Query 040912
Match_columns 102
No_of_seqs 112 out of 642
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 21:13:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040912.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/040912hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1unda_ a.14.1.1 (A:) Advillin 57.3 1.6 0.00012 23.0 0.8 18 57-74 1-18 (36)
2 d1y6ia2 a.261.1.1 (A:83-233) M 50.4 0.56 4.1E-05 31.9 -2.4 31 32-65 118-148 (151)
3 d1b0aa2 c.58.1.2 (A:2-122) Tet 50.0 25 0.0018 21.7 6.1 54 35-101 32-87 (121)
4 d1z3xa2 a.261.1.1 (A:88-235) G 48.5 0.25 1.8E-05 33.6 -4.4 30 32-64 118-147 (148)
5 d1nn7a_ d.42.1.2 (A:) Potassiu 40.5 2.4 0.00017 26.2 -0.3 57 39-100 2-59 (105)
6 d1vi7a2 d.58.11.2 (A:138-208) 36.2 17 0.0012 20.0 3.1 49 48-99 2-58 (71)
7 d1yu5x1 a.14.1.1 (X:10-76) Vil 36.0 5.2 0.00038 23.5 0.8 19 56-74 31-49 (67)
8 d2bkfa1 d.15.2.2 (A:1-85) Next 35.6 41 0.003 20.1 5.7 52 39-93 7-66 (85)
9 d1tjya_ c.93.1.1 (A:) AI-2 rec 31.5 23 0.0017 22.8 3.6 30 48-77 3-35 (316)
10 d1qusa_ d.2.1.6 (A:) 36 kDa so 29.8 15 0.0011 27.0 2.6 23 55-77 13-35 (322)
11 d1ujsa_ a.14.1.1 (A:) Actin-bi 29.3 7.7 0.00056 24.0 0.7 20 56-75 46-65 (88)
12 d1qzpa_ a.14.1.1 (A:) Dematin 29.2 5.6 0.00041 23.5 0.1 19 56-74 32-50 (68)
13 d1y74b1 a.194.1.1 (B:83-132) P 27.9 11 0.00079 21.0 1.2 20 56-75 26-49 (50)
14 d2r85a1 c.30.1.8 (A:1-99) 5-fo 26.9 0.4 2.9E-05 30.8 -5.9 26 30-55 63-88 (99)
15 d2c35b2 d.230.1.1 (B:1-77) N-t 26.2 41 0.003 18.8 3.8 37 49-85 9-46 (77)
16 d1yu8x1 a.14.1.1 (X:42-76) Vil 25.5 10 0.00073 19.5 0.7 17 58-74 1-17 (35)
17 d3buxb3 d.93.1.1 (B:264-351) C 24.8 27 0.002 21.2 2.8 36 36-74 37-73 (88)
18 d1ip9a_ d.15.2.2 (A:) Bud emer 24.3 62 0.0045 18.6 5.1 49 38-91 14-70 (85)
19 d1mlaa1 c.19.1.1 (A:3-127,A:19 23.7 13 0.00093 25.1 1.2 20 58-77 22-41 (235)
20 d2pbza1 c.30.1.8 (A:4-99) 5-fo 21.8 0.59 4.3E-05 29.8 -5.9 26 30-55 58-83 (96)
21 d1a4ia2 c.58.1.2 (A:2-126) Tet 21.5 85 0.0062 19.1 5.4 54 35-101 34-89 (125)
22 d1dkgd1 c.55.1.1 (D:3-185) Hea 20.7 24 0.0017 22.4 2.0 41 54-94 109-149 (183)
23 d1t2da2 d.162.1.1 (A:151-315) 20.6 69 0.005 19.8 4.4 32 39-73 126-157 (165)
24 d1pzqa_ a.34.3.1 (A:) Erythron 20.5 19 0.0014 20.4 1.3 14 10-23 36-49 (60)
25 d1owxa_ d.58.7.1 (A:) Lupus LA 20.2 29 0.0021 20.6 2.2 15 31-45 4-18 (113)
26 d1nnfa_ c.94.1.1 (A:) Ferric-b 20.2 48 0.0035 21.4 3.6 26 39-77 2-27 (308)
27 d3kvta_ d.42.1.2 (A:) akv3.1 v 20.1 8.3 0.0006 23.4 -0.5 57 38-100 3-62 (103)
No 1
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.30 E-value=1.6 Score=23.03 Aligned_cols=18 Identities=22% Similarity=0.565 Sum_probs=16.7
Q ss_pred ccCcHHHHHHHHHHHhhc
Q 040912 57 YLNHPLFQDLLNMAEEEF 74 (102)
Q Consensus 57 ~L~hP~F~~LL~~aeEEf 74 (102)
