T ss_dssp EEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSC
T ss_pred EEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCc
Confidence 45666666664333456666666666666666654433 24556666666665555444443 556666666666
Q ss_pred ccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCC
Q 040908 75 LTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGS 153 (790)
Q Consensus 75 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~ 153 (790)
|++..|..|+++++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..+.. ++|+.|+|++|+|++..+..
T Consensus 121 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 200 (270)
T 2o6q_A 121 LKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGA 200 (270)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred cCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHH
Confidence 66555555566666666666666666443444566666666666666666554444444 55666666666666555555
Q ss_pred CCCCCcceeeecCC
Q 040908 154 DCQNGAVNLFASSS 167 (790)
Q Consensus 154 ~~~~~~l~~~~~~~ 167 (790)
+..+..|+.++.+.
T Consensus 201 ~~~l~~L~~L~l~~ 214 (270)
T 2o6q_A 201 FDSLEKLKMLQLQE 214 (270)
T ss_dssp TTTCTTCCEEECCS
T ss_pred hccccCCCEEEecC
Confidence 55555555555543
No 261
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.77 E-value=2.9e-18 Score=181.29 Aligned_cols=169 Identities=16% Similarity=0.161 Sum_probs=147.2
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccC-CCCCCCccccc-CcccEEEecc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLN-GPEATLPDLRN-RTFKNLILRS 72 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~-~~~~~~~~~~~-~~L~~L~L~~ 72 (790)
++|+|++|+|++..|..|.++++|+.|++++|.+++..+ .+|+.|++++|. +.......+.. ++|++|+|++
T Consensus 35 ~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~ 114 (285)
T 1ozn_A 35 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDR 114 (285)
T ss_dssp SEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTT
T ss_pred eEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCC
Confidence 479999999997666789999999999999999987755 378899999997 77666666665 8999999999
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCC
Q 040908 73 CNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESS 151 (790)
Q Consensus 73 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p 151 (790)
|++++..|..|.++++|++|+|++|++++..+..|.++++|+.|+|++|++++..+..+.. ++|+.|+|++|++++..|
T Consensus 115 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 194 (285)
T 1ozn_A 115 CGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 194 (285)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCH
Confidence 9999888889999999999999999999766677999999999999999999777766766 899999999999999999
Q ss_pred CCCCCCCcceeeecCCCC
Q 040908 152 GSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~ 169 (790)
..+..+++|+.++.+.+.
T Consensus 195 ~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 195 HAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp TTTTTCTTCCEEECCSSC
T ss_pred hHccCcccccEeeCCCCc
Confidence 999999999999887663
No 262
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=1.4e-18 Score=181.14 Aligned_cols=137 Identities=18% Similarity=0.157 Sum_probs=106.7
Q ss_pred CcceeeeecccCcEEEEeeee-cCCcE--EEEEEccccchh------------------------cHHHHHHHHHHhhcc
Q 040908 447 HFDVANKIGEGGFGPVYKGLL-ADGTL--IAVKQLSAKSKQ------------------------GNREFVNEIGTISAL 499 (790)
Q Consensus 447 ~y~~~~~LG~G~fG~Vy~g~~-~~g~~--vAvK~~~~~~~~------------------------~~~~~~~E~~~l~~l 499 (790)
-|++.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|+..+.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367889999999999999997 68888 999986532111 113688999999999
Q ss_pred CCCce--eeeeeEEEeCCeEEEEEEeccC-C----ChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhh-hcCCCcEE
Q 040908 500 QHPHL--VKLYGCCIEGNQLLLIYEYLEN-N----SLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLH-EESRLKIV 571 (790)
Q Consensus 500 ~H~ni--v~l~g~~~~~~~~~lV~Ey~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH-~~~~~~ii 571 (790)
+|+++ ..++++ +..++||||+.+ | +|.++.. ..++..+..++.|++.||+||| +.+ |+
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~~g---iv 193 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR-------ELKELDVEGIFNDVVENVKRLYQEAE---LV 193 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG-------GGGGSCHHHHHHHHHHHHHHHHHTSC---EE
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh-------ccChHHHHHHHHHHHHHHHHHHHHCC---EE
Confidence 98865 333332 356899999953 4 5655541 1235677899999999999999 764 99
Q ss_pred eccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 572 HRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 572 HrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
||||||+|||+++ .++|+|||+|...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999998 9999999999754
No 263
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.76 E-value=6e-18 Score=175.55 Aligned_cols=166 Identities=15% Similarity=0.088 Sum_probs=143.4
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
.++++++|.++ .+|..+. ++|+.|+|++|.+++..+ .+|+.|++++|.+...+...+.. ++|++|+|++|
T Consensus 17 ~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 93 (251)
T 3m19_A 17 KEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANN 93 (251)
T ss_dssp TEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred eEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCC
Confidence 36899999998 8888766 689999999999987765 37888999999998877776666 89999999999
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCC
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSG 152 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~ 152 (790)
+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..+.. ++|+.|+|++|+|++..+.
T Consensus 94 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 94 QLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH
Confidence 999777788899999999999999999666667899999999999999999877767766 8999999999999988888
Q ss_pred CCCCCCcceeeecCCCC
Q 040908 153 SDCQNGAVNLFASSSKG 169 (790)
Q Consensus 153 ~~~~~~~l~~~~~~~~~ 169 (790)
.+..++.|+.++.+.+.
T Consensus 174 ~~~~l~~L~~L~l~~N~ 190 (251)
T 3m19_A 174 AFDRLGKLQTITLFGNQ 190 (251)
T ss_dssp TTTTCTTCCEEECCSCC
T ss_pred HHhCCCCCCEEEeeCCc
Confidence 89899999999886553
No 264
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.76 E-value=4.9e-18 Score=180.22 Aligned_cols=164 Identities=15% Similarity=-0.009 Sum_probs=98.1
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCcccccCcccEEEeccccccc
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTG 77 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~ 77 (790)
+|+|++|+|++..|..|..+++|+.|+|++|.+++..+ .+|+.|++++|.+...+......++|++|+|++|+|++
T Consensus 35 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~ 114 (290)
T 1p9a_G 35 ILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTS 114 (290)
T ss_dssp EEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCC
T ss_pred EEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCCCCCCcCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCcc
Confidence 56666666665555566666666666666666665433 35666666666666444322222566666666666665
Q ss_pred cCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCCCC
Q 040908 78 ELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQ 156 (790)
Q Consensus 78 ~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~ 156 (790)
..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+.. ++|+.|+|++|+|+ .+|..+..
T Consensus 115 l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~ 193 (290)
T 1p9a_G 115 LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFG 193 (290)
T ss_dssp CCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTT
T ss_pred cCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcc
Confidence 54556666666666666666666544455666666666666666666444444443 56666666666666 45555555
Q ss_pred CCcceeeecC
Q 040908 157 NGAVNLFASS 166 (790)
Q Consensus 157 ~~~l~~~~~~ 166 (790)
...|+.+..+
T Consensus 194 ~~~L~~l~L~ 203 (290)
T 1p9a_G 194 SHLLPFAFLH 203 (290)
T ss_dssp TCCCSEEECC
T ss_pred cccCCeEEeC
Confidence 5555555544
No 265
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.76 E-value=2.8e-18 Score=181.42 Aligned_cols=168 Identities=15% Similarity=0.069 Sum_probs=149.8
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcc-cccccc------ccccceeccccCCCCCCCccccc-CcccEEEecc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANS-VWHYFS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRS 72 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~-l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~ 72 (790)
++|+|++|+|++..|..|..+++|+.|++++|. +....+ .+|+.|++++|.+.......+.. ++|++|+|++
T Consensus 59 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 138 (285)
T 1ozn_A 59 TILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 138 (285)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCC
Confidence 579999999998889999999999999999997 776644 37999999999999887777765 8999999999
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCC
Q 040908 73 CNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESS 151 (790)
Q Consensus 73 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p 151 (790)
|++++..+..|+++++|++|+|++|++++..+..|.++++|+.|+|++|++++..|..+.. ++|+.|+|++|+|++..+
T Consensus 139 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 218 (285)
T 1ozn_A 139 NALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPT 218 (285)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCH
T ss_pred CcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCH
Confidence 9999777777999999999999999999666667999999999999999999998988877 899999999999998777
Q ss_pred CCCCCCCcceeeecCCC
Q 040908 152 GSDCQNGAVNLFASSSK 168 (790)
Q Consensus 152 ~~~~~~~~l~~~~~~~~ 168 (790)
..+..++.|+.++.+.+
T Consensus 219 ~~~~~l~~L~~L~l~~N 235 (285)
T 1ozn_A 219 EALAPLRALQYLRLNDN 235 (285)
T ss_dssp HHHTTCTTCCEEECCSS
T ss_pred HHcccCcccCEEeccCC
Confidence 77888999999888655
No 266
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.75 E-value=6e-18 Score=175.52 Aligned_cols=149 Identities=17% Similarity=0.101 Sum_probs=134.2
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|+|++|+|++..|..|.++++|+.|+|++|.+++..+. +|+.|++++|.+...+...+.. ++|++|+|++|
T Consensus 38 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 117 (251)
T 3m19_A 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCC
Confidence 4799999999988888899999999999999999987663 7999999999999888777766 89999999999
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccC
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADE 149 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~ 149 (790)
+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|..+.. ++|+.|+|++|++++.
T Consensus 118 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 118 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 999766777899999999999999999766668999999999999999999888877766 8999999999999864
No 267
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.74 E-value=2e-17 Score=173.81 Aligned_cols=166 Identities=13% Similarity=0.077 Sum_probs=145.4
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
+.|++++|.++ .++ .+..+++|+.|++++|.+++... .+|+.|++++|.+...+...+.. ++|++|+|++|+|
T Consensus 44 ~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 121 (272)
T 3rfs_A 44 DQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQL 121 (272)
T ss_dssp CEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCCCGGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred eeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCCchhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcC
Confidence 46899999998 555 58999999999999999987532 38999999999998877766665 8999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSD 154 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~ 154 (790)
++..|..|+++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|..+.. ++|+.|+|++|+|++..|..+
T Consensus 122 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 201 (272)
T 3rfs_A 122 QSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVF 201 (272)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTT
T ss_pred CccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHH
Confidence 9777778999999999999999999777777899999999999999999887777666 899999999999999888888
Q ss_pred CCCCcceeeecCCC
Q 040908 155 CQNGAVNLFASSSK 168 (790)
Q Consensus 155 ~~~~~l~~~~~~~~ 168 (790)
..++.|+.++.+.+
T Consensus 202 ~~l~~L~~L~l~~N 215 (272)
T 3rfs_A 202 DRLTSLQYIWLHDN 215 (272)
T ss_dssp TTCTTCCEEECCSS
T ss_pred hCCcCCCEEEccCC
Confidence 99999999988765
No 268
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.74 E-value=4.9e-18 Score=181.43 Aligned_cols=170 Identities=18% Similarity=0.121 Sum_probs=135.3
Q ss_pred CEEEccCCcCc--ccCChhhhcccccCcccccCcccccccc-----ccccceeccccCCCCCCC-ccccc-CcccEEEec
Q 040908 1 MYRTVQSNRLS--GELPEELGSLIHSGKWFGWANSVWHYFS-----ESLTDLRISDLNGPEATL-PDLRN-RTFKNLILR 71 (790)
Q Consensus 1 ~~L~Ls~N~l~--g~iP~~~~~L~~L~~L~l~~N~l~~~~~-----~~L~~L~l~~n~~~~~~~-~~~~~-~~L~~L~L~ 71 (790)
++|+|++|+|+ +.+|..+..+++|++|++++|.+...++ .+|+.|++++|.+...+. ..+.. ++|++|+|+
T Consensus 55 ~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~ 134 (306)
T 2z66_A 55 TKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS 134 (306)
T ss_dssp SEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECT
T ss_pred CEEECCCCccCcccCcccccccccccCEEECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECC
Confidence 47889999887 3347778888889999999988876543 378888888888776654 34444 788888888
Q ss_pred cccccccCCccccCCCCCCEEEccCCcCCc-CcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccC
Q 040908 72 SCNLTGELPHFLGEVSEMKVLDLSFNKLNG-TIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADE 149 (790)
Q Consensus 72 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~ 149 (790)
+|++++..|..|.++++|++|+|++|++++ .+|..+..+++|+.|+|++|++++..|..+.. ++|+.|+|++|++++.
T Consensus 135 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 214 (306)
T 2z66_A 135 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 214 (306)
T ss_dssp TSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBC
T ss_pred CCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCcc
Confidence 888888888888888888888888888876 57888888888888888888888877777766 7888888888888887
Q ss_pred CCCCCCCCCcceeeecCCCCC
Q 040908 150 SSGSDCQNGAVNLFASSSKGS 170 (790)
Q Consensus 150 ~p~~~~~~~~l~~~~~~~~~~ 170 (790)
.+..+..+.+|+.++.+.+..
T Consensus 215 ~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 215 DTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp CSGGGTTCTTCCEEECTTSCC
T ss_pred ChhhccCcccCCEeECCCCCC
Confidence 777778888888888876643
No 269
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.73 E-value=1.3e-17 Score=175.54 Aligned_cols=168 Identities=15% Similarity=0.095 Sum_probs=135.4
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|+|++|+|++..+..|.++++|+.|++++|.++...+ .+|+.|++++|.+...+...+.. ++|++|+|++|
T Consensus 31 ~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 110 (276)
T 2z62_A 31 KNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110 (276)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCC
Confidence 479999999996666689999999999999999987665 37888999999888777666665 88999999999
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCc-CcchhccCCCCCcEEEeeCCcccccCCccccC-CCCc----EEeccCCccc
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNG-TIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPE----NIDLSYNNFA 147 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~----~l~ls~N~l~ 147 (790)
++++..+..++++++|++|+|++|++++ .+|..|.++++|+.|+|++|++++..+..+.. .+|+ .|+|++|+++
T Consensus 111 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~ 190 (276)
T 2z62_A 111 NLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 190 (276)
T ss_dssp CCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCC
T ss_pred CccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCccc
Confidence 9997767689999999999999999986 36889999999999999999998877666654 4555 7888888887
Q ss_pred cCCCCCCCCCCcceeeecCCCC
Q 040908 148 DESSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 148 g~~p~~~~~~~~l~~~~~~~~~ 169 (790)
+..+..+.. .+|+.++.+.+.
T Consensus 191 ~~~~~~~~~-~~L~~L~L~~n~ 211 (276)
T 2z62_A 191 FIQPGAFKE-IRLKELALDTNQ 211 (276)
T ss_dssp EECTTSSCS-CCEEEEECCSSC
T ss_pred ccCccccCC-CcccEEECCCCc
Confidence 665555443 367777776553
No 270
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.72 E-value=9.8e-18 Score=168.61 Aligned_cols=143 Identities=17% Similarity=0.082 Sum_probs=76.0
Q ss_pred EEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 3 RTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 3 L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
+++++|.++ .+|..+ .++|++|++++|.+++..+ .+|+.|++++|.+...+...+.. ++|++|+|++|+|
T Consensus 12 v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 88 (208)
T 2o6s_A 12 VECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQL 88 (208)
T ss_dssp EECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcC
Confidence 455555555 455433 2355555555555554333 14555555555555444443333 5566666666666
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCcccc
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFAD 148 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g 148 (790)
++..+..|+++++|++|+|++|+|++..+..|.++++|+.|+|++|++++..+..+.. ++|+.|+|++|++++
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 89 QSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 5444444555666666666666665444444555666666666666665544443443 556666666665543
No 271
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.71 E-value=5.4e-17 Score=170.49 Aligned_cols=149 Identities=17% Similarity=0.137 Sum_probs=132.6
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|+|++|+|++ + +.++.+++|++|+|++|.+++..+ .+|+.|++++|.+...+...+.. ++|++|+|++|
T Consensus 66 ~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 143 (272)
T 3rfs_A 66 RYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHN 143 (272)
T ss_dssp CEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCC
Confidence 579999999995 4 479999999999999999997765 37899999999999887776665 89999999999
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCC
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESS 151 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p 151 (790)
+|++..|..|+++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|..+.. ++|+.|+|++|++++..|
T Consensus 144 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 144 QLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 999777778899999999999999999777777899999999999999999988877766 899999999999986544
No 272
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.71 E-value=7.5e-17 Score=169.16 Aligned_cols=166 Identities=14% Similarity=0.125 Sum_probs=146.7
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
..+++++|+|+ .+|..+. ++|+.|+|++|.++...+ .+|+.|++++|.+...+...+.. ++|++|+|++|
T Consensus 19 ~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n 95 (270)
T 2o6q_A 19 NSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDN 95 (270)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSS
T ss_pred CEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCC
Confidence 36899999999 7898665 689999999999997765 37899999999999887777665 89999999999
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCC
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSG 152 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~ 152 (790)
+|++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..+.. ++|+.|+|++|++++..+.
T Consensus 96 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 175 (270)
T 2o6q_A 96 KLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEG 175 (270)
T ss_dssp CCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChh
Confidence 999766778899999999999999999877888999999999999999999877766666 8999999999999998888
Q ss_pred CCCCCCcceeeecCCCC
Q 040908 153 SDCQNGAVNLFASSSKG 169 (790)
Q Consensus 153 ~~~~~~~l~~~~~~~~~ 169 (790)
.+..+++|+.++.+.+.
T Consensus 176 ~~~~l~~L~~L~L~~N~ 192 (270)
T 2o6q_A 176 AFDKLTELKTLKLDNNQ 192 (270)
T ss_dssp TTTTCTTCCEEECCSSC
T ss_pred HhccCCCcCEEECCCCc
Confidence 89999999999987663
No 273
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.71 E-value=4.2e-17 Score=184.12 Aligned_cols=108 Identities=19% Similarity=0.161 Sum_probs=95.9
Q ss_pred CcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEec
Q 040908 63 RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDL 141 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~l 141 (790)
++|+.|+|++|++++.+|..|+++++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..+.. ++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 46888888888888888999999999999999999999888889999999999999999998888887776 88999999
Q ss_pred cCCccccCCCCCCCCCCcceeeecCCCCC
Q 040908 142 SYNNFADESSGSDCQNGAVNLFASSSKGS 170 (790)
Q Consensus 142 s~N~l~g~~p~~~~~~~~l~~~~~~~~~~ 170 (790)
++|++++..|..+..+++|+.++.+.+.-
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l 383 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQL 383 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCCcccccChhhccccccccEEECCCCcc
Confidence 99999998899999999999999877643
No 274
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.71 E-value=5.7e-17 Score=164.73 Aligned_cols=147 Identities=13% Similarity=0.115 Sum_probs=116.0
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCccccccccccccceeccccCCCCCCCcccccCcccEEEeccccccccCCc
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELPH 81 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~ 81 (790)
.+++++|+|+ .+|..+. ++|+.|+|++|.|+...+..+..+ ++|+.|+|++|+|++..|.
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l-----------------~~L~~L~Ls~N~i~~~~~~ 74 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPY-----------------KKLRRIDLSNNQISELAPD 74 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTC-----------------TTCCEEECCSSCCCEECTT
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCC-----------------CCCCEEECCCCcCCCcCHH
Confidence 5788888888 7887664 577788888887776665544443 5788888888888877788
Q ss_pred cccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCCCCCCcc
Q 040908 82 FLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQNGAV 160 (790)
Q Consensus 82 ~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~~~l 160 (790)
.|.++++|++|+|++|+|++..+..|.++++|+.|+|++|++++..|..+.. ++|+.|+|++|+|++..+..+..+..|
T Consensus 75 ~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 154 (220)
T 2v9t_B 75 AFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAI 154 (220)
T ss_dssp TTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred HhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCC
Confidence 8888888888888888888544455788888888888888888887877766 788888888888888877778888888
Q ss_pred eeeecCCC
Q 040908 161 NLFASSSK 168 (790)
Q Consensus 161 ~~~~~~~~ 168 (790)
..++.+.+
T Consensus 155 ~~L~L~~N 162 (220)
T 2v9t_B 155 QTMHLAQN 162 (220)
T ss_dssp CEEECCSS
T ss_pred CEEEeCCC
Confidence 88777544
No 275
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.71 E-value=2.1e-17 Score=176.48 Aligned_cols=169 Identities=18% Similarity=0.144 Sum_probs=147.0
Q ss_pred CEEEccCCcCcccCChh-hhcccccCcccccCccccccc--------cccccceeccccCCCCCCCcccccCcccEEEec
Q 040908 1 MYRTVQSNRLSGELPEE-LGSLIHSGKWFGWANSVWHYF--------SESLTDLRISDLNGPEATLPDLRNRTFKNLILR 71 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~-~~~L~~L~~L~l~~N~l~~~~--------~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~ 71 (790)
++|+|++|+|+ .+|.. |.++++|+.|+|++|.++... ..+|+.|++++|.+...+......++|++|+|+
T Consensus 31 ~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~ 109 (306)
T 2z66_A 31 TRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQ 109 (306)
T ss_dssp CEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEEEEEEEETCTTCCEEECT
T ss_pred CEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccccChhhcCCCCCCCEEECC
Confidence 47999999999 66664 799999999999999998442 248999999999887654443334899999999
Q ss_pred cccccccCC-ccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccc-cCCccccC-CCCcEEeccCCcccc
Q 040908 72 SCNLTGELP-HFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTG-KVPQWMFG-RGPENIDLSYNNFAD 148 (790)
Q Consensus 72 ~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~-~~L~~l~ls~N~l~g 148 (790)
+|++++..+ ..+.++++|++|+|++|++++..|..|.++++|+.|+|++|.+++ .+|..+.. ++|+.|+|++|++++
T Consensus 110 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 189 (306)
T 2z66_A 110 HSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 189 (306)
T ss_dssp TSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCE
T ss_pred CCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCC
Confidence 999996554 589999999999999999999999999999999999999999997 57877777 899999999999999
Q ss_pred CCCCCCCCCCcceeeecCCCCC
Q 040908 149 ESSGSDCQNGAVNLFASSSKGS 170 (790)
Q Consensus 149 ~~p~~~~~~~~l~~~~~~~~~~ 170 (790)
..|..+..+++|+.++.+.+..
T Consensus 190 ~~~~~~~~l~~L~~L~L~~N~l 211 (306)
T 2z66_A 190 LSPTAFNSLSSLQVLNMSHNNF 211 (306)
T ss_dssp ECTTTTTTCTTCCEEECTTSCC
T ss_pred cCHHHhcCCCCCCEEECCCCcc
Confidence 9999999999999999987643
No 276
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.71 E-value=7.2e-18 Score=198.77 Aligned_cols=165 Identities=13% Similarity=0.133 Sum_probs=110.5
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCccc------cc---------------------------ccccc-------
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSV------WH---------------------------YFSES------- 41 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l------~~---------------------------~~~~~------- 41 (790)
.|+|++|+|+|.+|++|++|++|+.|+|++|.+ .+ .++..
T Consensus 85 ~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~ 164 (636)
T 4eco_A 85 GLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKD 164 (636)
T ss_dssp EEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHH
T ss_pred EEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHH
Confidence 699999999999999999999999999999965 11 00110
Q ss_pred ------------------ccceecc--ccCCCCCCCccccc-CcccEEEecccccccc-----------------CCccc
Q 040908 42 ------------------LTDLRIS--DLNGPEATLPDLRN-RTFKNLILRSCNLTGE-----------------LPHFL 83 (790)
Q Consensus 42 ------------------L~~L~l~--~n~~~~~~~~~~~~-~~L~~L~L~~N~l~~~-----------------~p~~~ 83 (790)
++.+.+. .|.+.. .+..+.. ++|++|+|++|+|+|. +|+.+
T Consensus 165 l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l 243 (636)
T 4eco_A 165 CINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDL 243 (636)
T ss_dssp HHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCC
T ss_pred HhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhh
Confidence 1111111 223333 2223333 6677777777777764 77777
Q ss_pred c--CCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCc-ccc-cCCccccC-------CCCcEEeccCCccccCCCC
Q 040908 84 G--EVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNL-LTG-KVPQWMFG-------RGPENIDLSYNNFADESSG 152 (790)
Q Consensus 84 ~--~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~-l~g-~~p~~~~~-------~~L~~l~ls~N~l~g~~p~ 152 (790)
+ +|++|++|+|++|++.|.+|..|+++++|+.|+|++|+ ++| .+|..+.. ++|+.|+|++|+|+ .+|.
T Consensus 244 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~ 322 (636)
T 4eco_A 244 KWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPV 322 (636)
T ss_dssp CGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCC
T ss_pred hhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCc
Confidence 6 77777777777777777777777777777777777776 776 66665543 56777777777776 6666
Q ss_pred --CCCCCCcceeeecCCC
Q 040908 153 --SDCQNGAVNLFASSSK 168 (790)
Q Consensus 153 --~~~~~~~l~~~~~~~~ 168 (790)
.+..++.|+.++.+.+
T Consensus 323 ~~~l~~l~~L~~L~L~~N 340 (636)
T 4eco_A 323 ETSLQKMKKLGMLECLYN 340 (636)
T ss_dssp HHHHTTCTTCCEEECCSC
T ss_pred hhhhccCCCCCEEeCcCC
Confidence 6677777777766544
No 277
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.71 E-value=6.2e-17 Score=164.44 Aligned_cols=147 Identities=13% Similarity=0.117 Sum_probs=108.7
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCccccccccc-cccceeccccCCCCCCCcccccCcccEEEeccccccccCC
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE-SLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELP 80 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p 80 (790)
.|++++|+|+ .+|..+.. .++.|+|++|++++..+. .+..+ ++|+.|+|++|+|++..|
T Consensus 15 ~l~~s~n~l~-~iP~~~~~--~~~~L~L~~N~l~~~~~~~~~~~l-----------------~~L~~L~L~~N~i~~i~~ 74 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIPQ--YTAELRLNNNEFTVLEATGIFKKL-----------------PQLRKINFSNNKITDIEE 74 (220)
T ss_dssp EEECCSSCCS-SCCSCCCT--TCSEEECCSSCCCEECCCCCGGGC-----------------TTCCEEECCSSCCCEECT
T ss_pred EeEeCCCCcc-cCccCCCC--CCCEEEcCCCcCCccCchhhhccC-----------------CCCCEEECCCCcCCEECH
Confidence 6888899988 68876643 457788888877765432 22222 577888888888886666
Q ss_pred ccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCCCCCCc
Q 040908 81 HFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQNGA 159 (790)
Q Consensus 81 ~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~~~ 159 (790)
..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|..+.. .+|+.|+|++|+|++..|..+..+.+
T Consensus 75 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 154 (220)
T 2v70_A 75 GAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHS 154 (220)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTT
T ss_pred HHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCC
Confidence 67888888888888888887666667788888888888888888777776666 77888888888888777777777777
Q ss_pred ceeeecCCC
Q 040908 160 VNLFASSSK 168 (790)
Q Consensus 160 l~~~~~~~~ 168 (790)
|..++.+.+
T Consensus 155 L~~L~L~~N 163 (220)
T 2v70_A 155 LSTLNLLAN 163 (220)
T ss_dssp CCEEECCSC
T ss_pred CCEEEecCc
Confidence 777776544
No 278
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.70 E-value=4.9e-17 Score=171.01 Aligned_cols=155 Identities=15% Similarity=0.098 Sum_probs=83.3
Q ss_pred EEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 3 RTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 3 L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
++.++.+++ .+|..+. ++|+.|++++|.+++..+ .+|+.|++++|.+...+...+.. ++|++|+|++|+|
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 344455555 5555443 345566666665554443 24555555555555444444443 5566666666666
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCccccc-CCccccC-CCCcEEeccCCccccCCCCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGK-VPQWMFG-RGPENIDLSYNNFADESSGS 153 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~-~~L~~l~ls~N~l~g~~p~~ 153 (790)
++..|..|.++++|++|+|++|++++..+..+.++++|+.|+|++|++++. +|..+.. ++|+.|+|++|++++..+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 168 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHH
Confidence 555555555666666666666666544444555666666666666665542 3555544 55666666666665554444
Q ss_pred CCCCCcc
Q 040908 154 DCQNGAV 160 (790)
Q Consensus 154 ~~~~~~l 160 (790)
+..+..+
T Consensus 169 ~~~l~~L 175 (276)
T 2z62_A 169 LRVLHQM 175 (276)
T ss_dssp GHHHHTC
T ss_pred hhhhhhc
Confidence 4443333
No 279
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.70 E-value=6.4e-17 Score=171.62 Aligned_cols=165 Identities=19% Similarity=0.232 Sum_probs=143.6
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCcccccCcccEEEecccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRNRTFKNLILRSCN 74 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~ 74 (790)
+.|++++|+|+ .+|..+. ++|+.|+|++|.+++..+. +|+.|++++|.+...+.. ...++|+.|+|++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~~L~Ls~N~ 88 (290)
T 1p9a_G 13 LEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQ 88 (290)
T ss_dssp CEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCCEEECCSSC
T ss_pred cEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCCEEECCCCc
Confidence 47899999999 8888775 6899999999999877653 789999999998865543 233899999999999
Q ss_pred ccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCC
Q 040908 75 LTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGS 153 (790)
Q Consensus 75 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~ 153 (790)
|+ .+|..+.++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..+..+.. ++|+.|+|++|+|++..+..
T Consensus 89 l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~ 167 (290)
T 1p9a_G 89 LQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGL 167 (290)
T ss_dssp CS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTT
T ss_pred CC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHH
Confidence 98 89999999999999999999999777788999999999999999999877776665 89999999999999877777
Q ss_pred CCCCCcceeeecCCCCC
Q 040908 154 DCQNGAVNLFASSSKGS 170 (790)
Q Consensus 154 ~~~~~~l~~~~~~~~~~ 170 (790)
+..+.+|+.++.+.+.-
T Consensus 168 ~~~l~~L~~L~L~~N~l 184 (290)
T 1p9a_G 168 LNGLENLDTLLLQENSL 184 (290)
T ss_dssp TTTCTTCCEEECCSSCC
T ss_pred hcCcCCCCEEECCCCcC
Confidence 88899999999876643
No 280
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.70 E-value=1.8e-17 Score=177.75 Aligned_cols=164 Identities=15% Similarity=0.058 Sum_probs=82.9
Q ss_pred EEEccCCcCcccCChhh--hcccccCcccccCcccccccc----------ccccceeccccCCCCCCCccccc-CcccEE
Q 040908 2 YRTVQSNRLSGELPEEL--GSLIHSGKWFGWANSVWHYFS----------ESLTDLRISDLNGPEATLPDLRN-RTFKNL 68 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~--~~L~~L~~L~l~~N~l~~~~~----------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L 68 (790)
+|+|++|+|++.+|..+ +.+++|+.|+|++|++++.+. .+|+.|++++|.+...+...+.. ++|++|
T Consensus 99 ~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 178 (312)
T 1wwl_A 99 ELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTL 178 (312)
T ss_dssp EEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEE
T ss_pred EEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEE
Confidence 45555555555555544 555555555555555554311 34555555555555554444443 555555
Q ss_pred Eecccccccc--CCccc--cCCCCCCEEEccCCcCCc--Ccc-hhccCCCCCcEEEeeCCcccccCCc-cccC-CCCcEE
Q 040908 69 ILRSCNLTGE--LPHFL--GEVSEMKVLDLSFNKLNG--TIP-ESFARLADVDFIYLTGNLLTGKVPQ-WMFG-RGPENI 139 (790)
Q Consensus 69 ~L~~N~l~~~--~p~~~--~~l~~L~~L~Ls~N~l~g--~ip-~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~-~~L~~l 139 (790)
+|++|++.+. +|..+ +++++|++|+|++|+|++ .++ ..+.++++|+.|+|++|++++.+|. .+.. ++|+.|
T Consensus 179 ~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 258 (312)
T 1wwl_A 179 DLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSL 258 (312)
T ss_dssp ECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEE
T ss_pred ECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEE
Confidence 5555555443 22233 555555555555555551 112 2234555555555555555554432 1222 455555
Q ss_pred eccCCccccCCCCCCCCCCcceeeecCCC
Q 040908 140 DLSYNNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 140 ~ls~N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
+|++|+|+ .+|..+. .+|+.++.+.+
T Consensus 259 ~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N 284 (312)
T 1wwl_A 259 NLSFTGLK-QVPKGLP--AKLSVLDLSYN 284 (312)
T ss_dssp ECTTSCCS-SCCSSCC--SEEEEEECCSS
T ss_pred ECCCCccC-hhhhhcc--CCceEEECCCC
Confidence 55555555 4454444 45555555443
No 281
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.70 E-value=6.1e-17 Score=182.29 Aligned_cols=166 Identities=13% Similarity=0.099 Sum_probs=126.6
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|+|++|+|++..|..|.++++|+.|+|++|+++..++ .+|+.|++++|.+...+...+.. ++|+.|+|++|
T Consensus 91 ~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~ 170 (440)
T 3zyj_A 91 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 170 (440)
T ss_dssp CEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC
T ss_pred CEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCC
Confidence 478999999997667789999999999999999987665 37888889998888766655555 77888888874
Q ss_pred cccccCCc-cccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCC
Q 040908 74 NLTGELPH-FLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESS 151 (790)
Q Consensus 74 ~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p 151 (790)
+..+.+|. .|.++++|++|+|++|+|+ .+| .+..+++|+.|+|++|++++..|..+.. ++|+.|+|++|+|++..|
T Consensus 171 ~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 248 (440)
T 3zyj_A 171 KRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIER 248 (440)
T ss_dssp TTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECT
T ss_pred CCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEECh
Confidence 43334443 6777888888888888777 566 4777777888888888777777776666 777777787777777777
Q ss_pred CCCCCCCcceeeecCCC
Q 040908 152 GSDCQNGAVNLFASSSK 168 (790)
Q Consensus 152 ~~~~~~~~l~~~~~~~~ 168 (790)
..+..+.+|+.++.+.+
T Consensus 249 ~~~~~l~~L~~L~L~~N 265 (440)
T 3zyj_A 249 NAFDNLQSLVEINLAHN 265 (440)
T ss_dssp TSSTTCTTCCEEECTTS
T ss_pred hhhcCCCCCCEEECCCC
Confidence 77777777777777665
No 282
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.70 E-value=4.5e-17 Score=185.18 Aligned_cols=168 Identities=15% Similarity=0.043 Sum_probs=152.2
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|+|++|+|++..|..|.++++|+.|+|++|.+++..|. +|+.|++++|.+...+...+.. ++|++|+|++|
T Consensus 35 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 114 (477)
T 2id5_A 35 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISEN 114 (477)
T ss_dssp SEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTS
T ss_pred cEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCC
Confidence 4799999999987788999999999999999999987653 7899999999999888777666 89999999999
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCC
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSG 152 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~ 152 (790)
++++..|..|.++++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..+.. ++|+.|+|++|++++..+.
T Consensus 115 ~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~ 194 (477)
T 2id5_A 115 KIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDY 194 (477)
T ss_dssp CCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTT
T ss_pred ccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChh
Confidence 999888999999999999999999999888899999999999999999999776666766 8999999999999998888
Q ss_pred CCCCCCcceeeecCCC
Q 040908 153 SDCQNGAVNLFASSSK 168 (790)
Q Consensus 153 ~~~~~~~l~~~~~~~~ 168 (790)
.+..+.+|+.++.+.+
T Consensus 195 ~~~~l~~L~~L~l~~~ 210 (477)
T 2id5_A 195 SFKRLYRLKVLEISHW 210 (477)
T ss_dssp CSCSCTTCCEEEEECC
T ss_pred hcccCcccceeeCCCC
Confidence 9999999999988764
No 283
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.70 E-value=7.3e-17 Score=182.26 Aligned_cols=166 Identities=10% Similarity=0.054 Sum_probs=123.2
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|+|++|+|++..|..|.++++|++|+|++|+++..++. +|+.|++++|.+...+...+.. ++|+.|+|++|
T Consensus 102 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~ 181 (452)
T 3zyi_A 102 EVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL 181 (452)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC
T ss_pred CEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCC
Confidence 4789999999977778899999999999999999876653 7888899999888766655555 77777777774
Q ss_pred cccccCCc-cccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCC
Q 040908 74 NLTGELPH-FLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESS 151 (790)
Q Consensus 74 ~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p 151 (790)
+..+.+|. .|.++++|++|+|++|+|+ .+| .+..+++|+.|+|++|++++..|..+.. ++|+.|+|++|+|++..|
T Consensus 182 ~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 259 (452)
T 3zyi_A 182 KKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIER 259 (452)
T ss_dssp TTCCEECTTTTTTCTTCCEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECT
T ss_pred CCccccChhhccCCCCCCEEECCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECH
Confidence 33334443 5677777777777777776 344 4677777777777777777766766665 677777777777777777
Q ss_pred CCCCCCCcceeeecCCC
Q 040908 152 GSDCQNGAVNLFASSSK 168 (790)
Q Consensus 152 ~~~~~~~~l~~~~~~~~ 168 (790)
..+..+.+|+.++.+.+
T Consensus 260 ~~~~~l~~L~~L~L~~N 276 (452)
T 3zyi_A 260 NAFDGLASLVELNLAHN 276 (452)
T ss_dssp TTTTTCTTCCEEECCSS
T ss_pred HHhcCCCCCCEEECCCC
Confidence 77777777777777655
No 284
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.69 E-value=4.8e-17 Score=165.24 Aligned_cols=132 Identities=17% Similarity=0.125 Sum_probs=119.0
Q ss_pred CEEEccCCcCcccCCh-hhhcccccCcccccCccccccccccccceeccccCCCCCCCcccccCcccEEEeccccccccC
Q 040908 1 MYRTVQSNRLSGELPE-ELGSLIHSGKWFGWANSVWHYFSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGEL 79 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~-~~~~L~~L~~L~l~~N~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~ 79 (790)
++|+|++|+|++..|. .|..+++|+.|+|++|++++..+..+..+ ++|++|+|++|+|++..
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l-----------------~~L~~L~Ls~N~l~~~~ 97 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA-----------------SGVNEILLTSNRLENVQ 97 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTC-----------------TTCCEEECCSSCCCCCC
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCC-----------------CCCCEEECCCCccCccC
Confidence 4799999999976554 58999999999999999998777666655 58999999999999887
Q ss_pred CccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccC
Q 040908 80 PHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADE 149 (790)
Q Consensus 80 p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~ 149 (790)
|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+.. ++|+.|+|++|++++.
T Consensus 98 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 98 HKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp GGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred HhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 888999999999999999999888999999999999999999999988988877 8999999999999853
No 285
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.69 E-value=2.4e-17 Score=194.27 Aligned_cols=167 Identities=20% Similarity=0.198 Sum_probs=149.1
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcc-ccc-ccc------------ccccceeccccCCCCCCC-ccccc-Cc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANS-VWH-YFS------------ESLTDLRISDLNGPEATL-PDLRN-RT 64 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~-l~~-~~~------------~~L~~L~l~~n~~~~~~~-~~~~~-~~ 64 (790)
++|+|++|++.|.+|..|+++++|+.|++++|+ +++ .+| .+|+.|++++|.+...+. ..+.. ++
T Consensus 252 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~ 331 (636)
T 4eco_A 252 TDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKK 331 (636)
T ss_dssp CEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTT
T ss_pred CEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCC
Confidence 589999999999999999999999999999998 887 555 689999999999994443 14544 89
Q ss_pred ccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCC-CcEEEeeCCcccccCCccccC-C--CCcEEe
Q 040908 65 FKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLAD-VDFIYLTGNLLTGKVPQWMFG-R--GPENID 140 (790)
Q Consensus 65 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~-L~~L~ls~N~l~g~~p~~~~~-~--~L~~l~ 140 (790)
|+.|+|++|+++|.+| .|+++++|++|+|++|+++ .+|..|.++++ |+.|+|++|+++ .+|..+.. . +|+.|+
T Consensus 332 L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~ 408 (636)
T 4eco_A 332 LGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAID 408 (636)
T ss_dssp CCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEE
T ss_pred CCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEE
Confidence 9999999999999999 9999999999999999999 99999999999 999999999999 78887765 3 799999
Q ss_pred ccCCccccCCCCCCC-------CCCcceeeecCCCCC
Q 040908 141 LSYNNFADESSGSDC-------QNGAVNLFASSSKGS 170 (790)
Q Consensus 141 ls~N~l~g~~p~~~~-------~~~~l~~~~~~~~~~ 170 (790)
|++|++++.+|..++ .+.+|+.++.+.+..
