AmiGO: BLAST Results


BLAST match view associations BLAST with AT1G74270 AT1G74270 AT1G74270	protein from Arabidopsis thaliana	1.1e-39
BLAST match view associations BLAST with AT1G07070 AT1G07070 AT1G07070	protein from Arabidopsis thaliana	2.3e-39
BLAST match view associations BLAST with AT1G41880 AT1G41880 AT1G41880	protein from Arabidopsis thaliana	2.6e-38
BLAST match view associations BLAST with AT3G55750 AT3G55750 AT3G55750	protein from Arabidopsis thaliana	3.4e-38
BLAST match view associations BLAST with PF11_0438 PF11_0438 PF11_0438 Ribosomal protein, putative	gene from Plasmodium falciparum	8.7e-24
BLAST match view associations BLAST with PF11_0438 PF11_0438 PF11_0438 60S ribosomal protein L35Ae, putative	protein from Plasmodium falciparum 3D7	8.7e-24
BLAST match view associations BLAST with rpl35a rpl35a rpl35a S60 ribosomal protein L35a	gene from Dictyostelium discoideum	3.1e-19
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Gallus gallus	5.0e-19
BLAST match view associations BLAST with rpl-33 rpl-33 rpl-33	gene from Caenorhabditis elegans	1.3e-18
BLAST match view associations BLAST with Rpl35a Rpl35a Rpl35a ribosomal protein L35a	gene from Rattus norvegicus	2.1e-18
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Canis lupus familiaris	2.7e-18
BLAST match view associations BLAST with RPL35A RPL35A RPL35A 60S ribosomal protein L35a	protein from Homo sapiens	2.7e-18
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Sus scrofa	2.7e-18
BLAST match view associations BLAST with RPL35A RPL35A RPL35A 60S ribosomal protein L35a	protein from Bos taurus	3.4e-18
BLAST match view associations BLAST with LOC100362338 LOC100362338 LOC100362338 ribosomal protein L35a-like	gene from Rattus norvegicus	7.0e-18
BLAST match view associations BLAST with RPL33B RPL33B RPL33B Ribosomal 60S subunit protein L33B	gene from Saccharomyces cerevisiae	9.5e-18
BLAST match view associations BLAST with rpl35a rpl35a rpl35a ribosomal protein L35a	gene_product from Danio rerio	1.4e-17
BLAST match view associations BLAST with RPL33A RPL33A RPL33A Ribosomal 60S subunit protein L33A	gene from Saccharomyces cerevisiae	2.0e-17
BLAST match view associations BLAST with LOC781576 LOC781576 LOC781576 Uncharacterized protein	protein from Bos taurus	4.8e-17
BLAST match view associations BLAST with RpL35A RpL35A RpL35A Ribosomal protein L35A	protein from Drosophila melanogaster	2.5e-16
BLAST match view associations BLAST with MGG_09927 MGG_09927 MGG_09927 60S ribosomal protein L33-B	protein from Magnaporthe oryzae 70-15	1.3e-15
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Canis lupus familiaris	1.2e-14
BLAST match view associations BLAST with RPL35A RPL35A RPL35A 60S ribosomal protein L35a	protein from Homo sapiens	5.3e-13
BLAST match view associations BLAST with LOC100362049 LOC100362049 LOC100362049 ribosomal protein L35a-like	gene from Rattus norvegicus	1.2e-12
BLAST match view associations BLAST with LOC100359825 LOC100359825 LOC100359825 ribosomal protein L35a-like	gene from Rattus norvegicus	1.2e-12
BLAST match view associations BLAST with E1BHM9 E1BHM9 E1BHM9 Uncharacterized protein	protein from Bos taurus	3.9e-12
BLAST match view associations BLAST with RGD1560900 RGD1560900 RGD1560900 similar to ribosomal protein L35a	gene from Rattus norvegicus	8.2e-12
BLAST match view associations BLAST with F1M0T2 F1M0T2 F1M0T2 Uncharacterized protein	protein from Rattus norvegicus	2.0e-10
BLAST match view associations BLAST with LOC100516261 LOC100516261 LOC100516261 Uncharacterized protein	protein from Sus scrofa	1.8e-09

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040909
        (98 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2019627 - symbol:AT1G74270 species:3702 "Arabi...   423  1.1e-39   1
TAIR|locus:2007422 - symbol:AT1G07070 species:3702 "Arabi...   420  2.3e-39   1
TAIR|locus:2033548 - symbol:AT1G41880 species:3702 "Arabi...   410  2.6e-38   1
TAIR|locus:2078991 - symbol:AT3G55750 species:3702 "Arabi...   409  3.4e-38   1
GENEDB_PFALCIPARUM|PF11_0438 - symbol:PF11_0438 "Ribosoma...   273  8.7e-24   1
UNIPROTKB|Q8IHT9 - symbol:PF11_0438 "60S ribosomal protei...   273  8.7e-24   1
DICTYBASE|DDB_G0270424 - symbol:rpl35a "S60 ribosomal pro...   230  3.1e-19   1
UNIPROTKB|F1NQ35 - symbol:RPL35A "Uncharacterized protein...   165  5.0e-19   2
WB|WBGene00004447 - symbol:rpl-33 species:6239 "Caenorhab...   163  1.3e-18   2
RGD|628793 - symbol:Rpl35a "ribosomal protein L35a" speci...   165  2.1e-18   2
UNIPROTKB|E2QYD8 - symbol:RPL35A "Uncharacterized protein...   165  2.7e-18   2
UNIPROTKB|P18077 - symbol:RPL35A "60S ribosomal protein L...   165  2.7e-18   2
UNIPROTKB|F2Z5Q8 - symbol:RPL35A "Uncharacterized protein...   165  2.7e-18   2
UNIPROTKB|Q56JY1 - symbol:RPL35A "60S ribosomal protein L...   164  3.4e-18   2
ASPGD|ASPL0000041158 - symbol:AN2980 species:162425 "Emer...   219  4.6e-18   1
RGD|2318348 - symbol:LOC100362338 "ribosomal protein L35a...   160  7.0e-18   2
RGD|2323736 - symbol:LOC100362957 "ribosomal protein L35a...   165  8.9e-18   2
SGD|S000005760 - symbol:RPL33B "Ribosomal 60S subunit pro...   216  9.5e-18   1
ZFIN|ZDB-GENE-040718-190 - symbol:rpl35a "ribosomal prote...   167  1.4e-17   2
SGD|S000006064 - symbol:RPL33A "Ribosomal 60S subunit pro...   213  2.0e-17   1
UNIPROTKB|E1BMJ8 - symbol:LOC781576 "Uncharacterized prot...   164  4.8e-17   2
POMBASE|SPBC1921.01c - symbol:rpl35b "60S ribosomal prote...   209  5.3e-17   1
RGD|2325092 - symbol:LOC100359636 "ribosomal protein L35a...   147  1.6e-16   2
FB|FBgn0037328 - symbol:RpL35A "Ribosomal protein L35A" s...   140  2.5e-16   2
POMBASE|SPCP31B10.08c - symbol:rpl35a "60S ribosomal prot...   199  6.0e-16   1
RGD|6498396 - symbol:LOC100910496 "60S ribosomal protein ...   165  6.6e-16   2
UNIPROTKB|G4MRJ2 - symbol:MGG_09927 "60S ribosomal protei...   196  1.3e-15   1
UNIPROTKB|J9P9Q2 - symbol:J9P9Q2 "Uncharacterized protein...   143  1.2e-14   2
UNIPROTKB|C9K025 - symbol:RPL35A "60S ribosomal protein L...   114  5.3e-13   2
RGD|2318932 - symbol:LOC100362049 "ribosomal protein L35a...   168  1.2e-12   1
RGD|2323316 - symbol:LOC100359825 "ribosomal protein L35a...   168  1.2e-12   1
UNIPROTKB|E1BHM9 - symbol:E1BHM9 "Uncharacterized protein...   163  3.9e-12   1
RGD|1560900 - symbol:RGD1560900 "similar to ribosomal pro...   160  8.2e-12   1
RGD|1597244 - symbol:H60c "histocompatibility 60c" specie...   156  2.2e-11   1
UNIPROTKB|F1M0T2 - symbol:F1M0T2 "Uncharacterized protein...   147  2.0e-10   1
UNIPROTKB|I3LIK0 - symbol:LOC100516261 "Uncharacterized p...   138  1.8e-09   1


