BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040910
(496 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 176/302 (58%), Gaps = 16/302 (5%)
Query: 154 FSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMI 212
FSL + A+ NFS +N LG GGFG VYKG+L +G VAVKRL + QG E +F+ E+
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 213 LIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGIL 272
+I+ HRNL+RL G C+ E++L+Y YM N S+ L + P S+ L
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER-----------PESQPPL 136
Query: 273 DWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE 332
DW R RI G A+GL YLH + ++IHRD+KA+N+LLD + + DFG+A++ +
Sbjct: 137 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 196
Query: 333 LQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKN---TRFYNIDSLT 389
+ GT G+++PEY G S K+DVF +GV+LLE ++ ++ R N D +
Sbjct: 197 XHVXXA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 255
Query: 390 LLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIK 449
LL L K+ + L+D LQ V++ I+VALLC Q + +RP MSEVV M++
Sbjct: 256 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
Query: 450 NE 451
+
Sbjct: 316 GD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 174/302 (57%), Gaps = 16/302 (5%)
Query: 154 FSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMI 212
FSL + A+ NF +N LG GGFG VYKG+L +G VAVKRL + QG E +F+ E+
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 213 LIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGIL 272
+I+ HRNL+RL G C+ E++L+Y YM N S+ L + P S+ L
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER-----------PESQPPL 128
Query: 273 DWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE 332
DW R RI G A+GL YLH + ++IHRD+KA+N+LLD + + DFG+A++ +
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 188
Query: 333 LQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKN---TRFYNIDSLT 389
+ G G+++PEY G S K+DVF +GV+LLE ++ ++ R N D +
Sbjct: 189 XHVXXA-VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247
Query: 390 LLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIK 449
LL L K+ + L+D LQ V++ I+VALLC Q + +RP MSEVV M++
Sbjct: 248 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
Query: 450 NE 451
+
Sbjct: 308 GD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 172/293 (58%), Gaps = 19/293 (6%)
Query: 156 LASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIA 215
L + AT+NF + +G G FG VYKG L +G +VA+KR + +S QG+EEF+ E+ ++
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
H +LV L G C E+ E ILIY+YM N +L L+ G D+ T S W
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY------GSDLPTMSMS-----WE 139
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL-Q 334
R+ I G A+GL YLH + +IHRD+K+ N+LLD + PKI+DFGI++ G EL Q
Sbjct: 140 QRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELDQ 194
Query: 335 SNMNRIV-GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKN-TRFYNIDSLTLLG 392
+++ +V GT GY+ PEY + G + KSDV+SFGV+L E L ++ + + + L
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254
Query: 393 HAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
A + + +++DP L ++ ++++ A+ C+ ++ DRP+M +V+
Sbjct: 255 WAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 172/293 (58%), Gaps = 19/293 (6%)
Query: 156 LASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIA 215
L + AT+NF + +G G FG VYKG L +G +VA+KR + +S QG+EEF+ E+ ++
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
H +LV L G C E+ E ILIY+YM N +L L+ G D+ T S W
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY------GSDLPTMSMS-----WE 139
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL-Q 334
R+ I G A+GL YLH + +IHRD+K+ N+LLD + PKI+DFGI++ G EL Q
Sbjct: 140 QRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQ 194
Query: 335 SNMNRIV-GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKN-TRFYNIDSLTLLG 392
+++ +V GT GY+ PEY + G + KSDV+SFGV+L E L ++ + + + L
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254
Query: 393 HAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
A + + +++DP L ++ ++++ A+ C+ ++ DRP+M +V+
Sbjct: 255 WAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 154/312 (49%), Gaps = 28/312 (8%)
Query: 148 ESWFIFFSLASISTATHNFSEE------NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSG 201
++ F FS + T+NF E NK+GEGGFG VYKG +N VAVK+L+
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 67
Query: 202 QGVEE----FKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYS 257
EE F E+ ++AK H NLV L G + + L+Y YMPN SL
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---------- 117
Query: 258 SGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP 317
D ++ L W R +I +G A G+ +LH+ IHRD+K++N+LLD
Sbjct: 118 --LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 172
Query: 318 KISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
KISDFG+AR +RIVGT YM+PE AL G + KSD++SFGV+LLE ++
Sbjct: 173 KISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGL 231
Query: 378 KNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAAD 437
+ L L ++ +D + N+A V+ VA C+ E
Sbjct: 232 PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNK 290
Query: 438 RPTMSEVVSMIK 449
RP + +V +++
Sbjct: 291 RPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 153/312 (49%), Gaps = 28/312 (8%)
Query: 148 ESWFIFFSLASISTATHNFSEE------NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSG 201
++ F FS + T+NF E NK+GEGGFG VYKG +N VAVK+L+
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 67
Query: 202 QGVEE----FKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYS 257
EE F E+ ++AK H NLV L G + + L+Y YMPN SL
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---------- 117
Query: 258 SGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP 317
D ++ L W R +I +G A G+ +LH+ IHRD+K++N+LLD
Sbjct: 118 --LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 172
Query: 318 KISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
KISDFG+AR RIVGT YM+PE AL G + KSD++SFGV+LLE ++
Sbjct: 173 KISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGL 231
Query: 378 KNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAAD 437
+ L L ++ +D + N+A V+ VA C+ E
Sbjct: 232 PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNK 290
Query: 438 RPTMSEVVSMIK 449
RP + +V +++
Sbjct: 291 RPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 153/312 (49%), Gaps = 28/312 (8%)
Query: 148 ESWFIFFSLASISTATHNFSEE------NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSG 201
++ F FS + T+NF E NK+GEGGFG VYKG +N VAVK+L+
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 61
Query: 202 QGVEE----FKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYS 257
EE F E+ ++AK H NLV L G + + L+Y YMPN SL
Sbjct: 62 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---------- 111
Query: 258 SGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP 317
D ++ L W R +I +G A G+ +LH+ IHRD+K++N+LLD
Sbjct: 112 --LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 166
Query: 318 KISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
KISDFG+AR RIVGT YM+PE AL G + KSD++SFGV+LLE ++
Sbjct: 167 KISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGL 225
Query: 378 KNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAAD 437
+ L L ++ +D + N+A V+ VA C+ E
Sbjct: 226 PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNK 284
Query: 438 RPTMSEVVSMIK 449
RP + +V +++
Sbjct: 285 RPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 148/311 (47%), Gaps = 28/311 (9%)
Query: 149 SWFIFFSLASISTATHNFSEE------NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQ 202
+ F FS + T+NF E NK GEGGFG VYKG +N VAVK+L+
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDI 59
Query: 203 GVEE----FKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS 258
EE F E+ + AK H NLV L G + + L+Y Y PN SL
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL----------- 108
Query: 259 GFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPK 318
D ++ L W R +I +G A G+ +LH+ IHRD+K++N+LLD K
Sbjct: 109 -LDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAK 164
Query: 319 ISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKK 378
ISDFG+AR +RIVGT Y +PE AL G + KSD++SFGV+LLE ++
Sbjct: 165 ISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLP 223
Query: 379 NTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADR 438
+ L L ++ +D N+A V+ VA C+ E R
Sbjct: 224 AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKR 282
Query: 439 PTMSEVVSMIK 449
P + +V +++
Sbjct: 283 PDIKKVQQLLQ 293
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 117/228 (51%), Gaps = 13/228 (5%)
Query: 156 LASISTATHNFSEENKLGEGGFGPVYKGKLLN---GEE---VAVKRLSNKS-GQGVEEFK 208
L IS + F EE LGE FG VYKG L GE+ VA+K L +K+ G EEF+
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 209 NEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSL-DFFLFDYKYSSGFDMVTDPA 267
+E +L A+L H N+V L G + +I+ Y + L +F + +S D
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 268 SKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARM 327
K L+ V ++ IA G+ YL S V+H+DL NVL+ +N KISD G+ R
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 328 FGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+ + + +M+PE ++G FSI SD++S+GV+L E S
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 117/228 (51%), Gaps = 13/228 (5%)
Query: 156 LASISTATHNFSEENKLGEGGFGPVYKGKLLN---GEE---VAVKRLSNKS-GQGVEEFK 208
L IS + F EE LGE FG VYKG L GE+ VA+K L +K+ G EEF+
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 209 NEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSL-DFFLFDYKYSSGFDMVTDPA 267
+E +L A+L H N+V L G + +I+ Y + L +F + +S D
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 268 SKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARM 327
K L+ V ++ IA G+ YL S V+H+DL NVL+ +N KISD G+ R
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 328 FGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+ + + +M+PE ++G FSI SD++S+GV+L E S
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G +VAVK L S + F E L+ +L H+ LVRL+ +
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLY-AVV 85
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
Q +I EYM N SL FL K SG + + +LD + IA+G+ +
Sbjct: 86 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTIN----KLLDMAAQ------IAEGMAF 132
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ + + IHRDL+A+N+L+ ++ KI+DFG+AR+ +E + + +PE
Sbjct: 133 IEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPE 188
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
+G F+IKSDV+SFG+LL E ++ + +T NL +R ++++ P
Sbjct: 189 AINYGTFTIKSDVWSFGILLTEIVTHGR----IPYPGMTNPEVIQNL---ERGYRMVRPD 241
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
E LY +++ LC +E DRPT + S++++
Sbjct: 242 NCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLED 274
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G +VAVK L S + F E L+ +L H+ LVRL+ +
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 82
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
Q +I EYM N SL FL K SG + + +LD + IA+G+ +
Sbjct: 83 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTIN----KLLDMAAQ------IAEGMAF 129
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ + + IHRDL+A+N+L+ ++ KI+DFG+AR+ +E + + +PE
Sbjct: 130 IEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPE 185
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
+G F+IKSDV+SFG+LL E ++ + +T NL +R ++++ P
Sbjct: 186 AINYGTFTIKSDVWSFGILLTEIVTHGR----IPYPGMTNPEVIQNL---ERGYRMVRPD 238
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
E LY +++ LC +E DRPT + S++++
Sbjct: 239 NCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLED 271
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G +VAVK L S + F E L+ +L H+ LVRL+ +
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 83
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
Q +I EYM N SL FL K SG + + +LD + IA+G+ +
Sbjct: 84 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTIN----KLLDMAAQ------IAEGMAF 130
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ + + IHRDL+A+N+L+ ++ KI+DFG+AR+ +E + + +PE
Sbjct: 131 IEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPE 186
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
+G F+IKSDV+SFG+LL E ++ + +T NL +R ++++ P
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGR----IPYPGMTNPEVIQNL---ERGYRMVRPD 239
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
E LY +++ LC +E DRPT + S++++
Sbjct: 240 NCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLED 272
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G +VAVK L S + F E L+ +L H+ LVRL+ +
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLY-AVV 83
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
Q +I EYM N SL FL K SG + + +LD + IA+G+ +
Sbjct: 84 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTIN----KLLDMAAQ------IAEGMAF 130
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ + + IHRDL+A+N+L+ ++ KI+DFG+AR+ +E + + +PE
Sbjct: 131 IEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPE 186
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
+G F+IKSDV+SFG+LL E ++ + +T NL +R ++++ P
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGR----IPYPGMTNPEVIQNL---ERGYRMVRPD 239
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
E LY +++ LC +E DRPT + S++++
Sbjct: 240 NCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLED 272
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G +VAVK L S + F E L+ +L H+ LVRL+ +
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLY-AVV 87
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
Q +I EYM N SL FL K SG + + +LD + IA+G+ +
Sbjct: 88 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTIN----KLLDMAAQ------IAEGMAF 134
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ + + IHRDL+A+N+L+ ++ KI+DFG+AR+ +E + + +PE
Sbjct: 135 IEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPE 190
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
+G F+IKSDV+SFG+LL E ++ + +T NL +R ++++ P
Sbjct: 191 AINYGTFTIKSDVWSFGILLTEIVTHGR----IPYPGMTNPEVIQNL---ERGYRMVRPD 243
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
E LY +++ LC +E DRPT + S++++
Sbjct: 244 NCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLED 276
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G +VAVK L S + F E L+ +L H+ LVRL+ +
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 86
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
Q +I EYM N SL FL K SG + + +LD + IA+G+ +
Sbjct: 87 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTIN----KLLDMAAQ------IAEGMAF 133
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ + + IHRDL+A+N+L+ ++ KI+DFG+AR+ +E + + +PE
Sbjct: 134 IEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPE 189
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
+G F+IKSDV+SFG+LL E ++ + +T NL +R ++++ P
Sbjct: 190 AINYGTFTIKSDVWSFGILLTEIVTHGR----IPYPGMTNPEVIQNL---ERGYRMVRPD 242
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
E LY +++ LC +E DRPT + S++++
Sbjct: 243 NCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLED 275
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G +VAVK L S + F E L+ +L H+ LVRL+ +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
Q +I EYM N SL FL K SG + + +LD + IA+G+ +
Sbjct: 78 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTIN----KLLDMAAQ------IAEGMAF 124
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ + + IHRDL+A+N+L+ ++ KI+DFG+AR+ +E + + +PE
Sbjct: 125 IEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPE 180
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
+G F+IKSDV+SFG+LL E ++ + +T NL +R ++++ P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGR----IPYPGMTNPEVIQNL---ERGYRMVRPD 233
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
E LY +++ LC +E DRPT + S++++
Sbjct: 234 NCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLED 266
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G +VAVK L S + F E L+ +L H+ LVRL+ +
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 78
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
Q +I EYM N SL FL K SG + + +LD + IA+G+ +
Sbjct: 79 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTIN----KLLDMAAQ------IAEGMAF 125
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ + + IHRDL+A+N+L+ ++ KI+DFG+AR+ +E + + +PE
Sbjct: 126 IEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPE 181
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
+G F+IKSDV+SFG+LL E ++ + +T NL +R ++++ P
Sbjct: 182 AINYGTFTIKSDVWSFGILLTEIVTHGR----IPYPGMTNPEVIQNL---ERGYRMVRPD 234
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
E LY +++ LC +E DRPT + S++++
Sbjct: 235 NCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLED 267
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G +VAVK L S + F E L+ +L H+ LVRL+ +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
Q +I EYM N SL FL K SG + + +LD + IA+G+ +
Sbjct: 78 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTIN----KLLDMAAQ------IAEGMAF 124
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ + + IHRDL+A+N+L+ ++ KI+DFG+AR+ +E + + +PE
Sbjct: 125 IEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPE 180
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
+G F+IKSDV+SFG+LL E ++ + +T NL +R ++++ P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGR----IPYPGMTNPEVIQNL---ERGYRMVRPD 233
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
E LY +++ LC +E DRPT + S++++
Sbjct: 234 NCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLED 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G +VAVK L S + F E L+ +L H+ LVRL+ +
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 79
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
Q +I EYM N SL FL K SG + + +LD + IA+G+ +
Sbjct: 80 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTIN----KLLDMAAQ------IAEGMAF 126
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ + + IHRDL+A+N+L+ ++ KI+DFG+AR+ +E + + +PE
Sbjct: 127 IEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPE 182
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
+G F+IKSDV+SFG+LL E ++ + +T NL +R ++++ P
Sbjct: 183 AINYGTFTIKSDVWSFGILLTEIVTHGR----IPYPGMTNPEVIQNL---ERGYRMVRPD 235
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
E LY +++ LC +E DRPT + S++++
Sbjct: 236 NCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLED 268
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G +VAVK L S + F E L+ +L H+ LVRL+ +
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 72
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
Q +I EYM N SL FL K SG + + +LD + IA+G+ +
Sbjct: 73 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTIN----KLLDMAAQ------IAEGMAF 119
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ + + IHRDL+A+N+L+ ++ KI+DFG+AR+ +E + + +PE
Sbjct: 120 IEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPE 175
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
+G F+IKSDV+SFG+LL E ++ + +T NL +R ++++ P
Sbjct: 176 AINYGTFTIKSDVWSFGILLTEIVTHGR----IPYPGMTNPEVIQNL---ERGYRMVRPD 228
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
E LY +++ LC +E DRPT + S++++
Sbjct: 229 NCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLED 261
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G +VAVK L S + F E L+ +L H+ LVRL+ +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
Q +I EYM N SL FL K SG + + +LD + IA+G+ +
Sbjct: 78 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTIN----KLLDMAAQ------IAEGMAF 124
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ + + IHRDL+A+N+L+ ++ KI+DFG+AR+ +E + + +PE
Sbjct: 125 IEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPE 180
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
+G F+IKSDV+SFG+LL E ++ + +T NL +R ++++ P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGR----IPYPGMTNPEVIQNL---ERGYRMVRPD 233
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
E LY +++ LC +E DRPT + S++++
Sbjct: 234 NCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLED 266
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 126/241 (52%), Gaps = 38/241 (15%)
Query: 165 NFSE---ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKS----GQGVEEFKNEMILIAKL 217
+F+E E +G GGFG VY+ + G+EVAVK + Q +E + E L A L
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 218 HHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTR 277
H N++ L G C+++ L+ E+ L+ L SG + D +++W +
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL------SGKRIPPD----ILVNWAVQ 113
Query: 278 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL-----DGDMNP---KISDFGIARMFG 329
IA+G+ YLH + + +IHRDLK+SN+L+ +GD++ KI+DFG+AR +
Sbjct: 114 ------IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH 167
Query: 330 GDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLT 389
++ G Y +M+PE +FS SDV+S+GVLL E L+ + F ID L
Sbjct: 168 ----RTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE--VPFRGIDGLA 221
Query: 390 L 390
+
Sbjct: 222 V 222
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 44/325 (13%)
Query: 138 GDSAAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLS 197
G +G +K++W I + E KLG+G FG V+ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 51
Query: 198 NKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSL-DFFLFDYKY 256
+ E F E ++ KL H LV+L+ E+ I+I EYM SL DF +
Sbjct: 52 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGK 109
Query: 257 SSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN 316
+ D A++ IA G+ Y+ R+ +HRDL+A+N+L+ ++
Sbjct: 110 YLRLPQLVDMAAQ--------------IASGMAYVE---RMNYVHRDLRAANILVGENLV 152
Query: 317 PKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSS 376
K++DFG+AR+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++
Sbjct: 153 CKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTT 210
Query: 377 KKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAA 436
K + + + +L +R +++ P E+L+ ++ + C +++
Sbjct: 211 KGRVPYPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPE 257
Query: 437 DRPTMSEVVSMIKNEIVNLPSPQQP 461
+RPT + + +++ + QP
Sbjct: 258 ERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 138/284 (48%), Gaps = 40/284 (14%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G N +VAVK L + V+ F E L+ L H LVRL+
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
+ +I EYM SL FL K G ++ ++D++ + IA+G+ Y
Sbjct: 79 REEPIYIITEYMAKGSLLDFL---KSDEGGKVLL----PKLIDFSAQ------IAEGMAY 125
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ R IHRDL+A+NVL+ + KI+DFG+AR+ +E + + +PE
Sbjct: 126 IE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPE 181
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKK--NTRFYNIDSLTLLGHAWNLWKDDRAWKLLD 408
G F+IKSDV+SFG+LL E ++ K N D +T L + +
Sbjct: 182 AINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRM----------- 230
Query: 409 PTLQN--EALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
P ++N + LY ++K +C +E A +RPT + S++ +
Sbjct: 231 PRVENCPDELYDIMK-------MCWKEKAEERPTFDYLQSVLDD 267
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 44/325 (13%)
Query: 138 GDSAAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLS 197
G +G +K++W I + E KLG+G FG V+ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 51
Query: 198 NKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSL-DFFLFDYKY 256
+ E F E ++ KL H LV+L+ E+ I+I EYM SL DF +
Sbjct: 52 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGK 109
Query: 257 SSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN 316
+ D A++ IA G+ Y+ R+ +HRDL+A+N+L+ ++
Sbjct: 110 YLRLPQLVDMAAQ--------------IASGMAYVE---RMNYVHRDLRAANILVGENLV 152
Query: 317 PKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSS 376
K++DFG+AR+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTT 210
Query: 377 KKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAA 436
K + + + +L +R +++ P E+L+ ++ + C +++
Sbjct: 211 KGRVPYPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPE 257
Query: 437 DRPTMSEVVSMIKNEIVNLPSPQQP 461
+RPT + + +++ + QP
Sbjct: 258 ERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G +VAVK L S + F E L+ +L H+ LVRL+ +
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 73
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
Q +I EYM N SL FL K SG + + +LD + IA+G+ +
Sbjct: 74 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTIN----KLLDMAAQ------IAEGMAF 120
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ + + IHR+L+A+N+L+ ++ KI+DFG+AR+ +E + + +PE
Sbjct: 121 IEERN---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPE 176
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
+G F+IKSDV+SFG+LL E ++ + +T NL +R ++++ P
Sbjct: 177 AINYGTFTIKSDVWSFGILLTEIVTHGR----IPYPGMTNPEVIQNL---ERGYRMVRPD 229
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
E LY +++ LC +E DRPT + S++++
Sbjct: 230 NCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLED 262
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 118/210 (56%), Gaps = 24/210 (11%)
Query: 172 LGEGGFGPVYKGKLL-NGE----EVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVRL 225
LG G FG VYKG + GE VA+K L+ +G EF +E +++A + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ + L+ + MP+ L ++ ++K + G S+ +L+W + IA
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIG--------SQLLLNWCVQ------IA 150
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
+G++YL + R++HRDL A NVL+ + KI+DFG+AR+ GDE + N +
Sbjct: 151 KGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 207
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E + F+ +SDV+S+GV + E ++
Sbjct: 208 WMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 118/210 (56%), Gaps = 24/210 (11%)
Query: 172 LGEGGFGPVYKGKLL-NGE----EVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVRL 225
LG G FG VYKG + GE VA+K L+ +G EF +E +++A + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ + L+ + MP+ L ++ ++K + G S+ +L+W + IA
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIG--------SQLLLNWCVQ------IA 127
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
+G++YL + R++HRDL A NVL+ + KI+DFG+AR+ GDE + N +
Sbjct: 128 KGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 184
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E + F+ +SDV+S+GV + E ++
Sbjct: 185 WMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 153/325 (47%), Gaps = 44/325 (13%)
Query: 138 GDSAAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLS 197
G +G +K++W I + E KLG+G FG V+ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 51
Query: 198 NKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSL-DFFLFDYKY 256
+ E F E ++ KL H LV+L+ E+ I + EYM SL DF +
Sbjct: 52 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VCEYMSKGSLLDFLKGEMGK 109
Query: 257 SSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN 316
+ D A++ IA G+ Y+ R+ +HRDL+A+N+L+ ++
Sbjct: 110 YLRLPQLVDMAAQ--------------IASGMAYVE---RMNYVHRDLRAANILVGENLV 152
Query: 317 PKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSS 376
K++DFG+AR+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTT 210
Query: 377 KKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAA 436
K + + + +L +R +++ P E+L+ ++ + C +++
Sbjct: 211 KGRVPYPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPE 257
Query: 437 DRPTMSEVVSMIKNEIVNLPSPQQP 461
+RPT + + +++ + QP
Sbjct: 258 ERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 153/325 (47%), Gaps = 44/325 (13%)
Query: 138 GDSAAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLS 197
G +G +K++W I + E KLG+G FG V+ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 51
Query: 198 NKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSL-DFFLFDYKY 256
+ E F E ++ KL H LV+L+ E+ I + EYM SL DF +
Sbjct: 52 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGK 109
Query: 257 SSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN 316
+ D A++ IA G+ Y+ R+ +HRDL+A+N+L+ ++
Sbjct: 110 YLRLPQLVDMAAQ--------------IASGMAYVE---RMNYVHRDLRAANILVGENLV 152
Query: 317 PKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSS 376
K++DFG+AR+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTT 210
Query: 377 KKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAA 436
K + + + +L +R +++ P E+L+ ++ + C +++
Sbjct: 211 KGRVPYPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPE 257
Query: 437 DRPTMSEVVSMIKNEIVNLPSPQQP 461
+RPT + + +++ + QP
Sbjct: 258 ERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 39/282 (13%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG V+ G LN ++VA+K + + E+F E ++ KL H LV+L+G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+EQ L++E+M + L +L +G+ T + + + +G+
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL--------------RTQRGLFAAETLLGMCLDVCEGMA 117
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT---YGY 346
YL + S VIHRDL A N L+ + K+SDFG+ R D+ S+ GT +
Sbjct: 118 YLEEAS---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----TGTKFPVKW 170
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKL 406
SPE +S KSDV+SFGVL+ E S K + N + ++ ++L
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDI------STGFRL 223
Query: 407 LDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
P L + +Y ++ C +E DRP S ++ +
Sbjct: 224 YKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQL 258
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 153/325 (47%), Gaps = 44/325 (13%)
Query: 138 GDSAAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLS 197
G +G +K++W I + E KLG+G FG V+ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 51
Query: 198 NKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSL-DFFLFDYKY 256
+ E F E ++ K+ H LV+L+ E+ I + EYM SL DF +
Sbjct: 52 PGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGK 109
Query: 257 SSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN 316
+ D A++ IA G+ Y+ R+ +HRDL+A+N+L+ ++
Sbjct: 110 YLRLPQLVDMAAQ--------------IASGMAYVE---RMNYVHRDLRAANILVGENLV 152
Query: 317 PKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSS 376
K++DFG+AR+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTT 210
Query: 377 KKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAA 436
K + + + +L +R +++ P E+L+ ++ + C +++
Sbjct: 211 KGRVPYPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPE 257
Query: 437 DRPTMSEVVSMIKNEIVNLPSPQQP 461
+RPT + + +++ + QP
Sbjct: 258 ERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 153/325 (47%), Gaps = 44/325 (13%)
Query: 138 GDSAAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLS 197
G +G +K++W I + E KLG+G FG V+ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 51
Query: 198 NKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSL-DFFLFDYKY 256
+ E F E ++ KL H LV+L+ E+ I++ EYM L DF +
Sbjct: 52 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVM-EYMSKGCLLDFLKGEMGK 109
Query: 257 SSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN 316
+ D A++ IA G+ Y+ R+ +HRDL+A+N+L+ ++
Sbjct: 110 YLRLPQLVDMAAQ--------------IASGMAYVE---RMNYVHRDLRAANILVGENLV 152
Query: 317 PKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSS 376
K++DFG+AR+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTT 210
Query: 377 KKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAA 436
K + + + +L +R +++ P E+L+ ++ + C +++
Sbjct: 211 KGRVPYPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPE 257
Query: 437 DRPTMSEVVSMIKNEIVNLPSPQQP 461
+RPT + + +++ + QP
Sbjct: 258 ERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 152/325 (46%), Gaps = 44/325 (13%)
Query: 138 GDSAAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLS 197
G +G +K++W I + E KLG+G FG V+ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 51
Query: 198 NKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSL-DFFLFDYKY 256
+ E F E ++ KL H LV+L+ E+ I + EYM SL DF +
Sbjct: 52 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGK 109
Query: 257 SSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN 316
+ D A++ IA G+ Y+ R+ +HRDL A+N+L+ ++
Sbjct: 110 YLRLPQLVDMAAQ--------------IASGMAYVE---RMNYVHRDLAAANILVGENLV 152
Query: 317 PKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSS 376
K++DFG+AR+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTT 210
Query: 377 KKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAA 436
K + + + +L +R +++ P E+L+ ++ + C +++
Sbjct: 211 KGRVPYPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPE 257
Query: 437 DRPTMSEVVSMIKNEIVNLPSPQQP 461
+RPT + + +++ + QP
Sbjct: 258 ERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 140/280 (50%), Gaps = 33/280 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G G V+ G +VAVK L S + F E L+ +L H+ LVRL+ +
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
Q +I EYM N SL FL K SG + + +LD + IA+G+ +
Sbjct: 78 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTIN----KLLDMAAQ------IAEGMAF 124
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ + + IHRDL+A+N+L+ ++ KI+DFG+AR+ E + + +PE
Sbjct: 125 IEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI-KWTAPE 180
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
+G F+IKSDV+SFG+LL E ++ + +T NL +R ++++ P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGR----IPYPGMTNPEVIQNL---ERGYRMVRPD 233
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
E LY +++ LC +E DRPT + S++++
Sbjct: 234 NCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLED 266
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 152/325 (46%), Gaps = 44/325 (13%)
Query: 138 GDSAAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLS 197
G +G +K++W I + E KLG+G FG V+ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 51
Query: 198 NKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSL-DFFLFDYKY 256
+ E F E ++ KL H LV+L+ E+ I + EYM L DF +
Sbjct: 52 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGCLLDFLKGEMGK 109
Query: 257 SSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN 316
+ D A++ IA G+ Y+ R+ +HRDL+A+N+L+ ++
Sbjct: 110 YLRLPQLVDMAAQ--------------IASGMAYVE---RMNYVHRDLRAANILVGENLV 152
Query: 317 PKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSS 376
K++DFG+AR+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTT 210
Query: 377 KKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAA 436
K + + + +L +R +++ P E+L+ ++ + C +++
Sbjct: 211 KGRVPYPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPE 257
Query: 437 DRPTMSEVVSMIKNEIVNLPSPQQP 461
+RPT + + +++ + QP
Sbjct: 258 ERPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 42/320 (13%)
Query: 142 AKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSG 201
+G +K++W I + E KLG+G FG V+ G VA+K L +
Sbjct: 171 TQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT- 220
Query: 202 QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFD 261
E F E ++ KL H LV+L+ E+ I + EYM SL FL K +G
Sbjct: 221 MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFL---KGETG-- 274
Query: 262 MVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISD 321
L V + IA G+ Y+ R+ +HRDL+A+N+L+ ++ K++D
Sbjct: 275 --------KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 323
Query: 322 FGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTR 381
FG+AR+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++K
Sbjct: 324 FGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVP 381
Query: 382 FYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTM 441
+ + + +L +R +++ P E+L+ ++ + C ++ +RPT
Sbjct: 382 YPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKEPEERPTF 428
Query: 442 SEVVSMIKNEIVNLPSPQQP 461
+ + +++ + QP
Sbjct: 429 EYLQAFLEDYFTSTEPQXQP 448
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 33/279 (11%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG V+ G LN ++VA+K + + E+F E ++ KL H LV+L+G C
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+EQ L++E+M + L +L +G+ T + + + +G+
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYL--------------RTQRGLFAAETLLGMCLDVCEGMA 120
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YL + VIHRDL A N L+ + K+SDFG+ R D+ S+ + SP
Sbjct: 121 YLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASP 176
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDP 409
E +S KSDV+SFGVL+ E S K + N + ++ ++L P
Sbjct: 177 EVFSFSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDI------STGFRLYKP 229
Query: 410 TLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
L + +Y ++ C +E DRP S ++ +
Sbjct: 230 RLASTHVYQIMNH-------CWRERPEDRPAFSRLLRQL 261
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 9/218 (4%)
Query: 171 KLGEGGFGPVYKGK---LLNGEE---VAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LGEG FG V+ + LL ++ VAVK L S ++F+ E L+ L H+++VR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
FG C E ++++EYM + L+ FL + + + + G L + + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
A G++YL + L +HRDL N L+ + KI DFG++R + R +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 345 GYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRF 382
+M PE L+ F+ +SDV+SFGV+L E + K +
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 239
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 9/218 (4%)
Query: 171 KLGEGGFGPVYKGK---LLNGEE---VAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LGEG FG V+ + LL ++ VAVK L S ++F+ E L+ L H+++VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
FG C E ++++EYM + L+ FL + + + + G L + + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
A G++YL + L +HRDL N L+ + KI DFG++R + R +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 345 GYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRF 382
+M PE L+ F+ +SDV+SFGV+L E + K +
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 233
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 138/284 (48%), Gaps = 40/284 (14%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
KLG G FG V+ G N +VAVK L + V+ F E L+ L H LVRL+
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
++ +I E+M SL D+ S V P ++D++ + IA+G+ Y
Sbjct: 78 KEEPIYIITEFMAKGSL----LDFLKSDEGGKVLLPK---LIDFSAQ------IAEGMAY 124
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ R IHRDL+A+NVL+ + KI+DFG+AR+ +E + + +PE
Sbjct: 125 IE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPE 180
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKK--NTRFYNIDSLTLLGHAWNLWKDDRAWKLLD 408
G F+IKS+V+SFG+LL E ++ K N D ++ L + +
Sbjct: 181 AINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRM----------- 229
Query: 409 PTLQN--EALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
P ++N + LY ++K +C +E A +RPT + S++ +
Sbjct: 230 PRMENCPDELYDIMK-------MCWKEKAEERPTFDYLQSVLDD 266
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 33/279 (11%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG V+ G LN ++VA+K + + E+F E ++ KL H LV+L+G C
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+EQ L++E+M + L +L +G+ T + + + +G+
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYL--------------RTQRGLFAAETLLGMCLDVCEGMA 115
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YL + VIHRDL A N L+ + K+SDFG+ R D+ S+ + SP
Sbjct: 116 YLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASP 171
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDP 409
E +S KSDV+SFGVL+ E S K + N + ++ ++L P
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDI------STGFRLYKP 224
Query: 410 TLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
L + +Y ++ C +E DRP S ++ +
Sbjct: 225 RLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQL 256
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 35/294 (11%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGC 228
E KLG+G FG V+ G VA+K L + E F E ++ KL H LV+L+
Sbjct: 12 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 229 CIEQGEKILIYEYMPNKSL-DFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
E+ I + EYM SL DF + + D A++ IA G
Sbjct: 71 VSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ--------------IASG 115
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
+ Y+ R+ +HRDL+A+N+L+ ++ K++DFG+AR+ +E + +
Sbjct: 116 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWT 171
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLL 407
+PE AL+G F+IKSDV+SFG+LL E L++K + + + +L +R +++
Sbjct: 172 APEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ERGYRMP 224
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQP 461
P E+L+ ++ + C +++ +RPT + + +++ + QP
Sbjct: 225 CPPECPESLHDLMCQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQYQP 271
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 42/320 (13%)
Query: 142 AKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSG 201
+G +K++W I + E KLG+G FG V+ G VA+K L +
Sbjct: 171 TQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT- 220
Query: 202 QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFD 261
E F E ++ KL H LV+L+ E+ I + EYM SL FL K +G
Sbjct: 221 MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFL---KGETG-- 274
Query: 262 MVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISD 321
L V + IA G+ Y+ R+ +HRDL+A+N+L+ ++ K++D
Sbjct: 275 --------KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 323
Query: 322 FGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTR 381
FG+AR+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++K
Sbjct: 324 FGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVP 381
Query: 382 FYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTM 441
+ + + +L +R +++ P E+L+ ++ + C ++ +RPT
Sbjct: 382 YPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKEPEERPTF 428
Query: 442 SEVVSMIKNEIVNLPSPQQP 461
+ + +++ + QP
Sbjct: 429 EYLQAFLEDYFTSTEPQYQP 448
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 33/279 (11%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG V+ G LN ++VA+K + + E+F E ++ KL H LV+L+G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+EQ L++E+M + L +L +G+ T + + + +G+
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL--------------RTQRGLFAAETLLGMCLDVCEGMA 117
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YL + VIHRDL A N L+ + K+SDFG+ R D+ S+ + SP
Sbjct: 118 YLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASP 173
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDP 409
E +S KSDV+SFGVL+ E S K + N + ++ ++L P
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDI------STGFRLYKP 226
Query: 410 TLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
L + +Y ++ C +E DRP S ++ +
Sbjct: 227 RLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQL 258
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 142/294 (48%), Gaps = 35/294 (11%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGC 228
E KLG+G FG V+ G VA+K L + E F E ++ KL H LV+L+
Sbjct: 13 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 229 CIEQGEKILIYEYMPNKSL-DFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
E+ I + EYM SL DF + + D A++ IA G
Sbjct: 72 VSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ--------------IASG 116
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
+ Y+ R+ +HRDL+A+N+L+ ++ K++DFG+AR+ +E + +
Sbjct: 117 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWT 172
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLL 407
+PE AL+G F+IKSDV+SFG+LL E L++K + + + +L +R +++
Sbjct: 173 APEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ERGYRMP 225
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQP 461
P E+L+ ++ + C ++ +RPT + + +++ + QP
Sbjct: 226 CPPECPESLHDLMCQ-------CWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 272
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 117/229 (51%), Gaps = 19/229 (8%)
Query: 164 HNFSEENKLGEGGFGPVYKGKLLN--GEE----VAVKRLSNKSGQGVEEFKNEMILIAKL 217
HN + +LGEG FG V+ + N E+ VAVK L + S ++F E L+ L
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 218 HHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTR 277
H ++V+ +G C+E I+++EYM + L+ FL + + +P ++ L +
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE--LTQSQM 130
Query: 278 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM 337
+ I + IA G++YL + +HRDL N L+ ++ KI DFG++R D ++
Sbjct: 131 LHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR----DVYSTDY 183
Query: 338 NRIVG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRF 382
R+ G +M PE ++ F+ +SDV+S GV+L E + K +
Sbjct: 184 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY 232
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 35/294 (11%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGC 228
E KLG+G FG V+ G VA+K L + E F E ++ KL H LV+L+
Sbjct: 14 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 229 CIEQGEKILIYEYMPNKSL-DFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
E+ I + EYM SL DF + + D A++ IA G
Sbjct: 73 VSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ--------------IASG 117
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
+ Y+ R+ +HRDL+A+N+L+ ++ K++DFG+AR+ +E + +
Sbjct: 118 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWT 173
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLL 407
+PE AL+G F+IKSDV+SFG+LL E L++K + + + +L +R +++
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ERGYRMP 226
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQP 461
P E+L+ ++ + C +++ +RPT + + +++ + QP
Sbjct: 227 CPPECPESLHDLMCQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQYQP 273
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 9/218 (4%)
Query: 171 KLGEGGFGPVYKGK---LLNGEE---VAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LGEG FG V+ + LL ++ VAVK L S ++F+ E L+ L H+++VR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
FG C E ++++EYM + L+ FL + + + + G L + + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
A G++YL + L +HRDL N L+ + KI DFG++R + R +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 345 GYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRF 382
+M PE L+ F+ +SDV+SFGV+L E + K +
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 151/321 (47%), Gaps = 42/321 (13%)
Query: 142 AKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSG 201
+G +K++W I + E KLG+G FG V+ G VA+K L +
Sbjct: 171 TQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT- 220
Query: 202 QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFD 261
E F E ++ KL H LV+L+ E+ I + EYM SL FL K +G
Sbjct: 221 MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VGEYMSKGSLLDFL---KGETG-- 274
Query: 262 MVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISD 321
L V + IA G+ Y+ R+ +HRDL+A+N+L+ ++ K++D
Sbjct: 275 --------KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 323
Query: 322 FGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTR 381
FG+AR+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++K
Sbjct: 324 FGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVP 381
Query: 382 FYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTM 441
+ + + +L +R +++ P E+L+ ++ + C ++ +RPT
Sbjct: 382 YPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKEPEERPTF 428
Query: 442 SEVVSMIKNEIVNLPSPQQPA 462
+ + +++ + QP
Sbjct: 429 EYLQAFLEDYFTSTEPQXQPG 449
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 151/321 (47%), Gaps = 42/321 (13%)
Query: 142 AKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSG 201
+G +K++W I + E KLG+G FG V+ G VA+K L +
Sbjct: 254 TQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT- 303
Query: 202 QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFD 261
E F E ++ KL H LV+L+ E+ ++ EYM SL FL K +G
Sbjct: 304 MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL---KGETG-- 357
Query: 262 MVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISD 321
L V + IA G+ Y+ R+ +HRDL+A+N+L+ ++ K++D
Sbjct: 358 --------KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 406
Query: 322 FGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTR 381
FG+AR+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++K
Sbjct: 407 FGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVP 464
Query: 382 FYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTM 441
+ + + +L +R +++ P E+L+ ++ + C ++ +RPT
Sbjct: 465 YPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKEPEERPTF 511
Query: 442 SEVVSMIKNEIVNLPSPQQPA 462
+ + +++ + QP
Sbjct: 512 EYLQAFLEDYFTSTEPQXQPG 532
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 150/322 (46%), Gaps = 44/322 (13%)
Query: 142 AKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSG 201
+G +K++W I + E KLG+G FG V+ G VA+K L
Sbjct: 172 TQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGN 221
Query: 202 QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSL-DFFLFDYKYSSGF 260
E F E ++ KL H LV+L+ E+ I + EYM SL DF +
Sbjct: 222 MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRL 280
Query: 261 DMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKIS 320
+ D A++ IA G+ Y+ R+ +HRDL+A+N+L+ ++ K++
Sbjct: 281 PQLVDMAAQ--------------IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVA 323
Query: 321 DFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNT 380
DFG+ R+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++K
Sbjct: 324 DFGLGRLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRV 381
Query: 381 RFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPT 440
+ + + +L +R +++ P E+L+ ++ + C +++ +RPT
Sbjct: 382 PYPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPEERPT 428
Query: 441 MSEVVSMIKNEIVNLPSPQQPA 462
+ + +++ + QP
Sbjct: 429 FEYLQAFLEDYFTSTEPQXQPG 450
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 33/293 (11%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGC 228
E KLG+G FG V+ G VA+K L + E F E ++ KL H LV+L+
Sbjct: 16 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
E+ I + EYM SL FL K +G L V + IA G+
Sbjct: 75 VSEEPIYI-VTEYMSKGSLLDFL---KGETG----------KYLRLPQLVDMAAQIASGM 120
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMS 348
Y+ R+ +HRDL+A+N+L+ ++ K++DFG+AR+ +E + + +
Sbjct: 121 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTA 176
Query: 349 PEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLD 408
PE AL+G F+IKSDV+SFG+LL E L++K + + + +L +R +++
Sbjct: 177 PEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ERGYRMPC 229
Query: 409 PTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQP 461
P E+L+ ++ + C ++ +RPT + + +++ + QP
Sbjct: 230 PPECPESLHDLMCQ-------CWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 275
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 42/320 (13%)
Query: 142 AKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSG 201
+G +K++W I + E KLG+G FG V+ G VA+K L +
Sbjct: 2 TQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT- 51
Query: 202 QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFD 261
E F E ++ KL H LV+L+ E+ I + EYM SL FL K +G
Sbjct: 52 MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFL---KGETG-- 105
Query: 262 MVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISD 321
L V + IA G+ Y+ R+ +HRDL+A+N+L+ ++ K++D
Sbjct: 106 --------KYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 154
Query: 322 FGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTR 381
FG+AR+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++K
Sbjct: 155 FGLARLIEDNEWTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVP 212
Query: 382 FYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTM 441
+ + + +L +R +++ P E+L+ ++ + C ++ +RPT
Sbjct: 213 YPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKEPEERPTF 259
Query: 442 SEVVSMIKNEIVNLPSPQQP 461
+ + +++ + QP
Sbjct: 260 EYLQAFLEDYFTSTEPQYQP 279
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 146/298 (48%), Gaps = 41/298 (13%)
Query: 165 NFSEENKLGEGGFGPVYKG--KLLNGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHH 219
N S + +G G FG V G KL + +E++V + K G + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 220 RNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
N++RL G + +++ EYM N SLD FL K+ + F ++ V
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ------------LVG 151
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ GIA G+ YL S + +HRDL A N+L++ ++ K+SDFG+AR+ D + R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
Query: 340 IVG---TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWN 396
G + SPE + F+ SDV+S+G++L E +S + ++ + + ++
Sbjct: 209 --GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-YWEMSNQDVIKAV-- 263
Query: 397 LWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
D ++L P ALY ++ L C Q++ +RP ++VS++ I N
Sbjct: 264 ----DEGYRLPPPMDCPAALY-------QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 42/320 (13%)
Query: 142 AKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSG 201
+G +K++W I + E KLG+G FG V+ G VA+K L +
Sbjct: 2 TQGLAKDAWEI---------PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT- 51
Query: 202 QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFD 261
E F E ++ KL H LV+L+ E+ I + EYM SL FL K +G
Sbjct: 52 MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFL---KGETG-- 105
Query: 262 MVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISD 321
L V + IA G+ Y+ R+ +HRDL+A+N+L+ ++ K++D
Sbjct: 106 --------KYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 154
Query: 322 FGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTR 381
FG+AR+ +E + + +PE AL+G F+IKSDV+SFG+LL E L++K
Sbjct: 155 FGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVP 212
Query: 382 FYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTM 441
+ + + +L +R +++ P E+L+ ++ + C ++ +RPT
Sbjct: 213 YPGMVNREVLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKEPEERPTF 259
Query: 442 SEVVSMIKNEIVNLPSPQQP 461
+ + +++ + QP
Sbjct: 260 EYLQAFLEDYFTSTEPQYQP 279
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 33/279 (11%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG V+ G LN ++VA+K + + E+F E ++ KL H LV+L+G C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+EQ L+ E+M + L +L +G+ T + + + +G+
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYL--------------RTQRGLFAAETLLGMCLDVCEGMA 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YL + VIHRDL A N L+ + K+SDFG+ R D+ S+ + SP
Sbjct: 119 YLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASP 174
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDP 409
E +S KSDV+SFGVL+ E S K + N + ++ ++L P
Sbjct: 175 EVFSFSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDI------STGFRLYKP 227
Query: 410 TLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
L + +Y ++ C +E DRP S ++ +
Sbjct: 228 RLASTHVYQIMNH-------CWRERPEDRPAFSRLLRQL 259
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 41/298 (13%)
Query: 165 NFSEENKLGEGGFGPVYKG--KLLNGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHH 219
N S + +G G FG V G KL + +E++V + K G + +F E ++ + H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 220 RNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
N++RL G + +++ EYM N SLD FL K+ + F ++ V
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ------------LVG 122
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ GIA G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ D + R
Sbjct: 123 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 340 IVG---TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWN 396
G + SPE + F+ SDV+S+G++L E +S + ++ + + ++
Sbjct: 180 --GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-YWEMSNQDVIKAV-- 234
Query: 397 LWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
D ++L P ALY ++ L C Q++ +RP ++VS++ I N
Sbjct: 235 ----DEGYRLPPPMDCPAALYQLM-------LDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 33/279 (11%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG V+ G LN ++VA+K + S ++F E ++ KL H LV+L+G C
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+EQ L++E+M + L +L +G+ T + + + +G+
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYL--------------RTQRGLFAAETLLGMCLDVCEGMA 137
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YL + VIHRDL A N L+ + K+SDFG+ R D+ S+ + SP
Sbjct: 138 YLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASP 193
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDP 409
E +S KSDV+SFGVL+ E S K + N + ++ ++L P
Sbjct: 194 EVFSFSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDI------STGFRLYKP 246
Query: 410 TLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
L + +Y ++ C +E DRP S ++ +
Sbjct: 247 RLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQL 278
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 41/298 (13%)
Query: 165 NFSEENKLGEGGFGPVYKG--KLLNGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHH 219
N S + +G G FG V G KL + +E++V + K G + +F E ++ + H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 220 RNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
N++RL G + +++ EYM N SLD FL K+ + F ++ V
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ------------LVG 139
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ GIA G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ D + R
Sbjct: 140 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
Query: 340 IVG---TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWN 396
G + SPE + F+ SDV+S+G++L E +S + ++ + + ++
Sbjct: 197 --GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-YWEMSNQDVIKAV-- 251
Query: 397 LWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
D ++L P ALY ++ L C Q++ +RP ++VS++ I N
Sbjct: 252 ----DEGYRLPPPMDCPAALY-------QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 298
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 41/298 (13%)
Query: 165 NFSEENKLGEGGFGPVYKG--KLLNGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHH 219
N S + +G G FG V G KL + +E++V + K G + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 220 RNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
N++RL G + +++ EYM N SLD FL K+ + F ++ V
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ------------LVG 151
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ GIA G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ D + R
Sbjct: 152 MLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 340 IVG---TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWN 396
G + SPE + F+ SDV+S+G++L E +S + ++ + + ++
Sbjct: 209 --GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-YWEMSNQDVIKAV-- 263
Query: 397 LWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
D ++L P ALY ++ L C Q++ +RP ++VS++ I N
Sbjct: 264 ----DEGYRLPPPMDCPAALY-------QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 41/298 (13%)
Query: 165 NFSEENKLGEGGFGPVYKG--KLLNGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHH 219
N S + +G G FG V G KL + +E++V + K G + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 220 RNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
N++RL G + +++ EYM N SLD FL K+ + F ++ V
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ------------LVG 151
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ GIA G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ D + R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 340 IVG---TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWN 396
G + SPE + F+ SDV+S+G++L E +S + ++ + + ++
Sbjct: 209 --GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-YWEMSNQDVIKAV-- 263
Query: 397 LWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
D ++L P ALY ++ L C Q++ +RP ++VS++ I N
Sbjct: 264 ----DEGYRLPPPMDCPAALY-------QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 41/298 (13%)
Query: 165 NFSEENKLGEGGFGPVYKG--KLLNGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHH 219
N S + +G G FG V G KL + +E++V + K G + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 220 RNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
N++RL G + +++ EYM N SLD FL K+ + F ++ V
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ------------LVG 151
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ GIA G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ D + R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 340 IVG---TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWN 396
G + SPE + F+ SDV+S+G++L E +S + ++ + + ++
Sbjct: 209 --GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-YWEMSNQDVIKAV-- 263
Query: 397 LWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
D ++L P ALY ++ L C Q++ +RP ++VS++ I N
Sbjct: 264 ----DEGYRLPPPMDCPAALY-------QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 41/298 (13%)
Query: 165 NFSEENKLGEGGFGPVYKG--KLLNGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHH 219
N S + +G G FG V G KL + +E++V + K G + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 220 RNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
N++RL G + +++ EYM N SLD FL K+ + F ++ V
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ------------LVG 151
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ GIA G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ D + R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 340 IVG---TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWN 396
G + SPE + F+ SDV+S+G++L E +S + ++ + + ++
Sbjct: 209 --GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-YWEMSNQDVIKAV-- 263
Query: 397 LWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
D ++L P ALY ++ L C Q++ +RP ++VS++ I N
Sbjct: 264 ----DEGYRLPPPMDCPAALY-------QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 41/298 (13%)
Query: 165 NFSEENKLGEGGFGPVYKG--KLLNGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHH 219
N S + +G G FG V G KL + +E++V + K G + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 220 RNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
N++RL G + +++ EYM N SLD FL K+ + F ++ V
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ------------LVG 151
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ GIA G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ D + R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 340 IVG---TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWN 396
G + SPE + F+ SDV+S+G++L E +S + ++ + + ++
Sbjct: 209 --GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-YWEMSNQDVIKAV-- 263
Query: 397 LWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
D ++L P ALY ++ L C Q++ +RP ++VS++ I N
Sbjct: 264 ----DEGYRLPPPMDCPAALY-------QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 41/298 (13%)
Query: 165 NFSEENKLGEGGFGPVYKG--KLLNGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHH 219
N S + +G G FG V G KL + +E++V + K G + +F E ++ + H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 220 RNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
N++RL G + +++ EYM N SLD FL K+ + F ++ V
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ------------LVG 149
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ GIA G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ D + R
Sbjct: 150 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
Query: 340 IVG---TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWN 396
G + SPE + F+ SDV+S+G++L E +S + ++ + + ++
Sbjct: 207 --GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-YWEMSNQDVIKAV-- 261
Query: 397 LWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
D ++L P ALY ++ L C Q++ +RP ++VS++ I N
Sbjct: 262 ----DEGYRLPPPMDCPAALY-------QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 308
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 145/298 (48%), Gaps = 41/298 (13%)
Query: 165 NFSEENKLGEGGFGPVYKG--KLLNGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHH 219
N S + +G G FG V G KL + +E++V + K G + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 220 RNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
N++RL G + +++ EYM N SLD FL K+ + F ++ V
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ------------LVG 151
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ GIA G+ YL S + +HRDL A N+L++ ++ K+SDFG+ R+ D + R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
Query: 340 IVG---TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWN 396
G + SPE + F+ SDV+S+G++L E +S + ++ + + ++
Sbjct: 209 --GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-YWEMSNQDVIKAV-- 263
Query: 397 LWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
D ++L P ALY ++ L C Q++ +RP ++VS++ I N
Sbjct: 264 ----DEGYRLPPPMDCPAALY-------QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 18/225 (8%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEE------VAVKRLSNKSGQGVEEFKNEMILIAKLHHRNL 222
+ +LGEG FG V+ + N VAVK L + + ++F+ E L+ L H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDP-ASKGILDWTTRVRII 281
V+ +G C + I+++EYM + L+ FL + + + P +KG L + + I
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
IA G++YL + +HRDL N L+ ++ KI DFG++R D ++ R+
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTDYYRVG 192
Query: 342 G----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRF 382
G +M PE ++ F+ +SDV+SFGV+L E + K F
Sbjct: 193 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 237
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 145/298 (48%), Gaps = 41/298 (13%)
Query: 165 NFSEENKLGEGGFGPVYKG--KLLNGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHH 219
N S + +G G FG V G KL + +E++V + K G + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 220 RNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
N++RL G + +++ E M N SLD FL K+ + F ++ V
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQ------------LVG 151
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ GIA G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ D + R
Sbjct: 152 MLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 340 IVG---TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWN 396
G + SPE + F+ SDV+S+G++L E +S + ++ + + ++
Sbjct: 209 --GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-YWEMSNQDVIKAV-- 263
Query: 397 LWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
D ++L P ALY ++ L C Q++ +RP ++VS++ I N
Sbjct: 264 ----DEGYRLPPPMDCPAALY-------QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 145/298 (48%), Gaps = 41/298 (13%)
Query: 165 NFSEENKLGEGGFGPVYKG--KLLNGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHH 219
N S + +G G FG V G KL + +E++V + K G + +F E ++ + H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 220 RNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
N++RL G + +++ E M N SLD FL K+ + F ++ V
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQ------------LVG 122
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ GIA G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ D + R
Sbjct: 123 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 340 IVG---TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWN 396
G + SPE + F+ SDV+S+G++L E +S + ++ + + ++
Sbjct: 180 --GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-YWEMSNQDVIKAV-- 234
Query: 397 LWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
D ++L P ALY ++ L C Q++ +RP ++VS++ I N
Sbjct: 235 ----DEGYRLPPPMDCPAALY-------QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 145/298 (48%), Gaps = 41/298 (13%)
Query: 165 NFSEENKLGEGGFGPVYKG--KLLNGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHH 219
N S + +G G FG V G KL + +E++V + K G + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 220 RNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
N++RL G + +++ E M N SLD FL K+ + F ++ V
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQ------------LVG 151
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ GIA G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ D + R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 340 IVG---TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWN 396
G + SPE + F+ SDV+S+G++L E +S + ++ + + ++
Sbjct: 209 --GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-YWEMSNQDVIKAV-- 263
Query: 397 LWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
D ++L P ALY ++ L C Q++ +RP ++VS++ I N
Sbjct: 264 ----DEGYRLPPPMDCPAALY-------QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 36/294 (12%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGC 228
E +G G FG V K K ++VA+K++ ++S + + F E+ +++++H N+V+L+G
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 69
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
C+ L+ EY SL Y G + + + + W + +QG+
Sbjct: 70 CL--NPVCLVMEYAEGGSL------YNVLHGAEPLPYYTAAHAMSWCLQC------SQGV 115
Query: 289 LYLHQYSRLRVIHRDLKASNVLL-DGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
YLH +IHRDLK N+LL G KI DFG A ++Q++M G+ +M
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWM 170
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLL 407
+PE +S K DVFS+G++L E ++ +K + ++ W + R
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM---WAVHNGTRP---- 223
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQP 461
P ++N + K + C ++ + RP+M E+V ++ + + P +P
Sbjct: 224 -PLIKN-----LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 36/294 (12%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGC 228
E +G G FG V K K ++VA+K++ ++S + + F E+ +++++H N+V+L+G
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 70
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
C+ L+ EY SL Y G + + + + W + +QG+
Sbjct: 71 CL--NPVCLVMEYAEGGSL------YNVLHGAEPLPYYTAAHAMSWCLQC------SQGV 116
Query: 289 LYLHQYSRLRVIHRDLKASNVLL-DGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
YLH +IHRDLK N+LL G KI DFG A ++Q++M G+ +M
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWM 171
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLL 407
+PE +S K DVFS+G++L E ++ +K + ++ W + R
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM---WAVHNGTRP---- 224
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQP 461
P ++N + K + C ++ + RP+M E+V ++ + + P +P
Sbjct: 225 -PLIKN-----LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 272
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 137/292 (46%), Gaps = 33/292 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V+ G +VA+K L + E F E ++ KL H LV+L+
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
E+ I + EYM SL FL D L V + +A G+ Y
Sbjct: 75 EEPIYI-VTEYMNKGSLLDFLKD-------------GEGRALKLPNLVDMAAQVAAGMAY 120
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
+ R+ IHRDL+++N+L+ + KI+DFG+AR+ +E + + +PE
Sbjct: 121 IE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF-PIKWTAPE 176
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPT 410
AL+G F+IKSDV+SFG+LL E L +K + +++ +L +R +++ P
Sbjct: 177 AALYGRFTIKSDVWSFGILLTE-LVTKGRVPYPGMNNREVLEQV------ERGYRMPCPQ 229
Query: 411 LQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQPA 462
+L+ ++ + C +++ +RPT + S +++ QP
Sbjct: 230 DCPISLH-------ELMIHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQPG 274
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 142
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ YL + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 143 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLP 199
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 200 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 252
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 253 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 290
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 107/206 (51%), Gaps = 18/206 (8%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKS--GQGVEEFKNEMILIAKLHHRNLVRLF 226
+ K+G G FG V++ + +G +VAVK L + + V EF E+ ++ +L H N+V
Sbjct: 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G + ++ EY+ SL L + SG ++ LD R+ + +A+
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLL----HKSG--------AREQLDERRRLSMAYDVAK 148
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
G+ YLH + ++HRDLK+ N+L+D K+ DFG++R+ L S GT +
Sbjct: 149 GMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX--AAGTPEW 205
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLE 372
M+PE + KSDV+SFGV+L E
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWE 231
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 161
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ YL + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 162 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 218
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 219 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 271
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 272 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 309
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 162
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ YL + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 163 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 219
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 220 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 272
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 273 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 310