T Consensus 409 Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l 445 (636)
T 4eco_A 409 FSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQI 445 (636)
T ss_dssp CCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCC
T ss_pred CcCCcCCCcchhhhcccccccccCCCCCEEECcCCcc
Confidence 999999999999998 778899999877644
No 286
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.69 E-value=9.1e-17 Score=181.36 Aligned_cols=170 Identities=17% Similarity=0.075 Sum_probs=135.6
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc--------ccccceeccccCCCCCCCcc-ccc-CcccEEEe
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS--------ESLTDLRISDLNGPEATLPD-LRN-RTFKNLIL 70 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~--------~~L~~L~l~~n~~~~~~~~~-~~~-~~L~~L~L 70 (790)
++|+|++|+|++..|..|+++++|++|+|++|.+++..+ .+|+.|++++|.+....+.. +.. ++|++|+|
T Consensus 82 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L 161 (455)
T 3v47_A 82 IILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDL 161 (455)
T ss_dssp CEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEEC
T ss_pred CEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeC
Confidence 478888888887778888888888888888888875322 36778888888877665443 433 77788888
Q ss_pred ccccccccCCccccCC----------------------------------------------------------------
Q 040908 71 RSCNLTGELPHFLGEV---------------------------------------------------------------- 86 (790)
Q Consensus 71 ~~N~l~~~~p~~~~~l---------------------------------------------------------------- 86 (790)
++|++++..|..+.++
T Consensus 162 ~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L 241 (455)
T 3v47_A 162 TFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKI 241 (455)
T ss_dssp TTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCE
T ss_pred CCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccce
Confidence 8877776666554432
Q ss_pred ---------------------------------CCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC
Q 040908 87 ---------------------------------SEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG 133 (790)
Q Consensus 87 ---------------------------------~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~ 133 (790)
++|++|+|++|++++.+|..|.++++|+.|+|++|++++..|..+..
T Consensus 242 ~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 321 (455)
T 3v47_A 242 QSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWG 321 (455)
T ss_dssp EEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred eeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcC
Confidence 35777777777777778999999999999999999999988888877
Q ss_pred -CCCcEEeccCCccccCCCCCCCCCCcceeeecCCCCC
Q 040908 134 -RGPENIDLSYNNFADESSGSDCQNGAVNLFASSSKGS 170 (790)
Q Consensus 134 -~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~~~ 170 (790)
++|+.|+|++|++++..|..+..+..|+.++.+.+..
T Consensus 322 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 359 (455)
T 3v47_A 322 LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHI 359 (455)
T ss_dssp CTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCC
T ss_pred cccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcc
Confidence 8999999999999998899999999999999987643
No 287
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.69 E-value=5.4e-17 Score=166.91 Aligned_cols=166 Identities=16% Similarity=0.139 Sum_probs=140.8
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcc-cccccc------ccccceeccc-cCCCCCCCccccc-CcccEEEec
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANS-VWHYFS------ESLTDLRISD-LNGPEATLPDLRN-RTFKNLILR 71 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~-l~~~~~------~~L~~L~l~~-n~~~~~~~~~~~~-~~L~~L~L~ 71 (790)
++|+|++|+|++..+..|.++++|+.|++++|+ ++...+ .+|+.|++++ |.+...+...+.. ++|++|+|+
T Consensus 34 ~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~ 113 (239)
T 2xwt_C 34 QTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIF 113 (239)
T ss_dssp CEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEE
T ss_pred cEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCC
Confidence 479999999996666689999999999999997 876654 3789999998 8888877777766 899999999
Q ss_pred cccccccCCccccCCCCCC---EEEccCC-cCCcCcchhccCCCCCc-EEEeeCCcccccCCcc-ccCCCCcEEeccCCc
Q 040908 72 SCNLTGELPHFLGEVSEMK---VLDLSFN-KLNGTIPESFARLADVD-FIYLTGNLLTGKVPQW-MFGRGPENIDLSYNN 145 (790)
Q Consensus 72 ~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~g~ip~~~~~l~~L~-~L~ls~N~l~g~~p~~-~~~~~L~~l~ls~N~ 145 (790)
+|+|++ +|. |+++++|+ +|+|++| ++++..+..|.++++|+ .|+|++|+++ .+|.. +...+|+.|+|++|+
T Consensus 114 ~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 114 NTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp EECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred CCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 999995 887 88999998 9999999 99866666799999999 9999999999 55544 444789999999995
Q ss_pred -cccCCCCCCCCC-CcceeeecCCCC
Q 040908 146 -FADESSGSDCQN-GAVNLFASSSKG 169 (790)
Q Consensus 146 -l~g~~p~~~~~~-~~l~~~~~~~~~ 169 (790)
+++..+..+..+ .+|+.++.+.+.
T Consensus 191 ~l~~i~~~~~~~l~~~L~~L~l~~N~ 216 (239)
T 2xwt_C 191 YLTVIDKDAFGGVYSGPSLLDVSQTS 216 (239)
T ss_dssp TCCEECTTTTTTCSBCCSEEECTTCC
T ss_pred CcccCCHHHhhccccCCcEEECCCCc
Confidence 998778888888 899999887653
No 288
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.68 E-value=1.1e-16 Score=180.83 Aligned_cols=168 Identities=18% Similarity=0.133 Sum_probs=147.4
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|+|++|+|++..|..|.++++|+.|+|++|.+++..+. +|+.|+|++|.+...+...+.. ++|++|+|++|
T Consensus 78 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 157 (452)
T 3zyi_A 78 RYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 157 (452)
T ss_dssp SEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSC
T ss_pred cEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCC
Confidence 4799999999988889999999999999999999987653 8999999999999888777776 89999999999
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCcCcch-hccCCCCCcEEEeeCCcccccCCccccCCCCcEEeccCCccccCCCC
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNGTIPE-SFARLADVDFIYLTGNLLTGKVPQWMFGRGPENIDLSYNNFADESSG 152 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~-~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ls~N~l~g~~p~ 152 (790)
+|+...+..|.++++|++|+|++|+..+.+|. .|.++++|+.|+|++|++++ +|......+|+.|+|++|+|++..|.
T Consensus 158 ~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~ 236 (452)
T 3zyi_A 158 PIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIRPG 236 (452)
T ss_dssp CCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEECGG
T ss_pred CcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cccccccccccEEECcCCcCcccCcc
Confidence 99976677899999999999999554446655 69999999999999999996 46544448999999999999999999
Q ss_pred CCCCCCcceeeecCCCC
Q 040908 153 SDCQNGAVNLFASSSKG 169 (790)
Q Consensus 153 ~~~~~~~l~~~~~~~~~ 169 (790)
.+..+.+|+.+..+.+.
T Consensus 237 ~~~~l~~L~~L~L~~n~ 253 (452)
T 3zyi_A 237 SFHGLSSLKKLWVMNSQ 253 (452)
T ss_dssp GGTTCTTCCEEECTTSC
T ss_pred cccCccCCCEEEeCCCc
Confidence 99999999999987664
No 289
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=3e-17 Score=197.85 Aligned_cols=166 Identities=11% Similarity=0.068 Sum_probs=115.0
Q ss_pred EEEccCCcCcccCChhhhcccccCcccc-cCcccccccccc---------------------------------------
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFG-WANSVWHYFSES--------------------------------------- 41 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l-~~N~l~~~~~~~--------------------------------------- 41 (790)
.|+|++|+|+|.+|++|++|++|+.|+| ++|.+++..+-.
T Consensus 327 ~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~ 406 (876)
T 4ecn_A 327 GLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQD 406 (876)
T ss_dssp EEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHH
T ss_pred EEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHH
Confidence 6999999999999999999999999999 888776552211
Q ss_pred ------------------ccceeccc--cCCCCCCCccccc-CcccEEEeccccccc-----------------cCCccc
Q 040908 42 ------------------LTDLRISD--LNGPEATLPDLRN-RTFKNLILRSCNLTG-----------------ELPHFL 83 (790)
Q Consensus 42 ------------------L~~L~l~~--n~~~~~~~~~~~~-~~L~~L~L~~N~l~~-----------------~~p~~~ 83 (790)
+..+.+.. |.+...+ ..+.. ++|+.|+|++|+|+| .+|+.+
T Consensus 407 ~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP-~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l 485 (876)
T 4ecn_A 407 AINRNPEMKPIKKDSRISLKDTQIGNLTNRITFIS-KAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEEL 485 (876)
T ss_dssp HHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEEC-GGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCC
T ss_pred HhhhCccccccccccccchhhceeccccCcccchh-HHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhh
Confidence 11111111 2222222 23333 677777777777776 377776
Q ss_pred c--CCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCc-ccc-cCCccccC-C-------CCcEEeccCCccccCCC
Q 040908 84 G--EVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNL-LTG-KVPQWMFG-R-------GPENIDLSYNNFADESS 151 (790)
Q Consensus 84 ~--~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~-l~g-~~p~~~~~-~-------~L~~l~ls~N~l~g~~p 151 (790)
+ +|++|++|+|++|++.|.+|..|++|++|+.|+|++|+ ++| .+|..+.. . +|+.|+|++|+|+ .+|
T Consensus 486 ~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip 564 (876)
T 4ecn_A 486 SWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFP 564 (876)
T ss_dssp CGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCC
T ss_pred hhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccC
Confidence 6 77777777777777777777777777777777777776 776 66654433 2 6777777777777 667
Q ss_pred C--CCCCCCcceeeecCCCC
Q 040908 152 G--SDCQNGAVNLFASSSKG 169 (790)
Q Consensus 152 ~--~~~~~~~l~~~~~~~~~ 169 (790)
. .+..+++|+.++.+.+.
T Consensus 565 ~~~~l~~L~~L~~L~Ls~N~ 584 (876)
T 4ecn_A 565 ASASLQKMVKLGLLDCVHNK 584 (876)
T ss_dssp CHHHHTTCTTCCEEECTTSC
T ss_pred ChhhhhcCCCCCEEECCCCC
Confidence 6 67777777777776553
No 290
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.68 E-value=1.3e-16 Score=172.45 Aligned_cols=167 Identities=15% Similarity=0.103 Sum_probs=114.2
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCcccccCcccEEEecccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRNRTFKNLILRSCN 74 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~ 74 (790)
++|+|++|+|++..|..|.++++|++|+|++|.+++..|. +|+.|++++|.+...+...+ ++|++|+|++|+
T Consensus 57 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~--~~L~~L~l~~n~ 134 (332)
T 2ft3_A 57 TLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDNR 134 (332)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSSCC--TTCCEEECCSSC
T ss_pred eEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCcccc--ccCCEEECCCCc
Confidence 3577777777755566777777777777777777766442 56677777776665443333 567777777777
Q ss_pred ccccCCccccCCCCCCEEEccCCcCC--cCcchhccCC--------------------CCCcEEEeeCCcccccCCcccc
Q 040908 75 LTGELPHFLGEVSEMKVLDLSFNKLN--GTIPESFARL--------------------ADVDFIYLTGNLLTGKVPQWMF 132 (790)
Q Consensus 75 l~~~~p~~~~~l~~L~~L~Ls~N~l~--g~ip~~~~~l--------------------~~L~~L~ls~N~l~g~~p~~~~ 132 (790)
|++..+..|.++++|++|+|++|+++ +..|..+..+ ++|+.|+|++|++++..|..+.
T Consensus 135 i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~ 214 (332)
T 2ft3_A 135 IRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLL 214 (332)
T ss_dssp CCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSST
T ss_pred cCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhc
Confidence 76444455666777777777777664 2444444433 4677777777778777766666
Q ss_pred C-CCCcEEeccCCccccCCCCCCCCCCcceeeecCCCC
Q 040908 133 G-RGPENIDLSYNNFADESSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 133 ~-~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~~ 169 (790)
. ++|+.|+|++|++++..|..+..+++|+.++.+.+.
T Consensus 215 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 252 (332)
T 2ft3_A 215 RYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNK 252 (332)
T ss_dssp TCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSC
T ss_pred CCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCc
Confidence 6 788888888888888777778888888888877653
No 291
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.68 E-value=2.4e-17 Score=187.98 Aligned_cols=166 Identities=17% Similarity=0.097 Sum_probs=96.3
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCc-----------------c
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLP-----------------D 59 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~-----------------~ 59 (790)
++|+|++|+|++..|..|+.+++|+.|+|++|.+++.+| .+|+.|++++|.+...+.. .
T Consensus 37 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~ 116 (487)
T 3oja_A 37 KELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSC 116 (487)
T ss_dssp CEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEECTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEE
T ss_pred cEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcccccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCc
Confidence 468888888887667788888888888888888875543 3566666666655432211 0
Q ss_pred cccCcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhcc-CCCCCcEEEeeCCcccccCCccccCCCCcE
Q 040908 60 LRNRTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFA-RLADVDFIYLTGNLLTGKVPQWMFGRGPEN 138 (790)
Q Consensus 60 ~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~ 138 (790)
...++|+.|+|++|.|++..|..|+++++|++|+|++|+|++.+|..+. ++++|+.|+|++|.|++.. .....++|+.
T Consensus 117 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~-~~~~l~~L~~ 195 (487)
T 3oja_A 117 SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK-GQVVFAKLKT 195 (487)
T ss_dssp CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE-CCCCCTTCCE
T ss_pred cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccc-ccccCCCCCE
Confidence 0113455555555555555555555556666666666666555555554 4555666666666655442 2222355556
Q ss_pred EeccCCccccCCCCCCCCCCcceeeecCCC
Q 040908 139 IDLSYNNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 139 l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
|+|++|+|++..| .+..++.|..++.+.+
T Consensus 196 L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N 224 (487)
T 3oja_A 196 LDLSSNKLAFMGP-EFQSAAGVTWISLRNN 224 (487)
T ss_dssp EECCSSCCCEECG-GGGGGTTCSEEECTTS
T ss_pred EECCCCCCCCCCH-hHcCCCCccEEEecCC
Confidence 6666666655333 3555555555555443
No 292
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.68 E-value=2e-16 Score=178.11 Aligned_cols=169 Identities=17% Similarity=0.088 Sum_probs=147.6
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|+|++|+|++..|..|.++++|+.|+|++|.++...+ .+|+.|++++|.+...+...+.. ++|++|+|++|
T Consensus 67 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 146 (440)
T 3zyj_A 67 RLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNN 146 (440)
T ss_dssp SEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSC
T ss_pred cEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCC
Confidence 479999999998778899999999999999999987765 37999999999999888777766 89999999999
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCcCcch-hccCCCCCcEEEeeCCcccccCCccccCCCCcEEeccCCccccCCCC
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNGTIPE-SFARLADVDFIYLTGNLLTGKVPQWMFGRGPENIDLSYNNFADESSG 152 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~-~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ls~N~l~g~~p~ 152 (790)
+|+...+..|.++++|++|+|++|+..+.+|. .|.++++|+.|+|++|+++ .+|......+|+.|+|++|+|++..|.
T Consensus 147 ~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 225 (440)
T 3zyj_A 147 PIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPG 225 (440)
T ss_dssp CCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTT
T ss_pred cccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCCccCccChh
Confidence 99977777899999999999999554446654 7999999999999999999 567544448999999999999999999
Q ss_pred CCCCCCcceeeecCCCCC
Q 040908 153 SDCQNGAVNLFASSSKGS 170 (790)
Q Consensus 153 ~~~~~~~l~~~~~~~~~~ 170 (790)
.+..+..|+.+..+.+..
T Consensus 226 ~~~~l~~L~~L~L~~n~l 243 (440)
T 3zyj_A 226 SFQGLMHLQKLWMIQSQI 243 (440)
T ss_dssp TTTTCTTCCEEECTTCCC
T ss_pred hhccCccCCEEECCCCce
Confidence 999999999999876643
No 293
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.67 E-value=2.2e-16 Score=161.43 Aligned_cols=145 Identities=18% Similarity=0.197 Sum_probs=83.2
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCccccccccccccceeccccCCCCCCCcccccCcccEEEeccccccccCCc
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELPH 81 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~ 81 (790)
.+++++|+++ .+|..+. ++|+.|+|++|.+++..|..+..+ ++|+.|+|++|+|++..+.
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l-----------------~~L~~L~L~~N~l~~i~~~ 82 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSL-----------------INLKELYLGSNQLGALPVG 82 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTC-----------------TTCCEEECCSSCCCCCCTT
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCc-----------------cCCcEEECCCCCCCCcChh
Confidence 4788888887 7887554 778888888888877665433322 3455555555555533333
Q ss_pred cccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCCCCCCcc
Q 040908 82 FLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQNGAV 160 (790)
Q Consensus 82 ~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~~~l 160 (790)
.|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+.. ++|+.|+|++|+|++..+..+..++.|
T Consensus 83 ~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 161 (229)
T 3e6j_A 83 VFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSL 161 (229)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTC
T ss_pred hcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCC
Confidence 4455555555555555555444444555555555555555555 34444433 555555555555555444445555555
Q ss_pred eeeecCC
Q 040908 161 NLFASSS 167 (790)
Q Consensus 161 ~~~~~~~ 167 (790)
+.+..+.
T Consensus 162 ~~L~l~~ 168 (229)
T 3e6j_A 162 THAYLFG 168 (229)
T ss_dssp CEEECTT
T ss_pred CEEEeeC
Confidence 5555443
No 294
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=1.1e-16 Score=158.82 Aligned_cols=129 Identities=20% Similarity=0.238 Sum_probs=109.7
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc-cccceeccccCCCCCCCcccccCcccEEEeccccccccC
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE-SLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGEL 79 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~ 79 (790)
++|++++|+|+ .+|..+.. +|+.|++++|.+++..+. .+..+ ++|+.|+|++|+|++..
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l-----------------~~L~~L~Ls~N~l~~~~ 70 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRL-----------------PHLVKLELKRNQLTGIE 70 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGC-----------------TTCCEEECCSSCCCCBC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccC-----------------CCCCEEECCCCCCCCcC
Confidence 46889999997 88876653 777778887777665543 23333 68999999999999888
Q ss_pred CccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccC
Q 040908 80 PHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADE 149 (790)
Q Consensus 80 p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~ 149 (790)
|..|+++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++.+|..+.. ++|+.|+|++|++++.
T Consensus 71 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 71 PNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp TTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred HhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 999999999999999999999888888999999999999999999998988877 8999999999999864
No 295
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.67 E-value=6e-17 Score=173.70 Aligned_cols=164 Identities=18% Similarity=0.130 Sum_probs=136.6
Q ss_pred CEEEccCCcCcccCChhhhcc-----cccCcccccCccccccccc------cccceeccccCCCCC--CCccc--c-cCc
Q 040908 1 MYRTVQSNRLSGELPEELGSL-----IHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEA--TLPDL--R-NRT 64 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L-----~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~--~~~~~--~-~~~ 64 (790)
++|+|++|+|++. |..++.+ ++|++|+|++|++.+..+. +|+.|++++|.+... .+..+ . .++
T Consensus 124 ~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~ 202 (312)
T 1wwl_A 124 NILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPT 202 (312)
T ss_dssp SEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTT
T ss_pred cEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCC
Confidence 5799999999966 9999988 9999999999999987753 789999999986532 11122 2 289
Q ss_pred ccEEEeccccccc--cCC-ccccCCCCCCEEEccCCcCCcCcc-hhccCCCCCcEEEeeCCcccccCCccccCCCCcEEe
Q 040908 65 FKNLILRSCNLTG--ELP-HFLGEVSEMKVLDLSFNKLNGTIP-ESFARLADVDFIYLTGNLLTGKVPQWMFGRGPENID 140 (790)
Q Consensus 65 L~~L~L~~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~g~ip-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ 140 (790)
|++|+|++|+|++ .++ ..+.++++|++|+|++|+|++.+| ..+..+++|+.|+|++|+|+ .+|..+. ++|+.||
T Consensus 203 L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-~~L~~L~ 280 (312)
T 1wwl_A 203 LQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-AKLSVLD 280 (312)
T ss_dssp CCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-SEEEEEE
T ss_pred CCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-CCceEEE
Confidence 9999999999983 333 345689999999999999998776 56778999999999999999 7787776 8899999
Q ss_pred ccCCccccCCCCCCCCCCcceeeecCCCC
Q 040908 141 LSYNNFADESSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 141 ls~N~l~g~~p~~~~~~~~l~~~~~~~~~ 169 (790)
|++|+|++. |. +..+++|+.++.+.+.
T Consensus 281 Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~ 307 (312)
T 1wwl_A 281 LSYNRLDRN-PS-PDELPQVGNLSLKGNP 307 (312)
T ss_dssp CCSSCCCSC-CC-TTTSCEEEEEECTTCT
T ss_pred CCCCCCCCC-hh-HhhCCCCCEEeccCCC
Confidence 999999987 65 8889999999887653
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.67 E-value=2.1e-16 Score=170.65 Aligned_cols=165 Identities=16% Similarity=0.156 Sum_probs=135.4
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCcccccCcccEEEecccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRNRTFKNLILRSCN 74 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~ 74 (790)
++|+|++|+|++..+..|+++++|++|+|++|.+++..|. +|+.|++++|.+...+...+ ++|++|+|++|+
T Consensus 55 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~--~~L~~L~l~~n~ 132 (330)
T 1xku_A 55 ALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMP--KTLQELRVHENE 132 (330)
T ss_dssp CEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSCC--TTCCEEECCSSC
T ss_pred eEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCccChhhc--ccccEEECCCCc
Confidence 4789999999966666899999999999999999887553 78889999998886554433 689999999999
Q ss_pred ccccCCccccCCCCCCEEEccCCcCC--cCcchhccCCCCCcEEEeeCCcccccCCccccCCCCcEEeccCCccccCCCC
Q 040908 75 LTGELPHFLGEVSEMKVLDLSFNKLN--GTIPESFARLADVDFIYLTGNLLTGKVPQWMFGRGPENIDLSYNNFADESSG 152 (790)
Q Consensus 75 l~~~~p~~~~~l~~L~~L~Ls~N~l~--g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ls~N~l~g~~p~ 152 (790)
+++..+..|.++++|++|+|++|++. +..|..|.++++|+.|++++|+++. +|..+. ++|+.|+|++|++++..|.
T Consensus 133 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~-~~L~~L~l~~n~l~~~~~~ 210 (330)
T 1xku_A 133 ITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP-PSLTELHLDGNKITKVDAA 210 (330)
T ss_dssp CCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC-TTCSEEECTTSCCCEECTG
T ss_pred ccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc-ccCCEEECCCCcCCccCHH
Confidence 99777777899999999999999985 3677888999999999999998885 554443 6788888888888888888
Q ss_pred CCCCCCcceeeecCCCC
Q 040908 153 SDCQNGAVNLFASSSKG 169 (790)
Q Consensus 153 ~~~~~~~l~~~~~~~~~ 169 (790)
.+..+.+|+.++.+.+.
T Consensus 211 ~~~~l~~L~~L~Ls~n~ 227 (330)
T 1xku_A 211 SLKGLNNLAKLGLSFNS 227 (330)
T ss_dssp GGTTCTTCCEEECCSSC
T ss_pred HhcCCCCCCEEECCCCc
Confidence 88888888888887653
No 297
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.67 E-value=1.7e-16 Score=161.12 Aligned_cols=131 Identities=17% Similarity=0.184 Sum_probs=117.4
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccccccceeccccCCCCCCCcccccCcccEEEeccccccccCC
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELP 80 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p 80 (790)
+.|+|++|+|++..|..|..+++|+.|+|++|++++..|..+..| ++|++|+|++|+|+...+
T Consensus 35 ~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l-----------------~~L~~L~Ls~N~l~~l~~ 97 (220)
T 2v9t_B 35 TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGL-----------------RSLNSLVLYGNKITELPK 97 (220)
T ss_dssp CEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTC-----------------SSCCEEECCSSCCCCCCT
T ss_pred CEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCC-----------------cCCCEEECCCCcCCccCH
Confidence 479999999997666689999999999999999998877777766 589999999999995555
Q ss_pred ccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCcccc
Q 040908 81 HFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFAD 148 (790)
Q Consensus 81 ~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g 148 (790)
..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+.. ++|+.|+|++|++..
T Consensus 98 ~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 98 SLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred hHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 56899999999999999999888999999999999999999999888877776 899999999999973
No 298
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.66 E-value=1.2e-16 Score=187.32 Aligned_cols=169 Identities=15% Similarity=0.031 Sum_probs=131.9
Q ss_pred CEEEccCCcCccc--CChhhhcccccCcccccCcccccccc-----ccccceeccccCCCCCCC-ccccc-CcccEEEec
Q 040908 1 MYRTVQSNRLSGE--LPEELGSLIHSGKWFGWANSVWHYFS-----ESLTDLRISDLNGPEATL-PDLRN-RTFKNLILR 71 (790)
Q Consensus 1 ~~L~Ls~N~l~g~--iP~~~~~L~~L~~L~l~~N~l~~~~~-----~~L~~L~l~~n~~~~~~~-~~~~~-~~L~~L~L~ 71 (790)
++|+|++|++++. +|..+..+++|+.|++++|.+++.+. .+|+.|++++|.+..... ..+.. ++|+.|+|+
T Consensus 353 ~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~ 432 (606)
T 3vq2_A 353 SYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDIS 432 (606)
T ss_dssp CEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECT
T ss_pred CEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECc
Confidence 4678888888755 37788888888888888888776442 377788888887776554 44444 788888888
Q ss_pred cccccccCCccccCCCCCCEEEccCCcCCc-CcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccC
Q 040908 72 SCNLTGELPHFLGEVSEMKVLDLSFNKLNG-TIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADE 149 (790)
Q Consensus 72 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~ 149 (790)
+|++++.+|..|+++++|++|+|++|++++ .+|..|.++++|+.|+|++|++++.+|..+.. ++|+.|+|++|++++.
T Consensus 433 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 512 (606)
T 3vq2_A 433 YTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFL 512 (606)
T ss_dssp TSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCE
T ss_pred CCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCc
Confidence 888888888888888888888888888886 36778888888888888888888877777766 7888888888888888
Q ss_pred CCCCCCCCCcceeeecCCCC
Q 040908 150 SSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 150 ~p~~~~~~~~l~~~~~~~~~ 169 (790)
+|..++.+++|+.++.+.+.
T Consensus 513 ~~~~~~~l~~L~~L~l~~N~ 532 (606)
T 3vq2_A 513 DSSHYNQLYSLSTLDCSFNR 532 (606)
T ss_dssp EGGGTTTCTTCCEEECTTSC
T ss_pred CHHHccCCCcCCEEECCCCc
Confidence 88888888888888877653
No 299
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.66 E-value=6.6e-16 Score=166.78 Aligned_cols=161 Identities=14% Similarity=0.131 Sum_probs=87.4
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCC--CCCccccc-CcccEEEec
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPE--ATLPDLRN-RTFKNLILR 71 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~--~~~~~~~~-~~L~~L~L~ 71 (790)
++|+|++|+|+ .+|..+. ++|+.|++++|.+++..+ .+|+.|++++|.+.. .....+.. ++|+.|+|+
T Consensus 103 ~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~ 179 (330)
T 1xku_A 103 ERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA 179 (330)
T ss_dssp CEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECC
T ss_pred CEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECC
Confidence 35666666666 5555443 456666666666654443 245555555555542 22223333 555666666
Q ss_pred cccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCC
Q 040908 72 SCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADES 150 (790)
Q Consensus 72 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~ 150 (790)
+|+++ .+|..+. ++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..+.. ++|+.|+|++|+|+ .+
T Consensus 180 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l 255 (330)
T 1xku_A 180 DTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KV 255 (330)
T ss_dssp SSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SC
T ss_pred CCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cC
Confidence 66655 4444433 55566666666655555555555666666666666655555544444 55566666666555 45
Q ss_pred CCCCCCCCcceeeecCCC
Q 040908 151 SGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 151 p~~~~~~~~l~~~~~~~~ 168 (790)
|..+..++.|+.++.+.+
T Consensus 256 p~~l~~l~~L~~L~l~~N 273 (330)
T 1xku_A 256 PGGLADHKYIQVVYLHNN 273 (330)
T ss_dssp CTTTTTCSSCCEEECCSS
T ss_pred ChhhccCCCcCEEECCCC
Confidence 555555555555555443
No 300
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.66 E-value=4e-16 Score=168.72 Aligned_cols=161 Identities=16% Similarity=0.147 Sum_probs=101.1
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEecccc
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCN 74 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~ 74 (790)
.|++++|.++ .+|..+. ++|+.|++++|.+.+..+. +|+.|++++|.+....+..+.. ++|++|+|++|+
T Consensus 37 ~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 113 (332)
T 2ft3_A 37 VVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113 (332)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSC
T ss_pred EEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCc
Confidence 4667777776 6666553 4667777777777655442 5666677777666555555554 667777777777
Q ss_pred ccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccc--cCCccccC-------------------
Q 040908 75 LTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTG--KVPQWMFG------------------- 133 (790)
Q Consensus 75 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g--~~p~~~~~------------------- 133 (790)
|+ .+|..+. ++|++|+|++|++++..+..|.++++|+.|+|++|.++. ..|..+..
T Consensus 114 l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~ 190 (332)
T 2ft3_A 114 LV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKD 190 (332)
T ss_dssp CC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSS
T ss_pred CC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCcc
Confidence 76 5665554 667777777777765444556777777777777776642 33332211
Q ss_pred --CCCcEEeccCCccccCCCCCCCCCCcceeeecCCC
Q 040908 134 --RGPENIDLSYNNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 134 --~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
.+|+.|+|++|++++..|..+..+..|+.++.+.+
T Consensus 191 ~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N 227 (332)
T 2ft3_A 191 LPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHN 227 (332)
T ss_dssp SCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSS
T ss_pred ccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 24566666666666666666666677776666554
No 301
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.66 E-value=4.6e-16 Score=182.07 Aligned_cols=167 Identities=16% Similarity=0.125 Sum_probs=98.8
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEecccc
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCN 74 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~ 74 (790)
+|+|++|+|++..|..|+.+++|+.|+|++|.+++.+|. +|+.|++++|.+...+...+.. ++|+.|+|++|.
T Consensus 79 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~ 158 (597)
T 3oja_B 79 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN 158 (597)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCc
Confidence 456666666654455566666666666666665554442 4555556666555554444433 556666666666
Q ss_pred ccccCCccccCCCCCCEEEccCCcCCcCcchhccCC-------------------------------------CCCcEEE
Q 040908 75 LTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARL-------------------------------------ADVDFIY 117 (790)
Q Consensus 75 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l-------------------------------------~~L~~L~ 117 (790)
|++..|..|+++++|++|+|++|+|++..+..+.+| ++|+.|+
T Consensus 159 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~ 238 (597)
T 3oja_B 159 LERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILK 238 (597)
T ss_dssp CCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEE
T ss_pred CCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEE
Confidence 665555556666666666666666554322222111 1233333
Q ss_pred eeCCcccccCCccccC-CCCcEEeccCCccccCCCCCCCCCCcceeeecCCCCC
Q 040908 118 LTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQNGAVNLFASSSKGS 170 (790)
Q Consensus 118 ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~~~ 170 (790)
|++|.+++ +.++.. ++|+.|+|++|.|++.+|..+..++.|..++.+.+..
T Consensus 239 L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 290 (597)
T 3oja_B 239 LQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL 290 (597)
T ss_dssp CCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCC
T ss_pred CCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCC
Confidence 33344333 123444 7899999999999999999999999999999887643
No 302
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.65 E-value=1.1e-16 Score=171.49 Aligned_cols=166 Identities=16% Similarity=0.084 Sum_probs=134.8
Q ss_pred CEEEccCCcCcccCChhh--hcccccCcccccCccccccc----------cccccceeccccCCCCCCCccccc-CcccE
Q 040908 1 MYRTVQSNRLSGELPEEL--GSLIHSGKWFGWANSVWHYF----------SESLTDLRISDLNGPEATLPDLRN-RTFKN 67 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~--~~L~~L~~L~l~~N~l~~~~----------~~~L~~L~l~~n~~~~~~~~~~~~-~~L~~ 67 (790)
++|+|++|++++.+|..+ ..+++|+.|+|++|.+++.. ..+|+.|++++|.+...+...+.. ++|++
T Consensus 94 ~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 173 (310)
T 4glp_A 94 KELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTS 173 (310)
T ss_dssp CEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCE
T ss_pred eEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCE
Confidence 579999999999999988 89999999999999998633 348899999999998777777765 88999
Q ss_pred EEecccccccc--C--CccccCCCCCCEEEccCCcCCcCcch----hccCCCCCcEEEeeCCcccccCCccccC----CC
Q 040908 68 LILRSCNLTGE--L--PHFLGEVSEMKVLDLSFNKLNGTIPE----SFARLADVDFIYLTGNLLTGKVPQWMFG----RG 135 (790)
Q Consensus 68 L~L~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~g~ip~----~~~~l~~L~~L~ls~N~l~g~~p~~~~~----~~ 135 (790)
|+|++|++.+. + +..++++++|++|+|++|+|+ .+|. .+.++++|+.|+|++|++++..|..+.. ++
T Consensus 174 L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~ 252 (310)
T 4glp_A 174 LDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSA 252 (310)
T ss_dssp EECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTT
T ss_pred EECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCc
Confidence 99999998753 3 233478899999999999997 4554 3578899999999999999887765544 48
Q ss_pred CcEEeccCCccccCCCCCCCCCCcceeeecCCCCC
Q 040908 136 PENIDLSYNNFADESSGSDCQNGAVNLFASSSKGS 170 (790)
Q Consensus 136 L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~~~ 170 (790)
|+.|+|++|+|+ .+|..++ ++|+.++.+.+.-
T Consensus 253 L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l 284 (310)
T 4glp_A 253 LNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRL 284 (310)
T ss_dssp CCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCC
T ss_pred CCEEECCCCCCC-chhhhhc--CCCCEEECCCCcC
Confidence 999999999998 6777775 6788888876643
No 303
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.65 E-value=8.9e-16 Score=154.20 Aligned_cols=152 Identities=19% Similarity=0.192 Sum_probs=119.7
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|+|++|+|++..+..|..+++|+.|++++|+++..++ .+|+.|++++|.+...+...+.. ++|++|+|++|
T Consensus 31 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 110 (208)
T 2o6s_A 31 TYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTN 110 (208)
T ss_dssp SEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCC
Confidence 478888888885555567888888888888888886654 26788888888888776665554 78888888888
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccCCCCcEEeccCCccccCCCCC
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFGRGPENIDLSYNNFADESSGS 153 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ls~N~l~g~~p~~ 153 (790)
+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|.+.+..| +|+.|+++.|+++|.+|..
T Consensus 111 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~------~l~~L~~~~n~~~g~ip~~ 184 (208)
T 2o6s_A 111 QLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP------GIRYLSEWINKHSGVVRNS 184 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT------TTHHHHHHHHHCTTTBBCT
T ss_pred cCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC------CHHHHHHHHHhCCceeecc
Confidence 8886666667888888888888888886666668888888888888888876554 5788888888888888887
Q ss_pred CCCCC
Q 040908 154 DCQNG 158 (790)
Q Consensus 154 ~~~~~ 158 (790)
++.+.
T Consensus 185 ~~~l~ 189 (208)
T 2o6s_A 185 AGSVA 189 (208)
T ss_dssp TSSBC
T ss_pred Ccccc
Confidence 76543
No 304
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.65 E-value=4e-16 Score=177.37 Aligned_cols=169 Identities=12% Similarity=0.007 Sum_probs=148.1
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|+|++|+|++..|..|.+|++|+.|+|++|.++..++ .+|+.|++++|.+.......+.. ++|+.|+|++|
T Consensus 59 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n 138 (477)
T 2id5_A 59 EELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDN 138 (477)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCT
T ss_pred CEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCC
Confidence 579999999998889999999999999999999987765 37899999999998777666666 89999999999
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCC
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSG 152 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~ 152 (790)
.+++..|..|.++++|++|+|++|++++..+..|.++++|+.|+|++|.+.+..+..+.. .+|+.|+|++|++.+.+|.
T Consensus 139 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 218 (477)
T 2id5_A 139 DLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTP 218 (477)
T ss_dssp TCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECT
T ss_pred ccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCc
Confidence 999888999999999999999999999766678999999999999999999887777766 8899999999888888887
Q ss_pred CCCCCCcceeeecCCCC
Q 040908 153 SDCQNGAVNLFASSSKG 169 (790)
Q Consensus 153 ~~~~~~~l~~~~~~~~~ 169 (790)
.......|+.++.+.+.
T Consensus 219 ~~~~~~~L~~L~l~~n~ 235 (477)
T 2id5_A 219 NCLYGLNLTSLSITHCN 235 (477)
T ss_dssp TTTTTCCCSEEEEESSC
T ss_pred ccccCccccEEECcCCc
Confidence 77777778888776653
No 305
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.64 E-value=2.4e-16 Score=184.74 Aligned_cols=169 Identities=15% Similarity=0.070 Sum_probs=143.7
Q ss_pred CEEEccCCcCcccC--ChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCcc-ccc-CcccEEEe
Q 040908 1 MYRTVQSNRLSGEL--PEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPD-LRN-RTFKNLIL 70 (790)
Q Consensus 1 ~~L~Ls~N~l~g~i--P~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~-~~~-~~L~~L~L 70 (790)
++|+|++|++++.. |..++.+++|+.|++++|.+.+..|. +|+.|++++|.+.....+. +.. ++|+.|+|
T Consensus 353 ~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 432 (606)
T 3t6q_A 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNL 432 (606)
T ss_dssp CEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEEC
T ss_pred CEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEEC
Confidence 57999999999765 77899999999999999998876553 7888899999887655443 444 88999999
Q ss_pred ccccccccCCccccCCCCCCEEEccCCcCCcC---cchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCcc
Q 040908 71 RSCNLTGELPHFLGEVSEMKVLDLSFNKLNGT---IPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNF 146 (790)
Q Consensus 71 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~---ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l 146 (790)
++|.+++..|..|+++++|++|+|++|++++. .+..+..+++|+.|+|++|++++..|..+.. ++|+.|+|++|++
T Consensus 433 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 512 (606)
T 3t6q_A 433 SHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRL 512 (606)
T ss_dssp TTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCcc
Confidence 99999988899999999999999999999863 3367899999999999999999888888877 8899999999999
Q ss_pred ccCCCCCCCCCCcceeeecCCCCC
Q 040908 147 ADESSGSDCQNGAVNLFASSSKGS 170 (790)
Q Consensus 147 ~g~~p~~~~~~~~l~~~~~~~~~~ 170 (790)
++..|..+..+..| .++.+.+.-
T Consensus 513 ~~~~~~~l~~l~~L-~L~L~~N~l 535 (606)
T 3t6q_A 513 TSSSIEALSHLKGI-YLNLASNHI 535 (606)
T ss_dssp CGGGGGGGTTCCSC-EEECCSSCC
T ss_pred CcCChhHhCccccc-EEECcCCcc
Confidence 99999999999999 888776643
No 306
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.64 E-value=5.4e-16 Score=184.29 Aligned_cols=167 Identities=15% Similarity=0.073 Sum_probs=144.6
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|+|++|+|++..|..|+++++|+.|+|++|.+++..|. +|+.|++++|.+...+...+.. ++|++|+|++|
T Consensus 28 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n 107 (680)
T 1ziw_A 28 TVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSN 107 (680)
T ss_dssp SEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSS
T ss_pred cEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCC
Confidence 4799999999976666799999999999999999987764 7899999999988877766666 89999999999
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCcccc--C-CCCcEEeccCCccccCC
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMF--G-RGPENIDLSYNNFADES 150 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~--~-~~L~~l~ls~N~l~g~~ 150 (790)
++++..|..|+++++|++|+|++|++++..|..+.++++|+.|+|++|++++..|..+. . .+|+.|+|++|++++..