>TAIR|locus:2019627 [details] [associations]
            symbol:AT1G74270 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
            "translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 EnsemblPlants:AT1G74270.1 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AC020579 GO:GO:0022625
            KO:K02917 HOGENOM:HOG000195636 ProtClustDB:CLSN2682223
            PANTHER:PTHR10902 EMBL:AF370320 EMBL:AY063108 EMBL:AY085956
            IPI:IPI00520606 PIR:B96771 RefSeq:NP_177567.1 UniGene:At.18151
            ProteinModelPortal:Q9C912 SMR:Q9C912 STRING:Q9C912 GeneID:843767
            KEGG:ath:AT1G74270 KEGG:dosa:Os05t0555800-00 GeneFarm:166
            TAIR:At1g74270 InParanoid:Q9C912 OMA:FYVGKRC PhylomeDB:Q9C912
            Genevestigator:Q9C912 GermOnline:AT1G74270 Uniprot:Q9C912
        Length = 112

 Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
 Identities = 84/112 (75%), Positives = 92/112 (82%)

Query:     1 MVKGRQGERIKLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEE--------------A 46
             MVKGRQGER++LYVRGTILGYKRSKSNQYPNTSL+QI+GVN +EE              A
Sbjct:     1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60

Query:    47 KTKKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             KTKKNG+HYRCIWGKV R H NSGVVRAKF SNLPPKS+G RVRVFMYP+NI
Sbjct:    61 KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112


>TAIR|locus:2007422 [details] [associations]
            symbol:AT1G07070 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
            "translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 EnsemblPlants:AT1G07070.1 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AC067971 GO:GO:0022625
            KO:K02917 EMBL:AK119060 EMBL:BT004714 EMBL:AY086795 IPI:IPI00526309
            PIR:E86205 RefSeq:NP_172188.1 UniGene:At.42314
            ProteinModelPortal:Q9LMK0 SMR:Q9LMK0 STRING:Q9LMK0 PaxDb:Q9LMK0
            PRIDE:Q9LMK0 GeneID:837218 KEGG:ath:AT1G07070 GeneFarm:219
            TAIR:At1g07070 eggNOG:COG2451 HOGENOM:HOG000195636
            InParanoid:Q9LMK0 OMA:ISYQRSK PhylomeDB:Q9LMK0
            ProtClustDB:CLSN2682223 Genevestigator:Q9LMK0 GermOnline:AT1G07070
            PANTHER:PTHR10902 Uniprot:Q9LMK0
        Length = 112

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 83/112 (74%), Positives = 91/112 (81%)

Query:     1 MVKGRQGERIKLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEE--------------A 46
             MVKGRQGER++LYVRGTILGYKRSKSNQYPNTSL+Q++GVN  EE              A
Sbjct:     1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60

Query:    47 KTKKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             KTKKNG+HYRCIWGKV R H NSGVVRAKF SNLPPKS+G RVRVFMYP+NI
Sbjct:    61 KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112


>TAIR|locus:2033548 [details] [associations]
            symbol:AT1G41880 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
            "translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0022625
            "cytosolic large ribosomal subunit" evidence=IDA] [GO:0005829
            "cytosol" evidence=RCA] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            EnsemblPlants:AT1G41880.1 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0016020 GO:GO:0006412 GO:GO:0003735 InterPro:IPR009000
            SUPFAM:SSF50447 GO:GO:0022625 KO:K02917 eggNOG:COG2451
            HOGENOM:HOG000195636 ProtClustDB:CLSN2682223 PANTHER:PTHR10902
            EMBL:AC008046 EMBL:AF370549 EMBL:BT006517 EMBL:AY084500
            IPI:IPI00523743 PIR:D96492 RefSeq:NP_174951.1 UniGene:At.24952
            UniGene:At.48273 ProteinModelPortal:Q9FZH0 SMR:Q9FZH0 STRING:Q9FZH0
            PaxDb:Q9FZH0 PRIDE:Q9FZH0 GeneID:840799 KEGG:ath:AT1G41880
            GeneFarm:159 TAIR:At1g41880 InParanoid:Q9FZH0 OMA:CAKFRSN
            PhylomeDB:Q9FZH0 Genevestigator:Q9FZH0 GermOnline:AT1G41880
            Uniprot:Q9FZH0
        Length = 111

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 81/111 (72%), Positives = 91/111 (81%)

Query:     2 VKGRQGERIKLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEE--------------AK 47
             +KGRQGER++LYVRGT+LGYKRSKSNQYPNTSLIQI+GVN +EE              AK
Sbjct:     1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query:    48 TKKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             TKKNG+HYRCIWGKV R H NSGVVR+KF SNLPPKS+G RVRVFMYP+NI
Sbjct:    61 TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111


>TAIR|locus:2078991 [details] [associations]
            symbol:AT3G55750 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
            "translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
            [GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
            ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
            evidence=RCA] InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247
            ProDom:PD012670 PROSITE:PS01105 EnsemblPlants:AT3G55750.1
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412
            GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AL161667
            GO:GO:0022625 KO:K02917 HOGENOM:HOG000195636
            ProtClustDB:CLSN2682223 PANTHER:PTHR10902 UniGene:At.24952
            UniGene:At.48273 EMBL:AF446895 EMBL:AY052680 EMBL:AY087646
            EMBL:Z18517 IPI:IPI00542655 PIR:T47714 RefSeq:NP_191134.1
            ProteinModelPortal:P51422 SMR:P51422 STRING:P51422 GeneID:824741
            KEGG:ath:AT3G55750 GeneFarm:162 TAIR:At3g55750 InParanoid:P51422
            OMA:HRIRVVI PhylomeDB:P51422 Genevestigator:P51422
            GermOnline:AT3G55750 Uniprot:P51422
        Length = 111

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 80/111 (72%), Positives = 91/111 (81%)

Query:     2 VKGRQGERIKLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEE--------------AK 47
             +KGRQGER++LYVRGT+LGYKRSKSNQYPNTSL+QI+GVN +EE              AK
Sbjct:     1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query:    48 TKKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             TKKNG+HYRCIWGKV R H NSGVVR+KF SNLPPKS+G RVRVFMYP+NI
Sbjct:    61 TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111


>GENEDB_PFALCIPARUM|PF11_0438 [details] [associations]
            symbol:PF11_0438 "Ribosomal protein, putative"
            species:5833 "Plasmodium falciparum" [GO:0015934 "large ribosomal
            subunit" evidence=ISS] InterPro:IPR001780 Pfam:PF01247
            ProDom:PD012670 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0015934 KO:K02917
            HOGENOM:HOG000195636 PANTHER:PTHR10902 ProtClustDB:PTZ00041
            RefSeq:XP_001348107.1 ProteinModelPortal:Q8IHT9 IntAct:Q8IHT9
            MINT:MINT-1637156 PRIDE:Q8IHT9 EnsemblProtists:PF11_0438:mRNA
            GeneID:810983 KEGG:pfa:PF11_0438 EuPathDB:PlasmoDB:PF3D7_1142600
            OMA:YARDETD Uniprot:Q8IHT9
        Length = 140

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 55/105 (52%), Positives = 73/105 (69%)

Query:     8 ERIKLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEA------------KTKKN--GT 53
             + ++LY +G ILGYKRS+ NQ PN +LI IK VN K+ A            +T K+  G 
Sbjct:    36 QAVRLYEKGVILGYKRSQRNQDPNFTLISIKNVNTKKHAQFYVGKRVAYVYRTTKHHDGV 95

Query:    54 HYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
               +CIWGKV R+H NSGV+RAKFK+++PPK+ GDRVR+ MYP+NI
Sbjct:    96 KIKCIWGKVCRTHGNSGVIRAKFKTHIPPKAFGDRVRILMYPSNI 140


