BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040914
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
SV=1
Length = 127
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 7/91 (7%)
Query: 41 NLAARLEDSRSLTECWNALMELKLCSNEIIIFFLNGQADIGPDCCRTIDIITRNCWPTML 100
N+AARL+ S L ECWNAL ELK C+NEI++FFLNG+ +G CC ++DIIT NCWP ML
Sbjct: 35 NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93
Query: 101 TSLGFTAEERNLLRGYC------DASSAPSP 125
TSLGFT EE N+LRG+C D+S APSP
Sbjct: 94 TSLGFTPEEANVLRGFCQNPNSGDSSPAPSP 124
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
SV=1
Length = 125
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 41 NLAARLEDSRSLTECWNALMELKLCSNEIIIFFLNGQADIGPDCCRTIDIITRNCWPTML 100
N+AARL + L ECWNAL ELK C+NEI++FFLNG+ +G DCC+ +++IT +CWP ML
Sbjct: 33 NIAARL-NGGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAML 91
Query: 101 TSLGFTAEERNLLRGYCDA 119
TSLGFT++E N+LRG+C +
Sbjct: 92 TSLGFTSDETNVLRGFCQS 110
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2
SV=1
Length = 125
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 66/99 (66%), Gaps = 4/99 (4%)
Query: 36 IKPGNNLAARLEDSRSLTECWNALMELKLCSNEIIIFFLNGQADIGPDCCRTIDIITRNC 95
+ N+AARL L +CW+AL ELK C+NEI++FFLNG+ +G CC +D+IT +C
Sbjct: 28 VADSTNIAARLTGG-GLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDC 86
Query: 96 WPTMLTSLGFTAEERNLLRGYCDASSAPSPGGPEVTYEP 134
WP MLTSLGFT EE N+LRG+C +P+ GG P
Sbjct: 87 WPAMLTSLGFTLEETNVLRGFCQ---SPNSGGSSPALSP 122
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
SV=1
Length = 158
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 65/111 (58%)
Query: 9 FFILALTCLIMTNIANATSRNDNLNNNIKPGNNLAARLEDSRSLTECWNALMELKLCSNE 68
F I+ L ++ ++ A P +L RL+ CW++LM+L+ CS E
Sbjct: 11 FNIVTLMLMVASSTVTARPLMKPSMGTSSPTTSLVYRLKLDEDTGYCWDSLMQLQHCSGE 70
Query: 69 IIIFFLNGQADIGPDCCRTIDIITRNCWPTMLTSLGFTAEERNLLRGYCDA 119
+I+FFLNG+ IGP CC I I R CWPTM+ LGFTA+E ++L+GYCD
Sbjct: 71 LILFFLNGETYIGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDMLQGYCDG 121
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2
SV=1
Length = 155
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 40 NNLAARLEDSRSLTECWNALMELKLCSNEIIIFFLNG--------QADIGPDCCRTIDII 91
+A + +L +CWNA +ELK C++EI+ FFL+ + I DCC I ++
Sbjct: 38 TKMATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLV 97
Query: 92 TRNCWPTMLTSLGFTAEERNLLRGYCDASS-----APSPGGPEVTYEP 134
++CW M TSLG T E N LR YC+ + +PSP + P
Sbjct: 98 VKDCWSVMFTSLGLTTMEGNNLREYCEFQAEKSELSPSPAPETLALSP 145
>sp|O14057|GUAD_SCHPO Probable guanine deaminase OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPCC1672.03c PE=3 SV=1
Length = 527
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 79 DIGPDCCRTIDIITRNCWPTMLTSLGFTAEERNL 112
D+ + +DI R+ WP ML+ FT+++RNL
Sbjct: 401 DLSAETHSCVDIFERDTWPVMLSKWVFTSDDRNL 434
>sp|O08628|PCOC1_RAT Procollagen C-endopeptidase enhancer 1 OS=Rattus norvegicus
GN=Pcolce PE=2 SV=1
Length = 468