T Consensus 108 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 187 (680)
T 1ziw_A 108 SIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFS 187 (680)
T ss_dssp CCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBC
T ss_pred ccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccC
Confidence 99977778899999999999999999988888999999999999999999987776543 2 78999999999999999
Q ss_pred CCCCCCCCcceeeecCC
Q 040908 151 SGSDCQNGAVNLFASSS 167 (790)
Q Consensus 151 p~~~~~~~~l~~~~~~~ 167 (790)
|..+..+..|..+..+.
T Consensus 188 ~~~~~~l~~L~~L~l~~ 204 (680)
T 1ziw_A 188 PGCFHAIGRLFGLFLNN 204 (680)
T ss_dssp TTGGGGSSEECEEECTT
T ss_pred hhhhhhhhhhhhhhccc
Confidence 98888888877776543
No 307
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.64 E-value=4.4e-16 Score=180.87 Aligned_cols=168 Identities=15% Similarity=0.105 Sum_probs=130.7
Q ss_pred CEEEccCCcCcccC--ChhhhcccccCcccccCcccccccc-----ccccceeccccCCCCCCC-ccccc-CcccEEEec
Q 040908 1 MYRTVQSNRLSGEL--PEELGSLIHSGKWFGWANSVWHYFS-----ESLTDLRISDLNGPEATL-PDLRN-RTFKNLILR 71 (790)
Q Consensus 1 ~~L~Ls~N~l~g~i--P~~~~~L~~L~~L~l~~N~l~~~~~-----~~L~~L~l~~n~~~~~~~-~~~~~-~~L~~L~L~ 71 (790)
++|+|++|++++.. |..+..+++|+.|++++|.+.+.++ .+|+.|++++|.+..... ..+.. ++|++|+|+
T Consensus 350 ~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~ 429 (570)
T 2z63_A 350 EFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS 429 (570)
T ss_dssp CEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECT
T ss_pred CEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCc
Confidence 46788888887543 6778888888888888888776554 377788888877765543 33443 778888888
Q ss_pred cccccccCCccccCCCCCCEEEccCCcCC-cCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccC
Q 040908 72 SCNLTGELPHFLGEVSEMKVLDLSFNKLN-GTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADE 149 (790)
Q Consensus 72 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~ 149 (790)
+|++.+.+|..|.++++|++|+|++|+++ +.+|..|..+++|+.|+|++|++++..|..+.. ++|+.|+|++|+|++.
T Consensus 430 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 509 (570)
T 2z63_A 430 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSV 509 (570)
T ss_dssp TSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCC
Confidence 88888888888888888888888888887 578888888888888888888888877877766 7888888888888887
Q ss_pred CCCCCCCCCcceeeecCCC
Q 040908 150 SSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 150 ~p~~~~~~~~l~~~~~~~~ 168 (790)
.|..+..+++|+.++.+.+
T Consensus 510 ~~~~~~~l~~L~~L~l~~N 528 (570)
T 2z63_A 510 PDGIFDRLTSLQKIWLHTN 528 (570)
T ss_dssp CTTTTTTCTTCCEEECCSS
T ss_pred CHHHhhcccCCcEEEecCC
Confidence 7777888888888877655
No 308
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.64 E-value=6.1e-16 Score=181.23 Aligned_cols=167 Identities=12% Similarity=0.054 Sum_probs=118.1
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|+|++|+|++..|..|.++++|+.|+|++|.+++..|. +|+.|++++|.+....+..+.. ++|++|+|++|
T Consensus 35 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 114 (606)
T 3vq2_A 35 KNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVET 114 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTS
T ss_pred CEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCC
Confidence 3677888888766666777788888888888877766553 6777777777777665555655 77777788777
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCc-CcchhccCCCCCcEEEeeCCcccccCCccccC-CC----CcEEeccCCccc
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNG-TIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RG----PENIDLSYNNFA 147 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~----L~~l~ls~N~l~ 147 (790)
++++..|..|+++++|++|+|++|++++ .+|..|+++++|+.|+|++|++++..|..+.. .+ +..|++++|+++
T Consensus 115 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~ 194 (606)
T 3vq2_A 115 KLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPID 194 (606)
T ss_dssp CCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCC
T ss_pred ccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcc
Confidence 7776666677777778888887777765 56777777777888888777777766665544 22 447777777777
Q ss_pred cCCCCCCCCCCcceeeecCCC
Q 040908 148 DESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 148 g~~p~~~~~~~~l~~~~~~~~ 168 (790)
+..+..+... +|+.++.+.+
T Consensus 195 ~~~~~~~~~~-~L~~L~L~~n 214 (606)
T 3vq2_A 195 FIQDQAFQGI-KLHELTLRGN 214 (606)
T ss_dssp EECTTTTTTC-EEEEEEEESC
T ss_pred eeCcccccCc-eeeeeeccCC
Confidence 6555554443 6777766554
No 309
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=6.2e-16 Score=186.49 Aligned_cols=166 Identities=18% Similarity=0.179 Sum_probs=139.6
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcc-ccc-cccc-------------cccceeccccCCCCCCC-ccccc-C
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANS-VWH-YFSE-------------SLTDLRISDLNGPEATL-PDLRN-R 63 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~-l~~-~~~~-------------~L~~L~l~~n~~~~~~~-~~~~~-~ 63 (790)
++|+|++|++.|.+|..|++|++|+.|+|++|+ +++ .+|. +|+.|++++|.+...+. ..+.. +
T Consensus 494 ~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~ 573 (876)
T 4ecn_A 494 TDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMV 573 (876)
T ss_dssp CEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCT
T ss_pred CEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCC
Confidence 579999999999999999999999999999998 887 5553 79999999999984443 13544 8
Q ss_pred cccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCC-CcEEEeeCCcccccCCccccC---CCCcEE
Q 040908 64 TFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLAD-VDFIYLTGNLLTGKVPQWMFG---RGPENI 139 (790)
Q Consensus 64 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~-L~~L~ls~N~l~g~~p~~~~~---~~L~~l 139 (790)
+|+.|+|++|+|+ .+| .|+++++|+.|+|++|+|+ .+|..+.++++ |+.|+|++|+++ .+|..+.. .+|+.|
T Consensus 574 ~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L 649 (876)
T 4ecn_A 574 KLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSV 649 (876)
T ss_dssp TCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEE
T ss_pred CCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEE
Confidence 9999999999999 899 8999999999999999999 89999999999 999999999999 77877655 349999
Q ss_pred eccCCccccCCCCCCC-----CCCcceeeecCCCCC
Q 040908 140 DLSYNNFADESSGSDC-----QNGAVNLFASSSKGS 170 (790)
Q Consensus 140 ~ls~N~l~g~~p~~~~-----~~~~l~~~~~~~~~~ 170 (790)
+|++|+|+|.+|...+ ...+|+.++.+.+..
T Consensus 650 ~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L 685 (876)
T 4ecn_A 650 DFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEI 685 (876)
T ss_dssp ECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCC
T ss_pred ECcCCcCCCccccchhhhccccCCCcCEEEccCCcC
Confidence 9999999997775432 234688888776543
No 310
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.63 E-value=1.4e-15 Score=168.14 Aligned_cols=166 Identities=16% Similarity=0.130 Sum_probs=88.0
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEecccc
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCN 74 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~ 74 (790)
+|+|++|+|++..|..|..+++|+.|+|++|.+++.+|. +|+.|++++|.+...+...+.. ++|++|+|++|+
T Consensus 73 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~ 152 (390)
T 3o6n_A 73 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN 152 (390)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCc
Confidence 445555555533333455555555555555555444332 3444555555554444333332 455555555555
Q ss_pred ccccCCccccCCCCCCEEEccCCcCCcCcchhccCC-------------------------------------CCCcEEE
Q 040908 75 LTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARL-------------------------------------ADVDFIY 117 (790)
Q Consensus 75 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l-------------------------------------~~L~~L~ 117 (790)
+++..|..|+++++|++|+|++|++++.-...+.+| ++|+.|+
T Consensus 153 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~ 232 (390)
T 3o6n_A 153 LERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILK 232 (390)
T ss_dssp CCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEE
T ss_pred cCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEE
Confidence 554444445555555555555555543211111111 1233333
Q ss_pred eeCCcccccCCccccC-CCCcEEeccCCccccCCCCCCCCCCcceeeecCCCC
Q 040908 118 LTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 118 ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~~ 169 (790)
|++|++++. ..+.. ++|+.|+|++|.+++..|..+..+++|+.++.+.+.
T Consensus 233 l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 283 (390)
T 3o6n_A 233 LQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNR 283 (390)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSC
T ss_pred CCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCc
Confidence 333333321 22333 788999999999999889999999999999987764
No 311
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.63 E-value=5.2e-16 Score=169.29 Aligned_cols=149 Identities=13% Similarity=0.030 Sum_probs=74.7
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCC-ccccc-CcccEEEeccc
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATL-PDLRN-RTFKNLILRSC 73 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~-~~~~~-~~L~~L~L~~N 73 (790)
+|+|++|+|++..|..|+++++|++|+|++|++++.++. +|+.|++++|.+...+. ..+.. ++|++|+|++|
T Consensus 80 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n 159 (353)
T 2z80_A 80 ALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNM 159 (353)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEES
T ss_pred EEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCC
Confidence 445555555544444455555555555555555443321 45555555555544333 22332 45555555555
Q ss_pred -cccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCC
Q 040908 74 -NLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADES 150 (790)
Q Consensus 74 -~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~ 150 (790)
.+.+..|..|+++++|++|+|++|++++..|..|.++++|+.|+|++|++....+..+.. ++|+.|+|++|++++..
T Consensus 160 ~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 238 (353)
T 2z80_A 160 DTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFH 238 (353)
T ss_dssp SSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCC
T ss_pred ccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccc
Confidence 244333445555555555555555555555555555555555555555543221111222 56777777777777643
No 312
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.63 E-value=1.1e-15 Score=175.81 Aligned_cols=118 Identities=18% Similarity=0.096 Sum_probs=84.6
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCcccccCcccEEEecccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRNRTFKNLILRSCN 74 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~ 74 (790)
++|+|++|+|++..|..|.++++|++|+|++|++++..|. +|+.|++++|.+...+.. ..++|++|+|++|+
T Consensus 24 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~L~~N~ 101 (520)
T 2z7x_B 24 TILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH--PTVNLKHLDLSFNA 101 (520)
T ss_dssp SEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC--CCCCCSEEECCSSC
T ss_pred cEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc--ccCCccEEeccCCc
Confidence 4688888888866667888888888888888888877553 678888888887754433 44788888888888
Q ss_pred ccc-cCCccccCCCCCCEEEccCCcCCcCcchhccCCCCC--cEEEeeCCcc
Q 040908 75 LTG-ELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADV--DFIYLTGNLL 123 (790)
Q Consensus 75 l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L--~~L~ls~N~l 123 (790)
|++ .+|..|+++++|++|+|++|++++ ..+..+++| +.|+|++|++
T Consensus 102 l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 102 FDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGET 150 (520)
T ss_dssp CSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTT
T ss_pred cccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccc
Confidence 886 477888888888888888887764 223333343 4444444444
No 313
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.63 E-value=8.2e-16 Score=180.17 Aligned_cols=170 Identities=16% Similarity=0.076 Sum_probs=150.4
Q ss_pred CEEEccCCcCcccCChh-hhcccccCcccccCccccccc--c------ccccceeccccCCCCCCCccccc-CcccEEEe
Q 040908 1 MYRTVQSNRLSGELPEE-LGSLIHSGKWFGWANSVWHYF--S------ESLTDLRISDLNGPEATLPDLRN-RTFKNLIL 70 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~-~~~L~~L~~L~l~~N~l~~~~--~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L 70 (790)
++|+|++|.+.+.+|.. +..+++|+.|++++|.+++.. + .+|+.|++++|.+.......+.. ++|+.|+|
T Consensus 328 ~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 407 (606)
T 3t6q_A 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407 (606)
T ss_dssp SEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEEC
T ss_pred CEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEEC
Confidence 57999999999888875 999999999999999998764 2 38999999999988776666665 89999999
Q ss_pred ccccccccCCcc-ccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCccccc---CCccccC-CCCcEEeccCCc
Q 040908 71 RSCNLTGELPHF-LGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGK---VPQWMFG-RGPENIDLSYNN 145 (790)
Q Consensus 71 ~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~---~p~~~~~-~~L~~l~ls~N~ 145 (790)
++|++++..|.. |.++++|++|+|++|++++..|..|.++++|+.|+|++|++++. .+..+.. ++|+.|+|++|+
T Consensus 408 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~ 487 (606)
T 3t6q_A 408 AFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD 487 (606)
T ss_dssp TTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSC
T ss_pred CCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCc
Confidence 999999887765 89999999999999999999999999999999999999999873 2345555 899999999999
Q ss_pred cccCCCCCCCCCCcceeeecCCCCC
Q 040908 146 FADESSGSDCQNGAVNLFASSSKGS 170 (790)
Q Consensus 146 l~g~~p~~~~~~~~l~~~~~~~~~~ 170 (790)
+++..|..+..++.|+.++.+.+.-
T Consensus 488 l~~~~~~~~~~l~~L~~L~Ls~N~l 512 (606)
T 3t6q_A 488 LSSIDQHAFTSLKMMNHVDLSHNRL 512 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCC
T ss_pred cCccChhhhccccCCCEEECCCCcc
Confidence 9999999999999999999987743
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.63 E-value=2e-16 Score=169.99 Aligned_cols=166 Identities=17% Similarity=0.095 Sum_probs=91.3
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCc-----------------c
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLP-----------------D 59 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~-----------------~ 59 (790)
++|+|++|+|++..|..|..+++|+.|+|++|.+++..+ .+|+.|++++|.+...+.. .
T Consensus 37 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~ 116 (317)
T 3o53_A 37 KELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSC 116 (317)
T ss_dssp SEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEEETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEE
T ss_pred CEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchhhhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCc
Confidence 468888888886666788888888888888888875443 3667777777655432211 0
Q ss_pred cccCcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhcc-CCCCCcEEEeeCCcccccCCccccCCCCcE
Q 040908 60 LRNRTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFA-RLADVDFIYLTGNLLTGKVPQWMFGRGPEN 138 (790)
Q Consensus 60 ~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~ 138 (790)
...++|+.|+|++|+|++..|..++.+++|++|+|++|++++..|..+. .+++|+.|+|++|++++. |.....++|+.
T Consensus 117 ~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~ 195 (317)
T 3o53_A 117 SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKT 195 (317)
T ss_dssp CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCE
T ss_pred cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCE
Confidence 0013455555555555544444555555555555555555544444442 455555555555555533 22222345555
Q ss_pred EeccCCccccCCCCCCCCCCcceeeecCCC
Q 040908 139 IDLSYNNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 139 l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
|+|++|+|++. |..+..++.|+.++.+.+
T Consensus 196 L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N 224 (317)
T 3o53_A 196 LDLSSNKLAFM-GPEFQSAAGVTWISLRNN 224 (317)
T ss_dssp EECCSSCCCEE-CGGGGGGTTCSEEECTTS
T ss_pred EECCCCcCCcc-hhhhcccCcccEEECcCC
Confidence 55555555543 223444455555554433
No 315
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=3.4e-16 Score=170.06 Aligned_cols=137 Identities=13% Similarity=0.166 Sum_probs=99.3
Q ss_pred CcceeeeecccCcEEEEeeeecCCcEEEEEEccccch--------------hcHHH--------HHHHHHHhhccCCCce
Q 040908 447 HFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSK--------------QGNRE--------FVNEIGTISALQHPHL 504 (790)
Q Consensus 447 ~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~--------------~~~~~--------~~~E~~~l~~l~H~ni 504 (790)
-|++.+.||+|+||.||+|...+|+.||||+++.... ..... ...|...|.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3999999999999999999988999999998753210 00111 2345666666654443
Q ss_pred eeeeeEEEeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecC
Q 040908 505 VKLYGCCIEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDK 584 (790)
Q Consensus 505 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~ 584 (790)
.-..-+... ..++||||+++++|.++.. ......++.|++.+|.|||..+ ||||||||.|||+++
T Consensus 176 ~vp~p~~~~--~~~LVME~i~G~~L~~l~~----------~~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 176 PVPEPIAQS--RHTIVMSLVDALPMRQVSS----------VPDPASLYADLIALILRLAKHG---LIHGDFNEFNILIRE 240 (397)
T ss_dssp SCCCEEEEE--TTEEEEECCSCEEGGGCCC----------CSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEE
T ss_pred CCCeeeecc--CceEEEEecCCccHhhhcc----------cHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeC
Confidence 221111111 2379999999988876541 1234568899999999999885 999999999999988
Q ss_pred CCC----------eEEeecCCccc
Q 040908 585 DLN----------PKISDFGLAKL 598 (790)
Q Consensus 585 ~~~----------~kl~DFGla~~ 598 (790)
++. +.|+||+-+..
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCCcccccccccceEEEEeCCccc
Confidence 773 89999997763
No 316
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.6e-16 Score=173.34 Aligned_cols=163 Identities=15% Similarity=0.078 Sum_probs=121.8
Q ss_pred EEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 3 RTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 3 L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
.++++|+++ .+|..+. ++|+.|++++|.+++..+ .+|+.|++++|.+.......+.. ++|++|+|++|+|
T Consensus 36 c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (353)
T 2z80_A 36 CKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112 (353)
T ss_dssp EECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcC
Confidence 577788887 7777655 478888888888876655 26777788888777665555555 7888888888888
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcch--hccCCCCCcEEEeeCCc-ccccCCccccC-CCCcEEeccCCccccCCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPE--SFARLADVDFIYLTGNL-LTGKVPQWMFG-RGPENIDLSYNNFADESS 151 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~--~~~~l~~L~~L~ls~N~-l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p 151 (790)
++..+..|+++++|++|+|++|+++ .+|. .|.++++|+.|+|++|+ +.+..|..+.. ++|+.|+|++|++++..|
T Consensus 113 ~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 191 (353)
T 2z80_A 113 SNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEP 191 (353)
T ss_dssp SSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred CcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCH
Confidence 8443344788888888888888887 5554 67888888888888884 66555666655 778888888888888888
Q ss_pred CCCCCCCcceeeecCCCC
Q 040908 152 GSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~ 169 (790)
..+..+.+|+.++.+.+.
T Consensus 192 ~~l~~l~~L~~L~l~~n~ 209 (353)
T 2z80_A 192 KSLKSIQNVSHLILHMKQ 209 (353)
T ss_dssp TTTTTCSEEEEEEEECSC
T ss_pred HHHhccccCCeecCCCCc
Confidence 888888888888776554
No 317
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.62 E-value=3.5e-16 Score=171.35 Aligned_cols=156 Identities=16% Similarity=0.088 Sum_probs=124.8
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc-------ccccceeccccCCCCCCCccccc-CcccEEEecc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS-------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRS 72 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~-------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~ 72 (790)
+.+++++|+|+ .+|..+. ..|+.|+|++|+|++..+ .+|+.|+|++|.+...+...+.. ++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 36899999998 7898765 458899999999987654 36788889888888777666666 8899999999
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccc---cC-CCCcEEeccCCcccc
Q 040908 73 CNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWM---FG-RGPENIDLSYNNFAD 148 (790)
Q Consensus 73 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~---~~-~~L~~l~ls~N~l~g 148 (790)
|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+ .. ++|+.|||++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99997777788999999999999999997778889999999999999999986544444 23 789999999999986
Q ss_pred CCCCCCCCCCc
Q 040908 149 ESSGSDCQNGA 159 (790)
Q Consensus 149 ~~p~~~~~~~~ 159 (790)
..+..+..+..
T Consensus 178 l~~~~~~~l~~ 188 (361)
T 2xot_A 178 LPLTDLQKLPA 188 (361)
T ss_dssp CCHHHHHHSCH
T ss_pred cCHHHhhhccH
Confidence 55455544443
No 318
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.62 E-value=3e-16 Score=167.99 Aligned_cols=164 Identities=18% Similarity=0.076 Sum_probs=131.3
Q ss_pred CEEEccCCcCcccCC----hhhhcccccCcccccCccccccccc------cccceeccccCCCC---CCCccc--ccCcc
Q 040908 1 MYRTVQSNRLSGELP----EELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPE---ATLPDL--RNRTF 65 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP----~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~---~~~~~~--~~~~L 65 (790)
++|+|++|+|++..| ..+..+++|+.|+|++|.+.+.++. +|+.|++++|.+.. .+.... ..++|
T Consensus 120 ~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L 199 (310)
T 4glp_A 120 SSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAI 199 (310)
T ss_dssp SSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCC
T ss_pred CEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCC
Confidence 468999999998766 3556799999999999999877653 78999999998753 222221 23789
Q ss_pred cEEEeccccccccCCc----cccCCCCCCEEEccCCcCCcCcchhccCC---CCCcEEEeeCCcccccCCccccCCCCcE
Q 040908 66 KNLILRSCNLTGELPH----FLGEVSEMKVLDLSFNKLNGTIPESFARL---ADVDFIYLTGNLLTGKVPQWMFGRGPEN 138 (790)
Q Consensus 66 ~~L~L~~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l---~~L~~L~ls~N~l~g~~p~~~~~~~L~~ 138 (790)
++|+|++|+|+ .+|. .++++++|++|+|++|+|++.+|..+..+ ++|+.|+|++|+|+ .+|..+. ++|+.
T Consensus 200 ~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~-~~L~~ 276 (310)
T 4glp_A 200 QNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP-AKLRV 276 (310)
T ss_dssp CSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC-SCCSC
T ss_pred CEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc-CCCCE
Confidence 99999999997 4444 25789999999999999998889888887 69999999999999 6676664 78999
Q ss_pred EeccCCccccCCCCCCCCCCcceeeecCCCC
Q 040908 139 IDLSYNNFADESSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 139 l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~~ 169 (790)
|||++|+|++. |. +..++.|+.++.+.+.
T Consensus 277 L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~ 305 (310)
T 4glp_A 277 LDLSSNRLNRA-PQ-PDELPEVDNLTLDGNP 305 (310)
T ss_dssp EECCSCCCCSC-CC-TTSCCCCSCEECSSTT
T ss_pred EECCCCcCCCC-ch-hhhCCCccEEECcCCC
Confidence 99999999974 32 4566778887776553
No 319
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.61 E-value=1.8e-15 Score=176.99 Aligned_cols=167 Identities=13% Similarity=0.022 Sum_probs=135.9
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
..|+|++|.++...+..|.++++|+.|+|++|.+++.++. +|+.|++++|.+...++..+.. ++|++|+|++|
T Consensus 54 ~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 133 (597)
T 3oja_B 54 KIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERN 133 (597)
T ss_dssp SEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCC
Confidence 3689999999854444578999999999999999987763 7999999999999888777766 89999999999
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC--------------------
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-------------------- 133 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-------------------- 133 (790)
.|++..+..|+++++|++|+|++|+|++..|..|+++++|+.|+|++|.+++..+..+..
T Consensus 134 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L 213 (597)
T 3oja_B 134 DLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAV 213 (597)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTC
T ss_pred CCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchh
Confidence 999555556799999999999999999888889999999999999999998753222110
Q ss_pred ------------------CCCcEEeccCCccccCCCCCCCCCCcceeeecCCCC
Q 040908 134 ------------------RGPENIDLSYNNFADESSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 134 ------------------~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~~ 169 (790)
.+|+.|+|++|+|++ +..+..++.|..++.+.+.
T Consensus 214 ~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~ 265 (597)
T 3oja_B 214 EELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNE 265 (597)
T ss_dssp SEEECCSSCCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSC
T ss_pred heeeccCCcccccccccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCc
Confidence 245666666666665 3567778888888887654
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.61 E-value=7.4e-16 Score=175.59 Aligned_cols=162 Identities=16% Similarity=0.054 Sum_probs=134.5
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----------------------ccccceeccccCCCCCCCc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----------------------ESLTDLRISDLNGPEATLP 58 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----------------------~~L~~L~l~~n~~~~~~~~ 58 (790)
++|+|++|+|++.+| |+.+++|+.|+|++|.+++.++ .+|+.|++++|.+....+.
T Consensus 61 ~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~ 138 (487)
T 3oja_A 61 ELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDL 138 (487)
T ss_dssp CEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSGGGB
T ss_pred CEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCCCCch
Confidence 479999999997666 8889999999998888876543 2567777777777766555
Q ss_pred cccc-CcccEEEeccccccccCCcccc-CCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CC
Q 040908 59 DLRN-RTFKNLILRSCNLTGELPHFLG-EVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RG 135 (790)
Q Consensus 59 ~~~~-~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~ 135 (790)
.+.. ++|+.|+|++|.|++.+|..+. ++++|++|+|++|+|++. |. +..+++|+.|+|++|+|++.+|. +.. ++
T Consensus 139 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~ 215 (487)
T 3oja_A 139 DEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE-FQSAAG 215 (487)
T ss_dssp CGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG-GGGGTT
T ss_pred hhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHh-HcCCCC
Confidence 5555 8999999999999999999886 799999999999999965 43 45699999999999999987666 544 89
Q ss_pred CcEEeccCCccccCCCCCCCCCCcceeeecCCC
Q 040908 136 PENIDLSYNNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 136 L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
|+.|+|++|+|++ +|..+..++.|..++.+.+
T Consensus 216 L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N 247 (487)
T 3oja_A 216 VTWISLRNNKLVL-IEKALRFSQNLEHFDLRGN 247 (487)
T ss_dssp CSEEECTTSCCCE-ECTTCCCCTTCCEEECTTC
T ss_pred ccEEEecCCcCcc-cchhhccCCCCCEEEcCCC
Confidence 9999999999996 6778888888988887654
No 321
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.61 E-value=2.3e-15 Score=174.90 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=86.5
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCcccccCcccEEEecccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRNRTFKNLILRSCN 74 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~ 74 (790)
++|+|++|+|++..|..|.++++|++|+|++|++++..|. +|+.|++++|.+...+.. ..++|++|+|++|+
T Consensus 55 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~Ls~N~ 132 (562)
T 3a79_B 55 KALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC--PMASLRHLDLSFND 132 (562)
T ss_dssp CEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC--CCTTCSEEECCSSC
T ss_pred CEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc--ccccCCEEECCCCC
Confidence 4688888888866667888888888888888888877653 678888888888755544 44788888888888
Q ss_pred ccc-cCCccccCCCCCCEEEccCCcCCcCcchhccCCCCC--cEEEeeCCcc
Q 040908 75 LTG-ELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADV--DFIYLTGNLL 123 (790)
Q Consensus 75 l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L--~~L~ls~N~l 123 (790)
|++ .+|..|+++++|++|+|++|++++. .+..+++| +.|+|++|++
T Consensus 133 l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 133 FDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp CSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSC
T ss_pred ccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccc
Confidence 886 4567888888888888888887642 23333333 5555555555
No 322
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.61 E-value=1.5e-15 Score=147.06 Aligned_cols=128 Identities=16% Similarity=0.093 Sum_probs=101.0
Q ss_pred CEEEccCCcCc-ccCChhhhcccccCcccccCccccccccccccceeccccCCCCCCCcccccCcccEEEeccccccccC
Q 040908 1 MYRTVQSNRLS-GELPEELGSLIHSGKWFGWANSVWHYFSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGEL 79 (790)
Q Consensus 1 ~~L~Ls~N~l~-g~iP~~~~~L~~L~~L~l~~N~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~ 79 (790)
++|+|++|+|+ +.+|..+..+++|+.|++++|.+++. ..+..+ ++|++|+|++|+|++.+
T Consensus 27 ~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l-----------------~~L~~L~Ls~N~l~~~~ 87 (168)
T 2ell_A 27 RELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKL-----------------PKLKKLELSENRIFGGL 87 (168)
T ss_dssp SEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCC-----------------SSCCEEEEESCCCCSCC
T ss_pred CEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccC-----------------CCCCEEECcCCcCchHH
Confidence 46788888887 67787778888888888877777653 222222 68999999999999778
Q ss_pred CccccCCCCCCEEEccCCcCCcCcc--hhccCCCCCcEEEeeCCcccccCC---ccccC-CCCcEEeccCCcccc
Q 040908 80 PHFLGEVSEMKVLDLSFNKLNGTIP--ESFARLADVDFIYLTGNLLTGKVP---QWMFG-RGPENIDLSYNNFAD 148 (790)
Q Consensus 80 p~~~~~l~~L~~L~Ls~N~l~g~ip--~~~~~l~~L~~L~ls~N~l~g~~p---~~~~~-~~L~~l~ls~N~l~g 148 (790)
|..+.++++|++|+|++|+|++ +| ..+..+++|+.|+|++|.+++..+ ..+.. ++|+.|++++|.++.
T Consensus 88 ~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 88 DMLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CHHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred HHHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 8888889999999999999984 44 788999999999999999987665 35555 889999999998863
No 323
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.61 E-value=1.6e-15 Score=176.23 Aligned_cols=167 Identities=14% Similarity=0.091 Sum_probs=141.4
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|||++|+|++..|..|.++++|+.|+|++|++++..+. +|+.|++++|.+...+...+.. ++|++|+|++|
T Consensus 31 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 110 (570)
T 2z63_A 31 KNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110 (570)
T ss_dssp CEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccccc
Confidence 4799999999977777899999999999999999877653 7888899999888777666766 88999999999
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCc-CcchhccCCCCCcEEEeeCCcccccCCccccC-CCC----cEEeccCCccc
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNG-TIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGP----ENIDLSYNNFA 147 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L----~~l~ls~N~l~ 147 (790)
++++..+..|+++++|++|+|++|++++ .+|..|+++++|+.|++++|++++..|..+.. .+| ..|++++|.++
T Consensus 111 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~ 190 (570)
T 2z63_A 111 NLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 190 (570)
T ss_dssp CCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC
T ss_pred ccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCce
Confidence 9996555579999999999999999986 47999999999999999999999887777665 666 78999999999
Q ss_pred cCCCCCCCCCCcceeeecCCC
Q 040908 148 DESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 148 g~~p~~~~~~~~l~~~~~~~~ 168 (790)
+..|..+... .|+.++.+.+
T Consensus 191 ~~~~~~~~~~-~L~~L~l~~n 210 (570)
T 2z63_A 191 FIQPGAFKEI-RLHKLTLRNN 210 (570)
T ss_dssp EECTTTTTTC-EEEEEEEESC
T ss_pred ecCHHHhccC-cceeEecccc
Confidence 8888777665 7888877654
No 324
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.61 E-value=1.6e-15 Score=178.17 Aligned_cols=154 Identities=16% Similarity=0.092 Sum_probs=105.5
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEeccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSC 73 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N 73 (790)
++|||++|+|++..|..|.+|++|++|+|++|+|+++++. +|+.|+|++|.+...+...|.. ++|++|+|++|
T Consensus 55 ~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N 134 (635)
T 4g8a_A 55 KNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 134 (635)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTS
T ss_pred CEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCC
Confidence 4688888888855556788888888888888888876653 5666677777776666655555 67777777777
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCc-CcchhccCCCCCcEEEeeCCcccccCCccccC-----CCCcEEeccCCccc
Q 040908 74 NLTGELPHFLGEVSEMKVLDLSFNKLNG-TIPESFARLADVDFIYLTGNLLTGKVPQWMFG-----RGPENIDLSYNNFA 147 (790)
Q Consensus 74 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-----~~L~~l~ls~N~l~ 147 (790)
+|++..+..|++|++|++|+|++|++++ .+|..++++++|+.|+|++|++++..|..+.. ..+..++++.|.++
T Consensus 135 ~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~ 214 (635)
T 4g8a_A 135 NLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 214 (635)
T ss_dssp CCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC
T ss_pred cCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCccc
Confidence 7775555567777777777777777754 35666777777777777777777666655433 12345677777776
Q ss_pred cCCCCCC
Q 040908 148 DESSGSD 154 (790)
Q Consensus 148 g~~p~~~ 154 (790)
...+..+
T Consensus 215 ~i~~~~~ 221 (635)
T 4g8a_A 215 FIQPGAF 221 (635)
T ss_dssp EECTTTT
T ss_pred ccCcccc
Confidence 5444433
No 325
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.61 E-value=2.7e-15 Score=149.42 Aligned_cols=145 Identities=13% Similarity=0.129 Sum_probs=108.5
Q ss_pred hcccccCcccccCcccccccc----ccccceeccccCCCCCCCccccc-CcccEEEeccccccccCCccccCCCCCCEEE
Q 040908 19 GSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNLTGELPHFLGEVSEMKVLD 93 (790)
Q Consensus 19 ~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 93 (790)
+.+++|+.|++++|.+...+. .+|+.|++++|.+... +.+.. ++|++|+|++|++++..|..|++|++|++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLTGIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCTTGGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred hhcCCccEEeccCCCccChHHHhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 555566666666666653221 2566666666644332 23333 7899999999999988888999999999999
Q ss_pred ccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCCCCCCcceeeecCCC
Q 040908 94 LSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 94 Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
|++|++++..|..+..+++|+.|+|++|++.+.+|. +.. ++|+.|+|++|++++. + .+..+++|+.++.+.+
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~-l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP-LKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGG-GGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHh-hcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCc
Confidence 999999988899999999999999999984445664 444 8899999999999863 3 6777888888877654
No 326
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.60 E-value=2.8e-15 Score=160.32 Aligned_cols=159 Identities=14% Similarity=0.158 Sum_probs=127.7
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
++|+|++|+|+ .+| .+..+++|+.|+|++|.+.+..+ .+|+.|++++|.+...+ .+.. ++|+.|+|++|+|
T Consensus 44 ~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~l~~n~l 119 (308)
T 1h6u_A 44 TTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVS--AIAGLQSIKTLDLTSTQI 119 (308)
T ss_dssp CEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCCG--GGTTCTTCCEEECTTSCC
T ss_pred CEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChhHccCCCCCEEEccCCcCCCch--hhcCCCCCCEEECCCCCC
Confidence 47899999998 677 68889999999999999886553 47888899999877653 4444 8899999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSD 154 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~ 154 (790)
++ +|. +.++++|++|+|++|++++ +|. +.++++|+.|+|++|++++..+ +.. ++|+.|+|++|++++..+ +
T Consensus 120 ~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l 191 (308)
T 1h6u_A 120 TD-VTP-LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--L 191 (308)
T ss_dssp CC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--G
T ss_pred CC-chh-hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--h
Confidence 85 554 8899999999999999985 443 8899999999999999986544 444 889999999999987544 7
Q ss_pred CCCCcceeeecCCCCCC
Q 040908 155 CQNGAVNLFASSSKGSN 171 (790)
Q Consensus 155 ~~~~~l~~~~~~~~~~~ 171 (790)
..++.|+.++.+.+.-.
T Consensus 192 ~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 192 ASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp GGCTTCCEEECTTSCCC
T ss_pred cCCCCCCEEEccCCccC
Confidence 78888888888776443
No 327
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.60 E-value=4.4e-15 Score=176.48 Aligned_cols=168 Identities=15% Similarity=0.141 Sum_probs=132.0
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc-------ccccceeccccCCCCCCCccccc-CcccEEEecc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS-------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRS 72 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~-------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~ 72 (790)
++|+|++|+|++..|..|..+++|+.|++++|.+.+.+| .+|+.|++++|.+.......+.. ++|+.|+|++
T Consensus 384 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~ 463 (680)
T 1ziw_A 384 HILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRR 463 (680)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTT
T ss_pred ceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcc
Confidence 468888899988888889999999999999999876544 37888888888877666666665 7888888888
Q ss_pred cccc--ccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCc--------cccC-CCCcEEec
Q 040908 73 CNLT--GELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQ--------WMFG-RGPENIDL 141 (790)
Q Consensus 73 N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~--------~~~~-~~L~~l~l 141 (790)
|.++ +.+|..|+++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..+. .+.. ++|+.|+|
T Consensus 464 n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L 543 (680)
T 1ziw_A 464 VALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNL 543 (680)
T ss_dssp SCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEEC
T ss_pred ccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEEC
Confidence 8886 56788888888888888888888876677788888888888888888764221 2344 77888888
Q ss_pred cCCccccCCCCCCCCCCcceeeecCCC
Q 040908 142 SYNNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 142 s~N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
++|+|+...+..+..+.+|+.++.+.+
T Consensus 544 ~~N~l~~i~~~~~~~l~~L~~L~Ls~N 570 (680)
T 1ziw_A 544 ESNGFDEIPVEVFKDLFELKIIDLGLN 570 (680)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCCCCCCCHHHcccccCcceeECCCC
Confidence 888888555556788888888887655
No 328
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.60 E-value=2.2e-15 Score=183.43 Aligned_cols=168 Identities=13% Similarity=0.015 Sum_probs=140.3
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccc-c------ccccceeccccCCCCCCCccccc-CcccEEEecc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYF-S------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRS 72 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~-~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~ 72 (790)
++|||++|+|++..|..|.+|++|++|+|++|.+.+.+ | .+|+.|+|++|.+....+..+.. ++|++|+|++
T Consensus 27 ~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 106 (844)
T 3j0a_A 27 ERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYF 106 (844)
T ss_dssp CEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTT
T ss_pred CEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcC
Confidence 47999999999888889999999999999999655443 3 37888899999988777777766 8899999999
Q ss_pred ccccccCCcc--ccCCCCCCEEEccCCcCCcCcc-hhccCCCCCcEEEeeCCcccccCCccccC---CCCcEEeccCCcc
Q 040908 73 CNLTGELPHF--LGEVSEMKVLDLSFNKLNGTIP-ESFARLADVDFIYLTGNLLTGKVPQWMFG---RGPENIDLSYNNF 146 (790)
Q Consensus 73 N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~g~ip-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~---~~L~~l~ls~N~l 146 (790)
|.+++.+|.. |++|++|++|+|++|++++..| ..|++|++|+.|+|++|++++..|..+.. ++|+.|+|++|.+
T Consensus 107 n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l 186 (844)
T 3j0a_A 107 CGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSL 186 (844)
T ss_dssp CCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBS
T ss_pred CCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCcc
Confidence 9999877765 8999999999999999987655 57899999999999999999888877654 6899999999999
Q ss_pred ccCCCCCCCCCCc------ceeeecCCC
Q 040908 147 ADESSGSDCQNGA------VNLFASSSK 168 (790)
Q Consensus 147 ~g~~p~~~~~~~~------l~~~~~~~~ 168 (790)
++..|..+..+.. |+.++.+.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~L~~L~Ls~n 214 (844)
T 3j0a_A 187 YSRVSVDWGKCMNPFRNMVLEILDVSGN 214 (844)
T ss_dssp CCCCCCCCCSSSCTTTTCCBSEEBCSSC
T ss_pred ccccccchhhcCCccccCceeEEecCCC
Confidence 9888877766554 778877655
No 329
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.59 E-value=5e-15 Score=163.74 Aligned_cols=165 Identities=16% Similarity=0.108 Sum_probs=132.3
Q ss_pred CEEEccCCcCcccCChh-hhcccccCcccccCcccccccc------ccccceeccccCCCCCCCccccc-CcccEEEecc
Q 040908 1 MYRTVQSNRLSGELPEE-LGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRS 72 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~-~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~ 72 (790)
++|++++|.++ .+|.. |..+++|+.|++++|.+....+ .+|+.|++++|.+...++..+.. ++|++|+|++
T Consensus 48 ~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 126 (390)
T 3o6n_A 48 KIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 126 (390)
T ss_dssp SEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred eEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCC
Confidence 47999999998 66665 7899999999999999997765 37999999999999887777666 8999999999
Q ss_pred ccccccCCc-cccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC------------------
Q 040908 73 CNLTGELPH-FLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG------------------ 133 (790)
Q Consensus 73 N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~------------------ 133 (790)
|+|+ .+|. .|+++++|++|+|++|++++..|..|.++++|+.|+|++|++++.....+..