||+.-.|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 789999999999999998
No 2
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=50.41 E-value=0.56 Score=31.88 Aligned_cols=31 Identities=23% Similarity=0.473 Sum_probs=19.2
Q ss_pred CCCCCceEEEEeeCCceeEEEEeecccCcHHHHH
Q 040912 32 NNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQD 65 (102)
Q Consensus 32 ~~vpkG~~aVyVG~~e~kRfvVp~~~L~hP~F~~ 65 (102)
...|+||+|+.-.-. .-| +--+.|+||.|.+
T Consensus 118 l~AP~GHLP~~~~lr-G~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 118 LSAPQGHLPLLNQLR-GVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp TTSCTTCCSCCCCTT-CTH--HHHHHHTSTHHHH
T ss_pred CCCCCCCCCccchhh-hHH--HHHHHHcCcchhh
Confidence 368999999864211 011 2334788998864
No 3
>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=49.97 E-value=25 Score=21.71 Aligned_cols=54 Identities=28% Similarity=0.388 Sum_probs=39.6
Q ss_pred CCceEEEEeeCCceeEEEEeecccCcHHHHHHHHHHHhhcCCCCCCCceeee--CcHHHHHHHHHhhhc
Q 040912 35 PKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIP--CSEEYFVSLTSTLNC 101 (102)
Q Consensus 35 pkG~~aVyVG~~e~kRfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l~~ 101 (102)
+.+...|+||++. ..-.....-.++.++.|+.. -.+.+| |+.++|...+..||.
T Consensus 32 ~P~LavI~vg~d~-----------aS~~Yv~~k~k~a~~lGi~~--~~~~l~~~~t~~~l~~~I~~lN~ 87 (121)
T d1b0aa2 32 APGLAVVLVGSNP-----------ASQIYVASKRKACEEVGFVS--RSYDLPETTSEAELLELIDTLNA 87 (121)
T ss_dssp CCEEEEEEESCCH-----------HHHHHHHHHHHHHHHHTCEE--CCEEECTTCCHHHHHHHHHHHHT
T ss_pred CceEEEEEeCCCh-----------hHHHHHHHHHHHHHhhccce--eeeeccccccHHHHHHHHHHHhC
Confidence 4588899999830 01136677788899999974 357776 788899999988864
No 4
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=48.49 E-value=0.25 Score=33.58 Aligned_cols=30 Identities=23% Similarity=0.505 Sum_probs=18.6
Q ss_pred CCCCCceEEEEeeCCceeEEEEeecccCcHHHH
Q 040912 32 NNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQ 64 (102)
Q Consensus 32 ~~vpkG~~aVyVG~~e~kRfvVp~~~L~hP~F~ 64 (102)
...|+||+|+.- . .+-..|=-..|+||.|.
T Consensus 118 l~AP~GHLP~~~-~--lrg~~~~~~~l~h~a~~ 147 (148)
T d1z3xa2 118 LSAPRGHLPLTN-Q--LRGVQVLNALLNHPAWT 147 (148)
T ss_dssp TTSCTTCCSCCC-C--TTCSHHHHHHHTCGGGG
T ss_pred CCCCCCCCCcCC-c--cchHHHHHHHhcCcccc
Confidence 468999999753 2 22333344667787663
No 5
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=40.51 E-value=2.4 Score=26.24 Aligned_cols=57 Identities=19% Similarity=0.204 Sum_probs=38.8
Q ss_pred EEEEeeCCceeEEEEeeccc-CcHHHHHHHHHHHhhcCCCCCCCceeeeCcHHHHHHHHHhhh
Q 040912 39 IAIYVGEGYRKRFVIPISYL-NHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLN 100 (102)
Q Consensus 39 ~aVyVG~~e~kRfvVp~~~L-~hP~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~vl~~l~ 100 (102)
+.+-||. ++|.+..+-| ++|.. +|........++.++|.+-|--|...|+.||..+.