>UNIPROTKB|Q8IHT9 [details] [associations]
            symbol:PF11_0438 "60S ribosomal protein L35Ae, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0015934 "large
            ribosomal subunit" evidence=ISS] InterPro:IPR001780 Pfam:PF01247
            ProDom:PD012670 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0015934 KO:K02917
            HOGENOM:HOG000195636 PANTHER:PTHR10902 ProtClustDB:PTZ00041
            RefSeq:XP_001348107.1 ProteinModelPortal:Q8IHT9 IntAct:Q8IHT9
            MINT:MINT-1637156 PRIDE:Q8IHT9 EnsemblProtists:PF11_0438:mRNA
            GeneID:810983 KEGG:pfa:PF11_0438 EuPathDB:PlasmoDB:PF3D7_1142600
            OMA:YARDETD Uniprot:Q8IHT9
        Length = 140

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 55/105 (52%), Positives = 73/105 (69%)

Query:     8 ERIKLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEA------------KTKKN--GT 53
             + ++LY +G ILGYKRS+ NQ PN +LI IK VN K+ A            +T K+  G 
Sbjct:    36 QAVRLYEKGVILGYKRSQRNQDPNFTLISIKNVNTKKHAQFYVGKRVAYVYRTTKHHDGV 95

Query:    54 HYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
               +CIWGKV R+H NSGV+RAKFK+++PPK+ GDRVR+ MYP+NI
Sbjct:    96 KIKCIWGKVCRTHGNSGVIRAKFKTHIPPKAFGDRVRILMYPSNI 140


>DICTYBASE|DDB_G0270424 [details] [associations]
            symbol:rpl35a "S60 ribosomal protein L35a"
            species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
            evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0003735 "structural constituent
            of ribosome" evidence=IEA;ISS] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000049 "tRNA binding" evidence=IEA] [GO:0044351
            "macropinocytosis" evidence=RCA] InterPro:IPR001780 Pfam:PF01247
            ProDom:PD012670 PROSITE:PS01105 dictyBase:DDB_G0270424
            EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 GO:GO:0000049 InterPro:IPR009000
            SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451 PANTHER:PTHR10902
            OMA:FYVGKRC RefSeq:XP_646794.1 HSSP:Q8TZV6
            ProteinModelPortal:Q55BN7 STRING:Q55BN7 PRIDE:Q55BN7
            EnsemblProtists:DDB0231153 GeneID:8617767 KEGG:ddi:DDB_G0270424
            ProtClustDB:PTZ00041 Uniprot:Q55BN7
        Length = 105

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 46/103 (44%), Positives = 70/103 (67%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEA---------------KTKKNGTHY 55
             K+Y +G +LGY+RS++ QYPN SLI+I+GV  +E++               K+ KN T +
Sbjct:     3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAKNPTGH 62

Query:    56 RCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             +  WGK+ ++H +SGVV+A+F  NLPPK++G  VRV +YP+NI
Sbjct:    63 KISWGKICKTHGSSGVVQARFARNLPPKAMGAPVRVMLYPSNI 105


>UNIPROTKB|F1NQ35 [details] [associations]
            symbol:RPL35A "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0006364
            "rRNA processing" evidence=IEA] [GO:0022625 "cytosolic large
            ribosomal subunit" evidence=IEA] [GO:0042273 "ribosomal large
            subunit biogenesis" evidence=IEA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            GO:GO:0006412 GO:GO:0003735 GO:GO:0042273 GO:GO:0006364
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 PANTHER:PTHR10902
            OMA:FYVGKRC GeneTree:ENSGT00390000016972 EMBL:AADN02020638
            IPI:IPI00576833 Ensembl:ENSGALT00000012307 Uniprot:F1NQ35
        Length = 113

 Score = 165 (63.1 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
 Identities = 31/50 (62%), Positives = 39/50 (78%)

Query:    49 KKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             K N T  R IWGKV R+H NSG+VRAKF+SNLP K++G R+RV +YP+ I
Sbjct:    66 KPNRT--RVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 113

 Score = 77 (32.2 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
 Identities = 14/37 (37%), Positives = 25/37 (67%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAK 47
             +L+ + T  GYKR   NQ  +T+L++I+GV  ++E +
Sbjct:     7 RLWCKATFAGYKRGLRNQREHTALLKIEGVYARQETE 43


>WB|WBGene00004447 [details] [associations]
            symbol:rpl-33 species:6239 "Caenorhabditis elegans"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040010
            "positive regulation of growth rate" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0040017 "positive regulation of locomotion" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
            evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247
            ProDom:PD012670 PROSITE:PS01105 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0006412 GO:GO:0040017
            GO:GO:0000003 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
            SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451 HOGENOM:HOG000195636
            PANTHER:PTHR10902 OMA:FYVGKRC GeneTree:ENSGT00390000016972
            EMBL:FO081111 PIR:T34207 RefSeq:NP_495468.1
            ProteinModelPortal:P49180 SMR:P49180 STRING:P49180 PaxDb:P49180
            EnsemblMetazoa:F10E7.7.1 EnsemblMetazoa:F10E7.7.2 GeneID:174166
            KEGG:cel:CELE_F10E7.7 UCSC:F10E7.7.1 CTD:174166 WormBase:F10E7.7
            InParanoid:P49180 NextBio:882813 Uniprot:P49180
        Length = 124

 Score = 163 (62.4 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query:    43 KEEAKTKKNG----THYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             K   KT K G    T  R IWGK+ R H N+G VRAKF  N+PP ++G R+RV +YP+NI
Sbjct:    65 KAHNKTLKTGHTVATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLYPSNI 124

 Score = 75 (31.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 15/36 (41%), Positives = 24/36 (66%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEA 46
             +LYV+    G+KR    Q  +TSL++++GV  KE+A
Sbjct:    17 RLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDA 52


>RGD|628793 [details] [associations]
            symbol:Rpl35a "ribosomal protein L35a" species:10116 "Rattus
            norvegicus" [GO:0000049 "tRNA binding" evidence=TAS] [GO:0003735
            "structural constituent of ribosome" evidence=TAS] [GO:0005739
            "mitochondrion" evidence=ISO] [GO:0005840 "ribosome" evidence=TAS]
            [GO:0006364 "rRNA processing" evidence=ISO] [GO:0006412
            "translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=ISO] [GO:0042273 "ribosomal large subunit
            biogenesis" evidence=ISO] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 RGD:628793
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
            InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451
            HOGENOM:HOG000195636 PANTHER:PTHR10902 OMA:FYVGKRC
            GeneTree:ENSGT00390000016972 CTD:6165 HOVERGEN:HBG054581
            OrthoDB:EOG4FR0T3 EMBL:X03475 EMBL:BC061557 IPI:IPI00197720
            PIR:A25404 RefSeq:NP_067087.1 RefSeq:XP_002725811.1
            RefSeq:XP_002726700.1 RefSeq:XP_002727940.1 RefSeq:XP_002727941.1
            RefSeq:XP_002727942.1 RefSeq:XP_002728899.1 RefSeq:XP_002729606.1
            RefSeq:XP_003751166.1 RefSeq:XP_003752544.1 RefSeq:XP_003752545.1
            RefSeq:XP_003752546.1 UniGene:Rn.156479 UniGene:Rn.2812
            ProteinModelPortal:P04646 SMR:P04646 STRING:P04646 PRIDE:P04646
            Ensembl:ENSRNOT00000040261 Ensembl:ENSRNOT00000042285
            Ensembl:ENSRNOT00000050438 Ensembl:ENSRNOT00000059047
            GeneID:100359498 GeneID:100359825 GeneID:100361473 GeneID:100910496
            GeneID:57809 KEGG:rno:100359498 KEGG:rno:100359825
            KEGG:rno:100361473 KEGG:rno:100910496 KEGG:rno:57809
            UCSC:RGD:628793 InParanoid:P04646 NextBio:611330
            Genevestigator:P04646 GermOnline:ENSRNOG00000029454
            GermOnline:ENSRNOG00000031641 GermOnline:ENSRNOG00000032303
            GermOnline:ENSRNOG00000038678 Uniprot:P04646
        Length = 110