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 143
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ YL + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 144 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 253
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 254 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 37/281 (13%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
+LG G FG V GK +VA+K + S +EF E ++ L H LV+L+G C
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+Q +I EYM N L +L + ++ ++ +L+ + + + + +
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRF--------QTQQLLE------MCKDVCEAME 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YL + +HRDL A N L++ K+SDFG++R DE S++ + P
Sbjct: 119 YLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPP 174
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKK--NTRFYNIDSLTLLGHAWNLWKDDRAWKLL 407
E ++ FS KSD+++FGVL+ E S K RF N ++ + L++
Sbjct: 175 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-------- 226
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
P L +E +Y ++ C E A +RPT ++S I
Sbjct: 227 -PHLASEKVYTIMYS-------CWHEKADERPTFKILLSNI 259
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 141
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ YL + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 142 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 198
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 199 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 251
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 252 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 135
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ YL + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 136 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 192
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 193 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 245
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 246 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 283
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 138
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ YL + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 139 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 195
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 196 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 248
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 249 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 286
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 140
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ YL + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 141 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 197
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 198 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 250
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 251 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 288
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 143
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ YL + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 144 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 253
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 254 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 37/280 (13%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V GK +VA+K + S +EF E ++ L H LV+L+G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
+Q +I EYM N L +L + ++ + + + + + + + Y
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--------------LEMCKDVCEAMEY 135
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
L + +HRDL A N L++ K+SDFG++R DE S++ + PE
Sbjct: 136 LESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPE 191
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKK--NTRFYNIDSLTLLGHAWNLWKDDRAWKLLD 408
++ FS KSD+++FGVL+ E S K RF N ++ + L++
Sbjct: 192 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR--------- 242
Query: 409 PTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
P L +E +Y ++ C E A +RPT ++S I
Sbjct: 243 PHLASEKVYTIMYS-------CWHEKADERPTFKILLSNI 275
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 37/281 (13%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
+LG G FG V GK +VA+K + S +EF E ++ L H LV+L+G C
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+Q +I EYM N L +L + ++ ++ +L+ + + + + +
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRF--------QTQQLLE------MCKDVCEAME 125
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YL + +HRDL A N L++ K+SDFG++R DE S++ + P
Sbjct: 126 YLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPP 181
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKK--NTRFYNIDSLTLLGHAWNLWKDDRAWKLL 407
E ++ FS KSD+++FGVL+ E S K RF N ++ + L++
Sbjct: 182 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-------- 233
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
P L +E +Y ++ C E A +RPT ++S I
Sbjct: 234 -PHLASEKVYTIMYS-------CWHEKADERPTFKILLSNI 266
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 142
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ YL + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 143 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 199
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 200 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 252
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 253 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 290
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V GK +VA+K + S +EF E ++ L H LV+L+G C
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
+Q +I EYM N L +L + ++ ++ +L+ + + + + + Y
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRF--------QTQQLLE------MCKDVCEAMEY 115
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
L + +HRDL A N L++ K+SDFG++R DE S++ + PE
Sbjct: 116 LESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPE 171
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKK--NTRFYNIDSLTLLGHAWNLWKDDRAWKLLD 408
++ FS KSD+++FGVL+ E S K RF N ++ + L++
Sbjct: 172 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR--------- 222
Query: 409 PTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
P L +E +Y ++ C E A +RPT ++S I
Sbjct: 223 PHLASEKVYTIMYS-------CWHEKADERPTFKILLSNI 255
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 144
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ +L + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 145 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 201
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 202 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 254
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 255 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 292
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V GK +VA+K + S +EF E ++ L H LV+L+G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
+Q +I EYM N L +L + ++ ++ +L+ + + + + + Y
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRF--------QTQQLLE------MCKDVCEAMEY 120
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
L + +HRDL A N L++ K+SDFG++R DE S++ + PE
Sbjct: 121 LESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPE 176
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKK--NTRFYNIDSLTLLGHAWNLWKDDRAWKLLD 408
++ FS KSD+++FGVL+ E S K RF N ++ + L++
Sbjct: 177 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR--------- 227
Query: 409 PTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
P L +E +Y ++ C E A +RPT ++S I
Sbjct: 228 PHLASEKVYTIMYS-------CWHEKADERPTFKILLSNI 260
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 91
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + ++ EYMP + L DY + VT + +
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGN----LLDYLRECNREEVTA---------VVLLYMATQ 138
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 139 ISSAMEYL---EKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI 195
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L ++L ++
Sbjct: 196 -KWTAPESLAYNTFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYDLL--EKG 247
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E P V ++ C + + ADRP+ +E
Sbjct: 248 YRMEQP----EGCPPKVYELMRA---CWKWSPADRPSFAET 281
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 143
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ +L + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 144 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 253
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 254 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 202
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ +L + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 203 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 259
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 260 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 312
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 313 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 350
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 143
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ +L + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 144 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 253
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 254 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 148
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ +L + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 149 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 205
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 206 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 258
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 259 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 296
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 141
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ +L + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 142 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 198
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 199 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 251
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 252 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 289
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M Y + D + + ++ ++ + +
Sbjct: 78 QLLGVCTREPPFYIIIEFM------------TYGNLLDYLRE-CNRQEVNAVVLLYMATQ 124
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 125 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 182 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 233
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 234 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M Y + D + + ++ ++ + +
Sbjct: 78 QLLGVCTREPPFYIITEFM------------TYGNLLDYLRE-CNRQEVNAVVLLYMATQ 124
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 125 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 182 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 233
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 234 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 76
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M Y + D + + ++ ++ + +
Sbjct: 77 QLLGVCTREPPFYIITEFM------------TYGNLLDYLRE-CNRQEVNAVVLLYMATQ 123
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 124 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 180
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 181 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 232
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 233 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 266
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+G G FG VY G LL+ + AVK L+ + G V +F E I++ H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 227 GCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ +G +++ YM + L F+ + + +P K ++ + +V A
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQV------A 144
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG--T 343
+G+ +L + + +HRDL A N +LD K++DFG+AR E S N+
Sbjct: 145 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLP 201
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+M+ E F+ KSDV+SFGVLL E L ++ + ++++ + + +
Sbjct: 202 VKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QG 254
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+LL P + LY +V L C A RP+ SE+VS I
Sbjct: 255 RRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 292
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M Y + D + + ++ ++ + +
Sbjct: 78 QLLGVCTREPPFYIITEFM------------TYGNLLDYLRE-CNRQEVNAVVLLYMATQ 124
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 125 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 181
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 182 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 233
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 234 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 267
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 37/280 (13%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+LG G FG V GK +VA+K + S +EF E ++ L H LV+L+G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
+Q +I EYM N L +L + ++ + + + + + + + Y
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--------------LEMCKDVCEAMEY 135
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
L + +HRDL A N L++ K+SDFG++R DE S++ + PE
Sbjct: 136 LESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPV-RWSPPE 191
Query: 351 YALHGLFSIKSDVFSFGVLLLETLSSKKNT--RFYNIDSLTLLGHAWNLWKDDRAWKLLD 408
++ FS KSD+++FGVL+ E S K RF N ++ + L++
Sbjct: 192 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR--------- 242
Query: 409 PTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
P L +E +Y ++ C E A +RPT ++S I
Sbjct: 243 PHLASEKVYTIMYS-------CWHEKADERPTFKILLSNI 275
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 37/281 (13%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
+LG G FG V GK +VA+K + S +EF E ++ L H LV+L+G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+Q +I EYM N L +L + ++ ++ +L+ + + + + +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRF--------QTQQLLE------MCKDVCEAME 119
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YL + +HRDL A N L++ K+SDFG++R DE S+ + P
Sbjct: 120 YLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV-RWSPP 175
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKK--NTRFYNIDSLTLLGHAWNLWKDDRAWKLL 407
E ++ FS KSD+++FGVL+ E S K RF N ++ + L++
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-------- 227
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
P L +E +Y ++ C E A +RPT ++S I
Sbjct: 228 -PHLASEKVYTIMYS-------CWHEKADERPTFKILLSNI 260
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M +L DY V+ + +
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNL----LDYLRECNRQEVSA---------VVLLYMATQ 119
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 120 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 177 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 228
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 229 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 262
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M Y + D + + ++ ++ + +
Sbjct: 74 QLLGVCTREPPFYIIIEFM------------TYGNLLDYLRE-CNRQEVNAVVLLYMATQ 120
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 121 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 177
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 178 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 229
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 230 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 263
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M Y + D + + ++ ++ + +
Sbjct: 73 QLLGVCTREPPFYIITEFM------------TYGNLLDYLRE-CNRQEVNAVVLLYMATQ 119
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 120 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 177 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 228
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 229 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 262
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 134/285 (47%), Gaps = 43/285 (15%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
+LG G FG V GK +VAVK + S +EF E + KL H LV+ +G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
++ ++ EY+ N L +Y S G KG L+ + + + + +G+
Sbjct: 73 SKEYPIYIVTEYISNGCL----LNYLRSHG---------KG-LEPSQLLEMCYDVCEGMA 118
Query: 290 YL--HQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT---Y 344
+L HQ+ IHRDL A N L+D D+ K+SDFG+ R D+ S+ VGT
Sbjct: 119 FLESHQF-----IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS----VGTKFPV 169
Query: 345 GYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAW 404
+ +PE + +S KSDV++FG+L+ E S K +S +L K +
Sbjct: 170 KWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL-------KVSQGH 222
Query: 405 KLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIK 449
+L P L ++ +Y ++ C E RPT +++S I+
Sbjct: 223 RLYRPHLASDTIY-------QIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 85
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M Y + D + + ++ ++ + +
Sbjct: 86 QLLGVCTREPPFYIITEFM------------TYGNLLDYLRE-CNRQEVNAVVLLYMATQ 132
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 133 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 189
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 190 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 241
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 242 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 275
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M Y + D + + ++ ++ + +
Sbjct: 75 QLLGVCTREPPFYIITEFM------------TYGNLLDYLRE-CNRQEVNAVVLLYMATQ 121
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 122 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 178
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 179 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 230
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 231 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M Y + D + + ++ ++ + +
Sbjct: 78 QLLGVCTREPPFYIITEFM------------TYGNLLDYLRE-CNRQEVNAVVLLYMATQ 124
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 125 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 182 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 233
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 234 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M Y + D + + ++ ++ + +
Sbjct: 73 QLLGVCTREPPFYIITEFM------------TYGNLLDYLRE-CNRQEVNAVVLLYMATQ 119
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 120 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 177 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 228
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 229 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M +L DY V+ + +
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNL----LDYLRECNRQEVSA---------VVLLYMATQ 119
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 120 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 177 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 228
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 229 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M +L DY V+ + +
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNL----LDYLRECNRQEVSA---------VVLLYMATQ 119
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 120 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 177 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 228
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 229 YRMERPEGCPEKVYELMR-------ACWQWNPSDRPSFAEI 262
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 18/206 (8%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKS--GQGVEEFKNEMILIAKLHHRNLVRLF 226
+ K+G G FG V++ + +G +VAVK L + + V EF E+ ++ +L H N+V
Sbjct: 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G + ++ EY+ SL L + SG ++ LD R+ + +A+
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLL----HKSG--------AREQLDERRRLSMAYDVAK 148
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
G+ YLH + ++HR+LK+ N+L+D K+ DFG++R+ L S GT +
Sbjct: 149 GMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS--KSAAGTPEW 205
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLE 372
M+PE + KSDV+SFGV+L E
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWE 231
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 48/288 (16%)
Query: 166 FSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRN 221
FS+ ++G G FG VY + + N E VA+K++S Q E++++ E+ + KL H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
++ GC + + L+ EY + D K L +
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLL---------------EVHKKPLQEVEIAAVT 121
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
G QGL YLH ++ +IHRD+KA N+LL K+ DFG A + + N V
Sbjct: 122 HGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSA------SIMAPANXFV 172
Query: 342 GTYGYMSPEYAL---HGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH-AWNL 397
GT +M+PE L G + K DV+S G+ +E +++ +N+++++ L H A N
Sbjct: 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNMNAMSALYHIAQN- 229
Query: 398 WKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
P LQ+ + ++ C+Q+ DRPT SEV+
Sbjct: 230 ---------ESPALQSGHWSEYFRNFVDS---CLQKIPQDRPT-SEVL 264
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M +L DY V+ + +
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNL----LDYLRECNRQEVSA---------VVLLYMATQ 124
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 182 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 233
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 234 YRMERPEGCPEKVYELMR-------ACWQWNPSDRPSFAEI 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M +L DY V+ + +
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNL----LDYLRECNRQEVSA---------VVLLYMATQ 119
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 120 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 177 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 228
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 229 YRMERPEGCPEKVYELMR-------ACWQWNPSDRPSFAEI 262
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 48/288 (16%)
Query: 166 FSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRN 221
FS+ ++G G FG VY + + N E VA+K++S Q E++++ E+ + KL H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
++ GC + + L+ EY + D K L +
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLL---------------EVHKKPLQEVEIAAVT 160
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
G QGL YLH ++ +IHRD+KA N+LL K+ DFG A + + N V
Sbjct: 161 HGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSA------SIMAPANXFV 211
Query: 342 GTYGYMSPEYAL---HGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH-AWNL 397
GT +M+PE L G + K DV+S G+ +E +++ +N+++++ L H A N
Sbjct: 212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNMNAMSALYHIAQN- 268
Query: 398 WKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
P LQ+ + ++ C+Q+ DRPT SEV+
Sbjct: 269 ---------ESPALQSGHWSEYFRNFVDS---CLQKIPQDRPT-SEVL 303
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M Y + D + + ++ ++ + +
Sbjct: 75 QLLGVCTREPPFYIITEFM------------TYGNLLDYLRE-CNRQEVNAVVLLYMATQ 121
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 122 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 178
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 179 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 230
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 231 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 264
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G FG VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M +L DY V+ + +
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNL----LDYLRECNRQEVSA---------VVLLYMATQ 117
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 118 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID + L + D
Sbjct: 175 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDP----SQVYELLEKD-- 226
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 227 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 260
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 137/281 (48%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M Y + D + + ++ ++ + +
Sbjct: 74 QLLGVCTREPPFYIITEFM------------TYGNLLDYLRE-CNRQEVNAVVLLYMATQ 120
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD +
Sbjct: 121 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI 177
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 178 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 229
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 230 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 137/281 (48%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M Y + D + + ++ ++ + +
Sbjct: 75 QLLGVCTREPPFYIITEFM------------TYGNLLDYLRE-CNRQEVNAVVLLYMATQ 121
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD +
Sbjct: 122 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI 178
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID L + L + D
Sbjct: 179 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD-- 230
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 231 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 264
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M +L DY V+ + +
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNL----LDYLRECNRQEVSA---------VVLLYMATQ 117
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 118 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI 174
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID + L + D
Sbjct: 175 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDP----SQVYELLEKD-- 226
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 227 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 260
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 134/281 (47%), Gaps = 33/281 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+ + ++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L G C + +I E+M +L DY V+ + +
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNL----LDYLRECNRQEVSA---------VVLLYMATQ 117
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ + YL + IHRDL A N L+ + K++DFG++R+ GD ++
Sbjct: 118 ISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRA 403
+ +PE + FSIKSDV++FGVLL E +++ + + ID + L + D
Sbjct: 175 -KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDP----SQVYELLEKD-- 226
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+++ P E +Y +++ C Q N +DRP+ +E+
Sbjct: 227 YRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 260
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 47/291 (16%)
Query: 169 ENKLGEGGFGPVYKGKL-LNGEE---VAVKRL-SNKSGQGVEEFKNEMILIAKLHHRNLV 223
E +G G G V G+L + G+ VA+K L + + + +F +E ++ + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
RL G +++ EYM N SLD FL + G V ++ G
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD--------------GQFTIMQLVGMLRG 159
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
+ G+ YL S L +HRDL A NVL+D ++ K+SDFG++R+ L+ + + T
Sbjct: 160 VGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV-----LEDDPDAAXTT 211
Query: 344 YG------YMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNL 397
G + +PE FS SDV+SFGV++ E L+ + ++N+ + ++
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP-YWNMTNRDVISSV--- 267
Query: 398 WKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+ ++L P AL+ ++ L C ++ A RP S++VS++
Sbjct: 268 ---EEGYRLPAPMGCPHALH-------QLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 47/291 (16%)
Query: 169 ENKLGEGGFGPVYKGKL-LNGEE---VAVKRL-SNKSGQGVEEFKNEMILIAKLHHRNLV 223
E +G G G V G+L + G+ VA+K L + + + +F +E ++ + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
RL G +++ EYM N SLD FL + G V ++ G
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD--------------GQFTIMQLVGMLRG 159
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
+ G+ YL S L +HRDL A NVL+D ++ K+SDFG++R+ L+ + + T
Sbjct: 160 VGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV-----LEDDPDAAYTT 211
Query: 344 YG------YMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNL 397
G + +PE FS SDV+SFGV++ E L+ + ++N+ + ++
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP-YWNMTNRDVISSV--- 267
Query: 398 WKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMI 448
+ ++L P AL+ ++ L C ++ A RP S++VS++
Sbjct: 268 ---EEGYRLPAPMGCPHALH-------QLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 125
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 126 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 126
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 127 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 76 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 125
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 126 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 73 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 122
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 123 -----IAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 174
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 175 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIG--------SQYLLNWCVQ- 126
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 127 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 79 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 128
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 129 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 129
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 130 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 181
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 70 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 119
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 120 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 171
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 172 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 128
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 129 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 125
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 126 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 128
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 129 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 86 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 135
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 136 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 187
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 188 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 128
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 129 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 127
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 128 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 127
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 128 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 82 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 131
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 132 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 183
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 184 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 32/216 (14%)
Query: 172 LGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSG-QGVEEFKNEMILIAKLHHRNLVRL 225
LGEG FG V Y + N GE+VAVK L +SG + + K E+ ++ L+H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 226 FGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
G C E G LI E++P+ SL +L P +K ++ +++
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL--------------PKNKNKINLKQQLKYAVQ 134
Query: 284 IAQGLLYL--HQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM--NR 339
I +G+ YL QY +HRDL A NVL++ + KI DFG+ + D+ + +R
Sbjct: 135 ICKGMDYLGSRQY-----VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 189
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+ Y +PE + F I SDV+SFGV L E L+
Sbjct: 190 DSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIG--------SQYLLNWCVQ- 125
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 126 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 132
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 133 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 134/282 (47%), Gaps = 33/282 (11%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGC 228
E KLG G FG V+ +VAVK + S VE F E ++ L H LV+L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
++ I I E+M SL FL K G P K ++D++ + IA+G+
Sbjct: 79 VTKEPIYI-ITEFMAKGSLLDFL---KSDEG---SKQPLPK-LIDFSAQ------IAEGM 124
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMS 348
++ Q + IHRDL+A+N+L+ + KI+DFG+AR+ +E + + +
Sbjct: 125 AFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-KWTA 180
Query: 349 PEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLD 408
PE G F+IKSDV+SFG+LL+E ++ Y + + + +R +++
Sbjct: 181 PEAINFGSFTIKSDVWSFGILLMEIVT-------YGRIPYPGMSNPEVIRALERGYRMPR 233
Query: 409 PTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
P E LY ++ R C + +RPT + S++ +
Sbjct: 234 PENCPEELYNIMMR-------CWKNRPEERPTFEYIQSVLDD 268
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 101 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 150
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 151 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 202
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 203 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 32/216 (14%)
Query: 172 LGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSG-QGVEEFKNEMILIAKLHHRNLVRL 225
LGEG FG V Y + N GE+VAVK L +SG + + K E+ ++ L+H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 226 FGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
G C E G LI E++P+ SL +L P +K ++ +++
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL--------------PKNKNKINLKQQLKYAVQ 122
Query: 284 IAQGLLYL--HQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM--NR 339
I +G+ YL QY +HRDL A NVL++ + KI DFG+ + D+ + +R
Sbjct: 123 ICKGMDYLGSRQY-----VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 177
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+ Y +PE + F I SDV+SFGV L E L+
Sbjct: 178 DSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 140/310 (45%), Gaps = 36/310 (11%)
Query: 155 SLASISTATHN--FSEENKLGEGGFGPV--YKGKLLN---GEEVAVKRLSNKSG-QGVEE 206
S AS T H + LGEG FG V Y N GE VAVK L G Q
Sbjct: 3 SPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSG 62
Query: 207 FKNEMILIAKLHHRNLVRLFGCCIEQGEKIL--IYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+K E+ ++ L+H ++++ GCC +QGEK L + EY+P SL +L ++S G +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP--RHSIGLAQL- 119
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ + I +G+ YLH IHR+L A NVLLD D KI DFG+
Sbjct: 120 -------------LLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGL 163
Query: 325 ARMFG-GDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFY 383
A+ G E + +PE F SDV+SFGV L E L+ +++
Sbjct: 164 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 223
Query: 384 NIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALL---CVQENAADRPT 440
L L+G A R +LL+ + E L K +V L C + A+ RPT
Sbjct: 224 PTKFLELIGIAQGQMTVLRLTELLE---RGERLPRPDKCPCEVYHLMKNCWETEASFRPT 280
Query: 441 MSEVVSMIKN 450
++ ++K
Sbjct: 281 FENLIPILKT 290
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 33/277 (11%)
Query: 169 ENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFG 227
++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV+L G
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
C + +I E+M Y + D + + ++ ++ + + I+
Sbjct: 323 VCTREPPFYIITEFM------------TYGNLLDYLRE-CNRQEVNAVVLLYMATQISSA 369
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
+ YL + IHR+L A N L+ + K++DFG++R+ GD ++ +
Sbjct: 370 MEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWT 425
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLL 407
+PE + FSIKSDV++FGVLL E +++ + + ID L + L + D +++
Sbjct: 426 APESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD--YRME 478
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
P E +Y +++ C Q N +DRP+ +E+
Sbjct: 479 RPEGCPEKVYELMR-------ACWQWNPSDRPSFAEI 508
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 33/277 (11%)
Query: 169 ENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFG 227
++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV+L G
Sbjct: 222 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
C + +I E+M +L +L + ++ ++ + + I+
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRE-------------CNRQEVNAVVLLYMATQISSA 327
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
+ YL + IHR+L A N L+ + K++DFG++R+ GD ++ +
Sbjct: 328 MEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWT 383
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLL 407
+PE + FSIKSDV++FGVLL E +++ + + ID L + L + D +++
Sbjct: 384 APESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD--YRME 436
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
P E +Y +++ C Q N +DRP+ +E+
Sbjct: 437 RPEGCPEKVYELMR-------ACWQWNPSDRPSFAEI 466
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 134/282 (47%), Gaps = 33/282 (11%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGC 228
E KLG G FG V+ +VAVK + S VE F E ++ L H LV+L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
++ I I E+M SL FL K G P K ++D++ + IA+G+
Sbjct: 252 VTKEPIYI-ITEFMAKGSLLDFL---KSDEG---SKQPLPK-LIDFSAQ------IAEGM 297
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMS 348
++ Q + IHRDL+A+N+L+ + KI+DFG+AR+ +E + + +
Sbjct: 298 AFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTA 353
Query: 349 PEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLD 408
PE G F+IKSDV+SFG+LL+E ++ Y + + + +R +++
Sbjct: 354 PEAINFGSFTIKSDVWSFGILLMEIVT-------YGRIPYPGMSNPEVIRALERGYRMPR 406
Query: 409 PTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
P E LY ++ R C + +RPT + S++ +
Sbjct: 407 PENCPEELYNIMMR-------CWKNRPEERPTFEYIQSVLDD 441
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 140/310 (45%), Gaps = 36/310 (11%)
Query: 155 SLASISTATHN--FSEENKLGEGGFGPV--YKGKLLN---GEEVAVKRLSNKSG-QGVEE 206
S AS T H + LGEG FG V Y N GE VAVK L G Q
Sbjct: 3 SPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSG 62
Query: 207 FKNEMILIAKLHHRNLVRLFGCCIEQGEKIL--IYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+K E+ ++ L+H ++++ GCC +QGEK L + EY+P SL +L ++S G +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP--RHSIGLAQL- 119
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ + I +G+ YLH IHR+L A NVLLD D KI DFG+
Sbjct: 120 -------------LLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGL 163
Query: 325 ARMFG-GDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFY 383
A+ G E + +PE F SDV+SFGV L E L+ +++
Sbjct: 164 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 223
Query: 384 NIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALL---CVQENAADRPT 440
L L+G A R +LL+ + E L K +V L C + A+ RPT
Sbjct: 224 PTKFLELIGIAQGQMTVLRLTELLE---RGERLPRPDKCPCEVYHLMKNCWETEASFRPT 280
Query: 441 MSEVVSMIKN 450
++ ++K
Sbjct: 281 FENLIPILKT 290
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 169 ENKLGEGGFGPVYKGKLLNGE-EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFG 227
++KLG G +G VY+G VAVK L + + VEEF E ++ ++ H NLV+L G
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
C + +I E+M + L DY V+ + + I+
Sbjct: 284 VCTREPPFYIITEFMTYGN----LLDYLRECNRQEVSA---------VVLLYMATQISSA 330
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
+ YL + IHR+L A N L+ + K++DFG++R+ GD ++ +
Sbjct: 331 MEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWT 386
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLL 407
+PE + FSIKSDV++FGVLL E +++ + + ID L + L + D +++
Sbjct: 387 APESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVYELLEKD--YRME 439
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
P E +Y +++ C Q N +DRP+ +E+
Sbjct: 440 RPEGCPEKVYELMR-------ACWQWNPSDRPSFAEI 469
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 145/298 (48%), Gaps = 41/298 (13%)
Query: 167 SEENKLGEGGFGPVYKGKLLNG---EEVAVKRLSNKSGQGVEE---FKNEMILIAKLHHR 220
+ + +G G FG VYKG L +EV V + K+G ++ F E ++ + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 221 NLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
N++RL G + ++I EYM N +LD FL + G V +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLRE--------------KDGEFSVLQLVGM 152
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+ GIA G+ YL + + +HRDL A N+L++ ++ K+SDFG++R+ D+ ++
Sbjct: 153 LRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL-EDDPEATYTTS 208
Query: 341 VGTYG--YMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLW 398
G + +PE + F+ SDV+SFG+++ E ++ + ++ + + ++
Sbjct: 209 GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP-YWELSNHEVMKAI---- 263
Query: 399 KDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLP 456
+ ++L P A+Y ++ + C Q+ A RP +++VS++ ++++ P
Sbjct: 264 --NDGFRLPTPMDCPSAIY-------QLMMQCWQQERARRPKFADIVSIL-DKLIRAP 311
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 115/217 (52%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 129
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG A++ G +E + +
Sbjct: 130 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 181
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 115/217 (52%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 127
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG A++ G +E + +
Sbjct: 128 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 115/217 (52%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 127
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG A++ G +E + +
Sbjct: 128 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 115/217 (52%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 127
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG A++ G +E + +
Sbjct: 128 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 115/217 (52%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 125
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG A++ G +E + +
Sbjct: 126 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 169 ENKLGEGGFGPVYKGKL-LNGEE---VAVKRL-SNKSGQGVEEFKNEMILIAKLHHRNLV 223
E +G G FG V G+L + G+ VA+K L + + + +F +E ++ + H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L G + ++I EYM N SLD FL K F ++ V ++ G
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVIQ------------LVGMLRG 139
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG- 342
I G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ D + R G
Sbjct: 140 IGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR--GG 194
Query: 343 --TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+ +PE + F+ SDV+S+G+++ E +S + ++++ + ++
Sbjct: 195 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-YWDMSNQDVIKAI------ 247
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
+ ++L P AL+ ++ L C Q+ +DRP ++V+M+ I N
Sbjct: 248 EEGYRLPPPMDCPIALH-------QLMLDCWQKERSDRPKFGQIVNMLDKLIRN 294
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 115/217 (52%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 132
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG A++ G +E + +
Sbjct: 133 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 184
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 115/217 (52%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + L G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 125
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 126 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 29/252 (11%)
Query: 131 RAKEFCEGDSAAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGK-LLNGE 189
R++ G S G + F S + + + + LG+G FG V K + G+
Sbjct: 16 RSRGHAAGTSGGPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQ 75
Query: 190 EVAVKRLSN---KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKS 246
E AVK +S K E E+ L+ +L H N+++L YE+ +K
Sbjct: 76 ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL-------------YEFFEDKG 122
Query: 247 LDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKA 306
F+L Y+ G ++ + S+ RII + G+ Y+H+ +++HRDLK
Sbjct: 123 Y-FYLVGEVYTGG-ELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKP 177
Query: 307 SNVLLDG---DMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDV 363
N+LL+ D N +I DFG++ F E M +GT Y++PE LHG + K DV
Sbjct: 178 ENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDV 233
Query: 364 FSFGVLLLETLS 375
+S GV+L LS
Sbjct: 234 WSTGVILYILLS 245
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 115/217 (52%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + L G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 83 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 132
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 133 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 169 ENKLGEGGFGPVYKGKL-LNGEE---VAVKRL-SNKSGQGVEEFKNEMILIAKLHHRNLV 223
E +G G FG V G+L + G+ VA+K L + + + +F +E ++ + H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L G + ++I EYM N SLD FL K F ++ V ++ G
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVIQ------------LVGMLRG 124
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG- 342
I G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ D + R G
Sbjct: 125 IGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR--GG 179
Query: 343 --TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+ +PE + F+ SDV+S+G+++ E +S + ++++ + ++
Sbjct: 180 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-YWDMSNQDVIKAI------ 232
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
+ ++L P AL+ ++ L C Q+ +DRP ++V+M+ I N
Sbjct: 233 EEGYRLPPPMDCPIALH-------QLMLDCWQKERSDRPKFGQIVNMLDKLIRN 279
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 29/252 (11%)
Query: 131 RAKEFCEGDSAAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGK-LLNGE 189
R++ G S G + F S + + + + LG+G FG V K + G+
Sbjct: 17 RSRGHAAGTSGGPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQ 76
Query: 190 EVAVKRLSN---KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKS 246
E AVK +S K E E+ L+ +L H N+++L YE+ +K
Sbjct: 77 ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL-------------YEFFEDKG 123
Query: 247 LDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKA 306
F+L Y+ G ++ + S+ RII + G+ Y+H+ +++HRDLK
Sbjct: 124 Y-FYLVGEVYTGG-ELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKP 178
Query: 307 SNVLLDG---DMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDV 363
N+LL+ D N +I DFG++ F E M +GT Y++PE LHG + K DV
Sbjct: 179 ENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDV 234
Query: 364 FSFGVLLLETLS 375
+S GV+L LS
Sbjct: 235 WSTGVILYILLS 246
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 137/269 (50%), Gaps = 35/269 (13%)
Query: 189 EEVAVKRLS-NKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSL 247
E+VA+KR++ K ++E E+ +++ HH N+V + + + E L+ + + S+
Sbjct: 36 EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 95
Query: 248 DFFLFDYKYSSGFDMVTDPASKG-----ILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHR 302
D++ +KG +LD +T I+ + +GL YLH+ + IHR
Sbjct: 96 ------------LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHR 140
Query: 303 DLKASNVLLDGDMNPKISDFGIARMF--GGDELQSNMNR-IVGTYGYMSPEY--ALHGLF 357
D+KA N+LL D + +I+DFG++ GGD ++ + + VGT +M+PE + G +
Sbjct: 141 DVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-Y 199
Query: 358 SIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQN-EAL 416
K+D++SFG+ +E + Y + +L L D + L+ +Q+ E L
Sbjct: 200 DFKADIWSFGITAIELATGAAPYHKYPPMKVLML----TLQNDPPS---LETGVQDKEML 252
Query: 417 YPMVKRYIKVALLCVQENAADRPTMSEVV 445
K + K+ LC+Q++ RPT +E++
Sbjct: 253 KKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 115/217 (52%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + L G FG VYKG + GE+V A+K L S + +E +E ++A +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 132
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 133 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 169 ENKLGEGGFGPVYKGKL-LNGEE---VAVKRL-SNKSGQGVEEFKNEMILIAKLHHRNLV 223
E +G G FG V G+L + G+ VA+K L + + + +F +E ++ + H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L G + ++I EYM N SLD FL K F ++ V ++ G
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVIQ------------LVGMLRG 118
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG- 342
I G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+ D + R G
Sbjct: 119 IGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR--GG 173
Query: 343 --TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+ +PE + F+ SDV+S+G+++ E +S + ++++ + ++
Sbjct: 174 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-YWDMSNQDVIKAI------ 226
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
+ ++L P AL+ ++ L C Q+ +DRP ++V+M+ I N
Sbjct: 227 EEGYRLPPPMDCPIALH-------QLMLDCWQKERSDRPKFGQIVNMLDKLIRN 273
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 115/217 (52%), Gaps = 24/217 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEV----AVKRLSN-KSGQGVEEFKNEMILIAKLH 218
F + LG G FG VYKG + GE+V A+ L S + +E +E ++A +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
+ ++ RL G C+ + LI + MP L ++ ++K + G S+ +L+W +
Sbjct: 110 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG--------SQYLLNWCVQ- 159
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
IA+G+ YL R++HRDL A NVL+ + KI+DFG+A++ G +E + +
Sbjct: 160 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 211
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E LH +++ +SDV+S+GV + E ++
Sbjct: 212 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 137/269 (50%), Gaps = 35/269 (13%)
Query: 189 EEVAVKRLS-NKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSL 247
E+VA+KR++ K ++E E+ +++ HH N+V + + + E L+ + + S+
Sbjct: 41 EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100
Query: 248 DFFLFDYKYSSGFDMVTDPASKG-----ILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHR 302
D++ +KG +LD +T I+ + +GL YLH+ + IHR
Sbjct: 101 ------------LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHR 145
Query: 303 DLKASNVLLDGDMNPKISDFGIARMF--GGDELQSNMNR-IVGTYGYMSPEY--ALHGLF 357
D+KA N+LL D + +I+DFG++ GGD ++ + + VGT +M+PE + G +
Sbjct: 146 DVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-Y 204
Query: 358 SIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQN-EAL 416
K+D++SFG+ +E + Y + +L L D + L+ +Q+ E L
Sbjct: 205 DFKADIWSFGITAIELATGAAPYHKYPPMKVLML----TLQNDPPS---LETGVQDKEML 257
Query: 417 YPMVKRYIKVALLCVQENAADRPTMSEVV 445
K + K+ LC+Q++ RPT +E++
Sbjct: 258 KKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 128/295 (43%), Gaps = 42/295 (14%)
Query: 172 LGEGGFGPV--YKGKLLN---GEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRL 225
LGEG FG V Y N GE VAVK L G + ++ E+ ++ L+H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 226 FGCCIEQGEKI--LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
GCC +QGEK L+ EY+P SL +L + + + +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----------------PRHCVGLAQLLLFAQQ 120
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG-GDELQSNMNRIVG 342
I +G+ YLH IHR L A NVLLD D KI DFG+A+ G E
Sbjct: 121 ICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 177
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDR 402
+ +PE F SDV+SFGV L E L+ + + + L+GH R
Sbjct: 178 PVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLR 237
Query: 403 AWKLLD-------PTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
+LL+ P +Y ++K C + A+ RPT +V +++
Sbjct: 238 LTELLERGERLPRPDRCPCEIYHLMKN-------CWETEASFRPTFQNLVPILQT 285
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 128/295 (43%), Gaps = 42/295 (14%)
Query: 172 LGEGGFGPV--YKGKLLN---GEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRL 225
LGEG FG V Y N GE VAVK L G + ++ E+ ++ L+H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 226 FGCCIEQGEKI--LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
GCC +QGEK L+ EY+P SL +L + + + +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----------------PRHCVGLAQLLLFAQQ 119
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG-GDELQSNMNRIVG 342
I +G+ YLH IHR L A NVLLD D KI DFG+A+ G E
Sbjct: 120 ICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 176
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDR 402
+ +PE F SDV+SFGV L E L+ + + + L+GH R
Sbjct: 177 PVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLR 236
Query: 403 AWKLLD-------PTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
+LL+ P +Y ++K C + A+ RPT +V +++
Sbjct: 237 LTELLERGERLPRPDRCPCEIYHLMKN-------CWETEASFRPTFQNLVPILQT 284
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 23/230 (10%)
Query: 164 HNFSEENKLGEGGFGPVYKGK---LLNGEE---VAVKRLSNKSGQGVE-EFKNEMILIAK 216
+N +GEG FG V++ + LL E VAVK L ++ ++ +F+ E L+A+
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 217 LHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFL----------FDYKYSSGFDMVTDP 266
+ N+V+L G C L++EYM L+ FL + S V+ P
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 267 ASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIAR 326
L ++ I +A G+ YL S + +HRDL N L+ +M KI+DFG++R
Sbjct: 167 GPPP-LSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 327 -MFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
++ D +++ N + +M PE + ++ +SDV+++GV+L E S
Sbjct: 223 NIYSADYYKADGNDAIPI-RWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 142/312 (45%), Gaps = 54/312 (17%)
Query: 162 ATHNFSEENK---------LGEGGFGPVYKGKL-LNGEE---VAVKRLS-NKSGQGVEEF 207
A H F++E + +G G FG V G+L L G+ VA+K L + + +F
Sbjct: 11 AVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDF 70
Query: 208 KNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPA 267
E ++ + H N++ L G + +++ EYM N SLD FL K F ++
Sbjct: 71 LGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTVIQ--- 125
Query: 268 SKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARM 327
V ++ GI+ G+ YL S + +HRDL A N+L++ ++ K+SDFG++R+
Sbjct: 126 ---------LVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 173
Query: 328 FGGDELQSNMNRIVG---TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS--SKKNTRF 382
D + R G + +PE F+ SDV+S+G+++ E +S +
Sbjct: 174 LEDDPEAAYTTR--GGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEM 231
Query: 383 YNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMS 442
N D + + + ++L P ALY ++ L C Q+ RP
Sbjct: 232 TNQDVIKAV---------EEGYRLPSPMDCPAALY-------QLMLDCWQKERNSRPKFD 275
Query: 443 EVVSMIKNEIVN 454
E+V+M+ I N
Sbjct: 276 EIVNMLDKLIRN 287
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 136/315 (43%), Gaps = 39/315 (12%)
Query: 153 FFSLASI------STATHNFSEENKLGEGGFGPVYKG------KLLNGEEVAVKRLSNKS 200
+FS A + A + +LG+G FG VY+G K VA+K ++ +
Sbjct: 8 YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 67
Query: 201 GQGVE-EFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSG 259
EF NE ++ + + ++VRL G + ++I E M L +L + +
Sbjct: 68 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMA 127
Query: 260 FDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKI 319
+ V P S + +++ IA G+ YL+ + +HRDL A N ++ D KI
Sbjct: 128 NNPVLAPPS-----LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 179
Query: 320 SDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSK 377
DFG+ R + + + +MSPE G+F+ SDV+SFGV+L E TL+ +
Sbjct: 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 239
Query: 378 KNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAAD 437
N L + L K D +L ++ +C Q N
Sbjct: 240 PYQGLSNEQVLRFVMEGGLLDKPDNCPDML----------------FELMRMCWQYNPKM 283
Query: 438 RPTMSEVVSMIKNEI 452
RP+ E++S IK E+
Sbjct: 284 RPSFLEIISSIKEEM 298
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 135/315 (42%), Gaps = 40/315 (12%)
Query: 161 TATHNFSEENKLGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVE-EFKNEMIL 213
A + +LG+G FG VY+G K VA+K ++ + EF NE +
Sbjct: 7 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
+ + + ++VRL G + ++I E M L +L + + V P S
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS----- 121
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL 333
+ +++ IA G+ YL+ + +HRDL A N ++ D KI DFG+ R +
Sbjct: 122 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 178
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLL 391
+ + +MSPE G+F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 179 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 238
Query: 392 GHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNE 451
L K D +L +++ +C Q N RP+ E++S IK E
Sbjct: 239 MEGGLLDKPDNCPDML----------------LELMRMCWQYNPKMRPSFLEIISSIKEE 282
Query: 452 IVNLPSPQQPAFSYV 466
+ +P F V
Sbjct: 283 M-------EPGFREV 290
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 25/232 (10%)
Query: 170 NKLGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LG+G FG V Y N GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 225 LFGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G C G + LI EY+P SL +L K+ D + +L +T++
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK------LLQYTSQ----- 127
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-V 341
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D+ +
Sbjct: 128 -ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 183
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 184 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 235
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 25/232 (10%)
Query: 170 NKLGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LG+G FG V Y N GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 225 LFGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G C G + LI EY+P SL +L K+ D + +L +T++
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK------LLQYTSQ----- 126
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-V 341
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D+ +
Sbjct: 127 -ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 182
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 183 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 234
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 142/290 (48%), Gaps = 40/290 (13%)
Query: 169 ENKLGEGGFGPVYKGKLLNG---EEVAVKRLSN-KSGQGVEEFKNEMILIAKL-HHRNLV 223
++ +GEG FG V K ++ + A+KR+ S +F E+ ++ KL HH N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPA------SKGILDWTTR 277
L G C +G L EY P+ +L FL + + TDPA + L
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV-----LETDPAFAIANSTASTLSSQQL 144
Query: 278 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE--LQS 335
+ +A+G+ YL S+ + IHRDL A N+L+ + KI+DFG++R G E ++
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK 198
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAW 395
M R+ +M+ E + +++ SDV+S+GVLL E +S T + + L
Sbjct: 199 TMGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL-GGTPYCGMTCAELYE--- 252
Query: 396 NLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
K + ++L P ++ +Y ++++ C +E +RP+ ++++
Sbjct: 253 ---KLPQGYRLEKPLNCDDEVYDLMRQ-------CWREKPYERPSFAQIL 292
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 25/232 (10%)
Query: 170 NKLGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LG+G FG V Y N GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 225 LFGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G C G + LI EY+P SL +L K+ D + +L +T++
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK------LLQYTSQ----- 125
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-V 341
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D+ +
Sbjct: 126 -ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 233
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 142/290 (48%), Gaps = 40/290 (13%)
Query: 169 ENKLGEGGFGPVYKGKLLNG---EEVAVKRLSN-KSGQGVEEFKNEMILIAKL-HHRNLV 223
++ +GEG FG V K ++ + A+KR+ S +F E+ ++ KL HH N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPA------SKGILDWTTR 277
L G C +G L EY P+ +L FL + + TDPA + L
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV-----LETDPAFAIANSTASTLSSQQL 134
Query: 278 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE--LQS 335
+ +A+G+ YL S+ + IHRDL A N+L+ + KI+DFG++R G E ++
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK 188
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAW 395
M R+ +M+ E + +++ SDV+S+GVLL E +S T + + L
Sbjct: 189 TMGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL-GGTPYCGMTCAELYE--- 242
Query: 396 NLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
K + ++L P ++ +Y ++++ C +E +RP+ ++++
Sbjct: 243 ---KLPQGYRLEKPLNCDDEVYDLMRQ-------CWREKPYERPSFAQIL 282
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 25/232 (10%)
Query: 170 NKLGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LG+G FG V Y N GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 225 LFGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G C G + LI EY+P SL +L K+ D + +L +T++
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK------LLQYTSQ----- 121
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-V 341
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D+ +
Sbjct: 122 -ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 177
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 178 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 229
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 25/232 (10%)
Query: 170 NKLGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LG+G FG V Y N GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 225 LFGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G C G + LI EY+P SL +L K+ D + +L +T++
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK------LLQYTSQ----- 120
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-V 341
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D+ +
Sbjct: 121 -ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 176
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 177 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 228
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 25/232 (10%)
Query: 170 NKLGEGGFGPVYKGKLL-----NGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LG+G FG V + GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 225 LFGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G C G + LI EY+P SL +L K+ D + +L +T++
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK------LLQYTSQ----- 128
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-V 341
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D+ +
Sbjct: 129 -ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 184
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 185 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 236
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 141/315 (44%), Gaps = 52/315 (16%)
Query: 136 CEGDSAAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKR 195
C K K++W I + E KLG G FG V+ +VAVK
Sbjct: 163 CMSSKPQKPWEKDAWEI---------PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKT 213
Query: 196 LSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYK 255
+ S VE F E ++ L H LV+L ++ I I E+M SL FL K
Sbjct: 214 MKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYI-ITEFMAKGSLLDFL---K 268
Query: 256 YSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDM 315
G P K ++D++ + IA+G+ ++ Q + IHRDL+A+N+L+ +
Sbjct: 269 SDEG---SKQPLPK-LIDFSAQ------IAEGMAFIEQRN---YIHRDLRAANILVSASL 315
Query: 316 NPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
KI+DFG+AR+ ++ + +PE G F+IKSDV+SFG+LL+E ++
Sbjct: 316 VCKIADFGLARVGAKFPIK-----------WTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
Query: 376 SKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENA 435
Y + + + +R +++ P E LY ++ R C +
Sbjct: 365 -------YGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMR-------CWKNRP 410
Query: 436 ADRPTMSEVVSMIKN 450
+RPT + S++ +
Sbjct: 411 EERPTFEYIQSVLDD 425
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 25/232 (10%)
Query: 170 NKLGEGGFGPVYKGKL-----LNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LG+G FG V + GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 225 LFGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G C G + LI EY+P SL +L K+ D + +L +T++
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK------LLQYTSQ----- 122
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-V 341
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D+ +
Sbjct: 123 -ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 25/232 (10%)
Query: 170 NKLGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LG+G FG V Y N GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 225 LFGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G C G + LI EY+P SL +L K+ D + +L +T++
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK------LLQYTSQ----- 153
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-V 341
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D+ +
Sbjct: 154 -ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 209
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 210 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 261
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 25/232 (10%)
Query: 170 NKLGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LG+G FG V Y N GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 225 LFGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G C G + LI EY+P SL +L K+ D + +L +T++
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK------LLQYTSQ----- 122
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-V 341
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D+ +
Sbjct: 123 -ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 25/232 (10%)
Query: 170 NKLGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LG+G FG V Y N GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 225 LFGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G C G + LI EY+P SL +L K+ D + +L +T++
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK------LLQYTSQ----- 129
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-V 341
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D+ +
Sbjct: 130 -ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 185
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 186 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 237
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 31/219 (14%)
Query: 172 LGEGGFGPVYKGKL------LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVR 224
LG G FG VY+G++ + +VAVK L + E +F E ++I+KL+H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G ++ + ++ E M L FL + + + P+S +LD + + I
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-----SQPSSLAMLDL---LHVARDI 150
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARMFGGDELQSNMNRI 340
A G YL + IHRD+ A N LL G + KI DFG+AR D +++ R
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----DIYRASYYRK 202
Query: 341 VG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
G +M PE + G+F+ K+D +SFGVLL E S
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 131/301 (43%), Gaps = 33/301 (10%)
Query: 161 TATHNFSEENKLGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVE-EFKNEMIL 213
A + +LG+G FG VY+G K VA+K ++ + EF NE +
Sbjct: 12 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 71
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
+ + + ++VRL G + ++I E M L +L + + + V P S
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS----- 126
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL 333
+ +++ IA G+ YL+ + +HRDL A N ++ D KI DFG+ R +
Sbjct: 127 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 183
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLL 391
+ + +MSPE G+F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 184 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 243
Query: 392 GHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNE 451
L K D +L ++ +C Q N RP+ E++S IK E
Sbjct: 244 MEGGLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEE 287
Query: 452 I 452
+
Sbjct: 288 M 288
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 31/219 (14%)
Query: 172 LGEGGFGPVYKGKL------LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVR 224
LG G FG VY+G++ + +VAVK L + E +F E ++I+KL+H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G ++ + ++ E M L FL + + + P+S +LD + + I
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-----SQPSSLAMLDL---LHVARDI 164
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARMFGGDELQSNMNRI 340
A G YL + IHRD+ A N LL G + KI DFG+AR D +++ R
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----DIYRASYYRK 216
Query: 341 VG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
G +M PE + G+F+ K+D +SFGVLL E S
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 130/301 (43%), Gaps = 33/301 (10%)
Query: 161 TATHNFSEENKLGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVE-EFKNEMIL 213
A + +LG+G FG VY+G K VA+K ++ + EF NE +
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
+ + + ++VRL G + ++I E M L +L + + V P S
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS----- 130
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL 333
+ +++ IA G+ YL+ + +HRDL A N ++ D KI DFG+ R +
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 187
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLL 391
+ + +MSPE G+F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 188 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 247
Query: 392 GHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNE 451
L K D +L ++ +C Q N RP+ E++S IK E
Sbjct: 248 MEGGLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEE 291
Query: 452 I 452
+
Sbjct: 292 M 292
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 29/229 (12%)
Query: 154 FSLASISTATHNFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSN---KSGQGVEEFKN 209
F S + + + + LG+G FG V K + G+E AVK +S K E
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 81
Query: 210 EMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASK 269
E+ L+ +L H N+++L YE+ +K F+L Y+ G ++ + S+
Sbjct: 82 EVQLLKQLDHPNIMKL-------------YEFFEDKGY-FYLVGEVYTGG-ELFDEIISR 126
Query: 270 GILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDG---DMNPKISDFGIAR 326
RII + G+ Y+H + +++HRDLK N+LL+ D N +I DFG++
Sbjct: 127 KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 183
Query: 327 MFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
F E M +GT Y++PE LHG + K DV+S GV+L LS
Sbjct: 184 HF---EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 228
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 39/294 (13%)
Query: 169 ENKLGEGGFGPVYKGKL-LNGEE---VAVKRL-SNKSGQGVEEFKNEMILIAKLHHRNLV 223
E +G G FG V G L L G+ VA+K L S + + +F +E ++ + H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L G + ++I E+M N SLD FL + G V ++ G
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQ--------------NDGQFTVIQLVGMLRG 143
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG- 342
IA G+ YL + + +HRDL A N+L++ ++ K+SDFG++R D +G
Sbjct: 144 IAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 200
Query: 343 --TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+ +PE + F+ SDV+S+G+++ E +S + ++++ + ++
Sbjct: 201 KIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP-YWDMTNQDVINAI------ 253
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
++ ++L P AL+ ++ L C Q++ RP ++V+ + I N
Sbjct: 254 EQDYRLPPPMDCPSALH-------QLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 300
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 116/231 (50%), Gaps = 25/231 (10%)
Query: 171 KLGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRL 225
+LG+G FG V Y N GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 226 FGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
G C G + LI EY+P SL +L K+ D + +L +T++
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK------LLQYTSQ------ 140
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-VG 342
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D+ +
Sbjct: 141 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 198 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 248
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 29/230 (12%)
Query: 153 FFSLASISTATHNFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSN---KSGQGVEEFK 208
F S + + + + LG+G FG V K + G+E AVK +S K E
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 209 NEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPAS 268
E+ L+ +L H N+++L YE+ +K F+L Y+ G ++ + S
Sbjct: 75 REVQLLKQLDHPNIMKL-------------YEFFEDKGY-FYLVGEVYTGG-ELFDEIIS 119
Query: 269 KGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDG---DMNPKISDFGIA 325