T Consensus 2 I~LNVGG---~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~ylR 59 (105)
T d1nn7a_ 2 IVLNVSG---TRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYR 59 (105)
T ss_dssp EEEEETT---EEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHHHh
Confidence 4567884 6999988877 45531 12223333334446789999999999999998764
No 6
>d1vi7a2 d.58.11.2 (A:138-208) Hypothetical protein YigZ, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=36.18 E-value=17 Score=19.99 Aligned_cols=49 Identities=10% Similarity=0.160 Sum_probs=35.0
Q ss_pred eeEEEEeecccCcHHHHHHHHHH-----HhhcCCCCCCCceeeeC---cHHHHHHHHHhh
Q 040912 48 RKRFVIPISYLNHPLFQDLLNMA-----EEEFGFDHPMGGLTIPC---SEEYFVSLTSTL 99 (102)
Q Consensus 48 ~kRfvVp~~~L~hP~F~~LL~~a-----eEEfG~~~~~G~L~IPC---~~~~F~~vl~~l 99 (102)
+.+|-+..+|=....++.+|++. +++|+- +-.+++.+ .++.|..-+..+
T Consensus 2 ~t~~~l~~dY~~~~~v~~~L~~~~~~i~~~~y~~---~V~l~v~vp~~~~~~f~~~l~d~ 58 (71)
T d1vi7a2 2 LTEYTLQCEYHQLTGIEALLGQCDGKIINSDYQA---FVLLRVALPAAKVAEFSAKLADF 58 (71)
T ss_dssp CEEEEEEECTTTHHHHHHHHHHTTCEEEEEEESS---SEEEEEEECSSTHHHHHHHHHHH
T ss_pred ceEEEEEeccccHHHHHHHHHHCCCEEEeeeecc---EEEEEEEECHHHHHHHHHHHHHh
Confidence 56899999999999999999987 356763 34555555 456666555443
No 7
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=36.01 E-value=5.2 Score=23.52 Aligned_cols=19 Identities=21% Similarity=0.429 Sum_probs=18.0
Q ss_pred cccCcHHHHHHHHHHHhhc
Q 040912 56 SYLNHPLFQDLLNMAEEEF 74 (102)
Q Consensus 56 ~~L~hP~F~~LL~~aeEEf 74 (102)
.||+.-.|++++.++.+||
T Consensus 31 ~yLsd~dF~~vFgms~~eF 49 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 6999999999999999998
No 8
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.63 E-value=41 Score=20.11 Aligned_cols=52 Identities=13% Similarity=0.259 Sum_probs=35.9
Q ss_pred EEEEeeCCceeEEEEeecccCcHHHHHHHHHHHhhcCCC--------CCCCceeeeCcHHHHH
Q 040912 39 IAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFD--------HPMGGLTIPCSEEYFV 93 (102)
Q Consensus 39 ~aVyVG~~e~kRfvVp~~~L~hP~F~~LL~~aeEEfG~~--------~~~G~L~IPC~~~~F~ 93 (102)
+-|..|+ +..||.++.. +++.|.+|..+-+.-||.+ .++--++|.|+.+.=|
T Consensus 7 vKvtf~~-dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E 66 (85)
T d2bkfa1 7 LNVTFKN-EIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEE 66 (85)
T ss_dssp EEEEETT-EEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHH
T ss_pred EEEEECC-ceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHH
Confidence 3444565 6999998543 3678999999999988852 1233588999866433
No 9