 Score = 165 (63.1 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
 Identities = 31/50 (62%), Positives = 39/50 (78%)

Query:    49 KKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             K N T  R IWGKV R+H NSG+VRAKF+SNLP K++G R+RV +YP+ I
Sbjct:    63 KPNKT--RVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110

 Score = 71 (30.1 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
 Identities = 13/37 (35%), Positives = 24/37 (64%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAK 47
             +L+ +    GYKR   NQ  +T+L++I+GV  ++E +
Sbjct:     4 RLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETE 40


>UNIPROTKB|E2QYD8 [details] [associations]
            symbol:RPL35A "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006412 "translation" evidence=IEA]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            GO:GO:0006412 GO:GO:0003735 GO:GO:0042273 GO:GO:0006364
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 KO:K02917
            PANTHER:PTHR10902 OMA:FYVGKRC GeneTree:ENSGT00390000016972 CTD:6165
            EMBL:AAEX03017077 RefSeq:XP_535773.1 RefSeq:XP_858367.1
            ProteinModelPortal:E2QYD8 SMR:E2QYD8 PRIDE:E2QYD8
            Ensembl:ENSCAFT00000020171 GeneID:478597 KEGG:cfa:478597
            NextBio:20853914 Uniprot:E2QYD8
        Length = 110

 Score = 165 (63.1 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 31/50 (62%), Positives = 39/50 (78%)

Query:    49 KKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             K N T  R IWGKV R+H NSG+VRAKF+SNLP K++G R+RV +YP+ I
Sbjct:    63 KPNKT--RVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110

 Score = 70 (29.7 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 13/37 (35%), Positives = 24/37 (64%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAK 47
             +L+ +    GYKR   NQ  +T+L++I+GV  ++E +
Sbjct:     4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETE 40


>UNIPROTKB|P18077 [details] [associations]
            symbol:RPL35A "60S ribosomal protein L35a" species:9606
            "Homo sapiens" [GO:0000049 "tRNA binding" evidence=IEA] [GO:0006364
            "rRNA processing" evidence=IMP] [GO:0042273 "ribosomal large
            subunit biogenesis" evidence=IMP] [GO:0006412 "translation"
            evidence=NAS;TAS] [GO:0003735 "structural constituent of ribosome"
            evidence=NAS] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=TAS] [GO:0005829
            "cytosol" evidence=TAS] [GO:0006413 "translational initiation"
            evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS]
            [GO:0006415 "translational termination" evidence=TAS] [GO:0006614
            "SRP-dependent cotranslational protein targeting to membrane"
            evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
            [GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019058 "viral infectious cycle"
            evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
            [GO:0044267 "cellular protein metabolic process" evidence=TAS]
            Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413
            GO:GO:0003735 GO:GO:0042273 GO:GO:0000049 GO:GO:0006364
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0006415 GO:GO:0006414
            Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625 KO:K02917
            GO:GO:0019083 eggNOG:COG2451 HOGENOM:HOG000195636 PANTHER:PTHR10902
            OMA:FYVGKRC Orphanet:124 CTD:6165 HOVERGEN:HBG054581
            OrthoDB:EOG4FR0T3 EMBL:X52966 EMBL:AY871273 EMBL:CH471252
            EMBL:BC001037 EMBL:BC010949 EMBL:BC017093 EMBL:BC061890 EMBL:X94619
            IPI:IPI00029731 PIR:S12710 RefSeq:NP_000987.2 UniGene:Hs.529631
            ProteinModelPortal:P18077 SMR:P18077 IntAct:P18077
            MINT:MINT-1163509 STRING:P18077 PhosphoSite:P18077 DMDM:22002061
            SWISS-2DPAGE:P18077 PaxDb:P18077 PRIDE:P18077 DNASU:6165
            Ensembl:ENST00000448864 Ensembl:ENST00000464167 GeneID:6165
            KEGG:hsa:6165 UCSC:uc003fyr.3 GeneCards:GC03P197676
            H-InvDB:HIX0005661 H-InvDB:HIX0163429 H-InvDB:HIX0170318
            H-InvDB:HIX0170319 HGNC:HGNC:10345 MIM:180468 MIM:612528
            neXtProt:NX_P18077 PharmGKB:PA34728 InParanoid:P18077
            PhylomeDB:P18077 GenomeRNAi:6165 NextBio:23949 ArrayExpress:P18077
            Bgee:P18077 CleanEx:HS_RPL35A Genevestigator:P18077
            GermOnline:ENSG00000182899 Uniprot:P18077
        Length = 110

 Score = 165 (63.1 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 31/50 (62%), Positives = 39/50 (78%)

Query:    49 KKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             K N T  R IWGKV R+H NSG+VRAKF+SNLP K++G R+RV +YP+ I
Sbjct:    63 KPNKT--RVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110

 Score = 70 (29.7 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 13/37 (35%), Positives = 24/37 (64%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAK 47
             +L+ +    GYKR   NQ  +T+L++I+GV  ++E +
Sbjct:     4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETE 40


>UNIPROTKB|F2Z5Q8 [details] [associations]
            symbol:RPL35A "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
            GO:GO:0003735 GO:GO:0042273 GO:GO:0006364 InterPro:IPR009000
            SUPFAM:SSF50447 GO:GO:0022625 KO:K02917 PANTHER:PTHR10902
            OMA:FYVGKRC GeneTree:ENSGT00390000016972 EMBL:CU694544
            EMBL:CU640404 RefSeq:XP_003357274.1 RefSeq:XP_003358821.1
            RefSeq:XP_003358822.1 SMR:F2Z5Q8 Ensembl:ENSSSCT00000012969
            Ensembl:ENSSSCT00000016266 GeneID:100514796 GeneID:100519675
            KEGG:ssc:100514796 KEGG:ssc:100519675 Uniprot:F2Z5Q8
        Length = 110

 Score = 165 (63.1 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 31/50 (62%), Positives = 39/50 (78%)

Query:    49 KKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             K N T  R IWGKV R+H NSG+VRAKF+SNLP K++G R+RV +YP+ I
Sbjct:    63 KPNKT--RVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110

 Score = 70 (29.7 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 13/37 (35%), Positives = 24/37 (64%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAK 47
             +L+ +    GYKR   NQ  +T+L++I+GV  ++E +
Sbjct:     4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETE 40


>UNIPROTKB|Q56JY1 [details] [associations]
            symbol:RPL35A "60S ribosomal protein L35a" species:9913
            "Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0000049 "tRNA
            binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            GO:GO:0000049 InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917
            eggNOG:COG2451 HOGENOM:HOG000195636 PANTHER:PTHR10902 OMA:FYVGKRC
            GeneTree:ENSGT00390000016972 EMBL:AY911347 EMBL:BC111654
            IPI:IPI00697014 RefSeq:NP_001020492.1 UniGene:Bt.15384
            UniGene:Bt.65591 ProteinModelPortal:Q56JY1 STRING:Q56JY1
            PRIDE:Q56JY1 Ensembl:ENSBTAT00000018888 GeneID:506768
            KEGG:bta:506768 CTD:6165 HOVERGEN:HBG054581 InParanoid:Q56JY1
            OrthoDB:EOG4FR0T3 NextBio:20867746 ArrayExpress:Q56JY1
            Uniprot:Q56JY1
        Length = 110

 Score = 164 (62.8 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
 Identities = 30/50 (60%), Positives = 39/50 (78%)

Query:    49 KKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             K N T  R IWGK+ R+H NSG+VRAKF+SNLP K++G R+RV +YP+ I
Sbjct:    63 KPNKT--RVIWGKITRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110

 Score = 70 (29.7 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
 Identities = 13/37 (35%), Positives = 24/37 (64%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAK 47
             +L+ +    GYKR   NQ  +T+L++I+GV  ++E +
Sbjct:     4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETE 40