+ RII + G+ Y+H+ +++HRDLK N+LL+ D N +I DFG++
Sbjct: 120 RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Query: 326 RMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
F E M +GT Y++PE LHG + K DV+S GV+L LS
Sbjct: 177 THF---EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 222
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 136/300 (45%), Gaps = 47/300 (15%)
Query: 172 LGEGGFGPVYKGKLLN-GEE-----VAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRNLV 223
LG G FG V + G+E VAVK L S E +E+ +++ L H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFL-------FDYKYSSGFDMVTDPASKGILDWTT 276
L G C G ++I EY L FL +Y Y+ + +S+ +L +++
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN 336
+V AQG+ +L + IHRD+ A NVLL KI DFG+AR ++ ++
Sbjct: 174 QV------AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMND 219
Query: 337 MNRIVG-----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLL 391
N IV +M+PE +++++SDV+S+G+LL E S N + +
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILVN 275
Query: 392 GHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNE 451
+ L KD +++ P + +Y +++ C RPT ++ S ++ +
Sbjct: 276 SKFYKLVKD--GYQMAQPAFAPKNIYSIMQ-------ACWALEPTHRPTFQQICSFLQEQ 326
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 25/231 (10%)
Query: 171 KLGEGGFGPVYKGKL-----LNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRL 225
+LG+G FG V + GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 226 FGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
G C G + LI EY+P SL +L K+ D + +L +T++
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK------LLQYTSQ------ 140
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-VG 342
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D+ +
Sbjct: 141 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 198 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 248
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ S+D L D+ +S + P K L
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL---SMD--LKDFMDASALTGIPLPLIKSYL--------- 112
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 168
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 135/315 (42%), Gaps = 39/315 (12%)
Query: 153 FFSLASI------STATHNFSEENKLGEGGFGPVYKG------KLLNGEEVAVKRLSNKS 200
+FS A + A + +LG+G FG VY+G K VA+K ++ +
Sbjct: 8 YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 67
Query: 201 GQGVE-EFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSG 259
EF NE ++ + + ++VRL G + ++I E M L +L +
Sbjct: 68 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 127
Query: 260 FDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKI 319
+ V P S + +++ IA G+ YL+ + +HRDL A N ++ D KI
Sbjct: 128 NNPVLAPPS-----LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 179
Query: 320 SDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSK 377
DFG+ R + + + +MSPE G+F+ SDV+SFGV+L E TL+ +
Sbjct: 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 239
Query: 378 KNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAAD 437
N L + L K D +L ++ +C Q N
Sbjct: 240 PYQGLSNEQVLRFVMEGGLLDKPDNCPDML----------------FELMRMCWQYNPKM 283
Query: 438 RPTMSEVVSMIKNEI 452
RP+ E++S IK E+
Sbjct: 284 RPSFLEIISSIKEEM 298
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ S+D L D+ +S + P K L
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL---SMD--LKDFMDASALTGIPLPLIKSYL--------- 111
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 112 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 167
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 31/219 (14%)
Query: 172 LGEGGFGPVYKGKL------LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVR 224
LG G FG VY+G++ + +VAVK L + E +F E ++I+K +H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G ++ + ++ E M L FL + + + P+S +LD + + I
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-----SQPSSLAMLDL---LHVARDI 149
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARMFGGDELQSNMNRI 340
A G YL + IHRD+ A N LL G + KI DFG+AR D +++ R
Sbjct: 150 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----DIYRASYYRK 201
Query: 341 VG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
G +M PE + G+F+ K+D +SFGVLL E S
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 31/219 (14%)
Query: 172 LGEGGFGPVYKGKL------LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVR 224
LG G FG VY+G++ + +VAVK L + E +F E ++I+K +H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G ++ + ++ E M L FL + + + P+S +LD + + I
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP-----SQPSSLAMLDL---LHVARDI 149
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARMFGGDELQSNMNRI 340
A G YL + IHRD+ A N LL G + KI DFG+AR D +++ R
Sbjct: 150 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----DIYRASYYRK 201
Query: 341 VG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
G +M PE + G+F+ K+D +SFGVLL E S
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 116/232 (50%), Gaps = 25/232 (10%)
Query: 170 NKLGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LG+G FG V Y N GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 225 LFGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G C G + LI EY+P SL +L ++ D + +L +T++
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIK------LLQYTSQ----- 125
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-V 341
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D+ +
Sbjct: 126 -ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 233
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 25/231 (10%)
Query: 171 KLGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRL 225
+LG+G FG V Y N GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 226 FGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
G C G + LI E++P SL +L K+ D + +L +T++
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIK------LLQYTSQ------ 125
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-VG 342
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D+ +
Sbjct: 126 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 233
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 31/219 (14%)
Query: 172 LGEGGFGPVYKGKL------LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVR 224
LG G FG VY+G++ + +VAVK L + E +F E ++I+K +H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G ++ + ++ E M L FL + + + P+S +LD + + I
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-----SQPSSLAMLDL---LHVARDI 150
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARMFGGDELQSNMNRI 340
A G YL + IHRD+ A N LL G + KI DFG+AR D +++ R
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----DIYRASYYRK 202
Query: 341 VG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
G +M PE + G+F+ K+D +SFGVLL E S
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 31/219 (14%)
Query: 172 LGEGGFGPVYKGKL------LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVR 224
LG G FG VY+G++ + +VAVK L + E +F E ++I+K +H+N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G ++ + ++ E M L FL + + + P+S +LD + + I
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-----SQPSSLAMLDL---LHVARDI 166
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARMFGGDELQSNMNRI 340
A G YL + IHRD+ A N LL G + KI DFG+AR D +++ R
Sbjct: 167 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----DIYRASYYRK 218
Query: 341 VG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
G +M PE + G+F+ K+D +SFGVLL E S
Sbjct: 219 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG VYKGK V + ++ + Q ++ FKNE+ ++ K H N++ G
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ + ++ ++ SL L + + F+M+ ++D I AQG+
Sbjct: 101 TKP-QLAIVTQWCEGSSLYHHL--HIIETKFEMIK------LID------IARQTAQGMD 145
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH S +IHRDLK++N+ L D+ KI DFG+A + ++ G+ +M+P
Sbjct: 146 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 202
Query: 350 EYAL---HGLFSIKSDVFSFGVLLLETLSSK 377
E +S +SDV++FG++L E ++ +
Sbjct: 203 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG VYKGK V + ++ + Q ++ FKNE+ ++ K H N++ G
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ + ++ ++ SL L + + F+M+ + I AQG+
Sbjct: 79 TKP-QLAIVTQWCEGSSLYHHL--HIIETKFEMIK------------LIDIARQTAQGMD 123
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH S +IHRDLK++N+ L D+ KI DFG+A + ++ G+ +M+P
Sbjct: 124 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
Query: 350 EYAL---HGLFSIKSDVFSFGVLLLETLSSK 377
E +S +SDV++FG++L E ++ +
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 31/219 (14%)
Query: 172 LGEGGFGPVYKGKL------LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVR 224
LG G FG VY+G++ + +VAVK L + E +F E ++I+K +H+N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G ++ + ++ E M L FL + + + P+S +LD + + I
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-----SQPSSLAMLDL---LHVARDI 176
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARMFGGDELQSNMNRI 340
A G YL + IHRD+ A N LL G + KI DFG+AR D +++ R
Sbjct: 177 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----DIYRASYYRK 228
Query: 341 VG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
G +M PE + G+F+ K+D +SFGVLL E S
Sbjct: 229 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 130/301 (43%), Gaps = 33/301 (10%)
Query: 161 TATHNFSEENKLGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVE-EFKNEMIL 213
A + +LG+G FG VY+G K VA+K ++ + EF NE +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
+ + + ++VRL G + ++I E M L +L + + V P S
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS----- 123
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL 333
+ +++ IA G+ YL+ + +HRDL A N ++ D KI DFG+ R +
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 180
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLL 391
+ + +MSPE G+F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 240
Query: 392 GHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNE 451
L K D +L ++ +C Q N RP+ E++S IK E
Sbjct: 241 MEGGLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEE 284
Query: 452 I 452
+
Sbjct: 285 M 285
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 25/232 (10%)
Query: 170 NKLGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+LG+G FG V Y N GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 225 LFGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G C G + LI EY+P SL +L K+ D + +L +T++
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK------LLQYTSQ----- 122
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD-ELQSNMNRIV 341
I +G+ YL R IHRDL N+L++ + KI DFG+ ++ D E
Sbjct: 123 -ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGE 178
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 230
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG VYKGK V + ++ + Q ++ FKNE+ ++ K H N++ G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ + ++ ++ SL L + + F+M+ + I AQG+
Sbjct: 74 TKP-QLAIVTQWCEGSSLYHHL--HIIETKFEMIK------------LIDIARQTAQGMD 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH S +IHRDLK++N+ L D+ KI DFG+A + ++ G+ +M+P
Sbjct: 119 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
Query: 350 EYAL---HGLFSIKSDVFSFGVLLLETLSSK 377
E +S +SDV++FG++L E ++ +
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 31/219 (14%)
Query: 172 LGEGGFGPVYKGKL------LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVR 224
LG G FG VY+G++ + +VAVK L + E +F E ++I+K +H+N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G ++ + ++ E M L FL + + + P+S +LD + + I
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-----SQPSSLAMLDL---LHVARDI 156
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARMFGGDELQSNMNRI 340
A G YL + IHRD+ A N LL G + KI DFG+AR D +++ R
Sbjct: 157 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----DIYRASYYRK 208
Query: 341 VG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
G +M PE + G+F+ K+D +SFGVLL E S
Sbjct: 209 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 131/295 (44%), Gaps = 42/295 (14%)
Query: 172 LGEGGFGPV--YKGKLLN---GEEVAVKRLSNKSG-QGVEEFKNEMILIAKLHHRNLVRL 225
LGEG FG V Y N GE VAVK L +G Q +K E+ ++ L+H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 226 FGCCIEQGEKIL--IYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
GCC + G L + EY+P SL +L ++S G + + +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLP--RHSIGLAQL--------------LLFAQQ 142
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG-GDELQSNMNRIVG 342
I +G+ YLH IHRDL A NVLLD D KI DFG+A+ G E
Sbjct: 143 ICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDS 199
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDR 402
+ +PE F SDV+SFGV L E L+ +++ L L+G A R
Sbjct: 200 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR 259
Query: 403 AWKLLD-------PTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
+LL+ P +Y ++K C + A+ RPT ++ ++K
Sbjct: 260 LTELLERGERLPRPDKCPAEVYHLMKN-------CWETEASFRPTFENLIPILKT 307
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG VYKGK V + ++ + Q ++ FKNE+ ++ K H N++ G
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ + ++ ++ SL L + + F+M+ + I AQG+
Sbjct: 76 TKP-QLAIVTQWCEGSSLYHHL--HIIETKFEMIK------------LIDIARQTAQGMD 120
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH S +IHRDLK++N+ L D+ KI DFG+A + ++ G+ +M+P
Sbjct: 121 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 177
Query: 350 EYAL---HGLFSIKSDVFSFGVLLLETLSSK 377
E +S +SDV++FG++L E ++ +
Sbjct: 178 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 135/315 (42%), Gaps = 39/315 (12%)
Query: 153 FFSLASI------STATHNFSEENKLGEGGFGPVYKG------KLLNGEEVAVKRLSNKS 200
+FS A + A + +LG+G FG VY+G K VA+K ++ +
Sbjct: 30 YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 89
Query: 201 GQGVE-EFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSG 259
EF NE ++ + + ++VRL G + ++I E M L +L +
Sbjct: 90 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 149
Query: 260 FDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKI 319
+ V P S + +++ IA G+ YL+ + +HRDL A N ++ D KI
Sbjct: 150 NNPVLAPPS-----LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 201
Query: 320 SDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSK 377
DFG+ R + + + +MSPE G+F+ SDV+SFGV+L E TL+ +
Sbjct: 202 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 261
Query: 378 KNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAAD 437
N L + L K D +L ++ +C Q N
Sbjct: 262 PYQGLSNEQVLRFVMEGGLLDKPDNCPDML----------------FELMRMCWQYNPKM 305
Query: 438 RPTMSEVVSMIKNEI 452
RP+ E++S IK E+
Sbjct: 306 RPSFLEIISSIKEEM 320
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG VYKGK V + ++ + Q ++ FKNE+ ++ K H N++ G
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ + ++ ++ SL L + + F+M+ ++D I AQG+
Sbjct: 102 TKP-QLAIVTQWCEGSSLYHHL--HIIETKFEMIK------LID------IARQTAQGMD 146
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH S +IHRDLK++N+ L D+ KI DFG+A + ++ G+ +M+P
Sbjct: 147 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 203
Query: 350 EYAL---HGLFSIKSDVFSFGVLLLETLSSK 377
E +S +SDV++FG++L E ++ +
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 31/219 (14%)
Query: 172 LGEGGFGPVYKGKL------LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVR 224
LG G FG VY+G++ + +VAVK L + E +F E ++I+K +H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G ++ + ++ E M L FL + + + P+S +LD + + I
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-----SQPSSLAMLDL---LHVARDI 141
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARMFGGDELQSNMNRI 340
A G YL + IHRD+ A N LL G + KI DFG+AR D +++ R
Sbjct: 142 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----DIYRASYYRK 193
Query: 341 VG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
G +M PE + G+F+ K+D +SFGVLL E S
Sbjct: 194 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 142/290 (48%), Gaps = 40/290 (13%)
Query: 169 ENKLGEGGFGPVYKGKLLNG---EEVAVKRLSN-KSGQGVEEFKNEMILIAKL-HHRNLV 223
++ +GEG FG V K ++ + A+KR+ S +F E+ ++ KL HH N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPA------SKGILDWTTR 277
L G C +G L EY P+ +L FL + + TDPA + L
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV-----LETDPAFAIANSTASTLSSQQL 141
Query: 278 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE--LQS 335
+ +A+G+ YL S+ + IHR+L A N+L+ + KI+DFG++R G E ++
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKK 195
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAW 395
M R+ +M+ E + +++ SDV+S+GVLL E +S T + + L
Sbjct: 196 TMGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL-GGTPYCGMTCAELYE--- 249
Query: 396 NLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
K + ++L P ++ +Y ++++ C +E +RP+ ++++
Sbjct: 250 ---KLPQGYRLEKPLNCDDEVYDLMRQ-------CWREKPYERPSFAQIL 289
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 130/301 (43%), Gaps = 33/301 (10%)
Query: 161 TATHNFSEENKLGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVE-EFKNEMIL 213
A + +LG+G FG VY+G K VA+K ++ + EF NE +
Sbjct: 13 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 72
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
+ + + ++VRL G + ++I E M L +L + + V P S
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS----- 127
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL 333
+ +++ IA G+ YL+ + +HRDL A N ++ D KI DFG+ R +
Sbjct: 128 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 184
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLL 391
+ + +MSPE G+F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 185 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 244
Query: 392 GHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNE 451
L K D +L ++ +C Q N RP+ E++S IK E
Sbjct: 245 MEGGLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEE 288
Query: 452 I 452
+
Sbjct: 289 M 289
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG VYKGK V + ++ + Q ++ FKNE+ ++ K H N++ G
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ + ++ ++ SL L + + F+M+ + I AQG+
Sbjct: 79 TKP-QLAIVTQWCEGSSLYHHL--HIIETKFEMIK------------LIDIARQTAQGMD 123
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH S +IHRDLK++N+ L D+ KI DFG+A + ++ G+ +M+P
Sbjct: 124 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
Query: 350 EYAL---HGLFSIKSDVFSFGVLLLETLSSK 377
E +S +SDV++FG++L E ++ +
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 31/219 (14%)
Query: 172 LGEGGFGPVYKGKL------LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVR 224
LG G FG VY+G++ + +VAVK L + E +F E ++I+K +H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G ++ + ++ E M L FL + + + P+S +LD + + I
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP-----SQPSSLAMLDL---LHVARDI 164
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARMFGGDELQSNMNRI 340
A G YL + IHRD+ A N LL G + KI DFG+AR D +++ R
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----DIYRASYYRK 216
Query: 341 VG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
G +M PE + G+F+ K+D +SFGVLL E S
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 130/301 (43%), Gaps = 33/301 (10%)
Query: 161 TATHNFSEENKLGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVE-EFKNEMIL 213
A + +LG+G FG VY+G K VA+K ++ + EF NE +
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
+ + + ++VRL G + ++I E M L +L + + V P S
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS----- 130
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL 333
+ +++ IA G+ YL+ + +HRDL A N ++ D KI DFG+ R +
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 187
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLL 391
+ + +MSPE G+F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 188 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 247
Query: 392 GHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNE 451
L K D +L ++ +C Q N RP+ E++S IK E
Sbjct: 248 MEGGLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEE 291
Query: 452 I 452
+
Sbjct: 292 M 292
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 152/308 (49%), Gaps = 50/308 (16%)
Query: 154 FSLASISTATHNFSE-ENKLGEGGFGPVYKGKLLNGEE-VAVKRLSNKSGQG-------V 204
F + + T N E E ++G+GGFG V+KG+L+ + VA+K L +G
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+EF+ E+ +++ L+H N+V+L+G + ++ E++P L L D +
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHP------- 118
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL-----DGDMNPKI 319
+ W+ ++R++ IA G+ Y+ Q ++HRDL++ N+ L + + K+
Sbjct: 119 -------IKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKV 170
Query: 320 SDFGIARMFGGDELQSNMNRIVGTYGYMSPEY--ALHGLFSIKSDVFSFGVLLLETLSSK 377
+DFG+++ + +++ ++G + +M+PE A ++ K+D +SF ++L L+ +
Sbjct: 171 ADFGLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
Query: 378 KNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAAD 437
Y+ + + N+ +++ L PT+ E P ++ I+ LC +
Sbjct: 226 GPFDEYSYGKIKFI----NMIREEG----LRPTIP-EDCPPRLRNVIE---LCWSGDPKK 273
Query: 438 RPTMSEVV 445
RP S +V
Sbjct: 274 RPHFSYIV 281
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 130/301 (43%), Gaps = 33/301 (10%)
Query: 161 TATHNFSEENKLGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVE-EFKNEMIL 213
A + +LG+G FG VY+G K VA+K ++ + EF NE +
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
+ + + ++VRL G + ++I E M L +L + + V P S
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS----- 129
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL 333
+ +++ IA G+ YL+ + +HRDL A N ++ D KI DFG+ R +
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLL 391
+ + +MSPE G+F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 246
Query: 392 GHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNE 451
L K D +L ++ +C Q N RP+ E++S IK E
Sbjct: 247 MEGGLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEE 290
Query: 452 I 452
+
Sbjct: 291 M 291
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 35/302 (11%)
Query: 161 TATHNFSEENKLGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVE--EFKNEMI 212
A + +LG+G FG VY+G K VA+K + N++ E EF NE
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFLNEAS 73
Query: 213 LIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGIL 272
++ + + ++VRL G + ++I E M L +L + + V P S
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS---- 129
Query: 273 DWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE 332
+ +++ IA G+ YL+ + +HRDL A N ++ D KI DFG+ R +
Sbjct: 130 -LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 333 LQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTL 390
+ + +MSPE G+F+ SDV+SFGV+L E TL+ + N L
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 245
Query: 391 LGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
+ L K D +L ++ +C Q N RP+ E++S IK
Sbjct: 246 VMEGGLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKE 289
Query: 451 EI 452
E+
Sbjct: 290 EM 291
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 108/219 (49%), Gaps = 31/219 (14%)
Query: 172 LGEGGFGPVYKGKL------LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVR 224
LG G FG VY+G++ + +VAVK L + E +F E ++I+K +H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G ++ + ++ E M L FL + + + P+S +LD + + I
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-----SQPSSLAMLDL---LHVARDI 190
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARMFGGDELQSNMNRI 340
A G YL + IHRD+ A N LL G + KI DFG+AR D ++ R
Sbjct: 191 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----DIYRAGYYRK 242
Query: 341 VG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
G +M PE + G+F+ K+D +SFGVLL E S
Sbjct: 243 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG VYKGK V + ++ + Q ++ FKNE+ ++ K H N++ G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ ++ ++ SL L + + F+M+ + I AQG+
Sbjct: 74 TAP-QLAIVTQWCEGSSLYHHL--HIIETKFEMIK------------LIDIARQTAQGMD 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH S +IHRDLK++N+ L D+ KI DFG+A + ++ G+ +M+P
Sbjct: 119 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
Query: 350 EYAL---HGLFSIKSDVFSFGVLLLETLSSK 377
E +S +SDV++FG++L E ++ +
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 108/219 (49%), Gaps = 31/219 (14%)
Query: 172 LGEGGFGPVYKGKL------LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVR 224
LG G FG VY+G++ + +VAVK L + E +F E ++I+K +H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G ++ + ++ E M L FL + + + P+S +LD + + I
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-----SQPSSLAMLDL---LHVARDI 167
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARMFGGDELQSNMNRI 340
A G YL + IHRD+ A N LL G + KI DFG+AR D ++ R
Sbjct: 168 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----DIYRAGYYRK 219
Query: 341 VG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
G +M PE + G+F+ K+D +SFGVLL E S
Sbjct: 220 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 109/219 (49%), Gaps = 31/219 (14%)
Query: 172 LGEGGFGPVYKGKL------LNGEEVAVKRLSN-KSGQGVEEFKNEMILIAKLHHRNLVR 224
LG G FG VY+G++ + +VAVK L S Q +F E ++I+K +H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G ++ + ++ E M L FL + + + P+S +LD + + I
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-----SQPSSLAMLDL---LHVARDI 164
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARMFGGDELQSNMNRI 340
A G YL + IHRD+ A N LL G + KI DFG+AR D +++ R
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----DIYRASYYRK 216
Query: 341 VG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
G +M PE + G+F+ K+D +SFGVLL E S
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 130/301 (43%), Gaps = 33/301 (10%)
Query: 161 TATHNFSEENKLGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVE-EFKNEMIL 213
A + +LG+G FG VY+G K VA+K ++ + EF NE +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
+ + + ++VRL G + ++I E M L +L + + V P S
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS----- 123
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL 333
+ +++ IA G+ YL+ + +HRDL A N + D KI DFG+ R +
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY 180
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLL 391
+ + +MSPE G+F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 240
Query: 392 GHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNE 451
L K D +L +++ +C Q N RP+ E++S IK E
Sbjct: 241 MEGGLLDKPDNCPDML----------------LELMRMCWQYNPKMRPSFLEIISSIKEE 284
Query: 452 I 452
+
Sbjct: 285 M 285
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG VYKGK V + ++ + Q ++ FKNE+ ++ K H N++ G
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ + ++ ++ SL L + + F+M+ ++D I AQG+
Sbjct: 94 TKP-QLAIVTQWCEGSSLYHHL--HIIETKFEMIK------LID------IARQTAQGMD 138
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIA----RMFGGDELQSNMNRIVGTYG 345
YLH S +IHRDLK++N+ L D+ KI DFG+A R G + + ++ G+
Sbjct: 139 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSIL 191
Query: 346 YMSPEYAL---HGLFSIKSDVFSFGVLLLETLSSK 377
+M+PE +S +SDV++FG++L E ++ +
Sbjct: 192 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 151/308 (49%), Gaps = 50/308 (16%)
Query: 154 FSLASISTATHNFSE-ENKLGEGGFGPVYKGKLLNGEE-VAVKRLSNKSGQG-------V 204
F + + T N E E ++G+GGFG V+KG+L+ + VA+K L +G
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+EF+ E+ +++ L+H N+V+L+G + ++ E++P L L D +
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHP------- 118
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL-----DGDMNPKI 319
+ W+ ++R++ IA G+ Y+ Q ++HRDL++ N+ L + + K+
Sbjct: 119 -------IKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKV 170
Query: 320 SDFGIARMFGGDELQSNMNRIVGTYGYMSPEY--ALHGLFSIKSDVFSFGVLLLETLSSK 377
+DFG ++ + +++ ++G + +M+PE A ++ K+D +SF ++L L+ +
Sbjct: 171 ADFGTSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
Query: 378 KNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAAD 437
Y+ + + N+ +++ L PT+ E P ++ I+ LC +
Sbjct: 226 GPFDEYSYGKIKFI----NMIREEG----LRPTIP-EDCPPRLRNVIE---LCWSGDPKK 273
Query: 438 RPTMSEVV 445
RP S +V
Sbjct: 274 RPHFSYIV 281
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG VYKGK V + ++ + Q ++ FKNE+ ++ K H N++ G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ + ++ ++ SL L + + F+M+ + I AQG+
Sbjct: 74 TKP-QLAIVTQWCEGSSLYHHL--HIIETKFEMI------------KLIDIARQTAQGMD 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIA----RMFGGDELQSNMNRIVGTYG 345
YLH S +IHRDLK++N+ L D+ KI DFG+A R G + + ++ G+
Sbjct: 119 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSIL 171
Query: 346 YMSPEYAL---HGLFSIKSDVFSFGVLLLETLSSK 377
+M+PE +S +SDV++FG++L E ++ +
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 113/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ L D+ +S + P K L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQD-----LKDFMDASALTGIPLPLIKSYL--------- 109
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 165
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG VYKGK V + ++ + Q ++ FKNE+ ++ K H N++ G
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ + ++ ++ SL L + + F+M+ ++D I AQG+
Sbjct: 102 TKP-QLAIVTQWCEGSSLYHHL--HIIETKFEMIK------LID------IARQTAQGMD 146
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIA----RMFGGDELQSNMNRIVGTYG 345
YLH S +IHRDLK++N+ L D+ KI DFG+A R G + + ++ G+
Sbjct: 147 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSIL 199
Query: 346 YMSPEYAL---HGLFSIKSDVFSFGVLLLETLSSK 377
+M+PE +S +SDV++FG++L E ++ +
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 25/231 (10%)
Query: 171 KLGEGGFGPV----YKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRL 225
+LG+G FG V Y N GE VAVK+L + + + + +F+ E+ ++ L H N+V+
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 226 FGCCIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
G C G + LI EY+P SL +L K+ D + +L +T++
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK------LLQYTSQ------ 123
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI-VG 342
I +G+ YL R IHR+L N+L++ + KI DFG+ ++ D+ +
Sbjct: 124 ICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGES 180
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ +PE FS+ SDV+SFGV+L E + + ++ + + ++G+
Sbjct: 181 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 231
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 109/219 (49%), Gaps = 31/219 (14%)
Query: 172 LGEGGFGPVYKGKL------LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVR 224
LG G FG VY+G++ + +VAVK L + E +F E ++I+K +H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G ++ + ++ E M L FL + + + P+S +LD + + I
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP-----SQPSSLAMLDL---LHVARDI 150
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARMFGGDELQSNMNRI 340
A G YL + IHRD+ A N LL G + KI DFG+A+ D +++ R
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAQ----DIYRASYYRK 202
Query: 341 VG----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
G +M PE + G+F+ K+D +SFGVLL E S
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 137/294 (46%), Gaps = 39/294 (13%)
Query: 169 ENKLGEGGFGPVYKGKL-LNGEE---VAVKRL-SNKSGQGVEEFKNEMILIAKLHHRNLV 223
E +G G FG V G L L G+ VA+K L S + + +F +E ++ + H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L G + ++I E+M N SLD FL + G V ++ G
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQ--------------NDGQFTVIQLVGMLRG 117
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG- 342
IA G+ YL + + +HR L A N+L++ ++ K+SDFG++R D +G
Sbjct: 118 IAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 174
Query: 343 --TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+ +PE + F+ SDV+S+G+++ E +S + ++++ + ++
Sbjct: 175 KIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP-YWDMTNQDVINAI------ 227
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVN 454
++ ++L P AL+ ++ L C Q++ RP ++V+ + I N
Sbjct: 228 EQDYRLPPPMDCPSALH-------QLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 274
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 23/215 (10%)
Query: 166 FSEENKLGEGGFGPVYKGKLLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRNLV 223
+ + K+GEG +G VYK K G VA+KR+ + +G+ E+ L+ +LHH N+V
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + L++E+M V D G+ D ++ + +
Sbjct: 83 SLIDVIHSERCLTLVFEFM--------------EKDLKKVLDENKTGLQDSQIKIYLYQ- 127
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
+ +G+ + HQ+ R++HRDLK N+L++ D K++DFG+AR FG ++S + +V T
Sbjct: 128 LLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV-T 182
Query: 344 YGYMSPEYAL-HGLFSIKSDVFSFGVLLLETLSSK 377
Y +P+ + +S D++S G + E ++ K
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 26/211 (12%)
Query: 172 LGEGGFGPVYKGKLL-NGE----EVAVKRLSNKSG-QGVEEFKNEMILIAKLHHRNLVRL 225
LG G FG V+KG + GE V +K + +KSG Q + + M+ I L H ++VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 226 FGCCIEQGEKI-LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G C G + L+ +Y+P SL + ++ + G + +L+W + I
Sbjct: 99 LGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQL--------LLNWGVQ------I 142
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
A+G+ YL ++ ++HR+L A NVLL +++DFG+A + D+ Q +
Sbjct: 143 AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 345 GYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E G ++ +SDV+S+GV + E ++
Sbjct: 200 KWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 23/215 (10%)
Query: 166 FSEENKLGEGGFGPVYKGKLLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRNLV 223
+ + K+GEG +G VYK K G VA+KR+ + +G+ E+ L+ +LHH N+V
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + L++E+M V D G+ D ++ + +
Sbjct: 83 SLIDVIHSERCLTLVFEFM--------------EKDLKKVLDENKTGLQDSQIKIYLYQ- 127
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
+ +G+ + HQ+ R++HRDLK N+L++ D K++DFG+AR FG ++S + +V T
Sbjct: 128 LLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV-T 182
Query: 344 YGYMSPEYAL-HGLFSIKSDVFSFGVLLLETLSSK 377
Y +P+ + +S D++S G + E ++ K
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 147/313 (46%), Gaps = 56/313 (17%)
Query: 162 ATHNFSEE---------NKLGEGGFGPVYKGKL-LNGEE---VAVKRLS-NKSGQGVEEF 207
A H F++E +G G FG V G+L L G+ VA+K L + + +F
Sbjct: 32 AVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDF 91
Query: 208 KNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPA 267
E ++ + H N+V L G +++ E+M N +LD FL K+ F ++
Sbjct: 92 LCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL--RKHDGQFTVIQ--- 146
Query: 268 SKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARM 327
V ++ GIA G+ YL + + +HRDL A N+L++ ++ K+SDFG++R+
Sbjct: 147 ---------LVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV 194
Query: 328 FGGDELQSNMNRIVGTYG------YMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTR 381
++ + + T G + +PE + F+ SDV+S+G+++ E +S +
Sbjct: 195 -----IEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP- 248
Query: 382 FYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTM 441
++++ + ++ + ++L P L+ ++ L C Q+ A+RP
Sbjct: 249 YWDMSNQDVIKAI------EEGYRLPAPMDCPAGLH-------QLMLDCWQKERAERPKF 295
Query: 442 SEVVSMIKNEIVN 454
++V ++ I N
Sbjct: 296 EQIVGILDKMIRN 308
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 26/211 (12%)
Query: 172 LGEGGFGPVYKGKLL-NGE----EVAVKRLSNKSG-QGVEEFKNEMILIAKLHHRNLVRL 225
LG G FG V+KG + GE V +K + +KSG Q + + M+ I L H ++VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 226 FGCCIEQGEKI-LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
G C G + L+ +Y+P SL + ++ + G + +L+W + I
Sbjct: 81 LGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQL--------LLNWGVQ------I 124
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
A+G+ YL ++ ++HR+L A NVLL +++DFG+A + D+ Q +
Sbjct: 125 AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 345 GYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E G ++ +SDV+S+GV + E ++
Sbjct: 182 KWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 136/283 (48%), Gaps = 40/283 (14%)
Query: 166 FSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLV 223
F++ +++G+G FG VYKG + +EV ++ + ++ +E+ + E+ ++++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
R FG ++ + +I EY+ S D++ G L+ T I+
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGG------------GSALDLL----KPGPLEETYIATILRE 124
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL YLH R IHRD+KA+NVLL + K++DFG+A + Q N VGT
Sbjct: 125 ILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVGT 179
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK-KNTRFYNIDSLTLLGHAWNLWKDDR 402
+M+PE + K+D++S G+ +E + N+ + + L L+
Sbjct: 180 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP---------- 229
Query: 403 AWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
K PTL+ + P K +++ C+ ++ RPT E++
Sbjct: 230 --KNSPPTLEGQHSKPF-KEFVEA---CLNKDPRFRPTAKELL 266
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 141/301 (46%), Gaps = 37/301 (12%)
Query: 172 LGEGGFGPVYKGKL--LNGEE----VAVKRL-SNKSGQGVEEFKNEMILIAKLHHRNLVR 224
LGEG FG V K L G VAVK L N S + + +E ++ +++H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFD-YKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L+G C + G +LI EY SL FL + K G+ + LD + G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 284 --------IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIAR-MFGGDE-L 333
I+QG+ YL + ++++HRDL A N+L+ KISDFG++R ++ D +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ + RI +M+ E +++ +SDV+SFGVLL E +TL G+
Sbjct: 208 KRSQGRI--PVKWMAIESLFDHIYTTQSDVWSFGVLLWEI--------------VTLGGN 251
Query: 394 AWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIV 453
+ +R + LL + E + ++ L C ++ RP +++ ++ +V
Sbjct: 252 PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
Query: 454 N 454
Sbjct: 312 K 312
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG VYKGK V + ++ + Q ++ FKNE+ ++ K H N++ G
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ + ++ ++ SL L + + F+M K ++D I A+G+
Sbjct: 78 TKP-QLAIVTQWCEGSSLYHHL--HASETKFEM------KKLID------IARQTARGMD 122
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH S +IHRDLK++N+ L D KI DFG+A + ++ G+ +M+P
Sbjct: 123 YLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 179
Query: 350 EYAL---HGLFSIKSDVFSFGVLLLETLSSK 377
E +S +SDV++FG++L E ++ +
Sbjct: 180 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 141/301 (46%), Gaps = 37/301 (12%)
Query: 172 LGEGGFGPVYKGKL--LNGEE----VAVKRL-SNKSGQGVEEFKNEMILIAKLHHRNLVR 224
LGEG FG V K L G VAVK L N S + + +E ++ +++H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFD-YKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L+G C + G +LI EY SL FL + K G+ + LD + G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 284 --------IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIAR-MFGGDE-L 333
I+QG+ YL + ++++HRDL A N+L+ KISDFG++R ++ D +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ + RI +M+ E +++ +SDV+SFGVLL E +TL G+
Sbjct: 208 KRSQGRI--PVKWMAIESLFDHIYTTQSDVWSFGVLLWEI--------------VTLGGN 251
Query: 394 AWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIV 453
+ +R + LL + E + ++ L C ++ RP +++ ++ +V
Sbjct: 252 PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
Query: 454 N 454
Sbjct: 312 K 312
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ S+D L + +S + P K L
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL---SMD--LKKFMDASALTGIPLPLIKSYL--------- 110
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 166
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ S+D L + +S + P K L
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL---SMD--LKKFMDASALTGIPLPLIKSYL--------- 112
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 168
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 138/297 (46%), Gaps = 39/297 (13%)
Query: 169 ENKLGEGGFGPVYKGKL-LNGEE---VAVKRLSNK-SGQGVEEFKNEMILIAKLHHRNLV 223
E +G G FG V +G+L G++ VA+K L + + EF +E ++ + H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
RL G +++ E+M N +LD FL + G V ++ G
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLR--------------LNDGQFTVIQLVGMLRG 124
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG- 342
IA G+ YL + S +HRDL A N+L++ ++ K+SDFG++R + +G
Sbjct: 125 IASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGG 181
Query: 343 --TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+ +PE F+ SD +S+G+++ E +S + ++++ + ++
Sbjct: 182 KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP-YWDMSNQDVINAI------ 234
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPS 457
++ ++L P +L+ ++ L C Q++ RP +VVS + I N S
Sbjct: 235 EQDYRLPPPPDCPTSLH-------QLMLDCWQKDRNARPRFPQVVSALDKMIRNPAS 284
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 132/297 (44%), Gaps = 43/297 (14%)
Query: 172 LGEGGFGPVYKGKLLN-GEE-----VAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRNLV 223
LG G FG V + G+E VAVK L S E +E+ +++ L H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII-- 281
L G C G ++I EY L FL + TDPA I + T R +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFL----RRKSRVLETDPAF-AIANSTASTRDLLH 168
Query: 282 --EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+AQG+ +L + IHRD+ A NVLL KI DFG+AR ++ ++ N
Sbjct: 169 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMNDSNY 220
Query: 340 IVG-----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHA 394
IV +M+PE +++++SDV+S+G+LL E S N + +
Sbjct: 221 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILVNSKF 276
Query: 395 WNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNE 451
+ L KD +++ P + +Y +++ C RPT ++ S ++ +
Sbjct: 277 YKLVKD--GYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQ 324
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 140/301 (46%), Gaps = 37/301 (12%)
Query: 172 LGEGGFGPVYKGKL--LNGEE----VAVKRL-SNKSGQGVEEFKNEMILIAKLHHRNLVR 224
LGEG FG V K L G VAVK L N S + + +E ++ +++H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFD-YKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L+G C + G +LI EY SL FL + K G+ + LD + G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 284 --------IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIAR-MFGGDE-L 333
I+QG+ YL + S ++HRDL A N+L+ KISDFG++R ++ D +
Sbjct: 151 DLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGH 393
+ + RI +M+ E +++ +SDV+SFGVLL E +TL G+
Sbjct: 208 KRSQGRI--PVKWMAIESLFDHIYTTQSDVWSFGVLLWEI--------------VTLGGN 251
Query: 394 AWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIV 453
+ +R + LL + E + ++ L C ++ RP +++ ++ +V
Sbjct: 252 PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
Query: 454 N 454
Sbjct: 312 K 312
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPL---PLIKSYL--------- 109
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 165
Query: 342 GTYGYMSPEYAL-HGLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 166 -TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 130/296 (43%), Gaps = 41/296 (13%)
Query: 172 LGEGGFGPVYKGKLLN-GEE-----VAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRNLV 223
LG G FG V + G+E VAVK L S E +E+ +++ L H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPA---SKGILDWTTRVRI 280
L G C G ++I EY L FL + TDPA + L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFL----RRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+AQG+ +L + IHRD+ A NVLL KI DFG+AR ++ ++ N I
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMNDSNYI 221
Query: 341 VG-----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAW 395
V +M+PE +++++SDV+S+G+LL E S N + + +
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILVNSKFY 277
Query: 396 NLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNE 451
L KD +++ P + +Y +++ C RPT ++ S ++ +
Sbjct: 278 KLVKD--GYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQ 324
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 32/219 (14%)
Query: 171 KLGEGGFGPVYKGKLLN--GEEVAVKRLSNKSGQ---GVEEFKNEMIL--IAKLHHRNLV 223
++GEG +G V+K + L G VA+KR+ ++G+ + + +L + H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 224 RLFGCCI-----EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
RLF C + + L++E++ D ++ D V +P G+ T +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV----------DQDLTTYLDKVPEP---GVPTETIKD 124
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+ + + +GL +LH + RV+HRDLK N+L+ K++DFG+AR++ Q +
Sbjct: 125 MMFQ-LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALT 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+V T Y +PE L ++ D++S G + E K
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 151/308 (49%), Gaps = 50/308 (16%)
Query: 154 FSLASISTATHNFSE-ENKLGEGGFGPVYKGKLLNGEE-VAVKRLSNKSGQG-------V 204
F + + T N E E ++G+GGFG V+KG+L+ + VA+K L +G
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+EF+ E+ +++ L+H N+V+L+G + ++ E++P L L D +
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHP------- 118
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL-----DGDMNPKI 319
+ W+ ++R++ IA G+ Y+ Q ++HRDL++ N+ L + + K+
Sbjct: 119 -------IKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKV 170
Query: 320 SDFGIARMFGGDELQSNMNRIVGTYGYMSPEY--ALHGLFSIKSDVFSFGVLLLETLSSK 377
+DF +++ + +++ ++G + +M+PE A ++ K+D +SF ++L L+ +
Sbjct: 171 ADFSLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
Query: 378 KNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAAD 437
Y+ + + N+ +++ L PT+ E P ++ I+ LC +
Sbjct: 226 GPFDEYSYGKIKFI----NMIREEG----LRPTIP-EDCPPRLRNVIE---LCWSGDPKK 273
Query: 438 RPTMSEVV 445
RP S +V
Sbjct: 274 RPHFSYIV 281
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKTFM-DASALTGIPL---PLIKSYL--------- 112
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 168
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 39/305 (12%)
Query: 171 KLGEGGFGPVYKGK---LLNGE---EVAVKRLSNKSGQGVE--EFKNEMILIAKLHHRNL 222
+LG+G FG VY+G ++ GE VAVK + N+S E EF NE ++ ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VRL G + +++ E M + L +L + + + P + +++
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT-----LQEMIQMAA 137
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG 342
IA G+ YL+ + +HRDL A N ++ D KI DFG+ R + + +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL 194
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+M+PE G+F+ SD++SFGV+L E +L+ + N L + L +
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 254
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQ 460
D +R + +C Q N RPT E+V+++K+++ P
Sbjct: 255 DNC----------------PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL----HPSF 294
Query: 461 PAFSY 465
P S+
Sbjct: 295 PEVSF 299
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 39/305 (12%)
Query: 171 KLGEGGFGPVYKGK---LLNGE---EVAVKRLSNKSGQGVE--EFKNEMILIAKLHHRNL 222
+LG+G FG VY+G ++ GE VAVK + N+S E EF NE ++ ++
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNEASVMKGFTCHHV 79
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VRL G + +++ E M + L +L + + + P + +++
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT-----LQEMIQMAA 134
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG 342
IA G+ YL+ + +HRDL A N ++ D KI DFG+ R + + +
Sbjct: 135 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL 191
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+M+PE G+F+ SD++SFGV+L E +L+ + N L + L +
Sbjct: 192 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 251
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQ 460
D +R + +C Q N RPT E+V+++K+++ P
Sbjct: 252 DNC----------------PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL----HPSF 291
Query: 461 PAFSY 465
P S+
Sbjct: 292 PEVSF 296
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 32/219 (14%)
Query: 171 KLGEGGFGPVYKGKLLN--GEEVAVKRLSNKSGQ---GVEEFKNEMIL--IAKLHHRNLV 223
++GEG +G V+K + L G VA+KR+ ++G+ + + +L + H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 224 RLFGCCI-----EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
RLF C + + L++E++ D ++ D V +P G+ T +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV----------DQDLTTYLDKVPEP---GVPTETIKD 124
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+ + + +GL +LH + RV+HRDLK N+L+ K++DFG+AR++ Q +
Sbjct: 125 MMFQ-LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALT 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+V T Y +PE L ++ D++S G + E K
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 32/219 (14%)
Query: 171 KLGEGGFGPVYKGKLLN--GEEVAVKRLSNKSGQ---GVEEFKNEMIL--IAKLHHRNLV 223
++GEG +G V+K + L G VA+KR+ ++G+ + + +L + H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 224 RLFGCCI-----EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
RLF C + + L++E++ D ++ D V +P G+ T +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV----------DQDLTTYLDKVPEP---GVPTETIKD 124
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+ + + +GL +LH + RV+HRDLK N+L+ K++DFG+AR++ Q +
Sbjct: 125 MMFQ-LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALT 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+V T Y +PE L ++ D++S G + E K
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ +S + P K L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM----DASALTGIPLPLIKSYL--------- 108
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 164
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPL---PLIKSYL--------- 116
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 117 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 172
Query: 342 GTYGYMSPEYAL-HGLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 173 -TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPL---PLIKSYL--------- 108
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 164
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPL---PLIKSYL--------- 109
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 165
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPL---PLIKSYL--------- 108
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 164
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPL---PLIKSYL--------- 110
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 166
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ +S + P K L
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM----DASALTGIPLPLIKSYL--------- 113
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 114 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 169
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 170 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ +S + P K L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM----DASALTGIPLPLIKSYL--------- 108
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 164
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPL---PLIKSYL--------- 109
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 165
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ +S + P K L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM----DASALTGIPLPLIKSYL--------- 109
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 165
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 63 IVKLLDVIHTENKLYLVFEHV-HQDLKTFM-DASALTGIPL---PLIKSYL--------- 108
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 164
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ +S + P K L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM----DASALTGIPLPLIKSYL--------- 109
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 165
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ +S + P K L
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM----DASALTGIPLPLIKSYL--------- 112
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 168
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ +S + P K L
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM----DASALTGIPLPLIKSYL--------- 111
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 112 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 167
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPL---PLIKSYL--------- 109
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 165
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPL---PLIKSYL--------- 109
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 165
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ +S + P K L
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM----DASALTGIPLPLIKSYL--------- 111
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 112 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 167
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 139/297 (46%), Gaps = 39/297 (13%)
Query: 169 ENKLGEGGFGPVYKGKL-LNGEE---VAVKRLSNK-SGQGVEEFKNEMILIAKLHHRNLV 223
E +G G FG V +G+L G++ VA+K L + + EF +E ++ + H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
RL G +++ E+M N +LD FL + G V ++ G
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLR--------------LNDGQFTVIQLVGMLRG 126
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG- 342
IA G+ YL + S +HRDL A N+L++ ++ K+SDFG++R + +G
Sbjct: 127 IASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGG 183
Query: 343 --TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+ +PE F+ SD +S+G+++ E +S + ++++ + ++ N +
Sbjct: 184 KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP-YWDMSNQDVI----NAIEQ 238
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPS 457
D ++L P +L+ ++ L C Q++ RP +VVS + I N S
Sbjct: 239 D--YRLPPPPDCPTSLH-------QLMLDCWQKDRNARPRFPQVVSALDKMIRNPAS 286
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPL---PLIKSYL--------- 116
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 117 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 172
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 173 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ +S + P K L
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM----DASALTGIPLPLIKSYL--------- 111
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 112 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 167
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ +S + P K L
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM----DASALTGIPLPLIKSYL--------- 110
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 166
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ +S + P K L
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM----DASALTGIPLPLIKSYL--------- 110
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 166
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPL---PLIKSYL--------- 112
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 168
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 39/305 (12%)
Query: 171 KLGEGGFGPVYKGK---LLNGE---EVAVKRLSNKSGQGVE--EFKNEMILIAKLHHRNL 222
+LG+G FG VY+G ++ GE VAVK + N+S E EF NE ++ ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VRL G + +++ E M + L +L + + + P + +++
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT-----LQEMIQMAA 137
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG 342
IA G+ YL+ + +HRDL A N ++ D KI DFG+ R + + +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL 194
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+M+PE G+F+ SD++SFGV+L E +L+ + N L + L +
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 254
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQ 460
D +R + +C Q N RPT E+V+++K+++ P
Sbjct: 255 DNC----------------PERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL----HPSF 294
Query: 461 PAFSY 465
P S+
Sbjct: 295 PEVSF 299
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 108/229 (47%), Gaps = 29/229 (12%)
Query: 154 FSLASISTATHNFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSN---KSGQGVEEFKN 209
F S + + + + LG+G FG V K + G+E AVK +S K E
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 210 EMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASK 269
E+ L+ +L H N+ +L YE+ +K F+L Y+ G ++ + S+
Sbjct: 76 EVQLLKQLDHPNIXKL-------------YEFFEDKGY-FYLVGEVYTGG-ELFDEIISR 120
Query: 270 GILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDG---DMNPKISDFGIAR 326
RII + G+ Y H + +++HRDLK N+LL+ D N +I DFG++
Sbjct: 121 KRFSEVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177
Query: 327 MFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
F E +GT Y++PE LHG + K DV+S GV+L LS
Sbjct: 178 HF---EASKKXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 222
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ +S + P K L
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM----DASALTGIPLPLIKSYL--------- 110
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 166
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ +S + P K L
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM----DASALTGIPLPLIKSYL--------- 113
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 114 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 169
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 170 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K +VAVK L S+ + + + + +EM ++ + H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFL-------FDYKYSSGFDMVTDPASKGILDW 274
++ L G C + G +I EY +L +L +Y Y+ + +SK ++
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 275 TTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQ 334
+V A+G+ YL + + IHRDL A NVL+ D KI+DFG+AR +
Sbjct: 145 AYQV------ARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 195
Query: 335 SNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVLL E +
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG VYKGK V + ++ + Q ++ FKNE+ ++ K H N++ G
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ + ++ ++ SL L + + F+M K ++D I A+G+
Sbjct: 90 TKP-QLAIVTQWCEGSSLYHHL--HASETKFEM------KKLID------IARQTARGMD 134
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIA----RMFGGDELQSNMNRIVGTYG 345
YLH S +IHRDLK++N+ L D KI DFG+A R G + + ++ G+
Sbjct: 135 YLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE----QLSGSIL 187
Query: 346 YMSPEYAL---HGLFSIKSDVFSFGVLLLETLSSK 377
+M+PE +S +SDV++FG++L E ++ +
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 24/210 (11%)
Query: 172 LGEGGFGPVYKGKLL-NGE----EVAVKRL-SNKSGQGVEEFKNEMILIAKLHHRNLVRL 225
LG G FG VYKG + +GE VA+K L N S + +E +E ++A + + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C+ + L+ + MP L + + + G S+ +L+W + IA
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLG--------SQDLLNWCMQ------IA 129
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
+G+ YL +R++HRDL A NVL+ + KI+DFG+AR+ DE + + +
Sbjct: 130 KGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIK 186
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+ E L F+ +SDV+S+GV + E ++
Sbjct: 187 WMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K +VAVK L S+ + + + + +EM ++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFL-------FDYKYSSGFDMVTDPASKGILDW 274
++ L G C + G +I EY +L +L +Y Y+ + +SK ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 275 TTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQ 334
+V A+G+ YL + + IHRDL A NVL+ D KI+DFG+AR +
Sbjct: 156 AYQV------ARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 335 SNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVLL E +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K +VAVK L S+ + + + + +EM ++ + H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFL-------FDYKYSSGFDMVTDPASKGILDW 274
++ L G C + G +I EY +L +L +Y Y+ + +SK ++
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 275 TTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQ 334
+V A+G+ YL + + IHRDL A NVL+ D KI+DFG+AR +
Sbjct: 149 AYQV------ARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 199
Query: 335 SNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVLL E +
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPL---PLIKSYL--------- 109
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 110 FQLLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 165
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K +VAVK L S+ + + + + +EM ++ + H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFL-------FDYKYSSGFDMVTDPASKGILDW 274
++ L G C + G +I EY +L +L +Y Y+ + +SK ++
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 275 TTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQ 334
+V A+G+ YL + + IHRDL A NVL+ D KI+DFG+AR +
Sbjct: 148 AYQV------ARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 198
Query: 335 SNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVLL E +
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K +VAVK L S+ + + + + +EM ++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFL-------FDYKYSSGFDMVTDPASKGILDW 274
++ L G C + G +I EY +L +L +Y Y+ + +SK ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 275 TTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQ 334
+V A+G+ YL + + IHRDL A NVL+ D KI+DFG+AR +
Sbjct: 156 AYQV------ARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 335 SNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVLL E +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 113/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+K++ + +GV E+ L+ +L+H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ D L + +S + P K L
Sbjct: 67 IVKLLDVIHTENKLYLVFEHV-----DQDLKKFMDASALTGIPLPLIKSYL--------- 112
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 168
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG VYKGK V + ++ + Q ++ FKNE+ ++ K H N++ G
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ ++ ++ SL L + + F+M K ++D I A+G+
Sbjct: 90 TAP-QLAIVTQWCEGSSLYHHL--HASETKFEM------KKLID------IARQTARGMD 134
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIA----RMFGGDELQSNMNRIVGTYG 345
YLH S +IHRDLK++N+ L D KI DFG+A R G + + ++ G+
Sbjct: 135 YLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE----QLSGSIL 187
Query: 346 YMSPEYAL---HGLFSIKSDVFSFGVLLLETLSSK 377
+M+PE +S +SDV++FG++L E ++ +
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 39/305 (12%)
Query: 171 KLGEGGFGPVYKGK---LLNGE---EVAVKRLSNKSGQGVE--EFKNEMILIAKLHHRNL 222
+LG+G FG VY+G ++ GE VAVK + N+S E EF NE ++ ++
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNEASVMKGFTCHHV 81
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VRL G + +++ E M + L +L + + + P + +++
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT-----LQEMIQMAA 136
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG 342
IA G+ YL+ + +HRDL A N ++ D KI DFG+ R + + +
Sbjct: 137 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL 193
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+M+PE G+F+ SD++SFGV+L E +L+ + N L + L +
Sbjct: 194 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 253
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQ 460
D +R + +C Q N RPT E+V+++K+++ P
Sbjct: 254 DNC----------------PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL----HPSF 293
Query: 461 PAFSY 465
P S+
Sbjct: 294 PEVSF 298
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 34/290 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSN---KSGQGVEEFKNEMILIAKLHHR 220
NF E K+G G F VY+ LL+G VA+K++ + + E+ L+ +L+H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 221 NLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
N+++ + IE E ++ E L + +K K ++ T +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFK-----------KQKRLIPERTVWKY 141
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+ L ++H SR RV+HRD+K +NV + K+ D G+ R F + + +
Sbjct: 142 FVQLCSALEHMH--SR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK--TTAAHSL 196
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
VGT YMSPE ++ KSD++S G LL E + + + FY G NL+
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFY--------GDKMNLYSL 246
Query: 401 DRAWKLLD-PTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIK 449
+ + D P L ++ +++ + +C+ + RP ++ V + K
Sbjct: 247 CKKIEQCDYPPLPSDHYSEELRQLVN---MCINPDPEKRPDVTYVYDVAK 293
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 16/216 (7%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K +VAVK L S+ + + + + +EM ++ + H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTR--VR 279
++ L G C + G +I EY +L +L + G + +P+ +++ V
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYCYNPSHNPEEQLSSKDLVS 139
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ YL + + IHRDL A NVL+ D KI+DFG+AR +
Sbjct: 140 CAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVLL E +
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 41/298 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE----EVAVK--RLSNKSGQGVEEFKNEMILIAKLHHRNLVRL 225
LGEG FG V +G L + +VAVK +L N S + +EEF +E + H N++RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 226 FGCCIE---QG--EKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
G CIE QG + ++I +M L +L + +G + T ++
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP---------LQTLLKF 152
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIA-RMFGGDELQSNMNR 339
+ IA G+ YL S +HRDL A N +L DM ++DFG++ +++ GD + R
Sbjct: 153 MVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQ--GR 207
Query: 340 IVG-TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLW 398
I +++ E +++ KSDV++FGV + E ++++ T + + + + + +
Sbjct: 208 IAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWE-IATRGMTPYPGVQNHEMYDYLLH-- 264
Query: 399 KDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLP 456
+L P + LY ++ C + + DRPT S + ++ + +LP
Sbjct: 265 ----GHRLKQPEDCLDELY-------EIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 39/305 (12%)
Query: 171 KLGEGGFGPVYKGK---LLNGE---EVAVKRLSNKSGQGVE--EFKNEMILIAKLHHRNL 222
+LG+G FG VY+G ++ GE VAVK + N+S E EF NE ++ ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VRL G + +++ E M + L +L + + + P + +++
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT-----LQEMIQMAA 137
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG 342
IA G+ YL+ + +HRDL A N ++ D KI DFG+ R + + +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL 194
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+M+PE G+F+ SD++SFGV+L E +L+ + N L + L +
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 254
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQ 460
D +R + +C Q N RPT E+V+++K+++ P
Sbjct: 255 DNC----------------PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL----HPSF 294
Query: 461 PAFSY 465
P S+
Sbjct: 295 PEVSF 299
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 16/216 (7%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K +VAVK L S+ + + + + +EM ++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTR--VR 279
++ L G C + G +I EY +L +L + G + +P+ +++ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ YL + + IHRDL A NVL+ D KI+DFG+AR +
Sbjct: 155 CAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVLL E +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K +VAVK L S+ + + + + +EM ++ + H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFL-------FDYKYSSGFDMVTDPASKGILDW 274
++ L G C + G +I EY +L +L +Y Y+ + +SK ++
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 275 TTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQ 334
+V A+G+ YL + + IHRDL A NVL+ D KI+DFG+AR +
Sbjct: 197 AYQV------ARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 247
Query: 335 SNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVLL E +
Sbjct: 248 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 22/221 (9%)
Query: 155 SLASISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKNEMIL 213
S+ S+ ++ K+G+G G VY + G+EVA+++++ + E NE+++
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
+ + + N+V + E ++ EY+ SL TD ++ +D
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL----------------TDVVTETCMD 114
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL 333
+ Q L +LH +VIHRD+K+ N+LL D + K++DFG +
Sbjct: 115 EGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-- 169
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
QS + +VGT +M+PE + K D++S G++ +E +
Sbjct: 170 QSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 16/216 (7%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K +VAVK L S+ + + + + +EM ++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTR--VR 279
++ L G C + G +I EY +L +L + G + +P+ +++ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYCYNPSHNPEEQLSSKDLVS 154
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ YL + + IHRDL A NVL+ D KI+DFG+AR +
Sbjct: 155 CAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVLL E +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 170 NKLGEGGFGPVY--KGKLLNGEEVAVKRL---SNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+KLG GG VY + +LN + VA+K + + + ++ F+ E+ ++L H+N+V
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
+ E L+ EY+ +L ++ S G L T + I
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYI---------------ESHGPLSVDTAINFTNQI 120
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
G+ + H +R++HRD+K N+L+D + KI DFGIA+ L + N ++GT
Sbjct: 121 LDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL-TQTNHVLGTV 176
Query: 345 GYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
Y SPE A +D++S G++L E L
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEML 206
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 22/221 (9%)
Query: 155 SLASISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKNEMIL 213
S+ S+ ++ K+G+G G VY + G+EVA+++++ + E NE+++
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
+ + + N+V + E ++ EY+ SL TD ++ +D
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL----------------TDVVTETCMD 114
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL 333
+ Q L +LH +VIHRD+K+ N+LL D + K++DFG +
Sbjct: 115 EGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-- 169
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
QS + +VGT +M+PE + K D++S G++ +E +
Sbjct: 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+ ++ + +GV E+ L+ +L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPL---PLIKSYL--------- 109
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 165
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRN 221
NF + K+GEG +G VYK + L GE VA+ ++ + +GV E+ L+ +L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+L + + L++E++ ++ L F+ D +G + P K L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPL---PLIKSYL--------- 108
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ QGL + H + RV+HRDLK N+L++ + K++DFG+AR FG +++ + +V
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV 164
Query: 342 GTYGYMSPEYALH-GLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE L +S D++S G + E ++ +
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 22/221 (9%)
Query: 155 SLASISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKNEMIL 213
S+ S+ ++ K+G+G G VY + G+EVA+++++ + E NE+++
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
+ + + N+V + E ++ EY+ SL TD ++ +D
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL----------------TDVVTETCMD 114
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL 333
+ Q L +LH +VIHRD+K+ N+LL D + K++DFG +
Sbjct: 115 EGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-- 169
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
QS + +VGT +M+PE + K D++S G++ +E +
Sbjct: 170 QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 22/221 (9%)
Query: 155 SLASISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKNEMIL 213
S+ S+ ++ K+G+G G VY + G+EVA+++++ + E NE+++
Sbjct: 12 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 71
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
+ + + N+V + E ++ EY+ SL TD ++ +D
Sbjct: 72 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL----------------TDVVTETCMD 115
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL 333
+ Q L +LH +VIHRD+K+ N+LL D + K++DFG +
Sbjct: 116 EGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-- 170
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
QS + +VGT +M+PE + K D++S G++ +E +
Sbjct: 171 QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 211
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 135/305 (44%), Gaps = 39/305 (12%)
Query: 171 KLGEGGFGPVYKGK---LLNGE---EVAVKRLSNKSGQGVE--EFKNEMILIAKLHHRNL 222
+LG+G FG VY+G ++ GE VAVK + N+S E EF NE ++ ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VRL G + +++ E M + L +L + + + P + +++
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT-----LQEMIQMAA 137
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG 342
IA G+ YL+ + +HRDL A N ++ D KI DFG+ R + +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLL 194
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+M+PE G+F+ SD++SFGV+L E +L+ + N L + L +
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 254
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQ 460
D +R + +C Q N RPT E+V+++K+++ P
Sbjct: 255 DNC----------------PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL----HPSF 294
Query: 461 PAFSY 465
P S+
Sbjct: 295 PEVSF 299
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 130/293 (44%), Gaps = 39/293 (13%)
Query: 172 LGEGGFGPVYKGKLLN-GEE-----VAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRNLV 223
LG G FG V + G+E VAVK L S E +E+ +++ L H N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L G C G ++I EY L FL + + D+ D L+ +