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=31.49 E-value=23 Score=22.83 Aligned_cols=30 Identities=20% Similarity=0.213 Sum_probs=23.8
Q ss_pred eeEEEEeecccCcHHHHHHHHH---HHhhcCCC
Q 040912 48 RKRFVIPISYLNHPLFQDLLNM---AEEEFGFD 77 (102)
Q Consensus 48 ~kRfvVp~~~L~hP~F~~LL~~---aeEEfG~~ 77 (102)
.+|..+=+..+++|.|..+.+- +.+++||+
T Consensus 3 ~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 3 AERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 5788888899999999988655 45678875
No 10
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=29.85 E-value=15 Score=27.00 Aligned_cols=23 Identities=26% Similarity=0.495 Sum_probs=21.2
Q ss_pred ecccCcHHHHHHHHHHHhhcCCC
Q 040912 55 ISYLNHPLFQDLLNMAEEEFGFD 77 (102)
Q Consensus 55 ~~~L~hP~F~~LL~~aeEEfG~~ 77 (102)
-+|.+||.+++++++..+++||+
T Consensus 13 ~dya~~p~v~~Fi~~la~~~G~s 35 (322)
T d1qusa_ 13 GDFANNPNAQQFIDKMVNKHGFD 35 (322)
T ss_dssp STTTTCHHHHHHHHHHHHHHCCC
T ss_pred CCcccCHHHHHHHHHHHHHhCCC
Confidence 36899999999999999999997
No 11
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.27 E-value=7.7 Score=23.96 Aligned_cols=20 Identities=25% Similarity=0.399 Sum_probs=18.5
Q ss_pred cccCcHHHHHHHHHHHhhcC
Q 040912 56 SYLNHPLFQDLLNMAEEEFG 75 (102)
Q Consensus 56 ~~L~hP~F~~LL~~aeEEfG 75 (102)
.||+.-.|++++.++.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T d1ujsa_ 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999984
No 12
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.24 E-value=5.6 Score=23.47 Aligned_cols=19 Identities=32% Similarity=0.469 Sum_probs=17.9
Q ss_pred cccCcHHHHHHHHHHHhhc
Q 040912 56 SYLNHPLFQDLLNMAEEEF 74 (102)
Q Consensus 56 ~~L~hP~F~~LL~~aeEEf 74 (102)
.||+.-.|++++.++.+||
T Consensus 32 ~yLsd~dF~~vFgms~~eF 50 (68)
T d1qzpa_ 32 RHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 7999999999999999998
No 13
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.87 E-value=11 Score=20.97 Aligned_cols=20 Identities=35% Similarity=0.572 Sum_probs=14.6
Q ss_pred cccCcHHHHHHHHH----HHhhcC
Q 040912 56 SYLNHPLFQDLLNM----AEEEFG 75 (102)
Q Consensus 56 ~~L~hP~F~~LL~~----aeEEfG 75 (102)
..|+.|.|++||.- |.+-||
T Consensus 26 ~lL~~PH~~aLL~aHD~VA~k~Y~ 49 (50)
T d1y74b1 26 RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCHHHHHHHHHHHHHHHHhcc
Confidence 36788999999974 455555
No 14
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=26.94 E-value=0.4 Score=30.80 Aligned_cols=26 Identities=23% Similarity=0.384 Sum_probs=17.7
Q ss_pred CCCCCCCceEEEEeeCCceeEEEEee
Q 040912 30 NTNNVPKGHIAIYVGEGYRKRFVIPI 55 (102)
Q Consensus 30 ~~~~vpkG~~aVyVG~~e~kRfvVp~ 55 (102)