T Consensus 127 n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 205 (390)
T 3o6n_A 127 NDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPI 205 (390)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCS
T ss_pred CccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCC
Confidence 9999 5555 4699999999999999999888888999999999999999998642221110
Q ss_pred --------------------CCCcEEeccCCccccCCCCCCCCCCcceeeecCCCC
Q 040908 134 --------------------RGPENIDLSYNNFADESSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 134 --------------------~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~~ 169 (790)
.+|+.|+|++|++++. ..+..++.|+.++.+.+.
T Consensus 206 ~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~ 259 (390)
T 3o6n_A 206 AVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNE 259 (390)
T ss_dssp SCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSC
T ss_pred cceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCc
Confidence 1455566666666543 456677788888887664
No 330
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.59 E-value=3.7e-15 Score=172.40 Aligned_cols=164 Identities=15% Similarity=0.088 Sum_probs=114.1
Q ss_pred CEEEccCCcCcccCChhh-hcccccCcccccCcccccccc---------ccccceeccccCCCCCCC--ccccc-CcccE
Q 040908 1 MYRTVQSNRLSGELPEEL-GSLIHSGKWFGWANSVWHYFS---------ESLTDLRISDLNGPEATL--PDLRN-RTFKN 67 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~-~~L~~L~~L~l~~N~l~~~~~---------~~L~~L~l~~n~~~~~~~--~~~~~-~~L~~ 67 (790)
++|+|++|+++ .+|..+ ..+++|+.|++++|++++..| .+|+.|++++|.+...+. ..+.. ++|++
T Consensus 313 ~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~ 391 (549)
T 2z81_A 313 KRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTS 391 (549)
T ss_dssp CEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCE
T ss_pred eEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCE
Confidence 36788888887 788876 468888888888888876432 368888888888776542 22333 78888
Q ss_pred EEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhc------------------cCCCCCcEEEeeCCcccccCCc
Q 040908 68 LILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESF------------------ARLADVDFIYLTGNLLTGKVPQ 129 (790)
Q Consensus 68 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~------------------~~l~~L~~L~ls~N~l~g~~p~ 129 (790)
|+|++|+|+ .+|..++.+++|++|+|++|+|+ .+|..+ .++++|+.|+|++|+|+ .+|.
T Consensus 392 L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~ 468 (549)
T 2z81_A 392 LDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPD 468 (549)
T ss_dssp EECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCC
T ss_pred EECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCC
Confidence 888888888 78888888888888888888876 444433 25666666666666666 4554
Q ss_pred cccCCCCcEEeccCCccccCCCCCCCCCCcceeeecCCC
Q 040908 130 WMFGRGPENIDLSYNNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 130 ~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
....++|+.|||++|+|++.+|..+..+.+|+.++.+.+
T Consensus 469 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 507 (549)
T 2z81_A 469 ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTN 507 (549)
T ss_dssp GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSS
T ss_pred cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCC
Confidence 333366666666666666666666666666666665544
No 331
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.58 E-value=1.4e-15 Score=174.91 Aligned_cols=165 Identities=16% Similarity=0.133 Sum_probs=134.8
Q ss_pred CEEEccCCcCcccCChhh-----hcccccCcccccCcccccccc----------ccccceeccccCCCCCCCcccccCcc
Q 040908 1 MYRTVQSNRLSGELPEEL-----GSLIHSGKWFGWANSVWHYFS----------ESLTDLRISDLNGPEATLPDLRNRTF 65 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~-----~~L~~L~~L~l~~N~l~~~~~----------~~L~~L~l~~n~~~~~~~~~~~~~~L 65 (790)
++|+|++|+|+|.+|..+ +++++|+.|++++|.+ ..| .+|+.|++++|.+.....+ ...++|
T Consensus 250 ~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~l~~L 326 (520)
T 2z7x_B 250 WYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCP-SKISPF 326 (520)
T ss_dssp SEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCC-SSCCCC
T ss_pred cEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccch-hhCCcc
Confidence 478999999999999988 8999999999999998 334 3588999998887655432 123789
Q ss_pred cEEEeccccccccCCccccCCCCCCEEEccCCcCCc--CcchhccCCCCCcEEEeeCCcccccCCcc-ccC-CCCcEEec
Q 040908 66 KNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNG--TIPESFARLADVDFIYLTGNLLTGKVPQW-MFG-RGPENIDL 141 (790)
Q Consensus 66 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g--~ip~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~-~~L~~l~l 141 (790)
++|+|++|++++.+|..++++++|++|+|++|++++ .+|..+.++++|+.|+|++|++++.+|.. +.. ++|+.|+|
T Consensus 327 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L 406 (520)
T 2z7x_B 327 LHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNM 406 (520)
T ss_dssp CEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEEC
T ss_pred cEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEEC
Confidence 999999999998889999999999999999999986 66788999999999999999999866654 444 78999999
Q ss_pred cCCccccCCCCCCCCCCcceeeecCCCCC
Q 040908 142 SYNNFADESSGSDCQNGAVNLFASSSKGS 170 (790)
Q Consensus 142 s~N~l~g~~p~~~~~~~~l~~~~~~~~~~ 170 (790)
++|++++.+|..++ ..|+.++.+.+.-
T Consensus 407 s~N~l~~~~~~~l~--~~L~~L~Ls~N~l 433 (520)
T 2z7x_B 407 SSNILTDTIFRCLP--PRIKVLDLHSNKI 433 (520)
T ss_dssp CSSCCCGGGGGSCC--TTCCEEECCSSCC
T ss_pred cCCCCCcchhhhhc--ccCCEEECCCCcc
Confidence 99999888777665 6778888776643
No 332
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=5.2e-15 Score=146.95 Aligned_cols=126 Identities=14% Similarity=0.174 Sum_probs=96.6
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCccccccccccccceeccccCCCCCCCcccccCcccEEEeccccccccCCc
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELPH 81 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~ 81 (790)
.+++++|+|+ .+|..+. .+|+.|+|++|.++.. |..+..+ ++|+.|+|++|+|++..|.
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~i-p~~~~~l-----------------~~L~~L~Ls~N~i~~i~~~ 72 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLV-PKELSNY-----------------KHLTLIDLSNNRISTLSNQ 72 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSC-CGGGGGC-----------------TTCCEEECCSSCCCCCCTT
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchh-HHHhhcc-----------------cCCCEEECCCCcCCEeCHh
Confidence 5778888887 7776543 4566666666666532 2333332 6789999999999977777
Q ss_pred cccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCcccc
Q 040908 82 FLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFAD 148 (790)
Q Consensus 82 ~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g 148 (790)
.|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+.. ++|+.|+|++|++..
T Consensus 73 ~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 73 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp TTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred HccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 8899999999999999998777778999999999999999998766666655 789999999998863
No 333
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.58 E-value=5.2e-15 Score=144.63 Aligned_cols=129 Identities=16% Similarity=0.121 Sum_probs=99.7
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCccccccccccccceeccccCCCCCCCcccccCcccEEEeccccccccCCc
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELPH 81 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~ 81 (790)
.+++++|+++ .+|..+. ++|+.|++++|++++.++..+..+ ++|++|+|++|+|++..+.
T Consensus 11 ~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l-----------------~~L~~L~l~~n~l~~~~~~ 70 (177)
T 2o6r_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKL-----------------TQLTKLSLSQNQIQSLPDG 70 (177)
T ss_dssp EEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTC-----------------TTCSEEECCSSCCCCCCTT
T ss_pred EEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCc-----------------ccccEEECCCCcceEeChh
Confidence 5777888887 6775443 566667777666665444433333 6899999999999966666
Q ss_pred cccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCC
Q 040908 82 FLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADES 150 (790)
Q Consensus 82 ~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~ 150 (790)
.|+++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..+..+.. ++|+.|+|++|++++..
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 7899999999999999999766667899999999999999999766655555 88999999999988643
No 334
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.58 E-value=2e-15 Score=174.68 Aligned_cols=164 Identities=12% Similarity=0.066 Sum_probs=130.9
Q ss_pred EEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 3 RTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 3 L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
.|+++|+++ .+|..+. ++|+.|+|++|++++..|. +|+.|++++|.+...+...+.. ++|++|+|++|+|
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 467778887 7777654 6788888888888766553 6777788888777766666655 8899999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCc-CcchhccCCCCCcEEEeeCCcccccCC-ccccC-CCCcEEeccCCccccCCCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNG-TIPESFARLADVDFIYLTGNLLTGKVP-QWMFG-RGPENIDLSYNNFADESSG 152 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~-~~L~~l~ls~N~l~g~~p~ 152 (790)
++..|..|+++++|++|+|++|++++ .+|..|+++++|+.|+|++|++.+.+| ..+.. ++|+.|+|++|++++.+|.
T Consensus 87 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 87 SSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp CSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred CccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 97777779999999999999999986 467788999999999999998655565 45555 7899999999999998899
Q ss_pred CCCCCCcceeeecCCCC
Q 040908 153 SDCQNGAVNLFASSSKG 169 (790)
Q Consensus 153 ~~~~~~~l~~~~~~~~~ 169 (790)
.+..+..|+.++.+.+.
T Consensus 167 ~l~~l~~L~~L~l~~n~ 183 (549)
T 2z81_A 167 SLKSIRDIHHLTLHLSE 183 (549)
T ss_dssp TTTTCSEEEEEEEECSB
T ss_pred hhhccccCceEecccCc
Confidence 99888888888876543
No 335
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.58 E-value=1.5e-14 Score=147.80 Aligned_cols=126 Identities=15% Similarity=0.050 Sum_probs=106.1
Q ss_pred ccceeccccCCCCCCCcccccCcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCC
Q 040908 42 LTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGN 121 (790)
Q Consensus 42 L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N 121 (790)
.+.++++++.+...+... .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 21 ~~~v~c~~~~l~~ip~~~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TTEEECTTSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEeEccCCCcCccCCCC--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 445666666555554322 278999999999999888999999999999999999998555567899999999999999
Q ss_pred cccccCCccccC-CCCcEEeccCCccccCCCCCCCCCCcceeeecCCCCC
Q 040908 122 LLTGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQNGAVNLFASSSKGS 170 (790)
Q Consensus 122 ~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~~~ 170 (790)
+|++..+..+.. ++|+.|+|++|+|+ .+|..+..+.+|+.++.+.+.-
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l 147 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQL 147 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCC
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcC
Confidence 999877777666 89999999999999 7899999999999999987643
No 336
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.58 E-value=1.1e-14 Score=155.80 Aligned_cols=156 Identities=14% Similarity=0.207 Sum_probs=108.7
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
++|+|++|+|+ .+|. +..+++|+.|+|++|.+++... .+|+.|++++|.+...+ .+.. ++|+.|+|++|++
T Consensus 66 ~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l 141 (308)
T 1h6u_A 66 IGLELKDNQIT-DLAP-LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQI 141 (308)
T ss_dssp CEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCC
T ss_pred CEEEccCCcCC-CChh-HccCCCCCEEEccCCcCCCchhhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCcc
Confidence 46788888887 4444 7778888888888887775432 36777788887776543 2443 7788888888888
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSD 154 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~ 154 (790)
++. |. ++++++|++|+|++|++++ +|. +.++++|+.|+|++|++++..+ +.. ++|+.|+|++|++++..| +
T Consensus 142 ~~~-~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l 213 (308)
T 1h6u_A 142 TNI-SP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--L 213 (308)
T ss_dssp CCC-GG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--G
T ss_pred CcC-cc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--c
Confidence 743 33 7778888888888888874 444 7788888888888888875443 333 778888888888876543 6
Q ss_pred CCCCcceeeecCCC
Q 040908 155 CQNGAVNLFASSSK 168 (790)
Q Consensus 155 ~~~~~l~~~~~~~~ 168 (790)
..+++|+.++.+.+
T Consensus 214 ~~l~~L~~L~l~~N 227 (308)
T 1h6u_A 214 ANTSNLFIVTLTNQ 227 (308)
T ss_dssp TTCTTCCEEEEEEE
T ss_pred cCCCCCCEEEccCC
Confidence 66666766665433
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.58 E-value=4.1e-15 Score=152.77 Aligned_cols=160 Identities=15% Similarity=0.012 Sum_probs=129.8
Q ss_pred CEEEccCCc-CcccCChhhhcccccCcccccC-ccccccccc------cccceeccccCCCCCCCccccc-Cccc---EE
Q 040908 1 MYRTVQSNR-LSGELPEELGSLIHSGKWFGWA-NSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFK---NL 68 (790)
Q Consensus 1 ~~L~Ls~N~-l~g~iP~~~~~L~~L~~L~l~~-N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~---~L 68 (790)
++|+|++|+ +++..+..|.++++|+.|++++ |+++...+. +|+.|++++|.+...+. +.. ++|+ .|
T Consensus 58 ~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~lp~--~~~l~~L~~L~~L 135 (239)
T 2xwt_C 58 SRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPD--LTKVYSTDIFFIL 135 (239)
T ss_dssp CEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCSCCC--CTTCCBCCSEEEE
T ss_pred cEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCccccc--cccccccccccEE
Confidence 579999997 8855555899999999999999 999877653 78999999999887553 444 6777 99
Q ss_pred Eeccc-cccccCCccccCCCCCC-EEEccCCcCCcCcchhccCCCCCcEEEeeCCc-ccccCCccccC--CCCcEEeccC
Q 040908 69 ILRSC-NLTGELPHFLGEVSEMK-VLDLSFNKLNGTIPESFARLADVDFIYLTGNL-LTGKVPQWMFG--RGPENIDLSY 143 (790)
Q Consensus 69 ~L~~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~--~~L~~l~ls~ 143 (790)
+|++| ++++..+..|.++++|+ +|+|++|+++ .+|......++|+.|+|++|+ +++..+..+.. ++|+.|+|++
T Consensus 136 ~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~ 214 (239)
T 2xwt_C 136 EITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQ 214 (239)
T ss_dssp EEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTT
T ss_pred ECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCC
Confidence 99999 99976677899999999 9999999999 777765555899999999995 99766666654 5899999999
Q ss_pred CccccCCCCCCCCCCcceeeecC
Q 040908 144 NNFADESSGSDCQNGAVNLFASS 166 (790)
Q Consensus 144 N~l~g~~p~~~~~~~~l~~~~~~ 166 (790)
|+|++..+. .+..|+.+..+
T Consensus 215 N~l~~l~~~---~~~~L~~L~l~ 234 (239)
T 2xwt_C 215 TSVTALPSK---GLEHLKELIAR 234 (239)
T ss_dssp CCCCCCCCT---TCTTCSEEECT
T ss_pred CccccCChh---HhccCceeecc
Confidence 999965444 34455555543
No 338
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.57 E-value=5.7e-15 Score=161.67 Aligned_cols=147 Identities=16% Similarity=0.022 Sum_probs=126.7
Q ss_pred cCcccccCccccccc---cccccceeccccCCCCCCCcccc-c-CcccEEEeccccccccCCccccCCCCCCEEEccCCc
Q 040908 24 SGKWFGWANSVWHYF---SESLTDLRISDLNGPEATLPDLR-N-RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNK 98 (790)
Q Consensus 24 L~~L~l~~N~l~~~~---~~~L~~L~l~~n~~~~~~~~~~~-~-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 98 (790)
-+.+++++|.++..+ |..++.|+|++|.+...+...+. . ++|+.|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 20 ~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 99 (361)
T 2xot_A 20 SNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNH 99 (361)
T ss_dssp TTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCc
Confidence 468999999998654 45899999999999988877774 4 899999999999998778889999999999999999
Q ss_pred CCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCC---CCCCcceeeecCCCCC
Q 040908 99 LNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSD---CQNGAVNLFASSSKGS 170 (790)
Q Consensus 99 l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~---~~~~~l~~~~~~~~~~ 170 (790)
|++..+..|.++++|+.|+|++|++++..|..+.. .+|+.|+|++|+|++..+..+ ..+..|..++.+.+.-
T Consensus 100 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 100 LHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred CCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 99777778999999999999999999888888877 899999999999997555545 5688899998876643
No 339
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.57 E-value=3.3e-15 Score=160.47 Aligned_cols=163 Identities=17% Similarity=0.074 Sum_probs=132.2
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----------------------ccccceeccccCCCCCCCc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----------------------ESLTDLRISDLNGPEATLP 58 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----------------------~~L~~L~l~~n~~~~~~~~ 58 (790)
++|+|++|+|++..| |..+++|++|++++|.+++..+ .+|+.|++++|.+......
T Consensus 61 ~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~~~~~ 138 (317)
T 3o53_A 61 ELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDL 138 (317)
T ss_dssp CEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCSGGGB
T ss_pred CEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCCccch
Confidence 578999999986555 8888888888888888875432 2466777777777766555
Q ss_pred cccc-CcccEEEeccccccccCCccc-cCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CC
Q 040908 59 DLRN-RTFKNLILRSCNLTGELPHFL-GEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RG 135 (790)
Q Consensus 59 ~~~~-~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~ 135 (790)
.+.. ++|++|+|++|+|++..|..+ ..+++|++|+|++|+|++ +|. ...+++|+.|+|++|++++..+. +.. ++
T Consensus 139 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~-~~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~ 215 (317)
T 3o53_A 139 DEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG-QVVFAKLKTLDLSSNKLAFMGPE-FQSAAG 215 (317)
T ss_dssp CTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EEC-CCCCTTCCEEECCSSCCCEECGG-GGGGTT
T ss_pred hhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccc-ccccccCCEEECCCCcCCcchhh-hcccCc
Confidence 5554 899999999999998888877 479999999999999984 453 44699999999999999976555 555 99
Q ss_pred CcEEeccCCccccCCCCCCCCCCcceeeecCCCC
Q 040908 136 PENIDLSYNNFADESSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 136 L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~~ 169 (790)
|+.|+|++|+|++ +|..+..+++|+.++.+.+.
T Consensus 216 L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~ 248 (317)
T 3o53_A 216 VTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNG 248 (317)
T ss_dssp CSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCC
T ss_pred ccEEECcCCcccc-hhhHhhcCCCCCEEEccCCC
Confidence 9999999999995 68888899999999887653
No 340
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.57 E-value=1.1e-14 Score=168.04 Aligned_cols=149 Identities=20% Similarity=0.158 Sum_probs=116.2
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccc--cccccceeccccCCCCCCCcccccCcccEEEecccccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYF--SESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGE 78 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~ 78 (790)
++|+|++|+|++ +|..+. ++|+.|+|++|+|+.++ +.+|+.|++++|.+...+. +. .+|+.|+|++|+|++
T Consensus 62 ~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~ip~~l~~L~~L~Ls~N~l~~ip~--l~-~~L~~L~Ls~N~l~~- 134 (571)
T 3cvr_A 62 SELQLNRLNLSS-LPDNLP--PQITVLEITQNALISLPELPASLEYLDACDNRLSTLPE--LP-ASLKHLDVDNNQLTM- 134 (571)
T ss_dssp SEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCC--CC-TTCCEEECCSSCCSC-
T ss_pred cEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcccccccCCCCEEEccCCCCCCcch--hh-cCCCEEECCCCcCCC-
Confidence 468999999985 887664 78999999999988544 3578888999998887544 33 389999999999985
Q ss_pred CCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccCCCCcEEeccCCccccCCCCCCCCCC
Q 040908 79 LPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFGRGPENIDLSYNNFADESSGSDCQNG 158 (790)
Q Consensus 79 ~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~ 158 (790)
+|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. +. .+|+.|+|++|+|+ .+|. ++.
T Consensus 135 lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~-~~L~~L~Ls~N~L~-~lp~-~~~-- 200 (571)
T 3cvr_A 135 LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP-ESLEALDVSTNLLE-SLPA-VPV-- 200 (571)
T ss_dssp CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC-TTCCEEECCSSCCS-SCCC-CC---
T ss_pred CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh-CCCCEEECcCCCCC-chhh-HHH--
Confidence 777 68899999999999985 776 67889999999999987 666 44 88999999999998 5666 554
Q ss_pred cc-------eeeecCCCCC
Q 040908 159 AV-------NLFASSSKGS 170 (790)
Q Consensus 159 ~l-------~~~~~~~~~~ 170 (790)
.| ..++.+.+..
T Consensus 201 ~L~~~~~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 201 RNHHSEETEIFFRCRENRI 219 (571)
T ss_dssp -------CCEEEECCSSCC
T ss_pred hhhcccccceEEecCCCcc
Confidence 66 7787776543
No 341
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.57 E-value=1.2e-14 Score=154.19 Aligned_cols=156 Identities=19% Similarity=0.231 Sum_probs=119.1
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
++|++++|.|+ .+|. +..+++|+.|+|++|++++..+ .+|+.|++++|.+...+ .+.. ++|+.|+|++|+|
T Consensus 49 ~~L~l~~~~i~-~~~~-~~~l~~L~~L~L~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~L~~n~i 124 (291)
T 1h6t_A 49 DQIIANNSDIK-SVQG-IQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLS--SLKDLKKLKSLSLEHNGI 124 (291)
T ss_dssp CEEECTTSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCGG--GGTTCTTCCEEECTTSCC
T ss_pred cEEEccCCCcc-cChh-HhcCCCCCEEEccCCccCCCcccccCCCCCEEECCCCcCCCCh--hhccCCCCCEEECCCCcC
Confidence 46888999888 5554 8888899999999998887654 47888888888876632 3444 7888888888888
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSD 154 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~ 154 (790)
++ + +.+.++++|++|+|++|++++. ..+..+++|+.|+|++|++++..| +.. ++|+.|+|++|+|++. | .+
T Consensus 125 ~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l 196 (291)
T 1h6t_A 125 SD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-AL 196 (291)
T ss_dssp CC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GG
T ss_pred CC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hh
Confidence 85 3 4688888888888888888854 578888888888888888887655 444 7888888888888763 3 36
Q ss_pred CCCCcceeeecCCC
Q 040908 155 CQNGAVNLFASSSK 168 (790)
Q Consensus 155 ~~~~~l~~~~~~~~ 168 (790)
..+++|+.++.+.+
T Consensus 197 ~~l~~L~~L~l~~n 210 (291)
T 1h6t_A 197 AGLKNLDVLELFSQ 210 (291)
T ss_dssp TTCTTCSEEEEEEE
T ss_pred ccCCCCCEEECcCC
Confidence 77777777766543
No 342
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.56 E-value=1.1e-15 Score=176.86 Aligned_cols=160 Identities=18% Similarity=0.148 Sum_probs=82.7
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCcc-------------ccccccc------ccccee-ccccCCCCCC-----
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANS-------------VWHYFSE------SLTDLR-ISDLNGPEAT----- 56 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~-------------l~~~~~~------~L~~L~-l~~n~~~~~~----- 56 (790)
.|+|++|+|+ .+|.+|++|++|+.|++++|. +.+.+|. +|+.|+ ++.|.+....
T Consensus 353 ~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l~l~ 431 (567)
T 1dce_A 353 RCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLL 431 (567)
T ss_dssp SCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred eccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhhhhhh
Confidence 5788888887 888888888888888887664 2333322 222222 1111110000
Q ss_pred ---CcccccCcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC
Q 040908 57 ---LPDLRNRTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG 133 (790)
Q Consensus 57 ---~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~ 133 (790)
...+....|+.|+|++|+|++ +|. |++|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .+..
T Consensus 432 ~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~ 506 (567)
T 1dce_A 432 ENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVAN 506 (567)
T ss_dssp HHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTT
T ss_pred cccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCC
Confidence 000111235555555555552 444 555555555555555555 455555555555555555555554 34 2333
Q ss_pred -CCCcEEeccCCccccCC-CCCCCCCCcceeeecCC
Q 040908 134 -RGPENIDLSYNNFADES-SGSDCQNGAVNLFASSS 167 (790)
Q Consensus 134 -~~L~~l~ls~N~l~g~~-p~~~~~~~~l~~~~~~~ 167 (790)
++|+.|+|++|+|++.+ |..+..+++|..++.+.
T Consensus 507 l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~ 542 (567)
T 1dce_A 507 LPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQG 542 (567)
T ss_dssp CSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTT
T ss_pred CCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecC
Confidence 45555555555555544 55555555555555543
No 343
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.56 E-value=2.5e-15 Score=142.45 Aligned_cols=122 Identities=16% Similarity=0.107 Sum_probs=62.7
Q ss_pred EEEccCCcCc-ccCChhhhcccccCcccccCccccccccccccceeccccCCCCCCCcccccCcccEEEeccccccccCC
Q 040908 2 YRTVQSNRLS-GELPEELGSLIHSGKWFGWANSVWHYFSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELP 80 (790)
Q Consensus 2 ~L~Ls~N~l~-g~iP~~~~~L~~L~~L~l~~N~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p 80 (790)
+|+|++|+|+ +.+|..+..+++|+.|++++|.+++. ..+..+ ++|++|+|++|+|++.+|
T Consensus 21 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l-----------------~~L~~L~Ls~n~i~~~~~ 81 (149)
T 2je0_A 21 ELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKL-----------------NKLKKLELSDNRVSGGLE 81 (149)
T ss_dssp EEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCC-----------------TTCCEEECCSSCCCSCTH
T ss_pred EEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcC-----------------CCCCEEECCCCcccchHH
Confidence 4555555555 45555555555555555555544432 111111 355556666666555455
Q ss_pred ccccCCCCCCEEEccCCcCCcC-cchhccCCCCCcEEEeeCCcccccCC---ccccC-CCCcEEecc
Q 040908 81 HFLGEVSEMKVLDLSFNKLNGT-IPESFARLADVDFIYLTGNLLTGKVP---QWMFG-RGPENIDLS 142 (790)
Q Consensus 81 ~~~~~l~~L~~L~Ls~N~l~g~-ip~~~~~l~~L~~L~ls~N~l~g~~p---~~~~~-~~L~~l~ls 142 (790)
..++++++|++|+|++|++++. .|..+.++++|+.|+|++|.+++..+ ..+.. ++|+.||++
T Consensus 82 ~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 82 VLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp HHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred HHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 5555555566666666665531 23555555556666666665554443 23333 555555554
No 344
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.55 E-value=1.2e-14 Score=170.75 Aligned_cols=128 Identities=16% Similarity=0.170 Sum_probs=104.6
Q ss_pred cccceeccccCCCCCCCccccc-CcccEEEeccccc-cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEe
Q 040908 41 SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL-TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYL 118 (790)
Q Consensus 41 ~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~l 118 (790)
++..++++.|.+.......+.. +.|+.|+|++|++ .+.+|..|..+++|++|+|++|+|++..|..|.+|++|+.|+|
T Consensus 446 ~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~L 525 (635)
T 4g8a_A 446 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 525 (635)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEEC
Confidence 5566667777776666555555 7889999998874 4457888899999999999999999888888999999999999
Q ss_pred eCCcccccCCccccC-CCCcEEeccCCccccCCCCCCCCC-CcceeeecCCC
Q 040908 119 TGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQN-GAVNLFASSSK 168 (790)
Q Consensus 119 s~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~-~~l~~~~~~~~ 168 (790)
++|+|++..|..+.. ++|+.|||++|+|++..|..+..+ .+|+.++.+.+
T Consensus 526 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~N 577 (635)
T 4g8a_A 526 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 577 (635)
T ss_dssp TTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTC
T ss_pred CCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCC
Confidence 999999888877776 889999999999999888888877 57888877654
No 345
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.55 E-value=8.7e-15 Score=169.97 Aligned_cols=163 Identities=12% Similarity=0.031 Sum_probs=125.5
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccc------cccceeccccCCCCCCC--ccccc-CcccEEEec
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE------SLTDLRISDLNGPEATL--PDLRN-RTFKNLILR 71 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~--~~~~~-~~L~~L~L~ 71 (790)
++|++++|++. .++- ...+++|+.|++++|.+++..|. +|+.|++++|.+...+. ..+.. ++|+.|+|+
T Consensus 334 ~~L~l~~n~~~-~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~ 411 (562)
T 3a79_B 334 KMLSISDTPFI-HMVC-PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVS 411 (562)
T ss_dssp SEEEEESSCCC-CCCC-CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECT
T ss_pred eEEEccCCCcc-cccC-ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECC
Confidence 46888888886 3321 26778888899999988875543 78888888888876542 22333 789999999
Q ss_pred cccccccCCcc-ccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccC
Q 040908 72 SCNLTGELPHF-LGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADE 149 (790)
Q Consensus 72 ~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~ 149 (790)
+|++++.+|.. +..+++|++|+|++|+|++.+|..+. ++|+.|+|++|+++ .+|..+.. ++|+.|+|++|+|++
T Consensus 412 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~- 487 (562)
T 3a79_B 412 LNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS- 487 (562)
T ss_dssp TSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-
T ss_pred CCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-
Confidence 99999767764 78899999999999999888887655 78999999999998 56655555 889999999999985
Q ss_pred CCCC-CCCCCcceeeecCCCC
Q 040908 150 SSGS-DCQNGAVNLFASSSKG 169 (790)
Q Consensus 150 ~p~~-~~~~~~l~~~~~~~~~ 169 (790)
+|.. +..++.|+.++.+.+.
T Consensus 488 l~~~~~~~l~~L~~L~l~~N~ 508 (562)
T 3a79_B 488 VPDGVFDRLTSLQYIWLHDNP 508 (562)
T ss_dssp CCTTSTTTCTTCCCEECCSCC
T ss_pred CCHHHHhcCCCCCEEEecCCC
Confidence 5554 8888888888876653
No 346
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.55 E-value=8e-16 Score=183.52 Aligned_cols=142 Identities=18% Similarity=0.093 Sum_probs=111.7
Q ss_pred cCChhhhcccccCcccccCcccccccc-----ccccceeccccCCCCCCCccccc-CcccEEEeccccccccCCccccCC
Q 040908 13 ELPEELGSLIHSGKWFGWANSVWHYFS-----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNLTGELPHFLGEV 86 (790)
Q Consensus 13 ~iP~~~~~L~~L~~L~l~~N~l~~~~~-----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l~~~~p~~~~~l 86 (790)
..|..|..+.+|+.|+|++|.+..+++ .+|+.|+|++|.+...+ ..+.. ++|+.|+|++|+|+ .+|..|++|
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~~lp-~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 292 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLTELP-AEIKNLSNLRVLDLSHNRLT-SLPAELGSC 292 (727)
T ss_dssp -------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCSCCC-GGGGGGTTCCEEECTTSCCS-SCCSSGGGG
T ss_pred cChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCcccC-hhhhCCCCCCEEeCcCCcCC-ccChhhcCC
Confidence 457778889999999999999885543 37888999999888554 33444 89999999999999 889999999
Q ss_pred CCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC--CCCcEEeccCCccccCCCCCCCCC
Q 040908 87 SEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG--RGPENIDLSYNNFADESSGSDCQN 157 (790)
Q Consensus 87 ~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~--~~L~~l~ls~N~l~g~~p~~~~~~ 157 (790)
++|++|+|++|+|+ .+|..|++|++|+.|+|++|.|++.+|..+.. ..+..|+|++|.++|.+|..+..+
T Consensus 293 ~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l 364 (727)
T 4b8c_D 293 FQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFI 364 (727)
T ss_dssp TTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----
T ss_pred CCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccccee
Confidence 99999999999997 88999999999999999999999999987765 233457899999999998876543
No 347
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.55 E-value=2.5e-14 Score=174.19 Aligned_cols=169 Identities=17% Similarity=0.158 Sum_probs=122.1
Q ss_pred CEEEccCCcCcccCC-hhhhcccccCcccccCcccccccc--------cc------------------------------
Q 040908 1 MYRTVQSNRLSGELP-EELGSLIHSGKWFGWANSVWHYFS--------ES------------------------------ 41 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP-~~~~~L~~L~~L~l~~N~l~~~~~--------~~------------------------------ 41 (790)
++|||++|++++..| ..|++|++|+.|+|++|.+++..+ .+
T Consensus 126 ~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~ 205 (844)
T 3j0a_A 126 TRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMV 205 (844)
T ss_dssp CEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCC
T ss_pred CEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCc
Confidence 478888888886654 468888888888888888765433 23
Q ss_pred ccceeccccCCCCCCCccc---------------------------------------ccCcccEEEeccccccccCCcc
Q 040908 42 LTDLRISDLNGPEATLPDL---------------------------------------RNRTFKNLILRSCNLTGELPHF 82 (790)
Q Consensus 42 L~~L~l~~n~~~~~~~~~~---------------------------------------~~~~L~~L~L~~N~l~~~~p~~ 82 (790)
|+.|++++|.+.......+ ..++|+.|+|++|.+.+..|..
T Consensus 206 L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~ 285 (844)
T 3j0a_A 206 LEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRV 285 (844)
T ss_dssp BSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCC
T ss_pred eeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhh
Confidence 4444444443221111000 0146788888888888777778
Q ss_pred ccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCCCCCCcce
Q 040908 83 LGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQNGAVN 161 (790)
Q Consensus 83 ~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~~~l~ 161 (790)
|+++++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..+.. ++|+.|+|++|++++..+..+..+++|+
T Consensus 286 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 365 (844)
T 3j0a_A 286 FETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQ 365 (844)
T ss_dssp SSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCC
T ss_pred hhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCC
Confidence 888888888888888888777788888888888888888888777777766 7888888888888877777788888888
Q ss_pred eeecCCCC
Q 040908 162 LFASSSKG 169 (790)
Q Consensus 162 ~~~~~~~~ 169 (790)
.++.+.+.
T Consensus 366 ~L~Ls~N~ 373 (844)
T 3j0a_A 366 TLDLRDNA 373 (844)
T ss_dssp EEEEETCC
T ss_pred EEECCCCC
Confidence 88776653
No 348
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.55 E-value=3.6e-15 Score=148.01 Aligned_cols=137 Identities=15% Similarity=0.101 Sum_probs=111.2
Q ss_pred CEEEccCCcCcccCCh-hhhcccccCcccccCccccccccccccceeccccCCCCCCCcccccCcccEEEeccccccccC
Q 040908 1 MYRTVQSNRLSGELPE-ELGSLIHSGKWFGWANSVWHYFSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGEL 79 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~-~~~~L~~L~~L~l~~N~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~ 79 (790)
++|+|++|+|++..|. .|+.+++|+.|+|++|+|++..|..+..+ ++|++|+|++|+|++..
T Consensus 32 ~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-----------------~~L~~L~Ls~N~l~~~~ 94 (192)
T 1w8a_A 32 TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGA-----------------SHIQELQLGENKIKEIS 94 (192)
T ss_dssp SEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTC-----------------TTCCEEECCSCCCCEEC
T ss_pred CEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCc-----------------ccCCEEECCCCcCCccC
Confidence 4799999999965554 49999999999999999998888777766 58999999999999888
Q ss_pred CccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccCCCCcEEeccCCccccCCCCCC
Q 040908 80 PHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFGRGPENIDLSYNNFADESSGSD 154 (790)
Q Consensus 80 p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ls~N~l~g~~p~~~ 154 (790)
|..|.++++|++|+|++|+|++.+|..|..+++|+.|+|++|.+++..+-......++...+..+......|..+
T Consensus 95 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~l 169 (192)
T 1w8a_A 95 NKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKV 169 (192)
T ss_dssp SSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTTT
T ss_pred HHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChHH
Confidence 888999999999999999999999999999999999999999999877632222223333444455444445443
No 349
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.55 E-value=1.7e-14 Score=168.07 Aligned_cols=156 Identities=19% Similarity=0.227 Sum_probs=126.1
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
++|+|++|.|+ .+| .|..|++|+.|+|++|.+.+..+ .+|+.|+|++|.+...+ .+.. ++|+.|+|++|+|
T Consensus 46 ~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~l~--~l~~l~~L~~L~Ls~N~l 121 (605)
T 1m9s_A 46 DQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIKDLS--SLKDLKKLKSLSLEHNGI 121 (605)
T ss_dssp CCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCT--TSTTCTTCCEEECTTSCC
T ss_pred CEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChhhccCCCCCEEECcCCCCCCCh--hhccCCCCCEEEecCCCC
Confidence 36889999998 666 58889999999999999887664 47888889998887644 3444 8899999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSD 154 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~ 154 (790)
++ + +.+.+|++|+.|+|++|+|++. ..|..|++|+.|+|++|+|++..| +.. ++|+.|+|++|+|++. ..+
T Consensus 122 ~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l 193 (605)
T 1m9s_A 122 SD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RAL 193 (605)
T ss_dssp CC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGG
T ss_pred CC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHH
Confidence 85 4 4588899999999999999854 578899999999999999988766 444 8899999999999874 357
Q ss_pred CCCCcceeeecCCC
Q 040908 155 CQNGAVNLFASSSK 168 (790)
Q Consensus 155 ~~~~~l~~~~~~~~ 168 (790)
..++.|..|+.+.+
T Consensus 194 ~~l~~L~~L~L~~N 207 (605)
T 1m9s_A 194 AGLKNLDVLELFSQ 207 (605)
T ss_dssp TTCTTCSEEECCSE
T ss_pred ccCCCCCEEEccCC
Confidence 78888888887654
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.54 E-value=2.7e-14 Score=164.61 Aligned_cols=128 Identities=19% Similarity=0.136 Sum_probs=78.7
Q ss_pred ccCcccccCcccccccc---ccccceeccccCCCCCCCcccccCcccEEEeccccccccCCccccCCCCCCEEEccCCcC
Q 040908 23 HSGKWFGWANSVWHYFS---ESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKL 99 (790)
Q Consensus 23 ~L~~L~l~~N~l~~~~~---~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 99 (790)
+|+.|+|++|.++++++ .+|+.|++++|.+...+ -..++|+.|+|++|+|++ +|. |++ +|++|+|++|+|
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l 132 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLPPQITVLEITQNALISLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQL 132 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCCTTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCC
T ss_pred CccEEEeCCCCCCccCHhHcCCCCEEECcCCCCcccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcC
Confidence 66667777776665332 35666667666666444 112566777777777764 665 544 667777777777
Q ss_pred CcCcchhccCCCCCcEEEeeCCcccccCCccccCCCCcEEeccCCccccCCCCCCCCCCcceeeecCCC
Q 040908 100 NGTIPESFARLADVDFIYLTGNLLTGKVPQWMFGRGPENIDLSYNNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 100 ~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
++ +|. .+++|+.|+|++|+|++ +|. ..++|+.|+|++|+|++ +|. ++ .+|+.++.+.+
T Consensus 133 ~~-lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N 190 (571)
T 3cvr_A 133 TM-LPE---LPALLEYINADNNQLTM-LPE--LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTN 190 (571)
T ss_dssp SC-CCC---CCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSS
T ss_pred CC-CCC---cCccccEEeCCCCccCc-CCC--cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCC
Confidence 64 555 56667777777777665 444 22566677777777665 454 44 56666666554
No 351
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.54 E-value=2.2e-16 Score=182.83 Aligned_cols=138 Identities=20% Similarity=0.084 Sum_probs=121.0
Q ss_pred CcccCChhhhcccccCccc-ccCc-------------cccccccccccceeccccCCCCCCCccccc-CcccEEEecccc
Q 040908 10 LSGELPEELGSLIHSGKWF-GWAN-------------SVWHYFSESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCN 74 (790)
Q Consensus 10 l~g~iP~~~~~L~~L~~L~-l~~N-------------~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~ 74 (790)
+.+.+|..++.|++|+.|+ ++.| .+....+..|+.|++++|.+...+. +.. ++|+.|+|++|+
T Consensus 397 ~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~lp~--~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 397 PLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp TGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTCSEEECTTSCCSSCCC--GGGGTTCCEEECCSSC
T ss_pred cccCCHHHHHHHHhcccCcchhhcccchhhhhhhhcccccccCccCceEEEecCCCCCCCcC--ccccccCcEeecCccc
Confidence 6778888999999988888 4544 4555566689999999999988653 554 899999999999
Q ss_pred ccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccC-CccccC-CCCcEEeccCCccccCCCC
Q 040908 75 LTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKV-PQWMFG-RGPENIDLSYNNFADESSG 152 (790)
Q Consensus 75 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~-p~~~~~-~~L~~l~ls~N~l~g~~p~ 152 (790)
|+ .+|..|++|++|+.|+|++|+|++ +| .|++|++|+.|+|++|+|++.+ |..+.. ++|+.|+|++|+|++.+|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 99 999999999999999999999995 88 8999999999999999999987 888877 8999999999999987653
No 352
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.54 E-value=2.1e-14 Score=149.85 Aligned_cols=153 Identities=16% Similarity=0.188 Sum_probs=92.8
Q ss_pred EEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCccccc-CcccEEEeccccccc
Q 040908 3 RTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNLTG 77 (790)
Q Consensus 3 L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l~~ 77 (790)
|+|++|.++ .++ .+..+++|+.|++++|.++.... .+|+.|++++|.+...+. +.. ++|+.|+|++|+|++
T Consensus 24 l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~ 99 (263)
T 1xeu_A 24 QNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN 99 (263)
T ss_dssp HHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC
T ss_pred HHhcCCCcc-ccc-chhhcCcCcEEECcCCCcccchHHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC
Confidence 355666666 344 46666666667776666654331 256666666666665443 333 667777777777763
Q ss_pred cCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCCCC
Q 040908 78 ELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQ 156 (790)
Q Consensus 78 ~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~ 156 (790)
+|... . ++|++|+|++|+|++ +| .+.++++|+.|+|++|++++. | .+.. ++|+.|+|++|+|++. ..+..