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFL---RRKAEADL--DKEDGRPLELRDLLHFSSQ 160
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG- 342
+AQG+ +L + IHRD+ A NVLL KI DFG+AR ++ ++ N IV
Sbjct: 161 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMNDSNYIVKG 212
Query: 343 ----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLW 398
+M+PE +++++SDV+S+G+LL E S N + + + L
Sbjct: 213 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILVNSKFYKLV 268
Query: 399 KDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNE 451
KD +++ P + +Y +++ C RPT ++ S ++ +
Sbjct: 269 KD--GYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQ 312
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 44/287 (15%)
Query: 172 LGEGGFGPVYKGKLLN--GEEVAVKRLSNKSGQGV---EEFKNEMILIAKLHHRNLVRLF 226
LGEG FG VY+G N GE++ V + K + E+F +E +++ L H ++V+L
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G IE+ +I E P L +L +K L T V I +
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYL--------------ERNKNSLKVLTLVLYSLQICK 120
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF-GGDELQSNMNRIVGTYG 345
+ YL + +HRD+ N+L+ K+ DFG++R D ++++ R+
Sbjct: 121 AMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIK 175
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFY--NIDSLTLLGHAWNLWKDDRA 403
+MSPE F+ SDV+ F V + E LS K F+ N D + +L K DR
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE------KGDR- 228
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
L P L LY ++ R C + +DRP +E+V + +
Sbjct: 229 --LPKPDLCPPVLYTLMTR-------CWDYDPSDRPRFTELVCSLSD 266
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 44/287 (15%)
Query: 172 LGEGGFGPVYKGKLLN--GEEVAVKRLSNKSGQGV---EEFKNEMILIAKLHHRNLVRLF 226
LGEG FG VY+G N GE++ V + K + E+F +E +++ L H ++V+L
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G IE+ +I E P L +L +K L T V I +
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYL--------------ERNKNSLKVLTLVLYSLQICK 124
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF-GGDELQSNMNRIVGTYG 345
+ YL + +HRD+ N+L+ K+ DFG++R D ++++ R+
Sbjct: 125 AMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIK 179
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFY--NIDSLTLLGHAWNLWKDDRA 403
+MSPE F+ SDV+ F V + E LS K F+ N D + +L K DR
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE------KGDR- 232
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
L P L LY ++ R C + +DRP +E+V + +
Sbjct: 233 --LPKPDLCPPVLYTLMTR-------CWDYDPSDRPRFTELVCSLSD 270
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKL-HHRNLVRLFGCCI 230
+G G +G VYKG+ + ++A ++ + +G EE K E+ ++ K HHRN+ +G I
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTD--PASKG-ILDWTTRVRIIEGIAQG 287
++ +D L+ G VTD +KG L I I +G
Sbjct: 92 KKNP----------PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
L +LHQ+ +VIHRD+K NVLL + K+ DFG++ D N +GT +M
Sbjct: 142 LSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGTPYWM 196
Query: 348 SPEYAL-----HGLFSIKSDVFSFGVLLLE 372
+PE + KSD++S G+ +E
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIE 226
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 130/293 (44%), Gaps = 39/293 (13%)
Query: 172 LGEGGFGPVYKGKLLN-GEE-----VAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRNLV 223
LG G FG V + G+E VAVK L S E +E+ +++ L H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L G C G ++I EY L FL + + D+ D L+ +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFL---RRKAEADL--DKEDGRPLELRDLLHFSSQ 168
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG- 342
+AQG+ +L + IHRD+ A NVLL KI DFG+AR ++ ++ N IV
Sbjct: 169 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMNDSNYIVKG 220
Query: 343 ----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLW 398
+M+PE +++++SDV+S+G+LL E S N + + + L
Sbjct: 221 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILVNSKFYKLV 276
Query: 399 KDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNE 451
KD +++ P + +Y +++ C RPT ++ S ++ +
Sbjct: 277 KD--GYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQ 320
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 29/210 (13%)
Query: 171 KLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
+LG+G FG VYK K G A K + KS + +E++ E+ ++A H +V+L G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
G+ ++ E+ P ++D + + +G+ + +V + + + L
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLEL-------------DRGLTEPQIQV-VCRQMLEALN 123
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR--IVGTYGYM 347
+LH R+IHRDLKA NVL+ + + +++DFG++ L++ R +GT +M
Sbjct: 124 FLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWM 176
Query: 348 SPEYAL-----HGLFSIKSDVFSFGVLLLE 372
+PE + + K+D++S G+ L+E
Sbjct: 177 APEVVMCETMKDTPYDYKADIWSLGITLIE 206
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 25/205 (12%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIE 231
+G+G FG V G G +VAVK + N + + F E ++ +L H NLV+L G +E
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 232 Q-GEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
+ G ++ EYM SL DY S G + +L ++ + + + Y
Sbjct: 77 EKGGLYIVTEYMAKGSL----VDYLRSRG---------RSVLGGDCLLKFSLDVCEAMEY 123
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
L + +HRDL A NVL+ D K+SDFG+ + E S + + +PE
Sbjct: 124 LEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPE 175
Query: 351 YALHGLFSIKSDVFSFGVLLLETLS 375
FS KSDV+SFG+LL E S
Sbjct: 176 ALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 37/217 (17%)
Query: 170 NKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G G FG VYKGK V + ++ + + + + F+NE+ ++ K H N++ G
Sbjct: 42 TRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 230 IEQGEKIL--------IYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+ I+ +Y+++ + F +F + I
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL-----------------------IDIA 138
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
AQG+ YLH + +IHRD+K++N+ L + KI DFG+A + + +
Sbjct: 139 RQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT 195
Query: 342 GTYGYMSPEYAL---HGLFSIKSDVFSFGVLLLETLS 375
G+ +M+PE + FS +SDV+S+G++L E ++
Sbjct: 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 44/287 (15%)
Query: 172 LGEGGFGPVYKGKLLN--GEEVAVKRLSNKSGQGV---EEFKNEMILIAKLHHRNLVRLF 226
LGEG FG VY+G N GE++ V + K + E+F +E +++ L H ++V+L
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G IE+ +I E P L +L +K L T V I +
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYL--------------ERNKNSLKVLTLVLYSLQICK 136
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF-GGDELQSNMNRIVGTYG 345
+ YL + +HRD+ N+L+ K+ DFG++R D ++++ R+
Sbjct: 137 AMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIK 191
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFY--NIDSLTLLGHAWNLWKDDRA 403
+MSPE F+ SDV+ F V + E LS K F+ N D + +L K DR
Sbjct: 192 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE------KGDR- 244
Query: 404 WKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
L P L LY ++ R C + +DRP +E+V + +
Sbjct: 245 --LPKPDLCPPVLYTLMTR-------CWDYDPSDRPRFTELVCSLSD 282
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 29/210 (13%)
Query: 171 KLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
+LG+G FG VYK K G A K + KS + +E++ E+ ++A H +V+L G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
G+ ++ E+ P ++D + + +G+ + +V + + + L
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLEL-------------DRGLTEPQIQV-VCRQMLEALN 131
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR--IVGTYGYM 347
+LH R+IHRDLKA NVL+ + + +++DFG++ L++ R +GT +M
Sbjct: 132 FLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWM 184
Query: 348 SPEYAL-----HGLFSIKSDVFSFGVLLLE 372
+PE + + K+D++S G+ L+E
Sbjct: 185 APEVVMCETMKDTPYDYKADIWSLGITLIE 214
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 137/302 (45%), Gaps = 61/302 (20%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQG--VEEFKNEMILIAKLHHRNLVRLFGC 228
LG+G FG V K K + +E AVK ++ S + E+ L+ KL H N+++LF
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF-- 87
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
E + + S F++ Y+ G ++ + + RII+ + G+
Sbjct: 88 -----------EILEDSS-SFYIVGELYTGG-ELFDEIIKRKRFSEHDAARIIKQVFSGI 134
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDG---DMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
Y+H+++ ++HRDLK N+LL+ D + KI DFG++ F + + M +GT
Sbjct: 135 TYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAY 188
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHA----------- 394
Y++PE L G + K DV+S GV+L LS FY + +L
Sbjct: 189 YIAPE-VLRGTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDILKRVETGKYAFDLPQ 245
Query: 395 WNLWKDD-----RAWKLLDPTLQNEAL----YPMVKRYIKVALLCVQENAADRPTMSEVV 445
W DD R P+L+ A +P +++Y +++ PT+S++
Sbjct: 246 WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY-----------SSETPTISDLP 294
Query: 446 SM 447
S+
Sbjct: 295 SL 296
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 136/305 (44%), Gaps = 39/305 (12%)
Query: 171 KLGEGGFGPVYKGK---LLNGE---EVAVKRLSNKSGQGVE--EFKNEMILIAKLHHRNL 222
+LG+G FG VY+G ++ GE VAVK + N+S E EF NE ++ ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VRL G + +++ E M + L +L + + + P + +++
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT-----LQEMIQMAA 137
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG 342
IA G+ YL+ + +HR+L A N ++ D KI DFG+ R + + +
Sbjct: 138 EIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL 194
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+M+PE G+F+ SD++SFGV+L E +L+ + N L + L +
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 254
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQ 460
D +R + +C Q N RPT E+V+++K+++ P
Sbjct: 255 DNC----------------PERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL----HPSF 294
Query: 461 PAFSY 465
P S+
Sbjct: 295 PEVSF 299
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 136/305 (44%), Gaps = 39/305 (12%)
Query: 171 KLGEGGFGPVYKGK---LLNGE---EVAVKRLSNKSGQGVE--EFKNEMILIAKLHHRNL 222
+LG+G FG VY+G ++ GE VAVK + N+S E EF NE ++ ++
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNEASVMKGFTCHHV 83
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VRL G + +++ E M + L +L + + + P + +++
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT-----LQEMIQMAA 138
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG 342
IA G+ YL+ + +HR+L A N ++ D KI DFG+ R + + +
Sbjct: 139 EIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLE--TLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+M+PE G+F+ SD++SFGV+L E +L+ + N L + L +
Sbjct: 196 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 255
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEIVNLPSPQQ 460
D +R + +C Q N RPT E+V+++K+++ P
Sbjct: 256 DNC----------------PERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL----HPSF 295
Query: 461 PAFSY 465
P S+
Sbjct: 296 PEVSF 300
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 170 NKLGEGGFGPVYKGKL-LNGEEVAVKRLSN---KSGQGVEEFKNEMILIAKLHHRNLVRL 225
+ LG G FG V GK L G +VAVK L+ +S V + + E+ + H ++++L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
+ + ++ EY+ L FDY G LD R+ + I
Sbjct: 82 YQVISTPSDIFMVMEYVSGGEL----FDYI-----------CKNGRLDEKESRRLFQQIL 126
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
G+ Y H++ V+HRDLK NVLLD MN KI+DFG++ M E + G+
Sbjct: 127 SGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRXSCGSPN 180
Query: 346 YMSPEYALHGLFS-IKSDVFSFGVLLLETL 374
Y +PE L++ + D++S GV+L L
Sbjct: 181 YAAPEVISGRLYAGPEVDIWSSGVILYALL 210
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 25/205 (12%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIE 231
+G+G FG V G G +VAVK + N + + F E ++ +L H NLV+L G +E
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 232 Q-GEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
+ G ++ EYM SL DY S G + +L ++ + + + Y
Sbjct: 86 EKGGLYIVTEYMAKGSL----VDYLRSRG---------RSVLGGDCLLKFSLDVCEAMEY 132
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
L + +HRDL A NVL+ D K+SDFG+ + E S + + +PE
Sbjct: 133 LEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPE 184
Query: 351 YALHGLFSIKSDVFSFGVLLLETLS 375
FS KSDV+SFG+LL E S
Sbjct: 185 ALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 28/210 (13%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQG--VEEFKNEMILIAKLHHRNLVRLFGC 228
LG+G FG V K K + +E AVK ++ S + E+ L+ KL H N+++LF
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF-- 87
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
E + + S F++ Y+ G ++ + + RII+ + G+
Sbjct: 88 -----------EILEDSS-SFYIVGELYTGG-ELFDEIIKRKRFSEHDAARIIKQVFSGI 134
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDG---DMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
Y+H+++ ++HRDLK N+LL+ D + KI DFG++ F + + M +GT
Sbjct: 135 TYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAY 188
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
Y++PE L G + K DV+S GV+L LS
Sbjct: 189 YIAPE-VLRGTYDEKCDVWSAGVILYILLS 217
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 28/210 (13%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQG--VEEFKNEMILIAKLHHRNLVRLFGC 228
LG+G FG V K K + +E AVK ++ S + E+ L+ KL H N+++LF
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF-- 87
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
E + + S F++ Y+ G ++ + + RII+ + G+
Sbjct: 88 -----------EILEDSS-SFYIVGELYTGG-ELFDEIIKRKRFSEHDAARIIKQVFSGI 134
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDG---DMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
Y+H+++ ++HRDLK N+LL+ D + KI DFG++ F + + M +GT
Sbjct: 135 TYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAY 188
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
Y++PE L G + K DV+S GV+L LS
Sbjct: 189 YIAPE-VLRGTYDEKCDVWSAGVILYILLS 217
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 18/217 (8%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K VAVK L + + + + + +EM ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS---GFDMVTDPASKGILDWTTRV 278
++ L G C + G +I EY +L +L + +D+ P + + + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ--MTFKDLV 160
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+A+G+ YL + + IHRDL A NVL+ + KI+DFG+AR + N
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVL+ E +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 25/205 (12%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIE 231
+G+G FG V G G +VAVK + N + + F E ++ +L H NLV+L G +E
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 232 Q-GEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
+ G ++ EYM SL DY S G + +L ++ + + + Y
Sbjct: 71 EKGGLYIVTEYMAKGSL----VDYLRSRG---------RSVLGGDCLLKFSLDVCEAMEY 117
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
L + +HRDL A NVL+ D K+SDFG+ + E S + + +PE
Sbjct: 118 LEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPE 169
Query: 351 YALHGLFSIKSDVFSFGVLLLETLS 375
FS KSDV+SFG+LL E S
Sbjct: 170 ALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 25/205 (12%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIE 231
+G+G FG V G G +VAVK + N + + F E ++ +L H NLV+L G +E
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 232 Q-GEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
+ G ++ EYM SL DY S G + +L ++ + + + Y
Sbjct: 258 EKGGLYIVTEYMAKGSL----VDYLRSRG---------RSVLGGDCLLKFSLDVCEAMEY 304
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPE 350
L + +HRDL A NVL+ D K+SDFG+ + E S + + +PE
Sbjct: 305 LEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPE 356
Query: 351 YALHGLFSIKSDVFSFGVLLLETLS 375
FS KSDV+SFG+LL E S
Sbjct: 357 ALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 171 KLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
K+GEG G V + + G +VAVK + + Q E NE++++ H N+V ++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ E ++ E++ +L TD S+ L+ + E + Q L
Sbjct: 112 LVGEELWVLMEFLQGGAL----------------TDIVSQVRLNEEQIATVCEAVLQALA 155
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH VIHRD+K+ ++LL D K+SDFG D +VGT +M+P
Sbjct: 156 YLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKXLVGTPYWMAP 210
Query: 350 EYALHGLFSIKSDVFSFGVLLLETL 374
E L++ + D++S G++++E +
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMV 235
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 106/225 (47%), Gaps = 24/225 (10%)
Query: 155 SLAS-ISTATHNFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKS---GQGVEEFKN 209
SLA+ I +F N LG+G F VY+ + ++ G EVA+K + K+ V+ +N
Sbjct: 1 SLATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN 60
Query: 210 EMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASK 269
E+ + +L H +++ L+ + L+ E N ++ +L + P S+
Sbjct: 61 EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR---------VKPFSE 111
Query: 270 GILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG 329
+ I G+LYLH + ++HRDL SN+LL +MN KI+DFG+A
Sbjct: 112 N-----EARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163
Query: 330 GDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
+ GT Y+SPE A ++SDV+S G + L
Sbjct: 164 MP--HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLL 206
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 131/301 (43%), Gaps = 42/301 (13%)
Query: 172 LGEGGFGPVYKGKLLN-GEE-----VAVKRL-SNKSGQGVEEFKNEMILIAKL-HHRNLV 223
LG G FG V + G+E VAVK L S E +E+ +++ L H N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 224 RLFGCCIEQGEKILIYEYMP-NKSLDFFLFDYKYSSGFDMVTDPASKGI-------LDWT 275
L G C G ++I EY L+F + G + +G+ L+
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
+ +AQG+ +L + IHRD+ A NVLL KI DFG+AR ++ +
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMN 210
Query: 336 NMNRIVG-----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTL 390
+ N IV +M+PE +++++SDV+S+G+LL E S N + +
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILV 266
Query: 391 LGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
+ L KD +++ P + +Y +++ C RPT ++ S ++
Sbjct: 267 NSKFYKLVKD--GYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQE 317
Query: 451 E 451
+
Sbjct: 318 Q 318
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + A L+H N+V+ +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 119
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K VAVK L + + + + + +EM ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYK---YSSGFDMVTDPASKGILDWTTRV 278
++ L G C + G +I EY +L +L + +D+ P + + + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ--MTFKDLV 160
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+A+G+ YL + + IHRDL A NVL+ + KI+DFG+AR +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVL+ E +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 156 LASISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKNEMILI 214
+ S+ ++ K+G+G G VY + G+EVA+++++ + E NE++++
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 215 AKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDW 274
+ + N+V + E ++ EY+ SL TD ++ +D
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL----------------TDVVTETCMDE 116
Query: 275 TTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQ 334
+ Q L +LH +VIHR++K+ N+LL D + K++DFG + Q
Sbjct: 117 GQIAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE--Q 171
Query: 335 SNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
S + +VGT +M+PE + K D++S G++ +E +
Sbjct: 172 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 211
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 41/233 (17%)
Query: 158 SISTATH------NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRL--SNKSGQGVEEFK 208
SI++AT N+ + +G+G F V + +L G EVAVK + + + +++
Sbjct: 3 SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 209 NEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPAS 268
E+ ++ L+H N+V+LF + L+ EY + FDY + G + +
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARA 118
Query: 269 KGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF 328
K I + Y HQ ++HRDLKA N+LLDGDMN KI+DFG + F
Sbjct: 119 K-----------FRQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEF 164
Query: 329 GGDELQSNMNRIVGTYGYMSPEYALHGLFSIKS------DVFSFGVLLLETLS 375
+ + ++ G SP YA LF K DV+S GV+L +S
Sbjct: 165 ---TVGNKLDTFCG-----SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K VAVK L + + + + + +EM ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS---GFDMVTDPASKGILDWTTRV 278
++ L G C + G +I EY +L +L + +D+ P + + + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ--MTFKDLV 160
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+A+G+ YL + + IHRDL A NVL+ + KI+DFG+AR +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVL+ E +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K VAVK L + + + + + +EM ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS---GFDMVTDPASKGILDWTTRV 278
++ L G C + G +I EY +L +L + +D+ P + + + V
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ--MTFKDLV 160
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+A+G+ YL + + IHRDL A NVL+ + KI+DFG+AR +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVL+ E +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKL-HHRNLV 223
LG G FG V K +VAVK L K+ E +E+ ++ +L H N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASK--------GILDWT 275
L G C G LI+EY L +L + D + K +L +
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
+ +A+G+ +L S +HRDL A NVL+ KI DFG+AR ++ S
Sbjct: 173 DLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLAR-----DIMS 224
Query: 336 NMNRIVG-----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+ N +V +M+PE G+++IKSDV+S+G+LL E S
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 132/283 (46%), Gaps = 40/283 (14%)
Query: 166 FSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLV 223
F++ K+G+G FG V+KG ++V ++ + ++ +E+ + E+ ++++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ +G ++ + +I EY+ S D++ G LD T I+
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGG------------GSALDLL----EPGPLDETQIATILRE 127
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL YLH + IHRD+KA+NVLL K++DFG+A + Q N VGT
Sbjct: 128 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGT 182
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLE-TLSSKKNTRFYNIDSLTLLGHAWNLWKDDR 402
+M+PE + K+D++S G+ +E ++ + + L L+
Sbjct: 183 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP---------- 232
Query: 403 AWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
K PTL+ P+ K +++ C+ + + RPT E++
Sbjct: 233 --KNNPPTLEGNYSKPL-KEFVEA---CLNKEPSFRPTAKELL 269
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K VAVK L + + + + + +EM ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS---GFDMVTDPASKGILDWTTRV 278
++ L G C + G +I EY +L +L + +D+ P + + + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ--MTFKDLV 160
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+A+G+ YL + + IHRDL A NVL+ + KI+DFG+AR +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVL+ E +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K VAVK L + + + + + +EM ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS---GFDMVTDPASKGILDWTTRV 278
++ L G C + G +I EY +L +L + +D+ P + + + V
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ--MTFKDLV 160
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+A+G+ YL + + IHRDL A NVL+ + KI+DFG+AR +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVL+ E +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 132/283 (46%), Gaps = 40/283 (14%)
Query: 166 FSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLV 223
F++ K+G+G FG V+KG ++V ++ + ++ +E+ + E+ ++++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ +G ++ + +I EY+ S D++ G LD T I+
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGG------------GSALDLL----EPGPLDETQIATILRE 112
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL YLH + IHRD+KA+NVLL K++DFG+A + Q N VGT
Sbjct: 113 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGT 167
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLE-TLSSKKNTRFYNIDSLTLLGHAWNLWKDDR 402
+M+PE + K+D++S G+ +E ++ + + L L+
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP---------- 217
Query: 403 AWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
K PTL+ P+ K +++ C+ + + RPT E++
Sbjct: 218 --KNNPPTLEGNYSKPL-KEFVEA---CLNKEPSFRPTAKELL 254
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 133/283 (46%), Gaps = 40/283 (14%)
Query: 166 FSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLV 223
F++ K+G+G FG V+KG ++V ++ + ++ +E+ + E+ ++++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ +G ++ + +I EY+ S D++ G LD T I+
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGG------------GSALDLL----EPGPLDETQIATILRE 112
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL YLH + IHRD+KA+NVLL K++DFG+A +++ N VGT
Sbjct: 113 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGT 167
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLE-TLSSKKNTRFYNIDSLTLLGHAWNLWKDDR 402
+M+PE + K+D++S G+ +E ++ + + L L+
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP---------- 217
Query: 403 AWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
K PTL+ P+ K +++ C+ + + RPT E++
Sbjct: 218 --KNNPPTLEGNYSKPL-KEFVEA---CLNKEPSFRPTAKELL 254
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 48/306 (15%)
Query: 161 TATHNFSEENKLGEGGFGPVYKGKLL----NGEEVAVKRLSNKSG-QGVEEFKNEMILIA 215
TH+ + +G+G FG VY G+ + N + A+K LS + Q VE F E +L+
Sbjct: 21 VVTHS---DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMR 77
Query: 216 KLHHRNLVRLFGCCIE-QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDW 274
L+H N++ L G + +G ++ YM + L F+ + +P K ++ +
Sbjct: 78 GLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ--------RNPTVKDLISF 129
Query: 275 TTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQ 334
+V A+G+ YL + + +HRDL A N +LD K++DFG+AR E
Sbjct: 130 GLQV------ARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY 180
Query: 335 SNMNRIVGTYGYMSPEY-ALHGL----FSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLT 389
S + + ++ AL L F+ KSDV+SFGVLL E L ++ + +ID
Sbjct: 181 SVQQH---RHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELL-TRGAPPYRHIDPFD 236
Query: 390 LLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIK 449
L + R +L P ++LY ++++ C + + A RPT +V ++
Sbjct: 237 LT----HFLAQGR--RLPQPEYCPDSLYQVMQQ-------CWEADPAVRPTFRVLVGEVE 283
Query: 450 NEIVNL 455
+ L
Sbjct: 284 QIVSAL 289
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K VAVK L + + + + + +EM ++ + H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS---GFDMVTDPASKGILDWTTRV 278
++ L G C + G +I EY +L +L + +D+ P + + + V
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ--MTFKDLV 149
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+A+G+ YL + + IHRDL A NVL+ + KI+DFG+AR +
Sbjct: 150 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVL+ E +
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 27/232 (11%)
Query: 170 NKLGEGGFGPVYKGKLL-----NGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
++LG+G FG V + G VAVK+L + +F+ E+ ++ LH +V+
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 225 LFGCCIEQG--EKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G G E L+ EY+P+ L FL ++ LD + +
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHR--------------ARLDASRLLLYSS 118
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG 342
I +G+ YL SR R +HRDL A N+L++ + + KI+DFG+A++ D+ + R G
Sbjct: 119 QICKGMEYLG--SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DXXVVREPG 174
Query: 343 TYG--YMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLG 392
+ +PE +FS +SDV+SFGV+L E + + + + L ++G
Sbjct: 175 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG 226
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K VAVK L + + + + + +EM ++ + H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS---GFDMVTDPASKGILDWTTRV 278
++ L G C + G +I EY +L +L + +D+ P + + + V
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ--MTFKDLV 147
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+A+G+ YL + + IHRDL A NVL+ + KI+DFG+AR +
Sbjct: 148 SCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVL+ E +
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M A R + G++
Sbjct: 73 REGNIQYLFLEYCSGGEL----FD-RIEPDIGMPEPDAQ----------RFFHQLMAGVV 117
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 118 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K VAVK L + + + + + +EM ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS---GFDMVTDPASKGILDWTTRV 278
++ L G C + G +I EY +L +L + +D+ P + + + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ--MTFKDLV 160
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+A+G+ YL + + IHRDL A NVL+ + +I+DFG+AR +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVL+ E +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K VAVK L + + + + + +EM ++ + H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS---GFDMVTDPASKGILDWTTRV 278
++ L G C + G +I EY +L +L + +D+ P + + + V
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ--MTFKDLV 206
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+A+G+ YL + + IHRDL A NVL+ + KI+DFG+AR +
Sbjct: 207 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVL+ E +
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 131/291 (45%), Gaps = 41/291 (14%)
Query: 170 NKLGEGGFGPVYKGKLL-----NGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
++LG+G FG V + G VAVK+L + +F+ E+ ++ LH +V+
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 225 LFGCCIEQGEKIL--IYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G G + L + EY+P+ L FL ++ LD + +
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--------------ARLDASRLLLYSS 121
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG 342
I +G+ YL R +HRDL A N+L++ + + KI+DFG+A++ D+ + R G
Sbjct: 122 QICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREPG 177
Query: 343 TYG--YMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+ +PE +FS +SDV+SFGV+L E + + + + L ++G ++
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPAL 237
Query: 401 DR-------AWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
R +L P ++ ++K LC + DRP+ S +
Sbjct: 238 SRLLELLEEGQRLPAPPACPAEVHELMK-------LCWAPSPQDRPSFSAL 281
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K VAVK L + + + + + +EM ++ + H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS---GFDMVTDPASKGILDWTTRV 278
++ L G C + G +I EY +L +L + +D+ P + + + V
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ--MTFKDLV 152
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+A+G+ YL + + IHRDL A NVL+ + KI+DFG+AR +
Sbjct: 153 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVL+ E +
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 119
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M A R + G++
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD-RIEPDIGMPEPDAQ----------RFFHQLMAGVV 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 132/283 (46%), Gaps = 40/283 (14%)
Query: 166 FSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLV 223
F++ K+G+G FG V+KG ++V ++ + ++ +E+ + E+ ++++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ +G ++ + +I EY+ S D++ G LD T I+
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGG------------GSALDLL----EPGPLDETQIATILRE 132
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL YLH + IHRD+KA+NVLL K++DFG+A + Q N VGT
Sbjct: 133 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGT 187
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLE-TLSSKKNTRFYNIDSLTLLGHAWNLWKDDR 402
+M+PE + K+D++S G+ +E ++ + + L L+
Sbjct: 188 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP---------- 237
Query: 403 AWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
K PTL+ P+ K +++ C+ + + RPT E++
Sbjct: 238 --KNNPPTLEGNYSKPL-KEFVEA---CLNKEPSFRPTAKELL 274
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 122/293 (41%), Gaps = 34/293 (11%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 83
Query: 222 LVRLFGCCIEQGEKIL-IYEYMPNKSLDFFLFDYKYS-SGFDMVTDPASKGILDWTTRVR 279
+V L G C + G ++ I E+ +L +L + + + + K L +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ +L + + IHRDL A N+LL KI DFG+AR D
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWK 399
+M+PE +++I+SDV+SFGVLL E S L + K
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPYPGVK 246
Query: 400 DDRAW--KLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
D + +L + T Y + Y + L C + RPT SE+V + N
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 298
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 122/293 (41%), Gaps = 34/293 (11%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 83
Query: 222 LVRLFGCCIEQGEKIL-IYEYMPNKSLDFFLFDYKYS-SGFDMVTDPASKGILDWTTRVR 279
+V L G C + G ++ I E+ +L +L + + + + K L +
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ +L + + IHRDL A N+LL KI DFG+AR D
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWK 399
+M+PE +++I+SDV+SFGVLL E S L + K
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPYPGVK 246
Query: 400 DDRAW--KLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
D + +L + T Y + Y + L C + RPT SE+V + N
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 298
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 119
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M A R + G++
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD-RIEPDIGMPEPDAQ----------RFFHQLMAGVV 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M A R + G++
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD-RIEPDIGMPEPDAQ----------RFFHQLMAGVV 119
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 119
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 119
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 119
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 131/291 (45%), Gaps = 41/291 (14%)
Query: 170 NKLGEGGFGPVYKGKLL-----NGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
++LG+G FG V + G VAVK+L + +F+ E+ ++ LH +V+
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 225 LFGCCIEQGEKIL--IYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G G + L + EY+P+ L FL ++ LD + +
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--------------ARLDASRLLLYSS 134
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG 342
I +G+ YL R +HRDL A N+L++ + + KI+DFG+A++ D+ + R G
Sbjct: 135 QICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREPG 190
Query: 343 TYG--YMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+ +PE +FS +SDV+SFGV+L E + + + + L ++G ++
Sbjct: 191 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPAL 250
Query: 401 DR-------AWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
R +L P ++ ++K LC + DRP+ S +
Sbjct: 251 SRLLELLEEGQRLPAPPACPAEVHELMK-------LCWAPSPQDRPSFSAL 294
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG +G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 119
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 122/293 (41%), Gaps = 34/293 (11%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 92
Query: 222 LVRLFGCCIEQGEKIL-IYEYMPNKSLDFFLFDYKYS-SGFDMVTDPASKGILDWTTRVR 279
+V L G C + G ++ I E+ +L +L + + + + K L +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ +L + + IHRDL A N+LL KI DFG+AR D
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWK 399
+M+PE +++I+SDV+SFGVLL E S L + K
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPYPGVK 255
Query: 400 DDRAW--KLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
D + +L + T Y + Y + L C + RPT SE+V + N
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 307
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 24/209 (11%)
Query: 171 KLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
KLGEG +G VYK G+ VA+K++ +S ++E E+ ++ + ++V+ +G
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 230 IEQGEKILIYEYMPNKSL-DFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
+ + ++ EY S+ D K + ++ T I++ +GL
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT---------------ILQSTLKGL 138
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMS 348
YLH +R IHRD+KA N+LL+ + + K++DFG+A + + N ++GT +M+
Sbjct: 139 EYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMA 193
Query: 349 PEYALHGLFSIKSDVFSFGVLLLETLSSK 377
PE ++ +D++S G+ +E K
Sbjct: 194 PEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRL--SNKSGQGVEEFKNEMILIAKLHHRN 221
N+ +G+G F V + +L G EVA+K + + + +++ E+ ++ L+H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+LF + LI EY + FDY + G + SK
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEV----FDYLVAHGRMKEKEARSK-----------F 117
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
I + Y HQ R++HRDLKA N+LLD DMN KI+DFG + F + ++
Sbjct: 118 RQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF---TVGGKLDTFC 171
Query: 342 GTYGYMSPEYALHGLFSIKS------DVFSFGVLLLETLS 375
G+ Y +PE LF K DV+S GV+L +S
Sbjct: 172 GSPPYAAPE-----LFQGKKYDGPEVDVWSLGVILYTLVS 206
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 101/220 (45%), Gaps = 35/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRL--SNKSGQGVEEFKNEMILIAKLHHRN 221
N+ +G+G F V + +L G EVA+K + + + +++ E+ ++ L+H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+LF + LI EY + FDY + G + SK
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEV----FDYLVAHGRMKEKEARSK-----------F 120
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
I + Y HQ R++HRDLKA N+LLD DMN KI+DFG + F + ++
Sbjct: 121 RQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF---TVGGKLDAFC 174
Query: 342 GTYGYMSPEYALHGLFSIKS------DVFSFGVLLLETLS 375
G Y +PE LF K DV+S GV+L +S
Sbjct: 175 GAPPYAAPE-----LFQGKKYDGPEVDVWSLGVILYTLVS 209
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 25/216 (11%)
Query: 164 HNFSEENKLGEGGFGPVYK-GKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNL 222
+ S+ LG G FG V+K + G ++A K + + + EE KNE+ ++ +L H NL
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL 148
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
++L+ + + +L+ EY+ L FD + D + L + ++
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGEL------------FDRIIDESYN--LTELDTILFMK 194
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVL-LDGDMNP-KISDFGIARMFGGDE-LQSNMNR 339
I +G+ ++HQ + ++H DLK N+L ++ D KI DFG+AR + E L+ N
Sbjct: 195 QICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-- 249
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
GT +++PE + S +D++S GV+ LS
Sbjct: 250 --GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS 283
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 123/297 (41%), Gaps = 43/297 (14%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 93
Query: 222 LVRLFGCCIEQGEKIL-IYEYMPNKSLDFFLFDYK-----YSSGFDMVTDPASKGILDWT 275
+V L G C + G ++ I E+ +L +L + Y + D+ D L
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKD-----FLTLE 148
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
+ +A+G+ +L + + IHRDL A N+LL KI DFG+AR D
Sbjct: 149 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAW 395
+M+PE +++I+SDV+SFGVLL E S L +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPY 251
Query: 396 NLWKDDRAW--KLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
K D + +L + T Y + Y + L C + RPT SE+V + N
Sbjct: 252 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 307
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 123/295 (41%), Gaps = 40/295 (13%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 94
Query: 222 LVRLFGCCIEQGEKIL-IYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
+V L G C + G ++ I E+ +L +L S + V D+ T +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYL----RSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 281 IE---GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM 337
I +A+G+ +L + + IHRDL A N+LL KI DFG+AR D
Sbjct: 151 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 338 NRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNL 397
+M+PE +++I+SDV+SFGVLL E S L +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPYPG 253
Query: 398 WKDDRAW--KLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
K D + +L + T Y + Y + L C + RPT SE+V + N
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 307
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 122/293 (41%), Gaps = 34/293 (11%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 83
Query: 222 LVRLFGCCIEQGEKIL-IYEYMPNKSLDFFLFDYKYS-SGFDMVTDPASKGILDWTTRVR 279
+V L G C + G ++ I E+ +L +L + + + + K L +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ +L + + IHRDL A N+LL KI DFG+AR D
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWK 399
+M+PE +++I+SDV+SFGVLL E S L + K
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPYPGVK 246
Query: 400 DDRAW--KLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
D + +L + T Y + Y + L C + RPT SE+V + N
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 298
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 122/293 (41%), Gaps = 34/293 (11%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 92
Query: 222 LVRLFGCCIEQGEKIL-IYEYMPNKSLDFFLFDYKYS-SGFDMVTDPASKGILDWTTRVR 279
+V L G C + G ++ I E+ +L +L + + + + K L +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ +L + + IHRDL A N+LL KI DFG+AR D
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWK 399
+M+PE +++I+SDV+SFGVLL E S L + K
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPYPGVK 255
Query: 400 DDRAW--KLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
D + +L + T Y + Y + L C + RPT SE+V + N
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 307
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 27/232 (11%)
Query: 170 NKLGEGGFGPVYKGKLL-----NGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
++LG+G FG V + G VAVK+L + +F+ E+ ++ LH +V+
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 225 LFGCCIEQGEKIL--IYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
G G + L + EY+P+ L FL ++ LD + +
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--------------ARLDASRLLLYSS 122
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVG 342
I +G+ YL R +HRDL A N+L++ + + KI+DFG+A++ D+ + R G
Sbjct: 123 QICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREPG 178
Query: 343 TYG--YMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLG 392
+ +PE +FS +SDV+SFGV+L E + + + + L ++G
Sbjct: 179 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG 230
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 122/293 (41%), Gaps = 34/293 (11%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 83
Query: 222 LVRLFGCCIEQGEKIL-IYEYMPNKSLDFFLFDYKYS-SGFDMVTDPASKGILDWTTRVR 279
+V L G C + G ++ I E+ +L +L + + + + K L +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ +L + + IHRDL A N+LL KI DFG+AR D
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWK 399
+M+PE +++I+SDV+SFGVLL E S L + K
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPYPGVK 246
Query: 400 DDRAW--KLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
D + +L + T Y + Y + L C + RPT SE+V + N
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 298
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 172 LGEGGFGPVYK-GKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
LG+G FG K GE + +K L + F E+ ++ L H N+++ G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 231 EQGEKILIYEYMPNKSLDFFL--FDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
+ I EY+ +L + D +Y W+ RV + IA G+
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQYP----------------WSQRVSFAKDIASGM 121
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR--------- 339
YLH + +IHRDL + N L+ + N ++DFG+AR+ ++ Q R
Sbjct: 122 AYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178
Query: 340 ---IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
+VG +M+PE + K DVFSFG++L E +
Sbjct: 179 RYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 18/217 (8%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K VAVK L + + + + + +EM ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS---GFDMVTDPASKGILDWTTRV 278
++ L G C + G +I Y +L +L + +D+ P + + + V
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ--MTFKDLV 160
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+A+G+ YL + + IHRDL A NVL+ + KI+DFG+AR +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVL+ E +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 104/239 (43%), Gaps = 51/239 (21%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+F E +G GGFG V+K K ++G+ ++R+ + E+ + E+ +AKL H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIV 68
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPAS--------------- 268
GC G ++Y P S D SS +D S
Sbjct: 69 HYNGCW--DG-----FDYDPETSDDSL-----ESSDYDPENSKNSSRSKTKCLFIQMEFC 116
Query: 269 -KGILD-WTTRVR-----------IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDM 315
KG L+ W + R + E I +G+ Y+H ++IHRDLK SN+ L
Sbjct: 117 DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTK 173
Query: 316 NPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
KI DFG+ D R GT YMSPE + + D+++ G++L E L
Sbjct: 174 QVKIGDFGLVTSLKND---GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 122/293 (41%), Gaps = 34/293 (11%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 92
Query: 222 LVRLFGCCIEQGEKIL-IYEYMPNKSLDFFLFDYKYS-SGFDMVTDPASKGILDWTTRVR 279
+V L G C + G ++ I E+ +L +L + + + + K L +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ +L + + IHRDL A N+LL KI DFG+AR D
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWK 399
+M+PE +++I+SDV+SFGVLL E S L + K
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPYPGVK 255
Query: 400 DDRAW--KLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
D + +L + T Y + Y + L C + RPT SE+V + N
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 307
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 122/293 (41%), Gaps = 34/293 (11%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 129
Query: 222 LVRLFGCCIEQGEKIL-IYEYMPNKSLDFFLFDYKYS-SGFDMVTDPASKGILDWTTRVR 279
+V L G C + G ++ I E+ +L +L + + + + K L +
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ +L + + IHRDL A N+LL KI DFG+AR D
Sbjct: 190 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWK 399
+M+PE +++I+SDV+SFGVLL E S L + K
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPYPGVK 292
Query: 400 DDRAW--KLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
D + +L + T Y + Y + L C + RPT SE+V + N
Sbjct: 293 IDEEFCRRLKEGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 344
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGCC 229
LGEG G V + E VAVK + K E K E+ + L+H N+V+ +G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
E + L EY L FD + M +P ++ R + G++
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD-RIEPDIGM-PEPDAQ---------RFFHQLMAGVV 118
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH + + HRD+K N+LLD N KISDFG+A +F + + +N++ GT Y++P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 350 EYALHGLFSIKS-DVFSFGVLLLETLSSK 377
E F + DV+S G++L L+ +
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRL--SNKSGQGVEEFKNEMILIAKLHHRN 221
N+ +G+G F V + +L G+EVAVK + + + +++ E+ ++ L+H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+LF + L+ EY + FDY + G+ + +K
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEV----FDYLVAHGWMKEKEARAK-----------F 112
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
I + Y HQ ++HRDLKA N+LLD DMN KI+DFG + F + ++
Sbjct: 113 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDTFC 166
Query: 342 GTYGYMSPEYALHGLFSIKS------DVFSFGVLLLETLS 375
G SP YA LF K DV+S GV+L +S
Sbjct: 167 G-----SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 201
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 28/214 (13%)
Query: 175 GGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGE 234
G FG V+K +LLN E VAVK + Q + + E+ + + H N+++ G ++G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGA-EKRGT 91
Query: 235 KILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQY 294
+ +D +L + G ++D ++ W I E +A+GL YLH+
Sbjct: 92 SV---------DVDLWLITAFHEKG--SLSDFLKANVVSWNELCHIAETMARGLAYLHED 140
Query: 295 -------SRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
+ + HRD+K+ NVLL ++ I+DFG+A F + + + VGT YM
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 348 SPEYALHGLFSIKSDVF------SFGVLLLETLS 375
+PE L G + + D F + G++L E S
Sbjct: 201 APE-VLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 18/217 (8%)
Query: 172 LGEGGFGPVY--------KGKLLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKL-HHRN 221
LGEG FG V K K VAVK L + + + + + +EM ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS---GFDMVTDPASKGILDWTTRV 278
++ L G C + G +I Y +L +L + +D+ P + + + V
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ--MTFKDLV 160
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+A+G+ YL + + IHRDL A NVL+ + KI+DFG+AR +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++ +SDV+SFGVL+ E +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 103
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
C + EK+ F Y+ +++ G D T I
Sbjct: 104 FCFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 149
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y+
Sbjct: 150 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 206
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLS 375
SPE SD+++ G ++ + ++
Sbjct: 207 SPELLTEKSACKSSDLWALGCIIYQLVA 234
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 172 LGEGGFGPVYK------GKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRL 225
+G G +G K GK+L +E+ ++ Q + +E+ L+ +L H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML---VSEVNLLRELKHPNIVRY 70
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASK--GILDWTTRVRIIEG 283
+ I++ L + + +Y V +K LD +R++
Sbjct: 71 YDRIIDRTNTTL-----------YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 284 IAQGLLYLHQYSR--LRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ L H+ S V+HRDLK +NV LDG N K+ DFG+AR+ DE V
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE--DFAKEFV 177
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
GT YMSPE ++ KSD++S G LL E
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
LG+G +G VY G+ L N +A+K + + + + E+ L L H+N+V+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
E G + E +P SL L S + + D ++ + + T+ I +GL Y
Sbjct: 90 ENGFIKIFMEQVPGGSLSALL-----RSKWGPLKD--NEQTIGFYTK-----QILEGLKY 137
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
LH +++HRD+K NVL++ KISDFG ++ G + GT YM+P
Sbjct: 138 LHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAP 192
Query: 350 EYALHGL--FSIKSDVFSFGVLLLETLSSKKNTRFYNI 385
E G + +D++S G ++E + K FY +
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGK--PPFYEL 228
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 28/221 (12%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+F E +G GGFG V+K K ++G+ +KR+ + E+ + E+ +AKL H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIV 67
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLD----------FFLFDYKYSSGFDMVTDPASKGILD 273
GC G ++Y P S F ++ + + LD
Sbjct: 68 HYNGCW--DG-----FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 120
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL 333
+ + E I +G+ Y+H ++I+RDLK SN+ L KI DFG+ D
Sbjct: 121 KVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND-- 175
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
R GT YMSPE + + D+++ G++L E L
Sbjct: 176 -GKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 124/295 (42%), Gaps = 38/295 (12%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 94
Query: 222 LVRLFGCCIEQGEKIL-IYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
+V L G C + G ++ I E+ +L +L + + F + D+ T +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR--NEFVPYKEAPEDLYKDFLTLEHL 152
Query: 281 I---EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM 337
I +A+G+ +L + + IHRDL A N+LL KI DFG+AR D
Sbjct: 153 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 338 NRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNL 397
+M+PE +++I+SDV+SFGVLL E S L +
Sbjct: 210 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPYPG 255
Query: 398 WKDDRAW--KLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
K D + +L + T Y + Y + L C + RPT SE+V + N
Sbjct: 256 VKIDEEFCRRLKEGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 309
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 114/237 (48%), Gaps = 41/237 (17%)
Query: 153 FFSLASISTATHNFSEEN------KLGEGGFGPVYKGKLLNGEE---VAVKRLSNKSGQG 203
F S+ T + + E+ +LG+G FG VYK + N E A K + KS +
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEE 77
Query: 204 VEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMV 263
+E++ E+ ++A H N+V+L + ++ E+ ++D + + +
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER------- 130
Query: 264 TDPASKGILDWTTRVRII-EGIAQGLLYLHQYSRLRVIHRDLKASNVL--LDGDMNPKIS 320
P ++ ++++++ + L YLH ++IHRDLKA N+L LDGD+ K++
Sbjct: 131 --PLTE------SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDI--KLA 177
Query: 321 DFGIARMFGGDELQSNMNRIVGTYGYMSPEYAL-----HGLFSIKSDVFSFGVLLLE 372
DFG++ + +GT +M+PE + + K+DV+S G+ L+E
Sbjct: 178 DFGVSA--KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 232
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 92
Query: 222 LVRLFGCCIEQGEKIL-IYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
+V L G C + G ++ I E+ +L +L S + V P D+ T +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYL----RSKRNEFV--PYKDLYKDFLTLEHL 146
Query: 281 IE---GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM 337
I +A+G+ +L + + IHRDL A N+LL KI DFG+AR D
Sbjct: 147 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 338 NRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+M+PE +++I+SDV+SFGVLL E S
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 44/226 (19%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFG---- 227
+G G +G VYKG L + VAVK S + Q KN + + + H N+ R
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIARFIVGDER 78
Query: 228 -CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
+ E +L+ EY PN SL +L S DW + R+ + +
Sbjct: 79 VTADGRMEYLLVMEYYPNGSLXKYL----------------SLHTSDWVSSCRLAHSVTR 122
Query: 287 GLLYLH------QYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL----QSN 336
GL YLH + + + HRDL + NVL+ D ISDFG++ G+ L + +
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 337 MNRI--VGTYGYMSPEYALHGLFSIKS--------DVFSFGVLLLE 372
I VGT YM+PE L G +++ D+++ G++ E
Sbjct: 183 NAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWE 227
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 114/237 (48%), Gaps = 41/237 (17%)
Query: 153 FFSLASISTATHNFSEEN------KLGEGGFGPVYKGKLLNGEE---VAVKRLSNKSGQG 203
F S+ T + + E+ +LG+G FG VYK + N E A K + KS +
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEE 77
Query: 204 VEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMV 263
+E++ E+ ++A H N+V+L + ++ E+ ++D + + +
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER------- 130
Query: 264 TDPASKGILDWTTRVRII-EGIAQGLLYLHQYSRLRVIHRDLKASNVL--LDGDMNPKIS 320
P ++ ++++++ + L YLH ++IHRDLKA N+L LDGD+ K++
Sbjct: 131 --PLTE------SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDI--KLA 177
Query: 321 DFGIARMFGGDELQSNMNRIVGTYGYMSPEYAL-----HGLFSIKSDVFSFGVLLLE 372
DFG++ + +GT +M+PE + + K+DV+S G+ L+E
Sbjct: 178 DFGVSA--KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 232
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 172 LGEGGFGPVYK------GKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRL 225
+G G +G K GK+L +E+ ++ Q + +E+ L+ +L H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML---VSEVNLLRELKHPNIVRY 70
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASK--GILDWTTRVRIIEG 283
+ I++ L + + +Y V +K LD +R++
Sbjct: 71 YDRIIDRTNTTL-----------YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 284 IAQGLLYLHQYSR--LRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ L H+ S V+HRDLK +NV LDG N K+ DFG+AR+ D S V
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSFAKTFV 177
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
GT YMSPE ++ KSD++S G LL E
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
LG+G +G VY G+ L N +A+K + + + + E+ L L H+N+V+ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
E G + E +P SL L S + + D ++ + + T+ I +GL Y
Sbjct: 76 ENGFIKIFMEQVPGGSLSALL-----RSKWGPLKD--NEQTIGFYTK-----QILEGLKY 123
Query: 291 LHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
LH +++HRD+K NVL++ KISDFG ++ G + GT YM+P
Sbjct: 124 LHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAP 178
Query: 350 EYALHGL--FSIKSDVFSFGVLLLETLSSK 377
E G + +D++S G ++E + K
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 114/237 (48%), Gaps = 41/237 (17%)
Query: 153 FFSLASISTATHNFSEEN------KLGEGGFGPVYKGKLLNGEE---VAVKRLSNKSGQG 203
F S+ T + + E+ +LG+G FG VYK + N E A K + KS +
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEE 77
Query: 204 VEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMV 263
+E++ E+ ++A H N+V+L + ++ E+ ++D + + +
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER------- 130
Query: 264 TDPASKGILDWTTRVRII-EGIAQGLLYLHQYSRLRVIHRDLKASNVL--LDGDMNPKIS 320
P ++ ++++++ + L YLH ++IHRDLKA N+L LDGD+ K++
Sbjct: 131 --PLTE------SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDI--KLA 177
Query: 321 DFGIARMFGGDELQSNMNRIVGTYGYMSPEYAL-----HGLFSIKSDVFSFGVLLLE 372
DFG++ + +GT +M+PE + + K+DV+S G+ L+E
Sbjct: 178 DFGVSA--KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 232
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRL--SNKSGQGVEEFKNEMILIAKLHHRN 221
N+ +G+G F V + +L G+EVAVK + + + +++ E+ ++ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+LF + L+ EY + FDY + G + +K
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAK-----------F 119
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
I + Y HQ ++HRDLKA N+LLD DMN KI+DFG + F + ++
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDTFC 173
Query: 342 GTYGYMSPEYALHGLFSIKS------DVFSFGVLLLETLS 375
G+ Y +PE LF K DV+S GV+L +S
Sbjct: 174 GSPPYAAPE-----LFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 172 LGEGGFGPVYK------GKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRL 225
+G G +G K GK+L +E+ ++ Q + +E+ L+ +L H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML---VSEVNLLRELKHPNIVRY 70
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASK--GILDWTTRVRIIEG 283
+ I++ L + + +Y V +K LD +R++
Sbjct: 71 YDRIIDRTNTTL-----------YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 284 IAQGLLYLHQYSR--LRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ L H+ S V+HRDLK +NV LDG N K+ DFG+AR+ D S V
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSFAKAFV 177
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
GT YMSPE ++ KSD++S G LL E
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 120/311 (38%), Gaps = 74/311 (23%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 92
Query: 222 LVRLFGCCIEQGEKILIY------------------EYMPNKSL--DFFLFDYKYSSGFD 261
+V L G C + G +++ E++P K L DF ++ F
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 262 MVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISD 321
+A+G+ +L + + IHRDL A N+LL KI D
Sbjct: 153 ----------------------VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICD 187
Query: 322 FGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTR 381
FG+AR D +M+PE +++I+SDV+SFGVLL E S
Sbjct: 188 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------ 241
Query: 382 FYNIDSLTLLGHAWNLWKDDRAW--KLLDPTLQNEALYPMVKRYIKVALLCVQENAADRP 439
L + K D + +L + T Y + Y + L C + RP
Sbjct: 242 --------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRP 292
Query: 440 TMSEVVSMIKN 450
T SE+V + N
Sbjct: 293 TFSELVEHLGN 303
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 170 NKLGEGGFGPVYKGKL-LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVRLFG 227
++G G FG V+ G+L + VAVK ++ +F E ++ + H N+VRL G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
C ++ ++ E + + DF F + T+ A L T ++++ A G
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTF---------LRTEGAR---LRVKTLLQMVGDAAAG 225
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
+ YL IHRDL A N L+ KISDFG++R ++ +
Sbjct: 226 MEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT 282
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLS 375
+PE +G +S +SDV+SFG+LL ET S
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRL--SNKSGQGVEEFKNEMILIAKLHHRN 221
N+ +G+G F V + +L G+EVAVK + + + +++ E+ ++ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+LF + L+ EY + FDY + G + +K
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAK-----------F 119
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
I + Y HQ ++HRDLKA N+LLD DMN KI+DFG + F + ++
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDTFC 173
Query: 342 GTYGYMSPEYALHGLFSIKS------DVFSFGVLLLETLS 375
G+ Y +PE LF K DV+S GV+L +S
Sbjct: 174 GSPPYAAPE-----LFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 23/208 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRNLVRLFGC 228
K+GEG +G VYK + GE A+K++ K +G+ E+ ++ +L H N+V+L+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
+ +L++E++ D D+ +G L+ T + + G+
Sbjct: 69 IHTKKRLVLVFEHL----------DQDLKKLLDV-----CEGGLESVTAKSFLLQLLNGI 113
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMS 348
Y H RV+HRDLK N+L++ + KI+DFG+AR F G ++ + IV T Y +
Sbjct: 114 AYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV-TLWYRA 168
Query: 349 PEYAL-HGLFSIKSDVFSFGVLLLETLS 375
P+ + +S D++S G + E ++
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 170 NKLGEGGFGPVYKGKL-LNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVRLFG 227
++G G FG V+ G+L + VAVK ++ +F E ++ + H N+VRL G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
C ++ ++ E + + DF F + T+ A L T ++++ A G
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTF---------LRTEGAR---LRVKTLLQMVGDAAAG 225
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
+ YL IHRDL A N L+ KISDFG++R ++ +
Sbjct: 226 MEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT 282
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLS 375
+PE +G +S +SDV+SFG+LL ET S
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 23/208 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRNLVRLFGC 228
K+GEG +G VYK + GE A+K++ K +G+ E+ ++ +L H N+V+L+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
+ +L++E++ D D+ +G L+ T + + G+
Sbjct: 69 IHTKKRLVLVFEHL----------DQDLKKLLDV-----CEGGLESVTAKSFLLQLLNGI 113
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMS 348
Y H RV+HRDLK N+L++ + KI+DFG+AR F G ++ + +V T Y +
Sbjct: 114 AYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRA 168
Query: 349 PEYAL-HGLFSIKSDVFSFGVLLLETLS 375
P+ + +S D++S G + E ++
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 35/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRL--SNKSGQGVEEFKNEMILIAKLHHRN 221
N+ +G+G F V + +L G+EVAVK + + + +++ E+ ++ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+LF + L+ EY + FDY + G + +K
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAK-----------F 119
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
I + Y HQ ++HRDLKA N+LLD DMN KI+DFG + F + ++
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDAFC 173
Query: 342 GTYGYMSPEYALHGLFSIKS------DVFSFGVLLLETLS 375
G Y +PE LF K DV+S GV+L +S
Sbjct: 174 GAPPYAAPE-----LFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 23/208 (11%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLS-NKSGQGVEEFK-NEMILIAKLHHRNLVRLFGC 228
K+GEG +G VYK + GE A+K++ K +G+ E+ ++ +L H N+V+L+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
+ +L++E++ D D+ +G L+ T + + G+
Sbjct: 69 IHTKKRLVLVFEHL----------DQDLKKLLDV-----CEGGLESVTAKSFLLQLLNGI 113
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMS 348
Y H RV+HRDLK N+L++ + KI+DFG+AR F G ++ + +V T Y +
Sbjct: 114 AYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRA 168
Query: 349 PEYAL-HGLFSIKSDVFSFGVLLLETLS 375
P+ + +S D++S G + E ++
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRL--SNKSGQGVEEFKNEMILIAKLHHRN 221
N+ +G+G F V + +L G+EVAV+ + + + +++ E+ ++ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+LF + L+ EY + FDY + G + +K
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAK-----------F 119
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
I + Y HQ ++HRDLKA N+LLD DMN KI+DFG + F + ++
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDEFC 173
Query: 342 GTYGYMSPEYALHGLFSIKS------DVFSFGVLLLETLS 375
G+ Y +PE LF K DV+S GV+L +S
Sbjct: 174 GSPPYAAPE-----LFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 19/190 (10%)
Query: 171 KLGEGGFGPVYKGKLL-NGEEVAVKRL---SNKSGQGVEEFKNEMILIAKLHHRNLVRLF 226
K+G+G FG V+K + G++VA+K++ + K G + + E+ ++ L H N+V L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLI 83
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
C + Y K+ + +FD+ ++++ K L RV ++ +
Sbjct: 84 EICRTKAS-----PYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV--MQMLLN 136
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG-GDELQSN--MNRIVGT 343
GL Y+H R +++HRD+KA+NVL+ D K++DFG+AR F Q N NR+V T
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 344 YGYMSPEYAL 353
Y PE L
Sbjct: 193 LWYRPPELLL 202
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 35/231 (15%)
Query: 157 ASISTATH--NFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNK-----SGQGVEEFK 208
+S++ H N+ LGEG FG V G++VA+K ++ K QG +
Sbjct: 5 SSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIE 62
Query: 209 NEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPAS 268
E+ + L H ++++L+ + E I++ EY N+ LFDY D +++ +
Sbjct: 63 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQR--DKMSEQEA 115
Query: 269 KGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIAR-M 327
+ R + I + Y H++ +++HRDLK N+LLD +N KI+DFG++ M
Sbjct: 116 R---------RFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 163
Query: 328 FGGDELQSNMNRIVGTYGYMSPEYALHGLFS-IKSDVFSFGVLLLETLSSK 377
G+ L+++ G+ Y +PE L++ + DV+S GV+L L +
Sbjct: 164 TDGNFLKTS----CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNK--SGQGVEEFKNEMILIAKLHHRNLVRLF 226
+LG+G F V + K+L G+E A K ++ K S + ++ + E + L H N+VRL
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
E+G LI++ + +G ++ D ++ I+ I +
Sbjct: 88 DSISEEGHHYLIFDLV---------------TGGELFEDIVAREYYSEADASHCIQQILE 132
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMN---PKISDFGIARMFGGDELQSNMNRIVGT 343
+L+ HQ + V+HRDLK N+LL + K++DFG+A G+ Q GT
Sbjct: 133 AVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE--QQAWFGFAGT 187
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLL 370
GY+SPE + D+++ GV+L
Sbjct: 188 PGYLSPEVLRKDPYGKPVDLWACGVIL 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 35/231 (15%)
Query: 157 ASISTATH--NFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNK-----SGQGVEEFK 208
+S++ H N+ LGEG FG V G++VA+K ++ K QG +
Sbjct: 4 SSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIE 61
Query: 209 NEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPAS 268
E+ + L H ++++L+ + E I++ EY N+ LFDY D +++ +
Sbjct: 62 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQR--DKMSEQEA 114
Query: 269 KGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIAR-M 327
+ R + I + Y H++ +++HRDLK N+LLD +N KI+DFG++ M
Sbjct: 115 R---------RFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162
Query: 328 FGGDELQSNMNRIVGTYGYMSPEYALHGLFS-IKSDVFSFGVLLLETLSSK 377
G+ L+++ G+ Y +PE L++ + DV+S GV+L L +
Sbjct: 163 TDGNFLKTS----CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 18/220 (8%)
Query: 161 TATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFK-NEMILIAKLH 218
+++ F + KLG G + VYKG G VA+K + S +G E+ L+ +L
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
H N+VRL+ + + L++E+M N KY + P L+
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDL-------KKYMDSRTVGNTPRG---LELNLVK 111
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+ QGL + H+ +++HRDLK N+L++ K+ DFG+AR FG + +
Sbjct: 112 YFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP--VNTFS 166
Query: 339 RIVGTYGYMSPEYALHG-LFSIKSDVFSFGVLLLETLSSK 377
V T Y +P+ + +S D++S G +L E ++ K
Sbjct: 167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 35/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRL--SNKSGQGVEEFKNEMILIAKLHHRN 221
N+ +G+G F V + +L G+EVAV+ + + + +++ E+ ++ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+LF + L+ EY + FDY + G + +K
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAK-----------F 119
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
I + Y HQ ++HRDLKA N+LLD DMN KI+DFG + F + ++
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDTFC 173
Query: 342 GTYGYMSPEYALHGLFSIKS------DVFSFGVLLLETLS 375
G SP YA LF K DV+S GV+L +S
Sbjct: 174 G-----SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 19/190 (10%)
Query: 171 KLGEGGFGPVYKGKLL-NGEEVAVKRL---SNKSGQGVEEFKNEMILIAKLHHRNLVRLF 226
K+G+G FG V+K + G++VA+K++ + K G + + E+ ++ L H N+V L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLI 83
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
C + Y K + +FD+ ++++ K L RV ++ +
Sbjct: 84 EICRTKASP-----YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV--MQMLLN 136
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG-GDELQSN--MNRIVGT 343
GL Y+H R +++HRD+KA+NVL+ D K++DFG+AR F Q N NR+V T
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 344 YGYMSPEYAL 353
Y PE L
Sbjct: 193 LWYRPPELLL 202
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 107/217 (49%), Gaps = 23/217 (10%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSN--KSGQGVEEFKNEMILIA 215
+I+ F++ ++G+G FG V+KG ++V ++ + ++ +E+ + E+ +++
Sbjct: 17 NIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLS 76
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
+ + + +G ++ + +I EY+ S D++ G D
Sbjct: 77 QCDSSYVTKYYGSYLKGSKLWIIMEYLGG------------GSALDLL----RAGPFDEF 120
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
+++ I +GL YLH + IHRD+KA+NVLL + K++DFG+A + Q
Sbjct: 121 QIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQI 175
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
N VGT +M+PE + K+D++S G+ +E
Sbjct: 176 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIE 212
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 29/218 (13%)
Query: 175 GGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGE 234
G FG V+K +L+N + VAVK + Q + + E+ + H NL++
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQF--------- 74
Query: 235 KILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQY 294
I + N ++ +L + G +TD I+ W + E +++GL YLH+
Sbjct: 75 -IAAEKRGSNLEVELWLITAFHDKG--SLTDYLKGNIITWNELCHVAETMSRGLSYLHED 131
Query: 295 --------SRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
+ + HRD K+ NVLL D+ ++DFG+A F + + + VGT Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 347 MSPEYALHGLFSIKSDVF------SFGVLLLETLSSKK 378
M+PE L G + + D F + G++L E +S K
Sbjct: 192 MAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCK 228
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 172 LGEGGFGPVYKGK---LLNGEE---VAVKRLSNKSG-QGVEEFKNEMILIAKL-HHRNLV 223
LG G FG V + L+ + VAVK L + E +E+ +++ L +H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L G C G ++I EY L FL K S T PA + + +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELALDLEDLLS 165
Query: 284 ----IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ +L + IHRDL A N+LL KI DFG+AR +++++ N
Sbjct: 166 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-----DIKNDSNY 217
Query: 340 IVG-----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS--------SKKNTRFYNID 386
+V +M+PE + +++ +SDV+S+G+ L E S +++FY +
Sbjct: 218 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 277
Query: 387 SLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVS 446
+++L P +Y ++K C + RPT ++V
Sbjct: 278 K--------------EGFRMLSPEHAPAEMYDIMKT-------CWDADPLKRPTFKQIVQ 316
Query: 447 MIKNEI 452
+I+ +I
Sbjct: 317 LIEKQI 322
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 134/298 (44%), Gaps = 39/298 (13%)
Query: 172 LGEGGFGPVYKGK---LLNGEE---VAVKRLSNKSG-QGVEEFKNEMILIAKL-HHRNLV 223
LG G FG V + L+ + VAVK L + E +E+ +++ L +H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L G C G ++I EY L FL K S T PA + + +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 284 ----IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ +L + IHRDL A N+LL KI DFG+AR +++++ N
Sbjct: 150 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-----DIKNDSNY 201
Query: 340 IVG-----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHA 394
+V +M+PE + +++ +SDV+S+G+ L E S + + +
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP----YPGMPVDSKF 257
Query: 395 WNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNEI 452
+ + K+ +++L P +Y ++K C + RPT ++V +I+ +I
Sbjct: 258 YKMIKE--GFRMLSPEHAPAEMYDIMKT-------CWDADPLKRPTFKQIVQLIEKQI 306
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 45/301 (14%)
Query: 172 LGEGGFGPVYKGK---LLNGEE---VAVKRLSNKSG-QGVEEFKNEMILIAKL-HHRNLV 223