...-||.|.|++|+|-+.-+.|-||+
T Consensus 63 N~I~IPhgSfv~Y~G~d~ie~~~VP~ 88 (99)
T d2r85a1 63 NAVVVPTGSFVAHLGIELVENMKVPY 88 (99)
T ss_dssp TEEECCCTTHHHHHCHHHHHTCCSCB
T ss_pred CEEEecCCCEEEEEcHHHHhcCCCCc
Confidence 44568999999999963223365554
No 15
>d2c35b2 d.230.1.1 (B:1-77) N-terminal, heterodimerisation domain of RBP7 (RpoE) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.24 E-value=41 Score=18.81 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=27.6
Q ss_pred eEEEEeecccCcHHHHHHHHHHHhhc-CCCCCCCceee
Q 040912 49 KRFVIPISYLNHPLFQDLLNMAEEEF-GFDHPMGGLTI 85 (102)
Q Consensus 49 kRfvVp~~~L~hP~F~~LL~~aeEEf-G~~~~~G~L~I 85 (102)
....||.++|+.++-+.|.++..+.| |-.-.++++.|
T Consensus 9 d~v~i~P~~~~~~~~~~i~~~L~~~~egk~~~~~G~~i 46 (77)
T d2c35b2 9 HEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVI 46 (77)
T ss_dssp EEEEECGGGCCSCHHHHHHHHHHHHHTTCEETTTEEEE
T ss_pred EEEEECHHHhCccHHHHHHHHHHHHhCCEEeCCCCEEE
Confidence 46789999999999999999998887 33223455544
No 16
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=25.49 E-value=10 Score=19.54 Aligned_cols=17 Identities=24% Similarity=0.505 Sum_probs=14.1
Q ss_pred cCcHHHHHHHHHHHhhc
Q 040912 58 LNHPLFQDLLNMAEEEF 74 (102)
Q Consensus 58 L~hP~F~~LL~~aeEEf 74 (102)
|+.-.|++++.++.+||
T Consensus 1 Lsd~dF~~vfgmsr~eF 17 (35)
T d1yu8x1 1 LSDEDFKAVFGMTRSAF 17 (35)
T ss_dssp SCHHHHHHHHSSCHHHH
T ss_pred CCHHHHHHHHCCCHHHH
Confidence 56678999999998887
No 17
>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.75 E-value=27 Score=21.23 Aligned_cols=36 Identities=36% Similarity=0.496 Sum_probs=26.2
Q ss_pred CceEEE-EeeCCceeEEEEeecccCcHHHHHHHHHHHhhc
Q 040912 36 KGHIAI-YVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEF 74 (102)
Q Consensus 36 kG~~aV-yVG~~e~kRfvVp~~~L~hP~F~~LL~~aeEEf 74 (102)
-|.-|+ ||..+ .=++-+-=.|-|++|+|++-+.|-|
T Consensus 37 lGQWAIGyvt~d---g~IlQTIp~nk~L~qaLidG~reGf 73 (88)
T d3buxb3 37 LGQWAIGYVTAD---GNILQTIPHNKPLFQALIDGFREGF 73 (88)
T ss_dssp TTSEEEEEECTT---SCEEEECCSSCCHHHHHHHHHHHTS
T ss_pred ccceeeeeeccC---CceeeeccCccHHHHHHHhccccee
Confidence 344443 77653 3356677789999999999999977
No 18
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.34 E-value=62 Score=18.57 Aligned_cols=49 Identities=10% Similarity=0.125 Sum_probs=33.2
Q ss_pred eEEEEeeCCceeEEEEeecccCcHHHHHHHHHHHhhcCC-------C-CCCCceeeeCcHHH
Q 040912 38 HIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGF-------D-HPMGGLTIPCSEEY 91 (102)
Q Consensus 38 ~~aVyVG~~e~kRfvVp~~~L~hP~F~~LL~~aeEEfG~-------~-~~~G~L~IPC~~~~ 91 (102)
-+=|+.++ +..||.||.+ ..|.+|.++-++-|+- . .+...++|.|+.+.