T Consensus 100 -l~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~ 170 (263)
T 1xeu_A 100 -LNGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTR 170 (263)
T ss_dssp -CTTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTT
T ss_pred -cCccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhcc
Confidence 44322 2 667777777777763 33 466777777777777777653 3 2333 6677777777777665 45666
Q ss_pred CCcceeeecCCC
Q 040908 157 NGAVNLFASSSK 168 (790)
Q Consensus 157 ~~~l~~~~~~~~ 168 (790)
++.|+.++.+.+
T Consensus 171 l~~L~~L~l~~N 182 (263)
T 1xeu_A 171 LKKVNWIDLTGQ 182 (263)
T ss_dssp CCCCCEEEEEEE
T ss_pred CCCCCEEeCCCC
Confidence 666666665443
No 353
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.52 E-value=3.9e-14 Score=153.78 Aligned_cols=159 Identities=14% Similarity=0.145 Sum_probs=119.1
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
++|++++|.+++ ++. +..+++|+.|++++|.+.+..+ .+|+.|++++|.+..... +.. ++|+.|+|++|++
T Consensus 158 ~~L~l~~~~~~~-~~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l 233 (347)
T 4fmz_A 158 NYLTVTESKVKD-VTP-IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKI 233 (347)
T ss_dssp CEEECCSSCCCC-CGG-GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred cEEEecCCCcCC-chh-hccCCCCCEEEccCCcccccccccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCcc
Confidence 478888888884 443 8888888888888888876543 477778888877765543 333 7788888888888
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSD 154 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~ 154 (790)
++ +|. +..+++|++|+|++|++++ + ..+..+++|+.|+|++|++++. |. +.. ++|+.|+|++|++++..|..+
T Consensus 234 ~~-~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 234 TD-LSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SV-LNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp CC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GG-GGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred CC-Ccc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hh-hcCCCCCCEEECcCCcCCCcChhHh
Confidence 74 444 7888888888888888874 4 4678888888888888888764 43 333 778888888888888777777
Q ss_pred CCCCcceeeecCCCC
Q 040908 155 CQNGAVNLFASSSKG 169 (790)
Q Consensus 155 ~~~~~l~~~~~~~~~ 169 (790)
..++.|+.++.+.+.
T Consensus 308 ~~l~~L~~L~L~~n~ 322 (347)
T 4fmz_A 308 GGLTNLTTLFLSQNH 322 (347)
T ss_dssp HTCTTCSEEECCSSS
T ss_pred hccccCCEEEccCCc
Confidence 788888888877654
No 354
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.51 E-value=2e-14 Score=162.16 Aligned_cols=156 Identities=16% Similarity=0.180 Sum_probs=86.2
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccccc-------------------ccceeccccCCCCCCCcccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSES-------------------LTDLRISDLNGPEATLPDLR 61 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~~-------------------L~~L~l~~n~~~~~~~~~~~ 61 (790)
++|++++|+| |.+|.+|++|++|++|++++|.+.+..|.. ++.|++++|.+...+. +
T Consensus 14 ~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~--~- 89 (454)
T 1jl5_A 14 QEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE--L- 89 (454)
T ss_dssp ---------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS--C-
T ss_pred hhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC--C-
Confidence 4678888888 688888888888888888888887666642 3556666666654332 1
Q ss_pred cCcccEEEeccccccccCCccccC----------------C-CCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCccc
Q 040908 62 NRTFKNLILRSCNLTGELPHFLGE----------------V-SEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLT 124 (790)
Q Consensus 62 ~~~L~~L~L~~N~l~~~~p~~~~~----------------l-~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~ 124 (790)
.++|+.|+|++|++++ +|..+.+ + ++|++|+|++|++++ +| +|+++++|+.|++++|+++
T Consensus 90 ~~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~ 166 (454)
T 1jl5_A 90 PPHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLK 166 (454)
T ss_dssp CTTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCS
T ss_pred cCCCCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCc
Confidence 2456666666666664 4433211 1 467777777777764 66 4777777777777777777
Q ss_pred ccCCccccCCCCcEEeccCCccccCCCCCCCCCCcceeeecCCC
Q 040908 125 GKVPQWMFGRGPENIDLSYNNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 125 g~~p~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
+ +|... .+|+.|+|++|++++ +| .+..++.|+.++.+.+
T Consensus 167 ~-lp~~~--~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N 205 (454)
T 1jl5_A 167 K-LPDLP--PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNN 205 (454)
T ss_dssp C-CCCCC--TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSS
T ss_pred c-cCCCc--ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCC
Confidence 5 45432 367777777777776 45 4667777777766554
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.50 E-value=6.2e-14 Score=163.27 Aligned_cols=142 Identities=18% Similarity=0.265 Sum_probs=121.4
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
++|+|++|+|++. |. |..|++|+.|+|++|.+.+... .+|+.|+|++|.+... +.+.. ++|+.|+|++|+|
T Consensus 68 ~~L~Ls~N~l~~~-~~-l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l 143 (605)
T 1m9s_A 68 TKLFLNGNKLTDI-KP-LTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKI 143 (605)
T ss_dssp CEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCTTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred CEEEeeCCCCCCC-hh-hccCCCCCEEECcCCCCCCChhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCcc
Confidence 5799999999954 44 9999999999999999987542 4899999999998864 34544 8999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSG 152 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~ 152 (790)
++. ..|+.|++|+.|+|++|+|++..| +..|++|+.|+|++|+|++. |. +.. ++|+.|+|++|+|++....
T Consensus 144 ~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~-l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 144 TDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RA-LAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp CCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GG-GTTCTTCSEEECCSEEEECCCCC
T ss_pred CCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hH-HccCCCCCEEEccCCcCcCCccc
Confidence 965 679999999999999999997666 99999999999999999974 54 444 8999999999999875433
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.50 E-value=5.6e-14 Score=148.92 Aligned_cols=139 Identities=19% Similarity=0.300 Sum_probs=119.4
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
++|+|++|+|++ +|. +..+++|+.|++++|.+++... .+|+.|++++|.+... +.+.. ++|+.|+|++|+|
T Consensus 71 ~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l 146 (291)
T 1h6t_A 71 TKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKI 146 (291)
T ss_dssp CEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCGGGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCC
T ss_pred CEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCCChhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcC
Confidence 479999999995 554 9999999999999999987543 4899999999998875 44444 8999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADE 149 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~ 149 (790)
++. ..++.+++|++|+|++|++++..| +..+++|+.|+|++|++++ +|. +.. ++|+.|+|++|+++..
T Consensus 147 ~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~-l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 147 TDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRA-LAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGG-GTTCTTCSEEEEEEEEEECC
T ss_pred Ccc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Chh-hccCCCCCEEECcCCcccCC
Confidence 954 679999999999999999996544 9999999999999999996 454 444 8999999999999863
No 357
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.49 E-value=2e-13 Score=154.15 Aligned_cols=153 Identities=14% Similarity=0.104 Sum_probs=123.1
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc---ccccceeccccCCCCCCCccccc-CcccEEEecccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS---ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNLT 76 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~---~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l~ 76 (790)
++|+|++|+|++ +| .|+.+++|++|+|++|.+++... .+|+.|++++|.+...+ +.. ++|++|+|++|+|+
T Consensus 45 ~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~~~~~l~~L~~L~Ls~N~l~~~~---~~~l~~L~~L~L~~N~l~ 119 (457)
T 3bz5_A 45 TSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTLDLSQNTNLTYLACDSNKLTNLD---VTPLTKLTYLNCDTNKLT 119 (457)
T ss_dssp CEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECCSSCCS
T ss_pred CEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeEccccCCCCCEEECcCCCCceee---cCCCCcCCEEECCCCcCC
Confidence 479999999995 56 69999999999999999987643 47888999999888764 333 78999999999999
Q ss_pred ccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCCC
Q 040908 77 GELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSDC 155 (790)
Q Consensus 77 ~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~ 155 (790)
+ +| ++++++|++|+|++|+|++ +| ++++++|+.|++++|+..+.++ +.. ++|+.|+|++|+|++ +| +.
T Consensus 120 ~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~--~~~l~~L~~L~ls~n~l~~-l~--l~ 188 (457)
T 3bz5_A 120 K-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITE-LD--VS 188 (457)
T ss_dssp C-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCC--CTTCTTCCEEECCSSCCCC-CC--CT
T ss_pred e-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccc--cccCCcCCEEECCCCccce-ec--cc
Confidence 6 55 8899999999999999986 44 7888888999988887666663 334 788888888888887 34 66
Q ss_pred CCCcceeeecCCCC
Q 040908 156 QNGAVNLFASSSKG 169 (790)
Q Consensus 156 ~~~~l~~~~~~~~~ 169 (790)
.++.|+.+..+.+.
T Consensus 189 ~l~~L~~L~l~~N~ 202 (457)
T 3bz5_A 189 QNKLLNRLNCDTNN 202 (457)
T ss_dssp TCTTCCEEECCSSC
T ss_pred cCCCCCEEECcCCc
Confidence 77777777776553
No 358
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.49 E-value=1.2e-13 Score=156.52 Aligned_cols=158 Identities=18% Similarity=0.209 Sum_probs=127.0
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccc----cccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYF----SESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~----~~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
++|+|++|++++..| ++.+++|+.|++++|.+.+.. ..+|+.|++++|.+..... +.. ++|+.|+|++|++
T Consensus 202 ~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l 277 (466)
T 1o6v_A 202 ESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI 277 (466)
T ss_dssp SEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCC
T ss_pred CEEEecCCccccccc--ccccCCCCEEECCCCCcccchhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCcc
Confidence 478999999996555 788999999999999988642 2478899999988876543 433 8899999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSD 154 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~ 154 (790)
++..| +..+++|++|+|++|++++..| +..+++|+.|+|++|++++..| +.. ++|+.|++++|++++. ..+
T Consensus 278 ~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l 349 (466)
T 1o6v_A 278 SNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSL 349 (466)
T ss_dssp CCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGG
T ss_pred Ccccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhh
Confidence 85443 8889999999999999986444 8889999999999999998766 334 8899999999999875 467
Q ss_pred CCCCcceeeecCCCCC
Q 040908 155 CQNGAVNLFASSSKGS 170 (790)
Q Consensus 155 ~~~~~l~~~~~~~~~~ 170 (790)
..++.|+.++.+.+..
T Consensus 350 ~~l~~L~~L~l~~n~l 365 (466)
T 1o6v_A 350 ANLTNINWLSAGHNQI 365 (466)
T ss_dssp TTCTTCCEEECCSSCC
T ss_pred ccCCCCCEEeCCCCcc
Confidence 7888888888876643
No 359
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.48 E-value=1.9e-13 Score=154.22 Aligned_cols=134 Identities=17% Similarity=0.160 Sum_probs=67.5
Q ss_pred cccCcccccCcccccc--ccccccceeccccCCCCCCCccccc-CcccEEEeccccccccCCccccCCCCCCEEEccCCc
Q 040908 22 IHSGKWFGWANSVWHY--FSESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNK 98 (790)
Q Consensus 22 ~~L~~L~l~~N~l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 98 (790)
++|+.|++++|.+++. .|.+|+.|++++|.+...+ .+.. ++|++|+|++|++++ +|..+ .+|++|+|++|+
T Consensus 111 ~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~lp--~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~ 184 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLP--ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQ 184 (454)
T ss_dssp TTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSC
T ss_pred CCCcEEECCCCccCcccCCCCCCCEEECcCCCCCCCc--ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCc
Confidence 3445555555554432 2234555555555544432 2332 455555555555552 44332 355555555555
Q ss_pred CCcCcchhccCCCCCcEEEeeCCcccccCCccccCCCCcEEeccCCccccCCCCCCCCCCcceeeecCCC
Q 040908 99 LNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFGRGPENIDLSYNNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 99 l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
+++ +| .|+++++|+.|++++|++++ +|... .+|+.|++++|+++ .+| .+..++.|+.++.+.+
T Consensus 185 l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N 247 (454)
T 1jl5_A 185 LEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP--LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNN 247 (454)
T ss_dssp CSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC--TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSS
T ss_pred CCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc--CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCC
Confidence 553 44 45556666666666666554 33221 35666666666665 445 3556666666665543
No 360
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.48 E-value=6.6e-14 Score=146.10 Aligned_cols=139 Identities=16% Similarity=0.149 Sum_probs=109.5
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCcccccCcccEEEecccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLT 76 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~ 76 (790)
++|+|++|+|+ .+| .+..+++|+.|+|++|++++..+ .+|+.|++++|.+...+.... ++|+.|+|++|+|+
T Consensus 44 ~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~L~~N~l~~l~~~~~--~~L~~L~L~~N~l~ 119 (263)
T 1xeu_A 44 QNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPS--ACLSRLFLDNNELR 119 (263)
T ss_dssp SEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCSCCTTCCC--SSCCEEECCSSCCS
T ss_pred cEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChhhccCCCCCEEECCCCccCCcCcccc--CcccEEEccCCccC
Confidence 46888899888 677 68888889999999998887654 478888888888876543222 78889999999888
Q ss_pred ccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccC
Q 040908 77 GELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADE 149 (790)
Q Consensus 77 ~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~ 149 (790)
+ +| .++++++|++|+|++|+|++ +| .+..+++|+.|+|++|++++. ..+.. ++|+.|+|++|++++.
T Consensus 120 ~-~~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 120 D-TD-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp B-SG-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred C-Ch-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 5 44 58888899999999999884 45 688888899999999988876 33444 7888899999988765
No 361
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.48 E-value=4.8e-14 Score=140.31 Aligned_cols=143 Identities=12% Similarity=0.114 Sum_probs=120.6
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
++|+|++|+|+ .+| .+..+++|+.|++++|.++.... .+|+.|++++|.+....+..+.. ++|++|+|++|++
T Consensus 47 ~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i 124 (197)
T 4ezg_A 47 TYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAH 124 (197)
T ss_dssp CEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBC
T ss_pred cEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCcc
Confidence 47999999999 888 79999999999999998875432 48999999999988655555555 8999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCcccc
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFAD 148 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g 148 (790)
++..|..++++++|++|+|++|++.+.+| .+.++++|+.|+|++|++++ ++ .+.. ++|+.|++++|++.+
T Consensus 125 ~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 125 DDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp BGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 98899999999999999999999434777 79999999999999999996 44 3444 899999999999864
No 362
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.48 E-value=2.5e-15 Score=165.99 Aligned_cols=104 Identities=18% Similarity=0.203 Sum_probs=48.2
Q ss_pred CcccEEEecccccc--c---cCCccccCCCCCCEEEccCCcCC----cCcchhccCCCCCcEEEeeCCccccc----CCc
Q 040908 63 RTFKNLILRSCNLT--G---ELPHFLGEVSEMKVLDLSFNKLN----GTIPESFARLADVDFIYLTGNLLTGK----VPQ 129 (790)
Q Consensus 63 ~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----g~ip~~~~~l~~L~~L~ls~N~l~g~----~p~ 129 (790)
++|+.|+|++|+|+ | .+|..+.++++|++|+|++|+|+ +.+|..+..+++|+.|+|++|++++. +|.
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 266 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHH
Confidence 34555555555554 1 23334445555555555555553 34455555555555555555555443 233
Q ss_pred ccc---CCCCcEEeccCCcccc----CCCCCC-CCCCcceeeecC
Q 040908 130 WMF---GRGPENIDLSYNNFAD----ESSGSD-CQNGAVNLFASS 166 (790)
Q Consensus 130 ~~~---~~~L~~l~ls~N~l~g----~~p~~~-~~~~~l~~~~~~ 166 (790)
.+. .++|+.|+|++|+|++ .+|..+ ..+++|+.++.+
T Consensus 267 ~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~ 311 (386)
T 2ca6_A 267 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELN 311 (386)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECT
T ss_pred HHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEcc
Confidence 321 2445555555555554 244333 223444444443
No 363
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.48 E-value=2.6e-13 Score=153.18 Aligned_cols=152 Identities=16% Similarity=0.067 Sum_probs=93.1
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc---ccccceeccccCCCCCCCcccccCcccEEEeccccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS---ESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTG 77 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~---~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~ 77 (790)
++|+|++|+|++ +| ++.+++|++|++++|.+++... .+|+.|++++|.+...+ ....++|++|+|++|+|++
T Consensus 67 ~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~l~--~~~l~~L~~L~l~~N~l~~ 141 (457)
T 3bz5_A 67 TKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNLDVTPLTKLTYLNCDTNKLTKLD--VSQNPLLTYLNCARNTLTE 141 (457)
T ss_dssp SEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECCSSCCSCCC--CTTCTTCCEEECTTSCCSC
T ss_pred CEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCceeecCCCCcCCEEECCCCcCCeec--CCCCCcCCEEECCCCccce
Confidence 467888888874 45 7777778888888887776532 36777777777776643 1122677777777777775
Q ss_pred cCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCCCC
Q 040908 78 ELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQ 156 (790)
Q Consensus 78 ~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~ 156 (790)
+| ++++++|++|+|++|+..+.+ .+..+++|+.|+|++|++++ +| +.. ++|+.|++++|+|++. .+..
T Consensus 142 -l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~ 210 (457)
T 3bz5_A 142 -ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQ 210 (457)
T ss_dssp -CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTT
T ss_pred -ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---cccc
Confidence 33 666666666666666554455 35566666666666666665 33 222 5555555555555543 2445
Q ss_pred CCcceeeecCCC
Q 040908 157 NGAVNLFASSSK 168 (790)
Q Consensus 157 ~~~l~~~~~~~~ 168 (790)
++.|+.++.+.+
T Consensus 211 l~~L~~L~Ls~N 222 (457)
T 3bz5_A 211 NIQLTFLDCSSN 222 (457)
T ss_dssp CTTCSEEECCSS
T ss_pred CCCCCEEECcCC
Confidence 555555555443
No 364
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.47 E-value=2e-13 Score=154.61 Aligned_cols=157 Identities=18% Similarity=0.238 Sum_probs=134.4
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
++|+|++|+++ .++ .+..+++|+.|++++|.+.+..+ .+|+.|++++|.+... +.+.. ++|+.|+|++|++
T Consensus 180 ~~L~l~~n~l~-~~~-~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l 255 (466)
T 1o6v_A 180 ERLDISSNKVS-DIS-VLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQI 255 (466)
T ss_dssp CEEECCSSCCC-CCG-GGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred CEEECcCCcCC-CCh-hhccCCCCCEEEecCCcccccccccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCcc
Confidence 57999999998 454 48999999999999999987764 5899999999988765 34444 8999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSD 154 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~ 154 (790)
++..| +.++++|++|+|++|++++..| +..+++|+.|+|++|++++..| +.. ++|+.|+|++|++++..| +
T Consensus 256 ~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~ 327 (466)
T 1o6v_A 256 SNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--V 327 (466)
T ss_dssp CCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--G
T ss_pred ccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--h
Confidence 96655 8999999999999999996444 8999999999999999997655 444 899999999999998776 7
Q ss_pred CCCCcceeeecCCCC
Q 040908 155 CQNGAVNLFASSSKG 169 (790)
Q Consensus 155 ~~~~~l~~~~~~~~~ 169 (790)
..++.|+.++.+.+.
T Consensus 328 ~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 328 SSLTKLQRLFFYNNK 342 (466)
T ss_dssp GGCTTCCEEECCSSC
T ss_pred ccCccCCEeECCCCc
Confidence 788999999987764
No 365
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.47 E-value=7.1e-14 Score=135.89 Aligned_cols=157 Identities=22% Similarity=0.290 Sum_probs=115.2
Q ss_pred EEeecCCceeEecCCeeeecCCCcc--cccceeccCCCceeeeccccccCCCCCCceeeeccccccCCchhhhhhhhcCC
Q 040908 191 VHINCGGSEVTVNGSTTFEEDTDEA--TAARFGFTGTNHWAFSSTGHFLDDKSPDTNIQKNTSRLLMDDFQLYTEARVSP 268 (790)
Q Consensus 191 ~~~~c~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 268 (790)
..++|||...+-.++..++.|..-. +.+.. + +. .. ......+.+++||+|||.+|
T Consensus 8 ~~INcGg~~~~d~~gr~w~~D~~~~~~g~~~~-------~-----~~-------~~----~~~~~~~~~~~lY~TaR~~~ 64 (174)
T 2jwp_A 8 WAVNAGGESHVDVHGIHYRKDPLEGRVGRASD-------Y-----GM-------KL----PILRSNPEDQVLYQTERYNE 64 (174)
T ss_dssp EEEEETSSSEEETTTEEECSSCSSTTCCCCCC-------C-----CT-------TS----CCSSSCHHHHHTTTCCCCCC
T ss_pred EEEECCCCCccCCCCCEEcCCcCcccCCcccc-------c-----cc-------ce----EecccCCCCchhhhhhccCC
Confidence 4689999887656677888775321 11110 0 00 00 01123556789999999999
Q ss_pred cccceEEeeccCCeeeeeeecceeeeccccccccccceEEEEEecCccccccCCcchhcCCCCCcceeceeeeeecCeeE
Q 040908 269 ISLTYYVFCLENGNYKVNLHFAETMFTDDKTYKSLGRRIFDVYIQGKLELKDFNIEEEAGGVGKPIVKPFSAVVTNGTMD 348 (790)
Q Consensus 269 ~~l~~~~~~~~~g~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (790)
.+++|+..|..||.|.|+|||||+.+.+ .++|+|+|||++...+++|+|...+++ ..|..+.+.+.++++.+.
T Consensus 65 ~~~tY~f~v~~~G~Y~VrLhF~ei~~~~------~~~rvFdV~ing~~~l~~fdi~~~ag~-~~~~~~~~~~~v~~~~l~ 137 (174)
T 2jwp_A 65 DSFGYDIPIKEEGEYVLVLKFAEVYFAQ------SQQKVFDVRVNGHTVVKDLDIFDRVGH-STAHDEIIPISIKKGKLS 137 (174)
T ss_dssp SCEEEEEECCSCEEEEEEEEEECCSCCC------SSSSCEEEEETTEEEEEEECHHHHHSS-SSCEEEEEEEEEETTEEE
T ss_pred CCeEEEEEeCCCeEEEEEEEEeccccCC------CCCeEeEEEECCEEeecCcCHHHhhCC-CeeEEEEEEEEEecCcee
Confidence 9999999999999999999999998653 799999999999999999999998877 677888899999998888
Q ss_pred EEEEec-CCcceecCC--CCCCCCcccccccC
Q 040908 349 IRLYWA-GKGTTEIPD--RGVYGPLISAISLH 377 (790)
Q Consensus 349 ~~~~~a-g~~~~~~p~--~~~~gp~~s~~~~~ 377 (790)
++.+|+ +.|...+.- ....+|.++++.+.
T Consensus 138 i~~~~~~~~g~L~I~f~p~~~~~a~inaIEI~ 169 (174)
T 2jwp_A 138 VQGEVSTFTGKLSVEFVKGYYDNPKVCALFIM 169 (174)
T ss_dssp ETTEEEECCSEEEEEEECSSSCSSSEEEEEEE
T ss_pred eeeeecccCCeEEEEEeccCCCCcEEEEEEEE
Confidence 887665 455544321 12456777766554
No 366
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.46 E-value=3.2e-13 Score=133.93 Aligned_cols=122 Identities=20% Similarity=0.197 Sum_probs=104.4
Q ss_pred ceeccccCCCCCCCcccccCcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcc
Q 040908 44 DLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLL 123 (790)
Q Consensus 44 ~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l 123 (790)
.+++++|.+...+... ..+|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|
T Consensus 14 ~l~~~~~~l~~ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 14 VVRCSNKGLKVLPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EEECTTSCCSSCCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEEcCCCCCCcCCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 4555555555444221 257999999999998 8999999999999999999999987788899999999999999999
Q ss_pred cccCCccccC-CCCcEEeccCCccccCCCCCCCCCCcceeeecCCC
Q 040908 124 TGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 124 ~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
++..|..+.. ++|+.|+|++|+|++..+..+..+.+|..++.+.+
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 136 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 136 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSS
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCC
Confidence 9988887877 89999999999999877778999999999887654
No 367
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.45 E-value=4.7e-14 Score=133.58 Aligned_cols=126 Identities=12% Similarity=0.067 Sum_probs=100.2
Q ss_pred cccCcccccCcccc-ccccccccceeccccCCCCCCCcccccCcccEEEeccccccccCCccccCCCCCCEEEccCCcCC
Q 040908 22 IHSGKWFGWANSVW-HYFSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLN 100 (790)
Q Consensus 22 ~~L~~L~l~~N~l~-~~~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 100 (790)
++|+.|++++|.++ +..|..+..+ ++|+.|+|++|+|++. ..++++++|++|+|++|+++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l-----------------~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~ 77 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEF-----------------EELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVS 77 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTC-----------------TTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhc-----------------CCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCccc
Confidence 45566666666655 3333333322 6899999999999965 78999999999999999999
Q ss_pred cCcchhccCCCCCcEEEeeCCccccc-CCccccC-CCCcEEeccCCccccCCC---CCCCCCCcceeeecC
Q 040908 101 GTIPESFARLADVDFIYLTGNLLTGK-VPQWMFG-RGPENIDLSYNNFADESS---GSDCQNGAVNLFASS 166 (790)
Q Consensus 101 g~ip~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~-~~L~~l~ls~N~l~g~~p---~~~~~~~~l~~~~~~ 166 (790)
+.+|..+.++++|+.|+|++|++++. .|..+.. ++|+.|+|++|++++..+ ..+..+++|+.++.+
T Consensus 78 ~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 78 GGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp SCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred chHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 88999999999999999999999974 3455666 899999999999998765 467777888777653
No 368
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.45 E-value=1.9e-13 Score=148.39 Aligned_cols=159 Identities=11% Similarity=0.112 Sum_probs=129.2
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc----ccccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS----ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~----~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
++|+|++|.....++ .+..+++|+.|++++|.+....+ .+|+.|++++|.+...+. +.. ++|+.|++++|.+
T Consensus 135 ~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l 211 (347)
T 4fmz_A 135 YSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQI 211 (347)
T ss_dssp CEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred eEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchhhccCCCCCEEEccCCccccccc--ccCCCccceeecccCCC
Confidence 479999997764544 49999999999999999886653 489999999998876544 444 8899999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccccCCCCCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFADESSGSD 154 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~ 154 (790)
++..+ +..+++|++|+|++|++++ +|. +..+++|+.|+|++|++++. + .+.. ++|+.|+|++|++++. ..+
T Consensus 212 ~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~~--~~~ 283 (347)
T 4fmz_A 212 TDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDI-N-AVKDLTKLKMLNVGSNQISDI--SVL 283 (347)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCC--GGG
T ss_pred CCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCC-h-hHhcCCCcCEEEccCCccCCC--hhh
Confidence 85544 8899999999999999984 454 89999999999999999864 4 3444 8999999999999875 457
Q ss_pred CCCCcceeeecCCCCC
Q 040908 155 CQNGAVNLFASSSKGS 170 (790)
Q Consensus 155 ~~~~~l~~~~~~~~~~ 170 (790)
..+++|+.++.+.+..
T Consensus 284 ~~l~~L~~L~L~~n~l 299 (347)
T 4fmz_A 284 NNLSQLNSLFLNNNQL 299 (347)
T ss_dssp GGCTTCSEEECCSSCC
T ss_pred cCCCCCCEEECcCCcC
Confidence 7888899998877643
No 369
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.44 E-value=4.9e-13 Score=155.97 Aligned_cols=128 Identities=16% Similarity=0.132 Sum_probs=61.7
Q ss_pred ccCcccccCcccccc--ccccccceeccccCCCCCCCcccccCcccEEEeccccccccCCccccCCCCCCEEEccCCcCC
Q 040908 23 HSGKWFGWANSVWHY--FSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLN 100 (790)
Q Consensus 23 ~L~~L~l~~N~l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 100 (790)
+|+.|+|++|++++. .+.+|+.|++++|.+...+ ...++|+.|+|++|+|+ .+|.. +++|+.|+|++|+|+
T Consensus 142 ~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~---~~~~~L~~L~Ls~N~l~-~l~~~---~~~L~~L~L~~N~l~ 214 (622)
T 3g06_A 142 GLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLP---MLPSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLT 214 (622)
T ss_dssp TCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS
T ss_pred CCCEEECcCCcCCCcCCccCCCCEEECCCCCCCCCc---ccCCCCcEEECCCCCCC-CCCCc---cchhhEEECcCCccc
Confidence 344444444444432 1234444444444444332 11145666666666665 34432 234444444444444
Q ss_pred cCcchhccCCCCCcEEEeeCCcccccCCccccCCCCcEEeccCCccccCCCCCCCCCCcceeeecCCC
Q 040908 101 GTIPESFARLADVDFIYLTGNLLTGKVPQWMFGRGPENIDLSYNNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 101 g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
.+|. .+++|+.|+|++|+|++ +|.. .++|+.|+|++|+|+. +|. .+.+|..++.+.+
T Consensus 215 -~l~~---~~~~L~~L~Ls~N~L~~-lp~~--l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N 271 (622)
T 3g06_A 215 -SLPA---LPSGLKELIVSGNRLTS-LPVL--PSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRN 271 (622)
T ss_dssp -SCCC---CCTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSS
T ss_pred -ccCC---CCCCCCEEEccCCccCc-CCCC--CCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCC
Confidence 3332 13556667777776664 4411 1556667777776663 443 3345555655544
No 370
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.44 E-value=1.7e-13 Score=132.59 Aligned_cols=128 Identities=14% Similarity=0.145 Sum_probs=100.2
Q ss_pred cccccceeccccCCC--CCCCccccc-CcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcE
Q 040908 39 SESLTDLRISDLNGP--EATLPDLRN-RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDF 115 (790)
Q Consensus 39 ~~~L~~L~l~~n~~~--~~~~~~~~~-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~ 115 (790)
|.+|+.|++++|.+. ..+ ..+.. ++|++|+|++|.|++. ..++.+++|++|+|++|++++.+|..+.++++|+.
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIE-GLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCS-SCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred cccCCEEECCCCCCChhhHH-HHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 344555555555444 121 11222 7899999999999965 78999999999999999999889999999999999
Q ss_pred EEeeCCcccccCC-ccccC-CCCcEEeccCCccccCCC---CCCCCCCcceeeecCCCC
Q 040908 116 IYLTGNLLTGKVP-QWMFG-RGPENIDLSYNNFADESS---GSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 116 L~ls~N~l~g~~p-~~~~~-~~L~~l~ls~N~l~g~~p---~~~~~~~~l~~~~~~~~~ 169 (790)
|+|++|++++..+ ..+.. ++|+.|+|++|++++..+ ..+..+++|+.++.+.+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETT
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCC
Confidence 9999999997532 55555 899999999999997655 478888899888876553
No 371
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.43 E-value=1.5e-14 Score=158.38 Aligned_cols=169 Identities=18% Similarity=0.120 Sum_probs=131.3
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc-----------ccccceeccccCCCCCCCccccc------C
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS-----------ESLTDLRISDLNGPEATLPDLRN------R 63 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~-----------~~L~~L~l~~n~~~~~~~~~~~~------~ 63 (790)
++++|+.|+++|.+|..+....+|+.|+|++|.++...+ .+|+.|++++|.+.......+.. +
T Consensus 1 ~~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 1 MNYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp CEEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred CccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 578999999999999888877789999999999986553 27899999999888766554443 6
Q ss_pred cccEEEeccccccccCCccccC----C-CCCCEEEccCCcCCcCcchhcc----C-CCCCcEEEeeCCcccccCCc----
Q 040908 64 TFKNLILRSCNLTGELPHFLGE----V-SEMKVLDLSFNKLNGTIPESFA----R-LADVDFIYLTGNLLTGKVPQ---- 129 (790)
Q Consensus 64 ~L~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~Ls~N~l~g~ip~~~~----~-l~~L~~L~ls~N~l~g~~p~---- 129 (790)
+|++|+|++|+|++..+..++. + ++|++|+|++|+|++..+..+. . .++|+.|+|++|++++..+.
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 8999999999999777765444 4 8999999999999876665543 3 36899999999999864433
Q ss_pred cccC--CCCcEEeccCCccccCCCCCCCC----C-CcceeeecCCCC
Q 040908 130 WMFG--RGPENIDLSYNNFADESSGSDCQ----N-GAVNLFASSSKG 169 (790)
Q Consensus 130 ~~~~--~~L~~l~ls~N~l~g~~p~~~~~----~-~~l~~~~~~~~~ 169 (790)
.+.. .+|+.|+|++|+|++..+..++. + ..|+.++.+.+.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 207 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANL 207 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSC
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCC
Confidence 3333 38999999999998876654443 3 578888887664
No 372
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=3.1e-13 Score=131.20 Aligned_cols=87 Identities=21% Similarity=0.184 Sum_probs=70.3
Q ss_pred CcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEec
Q 040908 63 RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDL 141 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~l 141 (790)
++|+.|+|++|+|++..|..|+++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+.. ++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 46888888888888777888888888888888888888666666788888888888888888776666665 78888888
Q ss_pred cCCccccC
Q 040908 142 SYNNFADE 149 (790)
Q Consensus 142 s~N~l~g~ 149 (790)
++|+++..
T Consensus 110 ~~N~~~c~ 117 (170)
T 3g39_A 110 LNNPWDCA 117 (170)
T ss_dssp CSSCBCTT
T ss_pred CCCCCCCC
Confidence 88888743
No 373
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.42 E-value=2.8e-14 Score=156.24 Aligned_cols=172 Identities=16% Similarity=0.039 Sum_probs=123.8
Q ss_pred CEEEccCCcCcccCC----hhhhccc-ccCcccccCcccccccc-----------ccccceeccccCCCCCCCccccc--
Q 040908 1 MYRTVQSNRLSGELP----EELGSLI-HSGKWFGWANSVWHYFS-----------ESLTDLRISDLNGPEATLPDLRN-- 62 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP----~~~~~L~-~L~~L~l~~N~l~~~~~-----------~~L~~L~l~~n~~~~~~~~~~~~-- 62 (790)
++|||++|+|++..+ ..|..++ +|+.|+|++|.+....+ .+|+.|++++|.+.......+..
T Consensus 25 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l 104 (362)
T 3goz_A 25 TSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTL 104 (362)
T ss_dssp CEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHH
T ss_pred eEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHH
Confidence 478999999986555 6677787 89999999999886543 57888999998887655442221
Q ss_pred ----CcccEEEeccccccccCCcccc----C-CCCCCEEEccCCcCCc----CcchhccCCC-CCcEEEeeCCcccccCC
Q 040908 63 ----RTFKNLILRSCNLTGELPHFLG----E-VSEMKVLDLSFNKLNG----TIPESFARLA-DVDFIYLTGNLLTGKVP 128 (790)
Q Consensus 63 ----~~L~~L~L~~N~l~~~~p~~~~----~-l~~L~~L~Ls~N~l~g----~ip~~~~~l~-~L~~L~ls~N~l~g~~p 128 (790)
++|+.|+|++|+|++..+..+. . .++|++|+|++|+|+. .++..+..++ +|+.|+|++|++++..+
T Consensus 105 ~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 184 (362)
T 3goz_A 105 AAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNC 184 (362)
T ss_dssp HTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH
T ss_pred HhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhH
Confidence 5799999999999866655543 3 3689999999999885 3444556665 89999999999887766
Q ss_pred cccc----C--CCCcEEeccCCccccC----CCCCCCC-CCcceeeecCCCCCCC
Q 040908 129 QWMF----G--RGPENIDLSYNNFADE----SSGSDCQ-NGAVNLFASSSKGSNS 172 (790)
Q Consensus 129 ~~~~----~--~~L~~l~ls~N~l~g~----~p~~~~~-~~~l~~~~~~~~~~~~ 172 (790)
..+. . .+|+.|||++|+|++. ++..+.. .+.|+.++.+.+.-..
T Consensus 185 ~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 185 AELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp HHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred HHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 4332 2 4789999999998864 3333333 3478888887765443
No 374
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.42 E-value=1.2e-12 Score=127.61 Aligned_cols=124 Identities=15% Similarity=0.138 Sum_probs=102.3
Q ss_pred cceeccccCCCCCCCcccccCcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCc
Q 040908 43 TDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNL 122 (790)
Q Consensus 43 ~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~ 122 (790)
+.++++++.+...+... .++|+.|+|++|+|++..+..|+++++|++|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 10 ~~l~~~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp TEEECCSSCCSSCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEecCCCCccCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 44555555555444222 2689999999999997667778999999999999999996666778999999999999999
Q ss_pred ccccCCccccC-CCCcEEeccCCccccCCCCCCCCCCcceeeecCCC
Q 040908 123 LTGKVPQWMFG-RGPENIDLSYNNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 123 l~g~~p~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
+++..+..+.. ++|+.|+|++|+|++..+..+..+..|..++.+.+
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 134 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 134 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCC
Confidence 99887777766 89999999999999877767788999999988665
No 375
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.41 E-value=4.5e-14 Score=168.37 Aligned_cols=137 Identities=13% Similarity=0.070 Sum_probs=110.7
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccccc-----ccccceeccccCCCCCCCcccccCcccEEEeccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS-----ESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNL 75 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~-----~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l 75 (790)
+.|+|++|+|. .+|..+.+|++|+.|+|++|.|+.+++ .+|+.|+|++|.+..++......++|++|+|++|.|
T Consensus 227 ~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l 305 (727)
T 4b8c_D 227 HALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMV 305 (727)
T ss_dssp CEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCC
T ss_pred cEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCC
Confidence 47999999999 999999999999999999999995443 279999999999996644433348999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCC-CcEEEeeCCcccccCCccccCCCCcEEeccCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLAD-VDFIYLTGNLLTGKVPQWMFGRGPENIDLSYN 144 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~-L~~L~ls~N~l~g~~p~~~~~~~L~~l~ls~N 144 (790)
+ .+|..|++|++|++|+|++|+|+|.+|..+..+.. +..|+|++|.++|.+|.. |..|+++.|
T Consensus 306 ~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~-----l~~l~l~~n 369 (727)
T 4b8c_D 306 T-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE-----RRFIEINTD 369 (727)
T ss_dssp C-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--------------
T ss_pred C-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc-----cceeEeecc
Confidence 8 89999999999999999999999999998876543 335899999999999864 566777777
No 376
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.41 E-value=1.7e-14 Score=159.26 Aligned_cols=171 Identities=13% Similarity=0.043 Sum_probs=124.8
Q ss_pred CEEEccCCcCcccCChh----hhcccccCcccccCccc---ccccc-------------ccccceeccccCCCCCC----
Q 040908 1 MYRTVQSNRLSGELPEE----LGSLIHSGKWFGWANSV---WHYFS-------------ESLTDLRISDLNGPEAT---- 56 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~----~~~L~~L~~L~l~~N~l---~~~~~-------------~~L~~L~l~~n~~~~~~---- 56 (790)
++|+|++|+|++..+.. |..+++|+.|+|++|.+ .+..| .+|+.|++++|.+....