LG G FG V + L+ + VAVK L + E +E+ +++ L +H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L G C G ++I EY L FL K S T PA + + +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 284 ----IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ +L + IHRDL A N+LL KI DFG+AR D
Sbjct: 173 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS--------SKKNTRFYNIDSLTLL 391
+M+PE + +++ +SDV+S+G+ L E S +++FY +
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK---- 285
Query: 392 GHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKNE 451
+++L P +Y ++K C + RPT ++V +I+ +
Sbjct: 286 ----------EGFRMLSPEHAPAEMYDIMKT-------CWDADPLKRPTFKQIVQLIEKQ 328
Query: 452 I 452
I
Sbjct: 329 I 329
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 25/227 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+F E LG+G FG V K + L+ A+K++ + + + + +E++L+A L+H+ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVV 65
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDY-KYSSGFDMVTDPASKGILD--WTTRVRI 280
R + +E+ + + KS F +Y + + +D++ D W R+
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RL 121
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIA----RMFGGDELQS- 335
I + L Y+H +IHRDLK N+ +D N KI DFG+A R +L S
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 336 -------NMNRIVGTYGYMSPEYAL-HGLFSIKSDVFSFGVLLLETL 374
N+ +GT Y++ E G ++ K D++S G++ E +
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 19/190 (10%)
Query: 171 KLGEGGFGPVYKGKLL-NGEEVAVKRL---SNKSGQGVEEFKNEMILIAKLHHRNLVRLF 226
K+G+G FG V+K + G++VA+K++ + K G + + E+ ++ L H N+V L
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLI 82
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
C + Y K + +FD+ ++++ K L RV ++ +
Sbjct: 83 EICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV--MQMLLN 135
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG-GDELQSN--MNRIVGT 343
GL Y+H R +++HRD+KA+NVL+ D K++DFG+AR F Q N NR+V T
Sbjct: 136 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 191
Query: 344 YGYMSPEYAL 353
Y PE L
Sbjct: 192 LWYRPPELLL 201
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 159 ISTATHNFSEENKLGE----GGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVE---EFKNE 210
++T +H S+ +LGE GG V+ + L + +VAVK L + F+ E
Sbjct: 4 MTTPSH-LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 211 MILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKG 270
A L+H +V ++ + GE P L + + +Y G + ++G
Sbjct: 63 AQNAAALNHPAIVAVY----DTGEA-----ETPAGPLPYIVMEY--VDGVTLRDIVHTEG 111
Query: 271 ILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG- 329
+ + +I Q L + HQ +IHRD+K +N+L+ K+ DFGIAR
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIAD 168
Query: 330 -GDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKK 378
G+ + ++GT Y+SPE A +SDV+S G +L E L+ +
Sbjct: 169 SGNSVXQTAA-VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 19/190 (10%)
Query: 171 KLGEGGFGPVYKGKLL-NGEEVAVKRL---SNKSGQGVEEFKNEMILIAKLHHRNLVRLF 226
K+G+G FG V+K + G++VA+K++ + K G + + E+ ++ L H N+V L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLI 83
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
C + Y K + +FD+ ++++ K L RV ++ +
Sbjct: 84 EICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV--MQMLLN 136
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG-GDELQSN--MNRIVGT 343
GL Y+H R +++HRD+KA+NVL+ D K++DFG+AR F Q N NR+V T
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 344 YGYMSPEYAL 353
Y PE L
Sbjct: 193 LWYRPPELLL 202
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 35/238 (14%)
Query: 148 ESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKL-LNGEEVAVKRLSNKSGQGVEE 206
E WF+ F + LG GGFG V+ ++ G+ A K+L+ K + +
Sbjct: 184 EDWFLDFRV---------------LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 207 FKNEMI---LIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMV 263
++ M+ ++AK+H R +V L + + L+ M + + +++
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN---------- 278
Query: 264 TDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFG 323
D + G + + I GL +LHQ + +I+RDLK NVLLD D N +ISD G
Sbjct: 279 VDEDNPGFQE-PRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLG 334
Query: 324 IARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTR 381
+A Q+ GT G+M+PE L + D F+ GV L E ++++ R
Sbjct: 335 LAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 111/249 (44%), Gaps = 33/249 (13%)
Query: 156 LASISTATHNFSEENKLGEGGFGPVYKGKLLNGE----EVAVKRLSNK--SGQGVEEFKN 209
L + F+ LG+G FG V + +L + +VAVK L + +EEF
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 210 EMILIAKLHHRNLVRLFGCCIEQGEK------ILIYEYMPNKSLDFFLFDYKYSSGFDMV 263
E + + H ++ +L G + K ++I +M + L FL +
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGE----- 129
Query: 264 TDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFG 323
+P + L T VR + IA G+ YL S IHRDL A N +L DM ++DFG
Sbjct: 130 -NPFN---LPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFG 182
Query: 324 IAR-MFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKK---- 378
++R ++ GD + + +++ E L+++ SDV++FGV + E ++ +
Sbjct: 183 LSRKIYSGDYYRQGCASKLPV-KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYA 241
Query: 379 ---NTRFYN 384
N YN
Sbjct: 242 GIENAEIYN 250
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 30/238 (12%)
Query: 187 NGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKS 246
N +++++K ++FKNE+ +I + + + G E +IYEYM N S
Sbjct: 77 NNDKISIK-------SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS 129
Query: 247 LDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKA 306
+ K+ F V D + II+ + Y+H + + HRD+K
Sbjct: 130 I------LKFDEYF-FVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKP 180
Query: 307 SNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALH--GLFSIKSDVF 364
SN+L+D + K+SDFG + +++ + GTY +M PE+ + K D++
Sbjct: 181 SNILMDKNGRVKLSDFGESEYMVDKKIKGSR----GTYEFMPPEFFSNESSYNGAKVDIW 236
Query: 365 SFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKR 422
S G+ L FYN+ +L L+ + R + P +N LYP+ +
Sbjct: 237 SLGICLY--------VMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNK 286
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 25/227 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+F E LG+G FG V K + L+ A+K++ + + + + +E++L+A L+H+ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVV 65
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDY-KYSSGFDMVTDPASKGILD--WTTRVRI 280
R + +E+ + + KS F +Y + + +D++ D W R+
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RL 121
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIA----RMFGGDELQS- 335
I + L Y+H +IHRDLK N+ +D N KI DFG+A R +L S
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 336 -------NMNRIVGTYGYMSPEYAL-HGLFSIKSDVFSFGVLLLETL 374
N+ +GT Y++ E G ++ K D++S G++ E +
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 172 LGEGGFGPVYKGK---LLNGE---EVAVKRLSNKSG-QGVEEFKNEMILIAKL-HHRNLV 223
LG G FG V + L+ + VAVK L + E +E+ +++ L +H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L G C G ++I EY L FL K S T PA + + +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELALDLEDLLS 167
Query: 284 ----IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ +L + IHRDL A N+LL KI DFG+AR +++++ N
Sbjct: 168 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-----DIKNDSNY 219
Query: 340 IVG-----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS--------SKKNTRFYNID 386
+V +M+PE + +++ +SDV+S+G+ L E S +++FY +
Sbjct: 220 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 279
Query: 387 SLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVS 446
+++L P +Y ++K C + RPT ++V
Sbjct: 280 K--------------EGFRMLSPEHAPAEMYDIMKT-------CWDADPLKRPTFKQIVQ 318
Query: 447 MIKNEI 452
+I+ +I
Sbjct: 319 LIEKQI 324
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 128/286 (44%), Gaps = 35/286 (12%)
Query: 159 ISTATHNFSEENKLGE----GGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVE---EFKNE 210
++T +H S+ +LGE GG V+ + L + +VAVK L + F+ E
Sbjct: 4 MTTPSH-LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 211 MILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKG 270
A L+H +V ++ + GE P L + + +Y G + ++G
Sbjct: 63 AQNAAALNHPAIVAVY----DTGEA-----ETPAGPLPYIVMEY--VDGVTLRDIVHTEG 111
Query: 271 ILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG- 329
+ + +I Q L + HQ +IHRD+K +N+++ K+ DFGIAR
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 330 -GDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSL 388
G+ + + ++GT Y+SPE A +SDV+S G +L E L+ + + DS+
Sbjct: 169 SGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSV 227
Query: 389 TLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQEN 434
A+ ++D + P+ ++E L + + AL EN
Sbjct: 228 -----AYQHVREDP----IPPSARHEGLSADLDAVVLKALAKNPEN 264
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 170 NKLGEGGFGPVYKGK-LLNGEEVAVKRLSN---KSGQGVEEFKNEMILIAKLHHRNLVRL 225
+ LG G FG V G+ L G +VAVK L+ +S V + K E+ + H ++++L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
+ + DFF+ +Y SG ++ G ++ R+ + I
Sbjct: 77 YQVI--------------STPTDFFMV-MEYVSGGELFDYICKHGRVEEMEARRLFQQIL 121
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
+ Y H++ V+HRDLK NVLLD MN KI+DFG++ M E + G+
Sbjct: 122 SAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPN 175
Query: 346 YMSPEYALHGLFS-IKSDVFSFGVLLLETL 374
Y +PE L++ + D++S GV+L L
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALL 205
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 33/221 (14%)
Query: 165 NFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNK-----SGQGVEEFKNEMILIAKLH 218
N+ LGEG FG V G++VA+K ++ K QG + E+ + L
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 62
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
H ++++L+ + E I++ EY N+ LFDY D +++ ++
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQR--DKMSEQEAR--------- 106
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIAR-MFGGDELQSNM 337
R + I + Y H++ +++HRDLK N+LLD +N KI+DFG++ M G+ L+++
Sbjct: 107 RFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS- 162
Query: 338 NRIVGTYGYMSPEYALHGLFS-IKSDVFSFGVLLLETLSSK 377
G+ Y +PE L++ + DV+S GV+L L +
Sbjct: 163 ---CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 35/238 (14%)
Query: 148 ESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKL-LNGEEVAVKRLSNKSGQGVEE 206
E WF+ F + LG GGFG V+ ++ G+ A K+L+ K + +
Sbjct: 184 EDWFLDFRV---------------LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 207 FKNEMI---LIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMV 263
++ M+ ++AK+H R +V L + + L+ M + + +++
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN---------- 278
Query: 264 TDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFG 323
D + G + + I GL +LHQ + +I+RDLK NVLLD D N +ISD G
Sbjct: 279 VDEDNPGFQE-PRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLG 334
Query: 324 IARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTR 381
+A Q+ GT G+M+PE L + D F+ GV L E ++++ R
Sbjct: 335 LAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 172 LGEGGFGPVYKGK---LLNGEE---VAVKRLSNKSG-QGVEEFKNEMILIAKL-HHRNLV 223
LG G FG V + L+ + VAVK L + E +E+ +++ L +H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L G C G ++I EY L FL K S T PA + + +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 284 ----IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
+A+G+ +L + IHRDL A N+LL KI DFG+AR +++++ N
Sbjct: 173 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-----DIKNDSNY 224
Query: 340 IVG-----TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS--------SKKNTRFYNID 386
+V +M+PE + +++ +SDV+S+G+ L E S +++FY +
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
Query: 387 SLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVS 446
+++L P +Y ++K C + RPT ++V
Sbjct: 285 K--------------EGFRMLSPEHAPAEMYDIMKT-------CWDADPLKRPTFKQIVQ 323
Query: 447 MIKNEI 452
+I+ +I
Sbjct: 324 LIEKQI 329
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 35/238 (14%)
Query: 148 ESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKL-LNGEEVAVKRLSNKSGQGVEE 206
E WF+ F + LG GGFG V+ ++ G+ A K+L+ K + +
Sbjct: 184 EDWFLDFRV---------------LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 207 FKNEMI---LIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMV 263
++ M+ ++AK+H R +V L + + L+ M + + +++
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN---------- 278
Query: 264 TDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFG 323
D + G + + I GL +LHQ + +I+RDLK NVLLD D N +ISD G
Sbjct: 279 VDEDNPGFQE-PRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLG 334
Query: 324 IARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTR 381
+A Q+ GT G+M+PE L + D F+ GV L E ++++ R
Sbjct: 335 LAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 26/230 (11%)
Query: 159 ISTATHNFSEENKLGE----GGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVE---EFKNE 210
++T +H S+ +LGE GG V+ + L + +VAVK L + F+ E
Sbjct: 4 MTTPSH-LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 211 MILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKG 270
A L+H +V ++ + GE P L + + +Y G + ++G
Sbjct: 63 AQNAAALNHPAIVAVY----DTGEA-----ETPAGPLPYIVMEY--VDGVTLRDIVHTEG 111
Query: 271 ILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG- 329
+ + +I Q L + HQ +IHRD+K +N+++ K+ DFGIAR
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 330 -GDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKK 378
G+ + + ++GT Y+SPE A +SDV+S G +L E L+ +
Sbjct: 169 SGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 22/205 (10%)
Query: 171 KLGEGGFGPV-YKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
K+GEG G V + G++VAVK++ + Q E NE++++ HH N+V ++
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ E ++ E++ +L TD + ++ + + + L
Sbjct: 112 LVGDELWVVMEFLEGGAL----------------TDIVTHTRMNEEQIATVCLSVLRALS 155
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
YLH VIHRD+K+ ++LL D K+SDFG + +VGT +M+P
Sbjct: 156 YLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKXLVGTPYWMAP 210
Query: 350 EYALHGLFSIKSDVFSFGVLLLETL 374
E + + D++S G++++E +
Sbjct: 211 EVISRLPYGTEVDIWSLGIMVIEMI 235
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 170 NKLGEGGFGPVYKGK-LLNGEEVAVKRLSN---KSGQGVEEFKNEMILIAKLHHRNLVRL 225
+ LG G FG V G+ L G +VAVK L+ +S V + K E+ + H ++++L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
+ + DFF+ +Y SG ++ G ++ R+ + I
Sbjct: 77 YQVI--------------STPTDFFMV-MEYVSGGELFDYICKHGRVEEMEARRLFQQIL 121
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
+ Y H++ V+HRDLK NVLLD MN KI+DFG++ M E + G+
Sbjct: 122 SAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRDSCGSPN 175
Query: 346 YMSPEYALHGLFS-IKSDVFSFGVLLLETL 374
Y +PE L++ + D++S GV+L L
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALL 205
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 35/238 (14%)
Query: 148 ESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKL-LNGEEVAVKRLSNKSGQGVEE 206
E WF+ F + LG GGFG V+ ++ G+ A K+L+ K + +
Sbjct: 184 EDWFLDFRV---------------LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 207 FKNEMI---LIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMV 263
++ M+ ++AK+H R +V L + + L+ M + + +++
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN---------- 278
Query: 264 TDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFG 323
D + G + + I GL +LHQ + +I+RDLK NVLLD D N +ISD G
Sbjct: 279 VDEDNPGFQE-PRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLG 334
Query: 324 IARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTR 381
+A Q+ GT G+M+PE L + D F+ GV L E ++++ R
Sbjct: 335 LAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVY------KGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
K+GEG FG G+ +E+ + R+S+K EE + E+ ++A + H N+V
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER---EESRREVAVLANMKHPNIV 86
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ E G ++ +Y L F + A KG+L + I++
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDL------------FKRIN--AQKGVLFQEDQ--ILDW 130
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD-ELQSNMNRIVG 342
Q L L +++HRD+K+ N+ L D ++ DFGIAR+ EL +G
Sbjct: 131 FVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL---ARACIG 187
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
T Y+SPE + ++ KSD+++ G +L E + K
Sbjct: 188 TPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 28/224 (12%)
Query: 152 IFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEV--AVKRLSNKSGQGVEEFKN 209
++F ++ ++ EN +G G +G V K + G + A K++ + V+ FK
Sbjct: 14 LYFQGSTKGDINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ 72
Query: 210 EMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASK 269
E+ ++ L H N++RL+ + + L+ E +G ++ K
Sbjct: 73 EIEIMKSLDHPNIIRLYETFEDNTDIYLVME---------------LCTGGELFERVVHK 117
Query: 270 GILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL--DGDMNP-KISDFGIAR 326
+ + RI++ + + Y H +L V HRDLK N L D +P K+ DFG+A
Sbjct: 118 RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 174
Query: 327 MFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLL 370
F ++ M VGT Y+SP+ L GL+ + D +S GV++
Sbjct: 175 RFKPGKM---MRTKVGTPYYVSPQ-VLEGLYGPECDEWSAGVMM 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 33/221 (14%)
Query: 165 NFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNK-----SGQGVEEFKNEMILIAKLH 218
N+ LGEG FG V G++VA+K ++ K QG + E+ + L
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 66
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
H ++++L+ + E I++ EY N+ LFDY D +++ ++
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQR--DKMSEQEAR--------- 110
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIAR-MFGGDELQSNM 337
R + I + Y H++ +++HRDLK N+LLD +N KI+DFG++ M G+ L+++
Sbjct: 111 RFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS- 166
Query: 338 NRIVGTYGYMSPEYALHGLFS-IKSDVFSFGVLLLETLSSK 377
G+ Y +PE L++ + DV+S GV+L L +
Sbjct: 167 ---CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 73
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ EK+ F Y+ +++ G D T I
Sbjct: 74 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 119
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y+
Sbjct: 120 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLS 375
SPE SD+++ G ++ + ++
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVA 204
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 76
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ EK+ F Y+ +++ G D T I
Sbjct: 77 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 122
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y+
Sbjct: 123 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLS 375
SPE SD+++ G ++ + ++
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVA 207
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 107/213 (50%), Gaps = 35/213 (16%)
Query: 172 LGE-GGFGPVYKGKLLNGEE---VAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFG 227
+GE G FG VYK + N E A K + KS + +E++ E+ ++A H N+V+L
Sbjct: 17 IGELGDFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII-EGIAQ 286
+ ++ E+ ++D + + + P ++ ++++++ +
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELER---------PLTE------SQIQVVCKQTLD 119
Query: 287 GLLYLHQYSRLRVIHRDLKASNVL--LDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
L YLH ++IHRDLKA N+L LDGD+ K++DFG++ +Q + +GT
Sbjct: 120 ALNYLHDN---KIIHRDLKAGNILFTLDGDI--KLADFGVSAKNTRTXIQRR-DSFIGTP 173
Query: 345 GYMSPEYAL-----HGLFSIKSDVFSFGVLLLE 372
+M+PE + + K+DV+S G+ L+E
Sbjct: 174 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 75
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ EK+ F Y+ +++ G D T I
Sbjct: 76 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 121
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y+
Sbjct: 122 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLS 375
SPE SD+++ G ++ + ++
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVA 206
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 39/217 (17%)
Query: 171 KLGEGGFGPVYKGKLLNGE-EVAVKRL------------SNKSGQGV-EEFKNEMILIAK 216
KLG G +G V K NG E A+K + NK+ + EE NE+ L+
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 217 LHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
L H N+++LF ++ +F ++ G ++ ++ D
Sbjct: 103 LDHPNIIKLFDVFEDKK---------------YFYLVTEFYEGGELFEQIINRHKFDECD 147
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGD---MNPKISDFGIARMFGGDEL 333
I++ I G+ YLH+++ ++HRD+K N+LL+ +N KI DFG++ F D
Sbjct: 148 AANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD-- 202
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLL 370
+ +GT Y++PE L ++ K DV+S GV++
Sbjct: 203 -YKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIM 237
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 74
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ EK+ F Y+ +++ G D T I
Sbjct: 75 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 120
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y+
Sbjct: 121 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLS 375
SPE SD+++ G ++ + ++
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVA 205
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT-TRVRIIEGIAQ 286
+ EK+ F Y+ +++ G D T TR E I
Sbjct: 97 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVS 141
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+SPE SD+++ G ++ + ++
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNK--SGQGVEEFKNEMILIAKLHHRNLVRLFGC 228
+G+G F V + KL G E A K ++ K S + ++ + E + L H N+VRL
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
E+G L+++ + +G ++ D ++ I+ I + +
Sbjct: 72 ISEEGFHYLVFDLV---------------TGGELFEDIVAREYYSEADASHCIQQILEAV 116
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDGDMN---PKISDFGIARMFGGDELQSNMNRIVGTYG 345
L+ HQ + V+HRDLK N+LL K++DFG+A GD Q GT G
Sbjct: 117 LHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD--QQAWFGFAGTPG 171
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLL 370
Y+SPE + D+++ GV+L
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVIL 196
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT-TRVRIIEGIAQ 286
+ EK+ F Y+ +++ G D T TR E I
Sbjct: 99 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVS 143
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+SPE SD+++ G ++ + ++
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 99
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT-TRVRIIEGIAQ 286
+ EK+ F Y+ +++ G D T TR E I
Sbjct: 100 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVS 144
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+SPE SD+++ G ++ + ++
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 95
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ EK+ F Y+ +++ G D T I
Sbjct: 96 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 141
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y+
Sbjct: 142 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 198
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLS 375
SPE SD+++ G ++ + ++
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT-TRVRIIEGIAQ 286
+ EK+ F Y+ +++ G D T TR E I
Sbjct: 97 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVS 141
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+SPE SD+++ G ++ + ++
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 99
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT-TRVRIIEGIAQ 286
+ EK+ F Y+ +++ G D T TR E I
Sbjct: 100 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVS 144
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+SPE SD+++ G ++ + ++
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT-TRVRIIEGIAQ 286
+ EK+ F Y+ +++ G D T TR E I
Sbjct: 99 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVS 143
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+SPE SD+++ G ++ + ++
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT-TRVRIIEGIAQ 286
+ EK+ F Y+ +++ G D T TR E I
Sbjct: 99 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVS 143
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+SPE SD+++ G ++ + ++
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 80
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ EK+ F Y+ +++ G D T I
Sbjct: 81 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 126
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y+
Sbjct: 127 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 183
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLS 375
SPE SD+++ G ++ + ++
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVA 211
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT-TRVRIIEGIAQ 286
+ EK+ F Y+ ++ G D T TR E I
Sbjct: 99 FTFQDDEKLY--------------FGLSYAKNGCLLKYIRKIGSFDETCTRFYTAE-IVS 143
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+SPE S SD+++ G ++ + ++
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVA 229
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT-TRVRIIEGIAQ 286
+ EK+ F Y+ +++ G D T TR E I
Sbjct: 97 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVS 141
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+SPE SD+++ G ++ + ++
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT-TRVRIIEGIAQ 286
+ EK+ F Y+ +++ G D T TR E I
Sbjct: 99 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVS 143
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+SPE SD+++ G ++ + ++
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT-TRVRIIEGIAQ 286
+ EK+ F Y+ +++ G D T TR E I
Sbjct: 99 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVS 143
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+SPE SD+++ G ++ + ++
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVA 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 95
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ EK+ F Y+ +++ G D T I
Sbjct: 96 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 141
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y+
Sbjct: 142 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 198
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLS 375
SPE SD+++ G ++ + ++
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V + L E A+K L + V E ++++L H V+L+
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 101
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT-TRVRIIEGIAQ 286
+ EK+ F Y+ +++ G D T TR E I
Sbjct: 102 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVS 146
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y
Sbjct: 147 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+SPE SD+++ G ++ + ++
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVA 232
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 28/210 (13%)
Query: 166 FSEENKLGEGGFGPVYKGKLLNGEEV--AVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
++ EN +G G +G V K + G + A K++ + V+ FK E+ ++ L H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
RL+ + + L+ E +G ++ K + + RI++
Sbjct: 70 RLYETFEDNTDIYLVME---------------LCTGGELFERVVHKRVFRESDAARIMKD 114
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLL--DGDMNP-KISDFGIARMFGGDELQSNMNRI 340
+ + Y H +L V HRDLK N L D +P K+ DFG+A F ++ M
Sbjct: 115 VLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM---MRTK 168
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLL 370
VGT Y+SP+ L GL+ + D +S GV++
Sbjct: 169 VGTPYYVSPQ-VLEGLYGPECDEWSAGVMM 197
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 172 LGEGGFGP-VYKGKLLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
LGEG F V +L E A+K L + V E ++++L H V+L+
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT-TRVRIIEGIAQ 286
+ EK+ F Y+ +++ G D T TR E I
Sbjct: 97 FTFQDDEKLY--------------FGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVS 141
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YLH +IHRDLK N+LL+ DM+ +I+DFG A++ + Q+ N VGT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+SPE SD+++ G ++ + ++
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 99/220 (45%), Gaps = 35/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRL--SNKSGQGVEEFKNEMILIAKLHHRN 221
N+ +G+G F V + +L G+EVAVK + + + +++ E+ + L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+V+LF + L+ EY + FDY + G + +K
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEV----FDYLVAHGRXKEKEARAK-----------F 119
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIV 341
I + Y HQ ++HRDLKA N+LLD D N KI+DFG + F + ++
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF---TFGNKLDAFC 173
Query: 342 GTYGYMSPEYALHGLFSIKS------DVFSFGVLLLETLS 375
G Y +PE LF K DV+S GV+L +S
Sbjct: 174 GAPPYAAPE-----LFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 15/222 (6%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKLHHRNL 222
+F LG GGFG V++ K ++ A+KR+ + + E+ E+ +AKL H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VR F +E+ + P L + + + D + + + + + I
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM----- 337
IA+ + +LH ++HRDLK SN+ D K+ DFG+ DE + +
Sbjct: 126 QIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 338 -----NRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
VGT YMSPE +S K D+FS G++L E L
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 159 ISTATHNFSEENKLGE----GGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVE---EFKNE 210
++T +H S+ +LGE GG V+ + L +VAVK L + F+ E
Sbjct: 4 MTTPSH-LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 211 MILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKG 270
A L+H +V ++ + GE P L + + +Y G + ++G
Sbjct: 63 AQNAAALNHPAIVAVY----DTGEA-----ETPAGPLPYIVMEY--VDGVTLRDIVHTEG 111
Query: 271 ILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG- 329
+ + +I Q L + HQ +IHRD+K +N+++ K+ DFGIAR
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 330 -GDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKK 378
G+ + + ++GT Y+SPE A +SDV+S G +L E L+ +
Sbjct: 169 SGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 26/230 (11%)
Query: 159 ISTATHNFSEENKLGE----GGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVE---EFKNE 210
++T +H S+ +LGE GG V+ + L +VAVK L + F+ E
Sbjct: 4 MTTPSH-LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 211 MILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKG 270
A L+H +V ++ GE P L + + +Y G + ++G
Sbjct: 63 AQNAAALNHPAIVAVYAT----GEA-----ETPAGPLPYIVMEY--VDGVTLRDIVHTEG 111
Query: 271 ILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG- 329
+ + +I Q L + HQ +IHRD+K +N+++ K+ DFGIAR
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 330 -GDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKK 378
G+ + + ++GT Y+SPE A +SDV+S G +L E L+ +
Sbjct: 169 SGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVYKGK-LLNGEEVAVK--RLSN-KSGQGVEEFKNEMIL--IA 215
AT + ++G G +G VYK + +G VA+K R+ N + G + + +L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 216 KLHHRNLVRLFGCCI-----EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKG 270
H N+VRL C + + L++E++ ++ L +L D A
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-------------DKAPPP 107
Query: 271 ILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGG 330
L T ++ +GL +LH ++HRDLK N+L+ K++DFG+AR++
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS- 163
Query: 331 DELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKK 378
Q ++ +V T Y +PE L ++ D++S G + E K
Sbjct: 164 --YQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 32/225 (14%)
Query: 156 LASISTATHNFSEE----NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNK--SGQGVEEFK 208
+A+I+ F+EE +LG+G F V + K+L G+E A ++ K S + ++ +
Sbjct: 1 MATITCT--RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE 58
Query: 209 NEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPAS 268
E + L H N+VRL E+G LI++ + +G ++ D +
Sbjct: 59 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLV---------------TGGELFEDIVA 103
Query: 269 KGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN---PKISDFGIA 325
+ I+ I + +L+ HQ + V+HR+LK N+LL + K++DFG+A
Sbjct: 104 REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
Query: 326 RMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLL 370
G+ Q GT GY+SPE + D+++ GV+L
Sbjct: 161 IEVEGE--QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 156 LASISTATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKN 209
L S A +F LG+G FG VY + K + +V K K+G VE + +
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRR 60
Query: 210 EMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASK 269
E+ + + L H N++RL+G + LI EY P L + + S FD
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-------- 109
Query: 270 GILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG 329
+ T I E +A L Y H RVIHRD+K N+LL KI+DFG +
Sbjct: 110 ---EQRTATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WS 158
Query: 330 GDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
S + + GT Y+ PE + K D++S GVL E L K
Sbjct: 159 VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 108/247 (43%), Gaps = 37/247 (14%)
Query: 137 EGDSAAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVY-----KGKLLNGEEV 191
E + A+K K++ES A +F LG+G FG VY + K + +V
Sbjct: 14 EEELASKQKNEES-------KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKV 66
Query: 192 AVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF 250
K K+G VE + + E+ + + L H N++RL+G + LI EY P L
Sbjct: 67 LFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTV 121
Query: 251 LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVL 310
+ + S FD + T I E +A L Y H RVIHRD+K N+L
Sbjct: 122 YRELQKLSKFD-----------EQRTATYITE-LANALSYCHSK---RVIHRDIKPENLL 166
Query: 311 LDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLL 370
L KI+DFG + S + + GT Y+ PE + K D++S GVL
Sbjct: 167 LGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLC 222
Query: 371 LETLSSK 377
E L K
Sbjct: 223 YEFLVGK 229
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 64
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 110
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 111 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 162
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ + GT Y+ PE + K D++S GVL E L K
Sbjct: 163 RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 159 ISTATHNFSEENKLGE----GGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVE---EFKNE 210
++T +H S+ +LGE GG V+ + L +VAVK L + F+ E
Sbjct: 21 MTTPSH-LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 79
Query: 211 MILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKG 270
A L+H +V ++ + GE P L + + +Y G + ++G
Sbjct: 80 AQNAAALNHPAIVAVY----DTGEA-----ETPAGPLPYIVMEY--VDGVTLRDIVHTEG 128
Query: 271 ILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG- 329
+ + +I Q L + HQ +IHRD+K +N+++ K+ DFGIAR
Sbjct: 129 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 185
Query: 330 -GDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKK 378
G+ + + ++GT Y+SPE A +SDV+S G +L E L+ +
Sbjct: 186 SGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEE----VAVKRLSNKSGQGV-EEFKNEMILIAKLHHRNLVRLF 226
+GEG FG V++G ++ E VA+K N + V E+F E + + + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G I + +I E L FL KYS LD + + ++
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKYS--------------LDLASLILYAYQLST 122
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YL R +HRD+ A NVL+ + K+ DFG++R + D ++ +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 178
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETL 374
M+PE F+ SDV+ FGV + E L
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEE----VAVKRLSNKSGQGV-EEFKNEMILIAKLHHRNLVRLF 226
+GEG FG V++G ++ E VA+K N + V E+F E + + + H ++V+L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G I + +I E L FL KYS LD + + ++
Sbjct: 80 GV-ITENPVWIIMELCTLGELRSFLQVRKYS--------------LDLASLILYAYQLST 124
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YL R +HRD+ A NVL+ + K+ DFG++R + D ++ +
Sbjct: 125 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 180
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETL 374
M+PE F+ SDV+ FGV + E L
Sbjct: 181 MAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 63
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 109
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 110 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 161
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 162 RRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 68
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 114
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 115 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 166
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 167 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 30/211 (14%)
Query: 166 FSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLV 223
F + LG G F V + G+ AVK + K+ +G E +NE+ ++ K+ H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSG--FDMVTDPASKGILDWTTRVRII 281
L IYE PN +L S G FD + + KG +I
Sbjct: 84 ALED----------IYE-SPNH---LYLVMQLVSGGELFDRIVE---KGFYTEKDASTLI 126
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLL---DGDMNPKISDFGIARMFGGDELQSNMN 338
+ + YLH R+ ++HRDLK N+L D + ISDFG+++M G ++ M+
Sbjct: 127 RQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV---MS 180
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVL 369
GT GY++PE +S D +S GV+
Sbjct: 181 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEE----VAVKRLSNKSGQGV-EEFKNEMILIAKLHHRNLVRLF 226
+GEG FG V++G ++ E VA+K N + V E+F E + + + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G I + +I E L FL KYS LD + + ++
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKYS--------------LDLASLILYAYQLST 122
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YL R +HRD+ A NVL+ + K+ DFG++R + D ++ +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 178
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETL 374
M+PE F+ SDV+ FGV + E L
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 172 LGEGGFGPVYKGKLLNGEE-VAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVRLFGCC 229
LG G F V + ++ VA+K ++ K+ +G E +NE+ ++ K+ H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
G LI + + L FD GF D + R+I + +
Sbjct: 86 ESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDAS-----------RLIFQVLDAVK 130
Query: 290 YLHQYSRLRVIHRDLKASNVL---LDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
YLH L ++HRDLK N+L LD D ISDFG+++M ++ S ++ GT GY
Sbjct: 131 YLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGY 184
Query: 347 MSPEYALHGLFSIKSDVFSFGVL 369
++PE +S D +S GV+
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEE----VAVKRLSNKSGQGV-EEFKNEMILIAKLHHRNLVRLF 226
+GEG FG V++G ++ E VA+K N + V E+F E + + + H ++V+L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G I + +I E L FL KYS LD + + ++
Sbjct: 106 GV-ITENPVWIIMELCTLGELRSFLQVRKYS--------------LDLASLILYAYQLST 150
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YL R +HRD+ A NVL+ + K+ DFG++R + D ++ +
Sbjct: 151 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 206
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETL 374
M+PE F+ SDV+ FGV + E L
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEE----VAVKRLSNKSGQGV-EEFKNEMILIAKLHHRNLVRLF 226
+GEG FG V++G ++ E VA+K N + V E+F E + + + H ++V+L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G I + +I E L FL KYS LD + + ++
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFLQVRKYS--------------LDLASLILYAYQLST 127
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YL R +HRD+ A NVL+ + K+ DFG++R + D ++ +
Sbjct: 128 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 183
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETL 374
M+PE F+ SDV+ FGV + E L
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 66
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 112
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 113 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 164
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 89
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 135
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 136 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 187
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 188 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 107/247 (43%), Gaps = 37/247 (14%)
Query: 137 EGDSAAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVY-----KGKLLNGEEV 191
E + A+K K++ES A +F LG+G FG VY + K + +V
Sbjct: 5 EEELASKQKNEES-------KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKV 57
Query: 192 AVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF 250
K K+G VE + + E+ + + L H N++RL+G + LI EY P L
Sbjct: 58 LFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTV 112
Query: 251 LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVL 310
+ + S FD + T I E +A L Y H RVIHRD+K N+L
Sbjct: 113 YRELQKLSKFD-----------EQRTATYITE-LANALSYCHSK---RVIHRDIKPENLL 157
Query: 311 LDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLL 370
L KI+DFG + S + GT Y+ PE + K D++S GVL
Sbjct: 158 LGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLC 213
Query: 371 LETLSSK 377
E L K
Sbjct: 214 YEFLVGK 220
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 155 SLASISTATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFK 208
++ S A +F LG+G FG VY + K + +V K K+G VE + +
Sbjct: 2 AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLR 59
Query: 209 NEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPAS 268
E+ + + L H N++RL+G + LI EY P L + + S FD
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD------- 109
Query: 269 KGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF 328
+ T I E +A L Y H RVIHRD+K N+LL KI+DFG +
Sbjct: 110 ----EQRTATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----W 157
Query: 329 GGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
S + GT Y+ PE + K D++S GVL E L K
Sbjct: 158 SVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEE----VAVKRLSNKSGQGV-EEFKNEMILIAKLHHRNLVRLF 226
+GEG FG V++G ++ E VA+K N + V E+F E + + + H ++V+L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G I + +I E L FL KYS LD + + ++
Sbjct: 81 GV-ITENPVWIIMELCTLGELRSFLQVRKYS--------------LDLASLILYAYQLST 125
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YL R +HRD+ A NVL+ + K+ DFG++R + D ++ +
Sbjct: 126 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 181
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETL 374
M+PE F+ SDV+ FGV + E L
Sbjct: 182 MAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 63
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 109
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 110 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 161
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 162 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 171 KLGEGGFGPVYKG--KLLNGE-EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+LG G FG V +G ++ + +VA+K L + + EE E ++ +L + +VRL
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 227 GCCIEQGEKI-LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C Q E + L+ E L FL + V + ++ ++
Sbjct: 77 GVC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAE--------------LLHQVS 120
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
G+ YL + + +HRDL A NVLL KISDFG+++ G D+ R G +
Sbjct: 121 MGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWP 176
Query: 346 --YMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+ +PE FS +SDV+S+GV + E LS
Sbjct: 177 LKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 25/227 (11%)
Query: 165 NFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
+F E LG+G FG V K + L+ A+K++ + + + + +E+ L+A L+H+ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVXLLASLNHQYVV 65
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDY-KYSSGFDMVTDPASKGILD--WTTRVRI 280
R + +E+ + + KS F +Y + + +D++ D W R+
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RL 121
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIA----RMFGGDELQS- 335
I + L Y+H +IHR+LK N+ +D N KI DFG+A R +L S
Sbjct: 122 FRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 336 -------NMNRIVGTYGYMSPEYAL-HGLFSIKSDVFSFGVLLLETL 374
N+ +GT Y++ E G ++ K D +S G++ E +
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEE----VAVKRLSNKSGQGV-EEFKNEMILIAKLHHRNLVRLF 226
+GEG FG V++G ++ E VA+K N + V E+F E + + + H ++V+L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G I + +I E L FL KYS LD + + ++
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFLQVRKYS--------------LDLASLILYAYQLST 119
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YL R +HRD+ A NVL+ + K+ DFG++R + D ++ +
Sbjct: 120 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 175
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETL 374
M+PE F+ SDV+ FGV + E L
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEE----VAVKRLSNKSGQGV-EEFKNEMILIAKLHHRNLVRLF 226
+GEG FG V++G ++ E VA+K N + V E+F E + + + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G I + +I E L FL K+S LD + + ++
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKFS--------------LDLASLILYAYQLST 122
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YL R +HRD+ A NVL+ + K+ DFG++R + D ++ +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKW 178
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETL 374
M+PE F+ SDV+ FGV + E L
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFKN--EMILIAKLH 218
AT + ++G G +G VYK + +G VA+K + +G+ E+ L+ +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 219 ---HRNLVRLFGCCI-----EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKG 270
H N+VRL C + + L++E++ ++ L +L D A
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-------------DKAPPP 107
Query: 271 ILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGG 330
L T ++ +GL +LH ++HRDLK N+L+ K++DFG+AR++
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS- 163
Query: 331 DELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKK 378
Q + +V T Y +PE L ++ D++S G + E K
Sbjct: 164 --YQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 63
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 109
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 110 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 161
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 162 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 64
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 110
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 111 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 162
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 63
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 109
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 110 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 161
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 162 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 68
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 114
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 115 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 166
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 167 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 64
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 110
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 111 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSS 162
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 163 RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 62
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 108
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 109 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 160
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 161 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 65
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 111
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 112 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 163
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 164 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 66
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 112
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 113 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 164
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 63
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 109
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 110 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 161
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 162 RRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 169 ENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNK-SGQGVEEFKNEMILIAKLHHRNLVRLF 226
+ +LG GGFG V + + GE+VA+K+ + S + E + E+ ++ KL+H N+V
Sbjct: 20 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 79
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTD----PASKGILDWTTRVRIIE 282
+ G + + PN D L +Y G D+ G+ + R ++
Sbjct: 80 E--VPDG----LQKLAPN---DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-LLS 129
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDG---DMNPKISDFGIARMFGGDELQSNMNR 339
I+ L YLH+ R+IHRDLK N++L + KI D G A+ EL
Sbjct: 130 DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTE 183
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
VGT Y++PE +++ D +SFG L E ++
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 219
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 169 ENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNK-SGQGVEEFKNEMILIAKLHHRNLVRLF 226
+ +LG GGFG V + + GE+VA+K+ + S + E + E+ ++ KL+H N+V
Sbjct: 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTD----PASKGILDWTTRVRIIE 282
+ G + + PN D L +Y G D+ G+ + R ++
Sbjct: 79 E--VPDG----LQKLAPN---DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-LLS 128
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDG---DMNPKISDFGIARMFGGDELQSNMNR 339
I+ L YLH+ R+IHRDLK N++L + KI D G A+ EL
Sbjct: 129 DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTE 182
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
VGT Y++PE +++ D +SFG L E ++
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 218
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 67
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 113
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 114 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 165
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 166 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 37/277 (13%)
Query: 171 KLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
K+GEG G V + + G+ VAVK++ + Q E NE++++ H N+V ++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ E ++ E++ +L TD + ++ + + Q L
Sbjct: 98 LVGDELWVVMEFLEGGAL----------------TDIVTHTRMNEEQIAAVCLAVLQALS 141
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
LH VIHRD+K+ ++LL D K+SDFG + +VGT +M+P
Sbjct: 142 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 196
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDP 409
E + + D++S G++++E + + ++N L A + +D+ L P
Sbjct: 197 ELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPLK----AMKMIRDN-----LPP 245
Query: 410 TLQN-EALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
L+N + P +K ++ L+ + A R T +E++
Sbjct: 246 RLKNLHKVSPSLKGFLDRLLV---RDPAQRATAAELL 279
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 68
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P + + + S FD +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEV---YKELQKLSKFD-----------EQR 114
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 115 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 166
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 167 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 37/277 (13%)
Query: 171 KLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
K+GEG G V + + G+ VAVK++ + Q E NE++++ H N+V ++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ E ++ E++ +L TD + ++ + + Q L
Sbjct: 87 LVGDELWVVMEFLEGGAL----------------TDIVTHTRMNEEQIAAVCLAVLQALS 130
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
LH VIHRD+K+ ++LL D K+SDFG + +VGT +M+P
Sbjct: 131 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 185
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDP 409
E + + D++S G++++E + + ++N L A + +D+ L P
Sbjct: 186 ELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPLK----AMKMIRDN-----LPP 234
Query: 410 TLQN-EALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
L+N + P +K ++ L+ + A R T +E++
Sbjct: 235 RLKNLHKVSPSLKGFLDRLLV---RDPAQRATAAELL 268
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 37/277 (13%)
Query: 171 KLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
K+GEG G V + + G+ VAVK++ + Q E NE++++ H N+V ++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ E ++ E++ +L TD + ++ + + Q L
Sbjct: 96 LVGDELWVVMEFLEGGAL----------------TDIVTHTRMNEEQIAAVCLAVLQALS 139
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
LH VIHRD+K+ ++LL D K+SDFG + +VGT +M+P
Sbjct: 140 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 194
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDP 409
E + + D++S G++++E + + ++N L A + +D+ L P
Sbjct: 195 ELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPLK----AMKMIRDN-----LPP 243
Query: 410 TLQN-EALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
L+N + P +K ++ L+ + A R T +E++
Sbjct: 244 RLKNLHKVSPSLKGFLDRLLV---RDPAQRATAAELL 277
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 37/277 (13%)
Query: 171 KLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
K+GEG G V + + G+ VAVK++ + Q E NE++++ H N+V ++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ E ++ E++ +L TD + ++ + + Q L
Sbjct: 91 LVGDELWVVMEFLEGGAL----------------TDIVTHTRMNEEQIAAVCLAVLQALS 134
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
LH VIHRD+K+ ++LL D K+SDFG + +VGT +M+P
Sbjct: 135 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 189
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDP 409
E + + D++S G++++E + + ++N L A + +D+ L P
Sbjct: 190 ELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPLK----AMKMIRDN-----LPP 238
Query: 410 TLQN-EALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
L+N + P +K ++ L+ + A R T +E++
Sbjct: 239 RLKNLHKVSPSLKGFLDRLLV---RDPAQRATAAELL 272
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 66
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 112
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 113 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 164
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 165 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVYKGK-LLNGEEVAVK--RLSN-KSGQGVEEFKNEMIL--IA 215
AT + ++G G +G VYK + +G VA+K R+ N + G + + +L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 216 KLHHRNLVRLFGCCI-----EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKG 270
H N+VRL C + + L++E++ ++ L +L D A
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-------------DKAPPP 107
Query: 271 ILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGG 330
L T ++ +GL +LH ++HRDLK N+L+ K++DFG+AR++
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS- 163
Query: 331 DELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKK 378
Q + +V T Y +PE L ++ D++S G + E K
Sbjct: 164 --YQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 47/304 (15%)
Query: 159 ISTATH-NFSEEN-----KLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKNEM 211
IS H +F+ E+ ++G G +G V K +G+ +AVKR+ + E+ + ++
Sbjct: 11 ISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---EKEQKQL 67
Query: 212 ILIAKLHHRN-----LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDP 266
++ + R+ +V+ +G +G+ + E M + S D F YKY + ++ D
Sbjct: 68 LMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKF---YKYV--YSVLDDV 121
Query: 267 ASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIAR 326
+ IL +I + L +L + L++IHRD+K SN+LLD N K+ DFGI+
Sbjct: 122 IPEEILG-----KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGIS- 173
Query: 327 MFGGDELQS-NMNRIVGTYGYMSPEY----ALHGLFSIKSDVFSFGVLLLETLSSKKNTR 381
G + S R G YM+PE A + ++SDV+S G+ L E + +
Sbjct: 174 ---GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP 230
Query: 382 FYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTM 441
+N ++ + K D P L N +I LC+ ++ + RP
Sbjct: 231 KWN----SVFDQLTQVVKGD------PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKY 280
Query: 442 SEVV 445
E++
Sbjct: 281 KELL 284
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 63
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 109
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 110 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 161
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 162 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 172 LGEGGFGPVYKGKLLNGEE-VAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVRLFGCC 229
LG G F V + ++ VA+K ++ ++ +G E +NE+ ++ K+ H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
G LI + + L FD GF D + R+I + +
Sbjct: 86 ESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDAS-----------RLIFQVLDAVK 130
Query: 290 YLHQYSRLRVIHRDLKASNVL---LDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
YLH L ++HRDLK N+L LD D ISDFG+++M ++ S ++ GT GY
Sbjct: 131 YLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGY 184
Query: 347 MSPEYALHGLFSIKSDVFSFGVL 369
++PE +S D +S GV+
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 34/233 (14%)
Query: 160 STATHNFSEENKLGEGGFGPVYKGK-LLNGEEVAVK--RLSNKSGQGVE---EFKNEMIL 213
S AT + ++G G +G VYK + +G VA+K R+ N G G E+ L
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 214 IAKLH---HRNLVRLFGCCI-----EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTD 265
+ +L H N+VRL C + + L++E++ ++ L +L D
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-------------D 110
Query: 266 PASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIA 325
A L T ++ +GL +LH ++HRDLK N+L+ K++DFG+A
Sbjct: 111 KAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 167
Query: 326 RMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKK 378
R++ Q + +V T Y +PE L ++ D++S G + E K
Sbjct: 168 RIYS---YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 172 LGEGGFGPVYKGKLLNGEE-VAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVRLFGCC 229
LG G F V + ++ VA+K ++ ++ +G E +NE+ ++ K+ H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
G LI + + L FD GF D + R+I + +
Sbjct: 86 ESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDAS-----------RLIFQVLDAVK 130
Query: 290 YLHQYSRLRVIHRDLKASNVL---LDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
YLH L ++HRDLK N+L LD D ISDFG+++M ++ S ++ GT GY
Sbjct: 131 YLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGY 184
Query: 347 MSPEYALHGLFSIKSDVFSFGVL 369
++PE +S D +S GV+
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 63
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 109
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 110 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 161
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 162 RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 34/246 (13%)
Query: 158 SISTATHNFSEENKLGEGGFGPVY------KGKLLNGEEVAVKRLSNKSGQGVEEFKNEM 211
+I ++FS +G GGFG VY GK+ + + KR+ K G+ + NE
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA--LNER 240
Query: 212 ILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGI 271
I+++ + + F C+ Y + L F L +G D+ + G+
Sbjct: 241 IMLSLVSTGDCP--FIVCMS-------YAFHTPDKLSFIL---DLMNGGDLHYHLSQHGV 288
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
I GL ++H +R V++RDLK +N+LLD + +ISD G+A F
Sbjct: 289 FSEADMRFYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL------SSKKNTRFYN 384
+ ++ VGT+GYM+PE G+ + +D FS G +L + L K +
Sbjct: 346 KPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE 401
Query: 385 IDSLTL 390
ID +TL
Sbjct: 402 IDRMTL 407
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 34/246 (13%)
Query: 158 SISTATHNFSEENKLGEGGFGPVY------KGKLLNGEEVAVKRLSNKSGQGVEEFKNEM 211
+I ++FS +G GGFG VY GK+ + + KR+ K G+ + NE
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA--LNER 240
Query: 212 ILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGI 271
I+++ + + F C+ Y + L F L +G D+ + G+
Sbjct: 241 IMLSLVSTGDCP--FIVCMS-------YAFHTPDKLSFIL---DLMNGGDLHYHLSQHGV 288
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
I GL ++H +R V++RDLK +N+LLD + +ISD G+A F
Sbjct: 289 FSEADMRFYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL------SSKKNTRFYN 384
+ ++ VGT+GYM+PE G+ + +D FS G +L + L K +
Sbjct: 346 KPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE 401
Query: 385 IDSLTL 390
ID +TL
Sbjct: 402 IDRMTL 407
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 162 ATHNFSEENKLGEGGFGPVYKGKLLNGEEV-AVKRL--SNKSGQGVE-EFKNEMILIAKL 217
A +F LG+G FG VY + N + + A+K L + GVE + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 218 HHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTR 277
H N++RL+G + LI EY P L + + S FD + T
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFD-----------EQRTA 111
Query: 278 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM 337
I E +A L Y H +VIHRD+K N+LL KI+DFG + S
Sbjct: 112 TYITE-LANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRR 163
Query: 338 NRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 164 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 68
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P + + + S FD +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEV---YKELQKLSKFD-----------EQR 114
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 115 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 166
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 167 RRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 30/212 (14%)
Query: 171 KLGEGGFGPVY--KGKLLNGEE-VAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFG 227
KLG G +G V + K+ + E + + R ++ S + E+ ++ L H N+++L
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL-- 101
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFD-YKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
Y++ +K + + + YK FD + +D II+ +
Sbjct: 102 -----------YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLS 147
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDG---DMNPKISDFGIARMFGGDELQSNMNRIVGT 343
G+ YLH+++ ++HRDLK N+LL+ D KI DFG++ +F E Q M +GT
Sbjct: 148 GVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGT 201
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
Y++PE L + K DV+S GV+L L+
Sbjct: 202 AYYIAPE-VLRKKYDEKCDVWSIGVILFILLA 232
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 37/277 (13%)
Query: 171 KLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
K+GEG G V + + G+ VAVK++ + Q E NE++++ H N+V ++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ E ++ E++ +L TD + ++ + + Q L
Sbjct: 218 LVGDELWVVMEFLEGGAL----------------TDIVTHTRMNEEQIAAVCLAVLQALS 261
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
LH VIHRD+K+ ++LL D K+SDFG + +VGT +M+P
Sbjct: 262 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 316
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDP 409
E + + D++S G++++E + + ++N L A + +D+ L P
Sbjct: 317 ELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPLK----AMKMIRDN-----LPP 365
Query: 410 TLQN-EALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
L+N + P +K ++ L+ + A R T +E++
Sbjct: 366 RLKNLHKVSPSLKGFLDRLLV---RDPAQRATAAELL 399
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 37/277 (13%)
Query: 171 KLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
K+GEG G V + + G+ VAVK++ + Q E NE++++ H N+V ++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ E ++ E++ +L TD + ++ + + Q L
Sbjct: 141 LVGDELWVVMEFLEGGAL----------------TDIVTHTRMNEEQIAAVCLAVLQALS 184
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
LH VIHRD+K+ ++LL D K+SDFG + +VGT +M+P
Sbjct: 185 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 239
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDP 409
E + + D++S G++++E + + ++N L A + +D+ L P
Sbjct: 240 ELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPLK----AMKMIRDN-----LPP 288
Query: 410 TLQN-EALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
L+N + P +K ++ L+ + A R T +E++
Sbjct: 289 RLKNLHKVSPSLKGFLDRLLV---RDPAQRATAAELL 322
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 34/246 (13%)
Query: 158 SISTATHNFSEENKLGEGGFGPVY------KGKLLNGEEVAVKRLSNKSGQGVEEFKNEM 211
+I ++FS +G GGFG VY GK+ + + KR+ K G+ + NE
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA--LNER 239
Query: 212 ILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGI 271
I+++ + + F C+ Y + L F L +G D+ + G+
Sbjct: 240 IMLSLVSTGDCP--FIVCMS-------YAFHTPDKLSFIL---DLMNGGDLHYHLSQHGV 287
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
I GL ++H +R V++RDLK +N+LLD + +ISD G+A F
Sbjct: 288 FSEADMRFYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 344
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL------SSKKNTRFYN 384
+ ++ VGT+GYM+PE G+ + +D FS G +L + L K +
Sbjct: 345 KPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE 400
Query: 385 IDSLTL 390
ID +TL
Sbjct: 401 IDRMTL 406
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 34/246 (13%)
Query: 158 SISTATHNFSEENKLGEGGFGPVY------KGKLLNGEEVAVKRLSNKSGQGVEEFKNEM 211
+I ++FS +G GGFG VY GK+ + + KR+ K G+ + NE
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA--LNER 240
Query: 212 ILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGI 271
I+++ + + F C+ Y + L F L +G D+ + G+
Sbjct: 241 IMLSLVSTGDCP--FIVCMS-------YAFHTPDKLSFIL---DLMNGGDLHYHLSQHGV 288
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
I GL ++H +R V++RDLK +N+LLD + +ISD G+A F
Sbjct: 289 FSEADMRFYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL------SSKKNTRFYN 384
+ ++ VGT+GYM+PE G+ + +D FS G +L + L K +
Sbjct: 346 KPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE 401
Query: 385 IDSLTL 390
ID +TL
Sbjct: 402 IDRMTL 407
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 165 NFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLH 218
+F LG+G FG VY + K + +V K K+G VE + + E+ + + L
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG--VEHQLRREVEIQSHLR 70
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
H N++RL+G + LI EY P L + + S FD + T
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFD-----------EQRTAT 116
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
I E +A L Y H RVIHRD+K N+LL + KI+DFG + S +
Sbjct: 117 YITE-LANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRD 168
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
+ GT Y+ PE + K D++S GVL E L
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 96/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 68
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 114
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 115 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 166
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE K D++S GVL E L K
Sbjct: 167 RRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 60
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 106
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI+DFG + S
Sbjct: 107 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 158
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 159 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEE----VAVKRLSNKSGQGV-EEFKNEMILIAKLHHRNLVRLF 226
+GEG FG V++G ++ E VA+K N + V E+F E + + + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G I + +I E L FL K+S LD + + ++
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKFS--------------LDLASLILYAYQLST 122
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YL R +HRD+ A NVL+ K+ DFG++R + D ++ +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 178
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETL 374
M+PE F+ SDV+ FGV + E L
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 100/231 (43%), Gaps = 34/231 (14%)
Query: 155 SLASISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLS-NKSGQGVEEFK-NEM 211
S A +T+ + KLGEG +G VYK + E VA+KR+ +GV E+
Sbjct: 25 SAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREV 84
Query: 212 ILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGI 271
L+ +L HRN++ L LI+EY N + M +P
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKY------------MDKNP----- 127
Query: 272 LDWTTRV--RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL---DGDMNP--KISDFGI 324
D + RV + + G+ + H SR R +HRDLK N+LL D P KI DFG+
Sbjct: 128 -DVSMRVIKSFLYQLINGVNFCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183
Query: 325 ARMFGGDELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
AR FG Q I T Y PE L +S D++S + E L
Sbjct: 184 ARAFGIPIRQFTHEII--TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 107/269 (39%), Gaps = 72/269 (26%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E+K M IL HH N
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKML--KEGATASEYKALMTELKILTHIGHHLN 92
Query: 222 LVRLFGCCIEQGEKILIY----------EYMPNKSLDFFL----------FDYKYSSGFD 261
+V L G C +QG +++ Y+ +K FFL K G +
Sbjct: 93 VVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLE 152
Query: 262 MVTDP-----------ASKGILDWTTRVRIIE----------------------GIAQGL 288
P AS G + + + E +A+G+
Sbjct: 153 QGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGM 212
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF--GGDELQSNMNRIVGTYGY 346
+L S + IHRDL A N+LL + KI DFG+AR D ++ R+ +
Sbjct: 213 EFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL--PLKW 267
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETLS 375
M+PE ++S KSDV+S+GVLL E S
Sbjct: 268 MAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 164 HNFSEENKLGEGGFGPVYKGKLLNGEE-VAVKRLS-NKSGQGVEEFK-NEMILIAKLHHR 220
+ + K+GEG +G V+K K E VA+KR+ + +GV E+ L+ +L H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 221 NLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
N+VRL + L++E+ D FD + G LD
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFC----------DQDLKKYFD-----SCNGDLDPEIVKSF 106
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+ + +GL + H + V+HRDLK N+L++ + K++DFG+AR FG ++ +
Sbjct: 107 LFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEV 162
Query: 341 VGTYGYMSPEYALHG-LFSIKSDVFSFGVLLLETLSSKK 378
V T Y P+ L+S D++S G + E ++ +
Sbjct: 163 V-TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 96/216 (44%), Gaps = 30/216 (13%)
Query: 165 NFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLH 218
+F LG+G FG VY + K + +V K K+G VE + + E+ + + L
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG--VEHQLRREVEIQSHLR 70
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
H N++RL+G + LI EY P L + + S FD + T
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFD-----------EQRTAT 116
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
I E +A L Y H RVIHRD+K N+LL + KI+DFG + S
Sbjct: 117 YITE-LANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRT 168
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
+ GT Y+ PE + K D++S GVL E L
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 172 LGEGGFGPVYKGKLLNGEE-VAVKRLSNKSGQGVE-EFKNEMILIAKLHHRNLVRLFGCC 229
LG G F V + ++ VA+K ++ ++ +G E +NE+ ++ K+ H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
G LI + + L FD GF D + R+I + +
Sbjct: 86 ESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDAS-----------RLIFQVLDAVK 130
Query: 290 YLHQYSRLRVIHRDLKASNVL---LDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
YLH L ++HRDLK N+L LD D ISDFG+++M ++ S ++ GT GY
Sbjct: 131 YLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGY 184
Query: 347 MSPEYALHGLFSIKSDVFSFGVL 369
++PE +S D +S GV+
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 65
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 111
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI++FG + S
Sbjct: 112 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSS 163
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 164 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMIL-IAKLHHRN-- 221
+F + ++LG G G V+K V ++L + + +N++I + LH N
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSP 126
Query: 222 -LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
+V +G GE + E+M SLD L G + ++
Sbjct: 127 YIVGFYGAFYSDGEISICMEHMDGGSLDQVL---------------KKAGRIPEQILGKV 171
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+ +GL YL + + +++HRD+K SN+L++ K+ DFG++ G + S N
Sbjct: 172 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSF 225
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
VGT YMSPE +S++SD++S G+ L+E
Sbjct: 226 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 257
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 170 NKLGEGGFGPVYKGK--LLNGE--EVAVKRLSN---KSGQGVEEFKNEMILIAKLHHRNL 222