>ASPGD|ASPL0000041158 [details] [associations]
            symbol:AN2980 species:162425 "Emericella nidulans"
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0022625 "cytosolic large
            ribosomal subunit" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0002181 "cytoplasmic
            translation" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
            EMBL:BN001306 GO:GO:0005840 EMBL:AACD01000051 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451
            HOGENOM:HOG000195636 PANTHER:PTHR10902 OMA:FYVGKRC
            OrthoDB:EOG4BP4NF RefSeq:XP_660584.1 ProteinModelPortal:Q5B900
            STRING:Q5B900 EnsemblFungi:CADANIAT00010100 GeneID:2874180
            KEGG:ani:AN2980.2 Uniprot:Q5B900
        Length = 109

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 51/102 (50%), Positives = 63/102 (61%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKE--------------EAKTKKNGTHYR 56
             +LYV+G  L Y+RSK    PNTSLI+I GV+  E               AK +  G++ R
Sbjct:     8 RLYVKGRHLSYQRSKRAVNPNTSLIKIDGVDNTEAANFYLGKKVAFVYRAKREVRGSNIR 67

Query:    57 CIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
              IWGKV R H NSGVVRA+F+ NLP KS G  VRV +YP+NI
Sbjct:    68 VIWGKVTRPHGNSGVVRAQFRHNLPAKSFGATVRVMLYPSNI 109


>RGD|2318348 [details] [associations]
            symbol:LOC100362338 "ribosomal protein L35a-like" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            RGD:2318348 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902 OMA:CAKFRSN
            GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 IPI:IPI00400634
            RefSeq:XP_002728500.1 RefSeq:XP_003752996.1
            ProteinModelPortal:D3ZZN4 Ensembl:ENSRNOT00000043796
            GeneID:100362338 KEGG:rno:100362338 Uniprot:D3ZZN4
        Length = 110

 Score = 160 (61.4 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
 Identities = 30/50 (60%), Positives = 38/50 (76%)

Query:    49 KKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             K N T  R IWGKV R+H NSG+VRAKF+ NLP K++G R+RV +YP+ I
Sbjct:    63 KPNKT--RVIWGKVTRAHGNSGMVRAKFRRNLPAKAIGHRIRVMLYPSRI 110

 Score = 71 (30.1 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
 Identities = 13/37 (35%), Positives = 24/37 (64%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAK 47
             +L+ +    GYKR   NQ  +T+L++I+GV  ++E +
Sbjct:     4 RLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETE 40


>RGD|2323736 [details] [associations]
            symbol:LOC100362957 "ribosomal protein L35a-like" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            RGD:2323736 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
            GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 OMA:GERCAYV
            IPI:IPI00207615 RefSeq:XP_002729247.1 RefSeq:XP_003753801.1
            ProteinModelPortal:D3ZYY1 PRIDE:D3ZYY1 Ensembl:ENSRNOT00000043508
            GeneID:100362957 KEGG:rno:100362957 UCSC:RGD:2323736 Uniprot:D3ZYY1
        Length = 110

 Score = 165 (63.1 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
 Identities = 31/50 (62%), Positives = 39/50 (78%)

Query:    49 KKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             K N T  R IWGKV R+H NSG+VRAKF+SNLP K++G R+RV +YP+ I
Sbjct:    63 KPNKT--RVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110

 Score = 65 (27.9 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
 Identities = 12/37 (32%), Positives = 23/37 (62%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAK 47
             +L+ +     YKR   NQ  +T+L++I+GV  ++E +
Sbjct:     4 RLWCKAIFAAYKRGLRNQREHTTLLKIEGVYARDETE 40


>SGD|S000005760 [details] [associations]
            symbol:RPL33B "Ribosomal 60S subunit protein L33B"
            species:4932 "Saccharomyces cerevisiae" [GO:0005840 "ribosome"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA;IDA] [GO:0002181
            "cytoplasmic translation" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            SGD:S000005760 EMBL:BK006948 GO:GO:0003735 GO:GO:0002181
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 RefSeq:NP_014877.3
            GeneID:854409 KEGG:sce:YOR234C KO:K02917 RefSeq:NP_014880.3
            GeneID:854412 KEGG:sce:YOR237W eggNOG:COG2451 HOGENOM:HOG000195636
            PANTHER:PTHR10902 OMA:FYVGKRC OrthoDB:EOG4BP4NF
            GeneTree:ENSGT00390000016972 EMBL:L23923 EMBL:Z75142 PIR:S44069
            ProteinModelPortal:P41056 SMR:P41056 IntAct:P41056 STRING:P41056
            PaxDb:P41056 PeptideAtlas:P41056 EnsemblFungi:YOR234C
            NextBio:976598 Genevestigator:P41056 GermOnline:YOR234C
            Uniprot:P41056
        Length = 107

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 49/105 (46%), Positives = 67/105 (63%)

Query:     8 ERIKLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAK-------------TKK-NGT 53
             E  +LYV+G  L Y+RSK    PN SLI+I+GV   +EA+             +K+  G+
Sbjct:     3 ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGS 62

Query:    54 HYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
               R +WGKV R+H NSGVVRA F++NLP K+ G  VR+F+YP+NI
Sbjct:    63 KIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107


>ZFIN|ZDB-GENE-040718-190 [details] [associations]
            symbol:rpl35a "ribosomal protein L35a" species:7955
            "Danio rerio" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0009790 "embryo development" evidence=IMP] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            ZFIN:ZDB-GENE-040718-190 GO:GO:0006412 GO:GO:0005840 GO:GO:0009790
            GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917
            HOGENOM:HOG000195636 PANTHER:PTHR10902 GeneTree:ENSGT00390000016972
            CTD:6165 HOVERGEN:HBG054581 EMBL:FP017147 EMBL:CU896647
            EMBL:BC076321 IPI:IPI00508277 RefSeq:NP_001002487.1 UniGene:Dr.1432
            Ensembl:ENSDART00000121770 Ensembl:ENSDART00000147185 GeneID:436760
            KEGG:dre:436760 InParanoid:Q6DGM0 NextBio:20831197 Uniprot:Q6DGM0
        Length = 110

 Score = 167 (63.8 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
 Identities = 31/50 (62%), Positives = 39/50 (78%)

Query:    49 KKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             K N T  R IWGKV R+H NSG+VRAKFKSNLP K++G R+RV +YP+ +
Sbjct:    63 KPNKT--RVIWGKVTRAHGNSGMVRAKFKSNLPAKAIGHRIRVMLYPSRV 110

 Score = 61 (26.5 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
 Identities = 11/30 (36%), Positives = 20/30 (66%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGV 40
             +L+ +    GYKR   NQ  +T+L++++GV
Sbjct:     4 RLWSKAIFAGYKRGLRNQREHTALLKLEGV 33


>SGD|S000006064 [details] [associations]
            symbol:RPL33A "Ribosomal 60S subunit protein L33A"
            species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0002181 "cytoplasmic translation"
            evidence=IDA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA;IDA] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0022625
            "cytosolic large ribosomal subunit" evidence=IDA]
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 SGD:S000006064 EMBL:BK006949 GO:GO:0003735
            GO:GO:0002181 PDB:4B6A PDBsum:4B6A InterPro:IPR009000
            SUPFAM:SSF50447 EMBL:U43703 GO:GO:0022625 KO:K02917
            HOGENOM:HOG000195636 OMA:ISYQRSK PANTHER:PTHR10902 PDB:3IZS
            PDB:3U5E PDB:3U5I PDBsum:3IZS PDBsum:3U5E PDBsum:3U5I
            OrthoDB:EOG4BP4NF EMBL:X57969 EMBL:Z73499 PIR:S18431
            RefSeq:NP_015182.1 ProteinModelPortal:P05744 SMR:P05744
            IntAct:P05744 STRING:P05744 PeptideAtlas:P05744
            EnsemblFungi:YPL143W GeneID:855960 KEGG:sce:YPL143W
            GeneTree:ENSGT00390000016972 NextBio:980759 Genevestigator:P05744
            GermOnline:YPL143W Uniprot:P05744
        Length = 107