T Consensus 35 ~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l 114 (386)
T 2ca6_A 35 KEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPL 114 (386)
T ss_dssp CEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHH
T ss_pred cEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHH
Confidence 47899999998765544 56788899999988643 33322 47888888888877632
Q ss_pred Cccccc-CcccEEEeccccccccCCcccc----CC---------CCCCEEEccCCcCC-cCcc---hhccCCCCCcEEEe
Q 040908 57 LPDLRN-RTFKNLILRSCNLTGELPHFLG----EV---------SEMKVLDLSFNKLN-GTIP---ESFARLADVDFIYL 118 (790)
Q Consensus 57 ~~~~~~-~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~Ls~N~l~-g~ip---~~~~~l~~L~~L~l 118 (790)
+..+.. ++|+.|+|++|.|++..+..+. .+ ++|++|+|++|+|+ +.+| ..+..+++|+.|+|
T Consensus 115 ~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 194 (386)
T 2ca6_A 115 IDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKM 194 (386)
T ss_dssp HHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEEC
T ss_pred HHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEEC
Confidence 223333 7899999999998754444443 33 88999999999987 5566 46778889999999
Q ss_pred eCCccc--c---cCCccccC-CCCcEEeccCCccc----cCCCCCCCCCCcceeeecCCCCCC
Q 040908 119 TGNLLT--G---KVPQWMFG-RGPENIDLSYNNFA----DESSGSDCQNGAVNLFASSSKGSN 171 (790)
Q Consensus 119 s~N~l~--g---~~p~~~~~-~~L~~l~ls~N~l~----g~~p~~~~~~~~l~~~~~~~~~~~ 171 (790)
++|+++ | .+|..+.. ++|+.|+|++|.|+ +.+|..+..++.|+.++.+.+...
T Consensus 195 ~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~ 257 (386)
T 2ca6_A 195 VQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLS 257 (386)
T ss_dssp CSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCC
T ss_pred cCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCc
Confidence 999887 3 34434544 78999999999986 667777888888888888766543
No 377
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.41 E-value=2.7e-14 Score=154.29 Aligned_cols=168 Identities=15% Similarity=0.139 Sum_probs=132.0
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCcccccc-cc------ccccceeccccCCCCCCCccccc-CcccEEEecc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHY-FS------ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRS 72 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~-~~------~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~ 72 (790)
++|+|++|.+++..|. +..+++|+.|++++|.++.. .+ .+|+.|++++|.+....+..+.. ++|++|+|++
T Consensus 73 ~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~ 151 (336)
T 2ast_B 73 IAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSG 151 (336)
T ss_dssp SEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTT
T ss_pred eEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCC
Confidence 4688999999866555 66789999999999988753 33 37888889888766443334444 7899999999
Q ss_pred c-ccccc-CCccccCCCCCCEEEccCC-cCCcC-cchhccCCC-CCcEEEeeCC--ccc-ccCCccccC-CCCcEEeccC
Q 040908 73 C-NLTGE-LPHFLGEVSEMKVLDLSFN-KLNGT-IPESFARLA-DVDFIYLTGN--LLT-GKVPQWMFG-RGPENIDLSY 143 (790)
Q Consensus 73 N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~g~-ip~~~~~l~-~L~~L~ls~N--~l~-g~~p~~~~~-~~L~~l~ls~ 143 (790)
| .+++. +|..+.++++|++|+|++| ++++. +|..+..++ +|+.|+|++| .++ +.+|..+.. ++|+.|+|++
T Consensus 152 ~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~ 231 (336)
T 2ast_B 152 CSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSD 231 (336)
T ss_dssp CBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTT
T ss_pred CCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCC
Confidence 9 68763 7777888999999999999 88864 688888899 9999999999 455 455665555 8899999999
Q ss_pred Cc-cccCCCCCCCCCCcceeeecCCCC
Q 040908 144 NN-FADESSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 144 N~-l~g~~p~~~~~~~~l~~~~~~~~~ 169 (790)
|. +++..+..+..+++|+.++.+.+.
T Consensus 232 ~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 232 SVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp CTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 98 777777888888899999887764
No 378
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.41 E-value=2e-13 Score=133.23 Aligned_cols=83 Identities=14% Similarity=0.251 Sum_probs=47.7
Q ss_pred CcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcch--hccCCCCCcEEEeeCCcccccCCcc----ccC-CC
Q 040908 63 RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPE--SFARLADVDFIYLTGNLLTGKVPQW----MFG-RG 135 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~--~~~~l~~L~~L~ls~N~l~g~~p~~----~~~-~~ 135 (790)
++|++|+|++|+|++..|..|+++++|++|+|++|+|+ .+|. .+..+++|+.|+|++|.++. +|.. +.. ++
T Consensus 64 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~ 141 (176)
T 1a9n_A 64 RRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQ 141 (176)
T ss_dssp SSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTT
T ss_pred CCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCc
Confidence 45666666666666333333466666666666666664 4554 56666666666666666653 3332 333 56
Q ss_pred CcEEeccCCccc
Q 040908 136 PENIDLSYNNFA 147 (790)
Q Consensus 136 L~~l~ls~N~l~ 147 (790)
|+.||+++|.+.
T Consensus 142 L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 142 VRVLDFQKVKLK 153 (176)
T ss_dssp CSEETTEECCHH
T ss_pred cceeCCCcCCHH
Confidence 666666666553
No 379
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.41 E-value=1.9e-14 Score=155.45 Aligned_cols=166 Identities=15% Similarity=0.055 Sum_probs=130.1
Q ss_pred CEEEccCCcCcccCChhhhcc--cccCcccccCcccccccc-----ccccceeccccCCCCC-CCccccc-CcccEEEec
Q 040908 1 MYRTVQSNRLSGELPEELGSL--IHSGKWFGWANSVWHYFS-----ESLTDLRISDLNGPEA-TLPDLRN-RTFKNLILR 71 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L--~~L~~L~l~~N~l~~~~~-----~~L~~L~l~~n~~~~~-~~~~~~~-~~L~~L~L~ 71 (790)
+.|||++|++. |..+..+ ++|+.|++++|.+.+..+ .+|+.|++++|.+... ....+.. ++|++|+|+
T Consensus 50 ~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~ 126 (336)
T 2ast_B 50 QTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLE 126 (336)
T ss_dssp SEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECT
T ss_pred eeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCc
Confidence 36889998887 5667777 889999999999887665 4788889988876543 2223333 789999999
Q ss_pred cccccccCCccccCCCCCCEEEccCC-cCCc-CcchhccCCCCCcEEEeeCC-ccccc-CCccccC-C-CCcEEeccCC-
Q 040908 72 SCNLTGELPHFLGEVSEMKVLDLSFN-KLNG-TIPESFARLADVDFIYLTGN-LLTGK-VPQWMFG-R-GPENIDLSYN- 144 (790)
Q Consensus 72 ~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g-~ip~~~~~l~~L~~L~ls~N-~l~g~-~p~~~~~-~-~L~~l~ls~N- 144 (790)
+|.+++..|..++++++|++|+|++| .+++ .+|..+.++++|+.|+|++| .+++. ++..+.. + +|+.|+|++|
T Consensus 127 ~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 127 GLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp TCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred CcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 99998888888999999999999999 6775 37777888999999999999 88864 5555555 7 8999999999
Q ss_pred -ccc-cCCCCCCCCCCcceeeecCCCC
Q 040908 145 -NFA-DESSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 145 -~l~-g~~p~~~~~~~~l~~~~~~~~~ 169 (790)
.++ +.+|..+..+++|+.++.+.+.
T Consensus 207 ~~~~~~~l~~~~~~~~~L~~L~l~~~~ 233 (336)
T 2ast_B 207 KNLQKSDLSTLVRRCPNLVHLDLSDSV 233 (336)
T ss_dssp GGSCHHHHHHHHHHCTTCSEEECTTCT
T ss_pred ccCCHHHHHHHHhhCCCCCEEeCCCCC
Confidence 565 4556666677888888887664
No 380
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.40 E-value=3.8e-13 Score=146.46 Aligned_cols=167 Identities=13% Similarity=0.045 Sum_probs=103.8
Q ss_pred CEEEccCCcCcccCCh-hhhcccccCcccccCccccccccc-------ccc-ceeccccCCCCCCCccccc-CcccEEEe
Q 040908 1 MYRTVQSNRLSGELPE-ELGSLIHSGKWFGWANSVWHYFSE-------SLT-DLRISDLNGPEATLPDLRN-RTFKNLIL 70 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~-~~~~L~~L~~L~l~~N~l~~~~~~-------~L~-~L~l~~n~~~~~~~~~~~~-~~L~~L~L 70 (790)
++|+|++|+|+ .||. .|.+|++|++|+|++|++.+.+|. ++. .+.+..|++...+...+.. ++|++|++
T Consensus 33 ~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l 111 (350)
T 4ay9_X 33 IELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLI 111 (350)
T ss_dssp SEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEE
T ss_pred CEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccc
Confidence 46788888887 5554 577888888888888877654432 222 2344556666666666655 77788888
Q ss_pred ccccccccCCccccCCCCCCEEEccC-CcCCcCcchhccCCC-CCcEEEeeCCcccccCCccccCCCCcEEeccC-Cccc
Q 040908 71 RSCNLTGELPHFLGEVSEMKVLDLSF-NKLNGTIPESFARLA-DVDFIYLTGNLLTGKVPQWMFGRGPENIDLSY-NNFA 147 (790)
Q Consensus 71 ~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~ip~~~~~l~-~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ls~-N~l~ 147 (790)
++|+|++..+..+..+.++..|++++ |++....+..|..+. .|+.|+|++|+|+...+..+...+|+.|++++ |.++
T Consensus 112 ~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~ 191 (350)
T 4ay9_X 112 SNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLE 191 (350)
T ss_dssp EEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCC
T ss_pred cccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCccc
Confidence 88877755555566666666777754 455533334555554 46777777777775444444446677777764 4444
Q ss_pred cCCCCCCCCCCcceeeecCCC
Q 040908 148 DESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 148 g~~p~~~~~~~~l~~~~~~~~ 168 (790)
...+..|..+.+|+.++.+.+
T Consensus 192 ~i~~~~f~~l~~L~~LdLs~N 212 (350)
T 4ay9_X 192 ELPNDVFHGASGPVILDISRT 212 (350)
T ss_dssp CCCTTTTTTEECCSEEECTTS
T ss_pred CCCHHHhccCcccchhhcCCC
Confidence 333345566777777777655
No 381
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.39 E-value=2.6e-15 Score=149.65 Aligned_cols=141 Identities=15% Similarity=0.204 Sum_probs=102.7
Q ss_pred EEEccCCcCcccCCh------hhhcccccCcccccCccccccccccccceeccccCCCCCCCcccccCcccEEEeccccc
Q 040908 2 YRTVQSNRLSGELPE------ELGSLIHSGKWFGWANSVWHYFSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNL 75 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~------~~~~L~~L~~L~l~~N~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l 75 (790)
.++|+.|.|+|.+|. .|+.+++|+.|+|++|.+++. | .+..+ ++|+.|+|++|+|
T Consensus 22 ~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l-~-~~~~l-----------------~~L~~L~l~~n~l 82 (198)
T 1ds9_A 22 ATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKI-S-SLSGM-----------------ENLRILSLGRNLI 82 (198)
T ss_dssp CTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCC-C-CHHHH-----------------TTCCEEEEEEEEE
T ss_pred CcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCccc-c-ccccC-----------------CCCCEEECCCCCc
Confidence 356777777777776 788888888888888877662 2 33322 6788888888888
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCC-ccccC-CCCcEEeccCCccccCCCCC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVP-QWMFG-RGPENIDLSYNNFADESSGS 153 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~-~~L~~l~ls~N~l~g~~p~~ 153 (790)
+ .+|..+..+++|++|+|++|+|++ +| .+.++++|+.|+|++|++++..+ ..+.. ++|+.|++++|++++.+|..
T Consensus 83 ~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~ 159 (198)
T 1ds9_A 83 K-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKEN 159 (198)
T ss_dssp C-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTT
T ss_pred c-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccc
Confidence 8 778777778888888888888884 66 67888888888888888875432 24444 78888888888888776653
Q ss_pred ----------CCCCCcceeee
Q 040908 154 ----------DCQNGAVNLFA 164 (790)
Q Consensus 154 ----------~~~~~~l~~~~ 164 (790)
+..+++|+.++
T Consensus 160 ~~~~~~~~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 160 NATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp TTHHHHHHHHHHHCSSCSEEC
T ss_pred cchHHHHHHHHHhCCCcEEEC
Confidence 55556666554
No 382
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=6.4e-13 Score=129.47 Aligned_cols=86 Identities=19% Similarity=0.176 Sum_probs=68.6
Q ss_pred CcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEec
Q 040908 63 RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDL 141 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~l 141 (790)
++|+.|+|++|+|++..|..|+++++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..+.. ++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 56888888888888777888888888888888888888654555788888888888888888766655655 78888888
Q ss_pred cCCcccc
Q 040908 142 SYNNFAD 148 (790)
Q Consensus 142 s~N~l~g 148 (790)
++|++..
T Consensus 113 ~~N~~~c 119 (174)
T 2r9u_A 113 YNNPWDC 119 (174)
T ss_dssp CSSCBCT
T ss_pred CCCCccc
Confidence 8888864
No 383
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.39 E-value=1.2e-12 Score=127.11 Aligned_cols=101 Identities=17% Similarity=0.093 Sum_probs=63.0
Q ss_pred ccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccC
Q 040908 65 FKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSY 143 (790)
Q Consensus 65 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~ 143 (790)
.+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+.. ++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 456666666666 4665553 66666666666666555666666666666666666666555554444 6666666666
Q ss_pred CccccCCCCCCCCCCcceeeecCCC
Q 040908 144 NNFADESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 144 N~l~g~~p~~~~~~~~l~~~~~~~~ 168 (790)
|+|++..+..+..+.+|+.++.+.+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N 112 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNN 112 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCC
Confidence 6666655555666666666666544
No 384
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.38 E-value=1e-12 Score=153.27 Aligned_cols=151 Identities=21% Similarity=0.223 Sum_probs=122.2
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccc--cccccceeccccCCCCCCCcccccCcccEEEecccccccc
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYF--SESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGE 78 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~ 78 (790)
++|+|++|+|+ .+|. .+.+|+.|++++|.++..+ +.+|+.|++++|.+...+.. .++|+.|+|++|+|+ .
T Consensus 144 ~~L~Ls~N~l~-~l~~---~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~-~ 215 (622)
T 3g06_A 144 QELSVSDNQLA-SLPA---LPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLT-S 215 (622)
T ss_dssp CEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCS-S
T ss_pred CEEECcCCcCC-CcCC---ccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCCCCCc---cchhhEEECcCCccc-c
Confidence 46788888887 4664 3467889999999998754 35899999999988865431 268999999999998 6
Q ss_pred CCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccCCCCcEEeccCCccccCCCCCCCCCC
Q 040908 79 LPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFGRGPENIDLSYNNFADESSGSDCQNG 158 (790)
Q Consensus 79 ~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~ 158 (790)
+|.. +++|+.|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. ..++|+.|+|++|+|+ .+|..+..++
T Consensus 216 l~~~---~~~L~~L~Ls~N~L~-~lp---~~l~~L~~L~Ls~N~L~~-lp~--~~~~L~~L~Ls~N~L~-~lp~~l~~l~ 284 (622)
T 3g06_A 216 LPAL---PSGLKELIVSGNRLT-SLP---VLPSELKELMVSGNRLTS-LPM--LPSGLLSLSVYRNQLT-RLPESLIHLS 284 (622)
T ss_dssp CCCC---CTTCCEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCC-SCCGGGGGSC
T ss_pred cCCC---CCCCCEEEccCCccC-cCC---CCCCcCcEEECCCCCCCc-CCc--ccccCcEEeCCCCCCC-cCCHHHhhcc
Confidence 7753 488999999999998 477 567889999999999994 565 3478999999999999 7788899999
Q ss_pred cceeeecCCCCC
Q 040908 159 AVNLFASSSKGS 170 (790)
Q Consensus 159 ~l~~~~~~~~~~ 170 (790)
+|..++.+.+.-
T Consensus 285 ~L~~L~L~~N~l 296 (622)
T 3g06_A 285 SETTVNLEGNPL 296 (622)
T ss_dssp TTCEEECCSCCC
T ss_pred ccCEEEecCCCC
Confidence 999999876643
No 385
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.34 E-value=3.1e-12 Score=124.63 Aligned_cols=102 Identities=16% Similarity=0.146 Sum_probs=80.0
Q ss_pred ccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccC
Q 040908 65 FKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSY 143 (790)
Q Consensus 65 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~ 143 (790)
-+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+.. ++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 357888888886 7787664 78888888888888777888888888888888888888766655555 7888888888
Q ss_pred CccccCCCCCCCCCCcceeeecCCCC
Q 040908 144 NNFADESSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 144 N~l~g~~p~~~~~~~~l~~~~~~~~~ 169 (790)
|+|++..+..+..+.+|..++.+.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~ 116 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNP 116 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSC
T ss_pred CccceeCHHHhccccCCCEEEeCCCC
Confidence 88887666668888888888876553
No 386
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.32 E-value=2.1e-12 Score=140.51 Aligned_cols=163 Identities=18% Similarity=0.082 Sum_probs=126.5
Q ss_pred CEEEccCCcCcccCCh-hhhcccccCc-ccccCccccccccc------cccceeccccCCCCCCCccccc-CcccEEEec
Q 040908 1 MYRTVQSNRLSGELPE-ELGSLIHSGK-WFGWANSVWHYFSE------SLTDLRISDLNGPEATLPDLRN-RTFKNLILR 71 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~-~~~~L~~L~~-L~l~~N~l~~~~~~------~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~ 71 (790)
++|+|++|+|.+.+|. .|.+|++|.. +.+..|+++...|. +|+.|++++|.+...+...+.. .++..|++.
T Consensus 57 ~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~ 136 (350)
T 4ay9_X 57 EKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQ 136 (350)
T ss_dssp CEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEE
T ss_pred CEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhc
Confidence 5899999999878886 5788988775 67778999887663 7888999999998776655444 778899997
Q ss_pred c-ccccccCCccccCCC-CCCEEEccCCcCCcCcchhccCCCCCcEEEeeC-CcccccCC-ccccC-CCCcEEeccCCcc
Q 040908 72 S-CNLTGELPHFLGEVS-EMKVLDLSFNKLNGTIPESFARLADVDFIYLTG-NLLTGKVP-QWMFG-RGPENIDLSYNNF 146 (790)
Q Consensus 72 ~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~-N~l~g~~p-~~~~~-~~L~~l~ls~N~l 146 (790)
+ |++....+..|..+. .|+.|+|++|+|+ .+|.......+|+.|++++ |.++ .+| ..+.. .+|+.|||++|+|
T Consensus 137 ~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l 214 (350)
T 4ay9_X 137 DNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRI 214 (350)
T ss_dssp SCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCC
T ss_pred cccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCc
Confidence 6 677755555777765 6899999999998 6777777778999999986 5555 555 45555 8999999999999
Q ss_pred ccCCCCCCCCCCcceeeec
Q 040908 147 ADESSGSDCQNGAVNLFAS 165 (790)
Q Consensus 147 ~g~~p~~~~~~~~l~~~~~ 165 (790)
+...+..+..+.+|..+..
T Consensus 215 ~~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 215 HSLPSYGLENLKKLRARST 233 (350)
T ss_dssp CCCCSSSCTTCCEEECTTC
T ss_pred CccChhhhccchHhhhccC
Confidence 9766666766666655443
No 387
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.27 E-value=2.8e-11 Score=125.76 Aligned_cols=147 Identities=14% Similarity=0.095 Sum_probs=115.6
Q ss_pred HHHHhcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccC-CCceeeeeeEEEeCCeEEE
Q 040908 441 IKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQ-HPHLVKLYGCCIEGNQLLL 519 (790)
Q Consensus 441 ~~~~~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~l 519 (790)
+...-+.|++...++.|+.+.||++... ++.+++|+...........+.+|+.+++.+. |..+.++++++...+..++
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3344567888899999999999999864 6789999986532233346889999999884 6778889999998889999
Q ss_pred EEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhc----------------------------------
Q 040908 520 IYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEE---------------------------------- 565 (790)
Q Consensus 520 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~---------------------------------- 565 (790)
||||++|.+|.+.+. +......++.+++++|+.||+.
T Consensus 88 v~e~i~G~~l~~~~~---------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 88 LMSEADGVLCSEEYE---------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EEECCSSEEHHHHCC---------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred EEEecCCeehhhccC---------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 999999999887641 1223457889999999999981
Q ss_pred ----------------------CCCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 566 ----------------------SRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 566 ----------------------~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
....++|+|+++.|||++++..+.|+||+.+.
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 11458999999999999876666799998765
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.26 E-value=4.7e-12 Score=123.38 Aligned_cols=102 Identities=12% Similarity=0.053 Sum_probs=84.4
Q ss_pred CcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCc--cccC-CCCcEE
Q 040908 63 RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQ--WMFG-RGPENI 139 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~--~~~~-~~L~~l 139 (790)
++|+.|+|++|+|++. +.|+++++|++|+|++|+|++..|..|..+++|+.|+|++|+++ .+|. .+.. ++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 4899999999999965 67999999999999999999544455699999999999999996 4555 5555 899999
Q ss_pred eccCCccccCCCCC----CCCCCcceeeecCCC
Q 040908 140 DLSYNNFADESSGS----DCQNGAVNLFASSSK 168 (790)
Q Consensus 140 ~ls~N~l~g~~p~~----~~~~~~l~~~~~~~~ 168 (790)
+|++|+++. +|.. +..++.|+.++.+.+
T Consensus 119 ~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n 150 (176)
T 1a9n_A 119 CILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKV 150 (176)
T ss_dssp ECCSSGGGG-STTHHHHHHHHCTTCSEETTEEC
T ss_pred EecCCCCCC-cHhHHHHHHHHCCccceeCCCcC
Confidence 999999984 4553 777788888776543
No 389
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=7.4e-12 Score=135.87 Aligned_cols=85 Identities=18% Similarity=0.135 Sum_probs=51.2
Q ss_pred CcccEEEecc-ccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccCCCCcEEec
Q 040908 63 RTFKNLILRS-CNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFGRGPENIDL 141 (790)
Q Consensus 63 ~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l 141 (790)
++|+.|+|++ |+|++..|..|++|++|++|+|++|+|++..|..|.+|++|+.|+|++|+|++..|..+....|+.|+|
T Consensus 31 ~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~L~~l~l 110 (347)
T 2ifg_A 31 ENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVL 110 (347)
T ss_dssp SCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCCCCEEEC
T ss_pred CCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCCceEEEe
Confidence 4566666664 666655555666666666666666666665555666666666666666666654444444444666666
Q ss_pred cCCccc
Q 040908 142 SYNNFA 147 (790)
Q Consensus 142 s~N~l~ 147 (790)
++|+|.
T Consensus 111 ~~N~~~ 116 (347)
T 2ifg_A 111 SGNPLH 116 (347)
T ss_dssp CSSCCC
T ss_pred eCCCcc
Confidence 666664
No 390
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.26 E-value=2.2e-13 Score=153.75 Aligned_cols=167 Identities=16% Similarity=0.057 Sum_probs=83.3
Q ss_pred EEEccCCcCccc----CChhhhcccccCcccccCcccccc-----------ccccccceeccccCCCCCC----Ccccc-
Q 040908 2 YRTVQSNRLSGE----LPEELGSLIHSGKWFGWANSVWHY-----------FSESLTDLRISDLNGPEAT----LPDLR- 61 (790)
Q Consensus 2 ~L~Ls~N~l~g~----iP~~~~~L~~L~~L~l~~N~l~~~-----------~~~~L~~L~l~~n~~~~~~----~~~~~- 61 (790)
+|+|++|++++. +|..+..+++|+.|++++|.+... ...+|+.|++++|.+.... ...+.
T Consensus 203 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 282 (461)
T 1z7x_W 203 ALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRA 282 (461)
T ss_dssp EEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHH
T ss_pred EEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhh
Confidence 455555555532 344455555555555555555421 0234555555555444321 11111
Q ss_pred cCcccEEEeccccccccCCccccC-----CCCCCEEEccCCcCCcC----cchhccCCCCCcEEEeeCCcccccCCcccc
Q 040908 62 NRTFKNLILRSCNLTGELPHFLGE-----VSEMKVLDLSFNKLNGT----IPESFARLADVDFIYLTGNLLTGKVPQWMF 132 (790)
Q Consensus 62 ~~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~g~----ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~ 132 (790)
.++|+.|+|++|.|++..+..+.. .++|++|+|++|++++. +|..+..+++|+.|+|++|++++..+..+.
T Consensus 283 ~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 362 (461)
T 1z7x_W 283 KESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC 362 (461)
T ss_dssp CTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHH
T ss_pred CCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHH
Confidence 145555566555555433332222 24556666666655543 445555556666666666666544333222
Q ss_pred ------CCCCcEEeccCCcccc----CCCCCCCCCCcceeeecCCC
Q 040908 133 ------GRGPENIDLSYNNFAD----ESSGSDCQNGAVNLFASSSK 168 (790)
Q Consensus 133 ------~~~L~~l~ls~N~l~g----~~p~~~~~~~~l~~~~~~~~ 168 (790)
.++|+.|+|++|++++ .+|..+..+++|+.++.+.+
T Consensus 363 ~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N 408 (461)
T 1z7x_W 363 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNN 408 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSS
T ss_pred HHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCC
Confidence 2356666666666654 45555555555666555443
No 391
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.21 E-value=6.4e-13 Score=149.92 Aligned_cols=166 Identities=14% Similarity=0.059 Sum_probs=77.5
Q ss_pred EEEccCCcCcc----cCChhhhcccccCcccccCcccccccc-----------ccccceeccccCCCCCCCc----cccc
Q 040908 2 YRTVQSNRLSG----ELPEELGSLIHSGKWFGWANSVWHYFS-----------ESLTDLRISDLNGPEATLP----DLRN 62 (790)
Q Consensus 2 ~L~Ls~N~l~g----~iP~~~~~L~~L~~L~l~~N~l~~~~~-----------~~L~~L~l~~n~~~~~~~~----~~~~ 62 (790)
+|+|++|+|+. .+|..|..+++|+.|+|++|.+....+ .+|+.|++++|.+...... .+..
T Consensus 89 ~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 168 (461)
T 1z7x_W 89 KLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRA 168 (461)
T ss_dssp EEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHH
T ss_pred EEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhh
Confidence 45555555552 345555555555555555555542111 1355555555544432211 1111
Q ss_pred -CcccEEEeccccccccCCcccc-----CCCCCCEEEccCCcCCcC----cchhccCCCCCcEEEeeCCcccccC-----
Q 040908 63 -RTFKNLILRSCNLTGELPHFLG-----EVSEMKVLDLSFNKLNGT----IPESFARLADVDFIYLTGNLLTGKV----- 127 (790)
Q Consensus 63 -~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~g~----ip~~~~~l~~L~~L~ls~N~l~g~~----- 127 (790)
++|+.|+|++|.+++..+..+. .+++|++|+|++|++++. +|..+..+++|+.|+|++|++++..
T Consensus 169 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~ 248 (461)
T 1z7x_W 169 KPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELC 248 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHH
T ss_pred CCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHH
Confidence 4555555555555543333332 234555555555555532 4555555555556666555554321
Q ss_pred CccccC-CCCcEEeccCCccccC----CCCCCCCCCcceeeecCC
Q 040908 128 PQWMFG-RGPENIDLSYNNFADE----SSGSDCQNGAVNLFASSS 167 (790)
Q Consensus 128 p~~~~~-~~L~~l~ls~N~l~g~----~p~~~~~~~~l~~~~~~~ 167 (790)
+..... ++|+.|+|++|+++.. ++..+..++.|+.++.+.
T Consensus 249 ~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~ 293 (461)
T 1z7x_W 249 PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAG 293 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTT
T ss_pred HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCC
Confidence 111111 4555666666655543 333343445555555543
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.15 E-value=1.2e-12 Score=130.36 Aligned_cols=123 Identities=15% Similarity=0.121 Sum_probs=100.2
Q ss_pred CEEEccCCcCcccCChhhhcccccCcccccCccccccccccccceeccccCCCCCCCcccccCcccEEEeccccccccCC
Q 040908 1 MYRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELP 80 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p 80 (790)
++|+|++|+|++ +| .+..+++|+.|++++|.++.. |..+..+ ++|+.|+|++|+|++ +|
T Consensus 51 ~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l-~~~~~~~-----------------~~L~~L~L~~N~l~~-l~ 109 (198)
T 1ds9_A 51 KHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKI-ENLDAVA-----------------DTLEELWISYNQIAS-LS 109 (198)
T ss_dssp SEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSC-SSHHHHH-----------------HHCSEEEEEEEECCC-HH
T ss_pred CEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccc-cchhhcC-----------------CcCCEEECcCCcCCc-CC
Confidence 579999999995 88 899999999999999988742 2222221 579999999999995 66
Q ss_pred ccccCCCCCCEEEccCCcCCcCcc--hhccCCCCCcEEEeeCCcccccCCcc----------ccC-CCCcEEeccCCccc
Q 040908 81 HFLGEVSEMKVLDLSFNKLNGTIP--ESFARLADVDFIYLTGNLLTGKVPQW----------MFG-RGPENIDLSYNNFA 147 (790)
Q Consensus 81 ~~~~~l~~L~~L~Ls~N~l~g~ip--~~~~~l~~L~~L~ls~N~l~g~~p~~----------~~~-~~L~~l~ls~N~l~ 147 (790)
.++++++|++|+|++|+++ .+| ..+..+++|+.|+|++|.+++.+|.. +.. ++|+.|| +|.++
T Consensus 110 -~~~~l~~L~~L~l~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 110 -GIEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp -HHHHHHHSSEEEESEEECC-CHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred -ccccCCCCCEEECCCCcCC-chhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 6899999999999999998 444 47999999999999999999887652 334 8899887 77776
Q ss_pred c
Q 040908 148 D 148 (790)
Q Consensus 148 g 148 (790)
.
T Consensus 186 ~ 186 (198)
T 1ds9_A 186 V 186 (198)
T ss_dssp T
T ss_pred H
Confidence 3
No 393
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.13 E-value=6.6e-11 Score=122.41 Aligned_cols=138 Identities=16% Similarity=0.124 Sum_probs=102.0
Q ss_pred hcCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCce--eeeeeEEEeCCeEEEEEE
Q 040908 445 TNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHL--VKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 445 ~~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~g~~~~~~~~~lV~E 522 (790)
...+.+....+.|..+.||++...+|+.+++|..... ....+..|+.+++.+.+.++ .++++++..++..++|||
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 3455554443456669999998777888999987543 22457789999999865554 558888888788999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcC------------------------------------
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEES------------------------------------ 566 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~------------------------------------ 566 (790)
|++|.+|. ... . ....++.++++.|+.||+..
T Consensus 96 ~i~G~~l~--~~~-------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 1nd4_A 96 EVPGQDLL--SSH-------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ 163 (264)
T ss_dssp CCSSEETT--TSC-------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred ecCCcccC--cCc-------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence 99998884 210 1 12357778888888888642
Q ss_pred -------------------CCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 567 -------------------RLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 567 -------------------~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
...++|+|++|.|||++++..+.|+|||.+.
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999887667799999876
No 394
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.08 E-value=8.7e-12 Score=136.64 Aligned_cols=148 Identities=12% Similarity=-0.013 Sum_probs=106.5
Q ss_pred CEEEccCCcCcccCChhhhcc-----cccCcccccCcccccccc-------ccccceeccccCCCCCCCccc------cc
Q 040908 1 MYRTVQSNRLSGELPEELGSL-----IHSGKWFGWANSVWHYFS-------ESLTDLRISDLNGPEATLPDL------RN 62 (790)
Q Consensus 1 ~~L~Ls~N~l~g~iP~~~~~L-----~~L~~L~l~~N~l~~~~~-------~~L~~L~l~~n~~~~~~~~~~------~~ 62 (790)
++|+|++|+|+..-...|..+ .+|+.|+|++|.++.... .+|+.|+|++|.+.......+ ..
T Consensus 75 ~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~ 154 (372)
T 3un9_A 75 RQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQ 154 (372)
T ss_dssp CEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTT
T ss_pred CEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcC
Confidence 478999999986555556554 689999999998863221 368888888887764433332 12
Q ss_pred CcccEEEeccccccc----cCCccccCCCCCCEEEccCCcCCc----CcchhccCCCCCcEEEeeCCcccccC----Ccc
Q 040908 63 RTFKNLILRSCNLTG----ELPHFLGEVSEMKVLDLSFNKLNG----TIPESFARLADVDFIYLTGNLLTGKV----PQW 130 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g----~ip~~~~~l~~L~~L~ls~N~l~g~~----p~~ 130 (790)
.+|+.|+|++|.|+. .++..+..+++|++|+|++|+|+. .++..+..+++|+.|+|++|.++..- +..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 678899999998874 345556778889999999998864 23566777888999999999887532 222
Q ss_pred ccC-CCCcEEeccCCcccc
Q 040908 131 MFG-RGPENIDLSYNNFAD 148 (790)
Q Consensus 131 ~~~-~~L~~l~ls~N~l~g 148 (790)
+.. ++|+.|||++|.|+.
T Consensus 235 L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHCSSCCEEECTTSSCCH
T ss_pred HHhCCCCCEEeccCCCCCH
Confidence 322 778899999998864
No 395
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.08 E-value=2.6e-10 Score=123.67 Aligned_cols=100 Identities=15% Similarity=0.085 Sum_probs=87.9
Q ss_pred EEEeccc-cccccCCccccCCCCCCEEEccC-CcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccC
Q 040908 67 NLILRSC-NLTGELPHFLGEVSEMKVLDLSF-NKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSY 143 (790)
Q Consensus 67 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~ 143 (790)
.++++++ +|+ .+|. |..+++|++|+|++ |+|++..|..|.+|++|+.|+|++|+|++.+|..|.. ++|+.|||++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4688988 898 6999 99999999999996 9999877789999999999999999999999988877 8999999999
Q ss_pred CccccCCCCCCCCCCcceeeecCCCC
Q 040908 144 NNFADESSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 144 N~l~g~~p~~~~~~~~l~~~~~~~~~ 169 (790)
|+|++..+..+..+. |..+....+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~ 114 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNP 114 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCC
Confidence 999987766666655 8888876553
No 396
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.00 E-value=9.1e-10 Score=118.51 Aligned_cols=98 Identities=11% Similarity=0.023 Sum_probs=51.9
Q ss_pred CcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCc-EEEeeCCcccccCCccccC-CCCcEEe
Q 040908 63 RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVD-FIYLTGNLLTGKVPQWMFG-RGPENID 140 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~-~L~ls~N~l~g~~p~~~~~-~~L~~l~ 140 (790)
++|+.|+|++|+++..-+..|.+|.+|+.|+|++| ++..-+..|.+|++|+ .|+|.+ +++..-+..|.. .+|+.|+
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 35556666655555333334555666666666555 4433334455666665 666655 444333444444 5566666
Q ss_pred ccCCccccCCCCCCCCCCccee
Q 040908 141 LSYNNFADESSGSDCQNGAVNL 162 (790)
Q Consensus 141 ls~N~l~g~~p~~~~~~~~l~~ 162 (790)
|+.|+++...+..|..+.+|+.
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ 325 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKL 325 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCE
T ss_pred eCCCccCccchhhhcCCcchhh
Confidence 6666655555555555554443
No 397
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.94 E-value=2.3e-09 Score=116.74 Aligned_cols=142 Identities=18% Similarity=0.257 Sum_probs=106.6
Q ss_pred eeeeecccCcEEEEeeeecCCcEEEEEEcc--ccc-hhcHHHHHHHHHHhhccC--CCceeeeeeEEEeC---CeEEEEE
Q 040908 450 VANKIGEGGFGPVYKGLLADGTLIAVKQLS--AKS-KQGNREFVNEIGTISALQ--HPHLVKLYGCCIEG---NQLLLIY 521 (790)
Q Consensus 450 ~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~--~~~-~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~---~~~~lV~ 521 (790)
..+.|+.|.++.||+....+ ..+++|+.. ... ......+.+|+.+++.+. +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 46789999999999998765 568888775 322 122346788999999986 45678889888766 4479999
Q ss_pred EeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcC-----------------------------------
Q 040908 522 EYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEES----------------------------------- 566 (790)
Q Consensus 522 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~----------------------------------- 566 (790)
||+++..+.+.. ...++...+..++.+++++|+.||+..
T Consensus 121 e~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 121 EFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp ECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 999998775422 124677888899999999999999731
Q ss_pred --------------------CCcEEeccCCCCcEEecCCCC--eEEeecCCccc
Q 040908 567 --------------------RLKIVHRDIKATNVLLDKDLN--PKISDFGLAKL 598 (790)
Q Consensus 567 --------------------~~~iiHrDlk~~NILl~~~~~--~kl~DFGla~~ 598 (790)
...++|+|+++.|||++.++. +.|.||+.+..
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999997753 68999998874
No 398
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.91 E-value=1.1e-09 Score=116.42 Aligned_cols=187 Identities=18% Similarity=0.217 Sum_probs=121.9
Q ss_pred eeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccC-CCc--eeeeeeEEEeCC---eEEEEEEec
Q 040908 451 ANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQ-HPH--LVKLYGCCIEGN---QLLLIYEYL 524 (790)
Q Consensus 451 ~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~g~~~~~~---~~~lV~Ey~ 524 (790)
.+.++.|....||+.. ..+++|+.... .....+.+|+.+|+.+. +.. +.+++......+ ..++|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999864 45888876432 33467889999998883 333 334444433332 348899999
Q ss_pred cCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhc---------------------------------------
Q 040908 525 ENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEE--------------------------------------- 565 (790)
Q Consensus 525 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~--------------------------------------- 565 (790)
+|.++.+... ..++..++..++.++++.|+.||+.
T Consensus 99 ~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 99 KGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 9988865431 2456667778888888888888851
Q ss_pred ----------------CCCcEEeccCCCCcEEecC--CCCeEEeecCCccccCCCCccee-------------eccccCC
Q 040908 566 ----------------SRLKIVHRDIKATNVLLDK--DLNPKISDFGLAKLDEEDNTHIS-------------TRVAGTF 614 (790)
Q Consensus 566 ----------------~~~~iiHrDlk~~NILl~~--~~~~kl~DFGla~~~~~~~~~~~-------------~~~~gt~ 614 (790)
..+.++|+|+++.||++++ +..+.|.||+.+...+....-.. ......+
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 1235899999999999998 45678999999875432110000 0000111
Q ss_pred Cccc-HHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCc
Q 040908 615 GYMA-PEYAMRGHLTDKADVYSFGIVALEIVSGRSNIM 651 (790)
Q Consensus 615 ~y~a-PE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~ 651 (790)
+... |+..... ....+.|+++.++|++.+|+.++.
T Consensus 253 ~~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 253 KHKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp TCSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHHH
Confidence 2222 3322211 123689999999999999987653
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.72 E-value=5.1e-10 Score=122.53 Aligned_cols=149 Identities=17% Similarity=0.099 Sum_probs=110.0
Q ss_pred ccccCcccccCccccccc-----------cccccceeccccCCCCCCCccccc--CcccEEEeccccccccCCccc----
Q 040908 21 LIHSGKWFGWANSVWHYF-----------SESLTDLRISDLNGPEATLPDLRN--RTFKNLILRSCNLTGELPHFL---- 83 (790)
Q Consensus 21 L~~L~~L~l~~N~l~~~~-----------~~~L~~L~l~~n~~~~~~~~~~~~--~~L~~L~L~~N~l~~~~p~~~---- 83 (790)
+++|+.|+|++|.++... +.+|+.|+|++|.+.......+.. .+|+.|+|++|+|+..-...+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 357999999999997321 258999999999876543333332 679999999999985544444
Q ss_pred -cCCCCCCEEEccCCcCCc----CcchhccCCCCCcEEEeeCCcccccC----CccccC-CCCcEEeccCCccccC----
Q 040908 84 -GEVSEMKVLDLSFNKLNG----TIPESFARLADVDFIYLTGNLLTGKV----PQWMFG-RGPENIDLSYNNFADE---- 149 (790)
Q Consensus 84 -~~l~~L~~L~Ls~N~l~g----~ip~~~~~l~~L~~L~ls~N~l~g~~----p~~~~~-~~L~~l~ls~N~l~g~---- 149 (790)
...++|++|+|++|+|+. .++..+..+++|+.|+|++|.|+..- +..+.. .+|+.|+|++|.|+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 356889999999999974 35566688999999999999998532 334444 7899999999999753
Q ss_pred CCCCCCCCCcceeeecCCCC
Q 040908 150 SSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 150 ~p~~~~~~~~l~~~~~~~~~ 169 (790)
++..+..++.|+.++.+.+.