T Consensus 14 kVKv~~~~-D~~~~~l~~~----it~~dL~~kI~~rf~~~~~~lkY~Dedgd~v~i~sD~Dl 70 (85)
T d1ip9a_ 14 KIKFYYKD-DIFALMLKGD----TTYKELRSKIAPRIDTDNFKLQTKLFDGSGEEIKTDSQV 70 (85)
T ss_dssp EEEECBTT-CCEEEEECSC----CCHHHHHHHHHHHHTSSCEEEEECCSSSCCSCCCSHHHH
T ss_pred EEEEEECC-cEEEEEeCCC----CCHHHHHHHHHHHhCCCceEEEEEcCCCCEEEEeCHHHH
Confidence 34455566 6999999865 3488888888888862 1 12334778888654
No 19
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]}
Probab=23.73 E-value=13 Score=25.13 Aligned_cols=20 Identities=20% Similarity=0.531 Sum_probs=17.6
Q ss_pred cCcHHHHHHHHHHHhhcCCC
Q 040912 58 LNHPLFQDLLNMAEEEFGFD 77 (102)
Q Consensus 58 L~hP~F~~LL~~aeEEfG~~ 77 (102)
-++|.|++.++++.+.+|++
T Consensus 22 ~~~p~~r~~~~~~~~~l~~~ 41 (235)
T d1mlaa1 22 ASYPIVEETFAEASAALGYD 41 (235)
T ss_dssp HHCHHHHHHHHHHHHHHTSC
T ss_pred HCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999999875
No 20
>d2pbza1 c.30.1.8 (A:4-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=21.76 E-value=0.59 Score=29.83 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=17.4
Q ss_pred CCCCCCCceEEEEeeCCceeEEEEee
Q 040912 30 NTNNVPKGHIAIYVGEGYRKRFVIPI 55 (102)
Q Consensus 30 ~~~~vpkG~~aVyVG~~e~kRfvVp~ 55 (102)
...-||.|.|++|+|-+.-+.+.||+
T Consensus 58 naI~IPhgSfv~Y~G~~~ie~~~VP~ 83 (96)
T d2pbza1 58 DGIVVPHGSFVAYLGIEAIEKAKARF 83 (96)
T ss_dssp SSBCCCBTTHHHHSCHHHHHTCCSCC
T ss_pred CeEEEcCCCEEEEecHHHHhhCCCCc
Confidence 45678999999999963223344443
No 21
>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.45 E-value=85 Score=19.10 Aligned_cols=54 Identities=20% Similarity=0.281 Sum_probs=38.1
Q ss_pred CCceEEEEeeCCceeEEEEeecccCcHHHHHHHHHHHhhcCCCCCCCceeee--CcHHHHHHHHHhhhc
Q 040912 35 PKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIP--CSEEYFVSLTSTLNC 101 (102)
Q Consensus 35 pkG~~aVyVG~~e~kRfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l~~ 101 (102)
+-+...|+||++ . . .-.....-.++.++.|... -.+.+| ++.+++...+..+|.
T Consensus 34 ~P~LavIlvg~d-~------a----S~~Yv~~k~k~a~~~Gi~~--~~~~l~~~~~e~el~~~I~~lN~ 89 (125)
T d1a4ia2 34 TPRLAILQVGNR-D------D----SNLYINVKLKAAEEIGIKA--THIKLPRTTTESEVMKYITSLNE 89 (125)
T ss_dssp CCEEEEEEESCC-H------H----HHHHHHHHHHHHHHHTCEE--EEEEECTTCCHHHHHHHHHHHHH
T ss_pred CceEEEEEcCCC-h------h----HHHHHHHHHHHHHhccceE--EEEecCcchhHHHHHHHHHHHhc
Confidence 346788999984 1 0 1235567788899999873 367888 567788888888764
No 22
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Probab=20.72 E-value=24 Score=22.40 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=29.9
Q ss_pred eecccCcHHHHHHHHHHHhhcCCCCCCCceeeeCcHHHHHH
Q 040912 54 PISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVS 94 (102)
Q Consensus 54 p~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~ 94 (102)
...-|---.++.|.+.|++.+|-.-.+-+|++|+.....+.
T Consensus 109 s~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~~r 149 (183)
T d1dkgd1 109 APPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQR 149 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHH
Confidence 44456666788899999998887644567999997765543
No 23
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=20.59 E-value=69 Score=19.83 Aligned_cols=32 Identities=22% Similarity=0.208 Sum_probs=21.6
Q ss_pred EEEEeeCCceeEEEEeecccCcHHHHHHHHHHHhh
Q 040912 39 IAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEE 73 (102)
Q Consensus 39 ~aVyVG~~e~kRfvVp~~~L~hP~F~~LL~~aeEE 73 (102)
+||-+|. +.-.-++++. |+ +.=+++|++|++|
T Consensus 126 ~Pv~lg~-~Gv~~i~~l~-L~-~~E~~~L~~s~~~ 157 (165)
T d1t2da2 126 TPVVLGA-NGVEQVIELQ-LN-SEEKAKFDEAIAE 157 (165)
T ss_dssp EEEEEET-TEEEEECCCC-CC-HHHHHHHHHHHHH
T ss_pred eeEEEcC-CceEEEeCCC-CC-HHHHHHHHHHHHH
Confidence 4566676 3555567776 65 6667888888776
No 24
>d1pzqa_ a.34.3.1 (A:) Erythronolide synthase {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=20.49 E-value=19 Score=20.42 Aligned_cols=14 Identities=21% Similarity=0.143 Sum_probs=11.6
Q ss_pred HHHHHHhhhhhHhh
Q 040912 10 HAKQKLQRTLSAKI 23 (102)
Q Consensus 10 ~~k~~l~r~~s~~~ 23 (102)
+|..+||||.|...