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 48/105 (45%), Positives = 67/105 (63%)

Query:     8 ERIKLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAK-------------TKK-NGT 53
             E  +LYV+G  L Y+RSK    PN SLI+I+GV   ++A+             +K+  G+
Sbjct:     3 ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQDAQFYLGKRIAYVYRASKEVRGS 62

Query:    54 HYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
               R +WGKV R+H NSGVVRA F++NLP K+ G  VR+F+YP+NI
Sbjct:    63 KIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107


>UNIPROTKB|E1BMJ8 [details] [associations]
            symbol:LOC781576 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
            PANTHER:PTHR10902 GeneTree:ENSGT00390000016972 EMBL:DAAA02008240
            IPI:IPI00826854 RefSeq:XP_003582043.1 RefSeq:XP_003582044.1
            RefSeq:XP_003585932.1 RefSeq:XP_003585933.1
            ProteinModelPortal:E1BMJ8 Ensembl:ENSBTAT00000043998 GeneID:781576
            KEGG:bta:781576 OMA:GERCAYV Uniprot:E1BMJ8
        Length = 110

 Score = 164 (62.8 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
 Identities = 30/50 (60%), Positives = 39/50 (78%)

Query:    49 KKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             K N T  R IWGK+ R+H NSG+VRAKF+SNLP K++G R+RV +YP+ I
Sbjct:    63 KPNKT--RVIWGKITRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110

 Score = 59 (25.8 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
 Identities = 11/30 (36%), Positives = 19/30 (63%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGV 40
             +L+ +    GYKR   NQ  +T+ ++I+GV
Sbjct:     4 RLWSKAIFAGYKRGLRNQREHTAFLKIEGV 33


>POMBASE|SPBC1921.01c [details] [associations]
            symbol:rpl35b "60S ribosomal protein L35a (predicted)"
            species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
            translation" evidence=NAS] [GO:0003735 "structural constituent of
            ribosome" evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
            evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISS]
            [GO:0019843 "rRNA binding" evidence=ISS] [GO:0022625 "cytosolic
            large ribosomal subunit" evidence=ISO] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            PomBase:SPBC1921.01c GO:GO:0005730 EMBL:CU329671 GO:GO:0008270
            GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0019843
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 KO:K02917
            eggNOG:COG2451 HOGENOM:HOG000195636 OMA:ISYQRSK PANTHER:PTHR10902
            PIR:T39785 RefSeq:NP_001018813.2 ProteinModelPortal:Q9USX4
            STRING:Q9USX4 PRIDE:Q9USX4 EnsemblFungi:SPBC1921.01c.1
            GeneID:3361295 KEGG:spo:SPBC1921.01c OrthoDB:EOG4BP4NF
            NextBio:20811381 Uniprot:Q9USX4
        Length = 108

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 49/107 (45%), Positives = 66/107 (61%)

Query:     6 QGERIKLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEA------------KTKK--N 51
             QG R  LYV+   L ++RSK   +P TSL++I+G + KEEA            K+ K   
Sbjct:     4 QGHR--LYVKAKHLSFQRSKHVIHPGTSLVKIEGCDSKEEAQFYLGKRICFVYKSNKPVR 61

Query:    52 GTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             G+  R IWG V+R H NSGVVRA+F  NLPPK+ G  +RV +YP+N+
Sbjct:    62 GSKIRVIWGTVSRPHGNSGVVRARFTHNLPPKTFGASLRVMLYPSNV 108


>RGD|2325092 [details] [associations]
            symbol:LOC100359636 "ribosomal protein L35a-like" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
            Pfam:PF01247 ProDom:PD012670 RGD:2325092 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
            PANTHER:PTHR10902 OMA:HRIRVVI OrthoDB:EOG4FR0T3 IPI:IPI00392735
            RefSeq:XP_002728707.1 RefSeq:XP_003753232.1
            ProteinModelPortal:D3ZRV7 Ensembl:ENSRNOT00000045599
            GeneID:100359636 KEGG:rno:100359636 UCSC:RGD:2325092 Uniprot:D3ZRV7
        Length = 110

 Score = 147 (56.8 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
 Identities = 29/50 (58%), Positives = 36/50 (72%)

Query:    49 KKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             K N T  R IWGK  R+H NSG+VRAKF+SNLP K+ G R+ V +YP+ I
Sbjct:    63 KPNKT--RVIWGKETRAHGNSGMVRAKFQSNLPAKATGHRICVMLYPSRI 110

 Score = 71 (30.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
 Identities = 13/37 (35%), Positives = 24/37 (64%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAK 47
             +L+ +    GYKR   NQ  +T+L++I+GV  ++E +
Sbjct:     4 RLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETE 40


>FB|FBgn0037328 [details] [associations]
            symbol:RpL35A "Ribosomal protein L35A" species:7227
            "Drosophila melanogaster" [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0003735 "structural constituent of ribosome" evidence=ISS;IDA]
            [GO:0005840 "ribosome" evidence=IDA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            EMBL:AE014297 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451
            PANTHER:PTHR10902 OMA:FYVGKRC GeneTree:ENSGT00390000016972 CTD:6165
            EMBL:AY071136 EMBL:AY071732 RefSeq:NP_649539.1 UniGene:Dm.1069
            SMR:Q9VNB9 MINT:MINT-944394 STRING:Q9VNB9
            EnsemblMetazoa:FBtr0078769 GeneID:40654 KEGG:dme:Dmel_CG2099
            UCSC:CG2099-RA FlyBase:FBgn0037328 InParanoid:Q9VNB9
            OrthoDB:EOG42RBQR ChiTaRS:RPL35A GenomeRNAi:40654 NextBio:819867
            Uniprot:Q9VNB9
        Length = 157

 Score = 140 (54.3 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query:    53 THYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             T  R +WGKV R H N+G VRA+F  NLP  ++G R+R+ +YP+ I
Sbjct:   112 TRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 157

 Score = 76 (31.8 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
 Identities = 16/52 (30%), Positives = 31/52 (59%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAKTKKNGTHY---RCIW 59
             +L+ +    GYKR   NQ+ N ++++I+G      A+ K++G+ Y   RC++
Sbjct:    49 RLFAKAVFTGYKRGLRNQHENQAILKIEG------ARRKEHGSFYVGKRCVY 94


>POMBASE|SPCP31B10.08c [details] [associations]
            symbol:rpl35a "60S ribosomal protein L35a"
            species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
            translation" evidence=NAS] [GO:0003735 "structural constituent of
            ribosome" evidence=ISO] [GO:0006412 "translation" evidence=ISO]
            [GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 PomBase:SPCP31B10.08c EMBL:CU329672
            GenomeReviews:CU329672_GR GO:GO:0003735 GO:GO:0002181
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 KO:K02917
            eggNOG:COG2451 HOGENOM:HOG000195636 PANTHER:PTHR10902 OMA:CAKFRSN
            OrthoDB:EOG4BP4NF EMBL:AB017603 PIR:T41698 RefSeq:NP_587864.1
            ProteinModelPortal:Q9USG6 STRING:Q9USG6 PRIDE:Q9USG6
            EnsemblFungi:SPCP31B10.08c.1 GeneID:2539518 KEGG:spo:SPCP31B10.08c
            NextBio:20800679 Uniprot:Q9USG6
        Length = 108

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 47/107 (43%), Positives = 64/107 (59%)

Query:     6 QGERIKLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEA------------KTKK--N 51
             QG R  LYV+   L ++RSK   +P TS+++I+G + KEEA            K+ K   
Sbjct:     4 QGHR--LYVKAKHLSFQRSKHVIHPGTSIVKIEGCDSKEEAQFYLGKRVCYVYKSSKAVR 61

Query:    52 GTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             G+  R IWG +AR H NSG VRA+F  NLP K+ G  +RV +YP+NI
Sbjct:    62 GSKIRVIWGTIARPHGNSGAVRARFVHNLPAKTFGSSLRVMLYPSNI 108