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~ 250 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNE 250 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSS
T ss_pred HHHHHHhCCCCCEEeccCCC
Confidence 22333345678888876653
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.63 E-value=1.2e-09 Score=127.03 Aligned_cols=107 Identities=9% Similarity=0.014 Sum_probs=64.7
Q ss_pred CcccEEEeccccccccCCccccC-CCCCCEEEcc----CCcCCcC-----cchhccCCCCCcEEEeeCC--cccccCCcc
Q 040908 63 RTFKNLILRSCNLTGELPHFLGE-VSEMKVLDLS----FNKLNGT-----IPESFARLADVDFIYLTGN--LLTGKVPQW 130 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~g~-----ip~~~~~l~~L~~L~ls~N--~l~g~~p~~ 130 (790)
++|++|+|+.|++++..+..++. +++|+.|+|+ .|++++. ++..+.++++|+.|+|+++ .+++..+..
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 56777777777777666666654 7777777775 5666642 4444566777777777643 355444433
Q ss_pred ccC--CCCcEEeccCCccccC-CCCCCCCCCcceeeecCCCC
Q 040908 131 MFG--RGPENIDLSYNNFADE-SSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 131 ~~~--~~L~~l~ls~N~l~g~-~p~~~~~~~~l~~~~~~~~~ 169 (790)
+.. ++|+.|+|++|++++. ++..+..+++|+.++.+.+.
T Consensus 458 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~ 499 (592)
T 3ogk_B 458 IGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCC 499 (592)
T ss_dssp HHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCC
T ss_pred HHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCC
Confidence 322 5677777777777652 33333455666666665554
No 401
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.63 E-value=6.2e-08 Score=104.02 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=86.4
Q ss_pred ccccceeccccCCCCCCCccccc-CcccEEEeccccccccCCccccCCCCCC-EEEccCCcCCcCcchhccCCCCCcEEE
Q 040908 40 ESLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNLTGELPHFLGEVSEMK-VLDLSFNKLNGTIPESFARLADVDFIY 117 (790)
Q Consensus 40 ~~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~g~ip~~~~~l~~L~~L~ 117 (790)
.+|+.|++++|++...+...|.. .+|+.|+|.+| ++..-+..|.+|.+|+ .|+|.+ +++..-+..|.+|++|+.|+
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 47888899999999888888888 89999999998 7755566899999999 999999 78755568999999999999
Q ss_pred eeCCcccccCCccccC-CCCcEEec
Q 040908 118 LTGNLLTGKVPQWMFG-RGPENIDL 141 (790)
Q Consensus 118 ls~N~l~g~~p~~~~~-~~L~~l~l 141 (790)
|++|+++...+..|.. .+|+.|+.
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred eCCCccCccchhhhcCCcchhhhcc
Confidence 9999999777777777 78998864
No 402
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.58 E-value=1.1e-08 Score=118.83 Aligned_cols=147 Identities=11% Similarity=0.050 Sum_probs=97.9
Q ss_pred cccccCcccccCcccccc--------ccccccceeccccCCCC-CCCccc--ccCcccEEEecccccccc----CCcccc
Q 040908 20 SLIHSGKWFGWANSVWHY--------FSESLTDLRISDLNGPE-ATLPDL--RNRTFKNLILRSCNLTGE----LPHFLG 84 (790)
Q Consensus 20 ~L~~L~~L~l~~N~l~~~--------~~~~L~~L~l~~n~~~~-~~~~~~--~~~~L~~L~L~~N~l~~~----~p~~~~ 84 (790)
.+++|+.|+|++|.++.. .+.+|+.|+++++.... .....+ ..++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 678888888888877633 22348888887765311 111111 127788888888888765 444556
Q ss_pred CCCCCCEEEccCCcCC----cCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccc---cCCCCCCCC
Q 040908 85 EVSEMKVLDLSFNKLN----GTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFA---DESSGSDCQ 156 (790)
Q Consensus 85 ~l~~L~~L~Ls~N~l~----g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~---g~~p~~~~~ 156 (790)
++++|++|+|++|.++ +.++..+.++++|+.|+|++|.+.+ +|..+.. ++|+.|+++.+... +..+..+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 7888888888888887 3555666788888888888888876 5555555 77888888754332 233345555
Q ss_pred CCcceeeecCC
Q 040908 157 NGAVNLFASSS 167 (790)
Q Consensus 157 ~~~l~~~~~~~ 167 (790)
+.+|+.+..+.
T Consensus 269 ~~~L~~L~l~~ 279 (592)
T 3ogk_B 269 PRKLCRLGLSY 279 (592)
T ss_dssp CTTCCEEEETT
T ss_pred cccccccCccc
Confidence 66666665544
No 403
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.48 E-value=6.8e-07 Score=95.51 Aligned_cols=137 Identities=15% Similarity=0.157 Sum_probs=99.5
Q ss_pred CcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCC----CceeeeeeEEEeCCeEEEEEE
Q 040908 447 HFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQH----PHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 447 ~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~g~~~~~~~~~lV~E 522 (790)
.+...+.++.|....||+. |+.+++|+.... .....+..|..++..+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5556788999999999987 566888876432 223458899999988865 123444444 45689999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcC------------------------------------
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEES------------------------------------ 566 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~------------------------------------ 566 (790)
|++|.++.+... ..++..++..++.++++.|+.||+..
T Consensus 108 ~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 108 YIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp CCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 999988864331 23455666777777888877777432
Q ss_pred ------------------------CCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 567 ------------------------RLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 567 ------------------------~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
.+.++|+|++|.|||++.+..+.|.||+.+...
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 124699999999999999766799999998754
No 404
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.44 E-value=9.1e-07 Score=93.00 Aligned_cols=144 Identities=20% Similarity=0.211 Sum_probs=94.8
Q ss_pred cceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCC---ceeeeeeEEEeCCeEEEEEEec
Q 040908 448 FDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHP---HLVKLYGCCIEGNQLLLIYEYL 524 (790)
Q Consensus 448 y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~~~~~lV~Ey~ 524 (790)
....+.|+.|.++.||++...+|+.++||+...........|..|++.|+.+++. .+.+++++. ..++||||+
T Consensus 17 ~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred ccceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 3456789999999999999888999999997543333346789999999999865 467777663 358999999
Q ss_pred cCCChhh--------h---hcCCccc-----------------cCCCChhhHHH---H-----------------HHHHH
Q 040908 525 ENNSLAR--------A---LFGPEEH-----------------RLKLDWPTRHN---I-----------------CIGIA 556 (790)
Q Consensus 525 ~~gsL~~--------~---l~~~~~~-----------------~~~l~~~~~~~---i-----------------~~~ia 556 (790)
+++++.. . ||..... ...-+|..... + ...+-
T Consensus 93 ~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~ 172 (288)
T 3d1u_A 93 DERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVE 172 (288)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHH
T ss_pred ccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 9987531 1 2211100 00123432210 0 11111
Q ss_pred HHHHHhh----hcCCCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 557 RGLAYLH----EESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 557 ~aL~yLH----~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
+.++.|. ....+.++|+|+.+.||+++.+ .+.|.|| .+.
T Consensus 173 ~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 173 KVLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 2222232 2235679999999999999984 5889999 654
No 405
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.35 E-value=6.4e-08 Score=112.46 Aligned_cols=168 Identities=11% Similarity=-0.024 Sum_probs=104.8
Q ss_pred CEEEccCCcCccc-CChhhhcccccCcccc---------cCccccccc-------cccccceeccccCCCCCCCcccc--
Q 040908 1 MYRTVQSNRLSGE-LPEELGSLIHSGKWFG---------WANSVWHYF-------SESLTDLRISDLNGPEATLPDLR-- 61 (790)
Q Consensus 1 ~~L~Ls~N~l~g~-iP~~~~~L~~L~~L~l---------~~N~l~~~~-------~~~L~~L~l~~n~~~~~~~~~~~-- 61 (790)
++|+|++| ++.. ++.-...+++|+.|++ ..|.++... -.+|+.|.+..|.+.......+.
T Consensus 317 ~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~ 395 (594)
T 2p1m_B 317 QRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARN 395 (594)
T ss_dssp CEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred CEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhh
Confidence 46788877 4433 2222345788888877 334554221 23677777766666543333332
Q ss_pred cCcccEEEec--c----ccccc-----cCCccccCCCCCCEEEccCCcCCcCcchhccC-CCCCcEEEeeCCcccccCCc
Q 040908 62 NRTFKNLILR--S----CNLTG-----ELPHFLGEVSEMKVLDLSFNKLNGTIPESFAR-LADVDFIYLTGNLLTGKVPQ 129 (790)
Q Consensus 62 ~~~L~~L~L~--~----N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-l~~L~~L~ls~N~l~g~~p~ 129 (790)
.++|+.|+|+ + |++++ .++..+.++++|+.|+|++ ++++..+..++. +++|+.|+|++|.+++..+.
T Consensus 396 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~ 474 (594)
T 2p1m_B 396 RPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMH 474 (594)
T ss_dssp CTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHH
T ss_pred CCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHH
Confidence 2678888888 4 55652 1222256778888888876 666655666665 78888888888888765444
Q ss_pred cc-cC-CCCcEEeccCCccccCCCC-CCCCCCcceeeecCCCCC
Q 040908 130 WM-FG-RGPENIDLSYNNFADESSG-SDCQNGAVNLFASSSKGS 170 (790)
Q Consensus 130 ~~-~~-~~L~~l~ls~N~l~g~~p~-~~~~~~~l~~~~~~~~~~ 170 (790)
.+ .. ++|+.|+|++|++++.... .+..+++|+.++.+.+..
T Consensus 475 ~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 475 HVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 44 22 7788888888888654333 333466777777766543
No 406
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.34 E-value=4.1e-08 Score=114.07 Aligned_cols=116 Identities=10% Similarity=0.077 Sum_probs=53.3
Q ss_pred EEEccCCcCcccCChhhh-cccccCcccccCc-ccccc-c------cccccceeccccCCCCCCCcccc-----cCcccE
Q 040908 2 YRTVQSNRLSGELPEELG-SLIHSGKWFGWAN-SVWHY-F------SESLTDLRISDLNGPEATLPDLR-----NRTFKN 67 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~-~L~~L~~L~l~~N-~l~~~-~------~~~L~~L~l~~n~~~~~~~~~~~-----~~~L~~ 67 (790)
+|+|++|.+++..+..+. .+++|+.|+|++| .++.. + -.+|+.|++++|.+.......+. .++|+.
T Consensus 109 ~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~ 188 (594)
T 2p1m_B 109 EIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188 (594)
T ss_dssp EEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCE
T ss_pred eEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcE
Confidence 455566655555555554 4556666666555 33211 0 12555555555543332211111 145555
Q ss_pred EEecccc--ccc-cCCccccCCCCCCEEEccCC-cCCcCcchhccCCCCCcEEEe
Q 040908 68 LILRSCN--LTG-ELPHFLGEVSEMKVLDLSFN-KLNGTIPESFARLADVDFIYL 118 (790)
Q Consensus 68 L~L~~N~--l~~-~~p~~~~~l~~L~~L~Ls~N-~l~g~ip~~~~~l~~L~~L~l 118 (790)
|+|++|. ++. .++.-+.++++|++|+|++| .+. .+|..+.++++|+.|++
T Consensus 189 L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l 242 (594)
T 2p1m_B 189 LNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGT 242 (594)
T ss_dssp EECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEEC
T ss_pred EEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEccc
Confidence 5555554 111 01111233455666666555 233 25555555555555553
No 407
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.33 E-value=2.1e-06 Score=94.69 Aligned_cols=160 Identities=10% Similarity=0.010 Sum_probs=110.0
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCccccccccc-----cccceeccccCCCCCCCccccc-CcccEEEeccccc
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFSE-----SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCNL 75 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~~-----~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~l 75 (790)
.++|.+ .++..-+..|.+|.+|+.++|++|+++.+... +|+.+.+.+ ++.......|.. .+|+.|+|..| +
T Consensus 161 ~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l 237 (401)
T 4fdw_A 161 EIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-V 237 (401)
T ss_dssp EEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-C
T ss_pred EEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-c
Confidence 466664 66634445788899999999999888765543 677777764 355555566666 68888888875 5
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCccc-----ccCCccccC-CCCcEEeccCCccccC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLT-----GKVPQWMFG-RGPENIDLSYNNFADE 149 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~-----g~~p~~~~~-~~L~~l~ls~N~l~g~ 149 (790)
+..-...|.+ .+|+.+.| .|+++..-+..|.+|++|+.+++.+|.+. ...+..|.. .+|+.++|. |.++..
T Consensus 238 ~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I 314 (401)
T 4fdw_A 238 STIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRIL 314 (401)
T ss_dssp CEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEE
T ss_pred cCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEE
Confidence 5344456666 77888888 45566344567888888888888887765 233344544 778888888 457766
Q ss_pred CCCCCCCCCcceeeecCC
Q 040908 150 SSGSDCQNGAVNLFASSS 167 (790)
Q Consensus 150 ~p~~~~~~~~l~~~~~~~ 167 (790)
....|..+..|+.+...+
T Consensus 315 ~~~aF~~c~~L~~l~lp~ 332 (401)
T 4fdw_A 315 GQGLLGGNRKVTQLTIPA 332 (401)
T ss_dssp CTTTTTTCCSCCEEEECT
T ss_pred hhhhhcCCCCccEEEECc
Confidence 667777777777776643
No 408
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.30 E-value=4.5e-06 Score=88.54 Aligned_cols=137 Identities=16% Similarity=0.149 Sum_probs=93.4
Q ss_pred eeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCC---ceeeeeeEEE-eCCeEEEEEEeccC
Q 040908 451 ANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHP---HLVKLYGCCI-EGNQLLLIYEYLEN 526 (790)
Q Consensus 451 ~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~-~~~~~~lV~Ey~~~ 526 (790)
.+.++.|....||+. |..+++|+... ......+..|+.+|+.+.+. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 467888999999987 45678887432 23346788999999999653 3456666664 34557899999999
Q ss_pred CChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhc-----------------------------------------
Q 040908 527 NSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEE----------------------------------------- 565 (790)
Q Consensus 527 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~----------------------------------------- 565 (790)
..+.+... ..++...+..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 98 QILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp EECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred eECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 88866321 1223344444555555555555532
Q ss_pred ----------------CCCcEEeccCCCCcEEecC---CCCe-EEeecCCcccc
Q 040908 566 ----------------SRLKIVHRDIKATNVLLDK---DLNP-KISDFGLAKLD 599 (790)
Q Consensus 566 ----------------~~~~iiHrDlk~~NILl~~---~~~~-kl~DFGla~~~ 599 (790)
..+.++|+|+++.|||++. ++.+ .|.||+.+...
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2235799999999999987 4554 89999988743
No 409
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.25 E-value=8.9e-06 Score=84.25 Aligned_cols=140 Identities=15% Similarity=0.112 Sum_probs=98.4
Q ss_pred cCcceeeeecccCcE-EEEeeeec-CCcEEEEEEccccchhcHHHHHHHHHHhhccC-CCceeeeeeEEEeCCeEEEEEE
Q 040908 446 NHFDVANKIGEGGFG-PVYKGLLA-DGTLIAVKQLSAKSKQGNREFVNEIGTISALQ-HPHLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG-~Vy~g~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E 522 (790)
..|+. +.+..|..| .||+.... ++..+++|+-.. .....+.+|...|+.+. +--+.++++++.+.+..++|||
T Consensus 25 ~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme 100 (272)
T 4gkh_A 25 YGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTT 100 (272)
T ss_dssp TTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred cCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEE
Confidence 34443 455556655 68987754 456788887643 23456788999998884 3346778999999999999999
Q ss_pred eccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhc-------------------------------------
Q 040908 523 YLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEE------------------------------------- 565 (790)
Q Consensus 523 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~------------------------------------- 565 (790)
++++.++.+.... .......++.++++.|+.||..
T Consensus 101 ~l~G~~~~~~~~~--------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 101 AIPGKTAFQVLEE--------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp CCCSEEHHHHHHH--------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred eeCCccccccccC--------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 9999887765411 1123344566666666666642
Q ss_pred ------------------CCCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 566 ------------------SRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 566 ------------------~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
..+.++|+|+.+.|||+++++.+-|.||+.+.
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 11238999999999999988777799999876
No 410
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.24 E-value=4.6e-06 Score=91.94 Aligned_cols=159 Identities=9% Similarity=-0.002 Sum_probs=117.6
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCCCCCcccccCcccEEEeccccc
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNL 75 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l 75 (790)
.++|.+| ++..-...|.++ +|+.+.+.. .+..+.. .+|+.+.+.+|.+...+...|...+|+.+.|.+| +
T Consensus 139 ~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~-l 214 (401)
T 4fdw_A 139 KVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVT-L 214 (401)
T ss_dssp EEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTT-C
T ss_pred EEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeCCc-h
Confidence 4666665 763334467774 799999986 5553332 3788899999988888888888889999999855 7
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEeccCCccc-----cC
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDLSYNNFA-----DE 149 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~ls~N~l~-----g~ 149 (790)
+..-...|.+|++|+.|+|..| ++..-...|.+ .+|+.+.|. |.++..-+..|.. .+|+.++|.+|.+. ..
T Consensus 215 ~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I 291 (401)
T 4fdw_A 215 KEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMI 291 (401)
T ss_dssp CEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEE
T ss_pred heehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEE
Confidence 7455668899999999999875 66344456777 789999994 5566555666666 89999999998875 34
Q ss_pred CCCCCCCCCcceeeecCC
Q 040908 150 SSGSDCQNGAVNLFASSS 167 (790)
Q Consensus 150 ~p~~~~~~~~l~~~~~~~ 167 (790)
.+..|..+.+|+.+...+
T Consensus 292 ~~~aF~~c~~L~~l~l~~ 309 (401)
T 4fdw_A 292 HPYCLEGCPKLARFEIPE 309 (401)
T ss_dssp CTTTTTTCTTCCEECCCT
T ss_pred CHHHhhCCccCCeEEeCC
Confidence 567788888888887653
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.23 E-value=1.9e-07 Score=96.54 Aligned_cols=82 Identities=18% Similarity=0.194 Sum_probs=58.7
Q ss_pred EEecccccc---ccCCccccCCCCCCEEEccCCcCCc--CcchhccCCCCCcEEEeeCCcccccCCccccC---CCCcEE
Q 040908 68 LILRSCNLT---GELPHFLGEVSEMKVLDLSFNKLNG--TIPESFARLADVDFIYLTGNLLTGKVPQWMFG---RGPENI 139 (790)
Q Consensus 68 L~L~~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~g--~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~---~~L~~l 139 (790)
++++.|+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+.. .+|+.|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 667777433 2222233567888999999999887 5567778888899999999988865 12222 278889
Q ss_pred eccCCccccCCC
Q 040908 140 DLSYNNFADESS 151 (790)
Q Consensus 140 ~ls~N~l~g~~p 151 (790)
+|++|++++.+|
T Consensus 226 ~L~~Npl~~~~~ 237 (267)
T 3rw6_A 226 WLDGNSLCDTFR 237 (267)
T ss_dssp ECTTSTTGGGCS
T ss_pred EccCCcCccccC
Confidence 999999887666
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.17 E-value=7.6e-07 Score=96.64 Aligned_cols=154 Identities=14% Similarity=0.081 Sum_probs=101.3
Q ss_pred CChhhhcccccCcccccCcccc-------------cc--ccccccceeccccCCCCCCCcccccCcccEEEecccccccc
Q 040908 14 LPEELGSLIHSGKWFGWANSVW-------------HY--FSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGE 78 (790)
Q Consensus 14 iP~~~~~L~~L~~L~l~~N~l~-------------~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~ 78 (790)
+...+.++++|+.|.+..+... .. .+.+|+.|++..+..... +.+...+|+.|+|..|.++..
T Consensus 131 L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~l--~~~~~~~L~~L~L~~~~l~~~ 208 (362)
T 2ra8_A 131 IVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLSI--GKKPRPNLKSLEIISGGLPDS 208 (362)
T ss_dssp HHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCBC--CSCBCTTCSEEEEECSBCCHH
T ss_pred HHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCcee--ccccCCCCcEEEEecCCCChH
Confidence 3445677888888888655321 11 124899999877632222 224458899999999888754
Q ss_pred CCcccc--CCCCCCEEEccC--CcCCcC-----cchhc--cCCCCCcEEEeeCCcccccCCcccc----CCCCcEEeccC
Q 040908 79 LPHFLG--EVSEMKVLDLSF--NKLNGT-----IPESF--ARLADVDFIYLTGNLLTGKVPQWMF----GRGPENIDLSY 143 (790)
Q Consensus 79 ~p~~~~--~l~~L~~L~Ls~--N~l~g~-----ip~~~--~~l~~L~~L~ls~N~l~g~~p~~~~----~~~L~~l~ls~ 143 (790)
.-..++ .+++|+.|+|+. |...|. +...+ ..+++|+.|+|++|.+....+..+. .++|+.|||+.
T Consensus 209 ~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~ 288 (362)
T 2ra8_A 209 VVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISA 288 (362)
T ss_dssp HHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCS
T ss_pred HHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCC
Confidence 444454 789999999864 332221 11122 3578999999999998754443332 26899999999
Q ss_pred CccccC----CCCCCCCCCcceeeecCCCC
Q 040908 144 NNFADE----SSGSDCQNGAVNLFASSSKG 169 (790)
Q Consensus 144 N~l~g~----~p~~~~~~~~l~~~~~~~~~ 169 (790)
|.|+.. ++..+..++.|+.++.+.+.
T Consensus 289 n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 289 GVLTDEGARLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp SCCBHHHHHHHHTTHHHHTTCSEEECCSBB
T ss_pred CCCChHHHHHHHhhcccCCcceEEECCCCc
Confidence 999874 34444456778888886553
No 413
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.16 E-value=1.1e-05 Score=87.67 Aligned_cols=146 Identities=12% Similarity=0.115 Sum_probs=91.4
Q ss_pred cceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCc--eeeeeeEEEeC-CeEEEEEEec
Q 040908 448 FDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPH--LVKLYGCCIEG-NQLLLIYEYL 524 (790)
Q Consensus 448 y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~-~~~~lV~Ey~ 524 (790)
....+.++.|....+|+... +|..+++|..... ..+..|+.++..+.... +.++++++... +..++||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 33467899999999999876 5788899987432 25788999998886543 45677776654 5689999999
Q ss_pred cCCChhhh------------------hcCCcccc-------------CCCChhhH---------------------HHHH
Q 040908 525 ENNSLARA------------------LFGPEEHR-------------LKLDWPTR---------------------HNIC 552 (790)
Q Consensus 525 ~~gsL~~~------------------l~~~~~~~-------------~~l~~~~~---------------------~~i~ 552 (790)
++.++.+. ||...... ..-.|... ....
T Consensus 117 ~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 196 (362)
T 3ovc_A 117 QGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVA 196 (362)
T ss_dssp CSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccch
Confidence 98766421 01100000 00011111 0111
Q ss_pred HHHHHHHHHhhhc-CCCcEEeccCCCCcEEecCCCCeEEeecCCcccc
Q 040908 553 IGIARGLAYLHEE-SRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 599 (790)
Q Consensus 553 ~~ia~aL~yLH~~-~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~ 599 (790)
..+...++++... ..+.++|+|+++.|||++++..+.|.||+.+..-
T Consensus 197 ~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 197 QALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 1122222233211 1246899999999999988777889999988753
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.16 E-value=1e-06 Score=90.97 Aligned_cols=76 Identities=18% Similarity=0.289 Sum_probs=62.7
Q ss_pred CcccEEEeccccccc--cCCccccCCCCCCEEEccCCcCCcCcchhccCCC--CCcEEEeeCCcccccCCc-------cc
Q 040908 63 RTFKNLILRSCNLTG--ELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLA--DVDFIYLTGNLLTGKVPQ-------WM 131 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~--~L~~L~ls~N~l~g~~p~-------~~ 131 (790)
++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+.+.+|. .+
T Consensus 170 ~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il 247 (267)
T 3rw6_A 170 PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIR 247 (267)
T ss_dssp TTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHH
T ss_pred CCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHH
Confidence 689999999999998 6678888999999999999999964 3455555 999999999999988773 12
Q ss_pred cC-CCCcEEe
Q 040908 132 FG-RGPENID 140 (790)
Q Consensus 132 ~~-~~L~~l~ 140 (790)
.. ++|+.||
T Consensus 248 ~~~P~L~~LD 257 (267)
T 3rw6_A 248 ERFPKLLRLD 257 (267)
T ss_dssp HHCTTCCEES
T ss_pred HHCcccCeEC
Confidence 33 7788776
No 415
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.13 E-value=4.4e-06 Score=90.51 Aligned_cols=82 Identities=9% Similarity=0.024 Sum_probs=57.2
Q ss_pred eeeee-cccCcEEEEeeeec-------CCcEEEEEEccccc---hhcHHHHHHHHHHhhccC-C--CceeeeeeEEEeC-
Q 040908 450 VANKI-GEGGFGPVYKGLLA-------DGTLIAVKQLSAKS---KQGNREFVNEIGTISALQ-H--PHLVKLYGCCIEG- 514 (790)
Q Consensus 450 ~~~~L-G~G~fG~Vy~g~~~-------~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~-H--~niv~l~g~~~~~- 514 (790)
..+.| +.|....+|+.... ++..+++|+..... ......+..|+.+++.+. + -.+.++++++.+.
T Consensus 24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 34677 88889999998764 26678888865432 101245678888888884 3 3466788877655
Q ss_pred --CeEEEEEEeccCCChhh
Q 040908 515 --NQLLLIYEYLENNSLAR 531 (790)
Q Consensus 515 --~~~~lV~Ey~~~gsL~~ 531 (790)
+..++||||++|..+.+
T Consensus 104 ~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TTSSCEEEEECCCCBCCCB
T ss_pred ccCCceEEEEecCCCChhh
Confidence 34689999999877654
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.13 E-value=4e-07 Score=89.11 Aligned_cols=117 Identities=10% Similarity=0.039 Sum_probs=79.1
Q ss_pred hhhcccccCcccccCc-cccccccccccceeccccCCCCCCCcccc-cCcccEEEecccccccc----CCccccCCCCCC
Q 040908 17 ELGSLIHSGKWFGWAN-SVWHYFSESLTDLRISDLNGPEATLPDLR-NRTFKNLILRSCNLTGE----LPHFLGEVSEMK 90 (790)
Q Consensus 17 ~~~~L~~L~~L~l~~N-~l~~~~~~~L~~L~l~~n~~~~~~~~~~~-~~~L~~L~L~~N~l~~~----~p~~~~~l~~L~ 90 (790)
.+...++|+.|+|++| .+...-...|.. .+. .++|++|+|++|+|... +...+...+.|+
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~--------------~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~ 96 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAE--------------ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLK 96 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHH--------------HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCC
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHH--------------HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcC
Confidence 3445567777777777 665321111111 111 15788999999998742 445566668899
Q ss_pred EEEccCCcCCcC----cchhccCCCCCcEEEe--eCCcccccC----CccccC-CCCcEEeccCCccc
Q 040908 91 VLDLSFNKLNGT----IPESFARLADVDFIYL--TGNLLTGKV----PQWMFG-RGPENIDLSYNNFA 147 (790)
Q Consensus 91 ~L~Ls~N~l~g~----ip~~~~~l~~L~~L~l--s~N~l~g~~----p~~~~~-~~L~~l~ls~N~l~ 147 (790)
+|+|++|+|... +...+...++|+.|+| ++|.+...- ...+.. .+|+.|+|++|.+.
T Consensus 97 ~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 97 SLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp EEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred EEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 999999998743 5667788888999999 889887542 222333 78999999999875
No 417
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.08 E-value=1.2e-06 Score=95.05 Aligned_cols=134 Identities=14% Similarity=0.170 Sum_probs=64.4
Q ss_pred CChhhhcccccCcccccCcc-cc--ccccccccceeccccCCCCCCCcccc---cCcccEEEecc--cccccc-----CC
Q 040908 14 LPEELGSLIHSGKWFGWANS-VW--HYFSESLTDLRISDLNGPEATLPDLR---NRTFKNLILRS--CNLTGE-----LP 80 (790)
Q Consensus 14 iP~~~~~L~~L~~L~l~~N~-l~--~~~~~~L~~L~l~~n~~~~~~~~~~~---~~~L~~L~L~~--N~l~~~-----~p 80 (790)
++..+..+++|+.|+|++|. +. .....+|+.|++..+.+.......+. .++|+.|+|+. |...+. +.
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l~l~~~~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~ 243 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFR 243 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTCBCCSCBCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTG
T ss_pred HHHHHhcCCCCcEEEEeCCCCceeccccCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHH
Confidence 44445555666666666652 11 11123566666655554322222221 25666666642 221111 11
Q ss_pred ccc--cCCCCCCEEEccCCcCCcCcchhcc---CCCCCcEEEeeCCccccc----CCccccC-CCCcEEeccCCccc
Q 040908 81 HFL--GEVSEMKVLDLSFNKLNGTIPESFA---RLADVDFIYLTGNLLTGK----VPQWMFG-RGPENIDLSYNNFA 147 (790)
Q Consensus 81 ~~~--~~l~~L~~L~Ls~N~l~g~ip~~~~---~l~~L~~L~ls~N~l~g~----~p~~~~~-~~L~~l~ls~N~l~ 147 (790)
..+ ..+++|++|+|++|.+....+..+. .+++|+.|+|+.|.+.+. ++..+.. ++|+.|+|++|.|+
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 112 2356666666666666543333332 355666666666666542 2222222 56666666666654
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.04 E-value=9.1e-07 Score=86.55 Aligned_cols=111 Identities=14% Similarity=0.026 Sum_probs=81.0
Q ss_pred CEEEccCC-cCccc----CChhhhcccccCcccccCccccccccccccceeccccCCCCCCCcccccCcccEEEeccccc
Q 040908 1 MYRTVQSN-RLSGE----LPEELGSLIHSGKWFGWANSVWHYFSESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNL 75 (790)
Q Consensus 1 ~~L~Ls~N-~l~g~----iP~~~~~L~~L~~L~l~~N~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l 75 (790)
++|+|++| +|... +...+...++|++|+|++|.|...-...|... .-.+++|++|+|++|.|
T Consensus 39 ~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~-------------L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 39 EEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEM-------------LKVNNTLKSLNVESNFI 105 (185)
T ss_dssp CEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHH-------------HHHCSSCCEEECCSSCC
T ss_pred CEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHH-------------HHhCCCcCEEECcCCcC
Confidence 47999999 99743 34455566889999999998864222111110 00115799999999999
Q ss_pred ccc----CCccccCCCCCCEEEc--cCCcCCcC----cchhccCCCCCcEEEeeCCccc
Q 040908 76 TGE----LPHFLGEVSEMKVLDL--SFNKLNGT----IPESFARLADVDFIYLTGNLLT 124 (790)
Q Consensus 76 ~~~----~p~~~~~l~~L~~L~L--s~N~l~g~----ip~~~~~l~~L~~L~ls~N~l~ 124 (790)
... +...+...+.|++|+| ++|.|... +...+...++|+.|+|++|.+.
T Consensus 106 ~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 106 SGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred CHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 854 5677888899999999 88999743 4456667799999999999885
No 419
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.87 E-value=5.6e-05 Score=80.86 Aligned_cols=142 Identities=15% Similarity=0.216 Sum_probs=81.0
Q ss_pred eeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCC--Cceeeeee------EEEeCCeEEEEEE
Q 040908 451 ANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQH--PHLVKLYG------CCIEGNQLLLIYE 522 (790)
Q Consensus 451 ~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g------~~~~~~~~~lV~E 522 (790)
.+.|+.|..+.||+....+| .+++|+.... ...+..|+.++..+.. -.+.+++. +....+..+++||
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 35566677889999987655 4888988642 2333445555555531 12333433 2234667899999
Q ss_pred eccCCChh-----------h---hhcCCcc----c------cCCCChhhHH-----------------------------
Q 040908 523 YLENNSLA-----------R---ALFGPEE----H------RLKLDWPTRH----------------------------- 549 (790)
Q Consensus 523 y~~~gsL~-----------~---~l~~~~~----~------~~~l~~~~~~----------------------------- 549 (790)
|++|..+. + .+|.... . ...-.|....
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986543 0 1111000 0 0012332211
Q ss_pred --HHHHHHHHHHHHhhh----------cCCCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 550 --NICIGIARGLAYLHE----------ESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 550 --~i~~~ia~aL~yLH~----------~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
.+...+.+++++|+. .....++|+|+++.|||++.++.+.|.||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111123445666763 124579999999999999888899999999765
No 420
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.81 E-value=0.00011 Score=76.98 Aligned_cols=80 Identities=20% Similarity=0.197 Sum_probs=58.7
Q ss_pred cCcceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCC---ceeeeeeEEEeCCeEEEEEE
Q 040908 446 NHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHP---HLVKLYGCCIEGNQLLLIYE 522 (790)
Q Consensus 446 ~~y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~~~~~lV~E 522 (790)
....-++.+|.|..+.||+..+.||+.|++|+...........|..|+..|+.+.-. -+.+++++. .-++|||
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e 90 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence 345667889999999999999999999999987654444445678899999888422 234445432 2378999
Q ss_pred eccCCCh
Q 040908 523 YLENNSL 529 (790)
Q Consensus 523 y~~~gsL 529 (790)
|++.+..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9987654
No 421
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.80 E-value=6.6e-05 Score=82.48 Aligned_cols=75 Identities=19% Similarity=0.246 Sum_probs=49.4
Q ss_pred eeeecccCcEEEEeeeec-CCcEEEEEEccccch-------hcHHHHHHHHHHhhccCC--Ccee-eeeeEEEeCCeEEE
Q 040908 451 ANKIGEGGFGPVYKGLLA-DGTLIAVKQLSAKSK-------QGNREFVNEIGTISALQH--PHLV-KLYGCCIEGNQLLL 519 (790)
Q Consensus 451 ~~~LG~G~fG~Vy~g~~~-~g~~vAvK~~~~~~~-------~~~~~~~~E~~~l~~l~H--~niv-~l~g~~~~~~~~~l 519 (790)
.+.||.|..+.||++... +++.++||....... .....+..|.++++.+.. +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 578999999999999754 467899997643211 123456778888887742 3444 45543 3445689
Q ss_pred EEEeccCC
Q 040908 520 IYEYLENN 527 (790)
Q Consensus 520 V~Ey~~~g 527 (790)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 422
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.73 E-value=0.0002 Score=75.75 Aligned_cols=140 Identities=15% Similarity=0.136 Sum_probs=92.8
Q ss_pred eeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccC---CCceeeeeeEEEeCCeEEEEEEeccC
Q 040908 450 VANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQ---HPHLVKLYGCCIEGNQLLLIYEYLEN 526 (790)
Q Consensus 450 ~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~Ey~~~ 526 (790)
..+.|+.|....+|+... ++..+++|+.... ....|..|+..|+.+. ...+.++++++...+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 457899999999999886 4567888886532 3456888999998884 35678889888888889999999999
Q ss_pred CChhh-----------hhcCCcc-c-----------------cCCCChhhHH---HHHH----------------HHHHH
Q 040908 527 NSLAR-----------ALFGPEE-H-----------------RLKLDWPTRH---NICI----------------GIARG 558 (790)
Q Consensus 527 gsL~~-----------~l~~~~~-~-----------------~~~l~~~~~~---~i~~----------------~ia~a 558 (790)
..+.. .||.... . ...-+|.... ++.. .+++.
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 86531 1221110 0 0012454321 1111 11111
Q ss_pred -HHHhhh-cCCCcEEeccCCCCcEEecCCCCeEEeecC
Q 040908 559 -LAYLHE-ESRLKIVHRDIKATNVLLDKDLNPKISDFG 594 (790)
Q Consensus 559 -L~yLH~-~~~~~iiHrDlk~~NILl~~~~~~kl~DFG 594 (790)
...|.. ...+.++|+|+.+.||+++.++ +.|.||.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 123321 2356799999999999999887 8899984
No 423
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.37 E-value=0.00081 Score=71.23 Aligned_cols=159 Identities=16% Similarity=0.153 Sum_probs=88.4
Q ss_pred ccHHHHHHHhcCcce-----eeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCc--eeeee
Q 040908 436 FTLRQIKAATNHFDV-----ANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPH--LVKLY 508 (790)
Q Consensus 436 ~~~~~~~~~~~~y~~-----~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~ 508 (790)
++.+++...-..|.+ .+.|+.|....+|+....+| .+++|...... ....+..|+.++..+...+ +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 455566665555654 35577788899999987666 57788876421 1234556777777764222 23333
Q ss_pred eE------EEeCCeEEEEEEeccCCChhh--------------hhcCC----cccc----CCCChhhHHH----------
Q 040908 509 GC------CIEGNQLLLIYEYLENNSLAR--------------ALFGP----EEHR----LKLDWPTRHN---------- 550 (790)
Q Consensus 509 g~------~~~~~~~~lV~Ey~~~gsL~~--------------~l~~~----~~~~----~~l~~~~~~~---------- 550 (790)
.. ....+..+++|+|++|..+.. .+|.. .... ....|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 123456789999999865421 01110 0000 0012322111
Q ss_pred --HHHHHHHHHHHhhhc----CCCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 551 --ICIGIARGLAYLHEE----SRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 551 --i~~~ia~aL~yLH~~----~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
+...+.+.+++++.. ....++|+|+.+.|||++++..+.|.||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011234445555432 23469999999999999987656899998765
No 424
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.33 E-value=0.00056 Score=75.67 Aligned_cols=78 Identities=9% Similarity=0.070 Sum_probs=47.6
Q ss_pred CCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCCcceeecc-ccCCCcccHHHhhcCC---CCChhhHHHHHHHHHH
Q 040908 567 RLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRV-AGTFGYMAPEYAMRGH---LTDKADVYSFGIVALE 642 (790)
Q Consensus 567 ~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~---~s~ksDV~S~Gvvl~e 642 (790)
...++|+|+++.|||++.++ ++|.||+.+........- .... .-...|++|+...... .....++......+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI-GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH-HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH-HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 45699999999999999876 999999988753321100 0000 0012456665543111 1123556678888888
Q ss_pred HHhC
Q 040908 643 IVSG 646 (790)
Q Consensus 643 lltG 646 (790)
.+++
T Consensus 309 ~y~~ 312 (420)
T 2pyw_A 309 LFNK 312 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 425
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.16 E-value=0.00082 Score=74.54 Aligned_cols=73 Identities=21% Similarity=0.264 Sum_probs=50.5
Q ss_pred eeeecccCcEEEEeeeecC--------CcEEEEEEccccchhcHHHHHHHHHHhhccCCCce-eeeeeEEEeCCeEEEEE
Q 040908 451 ANKIGEGGFGPVYKGLLAD--------GTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHL-VKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 451 ~~~LG~G~fG~Vy~g~~~~--------g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~ 521 (790)
.+.|+.|....||+....+ +..+++|+.... .....+..|..+++.+...++ .++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4678888889999998653 478889987432 112456689999988854444 556665532 2899
Q ss_pred EeccCCCh
Q 040908 522 EYLENNSL 529 (790)
Q Consensus 522 Ey~~~gsL 529 (790)
||+++.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986444
No 426
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.97 E-value=0.002 Score=69.99 Aligned_cols=142 Identities=20% Similarity=0.246 Sum_probs=82.5
Q ss_pred eeeecccCcEEEEeeeec--------CCcEEEEEEccccchhcHHHHHHHHHHhhccCCCce-eeeeeEEEeCCeEEEEE
Q 040908 451 ANKIGEGGFGPVYKGLLA--------DGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHL-VKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 451 ~~~LG~G~fG~Vy~g~~~--------~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~ 521 (790)
.+.|..|-...+|+.... +++.+++|+.... ......+.+|..+++.+.-.++ .++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 356777888889998864 2468999986432 2234566789999988853333 456666543 2899
Q ss_pred EeccCCChhhh-----------------hcCCcc-ccCCCC--hhhHHHHHHHHHH-------------------HHHHh
Q 040908 522 EYLENNSLARA-----------------LFGPEE-HRLKLD--WPTRHNICIGIAR-------------------GLAYL 562 (790)
Q Consensus 522 Ey~~~gsL~~~-----------------l~~~~~-~~~~l~--~~~~~~i~~~ia~-------------------aL~yL 562 (790)
||++|.+|..- ||.... ...... |.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998665421 121100 011122 3444444433321 22333
Q ss_pred h----h-cCCCcEEeccCCCCcEEecCC----CCeEEeecCCcc
Q 040908 563 H----E-ESRLKIVHRDIKATNVLLDKD----LNPKISDFGLAK 597 (790)
Q Consensus 563 H----~-~~~~~iiHrDlk~~NILl~~~----~~~kl~DFGla~ 597 (790)
. . .....++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2 1 123468999999999999887 789999998775
No 427
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.94 E-value=0.009 Score=63.24 Aligned_cols=159 Identities=13% Similarity=0.092 Sum_probs=88.5
Q ss_pred ccHHHHHHHhcCcce-----eeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCc--eeeee
Q 040908 436 FTLRQIKAATNHFDV-----ANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPH--LVKLY 508 (790)
Q Consensus 436 ~~~~~~~~~~~~y~~-----~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~ 508 (790)
.+.+++..+-+.|.+ ...++ |....||+....+|+.+++|...... .....+..|..++..+.... +.+++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~ 88 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPV 88 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeeccee
Confidence 344445444333322 34576 78889999887778789999875321 22345667888887774222 34444
Q ss_pred eE-----EEeCCeEEEEEEeccCCChhh-----------h---hcCC----c-cccCCCChhhH----HH----------
Q 040908 509 GC-----CIEGNQLLLIYEYLENNSLAR-----------A---LFGP----E-EHRLKLDWPTR----HN---------- 550 (790)
Q Consensus 509 g~-----~~~~~~~~lV~Ey~~~gsL~~-----------~---l~~~----~-~~~~~l~~~~~----~~---------- 550 (790)
.. ....+..+++|||++|..+.. . +|.. . ......++... ..