T Consensus 36 rle~llrrw~srr~ 49 (60)
T d1pzqa_ 36 RLESLLRRWNSRRA 49 (60)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCC
Confidence 67889999998764
No 25
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.24 E-value=29 Score=20.58 Aligned_cols=15 Identities=13% Similarity=0.290 Sum_probs=12.8
Q ss_pred CCCCCCceEEEEeeC
Q 040912 31 TNNVPKGHIAIYVGE 45 (102)
Q Consensus 31 ~~~vpkG~~aVyVG~ 45 (102)
..+.|.|++-+|||.
T Consensus 4 ~~~~~~g~~~~fvgn 18 (113)
T d1owxa_ 4 SLEEKIGCLLKFSGD 18 (113)
T ss_dssp CCSCCCCCEEEEEES
T ss_pred CcCCCCCCeEEEECC
Confidence 357899999999995
No 26
>d1nnfa_ c.94.1.1 (A:) Ferric-binding protein FbpA {Haemophilus influenzae [TaxId: 727]}
Probab=20.16 E-value=48 Score=21.42 Aligned_cols=26 Identities=23% Similarity=0.387 Sum_probs=20.2
Q ss_pred EEEEeeCCceeEEEEeecccCcHHHHHHHHHHHhhcCCC
Q 040912 39 IAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFD 77 (102)
Q Consensus 39 ~aVyVG~~e~kRfvVp~~~L~hP~F~~LL~~aeEEfG~~ 77 (102)
+.||.|.. -...++|++.-|+|+|..
T Consensus 2 ~~vy~~~~-------------~~~~~~l~~~Fek~tGIk 27 (308)
T d1nnfa_ 2 ITVYNGQQ-------------KEAATAVAKAFEQETGIK 27 (308)
T ss_dssp EEEEECSC-------------HHHHHHHHHHHHHHSCCC
T ss_pred EEEEeCCC-------------HHHHHHHHHHHHHhhCCE
Confidence 57888763 458889999999998864
No 27
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=20.13 E-value=8.3 Score=23.40 Aligned_cols=57 Identities=18% Similarity=0.239 Sum_probs=39.4
Q ss_pred eEEEEeeCCceeEEEEeecccCc-H--HHHHHHHHHHhhcCCCCCCCceeeeCcHHHHHHHHHhhh
Q 040912 38 HIAIYVGEGYRKRFVIPISYLNH-P--LFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLN 100 (102)
Q Consensus 38 ~~aVyVG~~e~kRfvVp~~~L~h-P--~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~vl~~l~ 100 (102)
.+.+=||. ++|.+..+-|.. | .|..+ ++....++.++|.+-|--+...|++||..+.
T Consensus 3 rI~LNVGG---~~F~t~~~tL~~~~~s~l~~~---~~~~~~~~~~~~~~fiDRdp~~F~~IL~ylR 62 (103)
T d3kvta_ 3 RVIINVGG---IRHETYKATLKKIPATRLSRL---TEGMLNYDPVLNEYFFDRHPGVFAQIINYYR 62 (103)
T ss_dssp EEEEEETT---EEEEEEHHHHTTSCSSTTTTC---CTTSTTEETTTTEEEECSCTTTHHHHHHHHH
T ss_pred EEEEEECC---EEEEEeHHHHhhCccchhHHH---HcCCCccCCCCCcEEecCCHHHHHHHHHHHc
Confidence 35566773 699998887763 4 23222 2333344546789999999999999998764
Done!