>RGD|6498396 [details] [associations]
            symbol:LOC100910496 "60S ribosomal protein L35a-like"
            species:10116 "Rattus norvegicus" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
            IPI:IPI00559832 Ensembl:ENSRNOT00000050968 Uniprot:F1M2L1
        Length = 105

 Score = 165 (63.1 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
 Identities = 31/50 (62%), Positives = 39/50 (78%)

Query:    49 KKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             K N T  R IWGKV R+H NSG+VRAKF+SNLP K++G R+RV +YP+ I
Sbjct:    58 KPNKT--RVIWGKVTRAHGNSGMVRAKFRSNLPEKAIGHRIRVMLYPSRI 105

 Score = 47 (21.6 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query:    20 GYKRSKSNQYPNTS-LIQIKGVNIKEEAK 47
             GYKR   NQ  +T+ L++++GV   +E +
Sbjct:     7 GYKRGLWNQREHTAALLKMEGVYATDETE 35


>UNIPROTKB|G4MRJ2 [details] [associations]
            symbol:MGG_09927 "60S ribosomal protein L33-B"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 EMBL:CM001231 GO:GO:0043581
            InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917 PANTHER:PTHR10902
            RefSeq:XP_003710027.1 ProteinModelPortal:G4MRJ2
            EnsemblFungi:MGG_09927T0 GeneID:2680897 KEGG:mgr:MGG_09927
            Uniprot:G4MRJ2
        Length = 109

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 47/102 (46%), Positives = 60/102 (58%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAKT---KK-----------NGTHYR 56
             +LYV+G  L Y+RS+    P TSLI+I+GV+    A     KK            GT  R
Sbjct:     8 RLYVKGRHLSYQRSRHTNRPETSLIKIEGVDDTNAANFYLGKKVAYVYRAQKEVRGTKIR 67

Query:    57 CIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
              IWGKV R H NSGVVRAKF + LP +S G  VR+ +YP++I
Sbjct:    68 VIWGKVTRPHGNSGVVRAKFTTPLPTRSFGASVRIMLYPSSI 109


>UNIPROTKB|J9P9Q2 [details] [associations]
            symbol:J9P9Q2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006412 "translation" evidence=IEA]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] InterPro:IPR001780
            Pfam:PF01247 ProDom:PD012670 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
            GeneTree:ENSGT00390000016972 EMBL:AAEX03004458
            Ensembl:ENSCAFT00000015491 Uniprot:J9P9Q2
        Length = 110

 Score = 143 (55.4 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
 Identities = 24/43 (55%), Positives = 33/43 (76%)

Query:    56 RCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             R IWGKV  +H +SG+V  KF+SNLP K++G R+RV +YP+ I
Sbjct:    68 RVIWGKVTHAHGSSGMVHTKFRSNLPGKAIGHRIRVMLYPSRI 110

 Score = 57 (25.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAK 47
             +L+ +    GYK    NQ  +T+ ++IKGV   +E +
Sbjct:     4 RLWSKAIFAGYKWGLQNQREHTAPLKIKGVYAPDETE 40


>UNIPROTKB|C9K025 [details] [associations]
            symbol:RPL35A "60S ribosomal protein L35a" species:9606
            "Homo sapiens" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
            EMBL:AC135893 PANTHER:PTHR10902 HGNC:HGNC:10345 IPI:IPI00793102
            ProteinModelPortal:C9K025 SMR:C9K025 STRING:C9K025 PRIDE:C9K025
            Ensembl:ENST00000442341 ArrayExpress:C9K025 Bgee:C9K025
            Uniprot:C9K025
        Length = 94

 Score = 114 (45.2 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
 Identities = 23/33 (69%), Positives = 26/33 (78%)

Query:    49 KKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLP 81
             K N T  R IWGKV R+H NSG+VRAKF+SNLP
Sbjct:    63 KPNKT--RVIWGKVTRAHGNSGMVRAKFRSNLP 93

 Score = 70 (29.7 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
 Identities = 13/37 (35%), Positives = 24/37 (64%)

Query:    11 KLYVRGTILGYKRSKSNQYPNTSLIQIKGVNIKEEAK 47
             +L+ +    GYKR   NQ  +T+L++I+GV  ++E +
Sbjct:     4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETE 40


>RGD|2318932 [details] [associations]
            symbol:LOC100362049 "ribosomal protein L35a-like" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            RGD:2318932 RGD:2323316 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 OMA:ISYQRSK PANTHER:PTHR10902
            GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 IPI:IPI00476633
            RefSeq:XP_002726801.1 RefSeq:XP_002729684.1
            ProteinModelPortal:D4A771 PRIDE:D4A771 Ensembl:ENSRNOT00000043587
            GeneID:100362049 KEGG:rno:100362049 UCSC:RGD:2318932 Uniprot:D4A771
        Length = 110

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 36/79 (45%), Positives = 48/79 (60%)

Query:    21 YKRSKSNQYPNTSLIQI-KGVNIKEEAKTKKNGTHYRCIWGKVARSHSNSGVVRAKFKSN 79
             Y R ++  Y       + K  N      +K N T  R IWGKV R+H NSG+VRAKF+SN
Sbjct:    34 YARDETEFYLGKRCAYVYKAKNNTVTPGSKPNKT--RVIWGKVTRAHGNSGMVRAKFRSN 91

Query:    80 LPPKSVGDRVRVFMYPNNI 98
             LP K++G R+RV +YP+ I
Sbjct:    92 LPAKAIGHRIRVMLYPSRI 110


>RGD|2323316 [details] [associations]
            symbol:LOC100359825 "ribosomal protein L35a-like" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            RGD:2318932 RGD:2323316 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 OMA:ISYQRSK PANTHER:PTHR10902
            GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 IPI:IPI00476633
            RefSeq:XP_002726801.1 RefSeq:XP_002729684.1
            ProteinModelPortal:D4A771 PRIDE:D4A771 Ensembl:ENSRNOT00000043587
            GeneID:100362049 KEGG:rno:100362049 UCSC:RGD:2318932 Uniprot:D4A771
        Length = 110

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 36/79 (45%), Positives = 48/79 (60%)

Query:    21 YKRSKSNQYPNTSLIQI-KGVNIKEEAKTKKNGTHYRCIWGKVARSHSNSGVVRAKFKSN 79
             Y R ++  Y       + K  N      +K N T  R IWGKV R+H NSG+VRAKF+SN
Sbjct:    34 YARDETEFYLGKRCAYVYKAKNNTVTPGSKPNKT--RVIWGKVTRAHGNSGMVRAKFRSN 91

Query:    80 LPPKSVGDRVRVFMYPNNI 98
             LP K++G R+RV +YP+ I
Sbjct:    92 LPAKAIGHRIRVMLYPSRI 110


>UNIPROTKB|E1BHM9 [details] [associations]
            symbol:E1BHM9 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
            PANTHER:PTHR10902 OMA:CAKFRSN GeneTree:ENSGT00390000016972
            EMBL:DAAA02036428 IPI:IPI00906373 Ensembl:ENSBTAT00000015544
            Uniprot:E1BHM9
        Length = 110

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 35/79 (44%), Positives = 47/79 (59%)

Query:    21 YKRSKSNQY-PNTSLIQIKGVNIKEEAKTKKNGTHYRCIWGKVARSHSNSGVVRAKFKSN 79
             Y R ++  Y       + K  N  E    K N T  R IWGK+ R+H NSG+V AKF+SN
Sbjct:    34 YARDETEFYLGKRCAYEYKAKNNTETPGGKPNKT--RVIWGKITRAHGNSGMVCAKFRSN 91

Query:    80 LPPKSVGDRVRVFMYPNNI 98
             LP K++G R+RV +YP+ I
Sbjct:    92 LPAKAIGHRIRVMLYPSRI 110


>RGD|1560900 [details] [associations]
            symbol:RGD1560900 "similar to ribosomal protein L35a"
            species:10116 "Rattus norvegicus" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 RGD:1560900 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
            GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 IPI:IPI00190408
            RefSeq:XP_003750919.1 RefSeq:XP_003752397.1 PRIDE:D4A329
            Ensembl:ENSRNOT00000049614 GeneID:100911973 KEGG:rno:100911973
            OMA:STEAANF Uniprot:D4A329
        Length = 110