T Consensus 89 ~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (328)
T 1zyl_A 89 AFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPS 168 (328)
T ss_dssp CBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCT
T ss_pred ecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCH
Confidence 43 223456788999999865421 0 1110 0 00111222111 00
Q ss_pred -----HHHHHHHHHHHhhh----cCCCcEEeccCCCCcEEecCCCCeEEeecCCccc
Q 040908 551 -----ICIGIARGLAYLHE----ESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 598 (790)
Q Consensus 551 -----i~~~ia~aL~yLH~----~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~ 598 (790)
+...+.+.++.+.. .....++|+|+++.|||++ + .+.|.||+.+..
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 169 GLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 01111122223221 1234589999999999999 4 899999988763
No 428
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.93 E-value=0.0035 Score=66.69 Aligned_cols=144 Identities=17% Similarity=0.138 Sum_probs=73.3
Q ss_pred eeeecccCcEE-EEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCC--CceeeeeeEEEeCCeEEEEEEeccCC
Q 040908 451 ANKIGEGGFGP-VYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQH--PHLVKLYGCCIEGNQLLLIYEYLENN 527 (790)
Q Consensus 451 ~~~LG~G~fG~-Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV~Ey~~~g 527 (790)
.+.|+.|+... +|+....+|..+++|....... ..+..|+.++..+.. -.+.+++.+..+.+ +++||++.+.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~ 97 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA 97 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence 34566665444 6677654466777776543211 233456777766642 23455666644333 6899999876
Q ss_pred ChhhhhcCCcc---------------------cc-CCCChhhHH-------H-------------HHHHHHHHHHHhh--
Q 040908 528 SLARALFGPEE---------------------HR-LKLDWPTRH-------N-------------ICIGIARGLAYLH-- 563 (790)
Q Consensus 528 sL~~~l~~~~~---------------------~~-~~l~~~~~~-------~-------------i~~~ia~aL~yLH-- 563 (790)
.+.+++.+... .. ..++..... . ....+.+.++.+.
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 66544321100 00 001110000 0 0001112222221
Q ss_pred -hcCCCcEEeccCCCCcEEecCC----CCeEEeecCCcccc
Q 040908 564 -EESRLKIVHRDIKATNVLLDKD----LNPKISDFGLAKLD 599 (790)
Q Consensus 564 -~~~~~~iiHrDlk~~NILl~~~----~~~kl~DFGla~~~ 599 (790)
......++|+|+.+.|||++.+ ..+.|.||+.+...
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1123469999999999999875 67899999988743
No 429
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.89 E-value=0.002 Score=67.55 Aligned_cols=71 Identities=7% Similarity=0.051 Sum_probs=44.3
Q ss_pred eeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCce-eeeeeEEEeCCeEEEEEEec-cCCC
Q 040908 451 ANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHL-VKLYGCCIEGNQLLLIYEYL-ENNS 528 (790)
Q Consensus 451 ~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~-~~gs 528 (790)
.+.|+.|....+|+. ..+++|+....... ......|+.+++.+...++ .++++++ .+.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 578999999999998 45788877543211 1123468888877753334 3555443 33347899999 5544
Q ss_pred h
Q 040908 529 L 529 (790)
Q Consensus 529 L 529 (790)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.63 E-value=0.0025 Score=57.98 Aligned_cols=56 Identities=21% Similarity=0.142 Sum_probs=34.5
Q ss_pred EEEecccccc-ccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCccc
Q 040908 67 NLILRSCNLT-GELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLT 124 (790)
Q Consensus 67 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~ 124 (790)
.++.+++.|+ ..+|..+. .+|++|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666677665 35565432 45777777777776433445666777777777766553
No 431
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.62 E-value=0.0083 Score=66.83 Aligned_cols=74 Identities=16% Similarity=0.084 Sum_probs=48.3
Q ss_pred eeeecccCcEEEEeeeecC-CcEEEEEEccccchhcHHHHHHHHHHhhccCCCce-eeeeeEEEeCCeEEEEEEeccCCC
Q 040908 451 ANKIGEGGFGPVYKGLLAD-GTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHL-VKLYGCCIEGNQLLLIYEYLENNS 528 (790)
Q Consensus 451 ~~~LG~G~fG~Vy~g~~~~-g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~~~gs 528 (790)
.+.|+.|-...+|+....+ +..+++|+....... ...-..|..++..+...++ .++++++. + .+||||+++.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 4678888889999998765 477888887433211 1112478888888865555 45676663 2 25999999855
Q ss_pred h
Q 040908 529 L 529 (790)
Q Consensus 529 L 529 (790)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 432
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.60 E-value=0.001 Score=63.76 Aligned_cols=83 Identities=10% Similarity=-0.030 Sum_probs=56.8
Q ss_pred CcccEEEeccccccccCCccccCCCCCCEEEccCCc-CCcCcchhccCC----CCCcEEEeeCCc-ccccCCccccC-CC
Q 040908 63 RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNK-LNGTIPESFARL----ADVDFIYLTGNL-LTGKVPQWMFG-RG 135 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~g~ip~~~~~l----~~L~~L~ls~N~-l~g~~p~~~~~-~~ 135 (790)
..|+.|||+++.|+..-=..+.+|++|++|+|+++. ++..-=..++.+ ++|+.|+|+++. ++..-=..+.. ++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468899999988876544567788899999999885 653322345554 368899998874 65321122333 78
Q ss_pred CcEEeccCCc
Q 040908 136 PENIDLSYNN 145 (790)
Q Consensus 136 L~~l~ls~N~ 145 (790)
|+.|+|++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888888764
No 433
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.55 E-value=0.0036 Score=67.72 Aligned_cols=74 Identities=14% Similarity=0.150 Sum_probs=44.7
Q ss_pred eeeecccCcEEEEeeeecC---------CcEEEEEEccccchhcHHHHHHHHHHhhccCCCce-eeeeeEEEeCCeEEEE
Q 040908 451 ANKIGEGGFGPVYKGLLAD---------GTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHL-VKLYGCCIEGNQLLLI 520 (790)
Q Consensus 451 ~~~LG~G~fG~Vy~g~~~~---------g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV 520 (790)
.+.|+.|..-.+|+....+ +..+++|+....... ......|..+++.+...++ .++++.. .+ ++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--NG--GRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--CC--cEE
Confidence 4577888888999988654 267888887543221 1123578888888754444 3566543 22 689
Q ss_pred EEeccCCCh
Q 040908 521 YEYLENNSL 529 (790)
Q Consensus 521 ~Ey~~~gsL 529 (790)
|||+++..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999997544
No 434
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.31 E-value=0.0011 Score=63.45 Aligned_cols=82 Identities=7% Similarity=0.163 Sum_probs=57.3
Q ss_pred cccceeccccCCCCCCCccccc-CcccEEEecccc-ccccCCccccCC----CCCCEEEccCCc-CCcCcchhccCCCCC
Q 040908 41 SLTDLRISDLNGPEATLPDLRN-RTFKNLILRSCN-LTGELPHFLGEV----SEMKVLDLSFNK-LNGTIPESFARLADV 113 (790)
Q Consensus 41 ~L~~L~l~~n~~~~~~~~~~~~-~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~g~ip~~~~~l~~L 113 (790)
.|+.|+++++.++......+.. ++|+.|+|++|. |+..-=..++.+ ++|++|+|+++. ++..==..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 4566666665554444444444 789999999995 775433445554 479999999974 774333467889999
Q ss_pred cEEEeeCCc
Q 040908 114 DFIYLTGNL 122 (790)
Q Consensus 114 ~~L~ls~N~ 122 (790)
+.|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 999999985
No 435
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.30 E-value=0.013 Score=62.61 Aligned_cols=32 Identities=31% Similarity=0.427 Sum_probs=28.1
Q ss_pred CCcEEeccCCCCcEEecCCCCeEEeecCCccc
Q 040908 567 RLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 598 (790)
Q Consensus 567 ~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~ 598 (790)
...++|+|+.+.||++++++.+.|.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35699999999999999888899999987764
No 436
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.17 E-value=0.023 Score=61.95 Aligned_cols=143 Identities=20% Similarity=0.244 Sum_probs=82.0
Q ss_pred eeeecccCcEEEEeeeecC--------CcEEEEEEccccchh------------------cHHHHHHHHHHhhccCCCce
Q 040908 451 ANKIGEGGFGPVYKGLLAD--------GTLIAVKQLSAKSKQ------------------GNREFVNEIGTISALQHPHL 504 (790)
Q Consensus 451 ~~~LG~G~fG~Vy~g~~~~--------g~~vAvK~~~~~~~~------------------~~~~~~~E~~~l~~l~H~ni 504 (790)
.+.|..|-...+|+....+ +..|.+++....... .......|..+++.+...++
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3567668888899988653 367888876443211 01123358888888854444
Q ss_pred -eeeeeEEEeCCeEEEEEEeccCCChhhh-----------------hcCCcc-ccCCCC--hhhHHHHHHHHH-------
Q 040908 505 -VKLYGCCIEGNQLLLIYEYLENNSLARA-----------------LFGPEE-HRLKLD--WPTRHNICIGIA------- 556 (790)
Q Consensus 505 -v~l~g~~~~~~~~~lV~Ey~~~gsL~~~-----------------l~~~~~-~~~~l~--~~~~~~i~~~ia------- 556 (790)
.++++++..+ +|+||+++-+|..- +|.... ...... |....++..++.
T Consensus 137 ~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 5667665432 89999997655321 111100 011122 223333332221
Q ss_pred ---------------HHHH----Hhhhc-CCCcEEeccCCCCcEEecCC------CCeEEeecCCcc
Q 040908 557 ---------------RGLA----YLHEE-SRLKIVHRDIKATNVLLDKD------LNPKISDFGLAK 597 (790)
Q Consensus 557 ---------------~aL~----yLH~~-~~~~iiHrDlk~~NILl~~~------~~~kl~DFGla~ 597 (790)
..+. +|... ....++|+|+.+.|||++++ +.+.|+||..|.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 22221 23458999999999999887 789999998765
No 437
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.87 E-value=0.031 Score=54.92 Aligned_cols=102 Identities=15% Similarity=0.099 Sum_probs=65.5
Q ss_pred CChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCccccCCCCcce
Q 040908 527 NSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHI 606 (790)
Q Consensus 527 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 606 (790)
-+|.+.|. ..+.++++.++|.++.|.+.+|.-+-... .+ ..+=+-|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~---~~~~PlsEEqaWALc~Qc~~~L~~~~~~~-~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILR---LYNQPINEEQAWAVCYQCCGSLRAAARRR-QP-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHH---HHTSCCCHHHHHHHHHHHHHHHHHHHHTT-CC-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHH---HcCCCcCHHHHHHHHHHHHHHHHhhhhcc-cC-CceecCCcceEEecCCceeccc-cccc---------
Confidence 37888883 44578999999999999999987762110 01 1233346899999999888764 1111
Q ss_pred eeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCC
Q 040908 607 STRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRS 648 (790)
Q Consensus 607 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~ 648 (790)
.....+.+||... ...+.+.=|||+|+++|.-+--..
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL 134 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL 134 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence 0112456777653 345678999999999999886443
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.79 E-value=0.012 Score=53.49 Aligned_cols=57 Identities=21% Similarity=0.191 Sum_probs=40.3
Q ss_pred ceeccccCCCCCCCcccccCcccEEEeccccccccCCccccCCCCCCEEEccCCcCC
Q 040908 44 DLRISDLNGPEATLPDLRNRTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLN 100 (790)
Q Consensus 44 ~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 100 (790)
.++.+++.++...+|.....+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 344445555411222222367999999999999555567889999999999999875
No 439
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.64 E-value=0.021 Score=62.22 Aligned_cols=81 Identities=12% Similarity=0.175 Sum_probs=46.1
Q ss_pred CcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEec
Q 040908 63 RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDL 141 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~l 141 (790)
..|+.+.+. +.++..-...|.+|.+|+.++|..| ++..-..+|.++.+|+.+.|..+ ++..-...|.. .+|+.+++
T Consensus 288 ~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~ 364 (394)
T 4gt6_A 288 PALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEY 364 (394)
T ss_dssp TTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEE
T ss_pred cccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEE
Confidence 566666664 3444233345666777777777643 44223445677777777777544 44332334444 66777777
Q ss_pred cCCcc
Q 040908 142 SYNNF 146 (790)
Q Consensus 142 s~N~l 146 (790)
.+|..
T Consensus 365 ~~~~~ 369 (394)
T 4gt6_A 365 SGSRS 369 (394)
T ss_dssp SSCHH
T ss_pred CCcee
Confidence 66654
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.55 E-value=0.0018 Score=63.14 Aligned_cols=59 Identities=12% Similarity=0.162 Sum_probs=29.7
Q ss_pred CcccEEEecccccccc----CCccccCCCCCCEEEccCCcCCcC----cchhccCCCCCcEEEeeCC
Q 040908 63 RTFKNLILRSCNLTGE----LPHFLGEVSEMKVLDLSFNKLNGT----IPESFARLADVDFIYLTGN 121 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----ip~~~~~l~~L~~L~ls~N 121 (790)
+.|+.|+|++|+|... |.+.+..=+.|++|+|+.|.|... +-..+..-+.|+.|+|++|
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 4566666666666532 222233335566666666666421 2223444445666666544
No 441
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.45 E-value=0.031 Score=60.83 Aligned_cols=97 Identities=12% Similarity=0.012 Sum_probs=53.0
Q ss_pred CcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEec
Q 040908 63 RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDL 141 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~l 141 (790)
..|+.+.+..+.+. ...|.++.+|+.+.+..+ ++..-...|.++++|+.++|.++ ++..-...|.. .+|+.++|
T Consensus 276 ~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~l 350 (394)
T 4fs7_A 276 SGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINF 350 (394)
T ss_dssp TTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECC
T ss_pred cccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEE
Confidence 55666655554322 224566666666666544 44222345666666666666543 44333344444 66666666
Q ss_pred cCCccccCCCCCCCCCCcceeeec
Q 040908 142 SYNNFADESSGSDCQNGAVNLFAS 165 (790)
Q Consensus 142 s~N~l~g~~p~~~~~~~~l~~~~~ 165 (790)
..| ++..-...|..+.+|+.+..
T Consensus 351 p~~-l~~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 351 PLS-LRKIGANAFQGCINLKKVEL 373 (394)
T ss_dssp CTT-CCEECTTTBTTCTTCCEEEE
T ss_pred Ccc-ccEehHHHhhCCCCCCEEEE
Confidence 655 55444556666666665544
No 442
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.36 E-value=0.076 Score=57.25 Aligned_cols=99 Identities=7% Similarity=0.071 Sum_probs=51.2
Q ss_pred CcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEec
Q 040908 63 RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDL 141 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~l 141 (790)
..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++++|+.+.+.+|.++..-...|.. .+|+.++|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 45666666544 43233345556666666666433 43222334566666666666666555433444444 56666666
Q ss_pred cCCccccCCCCCCCCCCcceeee
Q 040908 142 SYNNFADESSGSDCQNGAVNLFA 164 (790)
Q Consensus 142 s~N~l~g~~p~~~~~~~~l~~~~ 164 (790)
..+ ++..-..+|..+.+|+.+.
T Consensus 318 p~~-l~~I~~~aF~~C~~L~~i~ 339 (379)
T 4h09_A 318 PTA-LKTIQVYAFKNCKALSTIS 339 (379)
T ss_dssp CTT-CCEECTTTTTTCTTCCCCC
T ss_pred Ccc-ccEEHHHHhhCCCCCCEEE
Confidence 543 4433444555555554443
No 443
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.09 E-value=0.0055 Score=59.73 Aligned_cols=103 Identities=10% Similarity=-0.019 Sum_probs=65.9
Q ss_pred cccCcccccCc-ccccc----------ccccccceeccccCCCCCCCccc----c-cCcccEEEecccccccc----CCc
Q 040908 22 IHSGKWFGWAN-SVWHY----------FSESLTDLRISDLNGPEATLPDL----R-NRTFKNLILRSCNLTGE----LPH 81 (790)
Q Consensus 22 ~~L~~L~l~~N-~l~~~----------~~~~L~~L~l~~n~~~~~~~~~~----~-~~~L~~L~L~~N~l~~~----~p~ 81 (790)
+.|+.|+|++| .|... .-..|+.|+|++|.+.......+ . ++.|+.|+|++|.|... +-+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 55777777775 65411 12367778887777763322222 2 27899999999999853 334
Q ss_pred cccCCCCCCEEEccCCc---CCc----CcchhccCCCCCcEEEeeCCccc
Q 040908 82 FLGEVSEMKVLDLSFNK---LNG----TIPESFARLADVDFIYLTGNLLT 124 (790)
Q Consensus 82 ~~~~l~~L~~L~Ls~N~---l~g----~ip~~~~~l~~L~~L~ls~N~l~ 124 (790)
.+..=+.|++|+|++|. +.. .+-..+..-+.|+.|+|+.|.+-
T Consensus 121 aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 55555679999999763 331 13344555677888888777543
No 444
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.00 E-value=0.14 Score=55.49 Aligned_cols=157 Identities=11% Similarity=-0.039 Sum_probs=71.2
Q ss_pred EEEccCCcCcccCChhhhcccccCcccccCcccccccc------ccccceeccccCCCCCCCcccccCcccEEEeccccc
Q 040908 2 YRTVQSNRLSGELPEELGSLIHSGKWFGWANSVWHYFS------ESLTDLRISDLNGPEATLPDLRNRTFKNLILRSCNL 75 (790)
Q Consensus 2 ~L~Ls~N~l~g~iP~~~~~L~~L~~L~l~~N~l~~~~~------~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~N~l 75 (790)
.+.|.++-.+ .-...|.++.+|+.+.+..| ++.+.. ..|+.+.+.++.... ....+....|+.+.+..+.
T Consensus 166 ~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i-~~~~~~~~~l~~i~ip~~~- 241 (394)
T 4fs7_A 166 YVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYL-GDFALSKTGVKNIIIPDSF- 241 (394)
T ss_dssp EEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEE-CTTTTTTCCCCEEEECTTC-
T ss_pred EEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEe-ehhhcccCCCceEEECCCc-
Confidence 4556544332 33446888889999988776 322111 134444333322111 1111222445555554322
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCcch---------------------hccCCCCCcEEEeeCCcccccCCccccC-
Q 040908 76 TGELPHFLGEVSEMKVLDLSFNKLNGTIPE---------------------SFARLADVDFIYLTGNLLTGKVPQWMFG- 133 (790)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~---------------------~~~~l~~L~~L~ls~N~l~g~~p~~~~~- 133 (790)
+..-...|.++..|+.+.+..|... .-.. .|..+.+|+.+.+.++ ++..-...|..
T Consensus 242 ~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c 319 (394)
T 4fs7_A 242 TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESC 319 (394)
T ss_dssp CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC
T ss_pred eecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccccccccccccccccccc-cceechhhhcCC
Confidence 2122234445555555555444332 2223 3455555555555443 33222333333
Q ss_pred CCCcEEeccCCccccCCCCCCCCCCcceeeec
Q 040908 134 RGPENIDLSYNNFADESSGSDCQNGAVNLFAS 165 (790)
Q Consensus 134 ~~L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~ 165 (790)
.+|+.++|..+ ++..-...|..+.+|+.+..
T Consensus 320 ~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~l 350 (394)
T 4fs7_A 320 TSLVSIDLPYL-VEEIGKRSFRGCTSLSNINF 350 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTTTTCTTCCEECC
T ss_pred CCCCEEEeCCc-ccEEhHHhccCCCCCCEEEE
Confidence 55666665433 44334445555555554433
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.31 E-value=0.11 Score=56.97 Aligned_cols=74 Identities=11% Similarity=0.086 Sum_probs=48.3
Q ss_pred eeeecccCcEEEEeeeecC--------CcEEEEEEccccchhcHHHHHHHHHHhhccCCCce-eeeeeEEEeCCeEEEEE
Q 040908 451 ANKIGEGGFGPVYKGLLAD--------GTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHL-VKLYGCCIEGNQLLLIY 521 (790)
Q Consensus 451 ~~~LG~G~fG~Vy~g~~~~--------g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~ 521 (790)
.+.+..|-...+|+....+ +..+++|+...... ......+|..+++.+...++ .++++.+ .+ ++||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADF--PE--GRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--CEEE
Confidence 4677778888899988653 57788988754321 11223578888888753334 4455433 22 6899
Q ss_pred EeccCCCh
Q 040908 522 EYLENNSL 529 (790)
Q Consensus 522 Ey~~~gsL 529 (790)
||++|..|
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998764
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.13 E-value=0.18 Score=54.22 Aligned_cols=101 Identities=5% Similarity=-0.028 Sum_probs=74.6
Q ss_pred CcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CCCcEEec
Q 040908 63 RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RGPENIDL 141 (790)
Q Consensus 63 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~L~~l~l 141 (790)
.+|+.+.+..+ +...-...|.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +.......+.. .+|+.+++
T Consensus 217 ~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 217 KNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred cccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 67888888665 44345567888999999999776 65344567888999999998655 54333444555 88999999
Q ss_pred cCCccccCCCCCCCCCCcceeeecC
Q 040908 142 SYNNFADESSGSDCQNGAVNLFASS 166 (790)
Q Consensus 142 s~N~l~g~~p~~~~~~~~l~~~~~~ 166 (790)
.+|.++......|..+.+|+.+...
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECC
T ss_pred cccccceehhhhhcCCCCCCEEEcC
Confidence 9888887777788888888887764
No 447
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=93.98 E-value=0.1 Score=56.67 Aligned_cols=106 Identities=10% Similarity=0.095 Sum_probs=79.9
Q ss_pred ccccc-CcccEEEeccccccccCCccccCCCCCCEEEccCCcCCcCcchhccCCCCCcEEEeeCCcccccCCccccC-CC
Q 040908 58 PDLRN-RTFKNLILRSCNLTGELPHFLGEVSEMKVLDLSFNKLNGTIPESFARLADVDFIYLTGNLLTGKVPQWMFG-RG 135 (790)
Q Consensus 58 ~~~~~-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~ 135 (790)
..|.. ..|+.+.+.++..+ .-...|.++.+|+.+.+. +.++..-...|.++.+|+.++|..| ++..-...|.. .+
T Consensus 259 ~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 259 HAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred ceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 34555 78999999876654 556678999999999996 5666344467999999999999865 55444556666 89
Q ss_pred CcEEeccCCccccCCCCCCCCCCcceeeecCC
Q 040908 136 PENIDLSYNNFADESSGSDCQNGAVNLFASSS 167 (790)
Q Consensus 136 L~~l~ls~N~l~g~~p~~~~~~~~l~~~~~~~ 167 (790)
|+.+.|..+ ++..-...|..+.+|+.+....
T Consensus 336 L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~ 366 (394)
T 4gt6_A 336 LERIAIPSS-VTKIPESAFSNCTALNNIEYSG 366 (394)
T ss_dssp CCEEEECTT-CCBCCGGGGTTCTTCCEEEESS
T ss_pred CCEEEECcc-cCEEhHhHhhCCCCCCEEEECC
Confidence 999999755 7666667888888898887654
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.91 E-value=0.48 Score=51.53 Aligned_cols=29 Identities=24% Similarity=0.407 Sum_probs=24.6
Q ss_pred cEEeccCCCCcEEe------cCCCCeEEeecCCcc
Q 040908 569 KIVHRDIKATNVLL------DKDLNPKISDFGLAK 597 (790)
Q Consensus 569 ~iiHrDlk~~NILl------~~~~~~kl~DFGla~ 597 (790)
.++|+|+.+.|||+ +++..++++||-+|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 36799999999999 456779999998876
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=84.78 E-value=4.3 Score=39.63 Aligned_cols=116 Identities=7% Similarity=0.080 Sum_probs=78.5
Q ss_pred CCCceeeeeeEEEeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHHHhhhcCCCcEEeccCCCCc
Q 040908 500 QHPHLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLAYLHEESRLKIVHRDIKATN 579 (790)
Q Consensus 500 ~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiHrDlk~~N 579 (790)
.||++++. ..-...+.+.+.|+.-+.+-=...+ ..++...+++++..|+....+++.. +|--+.|.|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~i-------k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNI-------KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGG-------GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHH-------HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 58888766 4555666666666644322111122 4578889999999999888777643 788999999
Q ss_pred EEecCCCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCc
Q 040908 580 VLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIM 651 (790)
Q Consensus 580 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~ 651 (790)
|+++.++.+++.-.|+-..+.+. ..+...=.-.+=+++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l~P~-----------------------~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVDPL-----------------------PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTBSCC-----------------------CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCCCCC-----------------------CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999877764322221 11122223357788899999988775
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=81.50 E-value=0.17 Score=56.35 Aligned_cols=61 Identities=10% Similarity=0.106 Sum_probs=18.6
Q ss_pred eeeeecccCcEEEEeeeecC-CcEEEE------EEcccc--chhcHHHHHHHHHHhhccCCCceeeeeeEEEe
Q 040908 450 VANKIGEGGFGPVYKGLLAD-GTLIAV------KQLSAK--SKQGNREFVNEIGTISALQHPHLVKLYGCCIE 513 (790)
Q Consensus 450 ~~~~LG~G~fG~Vy~g~~~~-g~~vAv------K~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 513 (790)
+.+.|| ||.||+|.+.. ..+||| |..+.. +.+....|.+|..++...+|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 456676 99999999864 367888 766542 22334568889999999999999999888653
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=77.82 E-value=1.7 Score=30.71 Aligned_cols=25 Identities=16% Similarity=0.177 Sum_probs=10.2
Q ss_pred eehhHHHHHHH-HHHHHhhhhccccC
Q 040908 393 LGIVAAAAVVI-ILVVGILWWKGCFR 417 (790)
Q Consensus 393 i~i~~~~~~~~-~l~~~~~~~~~~~~ 417 (790)
.+++.++++++ ++++.+++||++++
T Consensus 15 ~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 15 TGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 34444344333 33333445554433
No 452
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=76.98 E-value=1.1 Score=30.68 Aligned_cols=30 Identities=13% Similarity=0.294 Sum_probs=16.1
Q ss_pred CCCcccceEeehhHHHHHHH--HHHHHhhhhc
Q 040908 384 SSGISVGTVLGIVAAAAVVI--ILVVGILWWK 413 (790)
Q Consensus 384 ~~~~~~~~ii~i~~~~~~~~--~l~~~~~~~~ 413 (790)
+++.+.+.|.|+++++++.+ ++.+++++||
T Consensus 5 ~~~ls~GaIAGiVvG~v~gv~li~~l~~~~~r 36 (38)
T 2k1k_A 5 SRGLTGGEIVAVIFGLLLGAALLLGILVFRSR 36 (38)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCceeeeehHHHHHHHHHHHHHHHHee
Confidence 34455677777777765433 2333344444
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=76.25 E-value=9 Score=37.47 Aligned_cols=115 Identities=11% Similarity=0.104 Sum_probs=77.5
Q ss_pred CCCceeeeeeEEEeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHHHHHHH-HhhhcCCCcEEeccCCCC
Q 040908 500 QHPHLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGIARGLA-YLHEESRLKIVHRDIKAT 578 (790)
Q Consensus 500 ~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~-yLH~~~~~~iiHrDlk~~ 578 (790)
.||++ -...-.+++.+.+.|+.-+++.=...+ ..++...+++++.+|+.... +++. -+|--+.|.
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCc
Confidence 57777 333446677777777755444333333 35788899999999998877 6654 478889999
Q ss_pred cEEecCCCCeEEeecCCccccCCCCcceeeccccCCCcccHHHhhcCCCCChhhHHHHHHHHHHHHhCCCCCc
Q 040908 579 NVLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVSGRSNIM 651 (790)
Q Consensus 579 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~elltG~~p~~ 651 (790)
||++|.++.+++.-.|+-..+++.. +.+|- =.-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~lpP~e-------------~~ee~----------fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESLPPDE-------------WDDER----------LLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTTBSSCS-------------CCHHH----------HHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcccCCCCC-------------CCHHH----------HHHHHHHHHHHHHcCCCCHH
Confidence 9999999999998777643222111 11221 13356778888888887664
No 454
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=68.69 E-value=2.5 Score=29.90 Aligned_cols=25 Identities=4% Similarity=0.125 Sum_probs=10.4
Q ss_pred ehhHHHHHHH-HHHHHhhhhccccCC
Q 040908 394 GIVAAAAVVI-ILVVGILWWKGCFRP 418 (790)
Q Consensus 394 ~i~~~~~~~~-~l~~~~~~~~~~~~~ 418 (790)
|++.++++++ ++++.+++||+++++
T Consensus 15 gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 15 GVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred eehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 3333343332 333344555554443
No 455
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=67.79 E-value=1.9 Score=30.48 Aligned_cols=25 Identities=20% Similarity=0.149 Sum_probs=9.7
Q ss_pred EeehhHHHHHHHHHH-HHhhhhcccc
Q 040908 392 VLGIVAAAAVVIILV-VGILWWKGCF 416 (790)
Q Consensus 392 ii~i~~~~~~~~~l~-~~~~~~~~~~ 416 (790)
|+++++++++++++. +.++|+|+++
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhh
Confidence 344444433333333 3344444443
No 456
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=58.92 E-value=4.1 Score=30.07 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=16.4
Q ss_pred ccceEeehhHHHHHHHHHHHHhhhhccccCCCC
Q 040908 388 SVGTVLGIVAAAAVVIILVVGILWWKGCFRPKY 420 (790)
Q Consensus 388 ~~~~ii~i~~~~~~~~~l~~~~~~~~~~~~~~~ 420 (790)
.+++|++.+++..+++.+++.++|..+..++++
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~LwK~GFFKR~~ 40 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALWKIGFFKRPL 40 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 345555555555455445544555444444443
No 457
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=58.26 E-value=4.2 Score=30.10 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=17.2
Q ss_pred cccceEeehhHHHHHHHHHHHHhhhhccccCCCC
Q 040908 387 ISVGTVLGIVAAAAVVIILVVGILWWKGCFRPKY 420 (790)
Q Consensus 387 ~~~~~ii~i~~~~~~~~~l~~~~~~~~~~~~~~~ 420 (790)
..+++|++.+++..+++.+++.++|..+..++++
T Consensus 10 vp~wiIi~svl~GLllL~li~~~LwK~GFFkR~~ 43 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNR 43 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 3456665555555555555544555444444443
No 458
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=57.11 E-value=3.8 Score=28.40 Aligned_cols=11 Identities=9% Similarity=0.338 Sum_probs=4.3
Q ss_pred eEeehhHHHHH
Q 040908 391 TVLGIVAAAAV 401 (790)
Q Consensus 391 ~ii~i~~~~~~ 401 (790)
+++++++++++
T Consensus 15 I~~~vv~Gv~l 25 (41)
T 2k9y_A 15 VIGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHHH
T ss_pred EEeehhHHHHH
Confidence 33344434333
No 459
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=47.33 E-value=12 Score=26.16 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=15.2
Q ss_pred ccceEeehhHHHHHHHHHHHHhhhhccccCC
Q 040908 388 SVGTVLGIVAAAAVVIILVVGILWWKGCFRP 418 (790)
Q Consensus 388 ~~~~ii~i~~~~~~~~~l~~~~~~~~~~~~~ 418 (790)
.+++|+..+++..+++.+++..+|..+..++
T Consensus 9 p~wiIi~s~l~GLllL~li~~~LwK~GFFkR 39 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTILVLAMWKVGFFKR 39 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcccC
Confidence 3555555555544444444445554444443
No 460
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=39.26 E-value=1.2e+02 Score=31.50 Aligned_cols=141 Identities=16% Similarity=0.173 Sum_probs=72.8
Q ss_pred cceeeeecccCcEEEEeeeecCCcEEEEEEccccchhcHHHHHHHHHHhhccCCCceeeeeeE-----------------
Q 040908 448 FDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGC----------------- 510 (790)
Q Consensus 448 y~~~~~LG~G~fG~Vy~g~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~----------------- 510 (790)
++.++..-.|..|.++-.. ++..++||-.. ....+.|..++...-.+.-|+..-+.-.
T Consensus 71 v~~I~~s~~Gstgvff~~t--d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~ 145 (342)
T 1cja_A 71 FKGIERSEKGTEGLFFVET--ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKS 145 (342)
T ss_dssp EEEEEECCSTTSCEEEEEE--SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSS
T ss_pred eeEEEeccCCCCCeEEEEe--CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhh
Confidence 4556666667655544444 57788899442 2223334444444444455542211100
Q ss_pred -----EEeCCeEEEEEEeccCCChhhhhcCCccccCCCChhhHHHHHHHH--HHHHHHhhhcC-CCcEEe-ccCCCCcEE
Q 040908 511 -----CIEGNQLLLIYEYLENNSLARALFGPEEHRLKLDWPTRHNICIGI--ARGLAYLHEES-RLKIVH-RDIKATNVL 581 (790)
Q Consensus 511 -----~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i--a~aL~yLH~~~-~~~iiH-rDlk~~NIL 581 (790)
.......+++|||.+|..|.+.-+.... ..+.. +.+.++ +-++.++..++ +.+.+. .--.++|||
T Consensus 146 ~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~--~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL 219 (342)
T 1cja_A 146 FRVITTLANQANILLMELVRGITLNKLTTTSAP--EVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIM 219 (342)
T ss_dssp SCHHHHHTTCSEEEEEECCCEEESTTCCSSSHH--HHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEE
T ss_pred hHHHHHhhcccceehhhhcCCCccccchhhhhh--hhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheE
Confidence 0012257799999997665543211100 11221 223332 23455555443 333322 125789999
Q ss_pred ecCCCC-eEEeecCCcccc
Q 040908 582 LDKDLN-PKISDFGLAKLD 599 (790)
Q Consensus 582 l~~~~~-~kl~DFGla~~~ 599 (790)
++++.. +.++|-+++...
T Consensus 220 ~~~~n~~~~~IDhn~af~~ 238 (342)
T 1cja_A 220 LSERGATVVPIDSKIIPLD 238 (342)
T ss_dssp EESBTTCEEECSCCCCCCC
T ss_pred EeCCCCeEEEEcCCccccC
Confidence 987554 889999998753
No 461
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=31.00 E-value=36 Score=23.99 Aligned_cols=6 Identities=17% Similarity=0.257 Sum_probs=2.3
Q ss_pred hhHHHH
Q 040908 395 IVAAAA 400 (790)
Q Consensus 395 i~~~~~ 400 (790)
|+++++
T Consensus 13 IA~gVV 18 (44)
T 2ks1_B 13 IATGMV 18 (44)
T ss_dssp STHHHH
T ss_pred EEeehh
Confidence 333333
No 462
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=26.56 E-value=2.1e+02 Score=32.30 Aligned_cols=47 Identities=21% Similarity=0.130 Sum_probs=34.8
Q ss_pred ChhhHHHHHHHHH--HHHHHhhhcCCCcEEeccCCCCcEEecCCCCeEEeecCCcc
Q 040908 544 DWPTRHNICIGIA--RGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 597 (790)
Q Consensus 544 ~~~~~~~i~~~ia--~aL~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DFGla~ 597 (790)
.|..+..++..+| ..+.|+=. =+|=.++||||+.+|++.=+|||.+-
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILG-------igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILG-------VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-------CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cHHHHHHHHHHHHHHhHhheeee-------ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 3556666666655 34566632 36778999999999999999999874
No 463
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=23.12 E-value=14 Score=24.68 Aligned_cols=6 Identities=17% Similarity=-0.108 Sum_probs=2.6
Q ss_pred hhhhcc
Q 040908 409 ILWWKG 414 (790)
Q Consensus 409 ~~~~~~ 414 (790)
.+++|+
T Consensus 28 ~~~iRR 33 (35)
T 1iij_A 28 GILIKR 33 (35)
T ss_dssp THHHHH
T ss_pred heEEee
Confidence 344443
No 464
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=22.60 E-value=32 Score=22.58 Aligned_cols=24 Identities=25% Similarity=0.578 Sum_probs=12.5
Q ss_pred cceEeehhHHHHHHHHHH-HHhhhh
Q 040908 389 VGTVLGIVAAAAVVIILV-VGILWW 412 (790)
Q Consensus 389 ~~~ii~i~~~~~~~~~l~-~~~~~~ 412 (790)
.+.+.|++++.++..+++ +.+++|
T Consensus 6 ~gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 6 PGVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEeEeHHHHHHHHHHHHHHhhe
Confidence 455667776655553333 334444
No 465
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=21.55 E-value=44 Score=26.13 Aligned_cols=23 Identities=26% Similarity=0.265 Sum_probs=9.5
Q ss_pred hHHHHHHHHHHHHhhhhccccCC
Q 040908 396 VAAAAVVIILVVGILWWKGCFRP 418 (790)
Q Consensus 396 ~~~~~~~~~l~~~~~~~~~~~~~ 418 (790)
++.++|++++-++++++++|+.+
T Consensus 24 LifA~vLfi~GI~iilS~kcrCk 46 (74)
T 2zxe_G 24 LIVAAVLCVIGIIILLAGKCRCK 46 (74)
T ss_dssp HHHHHHHHHHHHHHHTTTC----
T ss_pred chhHHHHHHHHHHHHHcCccccC
Confidence 34444454444555555555543
Done!