KLG+G FG V +G+ +G+ VAVK L + +++F E+ + L HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL+G + K ++ E P SL D + +L +R +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSL------------LDRLRKHQGHFLLGTLSRYAV-- 118
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM--NRI 340
+A+G+ YL R IHRDL A N+LL KI DFG+ R ++ M +R
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 175
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V + + +PE FS SD + FGV L E +
Sbjct: 176 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 142/312 (45%), Gaps = 58/312 (18%)
Query: 155 SLASISTATHNFSEEN-------KLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEE 206
S A IS NF + +LG G +G V K + + +G+ +AVKR+ ++ +E
Sbjct: 35 SKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQE 92
Query: 207 FKNEMILIAKLHHRNL-----VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFD 261
K +++ + R + V +G +G+ + E M + SLD F +
Sbjct: 93 QKR-LLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKF---------YK 141
Query: 262 MVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISD 321
V D D ++ + I + L +LH S+L VIHRD+K SNVL++ K+ D
Sbjct: 142 QVIDKGQTIPEDILGKIAV--SIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCD 197
Query: 322 FGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGL----FSIKSDVFSFGVLLLETLSSK 377
FGI+ + D + ++ G YM+PE L +S+KSD++S G+ ++E
Sbjct: 198 FGISG-YLVDSVAKTID--AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE----- 249
Query: 378 KNTRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQNEAL-YPMVK---RYIKVALLCVQE 433
L +L ++ W ++ L ++ + P K ++ C+++
Sbjct: 250 ----------LAILRFPYDSW--GTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKK 297
Query: 434 NAADRPTMSEVV 445
N+ +RPT E++
Sbjct: 298 NSKERPTYPELM 309
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMIL-IAKLHHRN-- 221
+F + ++LG G G V+K V ++L + + +N++I + LH N
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNSP 64
Query: 222 -LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
+V +G GE + E+M SLD L G + ++
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVL---------------KKAGRIPEQILGKV 109
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+ +GL YL + + +++HRD+K SN+L++ K+ DFG++ G + S N
Sbjct: 110 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSF 163
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
VGT YMSPE +S++SD++S G+ L+E
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMIL-IAKLHHRN-- 221
+F + ++LG G G V+K V ++L + + +N++I + LH N
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNSP 64
Query: 222 -LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
+V +G GE + E+M SLD L G + ++
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVL---------------KKAGRIPEQILGKV 109
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+ +GL YL + + +++HRD+K SN+L++ K+ DFG++ G + S N
Sbjct: 110 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSF 163
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
VGT YMSPE +S++SD++S G+ L+E
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 27/210 (12%)
Query: 172 LGEGGFGPVYKGKLLNGEE-VAVKRLS----NKSGQGVEEFK-NEMILIAKLHHRNLVRL 225
LGEG F VYK + N + VA+K++ +++ G+ E+ L+ +L H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
+ L++++M L+ + D ++T K + T
Sbjct: 78 LDAFGHKSNISLVFDFM-ETDLEVIIKDNSL-----VLTPSHIKAYMLMTL--------- 122
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
QGL YLHQ+ ++HRDLK +N+LLD + K++DFG+A+ FG ++ +++V T
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAYXHQVV-TRW 177
Query: 346 YMSPEYALHG-LFSIKSDVFSFGVLLLETL 374
Y +PE ++ + D+++ G +L E L
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 170 NKLGEGGFGPVYKGK--LLNGE--EVAVKRLSN---KSGQGVEEFKNEMILIAKLHHRNL 222
KLG+G FG V +G+ +G+ VAVK L + +++F E+ + L HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL+G + K ++ E P SL D + +L +R +
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSL------------LDRLRKHQGHFLLGTLSRYAV-- 128
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM--NRI 340
+A+G+ YL R IHRDL A N+LL KI DFG+ R ++ M +R
Sbjct: 129 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 185
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V + + +PE FS SD + FGV L E +
Sbjct: 186 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMIL-IAKLHHRN-- 221
+F + ++LG G G V+K V ++L + + +N++I + LH N
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNSP 64
Query: 222 -LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
+V +G GE + E+M SLD L G + ++
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVL---------------KKAGRIPEQILGKV 109
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+ +GL YL + + +++HRD+K SN+L++ K+ DFG++ G + S N
Sbjct: 110 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSF 163
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
VGT YMSPE +S++SD++S G+ L+E
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 171 KLGEGGFGPVYKGK--LLNGE--EVAVKRLSN---KSGQGVEEFKNEMILIAKLHHRNLV 223
KLG+G FG V +G+ +G+ VAVK L + +++F E+ + L HRNL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
RL+G + K ++ E P SL D + +L +R +
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSL------------LDRLRKHQGHFLLGTLSRYAV--Q 123
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM--NRIV 341
+A+G+ YL R IHRDL A N+LL KI DFG+ R ++ M +R V
Sbjct: 124 VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+ + +PE FS SD + FGV L E +
Sbjct: 181 -PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMIL-IAKLHHRN-- 221
+F + ++LG G G V+K V ++L + + +N++I + LH N
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSP 91
Query: 222 -LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
+V +G GE + E+M SLD L G + ++
Sbjct: 92 YIVGFYGAFYSDGEISICMEHMDGGSLDQVL---------------KKAGRIPEQILGKV 136
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+ +GL YL + + +++HRD+K SN+L++ K+ DFG++ G + S N
Sbjct: 137 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSF 190
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
VGT YMSPE +S++SD++S G+ L+E
Sbjct: 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 222
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 162 ATHNFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIA 215
A +F LG+G FG VY + K + +V K K+G VE + + E+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQS 66
Query: 216 KLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L H N++RL+G + LI EY P L + + S FD +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD-----------EQR 112
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQS 335
T I E +A L Y H RVIHRD+K N+LL KI++FG + S
Sbjct: 113 TATYITE-LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSS 164
Query: 336 NMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y+ PE + K D++S GVL E L K
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 171 KLGEGGFGPVYKG--KLLNGE-EVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLVRLF 226
+LG G FG V +G ++ + +VA+K L + + EE E ++ +L + +VRL
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 227 GCCIEQGEKI-LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G C Q E + L+ E L FL + V + ++ ++
Sbjct: 403 GVC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAE--------------LLHQVS 446
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
G+ YL + + +HR+L A NVLL KISDFG+++ G D+ R G +
Sbjct: 447 MGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWP 502
Query: 346 --YMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+ +PE FS +SDV+S+GV + E LS
Sbjct: 503 LKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMIL-IAKLHHRN-- 221
+F + ++LG G G V+K V ++L + + +N++I + LH N
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNSP 83
Query: 222 -LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
+V +G GE + E+M SLD L G + ++
Sbjct: 84 YIVGFYGAFYSDGEISICMEHMDGGSLDQVL---------------KKAGRIPEQILGKV 128
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+ +GL YL + + +++HRD+K SN+L++ K+ DFG++ G + S N
Sbjct: 129 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSF 182
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
VGT YMSPE +S++SD++S G+ L+E
Sbjct: 183 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 170 NKLGEGGFGPVYKGK--LLNGE--EVAVKRLSN---KSGQGVEEFKNEMILIAKLHHRNL 222
KLG+G FG V +G+ +G+ VAVK L + +++F E+ + L HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL+G + K ++ E P SL D + +L +R +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSL------------LDRLRKHQGHFLLGTLSRYAV-- 118
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM--NRI 340
+A+G+ YL R IHRDL A N+LL KI DFG+ R ++ M +R
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V + + +PE FS SD + FGV L E +
Sbjct: 176 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEE----VAVKRLSNKSGQGV-EEFKNEMILIAKLHHRNLVRLF 226
+GEG FG V++G ++ E VA+K N + V E+F E + + + H ++V+L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G I + +I E L FL K+S LD + + ++
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFLQVRKFS--------------LDLASLILYAYQLST 502
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YL R +HRD+ A NVL+ + K+ DFG++R + D ++ +
Sbjct: 503 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 558
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETL 374
M+PE F+ SDV+ FGV + E L
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMIL-IAKLHHRN-- 221
+F + ++LG G G V+K V ++L + + +N++I + LH N
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNSP 64
Query: 222 -LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
+V +G GE + E+M SLD L G + ++
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVL---------------KKAGRIPEQILGKV 109
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+ +GL YL + + +++HRD+K SN+L++ K+ DFG++ G + S N
Sbjct: 110 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSF 163
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
VGT YMSPE +S++SD++S G+ L+E
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMIL-IAKLHHRN-- 221
+F + ++LG G G V+K V ++L + + +N++I + LH N
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNSP 64
Query: 222 -LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
+V +G GE + E+M SLD L G + ++
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVL---------------KKAGRIPEQILGKV 109
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+ +GL YL + + +++HRD+K SN+L++ K+ DFG++ G + S N
Sbjct: 110 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSF 163
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
VGT YMSPE +S++SD++S G+ L+E
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 170 NKLGEGGFGPVYKGK--LLNGE--EVAVKRLSN---KSGQGVEEFKNEMILIAKLHHRNL 222
KLG+G FG V +G+ +G+ VAVK L + +++F E+ + L HRNL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL+G + K ++ E P SL D + +L +R +
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSL------------LDRLRKHQGHFLLGTLSRYAV-- 122
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM--NRI 340
+A+G+ YL R IHRDL A N+LL KI DFG+ R ++ M +R
Sbjct: 123 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V + + +PE FS SD + FGV L E +
Sbjct: 180 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 170 NKLGEGGFGPVYKGK--LLNGE--EVAVKRLSN---KSGQGVEEFKNEMILIAKLHHRNL 222
KLG+G FG V +G+ +G+ VAVK L + +++F E+ + L HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL+G + K ++ E P SL D + +L +R +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSL------------LDRLRKHQGHFLLGTLSRYAV-- 118
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM--NRI 340
+A+G+ YL R IHRDL A N+LL KI DFG+ R ++ M +R
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V + + +PE FS SD + FGV L E +
Sbjct: 176 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 170 NKLGEGGFGPVYKGK--LLNGE--EVAVKRLSN---KSGQGVEEFKNEMILIAKLHHRNL 222
KLG+G FG V +G+ +G+ VAVK L + +++F E+ + L HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL+G + K ++ E P SL D + +L +R +
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSL------------LDRLRKHQGHFLLGTLSRYAV-- 128
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM--NRI 340
+A+G+ YL R IHRDL A N+LL KI DFG+ R ++ M +R
Sbjct: 129 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V + + +PE FS SD + FGV L E +
Sbjct: 186 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 109
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 157
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 158 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 212
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 213 NVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 83
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 131
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 132 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 186
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 187 NVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 94
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 142
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 143 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 197
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 198 NVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 87
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 135
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 136 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 190
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 191 NVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 107/262 (40%), Gaps = 60/262 (22%)
Query: 172 LGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQ-GVEEFKNEMILIAKLHHRNLVRLFGCC 229
+G GGFG V++ K ++ A+KR+ + + E+ E+ +AKL H +VR F
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 73
Query: 230 IEQGEKILIYE----YMPNKSLDFFL------------------FDYKYSSGFDMVTDPA 267
+E + E ++ ++S D+ L F K + G + P
Sbjct: 74 LETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPK 133
Query: 268 -----------SKGILDWTTR------------VRIIEGIAQGLLYLHQYSRLRVIHRDL 304
+ + DW R + I IA+ + +LH ++HRDL
Sbjct: 134 VYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDL 190
Query: 305 KASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI----------VGTYGYMSPEYALH 354
K SN+ D K+ DFG+ DE + + VGT YMSPE
Sbjct: 191 KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHG 250
Query: 355 GLFSIKSDVFSFGVLLLETLSS 376
+S K D+FS G++L E L S
Sbjct: 251 NNYSHKVDIFSLGLILFELLYS 272
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 103
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 151
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 152 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 206
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 207 NVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 109
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 157
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 158 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 212
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 213 NVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 87
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 135
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 136 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 190
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 191 NVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 28/212 (13%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKS----GQGVEEFKNEMILIAKLHHRNLVRLFG 227
LG+GGF Y+ ++ +EV ++ KS E+ E+ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ ++ E +SL + VT+P ++ + T QG
Sbjct: 110 FFEDDDFVYVVLEICRRRSL------LELHKRRKAVTEPEARYFMRQTI---------QG 154
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARM--FGGDELQSNMNRIVGTYG 345
+ YLH RVIHRDLK N+ L+ DM+ KI DFG+A F G+ ++ + GT
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT----LCGTPN 207
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
Y++PE S + D++S G +L L K
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEE----VAVKRLSNKSGQGV-EEFKNEMILIAKLHHRNLVRLF 226
+GEG FG V++G ++ E VA+K N + V E+F E + + + H ++V+L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
G I + +I E L FL K+S LD + + ++
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFLQVRKFS--------------LDLASLILYAYQLST 502
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
L YL R +HRD+ A NVL+ K+ DFG++R + D ++ +
Sbjct: 503 ALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 558
Query: 347 MSPEYALHGLFSIKSDVFSFGVLLLETL 374
M+PE F+ SDV+ FGV + E L
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 76
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 124
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 125 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 179
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 180 NVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 123
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 178
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 179 NVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 123
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 178
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 179 NVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 113
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 161
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 162 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 216
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 217 NVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 123
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 178
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 179 NVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 111
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 159
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 160 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 214
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 215 NVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 26/224 (11%)
Query: 153 FFSLASISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNK--SGQGVEEFKN 209
F +A+ + T ++ +LG+G F V + K +E A K ++ K S + ++ +
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER 79
Query: 210 EMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASK 269
E + L H N+VRL E+G L+++ + +G ++ D ++
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLV---------------TGGELFEDIVAR 124
Query: 270 GILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN---PKISDFGIAR 326
I I + + ++HQ+ ++HRDLK N+LL K++DFG+A
Sbjct: 125 EYYSEADASHCIHQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAI 181
Query: 327 MFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLL 370
G+ Q GT GY+SPE + D+++ GV+L
Sbjct: 182 EVQGE--QQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ QG + FKN E+ ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNI 75
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 123
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 178
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 179 NVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 80
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 128
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 129 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 183
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 184 NVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ QG + FKN E+ ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNI 75
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATV-------YRVARHYSR-----AKQTLPVIY 123
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 178
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 179 NVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 154
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 202
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 203 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 257
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 258 NVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ QG + FKN E+ ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNI 75
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 123
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 178
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 179 NVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 49/288 (17%)
Query: 171 KLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNL-----VR 224
+LG G +G V K + + +G+ +AVKR+ ++ +E K +++ + R + V
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKR-LLMDLDISMRTVDCPFTVT 70
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
+G +G+ + E M + SLD F + V D D ++ + I
Sbjct: 71 FYGALFREGDVWICMELM-DTSLDKF---------YKQVIDKGQTIPEDILGKIAV--SI 118
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
+ L +LH S+L VIHRD+K SNVL++ K+ DFGI+ + D++ +++ G
Sbjct: 119 VKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISG-YLVDDVAKDID--AGCK 173
Query: 345 GYMSPEYALHGL----FSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWK- 399
YM+PE L +S+KSD++S G+ ++E L +L ++ W
Sbjct: 174 PYMAPERINPELNQKGYSVKSDIWSLGITMIE---------------LAILRFPYDSWGT 218
Query: 400 --DDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVV 445
+ +P+ Q A ++ C+++N+ +RPT E++
Sbjct: 219 PFQQLKQVVEEPSPQLPA-DKFSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 79
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 127
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 128 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 182
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 183 NVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 171 KLGEGGFGPVYKGK-LLNGEEVAVK-----RLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
KLG G +G V K L G E A+K ++ S G +E+ ++ +L H N+++
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGA--LLDEVAVLKQLDHPNIMK 68
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSG--FDMVTDPASKGILDWTTRVRIIE 282
L YE+ +K +++L Y G FD + +D I++
Sbjct: 69 L-------------YEFFEDKR-NYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMK 111
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDG---DMNPKISDFGIARMFGGDELQSNMNR 339
+ G YLH+++ ++HRDLK N+LL+ D KI DFG++ F E+ M
Sbjct: 112 QVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKE 165
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLL 370
+GT Y++PE L + K DV+S GV+L
Sbjct: 166 RLGTAYYIAPE-VLRKKYDEKCDVWSCGVIL 195
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 88
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 136
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 137 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 191
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 192 NVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 28/212 (13%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKS----GQGVEEFKNEMILIAKLHHRNLVRLFG 227
LG+GGF Y+ ++ +EV ++ KS E+ E+ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ ++ E +SL + VT+P ++ + T QG
Sbjct: 110 FFEDDDFVYVVLEICRRRSL------LELHKRRKAVTEPEARYFMRQTI---------QG 154
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARM--FGGDELQSNMNRIVGTYG 345
+ YLH RVIHRDLK N+ L+ DM+ KI DFG+A F G+ + + GT
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD----LCGTPN 207
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
Y++PE S + D++S G +L L K
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNL 222
++++ +G G FG VY+ KL + GE VA+K++ + FKN E+ ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 223 VRLFGCCIEQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
VRL GEK L+ +Y+P Y+ + + +K L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV-------YRVARHYSR-----AKQTLPVIY 123
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQS 335
+ + + L Y+H + + HRD+K N+LLD D K+ DFG A+ E
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--P 178
Query: 336 NMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETL 374
N++ I Y Y +PE ++ DV+S G +L E L
Sbjct: 179 NVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 168 EENKLGEGGFGPVYKGKL---LNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNL 222
E+ +LG G FG V KG + VAVK L N++ +E E ++ +L + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VR+ G C E +L+ E L+ +L ++ V D K I++ ++
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH------VKD---KNIIE------LVH 134
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE----LQSNMN 338
++ G+ YL + + +HRDL A NVLL KISDFG+++ DE Q++
Sbjct: 135 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V Y +PE + FS KSDV+SFGVL+ E S
Sbjct: 192 WPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 168 EENKLGEGGFGPVYKGKL---LNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNL 222
E+ +LG G FG V KG + VAVK L N++ +E E ++ +L + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VR+ G C E +L+ E L+ +L ++ V D K I++ ++
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH------VKD---KNIIE------LVH 134
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE----LQSNMN 338
++ G+ YL + + +HRDL A NVLL KISDFG+++ DE Q++
Sbjct: 135 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V Y +PE + FS KSDV+SFGVL+ E S
Sbjct: 192 WPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 27/212 (12%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMIL-IAKLHHRN-- 221
+F + ++LG G G V+K V ++L + + +N++I + LH N
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNSP 67
Query: 222 -LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
+V +G GE + E+M SLD L G + ++
Sbjct: 68 YIVGFYGAFYSDGEISICMEHMDGGSLDQVL---------------KKAGRIPEQILGKV 112
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+ +GL YL + + +++HRD+K SN+L++ K+ DFG++ G + N
Sbjct: 113 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEF 166
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
VGT YMSPE +S++SD++S G+ L+E
Sbjct: 167 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 198
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 163 THNFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEE---FKNEMILIAKLH 218
+ + KLG G +G V K L G E A+K + S +E+ ++ +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSG--FDMVTDPASKGILDWTT 276
H N+++L YE+ +K +++L Y G FD + +D
Sbjct: 80 HPNIMKL-------------YEFFEDKR-NYYLVMEVYRGGELFDEIILRQKFSEVDAAV 125
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDG---DMNPKISDFGIARMFGGDEL 333
I++ + G YLH+++ ++HRDLK N+LL+ D KI DFG++ F E+
Sbjct: 126 ---IMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EV 176
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLL 370
M +GT Y++PE L + K DV+S GV+L
Sbjct: 177 GGKMKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVIL 212
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 28/212 (13%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKS----GQGVEEFKNEMILIAKLHHRNLVRLFG 227
LG+GGF Y+ ++ +EV ++ KS E+ E+ + L + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ ++ E +SL + VT+P ++ + T QG
Sbjct: 94 FFEDDDFVYVVLEICRRRSL------LELHKRRKAVTEPEARYFMRQTI---------QG 138
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARM--FGGDELQSNMNRIVGTYG 345
+ YLH RVIHRDLK N+ L+ DM+ KI DFG+A F G+ + + GT
Sbjct: 139 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD----LCGTPN 191
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
Y++PE S + D++S G +L L K
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 24/210 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKS----GQGVEEFKNEMILIAKLHHRNLVRLFG 227
LG+GGF Y+ ++ +EV ++ KS E+ E+ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ ++ E +SL + VT+P ++ + T QG
Sbjct: 110 FFEDDDFVYVVLEICRRRSL------LELHKRRKAVTEPEARYFMRQTI---------QG 154
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
+ YLH RVIHRDLK N+ L+ DM+ KI DFG+A D + GT Y+
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKXLCGTPNYI 209
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+PE S + D++S G +L L K
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 168 EENKLGEGGFGPVYKG---KLLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNL 222
E+ +LG G FG V KG + VAVK L N++ +E E ++ +L + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VR+ G C E +L+ E L+ +L ++ V D K I++ ++
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH------VKD---KNIIE------LVH 118
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE----LQSNMN 338
++ G+ YL + + +HRDL A NVLL KISDFG+++ DE Q++
Sbjct: 119 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGK 175
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V Y +PE + FS KSDV+SFGVL+ E S
Sbjct: 176 WPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 168 EENKLGEGGFGPVYKGKL---LNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNL 222
E+ +LG G FG V KG + VAVK L N++ +E E ++ +L + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VR+ G C E +L+ E L+ +L ++ V D K I++ ++
Sbjct: 69 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH------VKD---KNIIE------LVH 112
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE----LQSNMN 338
++ G+ YL + + +HRDL A NVLL KISDFG+++ DE Q++
Sbjct: 113 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 169
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V Y +PE + FS KSDV+SFGVL+ E S
Sbjct: 170 WPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 168 EENKLGEGGFGPVYKG---KLLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNL 222
E+ +LG G FG V KG + VAVK L N++ +E E ++ +L + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VR+ G C E +L+ E L+ +L ++ V D K I++ ++
Sbjct: 81 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH------VKD---KNIIE------LVH 124
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE----LQSNMN 338
++ G+ YL + + +HRDL A NVLL KISDFG+++ DE Q++
Sbjct: 125 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 181
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V Y +PE + FS KSDV+SFGVL+ E S
Sbjct: 182 WPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 164 HNFSEENKLGEGGFGPVYKGKLLNGEE-VAVKRLS-NKSGQGVEEFK-NEMILIAKLHHR 220
+ + K+GEG +G V+K K E VA+KR+ + +GV E+ L+ +L H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 221 NLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
N+VRL + L++E+ D FD + G LD
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFC----------DQDLKKYFD-----SCNGDLDPEIVKSF 106
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+ + +GL + H + V+HRDLK N+L++ + K+++FG+AR FG ++ +
Sbjct: 107 LFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEV 162
Query: 341 VGTYGYMSPEYALHG-LFSIKSDVFSFGVLLLE 372
V T Y P+ L+S D++S G + E
Sbjct: 163 V-TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE 194
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 161 TATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHR 220
T H + +G+G +G V++G GE VAVK S++ + + E+ L H
Sbjct: 5 TVAHQITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHE 62
Query: 221 NLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
N++ + + S +L + + G + D LD + +RI
Sbjct: 63 NILGFIASDMTSR----------HSSTQLWLITHYHEMG--SLYDYLQLTTLDTVSCLRI 110
Query: 281 IEGIAQGLLYLH-----QYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF--GGDEL 333
+ IA GL +LH + + HRDLK+ N+L+ + I+D G+A M ++L
Sbjct: 111 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL 170
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSI-------KSDVFSFGVLLLET 373
N VGT YM+PE L + + D+++FG++L E
Sbjct: 171 DVGNNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 168 EENKLGEGGFGPVYKGKL---LNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNL 222
E+ +LG G FG V KG + VAVK L N++ +E E ++ +L + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VR+ G C E +L+ E L+ +L ++ V D K I++ ++
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH------VKD---KNIIE------LVH 118
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE----LQSNMN 338
++ G+ YL + + +HRDL A NVLL KISDFG+++ DE Q++
Sbjct: 119 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 175
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V Y +PE + FS KSDV+SFGVL+ E S
Sbjct: 176 WPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 168 EENKLGEGGFGPVYKGKL---LNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNL 222
E+ +LG G FG V KG + VAVK L N++ +E E ++ +L + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VR+ G C E +L+ E L+ +L ++ V D K I++ ++
Sbjct: 71 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH------VKD---KNIIE------LVH 114
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE----LQSNMN 338
++ G+ YL + + +HRDL A NVLL KISDFG+++ DE Q++
Sbjct: 115 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V Y +PE + FS KSDV+SFGVL+ E S
Sbjct: 172 WPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGE-EVAVKRL--SNKSGQGVE-EFKNEMILIAKLHHR 220
+F LG+G FG VY + VA+K L S +GVE + + E+ + A LHH
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 221 NLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
N++RL+ ++ LI EY P L YK + D I
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGEL------YK---------ELQKSCTFDEQRTATI 128
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+E +A L+Y H +VIHRD+K N+LL KI+DFG + L+ +
Sbjct: 129 MEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKT--M 181
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
GT Y+ PE + + K D++ GVL E L
Sbjct: 182 CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELL 215
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 42/231 (18%)
Query: 171 KLGEGGFGPVYKG-KLLNGEEVAVKRLSN---KSGQGVEEFKNEMILIAKLHHRNLVRLF 226
KLG+G +G V+K GE VAVK++ + S F+ MIL H N+V L
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
++ + + +FDY + ++ IL+ + ++ + +
Sbjct: 76 NVLRADNDRDV-----------YLVFDYMETDLHAVI----RANILEPVHKQYVVYQLIK 120
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGG---------------- 330
+ YLH ++HRD+K SN+LL+ + + K++DFG++R F
Sbjct: 121 VIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 331 ---DELQSNMNRIVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
D+ Q + V T Y +PE L K D++S G +L E L K
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 168 EENKLGEGGFGPVYKGKL---LNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNL 222
E+ +LG G FG V KG + VAVK L N++ +E E ++ +L + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VR+ G C E +L+ E L+ +L ++ V D K I++ ++
Sbjct: 89 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH------VKD---KNIIE------LVH 132
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE----LQSNMN 338
++ G+ YL + + +HRDL A NVLL KISDFG+++ DE Q++
Sbjct: 133 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 189
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V Y +PE + FS KSDV+SFGVL+ E S
Sbjct: 190 WPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 154 FSLASISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNK--SGQGVEEFKNE 210
F + + + + N+ + +LG+G F V + G E A K ++ K S + ++ + E
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 211 MILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKG 270
+ KL H N+VRL ++ + +S + +FD +G ++ D ++
Sbjct: 79 ARICRKLQHPNIVRL-------------HDSIQEESFHYLVFDL--VTGGELFEDIVARE 123
Query: 271 ILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN---PKISDFGIARM 327
I+ I + + Y H ++HR+LK N+LL K++DFG+A
Sbjct: 124 FYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180
Query: 328 FGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLL 370
E + GT GY+SPE +S D+++ GV+L
Sbjct: 181 VNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 168 EENKLGEGGFGPVYKG---KLLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNL 222
E+ +LG G FG V KG + VAVK L N++ +E E ++ +L + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VR+ G C E +L+ E L+ +L ++ V D K I++ ++
Sbjct: 433 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH------VKD---KNIIE------LVH 476
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE----LQSNMN 338
++ G+ YL + + +HRDL A NVLL KISDFG+++ DE Q++
Sbjct: 477 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 533
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V Y +PE + FS KSDV+SFGVL+ E S
Sbjct: 534 WPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 165 NFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNK--SGQGVEEFKNEMILIAKLHHRN 221
N+ + +LG+G F V + G E A K ++ K S + ++ + E + KL H N
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 65
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+VRL ++ + +S + +FD +G ++ D ++ I
Sbjct: 66 IVRL-------------HDSIQEESFHYLVFDL--VTGGELFEDIVAREFYSEADASHCI 110
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN---PKISDFGIARMFGGDELQSNMN 338
+ I + + Y H ++HR+LK N+LL K++DFG+A E +
Sbjct: 111 QQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WH 164
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLL 370
GT GY+SPE +S D+++ GV+L
Sbjct: 165 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 165 NFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNK--SGQGVEEFKNEMILIAKLHHRN 221
N+ + +LG+G F V + G E A K ++ K S + ++ + E + KL H N
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+VRL ++ + +S + +FD +G ++ D ++ I
Sbjct: 67 IVRL-------------HDSIQEESFHYLVFDL--VTGGELFEDIVAREFYSEADASHCI 111
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN---PKISDFGIARMFGGDELQSNMN 338
+ I + + Y H ++HR+LK N+LL K++DFG+A E +
Sbjct: 112 QQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WH 165
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLL 370
GT GY+SPE +S D+++ GV+L
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 31/214 (14%)
Query: 172 LGEGGFGPV---YKGKLLNGEEVAVKRLSNKSGQGVEEFKN--EMILIAKLHHRNLVRLF 226
+G G +G V Y +L ++VAVK+LS + + E+ L+ L H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS--GFDMVTDPASKGILDWTTRVRIIEGI 284
+ P S++ F Y ++ G D+ S+ + D + ++ +
Sbjct: 94 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQL 140
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
+GL Y+H +IHRDLK SNV ++ D +I DFG+AR DE M V T
Sbjct: 141 LRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQ--ADE---EMTGYVATR 192
Query: 345 GYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L K
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 168 EENKLGEGGFGPVYKGKL---LNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNL 222
E+ +LG G FG V KG + VAVK L N++ +E E ++ +L + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
VR+ G C E +L+ E L+ +L ++ V D K I++ ++
Sbjct: 434 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH------VKD---KNIIE------LVH 477
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE----LQSNMN 338
++ G+ YL + + +HRDL A NVLL KISDFG+++ DE Q++
Sbjct: 478 QVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 534
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
V Y +PE + FS KSDV+SFGVL+ E S
Sbjct: 535 WPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 29/224 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKGKLLNGEEV-AVKRLSNKSGQGVEEFKNEMI---- 212
I +F LG+G FG V+ + + A+K L ++ + M+
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 213 LIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGIL 272
L H L +F C + E + F +Y +G D++ S
Sbjct: 72 LSLAWEHPFLTHMF-CTFQTKENLF--------------FVMEYLNGGDLMYHIQSCHKF 116
Query: 273 DWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIAR--MFGG 330
D + I GL +LH +++RDLK N+LLD D + KI+DFG+ + M G
Sbjct: 117 DLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG- 172
Query: 331 DELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
+ N GT Y++PE L ++ D +SFGVLL E L
Sbjct: 173 ---DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 213
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 165 NFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNK--SGQGVEEFKNEMILIAKLHHRN 221
N+ + +LG+G F V + G E A K ++ K S + ++ + E + KL H N
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+VRL ++ + +S + +FD +G ++ D ++ I
Sbjct: 67 IVRL-------------HDSIQEESFHYLVFDL--VTGGELFEDIVAREFYSEADASHCI 111
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN---PKISDFGIARMFGGDELQSNMN 338
+ I + + Y H ++HR+LK N+LL K++DFG+A E +
Sbjct: 112 QQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WH 165
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLL 370
GT GY+SPE +S D+++ GV+L
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 26/202 (12%)
Query: 172 LGEGGFGPVYKGKL-LNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
LG G F V+ K L G+ A+K + +NE+ ++ K+ H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED--- 73
Query: 231 EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLY 290
IYE S + + SG ++ +G+ +I+ + + Y
Sbjct: 74 -------IYE-----STTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKY 121
Query: 291 LHQYSRLRVIHRDLKASNVL-LDGDMNPKI--SDFGIARMFGGDELQSNMNRIVGTYGYM 347
LH+ ++HRDLK N+L L + N KI +DFG+++M E M+ GT GY+
Sbjct: 122 LHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYV 174
Query: 348 SPEYALHGLFSIKSDVFSFGVL 369
+PE +S D +S GV+
Sbjct: 175 APEVLAQKPYSKAVDCWSIGVI 196
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 170 NKLGEGGFGPVYKGK-LLNGEEVAVK--RLSNKSGQGVEEFKNEMILIAKLHHRNLVRLF 226
+KLGEG + VYKGK L VA+K RL ++ G + E+ L+ L H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLH 66
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
+ L++EY+ +K L +L D I++ + + +
Sbjct: 67 DIIHTEKSLTLVFEYL-DKDLKQYLDD--------------CGNIINMHNVKLFLFQLLR 111
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
GL Y H R +V+HRDLK N+L++ K++DFG+AR ++ N +V T Y
Sbjct: 112 GLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARA-KSIPTKTYDNEVV-TLWY 166
Query: 347 MSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
P+ L +S + D++ G + E + +
Sbjct: 167 RPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 204 VEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMV 263
+E+ E+ ++ KL H N+V+L E + + + D ++ + ++
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLV-------------EVLDDPNEDHLYMVFELVNQGPVM 126
Query: 264 TDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFG 323
P K + + R + + +G+ YLH ++IHRD+K SN+L+ D + KI+DFG
Sbjct: 127 EVPTLKPLSEDQARF-YFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFG 182
Query: 324 IARMF-GGDELQSNMNRIVGTYGYMSPE--YALHGLFSIKS-DVFSFGVLL 370
++ F G D L SN VGT +M+PE +FS K+ DV++ GV L
Sbjct: 183 VSNEFKGSDALLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIE 231
+G+G +G V++G L +GE VAVK S++ Q + E+ L H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMT 73
Query: 232 QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYL 291
N S +L + + G + D + L+ +R+ A GL +L
Sbjct: 74 SR----------NSSTQLWLITHYHEHG--SLYDFLQRQTLEPHLALRLAVSAACGLAHL 121
Query: 292 H-----QYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF--GGDELQSNMNRIVGTY 344
H + + HRD K+ NVL+ ++ I+D G+A M G D L N VGT
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTK 181
Query: 345 GYMSPEYALHGLF-----SIK-SDVFSFGVLLLE 372
YM+PE + S K +D+++FG++L E
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWE 215
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMIL-IAKLHHRN-- 221
+F ++LG G G V K + + ++L + + +N++I + LH N
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPA--IRNQIIRELQVLHECNSP 74
Query: 222 -LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
+V +G GE + E+M SLD L + K + IL +V I
Sbjct: 75 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR----------IPEEILG---KVSI 121
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRI 340
+ +GL YL + + +++HRD+K SN+L++ K+ DFG++ G + S N
Sbjct: 122 --AVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSF 173
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
VGT YM+PE +S++SD++S G+ L+E
Sbjct: 174 VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVE 205
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V LN VA+K++S Q + E+ ++ + H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 132
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V LN VA+K++S Q + E+ ++ + H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 132
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 29/224 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKGKLLNGEEV-AVKRLSNKSGQGVEEFKNEMI---- 212
I +F LG+G FG V+ + + A+K L ++ + M+
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 213 LIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGIL 272
L H L +F C + E + F +Y +G D++ S
Sbjct: 71 LSLAWEHPFLTHMF-CTFQTKENLF--------------FVMEYLNGGDLMYHIQSCHKF 115
Query: 273 DWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIAR--MFGG 330
D + I GL +LH +++RDLK N+LLD D + KI+DFG+ + M G
Sbjct: 116 DLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG- 171
Query: 331 DELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL 374
+ N GT Y++PE L ++ D +SFGVLL E L
Sbjct: 172 ---DAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 212
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V LN VA+K++S Q + E+ ++ + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHI----------CYFLYQIL 138
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V LN VA+K++S Q + E+ ++ + H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 139
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V LN VA+K++S Q + E+ ++ + H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 140
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 141 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V LN VA+K++S Q + E+ ++ + H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 131
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 132 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V LN VA+K++S Q + E+ ++ + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 138
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 172 LGEGGFGPV-YKGKLLNGEEVAVKRLS-NKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
+G GGF V +L GE VA+K + N G + K E+ + L H+++ +L+
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHV- 76
Query: 230 IEQGEKI-LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
+E KI ++ EY P L FDY S D +++ TRV + I +
Sbjct: 77 LETANKIFMVLEYCPGGEL----FDYIISQ--DRLSEEE--------TRV-VFRQIVSAV 121
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMS 348
Y+H HRDLK N+L D K+ DFG+ G++ ++ G+ Y +
Sbjct: 122 AYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK-DYHLQTCCGSLAYAA 177
Query: 349 PEYAL-HGLFSIKSDVFSFGVLL 370
PE ++DV+S G+LL
Sbjct: 178 PELIQGKSYLGSEADVWSMGILL 200
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 29/213 (13%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRLFG 227
+G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 98
Query: 228 CCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
+ P +SL+ F ++ + G D+ + + D + +I I
Sbjct: 99 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQIL 145
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
+GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 146 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVATRW 197
Query: 346 YMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V LN VA+K++S Q + E+ ++ + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDL------YKLLKCQHLSNDHIC----------YFLYQIL 138
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Query: 172 LGEGGFGPV---YKGKLLNGEEVAVKRLSNKSGQGVEEFKN--EMILIAKLHHRNLVRLF 226
+G G +G V Y +L ++VAVK+LS + + E+ L+ L H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS--GFDMVTDPASKGILDWTTRVRIIEGI 284
+ P S++ F Y ++ G D+ + + D + ++ +
Sbjct: 86 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQL 132
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
+GL Y+H +IHRDLK SNV ++ D +I DFG+AR DE M V T
Sbjct: 133 LRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQ--ADE---EMTGYVATR 184
Query: 345 GYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L K
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 31/229 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V + +G ++AVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 57 SPVGSGAYGSVCSSYDVKSGLKIAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 115
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P SL+ F ++ + G D+ + + D + +I
Sbjct: 116 LDV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 162
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 163 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 214
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLL 391
Y +PE L+ + +++ D++S G ++ E L+ + T F D + L
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR--TLFPGTDHINQL 261
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 70
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR
Sbjct: 119 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----- 169
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 170 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MAGFVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFK-NEMILIAKLHHRNLV----RL 225
+GEG +G V LN VA+K++S Q + E+ ++ + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 138
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MAGFVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 70
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR
Sbjct: 119 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----- 169
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 170 HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V LN VA+K++S Q + E+ ++ + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 138
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 34/232 (14%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 47 SPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 105
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 106 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 152
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR M V T
Sbjct: 153 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVAT 204
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSKKNTRFY---NIDSLTLL 391
Y +PE L+ + ++ D++S G ++ E L+ + T F +ID L L+
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQLKLI 254
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V LN VA+K++S Q + E+ ++ + H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 139
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIE 231
+G+G +G V++G GE VAVK S++ + + E+ L H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMT 73
Query: 232 QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYL 291
+ S +L + + G + D LD + +RI+ IA GL +L
Sbjct: 74 SR----------HSSTQLWLITHYHEMG--SLYDYLQLTTLDTVSCLRIVLSIASGLAHL 121
Query: 292 H-----QYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF--GGDELQSNMNRIVGTY 344
H + + HRDLK+ N+L+ + I+D G+A M ++L N VGT
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181
Query: 345 GYMSPEYALHGLFSI-------KSDVFSFGVLLLET 373
YM+PE L + + D+++FG++L E
Sbjct: 182 RYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 34/232 (14%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 93 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 139
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 140 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 191
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSKKNTRFY---NIDSLTLL 391
Y +PE L+ + ++ D++S G ++ E L+ + T F +ID L L+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQLKLI 241
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 34/232 (14%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 107 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 153
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR M V T
Sbjct: 154 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVAT 205
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSKKNTRFY---NIDSLTLL 391
Y +PE L+ + ++ D++S G ++ E L+ + T F +ID L L+
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQLKLI 255
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS K Q + K E+ L+ + H N++ L
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-KPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 99 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 145
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR M V T
Sbjct: 146 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVAT 197
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 94 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 140
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 141 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE----MTGYVAT 192
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYK------GKLLNGEEVAVKRLSN-KSGQGVEEFKNEMILIAKLHHRNLV 223
+LG G F V K GK + + +RLS+ + G EE + E+ ++ ++ H N++
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + +LI E + L FL A K L + ++
Sbjct: 72 TLHDIFENKTDVVLILELVSGGELFDFL---------------AEKESLTEDEATQFLKQ 116
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNV-LLDGDM-NPKIS--DFGIA-RMFGGDELQSNMN 338
I G+ YLH R+ H DLK N+ LLD ++ NP+I DFGIA ++ G+E ++
Sbjct: 117 ILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--- 170
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 171 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 206
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 94 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 140
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 141 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE----MTGYVAT 192
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 156 LASISTATHNFSEENKLGEGGFGPV------YKGKLLNGEEVAVKRLSNKSGQGVEEFKN 209
L + F + LG+GGFG V GK+ +++ KR+ + G+ + N
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LN 233
Query: 210 EMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASK 269
E ++ K++ R +V L + L+ M L F ++ + +GF P ++
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGF-----PEAR 287
Query: 270 GILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG 329
+ I GL LH R R+++RDLK N+LLD + +ISD G+A
Sbjct: 288 AVF-------YAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHV- 336
Query: 330 GDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
E Q+ R VGT GYM+PE + ++ D ++ G LL E ++ +
Sbjct: 337 -PEGQTIKGR-VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 171 KLGEGGFGPVYKG-KLLNGEEVAVKRLSNK--SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
+LG+G F V + K+ G+E A K ++ K S + ++ + E + L H N+VRL
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
E+G L+++ + +G ++ D ++ I+ I +
Sbjct: 71 SISEEGFHYLVFDLV---------------TGGELFEDIVAREYYSEADASHCIQQILES 115
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMN---PKISDFGIARMFGGDELQSNMNRIVGTY 344
+ + H ++HRDLK N+LL K++DFG+A GD Q GT
Sbjct: 116 VNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD--QQAWFGFAGTP 170
Query: 345 GYMSPEYALHGLFSIKSDVFSFGVLL 370
GY+SPE + D+++ GV+L
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 94 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 140
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 141 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE----MTGYVAT 192
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYK------GKLLNGEEVAVKRLSN-KSGQGVEEFKNEMILIAKLHHRNLV 223
+LG G F V K GK + + +RLS+ + G EE + E+ ++ ++ H N++
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + +LI E + L FL A K L + ++
Sbjct: 79 TLHDIFENKTDVVLILELVSGGELFDFL---------------AEKESLTEDEATQFLKQ 123
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNV-LLDGDM-NPKIS--DFGIA-RMFGGDELQSNMN 338
I G+ YLH R+ H DLK N+ LLD ++ NP+I DFGIA ++ G+E ++
Sbjct: 124 ILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--- 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 34/244 (13%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 94
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 95 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR
Sbjct: 143 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----- 193
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSKKNTRFY---NIDS 387
M V T Y +PE L+ + ++ D++S G ++ E L+ + T F +ID
Sbjct: 194 HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQ 251
Query: 388 LTLL 391
L L+
Sbjct: 252 LKLI 255
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Query: 172 LGEGGFGPV---YKGKLLNGEEVAVKRLSNKSGQGVEEFKN--EMILIAKLHHRNLVRLF 226
+G G +G V Y +L ++VAVK+LS + + E+ L+ L H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS--GFDMVTDPASKGILDWTTRVRIIEGI 284
+ P S++ F Y ++ G D+ + + D + ++ +
Sbjct: 94 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQL 140
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
+GL Y+H +IHRDLK SNV ++ D +I DFG+AR DE M V T
Sbjct: 141 LRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQ--ADE---EMTGYVATR 192
Query: 345 GYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L K
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 33 SPIGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 92 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 138
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 139 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDE----MTGYVAT 190
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V LN VA++++S Q + E+ ++ + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 138
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYK------GKLLNGEEVAVKRL-SNKSGQGVEEFKNEMILIAKLHHRNLV 223
+LG G F V K GK + + +RL S++ G EE + E+ ++ ++ H N++
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + +LI E + L FL A K L + ++
Sbjct: 93 TLHDIFENKTDVVLILELVSGGELFDFL---------------AEKESLTEDEATQFLKQ 137
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNV-LLDGDM-NPKIS--DFGIA-RMFGGDELQSNMN 338
I G+ YLH R+ H DLK N+ LLD ++ NP+I DFGIA ++ G+E ++
Sbjct: 138 ILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--- 191
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 192 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 227
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 156 LASISTATHNFSEENKLGEGGFGPV------YKGKLLNGEEVAVKRLSNKSGQGVEEFKN 209
L + F + LG+GGFG V GK+ +++ KR+ + G+ + N
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LN 233
Query: 210 EMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASK 269
E ++ K++ R +V L + L+ M L F ++ + +GF P ++
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGF-----PEAR 287
Query: 270 GILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFG 329
+ I GL LH R R+++RDLK N+LLD + +ISD G+A
Sbjct: 288 AVF-------YAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHV- 336
Query: 330 GDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
E Q+ R VGT GYM+PE + ++ D ++ G LL E ++ +
Sbjct: 337 -PEGQTIKGR-VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 37/219 (16%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI- 230
+G+G +G V++G GE VAVK S++ + + E+ L H N++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMT 102
Query: 231 ---EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ LI Y SL +DY + D V+ +RI+ IA G
Sbjct: 103 SRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVS------------CLRIVLSIASG 146
Query: 288 LLYLH-----QYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF--GGDELQSNMNRI 340
L +LH + + HRDLK+ N+L+ + I+D G+A M ++L N
Sbjct: 147 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 206
Query: 341 VGTYGYMSPEYALHGLFSI-------KSDVFSFGVLLLE 372
VGT YM+PE L + + D+++FG++L E
Sbjct: 207 VGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWE 244
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 153 FFSLA---SISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLSN--KSGQGV 204
F+S+ S T + +G G G V Y L VA+K+LS ++
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E++L+ ++H+N++ L + P K+L+ F Y D
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 115
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ LD ++ + G+ +LH +IHRDLK SN+++ D KI DFG+
Sbjct: 116 XQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 325 ARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
AR G + M V T Y +PE L + D++S G ++ E + K
Sbjct: 173 ARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 121/291 (41%), Gaps = 44/291 (15%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIE 231
+G+G FG VY G+ + + + + ++ FK E++ + H N+V G C+
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 232 QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYL 291
+I ++L + +V D +K +LD +I + I +G+ YL
Sbjct: 101 PPHLAIITSLCKGRTL------------YSVVRD--AKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 292 HQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY----- 346
H ++H+DLK+ NV D + I+DFG+ + G + +++ G+
Sbjct: 147 HAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLA 202
Query: 347 ------MSPEYALHGL-FSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWK 399
+SP+ L FS SDVF+ G + E + + + +++
Sbjct: 203 PEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII---------- 252
Query: 400 DDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
W++ N + M K + L C +RPT ++++ M++
Sbjct: 253 ----WQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRL 70
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ +
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKL 118
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR
Sbjct: 119 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----- 169
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 170 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V +N VA+K++S Q + E+ ++ + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 136
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V +N VA+K++S Q + E+ ++ + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 134
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNK--SGQGVEEFKNEMILIAKLHHRNLVRLF 226
+LG+G F V + K+ G+E A K ++ K S + ++ + E + L H N+VRL
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
E+G L+++ + +G ++ D ++ I+ I +
Sbjct: 70 DSISEEGFHYLVFDLV---------------TGGELFEDIVAREYYSEADASHCIQQILE 114
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMN---PKISDFGIARMFGGDELQSNMNRIVGT 343
+ + H ++HRDLK N+LL K++DFG+A GD Q GT
Sbjct: 115 SVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD--QQAWFGFAGT 169
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLL 370
GY+SPE + D+++ GV+L
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR D
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDD 177
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
E M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 178 E----MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 37/216 (17%)
Query: 172 LGEGGFGPV-----YKGKLLNGEEVAVKRLSN---KSGQGVEEFKNEMILIAKLHHRNLV 223
LGEG FG V YK + ++VA+K +S K + E+ + L H +++
Sbjct: 17 LGEGSFGKVKLATHYKTQ----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+L+ + +++ EY + LFDY M D R +
Sbjct: 73 KLYDVITTPTDIVMVIEYAGGE-----LFDYIVEKK-RMTEDEGR----------RFFQQ 116
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIAR-MFGGDELQSNMNRIVG 342
I + Y H R +++HRDLK N+LLD ++N KI+DFG++ M G+ L+++ G
Sbjct: 117 IICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS----CG 169
Query: 343 TYGYMSPEYALHGLFS-IKSDVFSFGVLLLETLSSK 377
+ Y +PE L++ + DV+S G++L L +
Sbjct: 170 SPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V +N VA+K++S Q + E+ ++ + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 134
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLE 99
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSN 156
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S GV
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGV 213
Query: 369 LLLETL 374
++ E +
Sbjct: 214 IMGEMI 219
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 92 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 138
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 139 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDE----MTGYVAT 190
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V +N VA+K++S Q + E+ ++ + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 134
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 27/207 (13%)
Query: 171 KLGEGGFGPVY-KGKLLNGEEVAVKRLS-NKSGQGVEEFKNEMILIAKLHHRNLVRLFGC 228
KLG G FG V+ + +G E +K ++ ++S +E+ + E+ ++ L H N++++F
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKG-ILDWTTRVRIIEGIAQG 287
+ ++ E L + + ++G L +++ +
Sbjct: 89 FEDYHNMYIVMETCEGGEL------------LERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFGGDELQSNMNRIVGT 343
L Y H V+H+DLK N+L D +P KI DFG+A +F DE +N GT
Sbjct: 137 LAYFHSQ---HVVHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSDEHSTNA---AGT 189
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLL 370
YM+PE + + K D++S GV++
Sbjct: 190 ALYMAPEVFKRDV-TFKCDIWSAGVVM 215
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query: 172 LGEGGFGPVYK------GKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRL 225
+G+G F V + G+ + V V + ++ G E+ K E + L H ++V L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G +++E+M L F + + +GF AS + I
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVK-RADAGFVYSEAVAS----------HYMRQIL 140
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP---KISDFGIARMFGGDELQSNMNRIVG 342
+ L Y H + +IHRD+K NVLL N K+ DFG+A G L + VG
Sbjct: 141 EALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR--VG 195
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
T +M+PE + DV+ GV+L LS
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 94 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 140
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 141 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 192
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 85
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 86 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR
Sbjct: 134 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----- 184
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 185 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V +N VA+K++S Q + E+ ++ + H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 142
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 143 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V +N VA+K++S Q + E+ ++ + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 134
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGV-EEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V +N VA+K++S Q + E+ ++ + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 134
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 85
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 86 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR
Sbjct: 134 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----- 184
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 185 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR D
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDD 177
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
E M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 178 E----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 92 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 138
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 139 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 190
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 27 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 85
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 86 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 132
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 133 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 184
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 185 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 71
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 72 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 119
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR
Sbjct: 120 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----- 170
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 171 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 71
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 72 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 119
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR
Sbjct: 120 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----- 170
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 171 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 14 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 72
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 73 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 120
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR
Sbjct: 121 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----- 171
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 172 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 76
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 77 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR
Sbjct: 125 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----- 175
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 176 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 93 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 139
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 140 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 191
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 89 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 135
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 136 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 187
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 70
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR
Sbjct: 119 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----- 169
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 170 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 79
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 80 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR D
Sbjct: 128 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDD 182
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
E M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 183 E----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLE 99
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSN 156
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S GV
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGV 213
Query: 369 LLLETL 374
++ E +
Sbjct: 214 IMGEMI 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 99 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 145
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR M V T
Sbjct: 146 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVAT 197
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 99 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 145
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR M V T
Sbjct: 146 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVAT 197
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 29/231 (12%)
Query: 162 ATHNFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNK---SGQGVEEFKNEMILIAKL 217
+ +F LG G FG V+ + NG A+K L + + VE +E ++++ +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 218 HHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTR 277
H ++R++G + + +I +Y+ L L + S F +P +K
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL---RKSQRF---PNPVAKFY------ 111
Query: 278 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM 337
+ L YLH +I+RDLK N+LLD + + KI+DFG A+ +
Sbjct: 112 ---AAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVT 160
Query: 338 NRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSL 388
+ GT Y++PE ++ D +SFG+L+ E L+ T FY+ +++
Sbjct: 161 YXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY--TPFYDSNTM 209
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 34/232 (14%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 93 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 139
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 140 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 191
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSKKNTRFY---NIDSLTLL 391
Y +PE L+ + ++ D++S G ++ E L+ + T F +ID L L+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQLKLI 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 39 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 97
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 98 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR
Sbjct: 146 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----- 196
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 197 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 93 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 139
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 140 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDE----MTGYVAT 191
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ S+ + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+ R DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V +N VA+K++S Q + E+ ++ + H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 154
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 89 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 135
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 136 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MTGYVAT 187