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 35/79 (44%), Positives = 46/79 (58%)

Query:    21 YKRSKSNQYPNTSLIQI-KGVNIKEEAKTKKNGTHYRCIWGKVARSHSNSGVVRAKFKSN 79
             Y R ++  Y       + K  N       K N T  R IWGKV R+H NSG+VRAKF+SN
Sbjct:    34 YARDETEFYSGKRCAYVYKAQNNTVTPGGKPNKT--RVIWGKVTRAHGNSGMVRAKFRSN 91

Query:    80 LPPKSVGDRVRVFMYPNNI 98
             LP K++G  +RV +YP+ I
Sbjct:    92 LPAKAIGHGIRVMLYPSRI 110


>RGD|1597244 [details] [associations]
            symbol:H60c "histocompatibility 60c" species:10116 "Rattus
            norvegicus" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 RGD:1597244
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
            SUPFAM:SSF50447 PANTHER:PTHR10902 IPI:IPI00765073
            Ensembl:ENSRNOT00000036970 Uniprot:D3ZFY4
        Length = 114

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 30/50 (60%), Positives = 37/50 (74%)

Query:    49 KKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFMYPNNI 98
             K N T  R IWGKV R+H NSGVVRAKF+S LP K++G R+R  +YP+ I
Sbjct:    67 KPNKT--RVIWGKVNRAHGNSGVVRAKFRSKLPAKAIGHRIRAMLYPSRI 114


>UNIPROTKB|F1M0T2 [details] [associations]
            symbol:F1M0T2 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
            Pfam:PF01247 ProDom:PD012670 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
            GeneTree:ENSGT00390000016972 IPI:IPI00198382
            Ensembl:ENSRNOT00000041291 OMA:GHRILVM Uniprot:F1M0T2
        Length = 107

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 32/79 (40%), Positives = 46/79 (58%)

Query:    21 YKRSKSNQYPNTSLIQI-KGVNIKEEAKTKKNGTHYRCIWGKVARSHSNSGVVRAKFKSN 79
             Y R ++  Y       + K  N       K N T  + IWGKV ++H NSG+VRAKF+S+
Sbjct:    31 YARDETEFYLGKGCAYVYKAKNNAVTPGGKPNKT--KVIWGKVTQAHGNSGMVRAKFRSS 88

Query:    80 LPPKSVGDRVRVFMYPNNI 98
             LP K++G R+ V +YP+ I
Sbjct:    89 LPAKAIGHRILVMLYPSRI 107


>UNIPROTKB|I3LIK0 [details] [associations]
            symbol:LOC100516261 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR001780 Pfam:PF01247
            ProDom:PD012670 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
            GeneTree:ENSGT00390000016972 EMBL:CU469011
            Ensembl:ENSSSCT00000006639 Uniprot:I3LIK0
        Length = 110

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 27/65 (41%), Positives = 40/65 (61%)

Query:    34 LIQIKGVNIKEEAKTKKNGTHYRCIWGKVARSHSNSGVVRAKFKSNLPPKSVGDRVRVFM 93
             + + K   +    K+KK     R  WGKV  ++ NSG+VRA F+SNLP K++G R+ V +
Sbjct:    50 MYKAKSNTVNPGRKSKKT----RIFWGKVTHANDNSGMVRATFQSNLPAKAIGHRIHVML 105

Query:    94 YPNNI 98
             YP+ I
Sbjct:   106 YPSRI 110


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       98        98   0.00091  102 3  11 22  0.41    30
                                                     29  0.45    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  36
  No. of states in DFA:  529 (56 KB)
  Total size of DFA:  104 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.83u 0.12s 9.95t   Elapsed:  00:00:00
  Total cpu time:  9.83u 0.12s 9.95t   Elapsed:  00:00:00
  Start:  Mon May 20 22:36:47 2013   End:  Mon May 20 22:36:47 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT1G74270 AT1G74270 AT1G74270	protein from Arabidopsis thaliana	1.1e-39
BLAST match view associations BLAST with AT1G07070 AT1G07070 AT1G07070	protein from Arabidopsis thaliana	2.3e-39
BLAST match view associations BLAST with AT1G41880 AT1G41880 AT1G41880	protein from Arabidopsis thaliana	2.6e-38
BLAST match view associations BLAST with AT3G55750 AT3G55750 AT3G55750	protein from Arabidopsis thaliana	3.4e-38
BLAST match view associations BLAST with PF11_0438 PF11_0438 PF11_0438 Ribosomal protein, putative	gene from Plasmodium falciparum	8.7e-24
BLAST match view associations BLAST with PF11_0438 PF11_0438 PF11_0438 60S ribosomal protein L35Ae, putative	protein from Plasmodium falciparum 3D7	8.7e-24
BLAST match view associations BLAST with rpl35a rpl35a rpl35a S60 ribosomal protein L35a	gene from Dictyostelium discoideum	3.1e-19
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Gallus gallus	5.0e-19
BLAST match view associations BLAST with rpl-33 rpl-33 rpl-33	gene from Caenorhabditis elegans	1.3e-18
BLAST match view associations BLAST with Rpl35a Rpl35a Rpl35a ribosomal protein L35a	gene from Rattus norvegicus	2.1e-18
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Canis lupus familiaris	2.7e-18
BLAST match view associations BLAST with RPL35A RPL35A RPL35A 60S ribosomal protein L35a	protein from Homo sapiens	2.7e-18
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Sus scrofa	2.7e-18
BLAST match view associations BLAST with RPL35A RPL35A RPL35A 60S ribosomal protein L35a	protein from Bos taurus	3.4e-18
BLAST match view associations BLAST with LOC100362338 LOC100362338 LOC100362338 ribosomal protein L35a-like	gene from Rattus norvegicus	7.0e-18
BLAST match view associations BLAST with RPL33B RPL33B RPL33B Ribosomal 60S subunit protein L33B	gene from Saccharomyces cerevisiae	9.5e-18
BLAST match view associations BLAST with rpl35a rpl35a rpl35a ribosomal protein L35a	gene_product from Danio rerio	1.4e-17
BLAST match view associations BLAST with RPL33A RPL33A RPL33A Ribosomal 60S subunit protein L33A	gene from Saccharomyces cerevisiae	2.0e-17
BLAST match view associations BLAST with LOC781576 LOC781576 LOC781576 Uncharacterized protein	protein from Bos taurus	4.8e-17
BLAST match view associations BLAST with RpL35A RpL35A RpL35A Ribosomal protein L35A	protein from Drosophila melanogaster	2.5e-16
BLAST match view associations BLAST with MGG_09927 MGG_09927 MGG_09927 60S ribosomal protein L33-B	protein from Magnaporthe oryzae 70-15	1.3e-15
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Canis lupus familiaris	1.2e-14
BLAST match view associations BLAST with RPL35A RPL35A RPL35A 60S ribosomal protein L35a	protein from Homo sapiens	5.3e-13
BLAST match view associations BLAST with LOC100362049 LOC100362049 LOC100362049 ribosomal protein L35a-like	gene from Rattus norvegicus	1.2e-12
BLAST match view associations BLAST with LOC100359825 LOC100359825 LOC100359825 ribosomal protein L35a-like	gene from Rattus norvegicus	1.2e-12
BLAST match view associations BLAST with E1BHM9 E1BHM9 E1BHM9 Uncharacterized protein	protein from Bos taurus	3.9e-12
BLAST match view associations BLAST with RGD1560900 RGD1560900 RGD1560900 similar to ribosomal protein L35a	gene from Rattus norvegicus	8.2e-12
BLAST match view associations BLAST with F1M0T2 F1M0T2 F1M0T2 Uncharacterized protein	protein from Rattus norvegicus	2.0e-10
BLAST match view associations BLAST with LOC100516261 LOC100516261 LOC100516261 Uncharacterized protein	protein from Sus scrofa	1.8e-09