Score = 32.7 bits (73), Expect = 0.68, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 100 LTSLGFTAEERNLLRGYCDASSAPSPG-----GPEVTYEPQT 136
+T+ GF+A R L R + SAPSPG GP+ +P+T
Sbjct: 260 VTADGFSASYRTLPRDAVEKESAPSPGEDAQHGPQSRSDPKT 301
>sp|Q47BL9|OTC_DECAR Ornithine carbamoyltransferase OS=Dechloromonas aromatica (strain
RCB) GN=argF PE=3 SV=1
Length = 306
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 83 DCCRTIDIITRNCWPTMLTSLGFTAEERNLLRGYCD 118
D CR D++T + W TS+GF AE ++ + D
Sbjct: 209 DACRGADLVTTDVW----TSMGFEAENEERIKAFAD 240
>sp|P27040|AVR2B_MOUSE Activin receptor type-2B OS=Mus musculus GN=Acvr2b PE=1 SV=1
Length = 536
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 12/60 (20%)
Query: 87 TIDIITRNCWPTMLTSLG---FTAEERNLLRGYC---------DASSAPSPGGPEVTYEP 134
TI+++ + CW A E N +C + P PGGPEVTYEP
Sbjct: 69 TIELVKKGCWLDDFNCYDRQECVATEENPQVYFCCCEGNFCNERFTHLPEPGGPEVTYEP 128
>sp|P38445|AVR2B_RAT Activin receptor type-2B OS=Rattus norvegicus GN=Acvr2b PE=1 SV=3
Length = 513
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 11/12 (91%), Positives = 11/12 (91%)
Query: 123 PSPGGPEVTYEP 134
P PGGPEVTYEP
Sbjct: 117 PEPGGPEVTYEP 128
>sp|Q55E65|Y0496_DICDI Putative uncharacterized protein DDB_G0270496 OS=Dictyostelium
discoideum GN=DDB_G0270496 PE=3 SV=2
Length = 523
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 15 TCLIMTNIANATSRNDNLNNNIKPGNNLAARLEDSRSLTECWNALME 61
+CL+++ + N S +LN+ I R+ +SL+E WN + E
Sbjct: 283 SCLLISELYNLQSELIDLNDEIPKQQQSKKRIRPDQSLSEIWNTIEE 329
>sp|A1K7J9|OTC_AZOSB Ornithine carbamoyltransferase OS=Azoarcus sp. (strain BH72)
GN=arcB PE=3 SV=1
Length = 311
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 83 DCCRTIDIITRNCWPTMLTSLGFTAEERNLLRGYCD 118
+ CR D++T + W TS+GF AE ++ + D
Sbjct: 210 EACRGADLVTTDVW----TSMGFEAENEARMKAFAD 241
>sp|A0JM98|TDRD5_XENTR Tudor domain-containing protein 5 OS=Xenopus tropicalis GN=tdrd5
PE=2 SV=1
Length = 963
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 16/64 (25%)
Query: 36 IKPGNNLAARLEDSRSLTECWNALMELKLCSNEIIIFFLNGQADIGPDCCRTIDIITRNC 95
+KP + +++++ + W +ELKLCS E Q DI PD R + +C
Sbjct: 484 VKPVGTIFSKVDE-----KLWWGPLELKLCSTE--------QIDIPPDAVRNQKL---HC 527
Query: 96 WPTM 99
P+M
Sbjct: 528 LPSM 531
>sp|Q4L4Y2|ADDB_STAHJ ATP-dependent helicase/deoxyribonuclease subunit B OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=addB PE=3 SV=1
Length = 1162
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 34/72 (47%)
Query: 3 MTLKHVFFILALTCLIMTNIANATSRNDNLNNNIKPGNNLAARLEDSRSLTECWNALMEL 62
+ LK V++ + + +IA ++ L+N IKPG L + D R + W L +
Sbjct: 955 LDLKKVYYGKQMQMMTYMDIALQNAQRLGLSNEIKPGGLLYFHVHDERLSFKDWGELEDD 1014
Query: 63 KLCSNEIIIFFL 74
L +++ FL
Sbjct: 1015 ALTQDKLEQAFL 1026
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,074,446
Number of Sequences: 539616
Number of extensions: 1797067
Number of successful extensions: 17651
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 17461
Number of HSP's gapped (non-prelim): 239
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)