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 34/244 (13%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 94
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 95 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR
Sbjct: 143 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----- 193
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSKKNTRFY---NIDS 387
M V T Y +PE L+ + ++ D++S G ++ E L+ + T F +ID
Sbjct: 194 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQ 251
Query: 388 LTLL 391
L L+
Sbjct: 252 LKLI 255
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 29/221 (13%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFK-NEMILIAKLHHRNLVRLFGCC 229
K+G G +G VYK K +G++ L G G+ E+ L+ +L H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT-DPASKGILDWTTRVRIIEGIAQGL 288
+ ++ + + LFDY + ++ ASK V++ G+ + L
Sbjct: 88 LSHADRKV-----------WLLFDYAEHDLWHIIKFHRASKAN---KKPVQLPRGMVKSL 133
Query: 289 LY-----LHQYSRLRVIHRDLKASNVLLDGDMNP-----KISDFGIARMFGGD-ELQSNM 337
LY +H V+HRDLK +N+L+ G+ P KI+D G AR+F + +++
Sbjct: 134 LYQILDGIHYLHANWVLHRDLKPANILVMGE-GPERGRVKIADMGFARLFNSPLKPLADL 192
Query: 338 NRIVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
+ +V T+ Y +PE L K+ D+++ G + E L+S+
Sbjct: 193 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 37/221 (16%)
Query: 171 KLGEGGFGPVYKGKLLNGEEVAVKRL-SNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
++G+G +G V+ GK GE+VAVK + + E E+ + H N++
Sbjct: 44 QIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAAD 100
Query: 230 IE----QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
I+ + LI +Y N SL +DY S+ D +K +L ++
Sbjct: 101 IKGTGSWTQLYLITDYHENGSL----YDYLKSTTLD------AKSML------KLAYSSV 144
Query: 286 QGLLYLHQ-----YSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD--ELQSNMN 338
GL +LH + + HRDLK+ N+L+ + I+D G+A F D E+ N
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPN 204
Query: 339 RIVGTYGYMSPEYALHGLFS------IKSDVFSFGVLLLET 373
VGT YM PE L I +D++SFG++L E
Sbjct: 205 TRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 153 FFSLA---SISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLSN--KSGQGV 204
F+S+ S T + +G G G V Y L VA+K+LS ++
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E++L+ ++H+N++ L + P K+L+ F Y D
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 115
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ LD ++ + G+ +LH +IHRDLK SN+++ D KI DFG+
Sbjct: 116 XQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 325 ARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
AR G + M V T Y +PE L + D++S G ++ E + K
Sbjct: 173 ARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 35 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 93
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 94 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR
Sbjct: 142 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----- 192
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 193 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 153 FFSLA---SISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLSN--KSGQGV 204
F+S+ S T + +G G G V Y L VA+K+LS ++
Sbjct: 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 60
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E++L+ ++H+N++ L + P K+L+ F Y D
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 108
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ LD ++ + G+ +LH +IHRDLK SN+++ D KI DFG+
Sbjct: 109 XQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 165
Query: 325 ARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
AR G + M V T Y +PE L + D++S G ++ E + K
Sbjct: 166 ARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 89 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 135
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 136 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDE----MTGYVAT 187
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 153 FFSLA---SISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLSN--KSGQGV 204
F+S+ S T + +G G G V Y L VA+K+LS ++
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E++L+ ++H+N++ L + P K+L+ F Y D
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 115
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ LD ++ + G+ +LH +IHRDLK SN+++ D KI DFG+
Sbjct: 116 XQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 325 ARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
AR G + M V T Y +PE L + D++S G ++ E + K
Sbjct: 173 ARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 92/205 (44%), Gaps = 30/205 (14%)
Query: 172 LGEGGFGP--VYKGKLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGC 228
+G G FG + + K N E VAVK + + G+ ++E K E+I L H N+VR
Sbjct: 27 IGAGNFGVARLMRDKQAN-ELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
+ ++ EY +SG ++ + G + + G+
Sbjct: 84 ILTPTHLAIVMEY---------------ASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDGDMNP--KISDFGIARMFGGDELQSNMNRIVGTYGY 346
Y H ++V HRDLK N LLDG P KI+DFG ++ L S VGT Y
Sbjct: 129 SYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAY 182
Query: 347 MSPEYALHGLFSIK-SDVFSFGVLL 370
++PE L + K +DV+S GV L
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V +N VA+K++S Q + E+ ++ + H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + + ++ L YK + D + I
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADL------YKLLKTQHLSNDHIC----------YFLYQIL 154
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 51 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 109
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 110 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 156
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DFG+AR DE M V T
Sbjct: 157 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE----MXGYVAT 208
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 165 NFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSN--KSGQGVEEFKNEMILIAKLHHRN 221
+ +G G +G V +GE+VA+K+LS +S + E++L+ + H N
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTR--VR 279
++ L + P SL F +D+ F M TD ++++
Sbjct: 103 VIGLLDV------------FTPASSLRNF-YDFYLVMPF-MQTDLQKIMGMEFSEEKIQY 148
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ + +GL Y+H V+HRDLK N+ ++ D KI DFG+AR + M
Sbjct: 149 LVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTG 200
Query: 340 IVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
V T Y +PE L + ++ D++S G ++ E L+ K
Sbjct: 201 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 101/242 (41%), Gaps = 25/242 (10%)
Query: 141 AAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLS 197
A+K K ++ S T + +G G G V Y L VA+K+LS
Sbjct: 1 ASKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLS 58
Query: 198 N--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYK 255
++ + E++L+ ++H+N++ L + P K+L+ F Y
Sbjct: 59 RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYL 106
Query: 256 YSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDM 315
D + LD ++ + G+ +LH +IHRDLK SN+++ D
Sbjct: 107 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 163
Query: 316 NPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
KI DFG+AR G + M V T Y +PE L + D++S G ++ E +
Sbjct: 164 TLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 376 SK 377
K
Sbjct: 221 HK 222
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V +N VA+K++S Q + E+ ++ H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHIC----------YFLYQIL 136
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 26/210 (12%)
Query: 172 LGEGGFGPVYKGKLLNGEEV----AVKRLSNKSGQGVEEFKNEM--ILIAKLHHRNLVRL 225
LG+G FG V+ K ++G + A+K L + + + + +M ++ +++H +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
+G+ LI LDF G D+ T SK ++ V+ +A
Sbjct: 92 HYAFQTEGKLYLI--------LDFL-------RGGDLFTR-LSKEVMFTEEDVKFY--LA 133
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
+ L L L +I+RDLK N+LLD + + K++DFG+++ + + GT
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVE 191
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
YM+PE + +D +SFGVL+ E L+
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 101/242 (41%), Gaps = 25/242 (10%)
Query: 141 AAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLS 197
A+K K ++ S T + +G G G V Y L VA+K+LS
Sbjct: 2 ASKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLS 59
Query: 198 N--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYK 255
++ + E++L+ ++H+N++ L + P K+L+ F Y
Sbjct: 60 RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYL 107
Query: 256 YSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDM 315
D + LD ++ + G+ +LH +IHRDLK SN+++ D
Sbjct: 108 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 164
Query: 316 NPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
KI DFG+AR G + M V T Y +PE L + D++S G ++ E +
Sbjct: 165 TLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 221
Query: 376 SK 377
K
Sbjct: 222 HK 223
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 153 FFSLA---SISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLSN--KSGQGV 204
F+S+ S T + +G G G V Y L VA+K+LS ++
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E++L+ ++H+N++ L + P K+L+ F Y D
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 115
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ LD ++ + G+ +LH +IHRDLK SN+++ D KI DFG+
Sbjct: 116 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 325 ARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
AR G + M V T Y +PE L + D++S G ++ E + K
Sbjct: 173 ARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI D+G+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 133/343 (38%), Gaps = 84/343 (24%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 87
Query: 222 LVRLFGCCIEQ-GEKILIYE---------YMPNKSLDFFLFDYK---------------- 255
+V L G C + G ++I E Y+ +K +F + K
Sbjct: 88 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147
Query: 256 ---------------YSSGF-------DMVTDPASKGIL-DWTTRVRII---EGIAQGLL 289
SSGF D+ + A + + D+ T +I +A+G+
Sbjct: 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 207
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
+L + + IHRDL A N+LL KI DFG+AR D +M+P
Sbjct: 208 FL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 264
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAW--KLL 407
E +++I+SDV+SFGVLL E S L + K D + +L
Sbjct: 265 ETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPYPGVKIDEEFCRRLK 310
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
+ T Y + Y + L C + RPT SE+V + N
Sbjct: 311 EGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 352
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 165 NFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSN--KSGQGVEEFKNEMILIAKLHHRN 221
+ +G G +G V +GE+VA+K+LS +S + E++L+ + H N
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 222 LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTR--VR 279
++ L + P SL F +D+ F M TD L ++
Sbjct: 85 VIGLLDV------------FTPASSLRNF-YDFYLVMPF-MQTDLQKIMGLKFSEEKIQY 130
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNR 339
++ + +GL Y+H V+HRDLK N+ ++ D KI DFG+AR + M
Sbjct: 131 LVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTG 182
Query: 340 IVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
V T Y +PE L + ++ D++S G ++ E L+ K
Sbjct: 183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 133/343 (38%), Gaps = 84/343 (24%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 92
Query: 222 LVRLFGCCIEQ-GEKILIYE---------YMPNKSLDFFLFDYK---------------- 255
+V L G C + G ++I E Y+ +K +F + K
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 152
Query: 256 ---------------YSSGF-------DMVTDPASKGIL-DWTTRVRII---EGIAQGLL 289
SSGF D+ + A + + D+ T +I +A+G+
Sbjct: 153 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 212
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
+L + + IHRDL A N+LL KI DFG+AR D +M+P
Sbjct: 213 FL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 269
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAW--KLL 407
E +++I+SDV+SFGVLL E S L + K D + +L
Sbjct: 270 ETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPYPGVKIDEEFCRRLK 315
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
+ T Y + Y + L C + RPT SE+V + N
Sbjct: 316 EGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 357
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 133/343 (38%), Gaps = 84/343 (24%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 94
Query: 222 LVRLFGCCIEQ-GEKILIYE---------YMPNKSLDFFLFDYK---------------- 255
+V L G C + G ++I E Y+ +K +F + K
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 154
Query: 256 ---------------YSSGF-------DMVTDPASKGIL-DWTTRVRII---EGIAQGLL 289
SSGF D+ + A + + D+ T +I +A+G+
Sbjct: 155 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 214
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
+L + + IHRDL A N+LL KI DFG+AR D +M+P
Sbjct: 215 FL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 271
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAW--KLL 407
E +++I+SDV+SFGVLL E S L + K D + +L
Sbjct: 272 ETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPYPGVKIDEEFCRRLK 317
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
+ T Y + Y + L C + RPT SE+V + N
Sbjct: 318 EGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 359
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 172 LGEGGFGP--VYKGKLLNGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLFGC 228
+G G FG + + KL E VAVK + + G ++E + E+I L H N+VR
Sbjct: 28 IGSGNFGVARLMRDKL-TKELVAVKYI--ERGAAIDENVQREIINHRSLRHPNIVRFKEV 84
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
+ +I EY +SG ++ + G + + G+
Sbjct: 85 ILTPTHLAIIMEY---------------ASGGELYERICNAGRFSEDEARFFFQQLLSGV 129
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDGDMNP--KISDFGIARMFGGDELQSNMNRIVGTYGY 346
Y H +++ HRDLK N LLDG P KI DFG ++ L S VGT Y
Sbjct: 130 SYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAY 183
Query: 347 MSPEYALHGLFSIK-SDVFSFGVLL 370
++PE L + K +DV+S GV L
Sbjct: 184 IAPEVLLRQEYDGKIADVWSCGVTL 208
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 133/343 (38%), Gaps = 84/343 (24%)
Query: 172 LGEGGFGPVYKG------KLLNGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHHRN 221
LG G FG V + K VAVK L K G E + M ILI HH N
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 85
Query: 222 LVRLFGCCIEQ-GEKILIYE---------YMPNKSLDFFLFDYK---------------- 255
+V L G C + G ++I E Y+ +K +F + K
Sbjct: 86 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 145
Query: 256 ---------------YSSGF-------DMVTDPASKGIL-DWTTRVRII---EGIAQGLL 289
SSGF D+ + A + + D+ T +I +A+G+
Sbjct: 146 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 205
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
+L + + IHRDL A N+LL KI DFG+AR D +M+P
Sbjct: 206 FL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 262
Query: 350 EYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKDDRAW--KLL 407
E +++I+SDV+SFGVLL E S L + K D + +L
Sbjct: 263 ETIFDRVYTIQSDVWSFGVLLWEIFS--------------LGASPYPGVKIDEEFCRRLK 308
Query: 408 DPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVSMIKN 450
+ T Y + Y + L C + RPT SE+V + N
Sbjct: 309 EGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSELVEHLGN 350
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 21/234 (8%)
Query: 142 AKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSN-- 198
+K K ++ S T + + +G G G V + G VAVK+LS
Sbjct: 2 SKSKVDNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF 61
Query: 199 KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS 258
++ + E++L+ ++H+N++ L + P K+L+ F Y
Sbjct: 62 QNQTHAKRAYRELVLLKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVME 109
Query: 259 GFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPK 318
D LD ++ + G+ +LH +IHRDLK SN+++ D K
Sbjct: 110 LMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 166
Query: 319 ISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
I DFG+AR + + M V T Y +PE L ++ D++S G ++ E
Sbjct: 167 ILDFGLARTACTNFM---MTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGE 217
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 18/135 (13%)
Query: 249 FFLFDY-KYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKAS 307
F +FD K FD +T+ K L +I+ + + + LH +L ++HRDLK
Sbjct: 100 FLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPE 153
Query: 308 NVLLDGDMNPKISDFGIA-RMFGGDELQSNMNRIVGTYGYMSPEYAL------HGLFSIK 360
N+LLD DMN K++DFG + ++ G++L+S + GT Y++PE H + +
Sbjct: 154 NILLDDDMNIKLTDFGFSCQLDPGEKLRS----VCGTPSYLAPEIIECSMNDNHPGYGKE 209
Query: 361 SDVFSFGVLLLETLS 375
D++S GV++ L+
Sbjct: 210 VDMWSTGVIMYTLLA 224
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 28/211 (13%)
Query: 172 LGEGGFGPVYKGKLL----NGEEVAVKRLSNKSGQGVEEFKNEM--ILIAKLHHRNLVRL 225
LG+G FG V+ + + +G A+K L + + + + +M ++A ++H +V+L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI-IEGI 284
+G+ LI LDF G D+ T SK ++ V+ + +
Sbjct: 96 HYAFQTEGKLYLI--------LDFL-------RGGDLFTR-LSKEVMFTEEDVKFYLAEL 139
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
A GL +LH L +I+RDLK N+LLD + + K++DFG+++ + + GT
Sbjct: 140 ALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTV 194
Query: 345 GYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
YM+PE S +D +S+GVL+ E L+
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLT 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQG-VEEFKNEMILIAKLHHRNLV----RL 225
+GEG +G V +N VA+K++S Q + E+ ++ H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
IEQ + + I + + L YK + D + I
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDL------YKLLKTQHLSNDHI----------CYFLYQIL 136
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVGTY 344
+GL Y+H + V+HRDLK SN+LL+ + KI DFG+AR+ D + + V T
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 345 GYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
Y +PE L+ KS D++S G +L E LS++
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 245 KSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDL 304
+++D F +Y +G D++ G V I+ GL +LH+ +I+RDL
Sbjct: 90 QTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG---IIYRDL 146
Query: 305 KASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVF 364
K NV+LD + + KI+DFG+ + D + + GT Y++PE + + D +
Sbjct: 147 KLDNVMLDSEGHIKIADFGMCKEHMMDGVTT--REFCGTPDYIAPEIIAYQPYGKSVDWW 204
Query: 365 SFGVLLLETLSSK 377
++GVLL E L+ +
Sbjct: 205 AYGVLLYEMLAGQ 217
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 26/210 (12%)
Query: 172 LGEGGFGPVYKGKLLNGEEV----AVKRLSNKSGQGVEEFKNEM--ILIAKLHHRNLVRL 225
LG+G FG V+ K ++G + A+K L + + + + +M ++ +++H +V+L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
+G+ LI LDF G D+ T SK ++ V+ +A
Sbjct: 93 HYAFQTEGKLYLI--------LDFL-------RGGDLFTR-LSKEVMFTEEDVKFY--LA 134
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
+ L L L +I+RDLK N+LLD + + K++DFG+++ + + GT
Sbjct: 135 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVE 192
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
YM+PE + +D +SFGVL+ E L+
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLT 222
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 34/207 (16%)
Query: 172 LGEGGFGPVYKGKLL----NGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLF 226
+G G FG +L+ + E VAVK + + G+ ++E K E+I L H N+VR
Sbjct: 26 IGSGNFG---VARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFK 80
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
+ ++ EY +SG ++ + G + +
Sbjct: 81 EVILTPTHLAIVMEY---------------ASGGELFERICNAGRFSEDEARFFFQQLIS 125
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNP--KISDFGIARMFGGDELQSNMNRIVGTY 344
G+ Y H ++V HRDLK N LLDG P KI DFG ++ L S VGT
Sbjct: 126 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTP 179
Query: 345 GYMSPEYALHGLFSIK-SDVFSFGVLL 370
Y++PE L + K +DV+S GV L
Sbjct: 180 AYIAPEVLLKKEYDGKVADVWSCGVTL 206
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 26/210 (12%)
Query: 172 LGEGGFGPVYKGKLLNGEEV----AVKRLSNKSGQGVEEFKNEM--ILIAKLHHRNLVRL 225
LG+G FG V+ K ++G + A+K L + + + + +M ++ +++H +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
+G+ LI LDF G D+ T SK ++ V+ +A
Sbjct: 92 HYAFQTEGKLYLI--------LDFL-------RGGDLFTR-LSKEVMFTEEDVKFY--LA 133
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
+ L L L +I+RDLK N+LLD + + K++DFG+++ + + GT
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVE 191
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
YM+PE + +D +SFGVL+ E L+
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 156 LASISTATHNFSEENKLGEGGFGPVYKGKLL-NGEEVAVKRLSNKSG-QGVEEFKNEMIL 213
+ S ST+ H + + LG+G V++G+ G+ A+K +N S + V+ E +
Sbjct: 1 MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV 60
Query: 214 IAKLHHRNLVRLFGCCIEQG--EKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGI 271
+ KL+H+N+V+LF E K+LI E+ P SL + ++ +P++
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL------------YTVLEEPSNAYG 108
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARM 327
L + + ++ + G+ +L + ++HR++K N++ DG K++DFG AR
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165
Query: 328 FGGDELQSNMNRIVGTYGYMSPE 350
DE + GT Y+ P+
Sbjct: 166 LEDDE---QFVXLYGTEEYLHPD 185
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 153 FFSLA---SISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLSN--KSGQGV 204
F+S+ S T + +G G G V Y L VA+K+LS ++
Sbjct: 48 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 105
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E++L+ ++H+N++ L + P K+L+ F Y D
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 153
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ LD ++ + G+ +LH +IHRDLK SN+++ D KI DFG+
Sbjct: 154 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 210
Query: 325 ARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
AR G + M V T Y +PE L + D++S G ++ E + K
Sbjct: 211 ARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLE 99
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSN 156
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S G
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 369 LLLETL 374
++ E +
Sbjct: 214 IMGEMI 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 153 FFSLA---SISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLSN--KSGQGV 204
F+S+ S T + +G G G V Y L VA+K+LS ++
Sbjct: 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 60
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E++L+ ++H+N++ L + P K+L+ F Y D
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 108
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ LD ++ + G+ +LH +IHRDLK SN+++ D KI DFG+
Sbjct: 109 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 165
Query: 325 ARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
AR G + M V T Y +PE L + D++S G ++ E + K
Sbjct: 166 ARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGK-----LLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + L + KR + S +GV E+ + E+ ++ ++ H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + ILI E + L FL A K L ++
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---------------AEKESLTEEEATEFLKQ 122
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFG-GDELQSNMN 338
I G+ YLH L++ H DLK N++L P KI DFG+A G+E ++
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 177 -IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 153 FFSLA---SISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLSN--KSGQGV 204
F+S+ S T + +G G G V Y L VA+K+LS ++
Sbjct: 48 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 105
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E++L+ ++H+N++ L + P K+L+ F Y D
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 153
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ LD ++ + G+ +LH +IHRDLK SN+++ D KI DFG+
Sbjct: 154 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 210
Query: 325 ARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
AR G + M V T Y +PE L + D++S G ++ E + K
Sbjct: 211 ARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 153 FFSLA---SISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLSN--KSGQGV 204
F+S+ S T + +G G G V Y L VA+K+LS ++
Sbjct: 9 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 66
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E++L+ ++H+N++ L + P K+L+ F Y D
Sbjct: 67 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 114
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ LD ++ + G+ +LH +IHRDLK SN+++ D KI DFG+
Sbjct: 115 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 171
Query: 325 ARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
AR G + M V T Y +PE L + D++S G ++ E + K
Sbjct: 172 ARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 156 LASISTATHNFSEENKLGEGGFGPVYKGKLL-NGEEVAVKRLSNKSG-QGVEEFKNEMIL 213
+ S ST+ H + + LG+G V++G+ G+ A+K +N S + V+ E +
Sbjct: 1 MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV 60
Query: 214 IAKLHHRNLVRLFGCCIEQG--EKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGI 271
+ KL+H+N+V+LF E K+LI E+ P SL + ++ +P++
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL------------YTVLEEPSNAYG 108
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL----DGDMNPKISDFGIARM 327
L + + ++ + G+ +L + ++HR++K N++ DG K++DFG AR
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165
Query: 328 FGGDELQSNMNRIVGTYGYMSPE 350
DE + GT Y+ P+
Sbjct: 166 LEDDE---QFVSLYGTEEYLHPD 185
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 153 FFSLA---SISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLSN--KSGQGV 204
F+S+ S T + +G G G V Y L VA+K+LS ++
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E++L+ ++H+N++ L + P K+L+ F Y D
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 115
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ LD ++ + G+ +LH +IHRDLK SN+++ D KI DFG+
Sbjct: 116 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
Query: 325 ARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
AR G + M V T Y +PE L + D++S G ++ E + K
Sbjct: 173 ARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 153 FFSLA---SISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLSN--KSGQGV 204
F+S+ S T + +G G G V Y L VA+K+LS ++
Sbjct: 4 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 61
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E++L+ ++H+N++ L + P K+L+ F Y D
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 109
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ LD ++ + G+ +LH +IHRDLK SN+++ D KI DFG+
Sbjct: 110 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 166
Query: 325 ARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
AR G + M V T Y +PE L + D++S G ++ E + K
Sbjct: 167 ARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 153 FFSLA---SISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLSN--KSGQGV 204
F+S+ S T + +G G G V Y L VA+K+LS ++
Sbjct: 11 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 68
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E++L+ ++H+N++ L + P K+L+ F Y D
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 116
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ LD ++ + G+ +LH +IHRDLK SN+++ D KI DFG+
Sbjct: 117 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 173
Query: 325 ARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
AR G + M V T Y +PE L + D++S G ++ E + K
Sbjct: 174 ARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 153 FFSLA---SISTATHNFSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLSN--KSGQGV 204
F+S+ S T + +G G G V Y L VA+K+LS ++
Sbjct: 4 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 61
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E++L+ ++H+N++ L + P K+L+ F Y D
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 109
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGI 324
+ LD ++ + G+ +LH +IHRDLK SN+++ D KI DFG+
Sbjct: 110 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 166
Query: 325 ARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
AR G + M V T Y +PE L + D++S G ++ E + K
Sbjct: 167 ARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI DF +AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 166 FSEENKLGEGGFGPVYKGKLLNGEE-VAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
F E++LG G VY+ K ++ A+K L + + + E+ ++ +L H N+++
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI--VRTEIGVLLRLSHPNIIK 112
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
L E L+ E + L FD G+ D A ++ I
Sbjct: 113 LKEIFETPTEISLVLELVTGGEL----FDRIVEKGYYSERDAADA-----------VKQI 157
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDG---DMNPKISDFGIARMFGGDELQSNMNRIV 341
+ + YLH+ ++HRDLK N+L D KI+DFG++++ E Q M +
Sbjct: 158 LEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVC 211
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVL 369
GT GY +PE + + D++S G++
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGII 239
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 46/286 (16%)
Query: 171 KLGEGGFGPVYKGKLLNGE---EVAVKRLSNK--SGQGVEEFKNEMILIAKLHHRNLVRL 225
++G G F VYKG L+ E EVA L ++ + + FK E + L H N+VR
Sbjct: 33 EIGRGSFKTVYKG--LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRF 90
Query: 226 FGC--CIEQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+ +G+K +L+ E + +L +L +K K + W +
Sbjct: 91 YDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXK---------IKVLRSWCRQ---- 137
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQSNMNRI 340
I +GL +LH + +IHRDLK N+ + G KI D G+A + + S +
Sbjct: 138 --ILKGLQFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAV 190
Query: 341 VGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWKD 400
+GT + +PE + DV++FG LE +S+ + +A +++
Sbjct: 191 IGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEY--------PYSECQNAAQIYR- 240
Query: 401 DRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEVVS 446
R + P ++ P VK I+ C+++N +R ++ ++++
Sbjct: 241 -RVTSGVKPASFDKVAIPEVKEIIEG---CIRQNKDERYSIKDLLN 282
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 33/287 (11%)
Query: 144 GKSKESWFIFFSLA-SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSN--K 199
G +S F +A S T + + +G G G V + G VAVK+LS +
Sbjct: 1 GSHMDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ 60
Query: 200 SGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSG 259
+ + E++L+ ++H+N++ L + P K+L+ F Y
Sbjct: 61 NQTHAKRAYRELVLLKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMEL 108
Query: 260 FDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKI 319
D LD ++ + G+ +LH +IHRDLK SN+++ D KI
Sbjct: 109 MDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKI 165
Query: 320 SDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKN 379
DFG+AR + + M V T Y +PE L + D++S G ++ E + K +
Sbjct: 166 LDFGLARTASTNFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV--KGS 220
Query: 380 TRFYNIDSLTLLGHAWNLWKDDRAWKLLDPTLQ-NEALYPMVKRYIK 425
F D + WN + +L P+ + AL P V+ Y++
Sbjct: 221 VIFQGTDHID----QWNKVIE----QLGTPSAEFMAALQPTVRNYVE 259
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLE 99
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S G
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 369 LLLETL 374
++ E +
Sbjct: 214 IMGEMI 219
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 171 KLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
+LG G F V + G+E A K L K + ++ + E+ LH ++ L C
Sbjct: 36 ELGRGKFAVVRQCISKSTGQEYAAKFL--KKRRRGQDCRAEI-----LHEIAVLELAKSC 88
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
I ++E N S + +Y + P ++ +R+I+ I +G+
Sbjct: 89 ---PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVY 145
Query: 290 YLHQYSRLRVIHRDLKASNVLLD-----GDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
YLHQ + ++H DLK N+LL GD+ KI DFG++R G + I+GT
Sbjct: 146 YLHQNN---IVHLDLKPQNILLSSIYPLGDI--KIVDFGMSRKIGH---ACELREIMGTP 197
Query: 345 GYMSPEYALHGLFSIKSDVFSFGVL 369
Y++PE + + +D+++ G++
Sbjct: 198 EYLAPEILNYDPITTATDMWNIGII 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 99
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S G
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 369 LLLETL 374
++ E +
Sbjct: 214 IMGEMI 219
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 172 LGEGGFGPVYKGKLLN-GEEVAVKR-LSNKSGQGVEEFK-NEMILIAKLHHRNLVRLFGC 228
+GEG +G V K + + G VA+K+ L + + V++ E+ L+ +L H NLV L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 229 CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
C ++ L++E++ + LD D+ P LD+ + + I G+
Sbjct: 93 CKKKKRWYLVFEFVDHTILD------------DLELFPNG---LDYQVVQKYLFQIINGI 137
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMS 348
+ H ++ +IHRD+K N+L+ K+ DFG AR + V T Y +
Sbjct: 138 GFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAP--GEVYDDEVATRWYRA 192
Query: 349 PEYALHGL-FSIKSDVFSFGVLLLE 372
PE + + + DV++ G L+ E
Sbjct: 193 PELLVGDVKYGKAVDVWAIGCLVTE 217
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 16/134 (11%)
Query: 249 FFLFDY-KYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKAS 307
F +FD K FD +T+ K L +I+ + + + LH +L ++HRDLK
Sbjct: 87 FLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPE 140
Query: 308 NVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYAL------HGLFSIKS 361
N+LLD DMN K++DFG + E + + GT Y++PE H + +
Sbjct: 141 NILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEV 197
Query: 362 DVFSFGVLLLETLS 375
D++S GV++ L+
Sbjct: 198 DMWSTGVIMYTLLA 211
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 99
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S G
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 369 LLLETL 374
++ E +
Sbjct: 214 IMGEMI 219
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 16/134 (11%)
Query: 249 FFLFDY-KYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKAS 307
F +FD K FD +T+ K L +I+ + + + LH +L ++HRDLK
Sbjct: 100 FLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPE 153
Query: 308 NVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYAL------HGLFSIKS 361
N+LLD DMN K++DFG + E + + GT Y++PE H + +
Sbjct: 154 NILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEV 210
Query: 362 DVFSFGVLLLETLS 375
D++S GV++ L+
Sbjct: 211 DMWSTGVIMYTLLA 224
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 24/210 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKS----GQGVEEFKNEMILIAKLHHRNLVRLFG 227
LG+GGF ++ + +EV ++ KS E+ E+ + L H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ ++ E +SL + +T+P ++ L I G
Sbjct: 107 FFEDNDFVFVVLELCRRRSL------LELHKRRKALTEPEARYYL---------RQIVLG 151
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
YLH R RVIHRDLK N+ L+ D+ KI DFG+A D + + + GT Y+
Sbjct: 152 CQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYI 206
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+PE S + DV+S G ++ L K
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 24/210 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKS----GQGVEEFKNEMILIAKLHHRNLVRLFG 227
LG+GGF ++ + +EV ++ KS E+ E+ + L H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ ++ E +SL + +T+P ++ L I G
Sbjct: 83 FFEDNDFVFVVLELCRRRSL------LELHKRRKALTEPEARYYL---------RQIVLG 127
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
YLH R RVIHRDLK N+ L+ D+ KI DFG+A D + + + GT Y+
Sbjct: 128 CQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYI 182
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+PE S + DV+S G ++ L K
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 20/189 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 104
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 105 EFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 161
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S G
Sbjct: 162 IVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDLWSVGC 218
Query: 369 LLLETLSSK 377
++ E + K
Sbjct: 219 IMGEMVCHK 227
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 20/189 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 99
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S G
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFM---MEPEVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 369 LLLETLSSK 377
++ E + K
Sbjct: 214 IMGEMVCHK 222
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 20/189 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 93
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 94 EFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 150
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S G
Sbjct: 151 IVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDLWSVGC 207
Query: 369 LLLETLSSK 377
++ E + K
Sbjct: 208 IMGEMVCHK 216
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 245 KSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDL 304
+++D F +Y +G D++ G V IA GL +L +I+RDL
Sbjct: 412 QTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDL 468
Query: 305 KASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVF 364
K NV+LD + + KI+DFG+ + D + + GT Y++PE + + D +
Sbjct: 469 KLDNVMLDSEGHIKIADFGMCKENIWDGVTTKX--FCGTPDYIAPEIIAYQPYGKSVDWW 526
Query: 365 SFGVLLLETLSSK 377
+FGVLL E L+ +
Sbjct: 527 AFGVLLYEMLAGQ 539
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 49/287 (17%)
Query: 171 KLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNL-----VR 224
+LG G +G V K + + +G+ AVKR+ ++ +E K ++ + R + V
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRI--RATVNSQEQKR-LLXDLDISXRTVDCPFTVT 97
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
+G +G+ + I + + SLD F + V D D ++ + I
Sbjct: 98 FYGALFREGD-VWICXELXDTSLDKF---------YKQVIDKGQTIPEDILGKIAV--SI 145
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
+ L +LH S+L VIHRD+K SNVL++ K DFGI+ D++ +++ G
Sbjct: 146 VKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL-VDDVAKDID--AGCK 200
Query: 345 GYMSPEYALHGL----FSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWNLWK- 399
Y +PE L +S+KSD++S G+ +E L +L ++ W
Sbjct: 201 PYXAPERINPELNQKGYSVKSDIWSLGITXIE---------------LAILRFPYDSWGT 245
Query: 400 --DDRAWKLLDPTLQNEALYPMVKRYIKVALLCVQENAADRPTMSEV 444
+ +P+ Q A ++ C+++N+ +RPT E+
Sbjct: 246 PFQQLKQVVEEPSPQLPA-DKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 24/210 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKS----GQGVEEFKNEMILIAKLHHRNLVRLFG 227
LG+GGF ++ + +EV ++ KS E+ E+ + L H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ ++ E +SL + +T+P ++ L I G
Sbjct: 109 FFEDNDFVFVVLELCRRRSL------LELHKRRKALTEPEARYYL---------RQIVLG 153
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
YLH R RVIHRDLK N+ L+ D+ KI DFG+A D + + + GT Y+
Sbjct: 154 CQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYI 208
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+PE S + DV+S G ++ L K
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGK-----LLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + L + KR + S +GV E+ + E+ ++ ++ H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + ILI E + L FL A K L ++
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---------------AEKESLTEEEATEFLKQ 122
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFG-GDELQSNMN 338
I G+ YLH L++ H DLK N++L P KI DFG+A G+E ++
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKS----GQGVEEFKNEMILIAKLHHRNLVRLFG 227
LG+GGF ++ + +EV ++ KS E+ E+ + L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ ++ E +SL + +T+P ++ L I G
Sbjct: 85 FFEDNDFVFVVLELCRRRSL------LELHKRRKALTEPEARYYL---------RQIVLG 129
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
YLH R RVIHRDLK N+ L+ D+ KI DFG+A D + GT Y+
Sbjct: 130 CQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKTLCGTPNYI 184
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+PE S + DV+S G ++ L K
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI D G+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKS----GQGVEEFKNEMILIAKLHHRNLVRLFG 227
LG+GGF ++ + +EV ++ KS E+ E+ + L H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ ++ E +SL + +T+P ++ L I G
Sbjct: 89 FFEDNDFVFVVLELCRRRSL------LELHKRRKALTEPEARYYL---------RQIVLG 133
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
YLH R RVIHRDLK N+ L+ D+ KI DFG+A D + GT Y+
Sbjct: 134 CQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKTLCGTPNYI 188
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+PE S + DV+S G ++ L K
Sbjct: 189 APEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 29/227 (12%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMIL 213
+I + + +G G +G V G VAVK+LS + Q + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRL 74
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGI 271
+ + H N++ L + P +SL+ F ++ + G D+ + +
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
D + +I I +GL Y+H +IHRDLK SN+ ++ D KI FG+AR D
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR-HTDD 177
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
E M V T Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 178 E----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 99
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S G
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 369 LLLETL 374
++ E +
Sbjct: 214 IMGEMI 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKS----GQGVEEFKNEMILIAKLHHRNLVRLFG 227
LG+GGF ++ + +EV ++ KS E+ E+ + L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ ++ E +SL + +T+P ++ L I G
Sbjct: 85 FFEDNDFVFVVLELCRRRSL------LELHKRRKALTEPEARYYL---------RQIVLG 129
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
YLH R RVIHRDLK N+ L+ D+ KI DFG+A D + GT Y+
Sbjct: 130 CQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKTLCGTPNYI 184
Query: 348 SPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+PE S + DV+S G ++ L K
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 100
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 101 EFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 157
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S G
Sbjct: 158 IVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 214
Query: 369 LLLETL 374
++ E +
Sbjct: 215 IMGEMI 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI D G+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGK-----LLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + L + KR + S +GV E+ + E+ ++ ++ H N++
Sbjct: 18 ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + ILI E + L FL A K L ++
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---------------AEKESLTEEEATEFLKQ 122
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFG-GDELQSNMN 338
I G+ YLH L++ H DLK N++L P KI DFG+A G+E ++
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGK-----LLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + L + KR + S +GV E+ + E+ ++ ++ H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + ILI E + L FL A K L ++
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---------------AEKESLTEEEATEFLKQ 122
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFG-GDELQSNMN 338
I G+ YLH L++ H DLK N++L P KI DFG+A G+E ++
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGK-----LLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + L + KR + S +GV E+ + E+ ++ ++ H N++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + ILI E + L FL A K L ++
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFL---------------AEKESLTEEEATEFLKQ 121
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFG-GDELQSNMN 338
I G+ YLH L++ H DLK N++L P KI DFG+A G+E ++
Sbjct: 122 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 175
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 176 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 100/238 (42%), Gaps = 40/238 (16%)
Query: 165 NFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLH 218
+F LG+G FG VY + K + +V K S +GVE + + E+ + + L
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFK--SQLEKEGVEHQLRREIEIQSHLR 72
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
H N++R++ ++ L+ E+ P L YK + G D
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGEL------YK---------ELQKHGRFDEQRSA 117
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+E +A L Y H+ +VIHRD+K N+L+ KI+DFG + L+
Sbjct: 118 TFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRX- 171
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL----------SSKKNTRFYNID 386
+ GT Y+ PE K D++ GVL E L ++ + R N+D
Sbjct: 172 -MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD 228
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 245 KSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDL 304
+++D F +Y +G D++ G V IA GL +L +I+RDL
Sbjct: 91 QTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDL 147
Query: 305 KASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVF 364
K NV+LD + + KI+DFG+ + D + + GT Y++PE + + D +
Sbjct: 148 KLDNVMLDSEGHIKIADFGMCKENIWDGVTTKX--FCGTPDYIAPEIIAYQPYGKSVDWW 205
Query: 365 SFGVLLLETLSSK 377
+FGVLL E L+ +
Sbjct: 206 AFGVLLYEMLAGQ 218
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGK-----LLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + L + KR + S +GV E+ + E+ ++ ++ H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + ILI E + L FL A K L ++
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---------------AEKESLTEEEATEFLKQ 122
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFG-GDELQSNMN 338
I G+ YLH L++ H DLK N++L P KI DFG+A G+E ++
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 28/212 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE--------EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
LG+GG+G V++ + + G +V K + ++ + K E ++ ++ H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L G+ LI EY+ SG ++ +GI T +
Sbjct: 85 DLIYAFQTGGKLYLILEYL---------------SGGELFMQLEREGIFMEDTACFYLAE 129
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ L +LHQ +I+RDLK N++L+ + K++DFG+ + D + + GT
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD--GTVTHXFCGT 184
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
YM+PE + + D +S G L+ + L+
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLT 216
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 20/189 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 99
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S G
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFM---MEPEVVTRYYRAPEVILGMGYKENVDLWSVGC 213
Query: 369 LLLETLSSK 377
++ E + K
Sbjct: 214 IMGEMVCHK 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 99
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S G
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 369 LLLETL 374
++ E +
Sbjct: 214 IMGEMI 219
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 28/212 (13%)
Query: 172 LGEGGFGPVYKGKLLNGE--------EVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
LG+GG+G V++ + + G +V K + ++ + K E ++ ++ H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L G+ LI EY+ SG ++ +GI T +
Sbjct: 85 DLIYAFQTGGKLYLILEYL---------------SGGELFMQLEREGIFMEDTACFYLAE 129
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ L +LHQ +I+RDLK N++L+ + K++DFG+ + D + + GT
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD--GTVTHTFCGT 184
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
YM+PE + + D +S G L+ + L+
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLT 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGK-----LLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + L + KR + S +GV E+ + E+ ++ ++ H N++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + ILI E + L FL A K L ++
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFL---------------AEKESLTEEEATEFLKQ 121
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFG-GDELQSNMN 338
I G+ YLH L++ H DLK N++L P KI DFG+A G+E ++
Sbjct: 122 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 175
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 176 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 165 NFSEENKLGEGGFGPVYKGKLL-NGEEVAVKRLSNKSGQGVEEFKNEM----ILIAKLHH 219
NF LG+G FG V ++ G+ AVK L ++ + M IL +H
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 220 RNLVRLFGCCIEQGEKIL-IYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
L +LF CC + +++ + E++ L +F + S FD R
Sbjct: 84 PFLTQLF-CCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFD-------------EARA 126
Query: 279 RIIEG-IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM 337
R I L++LH +I+RDLK NVLLD + + K++DFG+ + + + +
Sbjct: 127 RFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT 183
Query: 338 NRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSL 388
GT Y++PE L+ D ++ GVLL E L N D L
Sbjct: 184 --FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL 232
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGK-----LLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + L + KR + S +GV E+ + E+ ++ ++ H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + ILI E + L FL A K L ++
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---------------AEKESLTEEEATEFLKQ 122
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFG-GDELQSNMN 338
I G+ YLH L++ H DLK N++L P KI DFG+A G+E ++
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 100/238 (42%), Gaps = 40/238 (16%)
Query: 165 NFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLH 218
+F LG+G FG VY + K + +V K S +GVE + + E+ + + L
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFK--SQLEKEGVEHQLRREIEIQSHLR 72
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
H N++R++ ++ L+ E+ P L YK + G D
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGEL------YK---------ELQKHGRFDEQRSA 117
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+E +A L Y H+ +VIHRD+K N+L+ KI+DFG + L+
Sbjct: 118 TFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRX- 171
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL----------SSKKNTRFYNID 386
+ GT Y+ PE K D++ GVL E L ++ + R N+D
Sbjct: 172 -MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD 228
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSN-MNRIVG 342
I +GL Y+H + V+HRDLK SN+L++ + KI DFG+AR+ + + + V
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 343 TYGYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
T Y +PE L+ KS D++S G +L E LS++
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 101
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 102 EFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 158
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S G
Sbjct: 159 IVVKSDCTLKILDFGLARTAGTSFM---MVPFVVTRYYRAPEVILGMGYKENVDIWSVGC 215
Query: 369 LLLETL 374
++ E +
Sbjct: 216 IMGEMI 221
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 100/238 (42%), Gaps = 40/238 (16%)
Query: 165 NFSEENKLGEGGFGPVY-----KGKLLNGEEVAVKRLSNKSGQGVE-EFKNEMILIAKLH 218
+F LG+G FG VY + K + +V K S +GVE + + E+ + + L
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFK--SQLEKEGVEHQLRREIEIQSHLR 73
Query: 219 HRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRV 278
H N++R++ ++ L+ E+ P L YK + G D
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGEL------YK---------ELQKHGRFDEQRSA 118
Query: 279 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMN 338
+E +A L Y H+ +VIHRD+K N+L+ KI+DFG + L+
Sbjct: 119 TFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRX- 172
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETL----------SSKKNTRFYNID 386
+ GT Y+ PE K D++ GVL E L ++ + R N+D
Sbjct: 173 -MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD 229
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 191 VAVKRLSN--KSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLD 248
VA+K+LS ++ + E++L+ ++H+N++ L + P KSL+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 99
Query: 249 FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN 308
F Y D + LD ++ + G+ +LH +IHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 309 VLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGV 368
+++ D KI DFG+AR G + M V T Y +PE L + D++S G
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFM---MTPEVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 369 LLLETL 374
++ E +
Sbjct: 214 IMGEMI 219
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGK-----LLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + L + KR + S +GV E+ + E+ ++ ++ H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + ILI E + L FL A K L ++
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---------------AEKESLTEEEATEFLKQ 122
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFG-GDELQSNMN 338
I G+ YLH L++ H DLK N++L P KI DFG+A G+E ++
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 170 NKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN---EMILIAKLHHRNLVRL 225
+ +G G +G V G VAVK+LS + Q + K E+ L+ + H N++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFF--LFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+ P +SL+ F ++ + G D+ + + D + +I
Sbjct: 87 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 133
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I +GL Y+H +IHRDLK SN+ ++ D KI D G+AR DE M V T
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR-HTDDE----MTGYVAT 185
Query: 344 YGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
Y +PE L+ + ++ D++S G ++ E L+ +
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGK-----LLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + L + KR + S +GV E+ + E+ ++ ++ H N++
Sbjct: 18 ELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + ILI E + L FL A K L ++
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---------------AEKESLTEEEATEFLKQ 122
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFG-GDELQSNMN 338
I G+ YLH L++ H DLK N++L P KI DFG+A G+E ++
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGK-----LLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + L + KR + S +GV E+ + E+ ++ ++ H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + ILI E + L FL A K L ++
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---------------AEKESLTEEEATEFLKQ 122
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFG-GDELQSNMN 338
I G+ YLH L++ H DLK N++L P KI DFG+A G+E ++
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 24/209 (11%)
Query: 171 KLGEGGFGPVYKGKLLN-GEEVAVKR-LSNKSGQGVEEFK-NEMILIAKLHHRNLVRLFG 227
K+GEG +G V+K + + G+ VA+K+ L ++ +++ E+ ++ +L H NLV L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ L++EY + L +Y G V + K I W T Q
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHEL---DRYQRG---VPEHLVKSI-TWQT--------LQA 114
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
+ + H+++ IHRD+K N+L+ K+ DFG AR+ G + V T Y
Sbjct: 115 VNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGP--SDYYDDEVATRWYR 169
Query: 348 SPEYAL-HGLFSIKSDVFSFGVLLLETLS 375
SPE + + DV++ G + E LS
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGK-----LLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + L + KR + S +GV E+ + E+ ++ ++ H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + ILI E + L FL A K L ++
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---------------AEKESLTEEEATEFLKQ 122
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFG-GDELQSNMN 338
I G+ YLH L++ H DLK N++L P KI DFG+A G+E ++
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGK-----LLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + L + KR + S +GV E+ + E+ ++ ++ H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + ILI E + L FL A K L ++
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---------------AEKESLTEEEATEFLKQ 122
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFG-GDELQSNMN 338
I G+ YLH L++ H DLK N++L P KI DFG+A G+E ++
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGK-----LLNGEEVAVKRLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + L + KR + S +GV E+ + E+ ++ ++ H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + ILI E + L FL A K L ++
Sbjct: 78 TLHEVYENKTDVILIGELVAGGELFDFL---------------AEKESLTEEEATEFLKQ 122
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP----KISDFGIARMFG-GDELQSNMN 338
I G+ YLH L++ H DLK N++L P KI DFG+A G+E ++
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 81/202 (40%), Gaps = 24/202 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIE 231
+G G FG + E+ + + + K E+I L H N+VR +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 232 QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYL 291
++ EY +SG ++ + G + + G+ Y
Sbjct: 87 PTHLAIVMEY---------------ASGGELFERICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 292 HQYSRLRVIHRDLKASNVLLDGDMNP--KISDFGIARMFGGDELQSNMNRIVGTYGYMSP 349
H ++V HRDLK N LLDG P KI DFG ++ L S VGT Y++P
Sbjct: 132 HA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAP 185
Query: 350 EYALHGLFSIK-SDVFSFGVLL 370
E L + K +DV+S GV L
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTL 207
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 35/235 (14%)
Query: 166 FSEENKLGEGGFGPV---YKGKLLNGEEVAVKRLSN--KSGQGVEEFKNEMILIAKLHHR 220
+ + +G G +G V G+ G +VA+K+L +S + E+ L+ + H
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGR--TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 84
Query: 221 NLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
N++ L + P+++LD F D+ F M TD + RI
Sbjct: 85 NVIGLLDV------------FTPDETLDDFT-DFYLVMPF-MGTDLGKLMKHEKLGEDRI 130
Query: 281 ---IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNM 337
+ + +GL Y+H +IHRDLK N+ ++ D KI DFG+AR + S M
Sbjct: 131 QFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEM 182
Query: 338 NRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLL 391
V T Y +PE L+ + ++ D++S G ++ E ++ K T F D L L
Sbjct: 183 XGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK--TLFKGSDHLDQL 235
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 90/207 (43%), Gaps = 34/207 (16%)
Query: 172 LGEGGFGPVYKGKLL----NGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLF 226
+G G FG +L+ + E VAVK + + G+ ++E K E+I L H N+VR
Sbjct: 27 IGSGNFG---VARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFK 81
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
+ ++ EY +SG ++ + G + +
Sbjct: 82 EVILTPTHLAIVMEY---------------ASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNP--KISDFGIARMFGGDELQSNMNRIVGTY 344
G+ Y H ++V HRDLK N LLDG P KI FG ++ L S VGT
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTP 180
Query: 345 GYMSPEYALHGLFSIK-SDVFSFGVLL 370
Y++PE L + K +DV+S GV L
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 90/207 (43%), Gaps = 34/207 (16%)
Query: 172 LGEGGFGPVYKGKLL----NGEEVAVKRLSNKSGQGVEE-FKNEMILIAKLHHRNLVRLF 226
+G G FG +L+ + E VAVK + + G+ ++E K E+I L H N+VR
Sbjct: 27 IGSGNFG---VARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFK 81
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
+ ++ EY +SG ++ + G + +
Sbjct: 82 EVILTPTHLAIVMEY---------------ASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNP--KISDFGIARMFGGDELQSNMNRIVGTY 344
G+ Y H ++V HRDLK N LLDG P KI FG ++ L S VGT
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTP 180
Query: 345 GYMSPEYALHGLFSIK-SDVFSFGVLL 370
Y++PE L + K +DV+S GV L
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 32/244 (13%)
Query: 138 GDSAAKGKSKESWFIFFSLASISTATHNFSEENKLGEGGFGPVYKGKLL-NGEEVAVKRL 196
G S + GK ++ ++ ++ ++G G G V+K + G +AVK++
Sbjct: 1 GSSGSSGK--QTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQM 58
Query: 197 SNKSGQGVEEFKNEMILIAKLHHRN---LVRLFGCCIEQGEKILIYEYMPNKSLDFFLFD 253
+SG E + M L L + +V+ FG I + + E M +
Sbjct: 59 -RRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKL---- 113
Query: 254 YKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDG 313
K G P + IL ++ I + L YL + + VIHRD+K SN+LLD
Sbjct: 114 KKRMQG------PIPERILG-----KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDE 160
Query: 314 DMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEY-----ALHGLFSIKSDVFSFGV 368
K+ DFGI+ D+ + +R G YM+PE + I++DV+S G+
Sbjct: 161 RGQIKLCDFGISGRLVDDKAK---DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGI 217
Query: 369 LLLE 372
L+E
Sbjct: 218 SLVE 221
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 32/220 (14%)
Query: 163 THNFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFK-NEMILIAKLHHR 220
H + + +LG G FG V++ K G + AVK++ +E F+ E++ A L
Sbjct: 71 VHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSP 124
Query: 221 NLVRLFGCCIEQGEKILIY-EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
+V L+G + +G + I+ E + SL + G L +
Sbjct: 125 RIVPLYGA-VREGPWVNIFMELLEGGSLGQLI---------------KQMGCLPEDRALY 168
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGD-MNPKISDFGIARMFGGDELQSNM- 337
+ +GL YLH R++H D+KA NVLL D + DFG A D L ++
Sbjct: 169 YLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 225
Query: 338 --NRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+ I GT +M+PE + K D++S ++L L+
Sbjct: 226 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 265
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 171 KLGEGGFGPVYK-GKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
+LG G FG V++ + G A K + E + E+ ++ L H LV L
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ E ++IYE+M L F+ V D +K D V + + +GL
Sbjct: 224 EDDNEMVMIYEFMSGGEL------------FEKVADEHNKMSED--EAVEYMRQVCKGLC 269
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNP--KISDFGIARMFGGDELQSNMNRIVGTYGYM 347
++H+ + +H DLK N++ + K+ DFG+ D QS + GT +
Sbjct: 270 HMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--DPKQS-VKVTTGTAEFA 323
Query: 348 SPEYALHGLFSIKSDVFSFGVL---LLETLS 375
+PE A +D++S GVL LL LS
Sbjct: 324 APEVAEGKPVGYYTDMWSVGVLSYILLSGLS 354
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 190 EVAVKRLSNKSGQGVEEF--KNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSL 247
EV +RLS + + V E + IL H +++ L YE + S
Sbjct: 128 EVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS----------YE---SSSF 174
Query: 248 DFFLFDY-KYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKA 306
F +FD + FD +T+ K L I+ + + + +LH + ++HRDLK
Sbjct: 175 MFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKP 228
Query: 307 SNVLLDGDMNPKISDFGIA-RMFGGDELQSNMNRIVGTYGYMSPEY------ALHGLFSI 359
N+LLD +M ++SDFG + + G++L+ + GT GY++PE H +
Sbjct: 229 ENILLDDNMQIRLSDFGFSCHLEPGEKLRE----LCGTPGYLAPEILKCSMDETHPGYGK 284
Query: 360 KSDVFSFGVLLLETLS 375
+ D+++ GV+L L+
Sbjct: 285 EVDLWACGVILFTLLA 300
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 43/234 (18%)
Query: 160 STATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKN-EMILIAKLH 218
ST + +G+G FG V++GK GEEVAVK S++ + F+ E+ L
Sbjct: 5 STIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLR 61
Query: 219 HRNLVRLFGCCIEQG----EKILIYEYMPNKSLDFFLFDY--KYSSGFDMVTDPASKGIL 272
H N++ + + L+ +Y + SL FDY +Y+ + +
Sbjct: 62 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGM--------- 108
Query: 273 DWTTRVRIIEGIAQGLLYLHQ-----YSRLRVIHRDLKASNVLLDGDMNPKISDFGIARM 327
+++ A GL +LH + + HRDLK+ N+L+ + I+D G+A
Sbjct: 109 -----IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 163
Query: 328 F--GGDELQSNMNRIVGTYGYMSPEYALHGLFSIK-------SDVFSFGVLLLE 372
D + N VGT YM+PE L ++K +D+++ G++ E
Sbjct: 164 HDSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 40/219 (18%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKL-HHRNLVRLFGCCI 230
+G G FG V++ KL+ +EVA+K++ + FKN + I ++ H N+V L
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 231 EQGEKI------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE-- 282
G+K L+ EY+P Y+ S + L T + +I+
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETV-------YRASRHY---------AKLKQTMPMLLIKLY 146
Query: 283 --GIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP-KISDFGIARMFGGDELQSNMNR 339
+ + L Y+H + + HRD+K N+LLD K+ DFG A++ E N++
Sbjct: 147 MYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSX 201
Query: 340 IVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK 377
I Y Y +PE ++ D++S G ++ E + +
Sbjct: 202 ICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 165 NFSEENKLGEGGFGPVYKGKL-LNGEEVAVKRLS--NKSGQGVEEFKNEMILIAKLHHRN 221
+F ++ LGEG +G V GE VA+K++ +K + + E+ ++ H N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHEN 70
Query: 222 LVRLFGC----CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTR 277
++ +F E ++ I + + L + M++D + + T R
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQMLSDDHIQYFIYQTLR 123
Query: 278 -VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL--- 333
V+++ G VIHRDLK SN+L++ + + K+ DFG+AR+
Sbjct: 124 AVKVLHGS-------------NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 334 -----QSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLE 372
QS M V T Y +PE L +S DV+S G +L E
Sbjct: 171 EPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 171 KLGEGGFGPVYK-GKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
+LG G FG V++ + G A K + E + E+ ++ L H LV L
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
+ E ++IYE+M L F+ V D +K D V + + +GL
Sbjct: 118 EDDNEMVMIYEFMSGGEL------------FEKVADEHNKMSED--EAVEYMRQVCKGLC 163
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDMNP--KISDFGIARMFGGDELQSNMNRIVGTYGYM 347
++H+ + +H DLK N++ + K+ DFG+ D QS + GT +
Sbjct: 164 HMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--DPKQS-VKVTTGTAEFA 217
Query: 348 SPEYALHGLFSIKSDVFSFGVL---LLETLS 375
+PE A +D++S GVL LL LS
Sbjct: 218 APEVAEGKPVGYYTDMWSVGVLSYILLSGLS 248
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 165 NFSEENKLGEGGFGPVYKGKL-LNGEEVAVKRLS--NKSGQGVEEFKNEMILIAKLHHRN 221
+F ++ LGEG +G V GE VA+K++ +K + + E+ ++ H N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHEN 70
Query: 222 LVRLFGC----CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTR 277
++ +F E ++ I + + L + M++D + + T R
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQMLSDDHIQYFIYQTLR 123
Query: 278 -VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL--- 333
V+++ G VIHRDLK SN+L++ + + K+ DFG+AR+
Sbjct: 124 AVKVLHGS-------------NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 334 -----QSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLE 372
QS M V T Y +PE L +S DV+S G +L E
Sbjct: 171 EPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 36/224 (16%)
Query: 159 ISTATHNFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFK-NEMILIAK 216
+ ATH +LG G FG V++ + G + AVK++ +E F+ E++ A
Sbjct: 73 VHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMACAG 122
Query: 217 LHHRNLVRLFGCCIEQGEKILIY-EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L +V L+G + +G + I+ E + SL + + +G L
Sbjct: 123 LTSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQLVKE---------------QGCLPED 166
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGD-MNPKISDFGIARMFGGDELQ 334
+ + +GL YLH SR R++H D+KA NVLL D + + DFG A D L
Sbjct: 167 RALYYLGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 223
Query: 335 SNM---NRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
++ + I GT +M+PE L K DV+S ++L L+
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 171 KLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCC 229
+LG G FG V++ + G K ++ KNE+ ++ +LHH L+ L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 230 IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLL 289
++ E +LI E++ LFD + + M + ++++ + +GL
Sbjct: 118 EDKYEMVLILEFLSGGE----LFDRIAAEDYKM----SEAEVINYMRQA------CEGLK 163
Query: 290 YLHQYSRLRVIHRDLKASNVLLDGDM--NPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
++H++S ++H D+K N++ + + KI DFG+A DE+ + T +
Sbjct: 164 HMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFA 217
Query: 348 SPEYALHGLFSIKSDVFSFGVL---LLETLS 375
+PE +D+++ GVL LL LS
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVLLSGLS 248
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 36/224 (16%)
Query: 159 ISTATHNFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFK-NEMILIAK 216
+ ATH +LG G FG V++ + G + AVK++ +E F+ E++ A
Sbjct: 92 VHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMACAG 141
Query: 217 LHHRNLVRLFGCCIEQGEKILIY-EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWT 275
L +V L+G + +G + I+ E + SL + + +G L
Sbjct: 142 LTSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQLVKE---------------QGCLPED 185
Query: 276 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGD-MNPKISDFGIARMFGGDELQ 334
+ + +GL YLH SR R++H D+KA NVLL D + + DFG A D L
Sbjct: 186 RALYYLGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 242
Query: 335 SNM---NRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
++ + I GT +M+PE L K DV+S ++L L+
Sbjct: 243 KSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 286
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 104/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F +G G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EYMP G DM + G I YLH L +
Sbjct: 121 EYMP---------------GGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D K++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 32/220 (14%)
Query: 163 THNFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFK-NEMILIAKLHHR 220
H + + ++G G FG V++ K G + AVK++ +E F+ E++ A L
Sbjct: 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSP 110
Query: 221 NLVRLFGCCIEQGEKILIY-EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
+V L+G + +G + I+ E + SL + G L +
Sbjct: 111 RIVPLYGA-VREGPWVNIFMELLEGGSLGQLI---------------KQMGCLPEDRALY 154
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGD-MNPKISDFGIARMFGGDELQSNM- 337
+ +GL YLH R++H D+KA NVLL D + DFG A D L ++
Sbjct: 155 YLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211
Query: 338 --NRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+ I GT +M+PE + K D++S ++L L+
Sbjct: 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 251
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 43/225 (19%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNLVRLFG 227
+ +G+G FG V++GK GEEVAVK S++ + F+ E+ L H N++
Sbjct: 9 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHENILGFIA 65
Query: 228 CCIEQG----EKILIYEYMPNKSLDFFLFDY--KYSSGFDMVTDPASKGILDWTTRVRII 281
+ + L+ +Y + SL FDY +Y+ + + +++
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGM--------------IKLA 107
Query: 282 EGIAQGLLYLH-----QYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF--GGDELQ 334
A GL +LH + + HRDLK+ N+L+ + I+D G+A D +
Sbjct: 108 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 167
Query: 335 SNMNRIVGTYGYMSPEYALHGLFSIK-------SDVFSFGVLLLE 372
N VGT YM+PE L ++K +D+++ G++ E
Sbjct: 168 IAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE 211
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 104/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F +G G FG V
Sbjct: 1 GNAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EYMP G DM + G I YLH L +
Sbjct: 121 EYMP---------------GGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D K++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 32/220 (14%)
Query: 163 THNFSEENKLGEGGFGPVYKGK-LLNGEEVAVKRLSNKSGQGVEEFK-NEMILIAKLHHR 220
H + + ++G G FG V++ K G + AVK++ +E F+ E++ A L
Sbjct: 73 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSP 126
Query: 221 NLVRLFGCCIEQGEKILIY-EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVR 279
+V L+G + +G + I+ E + SL + G L +
Sbjct: 127 RIVPLYGA-VREGPWVNIFMELLEGGSLGQLI---------------KQMGCLPEDRALY 170
Query: 280 IIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGD-MNPKISDFGIARMFGGDELQSNM- 337
+ +GL YLH R++H D+KA NVLL D + DFG A D L ++
Sbjct: 171 YLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 227
Query: 338 --NRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
+ I GT +M+PE + K D++S ++L L+
Sbjct: 228 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 267
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 165 NFSEENKLGEGGFGPVYKGKL-LNGEEVAVKRLS--NKSGQGVEEFKNEMILIAKLHHRN 221
+F ++ LGEG +G V GE VA+K++ +K + + E+ ++ H N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHEN 70
Query: 222 LVRLFGC----CIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTR 277
++ +F E ++ I + + L + M++D + + T R
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQMLSDDHIQYFIYQTLR 123
Query: 278 -VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDEL--- 333
V+++ G VIHRDLK SN+L++ + + K+ DFG+AR+
Sbjct: 124 AVKVLHGS-------------NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 334 -----QSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLE 372
QS M V T Y +PE L +S DV+S G +L E
Sbjct: 171 EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 172 LGEGGFGPVYKGKL-LNGEEVAVKRLSNKSG--QGVEEFKNEMILIAKLHHRNLVRLFGC 228
+G G +G V + L G++VA+K++ N + E+ ++ H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI--- 119
Query: 229 CIEQGEKILIYEYMPNKSLD--FFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
K ++ +P + + D S ++ +S+ + R + + + +
Sbjct: 120 ------KDILRPTVPYGEFKSVYVVLDLMESDLHQIIH--SSQPLTLEHVRYFLYQ-LLR 170
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF--GGDELQSNMNRIVGTY 344
GL Y+H +VIHRDLK SN+L++ + KI DFG+AR E Q M V T
Sbjct: 171 GLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 345 GYMSPE--YALHGLFSIKSDVFSFGVLLLETLSSKK 378
Y +PE +LH ++ D++S G + E L+ ++
Sbjct: 228 WYRAPELMLSLHE-YTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 43/225 (19%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNLVRLFG 227
+ +G+G FG V++GK GEEVAVK S++ + F+ E+ L H N++
Sbjct: 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHENILGFIA 64
Query: 228 CCIEQG----EKILIYEYMPNKSLDFFLFDY--KYSSGFDMVTDPASKGILDWTTRVRII 281
+ + L+ +Y + SL FDY +Y+ + + +++
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGM--------------IKLA 106
Query: 282 EGIAQGLLYLHQ-----YSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF--GGDELQ 334
A GL +LH + + HRDLK+ N+L+ + I+D G+A D +
Sbjct: 107 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 166
Query: 335 SNMNRIVGTYGYMSPEYALHGLFSIK-------SDVFSFGVLLLE 372
N VGT YM+PE L ++K +D+++ G++ E
Sbjct: 167 IAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE 210
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 43/225 (19%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNLVRLFG 227
+ +G+G FG V++GK GEEVAVK S++ + F+ E+ L H N++
Sbjct: 34 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHENILGFIA 90
Query: 228 CCIEQG----EKILIYEYMPNKSLDFFLFDY--KYSSGFDMVTDPASKGILDWTTRVRII 281
+ + L+ +Y + SL FDY +Y+ + + +++
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGM--------------IKLA 132
Query: 282 EGIAQGLLYLH-----QYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF--GGDELQ 334
A GL +LH + + HRDLK+ N+L+ + I+D G+A D +
Sbjct: 133 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 192
Query: 335 SNMNRIVGTYGYMSPEYALHGLFSIK-------SDVFSFGVLLLE 372
N VGT YM+PE L ++K +D+++ G++ E
Sbjct: 193 IAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE 236
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 25/213 (11%)
Query: 172 LGEGGFGPVYK------GKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRL 225
+G+G F V + G+ + V V + ++ G E+ K E + L H ++V L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G +++E+M L F + + +GF + + I
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVK-RADAGF----------VYSEAVASHYMRQIL 142
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP---KISDFGIARMFGGDELQSNMNRIVG 342
+ L Y H + +IHRD+K VLL N K+ FG+A G L + VG
Sbjct: 143 EALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VG 197
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
T +M+PE + DV+ GV+L LS
Sbjct: 198 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 230
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 43/225 (19%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNLVRLFG 227
+ +G+G FG V++GK GEEVAVK S++ + F+ E+ L H N++
Sbjct: 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHENILGFIA 103
Query: 228 CCIEQG----EKILIYEYMPNKSLDFFLFDY--KYSSGFDMVTDPASKGILDWTTRVRII 281
+ + L+ +Y + SL FDY +Y+ + + +++
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGM--------------IKLA 145
Query: 282 EGIAQGLLYLH-----QYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF--GGDELQ 334
A GL +LH + + HRDLK+ N+L+ + I+D G+A D +
Sbjct: 146 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 205
Query: 335 SNMNRIVGTYGYMSPEYALHGLFSIK-------SDVFSFGVLLLE 372
N VGT YM+PE L ++K +D+++ G++ E
Sbjct: 206 IAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE 249
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 43/225 (19%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKN-EMILIAKLHHRNLVRLFG 227
+ +G+G FG V++GK GEEVAVK S++ + F+ E+ L H N++
Sbjct: 11 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHENILGFIA 67
Query: 228 CCIEQG----EKILIYEYMPNKSLDFFLFDY--KYSSGFDMVTDPASKGILDWTTRVRII 281
+ + L+ +Y + SL FDY +Y+ + + +++
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGM--------------IKLA 109
Query: 282 EGIAQGLLYLH-----QYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF--GGDELQ 334
A GL +LH + + HRDLK+ N+L+ + I+D G+A D +
Sbjct: 110 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 169
Query: 335 SNMNRIVGTYGYMSPEYALHGLFSIK-------SDVFSFGVLLLE 372
N VGT YM+PE L ++K +D+++ G++ E
Sbjct: 170 IAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE 213
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 25/213 (11%)
Query: 172 LGEGGFGPVYK------GKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRL 225
+G+G F V + G+ + V V + ++ G E+ K E + L H ++V L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
G +++E+M L F + + +GF AS + I
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVK-RADAGFVYSEAVAS----------HYMRQIL 140
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNP---KISDFGIARMFGGDELQSNMNRIVG 342
+ L Y H + +IHRD+K VLL N K+ FG+A G L + VG
Sbjct: 141 EALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VG 195
Query: 343 TYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
T +M+PE + DV+ GV+L LS
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 27/217 (12%)
Query: 172 LGEGGFGPVYKGKL-LNGEEVAVKRLSNKSG--QGVEEFKNEMILIAKLHHRNLVRL--- 225
+G G +G V + L G++VA+K++ N + E+ ++ H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
+ GE +Y + D S ++ +S+ + R + + +
Sbjct: 122 LRPTVPYGEFKSVY----------VVLDLMESDLHQIIH--SSQPLTLEHVRYFLYQ-LL 168
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMF--GGDELQSNMNRIVGT 343
+GL Y+H +VIHRDLK SN+L++ + KI DFG+AR E Q M V T
Sbjct: 169 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 344 YGYMSPE--YALHGLFSIKSDVFSFGVLLLETLSSKK 378
Y +PE +LH ++ D++S G + E L+ ++
Sbjct: 226 RWYRAPELMLSLHE-YTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I L YLH S V++RDLK N++LD D + KI+DFG+ + G + + M GT
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 315
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLL 391
Y++PE + D + GV++ E + + FYN D L
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 361
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I L YLH S V++RDLK N++LD D + KI+DFG+ + G + + M GT
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 312
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLL 391
Y++PE + D + GV++ E + + FYN D L
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 358
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 26/192 (13%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVR 224
+F ++ LG G G + + + +VAVKR+ + + + +L H N++R
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFAD--REVQLLRESDEHPNVIR 82
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
F C E+ + ++Y+ + L +Y F A G+ T +++
Sbjct: 83 YF--CTEKDRQ---FQYIAIELCAATLQEYVEQKDF------AHLGLEPIT----LLQQT 127
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLD-----GDMNPKISDFGIARMFG-GDELQSNMN 338
GL +LH L ++HRDLK N+L+ G + ISDFG+ + G S +
Sbjct: 128 TSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 339 RIVGTYGYMSPE 350
+ GT G+++PE
Sbjct: 185 GVPGTEGWIAPE 196
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I L YLH S V++RDLK N++LD D + KI+DFG+ + G + + M GT
Sbjct: 119 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 174
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLL 391
Y++PE + D + GV++ E + + FYN D L
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 220
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I L YLH S V++RDLK N++LD D + KI+DFG+ + G + + M GT
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 173
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLL 391
Y++PE + D + GV++ E + + FYN D L
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 219
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSGQGVEEFK---NEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + ++E + NE ++ ++ LV+L + ++
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY P + + + ++P ++ AQ +L L +
Sbjct: 121 EYAPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+++D K++DFG+A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGKLLN-GEEVAVK----RLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + + G E A K R S S +GV EE + E+ ++ ++ H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + +LI E + L FL A K L I+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---------------AQKESLSEEEATSFIKQ 123
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNV-LLDGDM---NPKISDFGIAR-MFGGDELQSNMN 338
I G+ YLH ++ H DLK N+ LLD ++ + K+ DFG+A + G E ++
Sbjct: 124 ILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--- 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I L YLH S V++RDLK N++LD D + KI+DFG+ + G + + M GT
Sbjct: 117 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 172
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLL 391
Y++PE + D + GV++ E + + FYN D L
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 47/255 (18%)
Query: 171 KLGEGGFGPVYKGKLLN-GEEVAVK----RLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + + G E A K R S S +GV EE + E+ ++ ++ H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + +LI E + L FL A K L I+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---------------AQKESLSEEEATSFIKQ 123
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNV-LLDGDM---NPKISDFGIAR-MFGGDELQSNMN 338
I G+ YLH ++ H DLK N+ LLD ++ + K+ DFG+A + G E ++
Sbjct: 124 ILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--- 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS-------SKKNTRFYNIDSLT-- 389
I GT +++PE + +++D++S GV+ LS K NI S++
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 390 ----LLGHAWNLWKD 400
H L KD
Sbjct: 237 FDEEFFSHTSELAKD 251
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 34/230 (14%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKR-LSNKSGQGVEEFKNEMILIAKLHHRNLVRLFG 227
E LG G G V G VAVKR L + + E K +L H N++R +
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRYY- 93
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
C E ++ L Y+ + + L D S V+D K ++ + ++ IA G
Sbjct: 94 -CSETTDRFL---YIALELCNLNLQDLVESKN---VSDENLKLQKEYNP-ISLLRQIASG 145
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDG-------------DMNPKISDFGIARMF--GGDE 332
+ +LH L++IHRDLK N+L+ ++ ISDFG+ + G
Sbjct: 146 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 333 LQSNMNRIVGTYGYMSPEY---ALHGLFSIKSDVFSFGVLLLETLSSKKN 379
+ N+N GT G+ +PE + + D+FS G + LS K+
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 34/230 (14%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKR-LSNKSGQGVEEFKNEMILIAKLHHRNLVRLFG 227
E LG G G V G VAVKR L + + E K +L H N++R +
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRYY- 93
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
C E ++ L Y+ + + L D S V+D K ++ + ++ IA G
Sbjct: 94 -CSETTDRFL---YIALELCNLNLQDLVESKN---VSDENLKLQKEYNP-ISLLRQIASG 145
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDG-------------DMNPKISDFGIARMF--GGDE 332
+ +LH L++IHRDLK N+L+ ++ ISDFG+ + G
Sbjct: 146 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 333 LQSNMNRIVGTYGYMSPEY---ALHGLFSIKSDVFSFGVLLLETLSSKKN 379
+ N+N GT G+ +PE + + D+FS G + LS K+
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F +G G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + ++P ++ AQ +L L +
Sbjct: 121 EYVPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D K++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGKLLN-GEEVAVK----RLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + + G E A K R S S +GV EE + E+ ++ ++ H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + +LI E + L FL A K L I+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---------------AQKESLSEEEATSFIKQ 123
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNV-LLDGDM---NPKISDFGIAR-MFGGDELQSNMN 338
I G+ YLH ++ H DLK N+ LLD ++ + K+ DFG+A + G E ++
Sbjct: 124 ILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--- 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 2 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 61
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 62 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + ++P ++ AQ +L L +
Sbjct: 122 EYVPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 163
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 218
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 219 AVDWWALGVLIYE 231
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + ++P ++ AQ +L L +
Sbjct: 121 EYVPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 47/255 (18%)
Query: 171 KLGEGGFGPVYKGKLLN-GEEVAVK----RLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + + G E A K R S S +GV EE + E+ ++ ++ H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + +LI E + L FL A K L I+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---------------AQKESLSEEEATSFIKQ 123
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNV-LLDGDM---NPKISDFGIAR-MFGGDELQSNMN 338
I G+ YLH ++ H DLK N+ LLD ++ + K+ DFG+A + G E ++
Sbjct: 124 ILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--- 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS-------SKKNTRFYNIDSLT-- 389
I GT +++PE + +++D++S GV+ LS K NI S++
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 390 ----LLGHAWNLWKD 400
H L KD
Sbjct: 237 FDEEFFSHTSELAKD 251
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 171 KLGEGGFGPVYKGKLLN-GEEVAVK----RLSNKSGQGV--EEFKNEMILIAKLHHRNLV 223
+LG G F V K + + G E A K R S S +GV EE + E+ ++ ++ H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
L + + +LI E + L FL A K L I+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---------------AQKESLSEEEATSFIKQ 123
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNV-LLDGDM---NPKISDFGIAR-MFGGDELQSNMN 338
I G+ YLH ++ H DLK N+ LLD ++ + K+ DFG+A + G E ++
Sbjct: 124 ILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--- 177
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
I GT +++PE + +++D++S GV+ LS
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + ++P ++ AQ +L L +
Sbjct: 121 EYVPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 2 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 61
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 62 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + ++P ++ AQ +L L +
Sbjct: 122 EYVPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 163
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGTPEYLAPEIILSKGYNK 218
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 219 AVDWWALGVLIYE 231
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 107/255 (41%), Gaps = 45/255 (17%)
Query: 170 NKLGEGGFGPVYKGKLLN-GEEVAVK----RLSNKSGQGV--EEFKNEMILIAKLHHRNL 222
+LG G F V K + + G E A K R S S +GV EE + E+ ++ ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+ L + + +LI E + L FL A K L I+
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL---------------AQKESLSEEEATSFIK 122
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNV-LLDGDM---NPKISDFGIARMFGGDELQSNMN 338
I G+ YLH ++ H DLK N+ LLD ++ + K+ DFG+A E
Sbjct: 123 QILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFK 176
Query: 339 RIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS-------SKKNTRFYNIDSLT-- 389
I GT +++PE + +++D++S GV+ LS K NI S++
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 390 ----LLGHAWNLWKD 400
H L KD
Sbjct: 237 FDEEFFSHTSELAKD 251
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY P + + + ++P ++ AQ +L L +
Sbjct: 121 EYAPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+++D K++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 1 GNAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + ++P ++ AQ +L L +
Sbjct: 121 EYVPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I + ++ L R+IHRD+K N+LLD + I+DF IA M ++ + + GT
Sbjct: 121 ICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR---ETQITTMAGT 177
Query: 344 YGYMSPEY--ALHGL-FSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLT 389
YM+PE + G +S D +S GV E L + R Y+I S T
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR---RPYHIRSST 223
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 99/234 (42%), Gaps = 38/234 (16%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKR-LSNKSGQGVEEFKNEMILIAKLHHRNLVRLFG 227
E LG G G V G VAVKR L + + E K +L H N++R +
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRYY- 75
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
C E ++ L Y+ + + L D S V+D K ++ + ++ IA G
Sbjct: 76 -CSETTDRFL---YIALELCNLNLQDLVESKN---VSDENLKLQKEYNP-ISLLRQIASG 127
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDG-------------DMNPKISDFGIARMF--GGDE 332
+ +LH L++IHRDLK N+L+ ++ ISDFG+ + G
Sbjct: 128 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 333 LQSNMNRIVGTYGYMSPE-------YALHGLFSIKSDVFSFGVLLLETLSSKKN 379
++N+N GT G+ +PE + D+FS G + LS K+
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 2 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 61
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 62 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + +P ++ AQ +L L +
Sbjct: 122 EYVPGGEM------FSHLRRIGRFXEPHARFY------------AAQIVLTFEYLHSLDL 163
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 218
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 219 AVDWWALGVLIYE 231
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSGQGVEEFK---NEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + ++E + NE ++ ++ LV+L + ++
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY P + + + ++P ++ AQ +L L +
Sbjct: 121 EYAPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+++D +++DFG+A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + +P ++ AQ +L L +
Sbjct: 121 EYVPGGEM------FSHLRRIGRFXEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY P + + + +P ++ AQ +L L +
Sbjct: 121 EYAPGGEM------FSHLRRIGRFXEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+++D K++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 1 GNAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + +P ++ AQ +L L +
Sbjct: 121 EYVPGGEM------FSHLRRIGRFXEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
+ + +L L +L +I+RD+K N+LLD + + ++DFG+++ F DE + + GT
Sbjct: 165 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD-FCGT 223
Query: 344 YGYMSPEYALHGL--FSIKSDVFSFGVLLLETLS 375
YM+P+ G D +S GVL+ E L+
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCIE 231
LG G FG V++ + ++ + + G K E+ ++ HRN++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 232 QGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYL 291
E ++I+E++ LD +F+ +S F+ L+ V + + + L +L
Sbjct: 73 MEELVMIFEFISG--LD--IFERINTSAFE----------LNEREIVSYVHQVCEALQFL 118
Query: 292 HQYSRLRVIHRDLKASNVLLDGDMNP--KISDFGIARMFG-GDELQSNMNRIVGTYGYMS 348
H ++ + H D++ N++ + KI +FG AR GD N + Y +
Sbjct: 119 HSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----NFRLLFTAPEYYA 171
Query: 349 PEYALHGLFSIKSDVFSFGVLLLETLS 375
PE H + S +D++S G L+ LS
Sbjct: 172 PEVHQHDVVSTATDMWSLGTLVYVLLS 198
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY P + + + ++P ++ AQ +L L +
Sbjct: 121 EYAPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+++D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 2 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLV 61
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 62 KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + ++P ++ AQ +L L +
Sbjct: 122 EYVPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 163
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 218
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 219 AVDWWALGVLIYE 231
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 2 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLV 61
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 62 KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + ++P ++ AQ +L L +
Sbjct: 122 EYVPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 163
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 218
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 219 AVDWWALGVLIYE 231
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + ++P ++ AQ +L L +
Sbjct: 121 EYVPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + ++P ++ AQ +L L +
Sbjct: 121 EYVPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 52/240 (21%)
Query: 172 LGEGGFGPVYKG--------KLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
LG+G F ++KG L+ EV +K L E F +++KL H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+G C+ E IL+ E++ SLD +L +K ++ ++ + +
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYL--------------KKNKNCINILWKLEVAKQ 121
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDM-----NP---KISDFGIA-RMFGGDELQ 334
+A + +L + + +IH ++ A N+LL + NP K+SD GI+ + D LQ
Sbjct: 122 LAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
Query: 335 SNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLL----------LETLSSKKNTRFY 383
+ ++ PE + ++ +D +SFG L L L S++ +FY
Sbjct: 179 ERI-------PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY 231
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + ++P ++ AQ +L L +
Sbjct: 121 EYVPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 2 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLV 61
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 62 KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY P + + + ++P ++ AQ +L L +
Sbjct: 122 EYAPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 163
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+++D K++DFG A+ G + GT Y++PE L ++
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 218
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 219 AVDWWALGVLIYE 231
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 36/254 (14%)
Query: 152 IFFSLASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKS------GQGVE 205
++F S+ + + +G+G +G V + ++ NK+ + VE
Sbjct: 14 LYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVE 73
Query: 206 EFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYE-----YMPNKSLDFFLFDYKYSSGF 260
K E+ L+ KLHH N+ RL+ ++ L+ E ++ +K L+ F+ D
Sbjct: 74 RIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDK-LNVFIDDSTGKCAM 132
Query: 261 DMV----------TDPASKG-------ILDWTTRVRIIEGIAQGLL-YLHQYSRLRVIHR 302
D+V + A G LD+ R ++I I + + LH + HR
Sbjct: 133 DVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHR 192
Query: 303 DLKASNVLLDGD--MNPKISDFGIARMFG--GDELQSNMNRIVGTYGYMSPEY--ALHGL 356
D+K N L + K+ DFG+++ F + M GT +++PE +
Sbjct: 193 DIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES 252
Query: 357 FSIKSDVFSFGVLL 370
+ K D +S GVLL
Sbjct: 253 YGPKCDAWSAGVLL 266
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 2 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 61
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ L +L + ++
Sbjct: 62 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVM 121
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY P + + + ++P ++ AQ +L L +
Sbjct: 122 EYAPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 163
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+++D K++DFG A+ G + GT Y++PE L ++
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 218
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 219 AVDWWALGVLIYE 231
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 2 GNAAAAKKGXEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLV 61
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 62 KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + ++P ++ AQ +L L +
Sbjct: 122 EYVPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 163
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 218
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 219 AVDWWALGVLIYE 231
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 22 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLV 81
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 82 KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 141
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+P + + + ++P ++ AQ +L L +
Sbjct: 142 EYVPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 183
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 238
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 239 AVDWWALGVLIYE 251
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 166 FSEENKLGEGGFGPVYKGKLLN-GEEVAVKRLSNKSGQGVEEFKNEMILI----AKLHHR 220
F E G+G FG V GK + G VA+K++ F+N + I A LHH
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-----RFRNRELQIMQDLAVLHHP 79
Query: 221 NLVRLFGCCIEQGEKI-------LIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
N+V+L GE+ ++ EY+P+ +L +Y A IL
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQV-------APPPILI 131
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL-DGDMNPKISDFGIARMFGGDE 332
++I I G L+L + V HRD+K NVL+ + D K+ DFG A+ E
Sbjct: 132 KVFLFQLIRSI--GCLHL---PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE 186
Query: 333 LQSNMNRIVGTYGYMSPEYAL-HGLFSIKSDVFSFGVLLLETL 374
N+ I Y Y +PE + ++ D++S G + E +
Sbjct: 187 --PNVAYICSRY-YRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 169 ENKLGEGGFGPVYKGKLLNGEEVAVKR-LSNKSGQGVEEFKNEMILIAKLHHRNLVRLFG 227
E LG G G V G VAVKR L + + E K +L H N++R +
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRYY- 75
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
C E ++ L Y+ + + L D S V+D K ++ + ++ IA G
Sbjct: 76 -CSETTDRFL---YIALELCNLNLQDLVESKN---VSDENLKLQKEYNP-ISLLRQIASG 127
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDG-------------DMNPKISDFGIARMF--GGDE 332
+ +LH L++IHRDLK N+L+ ++ ISDFG+ + G
Sbjct: 128 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 333 LQSNMNRIVGTYGYMSPE-------YALHGLFSIKSDVFSFGVLLLETLSSKKN 379
+ N+N GT G+ +PE + D+FS G + LS K+
Sbjct: 185 FRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 35/219 (15%)
Query: 170 NKLGEGGFGPV-YKGKLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGC 228
KLGEGGF V L +G A+KR+ Q EE + E + +H N++RL
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 229 CI-EQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKG-ILDWTTRVRIIEGIAQ 286
C+ E+G K + +P FF K + ++ + KG L + ++ GI +
Sbjct: 95 CLRERGAKHEAWLLLP-----FF----KRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFG-----IARMFGGDELQSNMNRIV 341
GL +H HRDLK +N+LL + P + D G + G + + +
Sbjct: 146 GLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
Query: 342 G--TYGYMSPEYALHGLFSIKS--------DVFSFGVLL 370
T Y +PE LFS++S DV+S G +L
Sbjct: 203 QRCTISYRAPE-----LFSVQSHCVIDERTDVWSLGCVL 236
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I L YLH V++RD+K N++LD D + KI+DFG+ + D + M GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 168
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLL 391
Y++PE + D + GV++ E + + FYN D L
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLF 214
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 47/227 (20%)
Query: 172 LGEGGFGPVYKGKLL-NGEEVAVKRLSNKSGQGVEEFKNEMILIAKLH-HRNLVRLFGCC 229
L EGGF VY+ + + +G E A+KRL + + E+ + KL H N+V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 230 --------IEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
Q E +L+ E + ++F + S+G L T ++I
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEF-------------LKKMESRGPLSCDTVLKIF 142
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIA---------------R 326
+ + ++H+ + +IHRDLK N+LL K+ DFG A R
Sbjct: 143 YQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRR 201
Query: 327 MFGGDELQSNMNRIVGTYGYMSPEYA-LHGLFSI--KSDVFSFGVLL 370
+E+ N T Y +PE L+ F I K D+++ G +L
Sbjct: 202 ALVEEEITRNT-----TPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I L YLH V++RD+K N++LD D + KI+DFG+ + D + M GT
Sbjct: 119 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 173
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLTLL 391
Y++PE + D + GV++ E + + FYN D L
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLF 219
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 2 GNAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 61
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ L +L + ++
Sbjct: 62 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVM 121
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY P + + + ++P ++ AQ +L L +
Sbjct: 122 EYAPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 163
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+++D K++DFG A+ G + GT Y++PE L ++
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 218
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 219 AVDWWALGVLIYE 231
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I L YLH V++RD+K N++LD D + KI+DFG+ + D + M GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGT 168
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNID 386
Y++PE + D + GV++ E + + FYN D
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + ++P ++ AQ +L L +
Sbjct: 121 EYVAGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LAGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 97/228 (42%), Gaps = 35/228 (15%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNK----SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
+G G FG V + ++V +L +K F E ++A + +V+LF
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF- 141
Query: 228 CCIEQGEKIL--IYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
C Q +K L + EYMP L + +Y D K +T V
Sbjct: 142 -CAFQDDKYLYMVMEYMPGGDLVNLMSNY----------DVPEKWAKFYTAEV------- 183
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
+L L + +IHRD+K N+LLD + K++DFG M + + + VGT
Sbjct: 184 --VLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVHCDTAVGTPD 240
Query: 346 YMSPEY----ALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLT 389
Y+SPE G + + D +S GV L E L +T FY DSL
Sbjct: 241 YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG--DTPFY-ADSLV 285
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 2 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 61
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ L +L + ++
Sbjct: 62 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVM 121
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY P + + + +P ++ AQ +L L +
Sbjct: 122 EYAPGGEM------FSHLRRIGRFXEPHARFY------------AAQIVLTFEYLHSLDL 163
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+++D K++DFG A+ G + GT Y++PE L ++
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 218
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 219 AVDWWALGVLIYE 231
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I L YLH V++RD+K N++LD D + KI+DFG+ + D + M GT
Sbjct: 117 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGT 171
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNID 386
Y++PE + D + GV++ E + + FYN D
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 212
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I L YLH V++RD+K N++LD D + KI+DFG+ + D + M GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 168
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNID 386
Y++PE + D + GV++ E + + FYN D
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 2 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 61
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 62 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + ++P ++ AQ +L L +
Sbjct: 122 EYVAGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 163
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 218
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 219 AVDWWALGVLIYE 231
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I L YLH V++RD+K N++LD D + KI+DFG+ + D + M GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 168
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNID 386
Y++PE + D + GV++ E + + FYN D
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 290 YLHQYSRLRVIHRDLKASNVLL---DGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
YLH+ +IHRDLK NVLL + D KI+DFG +++ G L M + GT Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCGTPTY 182
Query: 347 MSPEYALH---GLFSIKSDVFSFGVLLLETLS 375
++PE + ++ D +S GV+L LS
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + ++P ++ AQ +L L +
Sbjct: 121 EYVAGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 290 YLHQYSRLRVIHRDLKASNVLL---DGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
YLH+ +IHRDLK NVLL + D KI+DFG +++ G L M + GT Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCGTPTY 182
Query: 347 MSPEYALH---GLFSIKSDVFSFGVLLLETLS 375
++PE + ++ D +S GV+L LS
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 290 YLHQYSRLRVIHRDLKASNVLL---DGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
YLH+ +IHRDLK NVLL + D KI+DFG +++ G L M + GT Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCGTPTY 182
Query: 347 MSPEYALH---GLFSIKSDVFSFGVLLLETLS 375
++PE + ++ D +S GV+L LS
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 290 YLHQYSRLRVIHRDLKASNVLL---DGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
YLH+ +IHRDLK NVLL + D KI+DFG +++ G L M + GT Y
Sbjct: 128 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCGTPTY 181
Query: 347 MSPEYALH---GLFSIKSDVFSFGVLLLETLS 375
++PE + ++ D +S GV+L LS
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 213
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + ++P ++ AQ +L L +
Sbjct: 121 EYVAGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + ++P ++ AQ +L L +
Sbjct: 121 EYVAGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 27/209 (12%)
Query: 172 LGEGGFGPVYKGKLLNGEEV--AVKRLSNKSGQGVEEFKNEM----ILIAKLHHRNLVRL 225
+G+G FG V + EEV AVK L K+ +E K+ M +L+ + H LV L
Sbjct: 46 IGKGSFGKVLLARH-KAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 226 FGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
+ +K+ +F+ DY + G + L+ R E IA
Sbjct: 105 -HFSFQTADKL------------YFVLDY-INGGELFYHLQRERCFLEPRARFYAAE-IA 149
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
L YLH L +++RDLK N+LLD + ++DFG+ + E S + GT
Sbjct: 150 SALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPE 204
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLETL 374
Y++PE + D + G +L E L
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLH----HR 220
LG+GGFG V+ G +L + +VA+K + G + E+ L+ K+ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 221 NLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRI 280
++RL E E ++ P + D LFDY G P +G +R
Sbjct: 99 GVIRLLDW-FETQEGFMLVLERPLPAQD--LFDYITEKG------PLGEG----PSRCFF 145
Query: 281 IEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMN-PKISDFGIARMFGGDELQSNMNR 339
+ +A H +SR V+HRD+K N+L+D K+ DFG + DE ++ +
Sbjct: 146 GQVVAA---IQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPYTDFD- 199
Query: 340 IVGTYGYMSPEY-ALHGLFSIKSDVFSFGVLLLETL 374
GT Y PE+ + H ++ + V+S G+LL + +
Sbjct: 200 --GTRVYSPPEWISRHQYHALPATVWSLGILLYDMV 233
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I L YLH V++RD+K N++LD D + KI+DFG+ + D + M GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGT 168
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNID 386
Y++PE + D + GV++ E + + FYN D
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + ++P ++ AQ +L L +
Sbjct: 121 EYVAGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LXGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 290 YLHQYSRLRVIHRDLKASNVLL---DGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
YLH+ +IHRDLK NVLL + D KI+DFG +++ G L M + GT Y
Sbjct: 135 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCGTPTY 188
Query: 347 MSPEYALH---GLFSIKSDVFSFGVLLLETLS 375
++PE + ++ D +S GV+L LS
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 220
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 104/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 2 GNAAAAKKGXEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLV 61
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K G A+K L + + +E NE + ++ LV+L + ++
Sbjct: 62 KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVL 121
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY P + + + ++P ++ AQ +L L +
Sbjct: 122 EYAPGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 163
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D K++DFG A+ G + GT Y++PE L ++
Sbjct: 164 IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 218
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 219 AVDWWALGVLIYE 231
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 1 GNAAAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + ++P ++ AQ +L L +
Sbjct: 121 EYVAGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 1 GNAAAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + ++P ++ AQ +L L +
Sbjct: 121 EYVAGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 22 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 81
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 82 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 141
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + ++P ++ AQ +L L +
Sbjct: 142 EYVAGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 183
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT-----LCGTPEYLAPEIILSKGYNK 238
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 239 AVDWWALGVLIYE 251
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 104/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ +G +M + G I YLH L +
Sbjct: 121 EYV---------------AGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 290 YLHQYSRLRVIHRDLKASNVLL---DGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
YLH+ +IHRDLK NVLL + D KI+DFG +++ G L M + GT Y
Sbjct: 254 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCGTPTY 307
Query: 347 MSPEYALH---GLFSIKSDVFSFGVLLLETLS 375
++PE + ++ D +S GV+L LS
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 339
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 52/240 (21%)
Query: 172 LGEGGFGPVYKG--------KLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLV 223
LG+G F ++KG L+ EV +K L E F +++KL H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 224 RLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEG 283
+G C E IL+ E++ SLD +L +K ++ ++ + +
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYL--------------KKNKNCINILWKLEVAKQ 121
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDM-----NP---KISDFGIA-RMFGGDELQ 334
+A + +L + + +IH ++ A N+LL + NP K+SD GI+ + D LQ
Sbjct: 122 LAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
Query: 335 SNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLL----------LETLSSKKNTRFY 383
+ ++ PE + ++ +D +SFG L L L S++ +FY
Sbjct: 179 ERI-------PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY 231
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 290 YLHQYSRLRVIHRDLKASNVLL---DGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGY 346
YLH+ +IHRDLK NVLL + D KI+DFG +++ G L M + GT Y
Sbjct: 268 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCGTPTY 321
Query: 347 MSPEYALH---GLFSIKSDVFSFGVLLLETLS 375
++PE + ++ D +S GV+L LS
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 353
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + + +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K + G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + ++P ++ AQ +L L +
Sbjct: 121 EYVAGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 1 GNAAAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + +P ++ AQ +L L +
Sbjct: 121 EYVAGGEM------FSHLRRIGRFAEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 104/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 22 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 81
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 82 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 141
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ +G +M + G I YLH L +
Sbjct: 142 EYV---------------AGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDL 183
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 238
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 239 AVDWWALGVLIYE 251
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 104/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 1 GNAAAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ +G +M + G I YLH L +
Sbjct: 121 EYV---------------AGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ L YLH+ +I+RDLK NVLLD + + K++D+G+ + G + GT
Sbjct: 130 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGT 184
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
Y++PE + D ++ GVL+ E ++ +
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 39/229 (17%)
Query: 159 ISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVK--RLSNKSGQGVEEFKNEMILIAK 216
IS +S ++G GG V++ + A+K L Q ++ ++NE+ + K
Sbjct: 51 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
Query: 217 L--HHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDW 274
L H ++RL+ YE D +++ D+ + K +D
Sbjct: 111 LQQHSDKIIRLYD-----------YEIT-----DQYIYMVMECGNIDLNSWLKKKKSIDP 154
Query: 275 TTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL-DGDMNPKISDFGIARMFGGDEL 333
R + + + + +HQ+ ++H DLK +N L+ DG + K+ DFGIA D
Sbjct: 155 WERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTT 209
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKS------------DVFSFGVLL 370
+ VGT YM PE A+ + S + DV+S G +L
Sbjct: 210 SVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 25/226 (11%)
Query: 157 ASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNK----SGQGVEEFKNEMI 212
AS S +F +G G + V +L + + R+ K + ++ + E
Sbjct: 45 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKH 104
Query: 213 LIAKL-HHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGI 271
+ + +H LV L C + + EY+ L F + + +
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM--------------QRQRKL 150
Query: 272 LDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
+ R E I+ L YLH+ +I+RDLK NVLLD + + K++D+G+ + G
Sbjct: 151 PEEHARFYSAE-ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGL 204
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
+ GT Y++PE + D ++ GVL+ E ++ +
Sbjct: 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + ++P ++ AQ +L L +
Sbjct: 121 EYVAGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ +
Sbjct: 218 AVDWWALGVLIYQ 230
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 39/229 (17%)
Query: 159 ISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVK--RLSNKSGQGVEEFKNEMILIAK 216
IS +S ++G GG V++ + A+K L Q ++ ++NE+ + K
Sbjct: 7 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 66
Query: 217 L--HHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDW 274
L H ++RL+ YE D +++ D+ + K +D
Sbjct: 67 LQQHSDKIIRLYD-----------YEIT-----DQYIYMVMECGNIDLNSWLKKKKSIDP 110
Query: 275 TTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL-DGDMNPKISDFGIARMFGGDEL 333
R + + + + +HQ+ ++H DLK +N L+ DG + K+ DFGIA D
Sbjct: 111 WERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTT 165
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKS------------DVFSFGVLL 370
+ VGT YM PE A+ + S + DV+S G +L
Sbjct: 166 SVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 213
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 28/234 (11%)
Query: 144 GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKGKLL-NGEEVAVKRLSNKSG 201
K+KE + + + +TA F LG G FG V K + G A+K L +
Sbjct: 6 AKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV 65
Query: 202 ---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSS 258
+ +E NE ++ ++ LV+L + ++ EY+P + + +
Sbjct: 66 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM------FSHLR 119
Query: 259 GFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPK 318
++P ++ AQ +L L +I+RDLK N+L+D +
Sbjct: 120 RIGRFSEPHARFY------------AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 167
Query: 319 ISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLE 372
++DFG A+ G + GT Y++PE L ++ D ++ GVL+ E
Sbjct: 168 VTDFGFAKRVKGRTWT-----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 216
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ L YLH+ +I+RDLK NVLLD + + K++D+G+ + G + GT
Sbjct: 115 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGT 169
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
Y++PE + D ++ GVL+ E ++ +
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 43/231 (18%)
Query: 159 ISTATHNFSEENKLGEGGFGPVYKGKLLNGEE--VAVK--RLSNKSGQGVEEFKNEMILI 214
IS +S ++G GG V++ +LN ++ A+K L Q ++ ++NE+ +
Sbjct: 4 ISVKGRIYSILKQIGSGGSSKVFQ--VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 61
Query: 215 AKL--HHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGIL 272
KL H ++RL+ YE D +++ D+ + K +
Sbjct: 62 NKLQQHSDKIIRLYD-----------YEIT-----DQYIYMVMECGNIDLNSWLKKKKSI 105
Query: 273 DWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL-DGDMNPKISDFGIARMFGGD 331
D R + + + + +HQ+ ++H DLK +N L+ DG + K+ DFGIA D
Sbjct: 106 DPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML--KLIDFGIANQMQPD 160
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGLFSIKS------------DVFSFGVLL 370
+ VGT YM PE A+ + S + DV+S G +L
Sbjct: 161 TTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 210
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 39/230 (16%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVK--RLSNKSGQGVEEFKNEMILIA 215
S+S +S ++G GG V++ + A+K L Q ++ ++NE+ +
Sbjct: 22 SMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLN 81
Query: 216 KL--HHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
KL H ++RL+ I D +++ D+ + K +D
Sbjct: 82 KLQQHSDKIIRLYDYEI----------------TDQYIYMVMECGNIDLNSWLKKKKSID 125
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL-DGDMNPKISDFGIARMFGGDE 332
R + + + + +HQ+ ++H DLK +N L+ DG + K+ DFGIA D
Sbjct: 126 PWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML--KLIDFGIANQMQPDT 180
Query: 333 LQSNMNRIVGTYGYMSPEYALHGLFSIKS------------DVFSFGVLL 370
+ VGT YM PE A+ + S + DV+S G +L
Sbjct: 181 TSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 39/229 (17%)
Query: 159 ISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVK--RLSNKSGQGVEEFKNEMILIAK 216
IS +S ++G GG V++ + A+K L Q ++ ++NE+ + K
Sbjct: 3 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 62
Query: 217 L--HHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDW 274
L H ++RL+ YE D +++ D+ + K +D
Sbjct: 63 LQQHSDKIIRLYD-----------YEIT-----DQYIYMVMECGNIDLNSWLKKKKSIDP 106
Query: 275 TTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL-DGDMNPKISDFGIARMFGGDEL 333
R + + + + +HQ+ ++H DLK +N L+ DG + K+ DFGIA D
Sbjct: 107 WERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTT 161
Query: 334 QSNMNRIVGTYGYMSPEYALHGLFSIKS------------DVFSFGVLL 370
+ VGT YM PE A+ + S + DV+S G +L
Sbjct: 162 SVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 209
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 26/198 (13%)
Query: 158 SISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVK--RLSNKSGQGVEEFKNEMILIA 215
S+S +S ++G GG V++ + A+K L Q ++ ++NE+ +
Sbjct: 22 SMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLN 81
Query: 216 KL--HHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
KL H ++RL+ I D +++ D+ + K +D
Sbjct: 82 KLQQHSDKIIRLYDYEI----------------TDQYIYMVMECGNIDLNSWLKKKKSID 125
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL-DGDMNPKISDFGIARMFGGDE 332
R + + + + +HQ+ ++H DLK +N L+ DG + K+ DFGIA D
Sbjct: 126 PWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML--KLIDFGIANQMQPDX 180
Query: 333 LQSNMNRIVGTYGYMSPE 350
+ VGT YM PE
Sbjct: 181 XXVVKDSQVGTVNYMPPE 198
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGT 343
I+ L YLH+ +I+RDLK NVLLD + + K++D+G+ + G + GT
Sbjct: 119 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGT 173
Query: 344 YGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
Y++PE + D ++ GVL+ E ++ +
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 159 ISTATHNFSEENKLGEGGFGPVYKGKLLNGEE--VAVK--RLSNKSGQGVEEFKNEMILI 214
IS +S ++G GG V++ +LN ++ A+K L Q ++ ++NE+ +
Sbjct: 51 ISVKGRIYSILKQIGSGGSSKVFQ--VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 108
Query: 215 AKL--HHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGIL 272
KL H ++RL+ I D +++ D+ + K +
Sbjct: 109 NKLQQHSDKIIRLYDYEI----------------TDQYIYMVMECGNIDLNSWLKKKKSI 152
Query: 273 DWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL-DGDMNPKISDFGIARMFGGD 331
D R + + + + +HQ+ ++H DLK +N L+ DG + K+ DFGIA D
Sbjct: 153 DPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML--KLIDFGIANQMQPD 207
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGLFSIKS------------DVFSFGVLL 370
+ VGT YM PE A+ + S + DV+S G +L
Sbjct: 208 TTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 172 LGEGGFGPVYKGKLLNGEE-VAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLF---- 226
LG GG G V+ + ++ VA+K++ Q V+ E+ +I +L H N+V++F
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 227 ----------GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTT 276
G E ++ EYM D+ +L+
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMET----------------DLANVLEQGPLLEEHA 122
Query: 277 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLLDG-DMNPKISDFGIARMFGGD-ELQ 334
R+ + + + +GL Y+H + V+HRDLK +N+ ++ D+ KI DFG+AR+ +
Sbjct: 123 RLFMYQ-LLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHK 178
Query: 335 SNMNRIVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETLSSK 377
+++ + T Y SP L K+ D+++ G + E L+ K
Sbjct: 179 GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + ++P ++ AQ +L L +
Sbjct: 121 EYVAGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+++D +++DFG A+ G + GT Y++PE + ++
Sbjct: 163 IYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIIISKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFG-IARMFGGDELQSNMNRIVG 342
I + +L + +L +HRD+K NVLLD + + +++DFG +M +QS++ VG
Sbjct: 181 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV--AVG 238
Query: 343 TYGYMSPEY--ALH---GLFSIKSDVFSFGVLLLETLSSKKNTRFY 383
T Y+SPE A+ G + + D +S GV + E L + T FY
Sbjct: 239 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE--TPFY 282
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFG-IARMFGGDELQSNMNRIVG 342
I + +L + +L +HRD+K NVLLD + + +++DFG +M +QS++ VG
Sbjct: 197 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV--AVG 254
Query: 343 TYGYMSPEY--ALH---GLFSIKSDVFSFGVLLLETLSSKKNTRFY 383
T Y+SPE A+ G + + D +S GV + E L + T FY
Sbjct: 255 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE--TPFY 298
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 97/249 (38%), Gaps = 41/249 (16%)
Query: 156 LASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQG-----------V 204
+A + ++ + + G +G V G G VA+KR+ N G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E+ L+ HH N++ L + E + Y+ + M T
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTEL---------------MRT 118
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLY-----LHQYSRLRVIHRDLKASNVLLDGDMNPKI 319
D A + I D R+ I Q +Y LH V+HRDL N+LL + + I
Sbjct: 119 DLA-QVIHD--QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI 175
Query: 320 SDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK- 377
DF +AR D +N V Y +PE + F+ D++S G ++ E + K
Sbjct: 176 CDFNLAR---EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
Query: 378 --KNTRFYN 384
+ + FYN
Sbjct: 233 LFRGSTFYN 241
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 97/249 (38%), Gaps = 41/249 (16%)
Query: 156 LASISTATHNFSEENKLGEGGFGPVYKGKLLNGEEVAVKRLSNKSGQG-----------V 204
+A + ++ + + G +G V G G VA+KR+ N G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 205 EEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVT 264
+ E+ L+ HH N++ L + E + Y+ + M T
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTEL---------------MRT 118
Query: 265 DPASKGILDWTTRVRIIEGIAQGLLY-----LHQYSRLRVIHRDLKASNVLLDGDMNPKI 319
D A + I D R+ I Q +Y LH V+HRDL N+LL + + I
Sbjct: 119 DLA-QVIHD--QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI 175
Query: 320 SDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGL-FSIKSDVFSFGVLLLETLSSK- 377
DF +AR D +N V Y +PE + F+ D++S G ++ E + K
Sbjct: 176 CDFNLAR---EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
Query: 378 --KNTRFYN 384
+ + FYN
Sbjct: 233 LFRGSTFYN 241
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 102/250 (40%), Gaps = 35/250 (14%)
Query: 128 NMTRAKEFCEGDSAAKGKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKGKLL 186
N + KEF K+KE + + + +TA F LG G FG V K
Sbjct: 4 NSSDVKEFL-------AKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK 56
Query: 187 -NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYM 242
G A+K L + + +E NE ++ ++ LV+L + ++ EY+
Sbjct: 57 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 116
Query: 243 PNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHR 302
P + + + ++P ++ AQ +L L +I+R
Sbjct: 117 PGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDLIYR 158
Query: 303 DLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSD 362
DLK N+L+D +++DFG A+ G + GT Y++PE L ++ D
Sbjct: 159 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNKAVD 213
Query: 363 VFSFGVLLLE 372
++ GVL+ E
Sbjct: 214 WWALGVLIYE 223
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + ++P ++ AQ +L L +
Sbjct: 121 EYVAGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT Y++P L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPAIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 301 HRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIK 360
HRD+K N+L+ D + DFGIA DE + + VGT Y +PE + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASAT-TDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 361 SDVFSFGVLLLETLSSKKNTRFYNIDSLTLLGHAWN 396
+D+++ +L E L+ Y D L++ G N
Sbjct: 216 ADIYALTCVLYECLTGSPP---YQGDQLSVXGAHIN 248
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 92/226 (40%), Gaps = 31/226 (13%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNK----SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
+G G FG V + + +V +L +K F E ++A + +V+LF
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ ++ EYMP L + +Y D K +T V
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNY----------DVPEKWARFYTAEV--------- 182
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
+L L + IHRD+K N+LLD + K++DFG M E + VGT Y+
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYI 241
Query: 348 SPEY----ALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLT 389
SPE G + + D +S GV L E L +T FY DSL
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG--DTPFY-ADSLV 284
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 92/226 (40%), Gaps = 31/226 (13%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNK----SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
+G G FG V + + +V +L +K F E ++A + +V+LF
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ ++ EYMP L + +Y D K +T V
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLVNLMSNY----------DVPEKWARFYTAEV--------- 177
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
+L L + IHRD+K N+LLD + K++DFG M E + VGT Y+
Sbjct: 178 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYI 236
Query: 348 SPEY----ALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLT 389
SPE G + + D +S GV L E L +T FY DSL
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG--DTPFY-ADSLV 279
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 92/226 (40%), Gaps = 31/226 (13%)
Query: 172 LGEGGFGPVYKGKLLNGEEVAVKRLSNK----SGQGVEEFKNEMILIAKLHHRNLVRLFG 227
+G G FG V + + +V +L +K F E ++A + +V+LF
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 228 CCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQG 287
+ ++ EYMP L + +Y D K +T V
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNY----------DVPEKWARFYTAEV--------- 182
Query: 288 LLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYM 347
+L L + IHRD+K N+LLD + K++DFG M E + VGT Y+
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYI 241
Query: 348 SPEY----ALHGLFSIKSDVFSFGVLLLETLSSKKNTRFYNIDSLT 389
SPE G + + D +S GV L E L +T FY DSL
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG--DTPFY-ADSLV 284
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFG-IARMFGGDELQSNMNRIVG 342
+A+ ++ + +L +HRD+K N+L+D + + +++DFG ++ +QS++ VG
Sbjct: 181 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSV--AVG 238
Query: 343 TYGYMSPEYAL-----HGLFSIKSDVFSFGVLLLETLSSKKNTRFY 383
T Y+SPE G + + D +S GV + E L + T FY
Sbjct: 239 TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE--TPFY 282
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
AQ +L L +I+RDLK N+L+D +++DFG A+ G + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTP 202
Query: 345 GYMSPEYALHGLFSIKSDVFSFGVLLLE 372
Y++PE L ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 35/250 (14%)
Query: 128 NMTRAKEFCEGDSAAKGKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKGKLL 186
N + KEF K+KE + + + +TA F LG G FG V K
Sbjct: 4 NSSDVKEFL-------AKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK 56
Query: 187 -NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIYEYM 242
G A+K L + + +E NE ++ ++ LV+L + ++ EY+
Sbjct: 57 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 116
Query: 243 PNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRVIHR 302
P + + + +P ++ AQ +L L +I+R
Sbjct: 117 PGGEM------FSHLRRIGRFXEPHARFY------------AAQIVLTFEYLHSLDLIYR 158
Query: 303 DLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSIKSD 362
DLK N+L+D +++DFG A+ G + GT Y++PE L ++ D
Sbjct: 159 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEYLAPEIILSKGYNKAVD 213
Query: 363 VFSFGVLLLE 372
++ GVL+ E
Sbjct: 214 WWALGVLIYE 223
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 30/253 (11%)
Query: 127 GNMTRAKEFCEGDSAAK--GKSKESWFIFFSLASISTAT-HNFSEENKLGEGGFGPVYKG 183
GN AK+ E +S + K+KE + + S +TA F LG G FG V
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 184 KLL-NGEEVAVKRLSNKSG---QGVEEFKNEMILIAKLHHRNLVRLFGCCIEQGEKILIY 239
K +G A+K L + + +E NE ++ ++ LV+L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 240 EYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGLLYLHQYSRLRV 299
EY+ + + + ++P ++ AQ +L L +
Sbjct: 121 EYVAGGEM------FSHLRRIGRFSEPHARFY------------AAQIVLTFEYLHSLDL 162
Query: 300 IHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYGYMSPEYALHGLFSI 359
I+RDLK N+L+D +++DFG A+ G + GT ++PE L ++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTPEALAPEIILSKGYNK 217
Query: 360 KSDVFSFGVLLLE 372
D ++ GVL+ E
Sbjct: 218 AVDWWALGVLIYE 230
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 37/225 (16%)
Query: 168 EENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLF 226
+E+ LGEG V L+ +E AVK + + G I R + L+
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH-----------IRSRVFREVEMLY 65
Query: 227 GCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQ 286
C QG + ++ + D F ++ G +++ + + +++ +A
Sbjct: 66 QC---QGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVAS 122
Query: 287 GLLYLHQYSRLRVIHRDLKASNVLLD--GDMNP-KISDFGIARMFGGDELQSNMNRI--- 340
L +LH + HRDLK N+L + ++P KI DFG+ G +L + + I
Sbjct: 123 ALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLG---SGIKLNGDCSPISTP 176
Query: 341 -----VGTYGYMSPEYA-----LHGLFSIKSDVFSFGVLLLETLS 375
G+ YM+PE ++ + D++S GV+L LS
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
AQ +L L +I+RDLK N+L+D +++DFG A+ G + GT
Sbjct: 143 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-----LCGTP 197
Query: 345 GYMSPEYALHGLFSIKSDVFSFGVLLLE 372
Y++PE L ++ D ++ GVL+ E
Sbjct: 198 EYLAPEIILSKGYNKAVDWWALGVLIYE 225
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTY 344
AQ +L L +I+RDLK N+L+D +++DFG A+ G + GT
Sbjct: 135 AQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWX-----LCGTP 189
Query: 345 GYMSPEYALHGLFSIKSDVFSFGVLLLE 372
Y++PE L ++ D ++ GVL+ E
Sbjct: 190 EYLAPEIILSKGYNKAVDWWALGVLIYE 217
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 43/231 (18%)
Query: 159 ISTATHNFSEENKLGEGGFGPVYKGKLLNGEE--VAVK--RLSNKSGQGVEEFKNEMILI 214
IS +S ++G GG V++ +LN ++ A+K L Q ++ ++NE+ +
Sbjct: 51 ISVKGRIYSILKQIGSGGSSKVFQ--VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 108
Query: 215 AKL--HHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGIL 272
KL H ++RL+ I D +++ D+ + K +
Sbjct: 109 NKLQQHSDKIIRLYDYEI----------------TDQYIYMVMECGNIDLNSWLKKKKSI 152
Query: 273 DWTTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNVLL-DGDMNPKISDFGIARMFGGD 331
D R + + + + +HQ+ ++H DLK +N L+ DG + K+ DFGIA D
Sbjct: 153 DPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML--KLIDFGIANQMQPD 207
Query: 332 ELQSNMNRIVGTYGYMSPEYALHGLFSIKS------------DVFSFGVLL 370
+ VG YM PE A+ + S + DV+S G +L
Sbjct: 208 TTSVVKDSQVGAVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 38/217 (17%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 223 VRLFGCCIEQGEKILIYEYM-PNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRII 281
+RL +LI E M P + L FD +T+ +G L
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDL------------FDFITE---RGALQEELARSFF 120
Query: 282 EGIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMN 338
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 121 WQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD 174
Query: 339 RIVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 175 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 208
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 61/251 (24%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGEE-VAVKRLSNKSGQGVEEFKN---EMILIAKLHHR 220
N+ ++ +G G +G VY N + VA+K++ N+ + + + K E+ ++ +L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKV-NRMFEDLIDCKRILREITILNRLKSD 87
Query: 221 NLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD-WTTRVR 279
++RL I + D FD Y +V + A + + T +
Sbjct: 88 YIIRLHDLIIPE---------------DLLKFDELY-----IVLEIADSDLKKLFKTPIF 127
Query: 280 IIEGIAQGLLY--------LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
+ E + +LY +H+ +IHRDLK +N LL+ D + KI DFG+AR D
Sbjct: 128 LTEQHVKTILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSD 184
Query: 332 E-----------------------LQSNMNRIVGTYGYMSPEYA-LHGLFSIKSDVFSFG 367
+ L+ + V T Y +PE L ++ D++S G
Sbjct: 185 KDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTG 244
Query: 368 VLLLETLSSKK 378
+ E L+ K
Sbjct: 245 CIFAELLNMMK 255
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+G+G FG V K + E VA+K + NK F N+ A++ VRL
Sbjct: 43 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA-----FLNQ----AQIE----VRLLELMN 89
Query: 231 EQGEKILIYEYMPNKSLDF-----FLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
+ ++ Y + F +F+ + +D++ + +G+ TR + + +
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR-KFAQQMC 148
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
LL+L L +IH DLK N+LL NPK S I +L + + + +
Sbjct: 149 TALLFL-ATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF 204
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLE 372
Y SPE L + + D++S G +L+E
Sbjct: 205 YRSPEVLLGMPYDLAIDMWSLGCILVE 231
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
+G+G FG V K + E VA+K + NK F N+ A++ VRL
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA-----FLNQ----AQIE----VRLLELMN 108
Query: 231 EQGEKILIYEYMPNKSLDF-----FLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIA 285
+ ++ Y + F +F+ + +D++ + +G+ TR + + +
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR-KFAQQMC 167
Query: 286 QGLLYLHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGDELQSNMNRIVGTYG 345
LL+L L +IH DLK N+LL NPK S I +L + + + +
Sbjct: 168 TALLFLAT-PELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF 223
Query: 346 YMSPEYALHGLFSIKSDVFSFGVLLLE 372
Y SPE L + + D++S G +L+E
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVE 250
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 136
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 137 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 189
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 190 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 223
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 136
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 137 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 189
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 190 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 223
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 58/245 (23%)
Query: 165 NFSEENKLGEGGFGPVYKGKLLNGEE-VAVKRLSNKSGQGVEEFKN---EMILIAKLHHR 220
N+ ++ +G G +G VY N E+ VA+K++ N+ + + + K E+ ++ +L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV-NRMFEDLIDCKRILREITILNRLKSD 85
Query: 221 NLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD-WTTRVR 279
++RL+ I D FD Y +V + A + + T +
Sbjct: 86 YIIRLYDLIIPD---------------DLLKFDELY-----IVLEIADSDLKKLFKTPIF 125
Query: 280 IIEGIAQGLLY--------LHQYSRLRVIHRDLKASNVLLDGDMNPKISDFGIARMFGGD 331
+ E + +LY +H+ +IHRDLK +N LL+ D + K+ DFG+AR +
Sbjct: 126 LTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182
Query: 332 E--------------------LQSNMNRIVGTYGYMSPEYALHGLFSIKS-DVFSFGVLL 370
+ L+ + V T Y +PE L KS D++S G +
Sbjct: 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIF 242
Query: 371 LETLS 375
E L+
Sbjct: 243 AELLN 247
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 30/216 (13%)
Query: 168 EENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKL--HHRNLVR 224
++ LGEG F K + + AVK +S + +E + I KL H N+V+
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVK 70
Query: 225 LFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGI 284
L +Q L+ E + +G ++ K T I+ +
Sbjct: 71 LHEVFHDQLHTFLVMELL---------------NGGELFERIKKKKHFSETEASYIMRKL 115
Query: 285 AQGLLYLHQYSRLRVIHRDLKASNVLL---DGDMNPKISDFGIARMFGGDELQSNMNRIV 341
+ ++H + V+HRDLK N+L + ++ KI DFG AR+ D +
Sbjct: 116 VSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD--NQPLKTPC 170
Query: 342 GTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLSSK 377
T Y +PE + D++S GV+L LS +
Sbjct: 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 137
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 138 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 190
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 191 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 150
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 151 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 203
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 204 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 122
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 123 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 175
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 176 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 149
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 150 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 202
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 203 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 137
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 138 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 190
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 191 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 150
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 151 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 203
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 204 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 150
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 151 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 203
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 204 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 32/219 (14%)
Query: 163 THNFSEENKLGEGGFGPVYKG-KLLNGEEVAVKRLSNK--------SGQGVEEFKNEMIL 213
+ +S + LG G FG V+ +EV VK + + + + E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 214 IAKLHHRNLVRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILD 273
++++ H N++++ QG L+ E K+ SG D+ LD
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVME--------------KHGSGLDLFAFIDRHPRLD 128
Query: 274 WTTRVRIIEGIAQGLLYLHQYSRLR-VIHRDLKASNVLLDGDMNPKISDFGIARMFGGDE 332
I + + YL RL+ +IHRD+K N+++ D K+ DFG A +
Sbjct: 129 EPLASYIFRQLVSAVGYL----RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK 184
Query: 333 LQSNMNRIVGTYGYMSPEYALHGLF-SIKSDVFSFGVLL 370
L GT Y +PE + + + +++S GV L
Sbjct: 185 L---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTL 220
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 149
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 150 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 202
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 203 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 150
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 151 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 203
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 204 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 149
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 150 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 202
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 203 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 41/223 (18%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKNEMILIAKLHHRNLVRLFGCCI 230
LGEG + V L NG+E AVK + ++G R + L+ C
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRV-----------FREVETLYQC-- 67
Query: 231 EQGEK--ILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIEGIAQGL 288
QG K + + E+ + + + +F+ G ++ + + R++ +A L
Sbjct: 68 -QGNKNILELIEFFEDDTRFYLVFEK--LQGGSILAHIQKQKHFNEREASRVVRDVAAAL 124
Query: 289 LYLHQYSRLRVIHRDLKASNVLLDG--DMNP-KISDFGIARMFGGDELQSNMNRIV---- 341
+LH + HRDLK N+L + ++P KI DF + G +L ++ I
Sbjct: 125 DFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLG---SGMKLNNSCTPITTPEL 178
Query: 342 ----GTYGYMSPEYA-----LHGLFSIKSDVFSFGVLLLETLS 375
G+ YM+PE + + D++S GV+L LS
Sbjct: 179 TTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLS 221
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 137
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 138 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 190
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 191 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 122
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 123 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 175
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 176 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 164
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 165 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 217
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 218 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 76 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 121
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 122 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 174
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 175 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 208
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 149
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 150 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 202
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 203 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 122
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 123 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 175
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 176 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 284 IAQGLLYLHQYSRLRVIHRDLKASNVL-LDGDMNP---KISDFGIARMFGGDELQSNMNR 339
I + + YLH V+HRDLK SN+L +D NP +I DFG A+ + +
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE--NGLLXT 179
Query: 340 IVGTYGYMSPEYALHGLFSIKSDVFSFGVLLLETLS 375
T +++PE + D++S GVLL L+
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLT 215
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 172 LGEGGFGPVYKG-KLLNGEEVAVKRLSNKSGQGVEEFKN------EMILIAKLHH--RNL 222
LG GGFG VY G ++ + VA+K + E N E++L+ K+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 223 VRLFGCCIEQGEKILIYEYMPNKSLDFFLFDYKYSSGFDMVTDPASKGILDWTTRVRIIE 282
+RL +LI E P D F D +T+ +G L
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLF----------DFITE---RGALQEELARSFFW 164
Query: 283 GIAQGLLYLHQYSRLRVIHRDLKASNVLLD---GDMNPKISDFGIARMFGGDELQSNMNR 339
+ + + + H V+HRD+K N+L+D G++ K+ DFG + D + ++ +
Sbjct: 165 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALL-KDTVYTDFD- 217
Query: 340 IVGTYGYMSPEYALHGLFSIKS-DVFSFGVLLLETL 374
GT Y PE+ + + +S V+S G+LL + +
Sbjct: 218 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,990,508
Number of Sequences: 62578
Number of extensions: 564350
Number of successful extensions: 3824
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 231
Number of HSP's that attempted gapping in prelim test: 1287
Number of HSP's gapped (non-prelim): 1143
length of query: 496
length of database: 14,973,337
effective HSP length: 103
effective length of query: 393
effective length of database: 8,527,803
effective search space: 3351426579
effective search space used: 3351426579
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)